BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001952
(992 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 158/347 (45%), Gaps = 82/347 (23%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F L+ LG G G V L + T +A+K++ E + + ++ TE +L+
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R+ + FSE ARFY AE++ A
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSA 260
Query: 724 LEYLH-MLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
L+YLH V+YRDLK EN+++ +DGHI +TDF L
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------------------------- 295
Query: 783 CTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNS 842
C + T + C +P +L P+++ + R+
Sbjct: 296 -----CKEGIKDGATMKTFCGTPEYLA-------------------PEVLEDNDYGRAVD 331
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
+ G G+ +YE++ GR PF +E+ ++M+ ++F
Sbjct: 332 WWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 368
Query: 903 PDSPLISFQARDLIRGLLIKEPENRL-GSQKGAAEIKQHPFFEGLNW 948
P + + +A+ L+ GLL K+P+ RL G + A EI QH FF G+ W
Sbjct: 369 PRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 413
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 158/347 (45%), Gaps = 82/347 (23%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F L+ LG G G V L + T +A+K++ E + + ++ TE +L+
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R+ + FSE ARFY AE++ A
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSA 263
Query: 724 LEYLH-MLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
L+YLH V+YRDLK EN+++ +DGHI +TDF L
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL------------------------- 298
Query: 783 CTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNS 842
C + T + C +P +L P+++ + R+
Sbjct: 299 -----CKEGIKDGATMKTFCGTPEYLA-------------------PEVLEDNDYGRAVD 334
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
+ G G+ +YE++ GR PF +E+ ++M+ ++F
Sbjct: 335 WWG-----------------------LGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRF 371
Query: 903 PDSPLISFQARDLIRGLLIKEPENRL-GSQKGAAEIKQHPFFEGLNW 948
P + + +A+ L+ GLL K+P+ RL G + A EI QH FF G+ W
Sbjct: 372 PRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 416
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 98/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF L+ R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
+A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T FA+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 123 bits (308), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/164 (42%), Positives = 104/164 (63%), Gaps = 6/164 (3%)
Query: 598 HVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELI-GTNC--LFAIKVMDNEFLARRKKMP 654
HV+ + F LL+ LG G G V+L + I G++ L+A+KV+ L R ++
Sbjct: 14 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV- 72
Query: 655 RAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAAR 714
R + ER+IL ++HPF+ L+ F ++ L++++ GGDL K++ F+E +
Sbjct: 73 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVK 130
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
FY+AE+ LAL++LH LG+IYRDLKPENIL+ E+GHI LTDF LS
Sbjct: 131 FYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Score = 103 bits (256), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
+ ++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G +ET+ ++
Sbjct: 181 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 240
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEGLNW-ALIRCA 954
L P +S +A+ L+R L + P NRLG+ G EIK+H FF ++W L R
Sbjct: 241 KAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 298
Query: 955 I-PPELP 960
I PP P
Sbjct: 299 IHPPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 123 bits (308), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/164 (42%), Positives = 104/164 (63%), Gaps = 6/164 (3%)
Query: 598 HVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELI-GTNC--LFAIKVMDNEFLARRKKMP 654
HV+ + F LL+ LG G G V+L + I G++ L+A+KV+ L R ++
Sbjct: 13 HVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV- 71
Query: 655 RAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAAR 714
R + ER+IL ++HPF+ L+ F ++ L++++ GGDL K++ F+E +
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVK 129
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
FY+AE+ LAL++LH LG+IYRDLKPENIL+ E+GHI LTDF LS
Sbjct: 130 FYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 102 bits (255), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
+ ++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G +ET+ ++
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEGLNW-ALIRCA 954
L P +S +A+ L+R L + P NRLG+ G EIK+H FF ++W L R
Sbjct: 240 KAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297
Query: 955 I-PPELP 960
I PP P
Sbjct: 298 IHPPFKP 304
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T FA+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 98/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF L+ R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
+A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T FA+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 122 bits (307), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 122 bits (307), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 141
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 142 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ + GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 173 FAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 232
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 233 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 290
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 291 IYQRKVEAPFIPKF 304
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 122 bits (305), Expect = 1e-27, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 7/176 (3%)
Query: 587 MSADVRWEAI-RHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELI-GTNC--LFAIKVM 642
M ++ AI HV+ + F LL+ LG G G V+L + I G++ L+A+KV+
Sbjct: 1 MEGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL 60
Query: 643 DNEFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQK 702
L R ++ R + ER+IL ++HPF+ L+ F ++ L++++ GGDL K
Sbjct: 61 KKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK 119
Query: 703 QLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ F+E +FY+AE+ LAL++LH LG+IYRDLKPENIL+ E+GHI LTDF LS
Sbjct: 120 EV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
+ ++ SF GT EY+APE++ GH + DWW+FG+ ++E+L G PF+G +ET+ ++
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL 239
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEGLNW-ALIRCA 954
L P +S +A+ L+R L + P NRLG+ G EIK+H FF ++W L R
Sbjct: 240 KAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297
Query: 955 I-PPELP 960
I PP P
Sbjct: 298 IHPPFKP 304
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 97/156 (62%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ +G G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGGD+ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I + DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 176
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 268 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 326 IYQRKVEAPFIPKF 339
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +I H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 3/148 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL-RMLDHP 669
F+ L+ +G G G V LA +A+KV+ + + ++K+ +ER +L + + HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
FL L+ F + + V++Y GG+L Q++ +CF EP ARFY AE+ AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS 157
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDL 757
L ++YRDLKPENIL+ GHI+LTDF L
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGL 185
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 69/122 (56%), Gaps = 3/122 (2%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
++ +++F GT EYLAPE++ + + VDWW G LYE+LYG PF E N++
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNW-ALIRCAI 955
+ L+ P I+ AR L+ GLL K+ RLG++ EIK H FF +NW LI I
Sbjct: 253 NKPLQL--KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKI 310
Query: 956 PP 957
P
Sbjct: 311 TP 312
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ +G G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGGD+ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I + DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 120 bits (302), Expect = 3e-27, Method: Composition-based stats.
Identities = 65/152 (42%), Positives = 97/152 (63%), Gaps = 6/152 (3%)
Query: 610 HFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
HF LL+ LG G G V+L + + L+A+KV+ L R ++ R + ER+IL +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILADV 87
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+HPF+ L+ F ++ L++++ GGDL K++ F+E +FY+AE+ L L++
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLDH 145
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
LH LG+IYRDLKPENIL+ E+GHI LTDF LS
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Score = 104 bits (260), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
+ ++ SF GT EY+APE++ +GH + DWW++G+ ++E+L G PF+G +ET+ ++
Sbjct: 184 EKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLIL 243
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEGLNW-ALIRCA 954
L P +S +A+ L+R L + P NRLGS GA EIK+H F+ ++W L R
Sbjct: 244 KAKLGMPQ--FLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRRE 301
Query: 955 IPP 957
I P
Sbjct: 302 IKP 304
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 148
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 240 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 298 IYQRKVEAPFIPKF 311
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 120 bits (300), Expect = 4e-27, Method: Composition-based stats.
Identities = 61/151 (40%), Positives = 90/151 (59%), Gaps = 2/151 (1%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ F +L+ LG G G V+L +A+KV+ E + R K++ ER +L ++
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
HPF+ ++ F ++M+Y GG+L L +K + F P A+FY AEV LALEYL
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYL 122
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H +IYRDLKPENIL+ ++GHI +TDF +
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFA 153
Score = 89.7 bits (221), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 65/105 (61%), Gaps = 3/105 (2%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT +Y+APE++ + + ++DWW+FGI +YE+L G TPF S +T ++ L+FP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 905 SPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEGLNW 948
P + +DL+ L+ ++ RLG+ Q G ++K HP+F+ + W
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW 267
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ +G G G V L + + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I + DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T +A+K++D + + + K++ E+ IL+ ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY PGG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 148
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 180 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 239
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 240 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 297
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 298 IYQRKVEAPFIPKF 311
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 7/156 (4%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+GL+ F+LL+ +G G V L L T+ ++A+KV+ E + + + QTE+ +
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 665 ML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVL 721
+HPFL L+S F +++ V+EY GGDL H+ RQ++L E ARFY AE+
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL----PEEHARFYSAEIS 131
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LAL YLH G+IYRDLK +N+L+ +GHI LTD+ +
Sbjct: 132 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 84/140 (60%), Gaps = 16/140 (11%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGN------ 888
P D S F GT Y+APEI++GE +G +VDWW G+ ++E++ GR+PF G+
Sbjct: 174 PGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
Query: 889 --EETLANVVMQS-LKFPDSPLISFQARDLIRGLLIKEPENRLGS--QKGAAEIKQHPFF 943
E+ L V+++ ++ P S +S +A +++ L K+P+ RLG Q G A+I+ HPFF
Sbjct: 233 NTEDYLFQVILEKQIRIPRS--MSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF 290
Query: 944 EGLNWALI--RCAIPPELPD 961
++W ++ + +PP P+
Sbjct: 291 RNVDWDMMEQKQVVPPFKPN 310
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT E LAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 142
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ E G+I +TDF + R
Sbjct: 143 YLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 174 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 233
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 234 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 291
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 292 IYQRKVEAPFIPKF 305
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAP II +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +Y++ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 176
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT EYLAPEII +G+ AVDWW G+ +YE+ G PF + +V ++FP
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 905 SPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWALI--RCAIPPELPD 961
S +DL+R LL + R G+ K G +IK H +F +W I R P +P
Sbjct: 281 H--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 338
Query: 962 F 962
F
Sbjct: 339 F 339
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 97/156 (62%), Gaps = 7/156 (4%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+GL+ F+LL+ +G G V L L T+ ++A++V+ E + + + QTE+ +
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 665 ML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVL 721
+HPFL L+S F +++ V+EY GGDL H+ RQ++L E ARFY AE+
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL----PEEHARFYSAEIS 163
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LAL YLH G+IYRDLK +N+L+ +GHI LTD+ +
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 85/140 (60%), Gaps = 16/140 (11%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGN------ 888
P D S +F GT Y+APEI++GE +G +VDWW G+ ++E++ GR+PF G+
Sbjct: 206 PGDTTS-TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
Query: 889 --EETLANVVMQS-LKFPDSPLISFQARDLIRGLLIKEPENRLGS--QKGAAEIKQHPFF 943
E+ L V+++ ++ P S +S +A +++ L K+P+ RLG Q G A+I+ HPFF
Sbjct: 265 NTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322
Query: 944 EGLNWALI--RCAIPPELPD 961
++W ++ + +PP P+
Sbjct: 323 RNVDWDMMEQKQVVPPFKPN 342
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 97/156 (62%), Gaps = 7/156 (4%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+GL+ F+LL+ +G G V L L T+ ++A+KV+ E + + + QTE+ +
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 665 ML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVL 721
+HPFL L+S F +++ V+EY GGDL H+ RQ++L E ARFY AE+
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL----PEEHARFYSAEIS 116
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LAL YLH G+IYRDLK +N+L+ +GHI LTD+ +
Sbjct: 117 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 152
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 84/140 (60%), Gaps = 16/140 (11%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGN------ 888
P D S F GT Y+APEI++GE +G +VDWW G+ ++E++ GR+PF G+
Sbjct: 159 PGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
Query: 889 --EETLANVVMQS-LKFPDSPLISFQARDLIRGLLIKEPENRLGS--QKGAAEIKQHPFF 943
E+ L V+++ ++ P S +S +A +++ L K+P+ RLG Q G A+I+ HPFF
Sbjct: 218 NTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 275
Query: 944 EGLNWALI--RCAIPPELPD 961
++W ++ + +PP P+
Sbjct: 276 RNVDWDMMEQKQVVPPFKPN 295
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+++ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 96/156 (61%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ F+EP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FAEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 116 bits (291), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+ A
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 303 HQQTPPKL 310
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 176
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 208 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 267
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 268 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 325
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 326 IYQRKVEAPFIPKF 339
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N+FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 183 ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 243 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 301 HQQTPPKL 308
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+NSFVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 186 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 246 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 304 HQQTPPKL 311
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+ A
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 303 HQQTPPKL 310
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 303 HQQTPPKL 310
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 246 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 303
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 304 HQQTPPKL 311
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDF 179
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+ +GNE +
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-AGNEYLIF 246
Query: 894 NVVMQSLKFPDSPLISF-QARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWAL 950
+++ L++ D P F +ARDL+ LL+ + RLG + +G +K HPFFE + W
Sbjct: 247 QKIIK-LEY-DFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 304
Query: 951 IRCAIPPEL 959
+ PP+L
Sbjct: 305 LHQQTPPKL 313
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 243 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 301 HQQTPPKL 308
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 243 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 301 HQQTPPKL 308
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 303 HQQTPPKL 310
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 303 HQQTPPKL 310
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 115 bits (289), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 96/155 (61%), Gaps = 7/155 (4%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+GL+ F+LL+ +G G V L L T+ ++A+KV+ E + + + QTE+ +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 666 L-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLL 722
+HPFL L+S F +++ V+EY GGDL H+ RQ++L E ARFY AE+ L
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL----PEEHARFYSAEISL 121
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
AL YLH G+IYRDLK +N+L+ +GHI LTD+ +
Sbjct: 122 ALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 84/140 (60%), Gaps = 16/140 (11%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGN------ 888
P D S F GT Y+APEI++GE +G +VDWW G+ ++E++ GR+PF G+
Sbjct: 163 PGDTTS-XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
Query: 889 --EETLANVVMQS-LKFPDSPLISFQARDLIRGLLIKEPENRLGS--QKGAAEIKQHPFF 943
E+ L V+++ ++ P S +S +A +++ L K+P+ RLG Q G A+I+ HPFF
Sbjct: 222 NTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279
Query: 944 EGLNWALI--RCAIPPELPD 961
++W ++ + +PP P+
Sbjct: 280 RNVDWDMMEQKQVVPPFKPN 299
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 155
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 187 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 247 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 304
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 305 IYQRKVEAPFIPKF 318
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDF 153
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 831 LVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
L E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 159 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
Query: 891 TLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNW 948
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W
Sbjct: 219 IFQKIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 276
Query: 949 ALIRCAIPPE 958
+ PP+
Sbjct: 277 ENLHQQTPPK 286
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDF 154
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 831 LVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
L E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 160 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 219
Query: 891 TLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNW 948
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W
Sbjct: 220 IFQKIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 277
Query: 949 ALIRCAIPPEL 959
+ PP+L
Sbjct: 278 ENLHQQTPPKL 288
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F+ ++ LG G G V L + + +A+K++D + + + K++ E+ IL+ ++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +VMEY GG++ H+ R +G+ F EP ARFY A+++L E
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGR-FXEPHARFYAAQIVLTFE 150
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I +TDF + R
Sbjct: 151 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 182 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 241
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 242 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 299
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 300 IYQRKVEAPFIPKF 313
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDF 151
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 219
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 220 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 277
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 278 HQQTPPKL 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDF 152
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 220
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 221 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 278
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 279 HQQTPPKL 286
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+NSFVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 242 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 300 HQQTPPKL 307
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 242 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 299
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 300 HQQTPPKL 307
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 94/156 (60%), Gaps = 6/156 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F ++ LG G G V L + T +A+K++D + + + K++ E+ I + ++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
PFL L F ++ +V+EY PGG++ H+ R +G+ FSEP ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR---IGR-FSEPHARFYAAQIVLTFE 156
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC 761
YLH L +IYRDLKPEN+L+ + G+I + DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 5/134 (3%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET 891
A+ R+ GT EYLAPEII +G+ AVDWW G+ +YE+ G PF +
Sbjct: 188 FAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 247
Query: 892 LANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQK-GAAEIKQHPFFEGLNWAL 950
+V ++FP S +DL+R LL + R G+ K G +IK H +F +W
Sbjct: 248 YEKIVSGKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIA 305
Query: 951 I--RCAIPPELPDF 962
I R P +P F
Sbjct: 306 IYQRKVEAPFIPKF 319
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDF 181
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 249
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 250 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 307
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 308 HQQTPPKL 315
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 114 bits (286), Expect = 2e-25, Method: Composition-based stats.
Identities = 60/145 (41%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDF 158
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 831 LVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
L E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 164 LSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 223
Query: 891 TLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNW 948
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W
Sbjct: 224 IFQKIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 281
Query: 949 ALIRCAIPPEL 959
+ PP+L
Sbjct: 282 ENLHQQTPPKL 292
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 99/159 (62%), Gaps = 9/159 (5%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIG---TNCLFAIKVMDNEFLARRKKM-PRAQTERE 661
+G+ +F LL+ LG G G V+L I T L+A+KV+ + ++ K +TER+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 662 ILRMLDH-PFLPTLYSQFTSDNLSCLVMEYCPGGDLHV-LRQKQLGKCFSEPAARFYVAE 719
+L + PFL TL+ F ++ L+++Y GG+L L Q++ F+E + YV E
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGE 167
Query: 720 VLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++LALE+LH LG+IYRD+K ENIL+ +GH++LTDF LS
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 81/126 (64%), Gaps = 10/126 (7%)
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKG--EGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
+ VA+ T+ R+ F GT EY+AP+I++G GH AVDWW+ G+ +YELL G +PF G
Sbjct: 208 EFVADETE-RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
Query: 888 NEETLANVVMQSLK----FPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPF 942
+ + A + + LK +P +S A+DLI+ LL+K+P+ RLG + A EIK+H F
Sbjct: 267 EKNSQAEISRRILKSEPPYPQE--MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
Query: 943 FEGLNW 948
F+ +NW
Sbjct: 325 FQKINW 330
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G TV LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G L L+ + F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+NSFVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 245 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 303 HQQTPPKL 310
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G T LA + T+ +AIK+++ + + K+P ER+++ LDHPF
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY F D + Y G+L L+ + F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGEL--LKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RDLKPENIL+ ED HI +TDF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 834 EPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
E AR+N FVGT +Y++PE++ + + D W G +Y+L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 894 NVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ--KGAAEIKQHPFFEGLNWALI 951
++ FP+ +ARDL+ LL+ + RLG + +G +K HPFFE + W +
Sbjct: 243 KIIKLEYDFPEKFFP--KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 300
Query: 952 RCAIPPEL 959
PP+L
Sbjct: 301 HQQTPPKL 308
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 114 bits (284), Expect = 4e-25, Method: Composition-based stats.
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F+ L+ LG G G V L T +A+K++ E + + ++ TE +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R++ F+E ARFY AE++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSA 117
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LEYLH V+YRD+K EN+++ +DGHI +TDF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 101 bits (251), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A +F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E ++M
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRL-GSQKGAAEIKQHPFFEGLNWALI--RCA 954
+ ++FP + +S +A+ L+ GLL K+P+ RL G A E+ +H FF +NW + +
Sbjct: 220 EEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 277
Query: 955 IPPELP 960
+PP P
Sbjct: 278 LPPFKP 283
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 604 GSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL 663
+ + F+ L+ LG G G V L T +A+K++ E + + ++ TE +L
Sbjct: 3 AKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 664 RMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVL 721
+ HPFL L F + + C VMEY GG+L H+ R++ F+E ARFY AE++
Sbjct: 63 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIV 118
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
ALEYLH V+YRD+K EN+++ +DGHI +TDF L
Sbjct: 119 SALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 154
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A +F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E ++M
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 222
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNWALI--RCA 954
+ ++FP + +S +A+ L+ GLL K+P+ RLG A E+ +H FF +NW + +
Sbjct: 223 EEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 280
Query: 955 IPPELP 960
+PP P
Sbjct: 281 LPPFKP 286
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F+ L+ LG G G V L T +A+K++ E + + ++ TE +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R++ F+E ARFY AE++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSA 117
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LEYLH V+YRD+K EN+++ +DGHI +TDF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A +F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E ++M
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNWALI--RCA 954
+ ++FP + +S +A+ L+ GLL K+P+ RLG A E+ +H FF +NW + +
Sbjct: 220 EEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 277
Query: 955 IPPELP 960
+PP P
Sbjct: 278 LPPFKP 283
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F+ L+ LG G G V L T +A+K++ E + + ++ TE +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R++ F+E ARFY AE++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSA 117
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LEYLH V+YRD+K EN+++ +DGHI +TDF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E ++M
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNWALI--RCA 954
+ ++FP + +S +A+ L+ GLL K+P+ RLG A E+ +H FF +NW + +
Sbjct: 220 EEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 277
Query: 955 IPPELP 960
+PP P
Sbjct: 278 LPPFKP 283
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 91/153 (59%), Gaps = 3/153 (1%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ L FN L LG G G V LA+ GT L+AIK++ + + + + E+ +L +
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 666 LDHP-FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
LD P FL L+S F + + VMEY GGDL + +Q+GK F EP A FY AE+ + L
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL-MYHIQQVGK-FKEPQAVFYAAEISIGL 133
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+LH G+IYRDLK +N+++ +GHI + DF +
Sbjct: 134 FFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGM 166
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+ F GT +Y+APEII + +G +VDWW +G+ LYE+L G+ PF G +E +++ +
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN 236
Query: 900 LKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNW 948
+ +P S +S +A + +GL+ K P RLG +G ++++H FF ++W
Sbjct: 237 VSYPKS--LSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDW 284
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F+ L+ LG G G V L T +A+K++ E + + ++ TE +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R++ F+E ARFY AE++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSA 117
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LEYLH V+YRD+K EN+++ +DGHI +TDF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E ++M
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNWALI--RCA 954
+ ++FP + +S +A+ L+ GLL K+P+ RLG A E+ +H FF +NW + +
Sbjct: 220 EEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 277
Query: 955 IPPELP 960
+PP P
Sbjct: 278 LPPFKP 283
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 112 bits (281), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F+ L+ LG G G V L T +A+K++ E + + ++ TE +L+
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R++ F+E ARFY AE++ A
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSA 122
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LEYLH V+YRD+K EN+++ +DGHI +TDF L
Sbjct: 123 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 156
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E ++M
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 224
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNWALI--RCA 954
+ ++FP + +S +A+ L+ GLL K+P+ RLG A E+ +H FF +NW + +
Sbjct: 225 EEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 282
Query: 955 IPPELP 960
+PP P
Sbjct: 283 LPPFKP 288
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 6/154 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F+ L+ LG G G V L T +A+K++ E + + ++ TE +L+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R++ F+E ARFY AE++ A
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSA 117
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LEYLH V+YRD+K EN+++ +DGHI +TDF L
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E ++M
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNWALI--RCA 954
+ ++FP + +S +A+ L+ GLL K+P+ RLG A E+ +H FF +NW + +
Sbjct: 220 EEIRFPRT--LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKL 277
Query: 955 IPPELP 960
+PP P
Sbjct: 278 LPPFKP 283
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F L+ LG G G V L + T +A+K++ E + + ++ TE +L+
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R+ + FSE ARFY AE++ A
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSA 120
Query: 724 LEYLH-MLGVIYRDLKPENILVREDGHIMLTDFDL 757
L+YLH V+YRDLK EN+++ +DGHI +TDF L
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E+ ++M
Sbjct: 164 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 223
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRL-GSQKGAAEIKQHPFFEGLNW 948
+ ++FP + + +A+ L+ GLL K+P+ RL G + A EI QH FF G+ W
Sbjct: 224 EEIRFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 273
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F L+ LG G G V L + T +A+K++ E + + ++ TE +L+
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R+ + FSE ARFY AE++ A
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSA 121
Query: 724 LEYLH-MLGVIYRDLKPENILVREDGHIMLTDFDL 757
L+YLH V+YRDLK EN+++ +DGHI +TDF L
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E+ ++M
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 224
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRL-GSQKGAAEIKQHPFFEGLNW 948
+ ++FP + + +A+ L+ GLL K+P+ RL G + A EI QH FF G+ W
Sbjct: 225 EEIRFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 274
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F L+ LG G G V L + T +A+K++ E + + ++ TE +L+
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
HPFL L F + + C VMEY GG+L H+ R+ + FSE ARFY AE++ A
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSA 122
Query: 724 LEYLH-MLGVIYRDLKPENILVREDGHIMLTDFDL 757
L+YLH V+YRDLK EN+++ +DGHI +TDF L
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A F GT EYLAPE+++ +G AVDWW G+ +YE++ GR PF +E+ ++M
Sbjct: 166 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 225
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRL-GSQKGAAEIKQHPFFEGLNW 948
+ ++FP + + +A+ L+ GLL K+P+ RL G + A EI QH FF G+ W
Sbjct: 226 EEIRFPRT--LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 275
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 611 FNLLQKLGCGDIGTVY-LAELIGTNC--LFAIKVMDNEFLARR-KKMPRAQTEREILRML 666
F LL+ LG G G V+ + ++ G N +FA+KV+ + R K + ER IL +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HPF+ L F + L++EY GG+L + +++ F E A FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGH 136
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LH G+IYRDLKPENI++ GH+ LTDF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 75/124 (60%), Gaps = 5/124 (4%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+++F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G ++T+ ++
Sbjct: 178 THTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 900 LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKG-AAEIKQHPFFEGLNWA--LIRCAIP 956
L P P ++ +ARDL++ LL + +RLG+ G A E++ HPFF +NW L R P
Sbjct: 238 LNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEP 295
Query: 957 PELP 960
P P
Sbjct: 296 PFKP 299
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 611 FNLLQKLGCGDIGTVY-LAELIGTNC--LFAIKVMDNEFLARR-KKMPRAQTEREILRML 666
F LL+ LG G G V+ + ++ G N +FA+KV+ + R K + ER IL +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HPF+ L F + L++EY GG+L + +++ F E A FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGH 136
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LH G+IYRDLKPENI++ GH+ LTDF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
++ F GT EY+APEI+ GH AVDWW+ G +Y++L G PF G ++T+ ++
Sbjct: 178 THXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK 237
Query: 900 LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKG-AAEIKQHPFFEGLNWA--LIRCAIP 956
L P P ++ +ARDL++ LL + +RLG+ G A E++ HPFF +NW L R P
Sbjct: 238 LNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEP 295
Query: 957 PELP 960
P P
Sbjct: 296 PFKP 299
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 78/122 (63%), Gaps = 6/122 (4%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
DA++N F GT +Y+APEI+ G+ + +VDWW+FG+ LYE+L G++PF G EE ++
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNW-ALIRCAI 955
M + +P + +A+DL+ L ++EPE RLG + +I+QHP F +NW L R I
Sbjct: 233 MDNPFYP--RWLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 287
Query: 956 PP 957
P
Sbjct: 288 DP 289
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
+ + F L + LG G G V+LAE TN FAIK + + + + E+ +L
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 665 M-LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLA 723
+ +HPFL ++ F + VMEY GGDL + Q F A FY AE++L
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILG 131
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDF 755
L++LH G++YRDLK +NIL+ +DGHI + DF
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADF 163
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 78/122 (63%), Gaps = 6/122 (4%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
DA++N F GT +Y+APEI+ G+ + +VDWW+FG+ LYE+L G++PF G EE ++
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNW-ALIRCAI 955
M + +P + +A+DL+ L ++EPE RLG + +I+QHP F +NW L R I
Sbjct: 232 MDNPFYP--RWLEKEAKDLLVKLFVREPEKRLGVR---GDIRQHPLFREINWEELERKEI 286
Query: 956 PP 957
P
Sbjct: 287 DP 288
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
+ + F L + LG G G V+LAE TN FAIK + + + + E+ +L
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 665 M-LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLA 723
+ +HPFL ++ F + VMEY GGDL + Q F A FY AE++L
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILG 130
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDF 755
L++LH G++YRDLK +NIL+ +DGHI + DF
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGHIKIADF 162
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+G+ +F ++ LG G G V LA + T L+A+KV+ + + + + TE+ IL +
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 666 L-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
+HPFL L+ F + + VME+ GGDL QK + F E ARFY AE++ AL
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISAL 137
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+LH G+IYRDLK +N+L+ +GH L DF +
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 170
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
Query: 842 SFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
+F GT +Y+APEI++ +G AVDWW G+ LYE+L G PF+ ++ ++ +
Sbjct: 183 TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV 242
Query: 902 FPDSPLISFQARDLIRGLLIKEPENRLGS--QKGAAEIKQHPFFEGLNWA 949
+P + A +++ + K P RLGS Q G I +HPFF+ ++WA
Sbjct: 243 YP--TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWA 290
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L FN L LG G G V L+E GT+ L+A+K++ + + + + E+ +L +
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 668 HP-FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
P FL L+S F + + VMEY GGDL + +Q+G+ F EP A FY AE+ + L +
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGR-FKEPHAVFYAAEIAIGLFF 457
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
L G+IYRDLK +N+++ +GHI + DF +
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+ F GT +Y+APEII + +G +VDWW FG+ LYE+L G+ PF+G +E +++ +
Sbjct: 499 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 558
Query: 900 LKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNW-ALIRCAIPP 957
+ +P S +S +A + +GL+ K P RLG +G +IK+H FF ++W L R I P
Sbjct: 559 VAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 616
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
+ HF +L+ +G G G V + + T ++A+K M+ + R ++ E +I++
Sbjct: 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HPFL L+ F + +V++ GGDL Q+ + F E + ++ E+++AL
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMAL 128
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+YL +I+RD+KP+NIL+ E GH+ +TDF+++
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 835 PTDARSNSFVGTHEYLAPEII---KGEGHGAAVDWWTFGIFLYELLYGRTPFK---GSGN 888
P + + + GT Y+APE+ KG G+ AVDWW+ G+ YELL GR P+ + +
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 889 EETLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNW 948
+E + + +P + S + L++ LL P+ R ++++ P+ +NW
Sbjct: 226 KEIVHTFETTVVTYPSA--WSQEMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINW 280
Query: 949 ALI--RCAIPPELPD 961
+ + IP +P+
Sbjct: 281 DAVFQKRLIPGFIPN 295
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 3/151 (1%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L FN L LG G G V L+E GT+ L+A+K++ + + + + E+ +L +
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 668 HP-FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
P FL L+S F + + VMEY GGDL + +Q+G+ F EP A FY AE+ + L +
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGR-FKEPHAVFYAAEIAIGLFF 136
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
L G+IYRDLK +N+++ +GHI + DF +
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+ F GT +Y+APEII + +G +VDWW FG+ LYE+L G+ PF+G +E +++ +
Sbjct: 178 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 237
Query: 900 LKFPDSPLISFQARDLIRGLLIKEPENRLGSQ-KGAAEIKQHPFFEGLNW-ALIRCAIPP 957
+ +P S +S +A + +GL+ K P RLG +G +IK+H FF ++W L R I P
Sbjct: 238 VAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQP 295
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 97/170 (57%), Gaps = 1/170 (0%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F +L+ +G G G V + +L + +FA+K+++ + +R + + ER++L D +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ TL+ F DN LVM+Y GGDL L K + E ARFY+AE+++A++ +H L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQL 194
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
++RD+KP+NIL+ +GHI L DF L+ T+ S + P +S
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 80/138 (57%), Gaps = 10/138 (7%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIK----GEG-HGAAVDWWTFGIFLYELLYGRTPFKGS 886
+ E +S+ VGT +Y++PEI++ G+G +G DWW+ G+ +YE+LYG TPF
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 887 GNEETLANVV--MQSLKFPDSPL-ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
ET ++ + +FP +S A+DLIR L+ E+RLG Q G + K+HPFF
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR-EHRLG-QNGIEDFKKHPFF 342
Query: 944 EGLNWALIRCAIPPELPD 961
G++W IR P +P+
Sbjct: 343 SGIDWDNIRNCEAPYIPE 360
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 97/172 (56%), Gaps = 6/172 (3%)
Query: 596 IRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR 655
++ VRLQ F +L+ +G G V + ++ T ++A+K+M+ + +R ++
Sbjct: 53 LKEVRLQRDD-----FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC 107
Query: 656 AQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF 715
+ ER++L D ++ L+ F +N LVMEY GGDL L K G+ ARF
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK-FGERIPAEMARF 166
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTL 767
Y+AE+++A++ +H LG ++RD+KP+NIL+ GHI L DF L+ T+
Sbjct: 167 YLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 81/151 (53%), Gaps = 15/151 (9%)
Query: 823 AQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAA-------VDWWTFGIFLYE 875
A S +L A+ T RS VGT +YL+PEI++ G G DWW G+F YE
Sbjct: 204 ADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYE 262
Query: 876 LLYGRTPFKGSGNEETLANVVMQ----SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQ 931
+ YG+TPF ET +V SL D + +ARD I+ LL PE RLG +
Sbjct: 263 MFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEG-VPEEARDFIQRLLCP-PETRLG-R 319
Query: 932 KGAAEIKQHPFFEGLNWALIRCAIPPELPDF 962
GA + + HPFF GL+W +R ++PP PDF
Sbjct: 320 GGAGDFRTHPFFFGLDWDGLRDSVPPFTPDF 350
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 24/191 (12%)
Query: 596 IRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR 655
IR +R++ + +++ +G G G V L T ++A+K++ + +R
Sbjct: 61 IRDLRMK-----AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 115
Query: 656 AQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF 715
ER+I+ + P++ L+ F D +VMEY PGGDL L E ARF
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARF 172
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSL--------RCS----- 762
Y AEV+LAL+ +H +G I+RD+KP+N+L+ + GH+ L DF + RC
Sbjct: 173 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 232
Query: 763 ---VSPTLLKS 770
+SP +LKS
Sbjct: 233 PDYISPEVLKS 243
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEG----HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
R ++ VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T +
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
Query: 894 NVV--MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWAL- 950
++ SL FPD IS +A++LI L + E RLG + G EIK+H FF+ WA
Sbjct: 284 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWE 341
Query: 951 -IRCAIPPELPD 961
+R + P +PD
Sbjct: 342 TLRDTVAPVVPD 353
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 24/191 (12%)
Query: 596 IRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR 655
IR +R++ + +++ +G G G V L T ++A+K++ + +R
Sbjct: 66 IRDLRMK-----AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 120
Query: 656 AQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF 715
ER+I+ + P++ L+ F D +VMEY PGGDL L E ARF
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARF 177
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSL--------RCS----- 762
Y AEV+LAL+ +H +G I+RD+KP+N+L+ + GH+ L DF + RC
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 763 ---VSPTLLKS 770
+SP +LKS
Sbjct: 238 PDYISPEVLKS 248
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEG----HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
R ++ VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T +
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 894 NVV--MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWAL- 950
++ SL FPD IS +A++LI L + E RLG + G EIK+H FF+ WA
Sbjct: 289 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWE 346
Query: 951 -IRCAIPPELPD 961
+R + P +PD
Sbjct: 347 TLRDTVAPVVPD 358
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 24/191 (12%)
Query: 596 IRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR 655
IR +R++ + +++ +G G G V L T ++A+K++ + +R
Sbjct: 66 IRDLRMK-----AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF 120
Query: 656 AQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF 715
ER+I+ + P++ L+ F D +VMEY PGGDL L E ARF
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARF 177
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSL--------RCS----- 762
Y AEV+LAL+ +H +G I+RD+KP+N+L+ + GH+ L DF + RC
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT 237
Query: 763 ---VSPTLLKS 770
+SP +LKS
Sbjct: 238 PDYISPEVLKS 248
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEG----HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
R ++ VGT +Y++PE++K +G +G DWW+ G+FLYE+L G TPF T +
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 894 NVV--MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWAL- 950
++ SL FPD IS +A++LI L + E RLG + G EIK+H FF+ WA
Sbjct: 289 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLG-RNGVEEIKRHLFFKNDQWAWE 346
Query: 951 -IRCAIPPELPD 961
+R + P +PD
Sbjct: 347 TLRDTVAPVVPD 358
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F +++ +G G G V + ++ T ++A+K+++ + +R + + ER++L D +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L+ F +N LVM+Y GGDL L K K E ARFY+ E++LA++ +H L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 210
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
++RD+KP+N+L+ +GHI L DF L+ + T+ S + P +S
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 260
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 838 ARSNSFVGTHEYLAPEIIK----GEG-HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
+S+ VGT +Y++PEI++ G G +G DWW+ G+ +YE+LYG TPF ET
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
Query: 893 ANVV--MQSLKFPDSPL-ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWA 949
++ + +FP +S +A+DLI+ L+ E RLG Q G + K+H FFEGLNW
Sbjct: 307 GKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSR-ERRLG-QNGIEDFKKHAFFEGLNWE 364
Query: 950 LIRCAIPPELPD 961
IR P +PD
Sbjct: 365 NIRNLEAPYIPD 376
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 96/170 (56%), Gaps = 1/170 (0%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F +++ +G G G V + ++ T ++A+K+++ + +R + + ER++L D +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L+ F +N LVM+Y GGDL L K K E ARFY+ E++LA++ +H L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 194
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
++RD+KP+N+L+ +GHI L DF L+ + T+ S + P +S
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 244
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 838 ARSNSFVGTHEYLAPEIIK----GEG-HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
+S+ VGT +Y++PEI++ G G +G DWW+ G+ +YE+LYG TPF ET
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
Query: 893 ANVV--MQSLKFPDSPL-ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWA 949
++ + +FP +S +A+DLI+ L+ E RLG Q G + K+H FFEGLNW
Sbjct: 291 GKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSR-ERRLG-QNGIEDFKKHAFFEGLNWE 348
Query: 950 LIRCAIPPELPD 961
IR P +PD
Sbjct: 349 NIRNLEAPYIPD 360
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+++++ +G G G V L + ++A+K++ + +R ER+I+ + P+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L+ F D +VMEY PGGDL L E A+FY AEV+LAL+ +H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSM 193
Query: 731 GVIYRDLKPENILVREDGHIMLTDF 755
G+I+RD+KP+N+L+ + GH+ L DF
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADF 218
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 844 VGTHEYLAPEIIKGEG----HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV--M 897
VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T + ++
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG--LNWALIRCAI 955
SL FP+ IS A++LI L + E RLG + G EIKQHPFF+ NW IR
Sbjct: 296 NSLCFPEDAEISKHAKNLICAFL-TDREVRLG-RNGVEEIKQHPFFKNDQWNWDNIRETA 353
Query: 956 PPELPDF 962
P +P+
Sbjct: 354 APVVPEL 360
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 133/332 (40%), Gaps = 79/332 (23%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G VY AE I T AIK++D + + + + R Q E +I L HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ LY+ F N LV+E C G+++ + ++ K FSE AR ++ ++ +
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQI--------IT 123
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQ 790
G++Y L IL R DL+L S LL + N+ I
Sbjct: 124 GMLY--LHSHGILHR----------DLTL----SNLLLTRNMNIK-------------IA 154
Query: 791 PFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYL 850
F + ++P + + GT Y+
Sbjct: 155 DFGLATQLKMP-----------------------------------HEKHYTLCGTPNYI 179
Query: 851 APEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPLISF 910
+PEI HG D W+ G Y LL GR PF + TL VV+ + P +S
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP--SFLSI 237
Query: 911 QARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
+A+DLI LL + P +RL + + HPF
Sbjct: 238 EAKDLIHQLLRRNPADRL----SLSSVLDHPF 265
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 9/163 (5%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F++ + +G G G VY T ++A+K +D + + ++ A ER +L +
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 666 L---DHPFLPTL-YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
+ D PF+ + Y+ T D LS +++ GGDLH Q G FSE RFY AE++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLHY-HLSQHG-VFSEADMRFYAAEII 301
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVS 764
L LE++H V+YRDLKP NIL+ E GH+ ++ DL L C S
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 342
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Query: 831 LVAEPTDARSNSFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPF---KGS 886
L + + + ++ VGTH Y+APE++ KG + ++ DW++ G L++LL G +PF K
Sbjct: 337 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 396
Query: 887 GNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEG 945
E + +++ PDS S + R L+ GLL ++ RLG +GA E+K+ PFF
Sbjct: 397 DKHEIDRMTLTMAVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 454
Query: 946 LNWALI 951
L+W ++
Sbjct: 455 LDWQMV 460
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 9/163 (5%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F++ + +G G G VY T ++A+K +D + + ++ A ER +L +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 666 L---DHPFLPTL-YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
+ D PF+ + Y+ T D LS +++ GGDLH Q G FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLHY-HLSQHG-VFSEADMRFYAAEII 302
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVS 764
L LE++H V+YRDLKP NIL+ E GH+ ++ DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Query: 831 LVAEPTDARSNSFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPF---KGS 886
L + + + ++ VGTH Y+APE++ KG + ++ DW++ G L++LL G +PF K
Sbjct: 338 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 887 GNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEG 945
E + +++ PDS S + R L+ GLL ++ RLG +GA E+K+ PFF
Sbjct: 398 DKHEIDRMTLTMAVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
Query: 946 LNWALI 951
L+W ++
Sbjct: 456 LDWQMV 461
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 9/163 (5%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F++ + +G G G VY T ++A+K +D + + ++ A ER +L +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 666 L---DHPFLPTL-YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
+ D PF+ + Y+ T D LS +++ GGDLH Q G FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLHY-HLSQHG-VFSEADMRFYAAEII 302
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVS 764
L LE++H V+YRDLKP NIL+ E GH+ ++ DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Query: 831 LVAEPTDARSNSFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPF---KGS 886
L + + + ++ VGTH Y+APE++ KG + ++ DW++ G L++LL G +PF K
Sbjct: 338 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 887 GNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEG 945
E + +++ PDS S + R L+ GLL ++ RLG +GA E+K+ PFF
Sbjct: 398 DKHEIDRMTLTMAVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
Query: 946 LNWALI 951
L+W ++
Sbjct: 456 LDWQMV 461
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 9/163 (5%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ + F++ + +G G G VY T ++A+K +D + + ++ A ER +L +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 666 L---DHPFLPTL-YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
+ D PF+ + Y+ T D LS +++ GGDLH Q G FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLHY-HLSQHG-VFSEADMRFYAAEII 302
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVS 764
L LE++H V+YRDLKP NIL+ E GH+ ++ DL L C S
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFS 343
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Query: 831 LVAEPTDARSNSFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPF---KGS 886
L + + + ++ VGTH Y+APE++ KG + ++ DW++ G L++LL G +PF K
Sbjct: 338 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 887 GNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGS-QKGAAEIKQHPFFEG 945
E + +++ PDS S + R L+ GLL ++ RLG +GA E+K+ PFF
Sbjct: 398 DKHEIDRMTLTMAVELPDS--FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
Query: 946 LNWALI 951
L+W ++
Sbjct: 456 LDWQMV 461
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+++ L + +G G V LA I T + AIK+MD L +PR +TE E L+ L
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLR 66
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
H + LY + N +V+EYCPGG+L +++ Q +L SE R +++ A+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRL----SEEETRVVFRQIVSAVA 122
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
Y+H G +RDLKPEN+L E + L DF L
Sbjct: 123 YVHSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 831 LVAEPT---DARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGS 886
L A+P D + G+ Y APE+I+G+ + G+ D W+ GI LY L+ G PF
Sbjct: 154 LCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD-D 212
Query: 887 GNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
N L +M+ K+ +S + L++ +L +P+ R+ + + HP+
Sbjct: 213 DNVMALYKKIMRG-KYDVPKWLSPSSILLLQQMLQVDPKKRISMK----NLLNHPWI 264
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+G F + LG G G V+ ++ T L+A K ++ + L +RK A E++IL
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
+ F+ +L F + CLVM GGD+ H+ + F EP A FY A+++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSN 773
LE+LH +IYRDLKPEN+L+ +DG++ ++D L++ T K +
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 12/142 (8%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG----NEETLAN 894
++ + GT ++APE++ GE + +VD++ G+ LYE++ R PF+ G N+E
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 895 VVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAE-IKQHPFFEGLNWALIRC 953
V+ Q++ +PD S ++D LL K+PE RLG + G+ + ++ HP F ++W +
Sbjct: 405 VLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 954 AI--PPELPD---FYDYGIQDM 970
+ PP +PD Y IQD+
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDV 484
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+G F + LG G G V+ ++ T L+A K ++ + L +RK A E++IL
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
+ F+ +L F + CLVM GGD+ H+ + F EP A FY A+++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSN 773
LE+LH +IYRDLKPEN+L+ +DG++ ++D L++ T K +
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 12/142 (8%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG----NEETLAN 894
++ + GT ++APE++ GE + +VD++ G+ LYE++ R PF+ G N+E
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 895 VVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAE-IKQHPFFEGLNWALIRC 953
V+ Q++ +PD S ++D LL K+PE RLG + G+ + ++ HP F ++W +
Sbjct: 405 VLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 954 AI--PPELPD---FYDYGIQDM 970
+ PP +PD Y IQD+
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDV 484
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+G F + LG G G V+ ++ T L+A K ++ + L +RK A E++IL
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
+ F+ +L F + CLVM GGD+ H+ + F EP A FY A+++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSN 773
LE+LH +IYRDLKPEN+L+ +DG++ ++D L++ T K +
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 12/142 (8%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG----NEETLAN 894
++ + GT ++APE++ GE + +VD++ G+ LYE++ R PF+ G N+E
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 895 VVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAE-IKQHPFFEGLNWALIRC 953
V+ Q++ +PD S ++D LL K+PE RLG + G+ + ++ HP F ++W +
Sbjct: 405 VLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 954 AI--PPELPD---FYDYGIQDM 970
+ PP +PD Y IQD+
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDV 484
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 2/170 (1%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+G F + LG G G V+ ++ T L+A K ++ + L +RK A E++IL
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLA 723
+ F+ +L F + CLVM GGD+ H+ + F EP A FY A+++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSN 773
LE+LH +IYRDLKPEN+L+ +DG++ ++D L++ T K +
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAG 351
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 12/142 (8%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG----NEETLAN 894
++ + GT ++APE++ GE + +VD++ G+ LYE++ R PF+ G N+E
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 895 VVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAE-IKQHPFFEGLNWALIRC 953
V+ Q++ +PD S ++D LL K+PE RLG + G+ + ++ HP F ++W +
Sbjct: 405 VLEQAVTYPDK--FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 954 AI--PPELPD---FYDYGIQDM 970
+ PP +PD Y IQD+
Sbjct: 463 GMLTPPFVPDSRTVYAKCIQDV 484
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 144/379 (37%), Gaps = 116/379 (30%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARR--KKMPRAQTEREILRML 666
+ ++L +G G G V +A T + AIK+M+ + + K + R +TE +++ L
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGG----DLHVLRQKQLGKC--------------- 707
HP + LY + + CLVME C GG L+V GKC
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 708 -----------FSEPAARFYVAEVLL---------ALEYLHMLGVIYRDLKPENILVRED 747
F E + F E L+ AL YLH G+ +RD+KPEN L +
Sbjct: 146 NEEAINGSIHGFRE-SLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN 204
Query: 748 G--HIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSP 805
I L DF LS K ++ G T++ P+ + +P
Sbjct: 205 KSFEIKLVDFGLS----------KEFYKLNNGEYYGMTTKAG--TPYFV---------AP 243
Query: 806 RFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVD 865
L T ++ PK D
Sbjct: 244 EVLNTTNESYGPKCDA-------------------------------------------- 259
Query: 866 WWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF--PDSPLISFQARDLIRGLLIKE 923
W+ G+ L+ LL G PF G + +T++ V+ + L F P+ ++S ARDL+ LL +
Sbjct: 260 -WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRN 318
Query: 924 PENRLGSQKGAAEIKQHPF 942
+ R + + QHP+
Sbjct: 319 VDERFDAMRAL----QHPW 333
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G G V ++ T ++A K ++ + + +RK A E++IL ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ +L + + + CLV+ GGDL H+ Q G F E A FY AE+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
++YRDLKPENIL+ + GHI ++D L++
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
VGT Y+APE++K E + + DWW G LYE++ G++PF+ + V + P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 904 D--SPLISFQARDLIRGLLIKEPENRLGSQKGAA-EIKQHPFFEGLNWALIRCAI--PPE 958
+ S S QAR L LL K+P RLG + G+A E+K+HP F+ LN+ + + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 959 LPD 961
PD
Sbjct: 466 KPD 468
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 149
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 206
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G G V ++ T ++A K ++ + + +RK A E++IL ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ +L + + + CLV+ GGDL H+ Q G F E A FY AE+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
++YRDLKPENIL+ + GHI ++D L++
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
VGT Y+APE++K E + + DWW G LYE++ G++PF+ + V + P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP 405
Query: 904 D--SPLISFQARDLIRGLLIKEPENRLGSQKGAA-EIKQHPFFEGLNWALIRCAI--PPE 958
+ S S QAR L LL K+P RLG + G+A E+K+HP F+ LN+ + + PP
Sbjct: 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPF 465
Query: 959 LPD 961
PD
Sbjct: 466 KPD 468
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G+++ QK L K F E Y+ E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK-LSK-FDEQRTATYITELANALSY 128
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 185
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
+R + GT +YL PE+I+G H VD W+ G+ YE L G+ PF+ + +ET +
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
FPD ++ ARDLI LL P R E+ +HP+
Sbjct: 226 VEFTFPD--FVTEGARDLISRLLKHNPSQR----PMLREVLEHPW 264
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 140
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 197
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F++ + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSGPCTE 785
H VI+RD+KPEN+L+ +G + + DF S+ S TL + + P + G +
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHD 188
Query: 786 SNC----IQPFCIEPTCQVPCF 803
+ C E +P F
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 8/202 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L F++ + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSGPCTE 785
H VI+RD+KPEN+L+ +G + + DF S+ S TL + + P + G +
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHD 188
Query: 786 SNC----IQPFCIEPTCQVPCF 803
+ C E +P F
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPF 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 128
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEG 185
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 90/213 (42%), Gaps = 8/213 (3%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 124
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL------RCSVSPTLLKSSSNMDPARVS 780
H VI+RD+KPEN+L+ G + + DF S R ++S TL M R+
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMH 184
Query: 781 GPCTESNCIQPFCIEPTCQVPCFSPRFLPATAK 813
+ + C E P F T K
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 217
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
+R + GT +YL PE+I+G H VD W+ G+ YE L G+ PF+ + +ET +
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
FPD ++ ARDLI LL P R E+ +HP+
Sbjct: 222 VEFTFPD--FVTEGARDLISRLLKHNPSQR----PMLREVLEHPW 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 149
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 182
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 180
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 128
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 185
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 88/203 (43%), Gaps = 8/203 (3%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL------RCSVSPTLLKSSSNMDPARVS 780
H VI+RD+KPEN+L+ G + + DF S+ R ++ TL M R+
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 781 GPCTESNCIQPFCIEPTCQVPCF 803
+ + C E P F
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF 206
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
+R + GT +YL PE+I+G H VD W+ G+ YE L G+ PF+ + ++T +
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR 220
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
FPD ++ ARDLI LL P R E+ +HP+
Sbjct: 221 VEFTFPD--FVTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G+++ QK L K F E Y+ E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK-LSK-FDEQRTATYITELANALSY 128
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
+R GT +YL PE+I+G H VD W+ G+ YE L G+ PF+ + +ET +
Sbjct: 166 SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 225
Query: 898 QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
FPD ++ ARDLI LL P R E+ +HP+
Sbjct: 226 VEFTFPD--FVTEGARDLISRLLKHNPSQR----PMLREVLEHPW 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 124
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG 181
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 586 HMSADVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNE 645
HMS +W L F + + LG G G VYLA + + A+KV+
Sbjct: 3 HMSKKRQW-------------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA 49
Query: 646 FLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG 705
L + + + E EI L HP + LY F L++EY P G V R+ Q
Sbjct: 50 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKL 107
Query: 706 KCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
F E Y+ E+ AL Y H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 108 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 90/213 (42%), Gaps = 8/213 (3%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL------RCSVSPTLLKSSSNMDPARVS 780
H VI+RD+KPEN+L+ G + + DF S+ R ++ TL M R+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 186
Query: 781 GPCTESNCIQPFCIEPTCQVPCFSPRFLPATAK 813
+ + C E P F T K
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ +++ LG G G V LA T A+K+++ + LA+ R + E LR+L HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ LY S + +V+EY G +L +++++ ++ SE AR + +++ A+EY
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKM----SEQEARRFFQQIISAVEYC 128
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H +++RDLKPEN+L+ E ++ + DF LS
Sbjct: 129 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS 159
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 845 GTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
G+ Y APE+I G+ + G VD W+ G+ LY +L R PF N+ P
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 904 DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+S A LI+ +LI P NR+ EI Q +F+
Sbjct: 233 --KFLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 86/151 (56%), Gaps = 7/151 (4%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ +++ LG G G V LA T A+K+++ + LA+ R + E LR+L HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ LY S + +V+EY G +L +++++ ++ SE AR + +++ A+EY
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKM----SEQEARRFFQQIISAVEYC 129
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H +++RDLKPEN+L+ E ++ + DF LS
Sbjct: 130 HRHKIVHRDLKPENLLLDEHLNVKIADFGLS 160
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 845 GTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
G+ Y APE+I G+ + G VD W+ G+ LY +L R PF N+ P
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 904 DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+S A LI+ +LI P NR+ EI Q +F+
Sbjct: 234 --KFLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK 268
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 127
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 128 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 184
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 122
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 179
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 125
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 158
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 65
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 123
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 4/150 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ ++ +LG G G VY A+ T L A KV++ + +++ E EIL DHP+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPY 77
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L + D +++E+CPGG + + +L + +EP + ++L AL +LH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLR 760
+I+RDLK N+L+ +G I L DF +S +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 839 RSNSFVGTHEYLAPEIIKGEG-----HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLA 893
+ +SF+GT ++APE++ E + D W+ GI L E+ P + E
Sbjct: 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP-----HHELNP 227
Query: 894 NVVMQSLKFPDSPLI------SFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
V+ + D P + S + RD ++ L K PE R AA++ +HPF
Sbjct: 228 MRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETR----PSAAQLLEHPF 278
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 88/203 (43%), Gaps = 8/203 (3%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL------RCSVSPTLLKSSSNMDPARVS 780
H VI+RD+KPEN+L+ G + + DF S+ R ++ TL M R+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH 183
Query: 781 GPCTESNCIQPFCIEPTCQVPCF 803
+ + C E P F
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 7/150 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ +++ LG G G V LA T A+K+++ + LA+ R + E LR+L HP
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ LY S + +V+EY G +L +++++ ++ SE AR + +++ A+EY H
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKM----SEQEARRFFQQIISAVEYCH 120
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++RDLKPEN+L+ E ++ + DF LS
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLS 150
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 845 GTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
G+ Y APE+I G+ + G VD W+ G+ LY +L R PF N+ P
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 904 DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPEL 959
+S A LI+ +LI P NR+ EI Q +F+ L +PP+L
Sbjct: 224 --KFLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFKV---DLPEYLLPPDL 270
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 124
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 7/150 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ +++ LG G G V LA T A+K+++ + LA+ R + E LR+L HP
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ LY S + +V+EY G +L +++++ ++ SE AR + +++ A+EY H
Sbjct: 70 IIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKM----SEQEARRFFQQIISAVEYCH 124
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++RDLKPEN+L+ E ++ + DF LS
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLS 154
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 845 GTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
G+ Y APE+I G+ + G VD W+ G+ LY +L R PF N+ P
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 904 DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPEL 959
+S A LI+ +LI P NR+ EI Q +F+ L +PP+L
Sbjct: 228 --KFLSPGAAGLIKRMLIVNPLNRISIH----EIMQDDWFK---VDLPEYLLPPDL 274
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + LG G V LAE T LFA+K + + A + K + E +LR + H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKK--ALKGKESSIENEIAVLRKIKHEN 81
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L + S N LVM+ GG+L R + G ++E A + +VL A+ YLH +
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGEL-FDRIVEKG-FYTEKDASTLIRQVLDAVYYLHRM 139
Query: 731 GVIYRDLKPENILVR---EDGHIMLTDFDLS 758
G+++RDLKPEN+L E+ IM++DF LS
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ +F D
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF-D 242
Query: 905 SPL---ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
SP IS A+D IR L+ K+P R ++ A +HP+ G
Sbjct: 243 SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 125
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + +F S+ S TL + + P + G
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 182
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 87/203 (42%), Gaps = 8/203 (3%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL------RCSVSPTLLKSSSNMDPARVS 780
H VI+RD+KPEN+L+ G + + DF S+ R + TL M R+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMH 183
Query: 781 GPCTESNCIQPFCIEPTCQVPCF 803
+ + C E P F
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 65
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 123
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 65
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 123
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 65
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 123
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + A+KV+ L + + + E EI L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 120
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + DF S+ S TL + + P + G
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 177
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSL 759
H VI+RD+KPEN+L+ G + + DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML 666
L F + + LG G G VYLA + + A+KV+ L + + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + LY F L++EY P G V R+ Q F E Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC--SVSPTLLKSSSNMDPARVSG 781
H VI+RD+KPEN+L+ G + + +F S+ S TL + + P + G
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 133/311 (42%), Gaps = 97/311 (31%)
Query: 633 TNCLFAIKVMDNEFLARRKKMPRAQTEREI--LRMLD-HPFLPTLYSQFTSDNLSCLVME 689
+N FA+K++ K+M A T++EI L++ + HP + L+ F + LVME
Sbjct: 35 SNQAFAVKIIS-------KRM-EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME 86
Query: 690 YCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDG- 748
GG+L +K+ K FSE A + + +++ A+ ++H +GV++RDLKPEN+L ++
Sbjct: 87 LLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEND 144
Query: 749 --HIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSPR 806
I + DF AR+ P QP + PCF+
Sbjct: 145 NLEIKIIDFGF-------------------ARLKPPDN-----QPL------KTPCFTLH 174
Query: 807 FLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDW 866
+ + P+L+ + G+ + D
Sbjct: 175 Y-------------------AAPELLNQ-----------------------NGYDESCDL 192
Query: 867 WTFGIFLYELLYGRTPFKGSGNEETLANVV--MQSLKFPDSPL-------ISFQARDLIR 917
W+ G+ LY +L G+ PF+ T + V M+ +K D +S +A+DLI+
Sbjct: 193 WSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ 252
Query: 918 GLLIKEPENRL 928
GLL +P RL
Sbjct: 253 GLLTVDPNKRL 263
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 85/189 (44%), Gaps = 24/189 (12%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKM------------ 653
+ L + L ++G G G V LA N +A+KV+ + L R+
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 654 ------PRAQTER-----EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQK 702
PR E+ IL+ LDHP + L N L M + V+
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129
Query: 703 QLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCS 762
L K SE ARFY +++ +EYLH +I+RD+KP N+LV EDGHI + DF +S
Sbjct: 130 TL-KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 763 VSPTLLKSS 771
S LL ++
Sbjct: 189 GSDALLSNT 197
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
Query: 836 TDARSNSFVGTHEYLAPEII---KGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
+DA ++ VGT ++APE + + G A+D W G+ LY ++G+ PF
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 893 ANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
+ + Q+L+FPD P I+ +DLI +L K PE+R+ EIK HP+
Sbjct: 250 SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRI----VVPEIKLHPW 295
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEIXINKMLNHE 65
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 123
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.7 bits (86), Expect = 0.036, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEIXINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.036, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEIXINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.0 bits (188), Expect = 5e-14, Method: Composition-based stats.
Identities = 77/318 (24%), Positives = 121/318 (38%), Gaps = 77/318 (24%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ LL+ +G G+ V LA I T A+K++D L + + E I+++L+HP
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHP 66
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ L+ ++ LVMEY GG+ V E AR +++ A++Y H
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCI 789
+++RDLK EN+L+ D +I + DF S T N +
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGF----------------------SNEFTFGNKL 162
Query: 790 QPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEY 849
FC P P A P F G +Y
Sbjct: 163 DTFCGSP--------------------PYAAPEL-------------------FQGK-KY 182
Query: 850 LAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPLIS 909
PE+ D W+ G+ LY L+ G PF G +E V+ + P +S
Sbjct: 183 DGPEV----------DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--YMS 230
Query: 910 FQARDLIRGLLIKEPENR 927
+L++ LI P R
Sbjct: 231 TDCENLLKKFLILNPSKR 248
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 65
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 123
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/150 (31%), Positives = 81/150 (54%), Gaps = 4/150 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ ++ +LG G G VY A+ T L A KV++ + +++ E EIL DHP+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPY 69
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L + D +++E+CPGG + + +L + +EP + ++L AL +LH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLR 760
+I+RDLK N+L+ +G I L DF +S +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 20/122 (16%)
Query: 836 TDARSNSFVGTHEYLAPEII-----KGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
T + +SF+GT ++APE++ K + D W+ GI L E+ P + E
Sbjct: 162 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP-----HHE 216
Query: 891 TLANVVMQSLKFPDSPLI------SFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V+ + D P + S + RD ++ L K PE R AA++ +HPF
Sbjct: 217 LNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETR----PSAAQLLEHPFVS 272
Query: 945 GL 946
+
Sbjct: 273 SI 274
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.030, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 10/159 (6%)
Query: 605 SIGLRH---FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTERE 661
+I RH + + + LG G G V LA T A+K + + L + R + E
Sbjct: 2 AISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREIS 61
Query: 662 ILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAE 719
L++L HP + LY T+ +V+EY GG+L +++ +K++ +E R + +
Sbjct: 62 YLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRM----TEDEGRRFFQQ 116
Query: 720 VLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ A+EY H +++RDLKPEN+L+ ++ ++ + DF LS
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 11/102 (10%)
Query: 845 GTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV--MQSLK 901
G+ Y APE+I G+ + G VD W+ GI LY +L GR PF ++E + N+ + S
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF----DDEFIPNLFKKVNSCV 224
Query: 902 FPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+ +S A+ LIR +++ +P R+ Q EI++ P+F
Sbjct: 225 YVMPDFLSPGAQSLIRRMIVADPMQRITIQ----EIRRDPWF 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 81/320 (25%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ LL+ +G G+ V LA I T A+K++D L + + E I+++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ ++ LVMEY GG++ +++ ++ E AR +++ A++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYC 129
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESN 787
H +++RDLK EN+L+ D +I + DF S T N
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGF----------------------SNEFTFGN 167
Query: 788 CIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTH 847
+ FC P P A P F G
Sbjct: 168 KLDTFCGSP--------------------PYAAPEL-------------------FQGK- 187
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
+Y PE VD W+ G+ LY L+ G PF G +E V+ + P
Sbjct: 188 KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FY 235
Query: 908 ISFQARDLIRGLLIKEPENR 927
+S +L++ LI P R
Sbjct: 236 MSTDCENLLKKFLILNPSKR 255
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.3 bits (186), Expect = 8e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 76.3 bits (186), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.032, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 76.3 bits (186), Expect = 9e-14, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 81/320 (25%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ LL+ +G G+ V LA I T A+K++D L + + E I+++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ ++ LVMEY GG++ +++ ++ E AR +++ A++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYC 129
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESN 787
H +++RDLK EN+L+ D +I + DF S T N
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGF----------------------SNEFTFGN 167
Query: 788 CIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTH 847
+ FC P P A P F G
Sbjct: 168 KLDTFCGSP--------------------PYAAPEL-------------------FQGK- 187
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
+Y PE VD W+ G+ LY L+ G PF G +E V+ + P
Sbjct: 188 KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FY 235
Query: 908 ISFQARDLIRGLLIKEPENR 927
+S +L++ LI P R
Sbjct: 236 MSTDCENLLKKFLILNPSKR 255
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ ++ +LG G G VY A+ T+ L A KV+D + +++ E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPN 95
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L F +N +++E+C GG + + +L + +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAV-MLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLR 760
+I+RDLK NIL DG I L DF +S +
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 839 RSNSFVGTHEYLAPEII-----KGEGHGAAVDWWTFGIFLYEL 876
R +SF+GT ++APE++ K + D W+ GI L E+
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 130/322 (40%), Gaps = 96/322 (29%)
Query: 637 FAIKVMDNEFLARRKKMPRAQTE---RE--ILRMLDHPFLPTLYSQFTSDNLSCLVMEYC 691
FA+K++D +A+ P TE RE I ML HP + L ++SD + +V E+
Sbjct: 52 FAVKIVD---VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 692 PGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV---RE 746
G DL ++++ G +SE A Y+ ++L AL Y H +I+RD+KPEN+L+
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKEN 168
Query: 747 DGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSPR 806
+ L DF ++++ L S + RV +P
Sbjct: 169 SAPVKLGDFGVAIQ-------LGESGLVAGGRVG-----------------------TPH 198
Query: 807 FLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDW 866
F+ R+P P VD
Sbjct: 199 FMAPEVVKREPYGKP------------------------------------------VDV 216
Query: 867 WTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPL----ISFQARDLIRGLLIK 922
W G+ L+ LL G PF G+ +E L +++ K+ +P IS A+DL+R +L+
Sbjct: 217 WGCGVILFILLSGCLPFYGT--KERLFEGIIKG-KYKMNPRQWSHISESAKDLVRRMLML 273
Query: 923 EPENRLGSQKGAAEIKQHPFFE 944
+P R+ E HP+ +
Sbjct: 274 DPAERI----TVYEALNHPWLK 291
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ ++ +LG G G VY A+ T+ L A KV+D + +++ E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPN 95
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L F +N +++E+C GG + + +L + +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAV-MLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLR 760
+I+RDLK NIL DG I L DF +S +
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 839 RSNSFVGTHEYLAPEII-----KGEGHGAAVDWWTFGIFLYEL 876
R +SF+GT ++APE++ K + D W+ GI L E+
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 81/320 (25%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ LL+ +G G+ V LA I T A+K++D L + + E I+++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ ++ LVMEY GG++ +++ ++ E AR +++ A++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYC 129
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESN 787
H +++RDLK EN+L+ D +I + DF S T N
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGF----------------------SNEFTFGN 167
Query: 788 CIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTH 847
+ FC P P A P F G
Sbjct: 168 KLDAFCGAP--------------------PYAAPEL-------------------FQGK- 187
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
+Y PE VD W+ G+ LY L+ G PF G +E V+ + P
Sbjct: 188 KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FY 235
Query: 908 ISFQARDLIRGLLIKEPENR 927
+S +L++ LI P R
Sbjct: 236 MSTDCENLLKKFLILNPSKR 255
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 65
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 123
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.7 bits (86), Expect = 0.033, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ ++ +LG G G VY A+ T+ L A KV+D + +++ E +IL DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPN 95
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L F +N +++E+C GG + + +L + +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAV-MLELERPLTESQIQVVCKQTLDALNYLHDN 154
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLR 760
+I+RDLK NIL DG I L DF +S +
Sbjct: 155 KIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 839 RSNSFVGTHEYLAPEII-----KGEGHGAAVDWWTFGIFLYEL 876
R + F+GT ++APE++ K + D W+ GI L E+
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.035, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 63
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 121
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLA 150
Score = 37.7 bits (86), Expect = 0.036, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I +ML+H
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINKMLNHE 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.036, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+++ L +G G G V +A GT A K + F+ + + R + E EI++ LDH
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDH 65
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + LY F + LVME C GG+L + + F E A + +VL A+ Y H
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 729 MLGVIYRDLKPENILVRE---DGHIMLTDFDLSLR 760
L V +RDLKPEN L D + L DF L+ R
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
VGT Y++P++++G +G D W+ G+ +Y LL G PF + E + + + FP
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 904 DSPLISF--QARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ ++ QA LIR LL K P+ R+ S + +H +FE
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL----EHEWFE 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 77/155 (49%), Gaps = 8/155 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+++ L +G G G V +A GT A K + F+ + + R + E EI++ LDH
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDH 82
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + LY F + LVME C GG+L + + F E A + +VL A+ Y H
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 729 MLGVIYRDLKPENILVRE---DGHIMLTDFDLSLR 760
L V +RDLKPEN L D + L DF L+ R
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
VGT Y++P++++G +G D W+ G+ +Y LL G PF + E + + + FP
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 904 DSPLISF--QARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ ++ QA LIR LL K P+ R+ S + +H +FE
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL----EHEWFE 283
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F++++ LG G G VYLA + A+KV+ L + + + E EI L HP
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +Y+ F L++E+ P G+L+ QK G+ F E + ++ E+ AL Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GR-FDEQRSATFMEELADALHYCHER 133
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTL 767
VI+RD+KPEN+L+ G + + DF S+ +P+L
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVH---APSL 167
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT +YL PE+I+G+ H VD W G+ YE L G PF + ET +V
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPP 957
LKFP P +S ++DLI LL P RL KG E HP+ + A R +PP
Sbjct: 228 DLKFP--PFLSDGSKDLISKLLRYHPPQRL-PLKGVME---HPWVK----ANSRRVLPP 276
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 126/320 (39%), Gaps = 81/320 (25%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ LL+ +G G+ V LA I T A++++D L + + E I+++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ ++ LVMEY GG++ +++ ++ E AR +++ A++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYC 129
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESN 787
H +++RDLK EN+L+ D +I + DF S T N
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGF----------------------SNEFTFGN 167
Query: 788 CIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTH 847
+ FC P P A P F G
Sbjct: 168 KLDEFCGSP--------------------PYAAPEL-------------------FQGK- 187
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
+Y PE VD W+ G+ LY L+ G PF G +E V+ + P
Sbjct: 188 KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FY 235
Query: 908 ISFQARDLIRGLLIKEPENR 927
+S +L++ LI P R
Sbjct: 236 MSTDCENLLKKFLILNPSKR 255
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 126/320 (39%), Gaps = 81/320 (25%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ LL+ +G G+ V LA I T A++++D L + + E I+++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ ++ LVMEY GG++ +++ ++ E AR +++ A++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYC 129
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESN 787
H +++RDLK EN+L+ D +I + DF S T N
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGF----------------------SNEFTFGN 167
Query: 788 CIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTH 847
+ FC P P A P F G
Sbjct: 168 KLDTFCGSP--------------------PYAAPEL-------------------FQGK- 187
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
+Y PE VD W+ G+ LY L+ G PF G +E V+ + P
Sbjct: 188 KYDGPE----------VDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP--FY 235
Query: 908 ISFQARDLIRGLLIKEPENR 927
+S +L++ LI P R
Sbjct: 236 MSTDCENLLKKFLILNPSKR 255
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
++L+Q LG G G V LA T A+K++D + R P + E I ML+H
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---MKRAVDCPENIKKEICINAMLNHE 65
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y N+ L +EYC GG+L + +G EP A+ + +++ + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHG 123
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
+G+ +RD+KPEN+L+ E ++ ++DF L+
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.7 bits (86), Expect = 0.029, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 841 NSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPF 883
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI--LRMLDH 668
F +KLG G G V+L E + IK ++ + R ++P Q E EI L+ LDH
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD----RSQVPMEQIEAEIEVLKSLDH 79
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
P + ++ F + +VME C GG+L ++ + GK SE + +++ AL Y
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 727 LHMLGVIYRDLKPENILVREDG-H--IMLTDFDLS 758
H V+++DLKPENIL ++ H I + DF L+
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 14/114 (12%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
+D S + GT Y+APE+ K + D W+ G+ +Y LL G PF G+ EE
Sbjct: 179 SDEHSTNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKA 237
Query: 896 VMQSLKF-----PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ + P +P QA DL++ +L K+PE R AA++ H +F+
Sbjct: 238 TYKEPNYAVECRPLTP----QAVDLLKQMLTKDPERR----PSAAQVLHHEWFK 283
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R + GT +YL PE+I+G H VD W G+ YELL G PF+ + + ET +V
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
LKFP S + A+DLI LL P RL A++ HP+
Sbjct: 237 DLKFPAS--VPTGAQDLISKLLRHNPSERL----PLAQVSAHPW 274
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 8/199 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + + LG G G VYLA ++ + A+KV+ + + + + E EI L HP
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ LY+ F L++EY P G+L+ ++ Q F E + E+ AL Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSL------RCSVSPTLLKSSSNMDPARVSGPCT 784
VI+RD+KPEN+L+ G + + DF S+ R ++ TL M R+
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKV 202
Query: 785 ESNCIQPFCIEPTCQVPCF 803
+ CI C E P F
Sbjct: 203 DLWCIGVLCYELLVGNPPF 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 607 GLRHFNLLQK-LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLA---RRKKMP--RAQTER 660
LR ++ K LG G G V LA T AIK++ A R+ P +TE
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-KCFSEPAARFYVAE 719
EIL+ L+HP + + + F +++ +V+E GG+L K +G K E + Y +
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF---DKVVGNKRLKEATCKLYFYQ 122
Query: 720 VLLALEYLHMLGVIYRDLKPENILV---REDGHIMLTDF 755
+LLA++YLH G+I+RDLKPEN+L+ ED I +TDF
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 842 SFVGTHEYLAPEI---IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI-T 233
Query: 899 SLKFPDSP----LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
S K+ P +S +A DL++ LL+ +P+ R ++ E +HP+ +
Sbjct: 234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWLQ 279
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 607 GLRHFNLLQK-LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLA---RRKKMP--RAQTER 660
LR ++ K LG G G V LA T AIK++ A R+ P +TE
Sbjct: 13 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 72
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-KCFSEPAARFYVAE 719
EIL+ L+HP + + + F +++ +V+E GG+L K +G K E + Y +
Sbjct: 73 EILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF---DKVVGNKRLKEATCKLYFYQ 128
Query: 720 VLLALEYLHMLGVIYRDLKPENILV---REDGHIMLTDF 755
+LLA++YLH G+I+RDLKPEN+L+ ED I +TDF
Sbjct: 129 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 842 SFVGTHEYLAPEI---IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI-T 239
Query: 899 SLKFPDSP----LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
S K+ P +S +A DL++ LL+ +P+ R ++ E +HP+ +
Sbjct: 240 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWLQ 285
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 607 GLRHFNLLQK-LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLA---RRKKMP--RAQTER 660
LR ++ K LG G G V LA T AIK++ A R+ P +TE
Sbjct: 6 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 65
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-KCFSEPAARFYVAE 719
EIL+ L+HP + + + F +++ +V+E GG+L K +G K E + Y +
Sbjct: 66 EILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF---DKVVGNKRLKEATCKLYFYQ 121
Query: 720 VLLALEYLHMLGVIYRDLKPENILV---REDGHIMLTDF 755
+LLA++YLH G+I+RDLKPEN+L+ ED I +TDF
Sbjct: 122 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 842 SFVGTHEYLAPEI---IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI-T 232
Query: 899 SLKFPDSP----LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
S K+ P +S +A DL++ LL+ +P+ R ++ E +HP+ +
Sbjct: 233 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 607 GLRHFNLLQK-LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLA---RRKKMP--RAQTER 660
LR ++ K LG G G V LA T AIK++ A R+ P +TE
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-KCFSEPAARFYVAE 719
EIL+ L+HP + + + F +++ +V+E GG+L K +G K E + Y +
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF---DKVVGNKRLKEATCKLYFYQ 122
Query: 720 VLLALEYLHMLGVIYRDLKPENILV---REDGHIMLTDF 755
+LLA++YLH G+I+RDLKPEN+L+ ED I +TDF
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 842 SFVGTHEYLAPEI---IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI-T 233
Query: 899 SLKFPDSP----LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
S K+ P +S +A DL++ LL+ +P+ R ++ E +HP+ +
Sbjct: 234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWLQ 279
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI--LRMLDHPFL 671
LQK+G G G L + + IK ++ ++R R ++ RE+ L + HP +
Sbjct: 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEIN---ISRMSSKEREESRREVAVLANMKHPNI 85
Query: 672 PTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLG 731
F + +VM+YC GGDL Q G F E + ++ LAL+++H
Sbjct: 86 VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK 145
Query: 732 VIYRDLKPENILVREDGHIMLTDFDLS 758
+++RD+K +NI + +DG + L DF ++
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
+GT YL+PEI + + + D W G LYEL + F+ + + ++ S P
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP-P 244
Query: 904 DSPLISFQARDLIRGLLIKEPENR 927
S S+ R L+ L + P +R
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 86/159 (54%), Gaps = 14/159 (8%)
Query: 607 GLRHFNLLQK-LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLA---RRKKMP--RAQTER 660
LR ++ K LG G G V LA T AIK++ A R+ P +TE
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-KCFSEPAARFYVAE 719
EIL+ L+HP + + + F +++ +V+E GG+L K +G K E + Y +
Sbjct: 67 EILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF---DKVVGNKRLKEATCKLYFYQ 122
Query: 720 VLLALEYLHMLGVIYRDLKPENILV---REDGHIMLTDF 755
+LLA++YLH G+I+RDLKPEN+L+ ED I +TDF
Sbjct: 123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 842 SFVGTHEYLAPEI---IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI-T 233
Query: 899 SLKFPDSP----LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
S K+ P +S +A DL++ LL+ +P+ R ++ E +HP+ +
Sbjct: 234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWLQ 279
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 133/336 (39%), Gaps = 102/336 (30%)
Query: 637 FAIKVMDNEFLARRKKMPR-------AQTEREILRMLDHPFLPTLYSQFTSDNLSCLVME 689
+A+K+++ + R ++ R Q + IL +++ F D LV E
Sbjct: 41 YAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF---------FEDDTRFYLVFE 91
Query: 690 YCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGH 749
GG + QKQ K F+E A V +V AL++LH G+ +RDLKPENIL
Sbjct: 92 KLQGGSILAHIQKQ--KHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEK 149
Query: 750 ---IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSPR 806
+ + DFDL S M +++ CT P P PC S
Sbjct: 150 VSPVKICDFDL-------------GSGM---KLNNSCT------PI-TTPELTTPCGSAE 186
Query: 807 FLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDW 866
++ P++V TD + + D
Sbjct: 187 YMA-------------------PEVVEVFTD------------------QATFYDKRCDL 209
Query: 867 WTFGIFLYELLYGRTPFKGSGNEE----------TLANVVMQSLK-----FPDSPL--IS 909
W+ G+ LY +L G PF G + N + +S++ FPD IS
Sbjct: 210 WSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHIS 269
Query: 910 FQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
+A+DLI LL+++ + RL AA++ QHP+ +G
Sbjct: 270 SEAKDLISKLLVRDAKQRL----SAAQVLQHPWVQG 301
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
Query: 620 GDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFT 679
GD G VY A+ T+ L A KV+D + +++ E +IL DHP + L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 680 SDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKP 739
+N +++E+C GG + + +L + +E + + L AL YLH +I+RDLK
Sbjct: 78 YENNLWILIEFCAGGAVDAV-MLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 740 ENILVREDGHIMLTDFDLSLR 760
NIL DG I L DF +S +
Sbjct: 137 GNILFTLDGDIKLADFGVSAK 157
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Query: 839 RSNSFVGTHEYLAPEII-----KGEGHGAAVDWWTFGIFLYEL 876
R +SF+GT ++APE++ K + D W+ GI L E+
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ ++KLG G G V L + T AIK++ + E +L+ LDHP
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ LY F LVME GG+L +LRQK FSE A + +VL YL
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 120
Query: 728 HMLGVIYRDLKPENILVR---EDGHIMLTDFDLSLRCSVSPTL 767
H +++RDLKPEN+L+ D I + DF LS V +
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM 163
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE+++ + + D W+ G+ LY LL G PF G ++E L V F
Sbjct: 167 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
PD +S +A+ L++ +L EP R+ A E HP+
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRI----SAEEALNHPW 262
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F++ + LG G G VYLA + A+KV+ L + + + E EI L HP
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +Y+ F L++E+ P G+L+ QK G+ F E + ++ E+ AL Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GR-FDEQRSATFMEELADALHYCHER 133
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTL 767
VI+RD+KPEN+L+ G + + DF S+ +P+L
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVH---APSL 167
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT +YL PE+I+G+ H VD W G+ YE L G PF + ET +V
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPP 957
LKFP P +S ++DLI LL P RL KG E HP+ + A R +PP
Sbjct: 228 DLKFP--PFLSDGSKDLISKLLRYHPPQRL-PLKGVME---HPWVK----ANSRRVLPP 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F++ + LG G G VYLA + A+KV+ L + + + E EI L HP
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +Y+ F L++E+ P G+L+ QK G+ F E + ++ E+ AL Y H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GR-FDEQRSATFMEELADALHYCHER 134
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTL 767
VI+RD+KPEN+L+ G + + DF S+ +P+L
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSVH---APSL 168
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/119 (38%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT +YL PE+I+G+ H VD W G+ YE L G PF + ET +V
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 228
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPP 957
LKFP P +S ++DLI LL P RL KG E HP+ + A R +PP
Sbjct: 229 DLKFP--PFLSDGSKDLISKLLRYHPPQRL-PLKGVME---HPWVK----ANSRRVLPP 277
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ ++KLG G G V L + T AIK++ + E +L+ LDHP
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ LY F LVME GG+L +LRQK FSE A + +VL YL
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYL 137
Query: 728 HMLGVIYRDLKPENILVR---EDGHIMLTDFDLSLRCSVSPTL 767
H +++RDLKPEN+L+ D I + DF LS V +
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM 180
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE+++ + + D W+ G+ LY LL G PF G ++E L V F
Sbjct: 184 LGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 242
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
PD +S +A+ L++ +L EP R+ A E HP+
Sbjct: 243 PPDWTQVSDEAKQLVKLMLTYEPSKRI----SAEEALNHPW 279
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 273
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 127
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 273
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 127
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L+ E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 842 SFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
+ GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 902 FPDSPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
F D S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
RW+ +R Y + LG G V LAE T L AIK + E A
Sbjct: 9 RWKQAEDIRDIY--------DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKE--ALEG 58
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCF-SE 710
K + E +L + HP + L + S L+M+ GG+L + + K F +E
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTE 115
Query: 711 PAARFYVAEVLLALEYLHMLGVIYRDLKPENIL---VREDGHIMLTDFDLS 758
A + +VL A++YLH LG+++RDLKPEN+L + ED IM++DF LS
Sbjct: 116 RDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ +F D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-D 238
Query: 905 SPL---ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
SP IS A+D IR L+ K+PE R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
RW+ +R Y + LG G V LAE T L AIK + E A
Sbjct: 9 RWKQAEDIRDIY--------DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKE--ALEG 58
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCF-SE 710
K + E +L + HP + L + S L+M+ GG+L + + K F +E
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTE 115
Query: 711 PAARFYVAEVLLALEYLHMLGVIYRDLKPENIL---VREDGHIMLTDFDLS 758
A + +VL A++YLH LG+++RDLKPEN+L + ED IM++DF LS
Sbjct: 116 RDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ +F D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-D 238
Query: 905 SPL---ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
SP IS A+D IR L+ K+PE R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
RW+ +R Y + LG G V LAE T L AIK + E A
Sbjct: 9 RWKQAEDIRDIY--------DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKE--ALEG 58
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCF-SE 710
K + E +L + HP + L + S L+M+ GG+L + + K F +E
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGFYTE 115
Query: 711 PAARFYVAEVLLALEYLHMLGVIYRDLKPENIL---VREDGHIMLTDFDLS 758
A + +VL A++YLH LG+++RDLKPEN+L + ED IM++DF LS
Sbjct: 116 RDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ +F D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-D 238
Query: 905 SPL---ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
SP IS A+D IR L+ K+PE R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
RW+ +R Y + LG G V LAE T L AIK + + A
Sbjct: 9 RWKQAEDIRDIY--------DFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKK--ALEG 58
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
K + E +L + HP + L + S L+M+ GG+L R + G ++E
Sbjct: 59 KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-FDRIVEKG-FYTER 116
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENIL---VREDGHIMLTDFDLS 758
A + +VL A++YLH LG+++RDLKPEN+L + ED IM++DF LS
Sbjct: 117 DASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT Y+APE++ + + AVD W+ G+ Y LL G PF + + ++ +F D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-D 238
Query: 905 SPL---ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
SP IS A+D IR L+ K+PE R ++ QHP+ G
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI---LRMLD 667
F L++ +G G G VY + T L AIKVMD E EI + ML
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----------VTGDEEEEIKQEINMLK 75
Query: 668 ----HPFLPTLYSQFTS------DNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYV 717
H + T Y F D+ LVME+C G + L + G E +
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
E+L L +LH VI+RD+K +N+L+ E+ + L DF +S
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAV-----DWWTFGIFLYELLYGRTPF 883
T R N+F+GT ++APE+I + + A D W+ GI E+ G P
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 604 GSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL 663
G + + H+ L LG G G V + E T A+K+++ + + + + + E + L
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 664 RMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVL 721
++ HP + LY ++ +VMEY GG+L ++ + ++ E AR ++L
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV----EEMEARRLFQQIL 121
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A++Y H V++RDLKPEN+L+ + + DF LS
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 845 GTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPF 883
G+ Y APE+I G + G VD W+ G+ LY LL G PF
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 604 GSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL 663
G + + H+ L LG G G V + E T A+K+++ + + + + + E + L
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL 65
Query: 664 RMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVL 721
++ HP + LY ++ +VMEY GG+L ++ + ++ E AR ++L
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRV----EEMEARRLFQQIL 121
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A++Y H V++RDLKPEN+L+ + + DF LS
Sbjct: 122 SAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 845 GTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPF 883
G+ Y APE+I G + G VD W+ G+ LY LL G PF
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 129/330 (39%), Gaps = 103/330 (31%)
Query: 632 GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYC 691
TN FA+K++D + K+ P + E +LR HP + TL + +V E
Sbjct: 45 ATNMEFAVKIID-----KSKRDPTEEIEI-LLRYGQHPNIITLKDVYDDGKYVYVVTELM 98
Query: 692 PGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENIL-VREDG 748
GG+L +LRQK FSE A + + +EYLH GV++RDLKP NIL V E G
Sbjct: 99 KGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 749 H---IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSP 805
+ I + DF + + LL + PC +N + P +E
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLMT-----------PCYTANFVAPEVLE---------- 193
Query: 806 RFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVD 865
+ D A I SL
Sbjct: 194 ----------RQGYDAACDIWSL------------------------------------- 206
Query: 866 WWTFGIFLYELLYGRTPFKGSGN---EETLANVVMQSLKFPDSP----LISFQARDLIRG 918
G+ LY +L G TPF + EE LA + S KF S +S A+DL+
Sbjct: 207 ----GVLLYTMLTGYTPFANGPDDTPEEILARI--GSGKFSLSGGYWNSVSDTAKDLVSK 260
Query: 919 LLIKEPENRLGSQKGAAEIKQHPFFEGLNW 948
+L +P RL AA + +HP+ ++W
Sbjct: 261 MLHVDPHQRL----TAALVLRHPWI--VHW 284
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 8/151 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F ++ LG G V+L + T LFA+K + R + + E +L+ + H
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSL---ENEIAVLKKIKHEN 67
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ TL + S LVM+ GG+L R + G ++E A + +VL A++YLH
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFD-RILERG-VYTEKDASLVIQQVLSAVKYLHEN 125
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
G+++RDLKPEN+L E+ IM+TDF LS
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT Y+APE++ + + AVD W+ G+ Y LL G PF + + +F +
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEF-E 227
Query: 905 SPL---ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIP 956
SP IS A+D I LL K+P R +K + HP+ +G N AL R P
Sbjct: 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTALHRDIYP 277
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 617 LGCGDIGTVYLAE--LIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
LG G G V L + + G C A+KV+ + ++ E ++L+ LDHP + L
Sbjct: 58 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 675 YSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGV 732
Y F LV E GG+L ++ +K+ FSE A + +VL + Y+H +
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNKI 171
Query: 733 IYRDLKPENILVR---EDGHIMLTDFDLSLRCSVSPTL 767
++RDLKPEN+L+ +D +I + DF LS S +
Sbjct: 172 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 209
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ + L V F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQ 931
P +S A+DLIR +L P R+ ++
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 301
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 617 LGCGDIGTVYLAE--LIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
LG G G V L + + G C A+KV+ + ++ E ++L+ LDHP + L
Sbjct: 57 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 675 YSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGV 732
Y F LV E GG+L ++ +K+ FSE A + +VL + Y+H +
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNKI 170
Query: 733 IYRDLKPENILVR---EDGHIMLTDFDLSLRCSVSPTL 767
++RDLKPEN+L+ +D +I + DF LS S +
Sbjct: 171 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 208
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ + L V F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQ 931
P +S A+DLIR +L P R+ ++
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 300
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLA---RRKKMP--RAQTEREILRMLDHP 669
+ LG G G V LA T AI+++ A R+ P +TE EIL+ L+HP
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-KCFSEPAARFYVAEVLLALEYLH 728
+ + + F +++ +V+E GG+L K +G K E + Y ++LLA++YLH
Sbjct: 201 CIIKIKNFFDAEDYY-IVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLLAVQYLH 256
Query: 729 MLGVIYRDLKPENILV---REDGHIMLTDF 755
G+I+RDLKPEN+L+ ED I +TDF
Sbjct: 257 ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 842 SFVGTHEYLAPEI---IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI-T 358
Query: 899 SLKFPDSP----LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
S K+ P +S +A DL++ LL+ +P+ R ++ E +HP+ +
Sbjct: 359 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWLQ 404
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 82/150 (54%), Gaps = 13/150 (8%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLA---RRKKMP--RAQTEREILRMLDHP 669
+ LG G G V LA T AI+++ A R+ P +TE EIL+ L+HP
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-KCFSEPAARFYVAEVLLALEYLH 728
+ + + F +++ +V+E GG+L K +G K E + Y ++LLA++YLH
Sbjct: 215 CIIKIKNFFDAEDYY-IVLELMEGGELF---DKVVGNKRLKEATCKLYFYQMLLAVQYLH 270
Query: 729 MLGVIYRDLKPENILV---REDGHIMLTDF 755
G+I+RDLKPEN+L+ ED I +TDF
Sbjct: 271 ENGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 842 SFVGTHEYLAPEI---IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
+ GT YLAPE+ + G+ AVD W+ G+ L+ L G PF + +L + +
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI-T 372
Query: 899 SLKFPDSP----LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
S K+ P +S +A DL++ LL+ +P+ R ++ E +HP+ +
Sbjct: 373 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE----EALRHPWLQ 418
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT ++APEI+ E G D W+ G+ Y LL G +PF G +ETLANV + +F D
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+K+P+ R+ Q QHP+
Sbjct: 239 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTERE--ILRML 666
+++ ++LG G V T +A K + + R+ + R ERE IL+ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ + + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVY 128
Query: 726 YLHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
YLH L + + DLKPENI++ + I + DF L+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 12/151 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F++L+KLG G G+VY A T + AIK + E + E I++ D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-----SDLQEIIKEISIMQQCDSPH 85
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGG---DLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ Y + + +VMEYC G D+ LR K L +E + L LEYL
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL----TEDEIATILQSTLKGLEYL 141
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H + I+RD+K NIL+ +GH L DF ++
Sbjct: 142 HFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 19/113 (16%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
A+ N +GT ++APE+I+ G+ D W+ GI E+ G+ P+ + + + M
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY---ADIHPMRAIFM 236
Query: 898 QSLKFPDSP--------LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
P +P L S D ++ L+K PE R A ++ QHPF
Sbjct: 237 ----IPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQR----ATATQLLQHPF 281
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 617 LGCGDIGTVYLAE--LIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
LG G G V L + + G C A+KV+ + ++ E ++L+ LDHP + L
Sbjct: 34 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 91
Query: 675 YSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGV 732
Y F LV E GG+L ++ +K+ FSE A + +VL + Y+H +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNKI 147
Query: 733 IYRDLKPENILVR---EDGHIMLTDFDLSLRCSVSPTL 767
++RDLKPEN+L+ +D +I + DF LS S +
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ + L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQ 931
P +S A+DLIR +L P R+ ++
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 277
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLAN+ S F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+KE RL Q+ +HP+
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEAL----RHPW 275
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIK-VMDNEFLARRKKMPRAQTERE--ILRMLD 667
+++ ++LG G V T +A K + + A R+ + R + ERE ILR +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + TL+ + + L++E GG+L L QK+ SE A ++ ++L + Y
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNY 130
Query: 727 LHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 617 LGCGDIGTVYLAE--LIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
LG G G V L + + G C A+KV+ + ++ E ++L+ LDHP + L
Sbjct: 40 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 675 YSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGV 732
Y F LV E GG+L ++ +K+ FSE A + +VL + Y+H +
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYMHKNKI 153
Query: 733 IYRDLKPENILVR---EDGHIMLTDFDLSLRCSVSPTL 767
++RDLKPEN+L+ +D +I + DF LS S +
Sbjct: 154 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 191
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ + L V F
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQ 931
P +S A+DLIR +L P R+ ++
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISAR 283
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 617 LGCGDIGTVYLAE--LIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
LG G G V L + + G C A+KV+ + ++ E ++L+ LDHP + L
Sbjct: 34 LGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 675 YSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGV 732
Y F LV E GG+L ++ +K+ FSE A + +VL + Y H +
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITYXHKNKI 147
Query: 733 IYRDLKPENILVR---EDGHIMLTDFDLSLRCSVS 764
++RDLKPEN+L+ +D +I + DF LS S
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS 182
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE++ G + D W+ G+ LY LL G PF G+ + L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQ 931
P +S A+DLIR L P R+ ++
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISAR 277
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 75/320 (23%), Positives = 122/320 (38%), Gaps = 81/320 (25%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++ LL+ +G G+ V LA I T A+K++D L + + E I ++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLNHP 73
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ ++ LV EY GG++ +++ + E AR +++ A++Y
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX----KEKEARAKFRQIVSAVQYC 129
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESN 787
H +++RDLK EN+L+ D +I + DF S T N
Sbjct: 130 HQKFIVHRDLKAENLLLDADXNIKIADFGF----------------------SNEFTFGN 167
Query: 788 CIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTH 847
+ FC P P A P F G
Sbjct: 168 KLDAFCGAP--------------------PYAAPEL-------------------FQGK- 187
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
+Y PE+ D W+ G+ LY L+ G PF G +E V+ + P
Sbjct: 188 KYDGPEV----------DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF--Y 235
Query: 908 ISFQARDLIRGLLIKEPENR 927
S +L++ LI P R
Sbjct: 236 XSTDCENLLKKFLILNPSKR 255
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLAN+ S F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+KE RL Q+ +HP+
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEAL----RHPW 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDN-EFLARRKKMPRAQTERE--ILRMLD 667
+++ ++LG G V T +A K + + A R+ + R + ERE ILR +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALEY 726
H + TL+ + + L++E GG+L L QK+ SE A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNY 130
Query: 727 LHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 127/304 (41%), Gaps = 69/304 (22%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
LR + L++KLG G G V+ + T + A+K + F A + +T REI+ + +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI---FDAFQNSTDAQRTFREIMILTE 64
Query: 668 ---HPFLPTLYSQFTSDNLS--CLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVL 721
H + L + +DN LV +Y DLH V+R L EP + YV L
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANIL-----EPVHKQYVVYQL 118
Query: 722 L-ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
+ ++YLH G+++RD+KP NIL+ + H+ + DF LS R V+ ++ +N P ++
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS-RSFVN---IRRVTNNIPLSIN 174
Query: 781 GPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARS 840
+ QP +
Sbjct: 175 ENTENFDDDQPILTD--------------------------------------------- 189
Query: 841 NSFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+V T Y APEI+ G + +D W+ G L E+L G+ F GS L ++
Sbjct: 190 --YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII-GV 246
Query: 900 LKFP 903
+ FP
Sbjct: 247 IDFP 250
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLAN+ S F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+KE RL Q+ +HP+
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEAL----RHPW 275
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDN-EFLARRKKMPRAQTERE--ILRMLD 667
+++ ++LG G V T +A K + + A R+ + R + ERE ILR +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALEY 726
H + TL+ + + L++E GG+L L QK+ SE A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNY 130
Query: 727 LHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL--ARRKKMPRAQTEREILRMLD 667
++ LL+ +G G+ V LA I T AIK++D L +K+ R E I+++L+
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKILN 69
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + L+ ++ L+MEY GG++ +++ ++ E AR +++ A++
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRM----KEKEARSKFRQIVSAVQ 125
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTL 767
Y H +++RDLK EN+L+ D +I + DF S +V L
Sbjct: 126 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 167
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
+ ++F G+ Y APE+ +G+ + G VD W+ G+ LY L+ G PF G +E V+
Sbjct: 165 GKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 224
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENR 927
+ P +S +L++ L+ P R
Sbjct: 225 RGKYRIP--FYMSTDCENLLKRFLVLNPIKR 253
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 12/154 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ ++KLG G G V L T+ AIK++ ++ + E +L++LDHP
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVLKLLDHPN 97
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ LY F LVME GG+L + R K F+E A + +VL + YL
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-----FNEVDAAVIIKQVLSGVTYL 152
Query: 728 HMLGVIYRDLKPENILV---REDGHIMLTDFDLS 758
H +++RDLKPEN+L+ +D I + DF LS
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE+++ + + D W+ G+ L+ LL G PF G ++E L V F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
P+ +S A+DLI+ +L + + R+ +Q+ +HP+
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL----EHPW 294
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLAN+ S F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+KE RL Q+ +HP+
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEAL----RHPW 275
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDN-EFLARRKKMPRAQTERE--ILRMLD 667
+++ ++LG G V T +A K + + A R+ + R + ERE ILR +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALEY 726
H + TL+ + + L++E GG+L L QK+ SE A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNY 130
Query: 727 LHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 127/330 (38%), Gaps = 103/330 (31%)
Query: 632 GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYC 691
TN FA+K++D + K+ P + E +LR HP + TL + +V E
Sbjct: 45 ATNXEFAVKIID-----KSKRDPTEEIEI-LLRYGQHPNIITLKDVYDDGKYVYVVTELX 98
Query: 692 PGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENIL-VREDG 748
GG+L +LRQK FSE A + + +EYLH GV++RDLKP NIL V E G
Sbjct: 99 KGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 749 H---IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSP 805
+ I + DF + + LL + PC +N + P +E
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLXT-----------PCYTANFVAPEVLE---------- 193
Query: 806 RFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVD 865
+ D A I SL
Sbjct: 194 ----------RQGYDAACDIWSL------------------------------------- 206
Query: 866 WWTFGIFLYELLYGRTPFKGSGN---EETLANVVMQSLKFPDSP----LISFQARDLIRG 918
G+ LY L G TPF + EE LA + S KF S +S A+DL+
Sbjct: 207 ----GVLLYTXLTGYTPFANGPDDTPEEILARI--GSGKFSLSGGYWNSVSDTAKDLVSK 260
Query: 919 LLIKEPENRLGSQKGAAEIKQHPFFEGLNW 948
L +P RL AA + +HP+ ++W
Sbjct: 261 XLHVDPHQRL----TAALVLRHPWI--VHW 284
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G Y + T +FA KV+ L + + + TE I + LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F D+ +V+E C L L +++ K +EP AR+++ + + ++YLH VI+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 737 LKPENILVREDGHIMLTDFDLSLR 760
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R + GT Y+APE++ +GH VD W+ G LY LL G+ PF+ S +ET +
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P I+ A LIR +L +P R AE+ FF
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR----PSVAELLTDEFF 296
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL--ARRKKMPRAQTEREILRMLD 667
++ LL+ +G G+ V LA I T AIK++D L +K+ R E I+++L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKILN 72
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + L+ ++ L+MEY GG++ +++ ++ E AR +++ A++
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRM----KEKEARSKFRQIVSAVQ 128
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTL 767
Y H +++RDLK EN+L+ D +I + DF S +V L
Sbjct: 129 YCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
+ ++F G Y APE+ +G+ + G VD W+ G+ LY L+ G PF G +E V+
Sbjct: 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL 227
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENR 927
+ P +S +L++ L+ P R
Sbjct: 228 RGKYRIP--FYMSTDCENLLKRFLVLNPIKR 256
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G Y + T +FA KV+ L + + + TE I + LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F D+ +V+E C L L +++ K +EP AR+++ + + ++YLH VI+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 737 LKPENILVREDGHIMLTDFDLSLR 760
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT Y+APE++ +GH VD W+ G LY LL G+ PF+ S +ET +
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P I+ A LIR +L +P R AE+ FF
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR----PSVAELLTDEFF 296
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLAN+ S F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+KE RL Q+ +HP+
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEAL----RHPW 275
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDN-EFLARRKKMPRAQTERE--ILRMLD 667
+++ ++LG G V T +A K + + A R+ + R + ERE ILR +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALEY 726
H + TL+ + + L++E GG+L L QK+ SE A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNY 130
Query: 727 LHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G Y + T +FA KV+ L + + + TE I + LD+P + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F D+ +V+E C L L +++ K +EP AR+++ + + ++YLH VI+RD
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 167
Query: 737 LKPENILVREDGHIMLTDFDLSLR 760
LK N+ + +D + + DF L+ +
Sbjct: 168 LKLGNLFLNDDMDVKIGDFGLATK 191
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT Y+APE++ +GH VD W+ G LY LL G+ PF+ S +ET +
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P I+ A LIR +L +P R AE+ FF
Sbjct: 258 EYSVPRH--INPVASALIRRMLHADPTLR----PSVAELLTDEFF 296
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETLAN+ S F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDE 239
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S A+D IR LL+KE RL Q+ +HP+
Sbjct: 240 EFFSHTSELAKDFIRKLLVKETRKRLTIQEAL----RHPW 275
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDN-EFLARRKKMPRAQTERE--ILRMLD 667
+++ ++LG G V T +A K + + A R+ + R + ERE ILR +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALEY 726
H + TL+ + + L++E GG+L L QK+ SE A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDGVNY 130
Query: 727 LHMLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 118/298 (39%), Gaps = 83/298 (27%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL--ARRKKMPRAQTEREILRMLD 667
++ L + +G G+ V LA + T A+K++D L +K+ R E I+++L+
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR---EVRIMKILN 72
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + L+ ++ LVMEY GG++ +++ ++ E AR +++ A++
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQ 128
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTE 785
Y H +++RDLK EN+L+ D +I + DF S +V
Sbjct: 129 YCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTV---------------------- 166
Query: 786 SNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVG 845
N + FC P P A P F G
Sbjct: 167 GNKLDTFCGSP--------------------PYAAPEL-------------------FQG 187
Query: 846 THEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
+Y PE+ D W+ G+ LY L+ G PF G +E V+ + P
Sbjct: 188 K-KYDGPEV----------DVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 12/190 (6%)
Query: 599 VRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
+R G L +F + +K+G G VY A + A+K + L K
Sbjct: 22 LRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK 81
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-----HVLRQKQLGKCFSEPAA 713
E ++L+ L+HP + Y+ F DN +V+E GDL H +QK+L E
Sbjct: 82 EIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL---IPERTV 138
Query: 714 RFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL----SLRCSVSPTLLK 769
Y ++ ALE++H V++RD+KP N+ + G + L D L S + + + +L+
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 198
Query: 770 SSSNMDPARV 779
+ M P R+
Sbjct: 199 TPYYMSPERI 208
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG-NEETLANVVMQ 898
++S VGT Y++PE I G+ D W+ G LYE+ ++PF G N +L + Q
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ 252
Query: 899 SLKFPDSPLISF--QARDLIRGLLIKEPENR 927
+P P + + R L+ + +PE R
Sbjct: 253 C-DYPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+N++ LG G G V + T +A+KV+ N+ A+ K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLDHPN 82
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ L+ + +V E GG+L ++++K+ FSE A + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH 138
Query: 729 MLGVIYRDLKPENILV---REDGHIMLTDFDLS 758
+++RDLKPENIL+ +D I + DF LS
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE+++G + D W+ G+ LY LL G PF G + L V F
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
P IS A+DLIR +L P R+ A + +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+N++ LG G G V + T +A+KV+ N+ A+ K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLDHPN 82
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ L+ + +V E GG+L ++++K+ FSE A + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH 138
Query: 729 MLGVIYRDLKPENILV---REDGHIMLTDFDLS 758
+++RDLKPENIL+ +D I + DF LS
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE+++G + D W+ G+ LY LL G PF G + L V F
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
P IS A+DLIR +L P R+ A + +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G Y + T +FA KV+ L + + + TE I + LD+P + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F D+ +V+E C L L +++ K +EP AR+++ + + ++YLH VI+RD
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 737 LKPENILVREDGHIMLTDFDLS 758
LK N+ + +D + + DF L+
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLA 173
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT Y+APE++ +GH VD W+ G LY LL G+ PF+ S +ET +
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P I+ A LIR +L +P R AE+ FF
Sbjct: 242 EYSVPRH--INPVASALIRRMLHADPTLR----PSVAELLTDEFF 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 604 GSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL 663
G + + H+ L LG G G V + + T A+K+++ + + + + + E + L
Sbjct: 11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL 70
Query: 664 RMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVL 721
++ HP + LY ++ + +VMEY GG+L ++ + +L E +R ++L
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRL----DEKESRRLFQQIL 126
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++Y H V++RDLKPEN+L+ + + DF LS
Sbjct: 127 SGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 845 GTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPF 883
G+ Y APE+I G + G VD W+ G+ LY LL G PF
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 132/348 (37%), Gaps = 110/348 (31%)
Query: 622 IGTVYLAELIGTNCLFAIK-VMDNEFLARR----------KKMPRAQT----EREILRML 666
IG + +L+G +K V+D+E L RR +++P + E ++LR L
Sbjct: 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL 63
Query: 667 DHP----FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLR---QKQLGKCFSEPAARFYVAE 719
H + LY++ +VMEYC G +L +K+ C A Y +
Sbjct: 64 RHKNVIQLVDVLYNE--EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC----QAHGYFCQ 117
Query: 720 VLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARV 779
++ LEYLH G++++D+KP N+L+ G + ++ +
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV---------------------- 155
Query: 780 SGPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDAR 839
+ + PF + TC+ SP F P
Sbjct: 156 ------AEALHPFAADDTCRTSQGSPAFQP------------------------------ 179
Query: 840 SNSFVGTHEYLAPEIIKGEG--HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
PEI G G VD W+ G+ LY + G PF+G + N+
Sbjct: 180 ------------PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK 227
Query: 898 QSLKFPD--SPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
S P P +S DL++G+L EP R + +I+QH +F
Sbjct: 228 GSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIR----QIRQHSWF 267
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 10/153 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+N++ LG G G V + T +A+KV+ N+ A+ K E E+L+ LDHP
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLDHPN 82
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ L+ + +V E GG+L ++++K+ FSE A + +V + Y+H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMH 138
Query: 729 MLGVIYRDLKPENILV---REDGHIMLTDFDLS 758
+++RDLKPENIL+ +D I + DF LS
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF- 902
+GT Y+APE+++G + D W+ G+ LY LL G PF G + L V F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 903 -PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
P IS A+DLIR +L P R+ A + +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 6/146 (4%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G G V+ E T A K++ + ++++ + E ++ LDH L LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV---KNEISVMNQLDHANLIQLYD 153
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F S N LVMEY GG+L R +E ++ ++ + ++H + +++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGEL-FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 737 LKPENILV--REDGHIMLTDFDLSLR 760
LKPENIL R+ I + DF L+ R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARR 238
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E+LAPE++ + D W+ G+ Y LL G +PF G + ETL N++ D
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
IS +A++ I LLIKE R+ A+E +HP+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRI----SASEALKHPWL 346
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 129/323 (39%), Gaps = 94/323 (29%)
Query: 637 FAIKVMD----NEFLARRKKMPRAQT--EREILRMLD-HPFLPTLYSQFTSDNLSCLVME 689
+A+K++D F A + R T E +ILR + HP + L + ++ LV +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 690 YCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGH 749
G+L +++ SE R + +L + LH L +++RDLKPENI
Sbjct: 105 LMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI------- 155
Query: 750 IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLP 809
L D D++++ + F +CQ+
Sbjct: 156 --LLDDDMNIK----------------------------LTDFGF--SCQL--------- 174
Query: 810 ATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGE------GHGAA 863
DP ++RS+ GT YLAPEII+ G+G
Sbjct: 175 ----------DPGEKLRSV---------------CGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 864 VDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF--PDSPLISFQARDLIRGLLI 921
VD W+ G+ +Y LL G PF L ++ + +F P+ S +DL+ L+
Sbjct: 210 VDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 269
Query: 922 KEPENRLGSQKGAAEIKQHPFFE 944
+P+ R +++ A HPFF+
Sbjct: 270 VQPQKRYTAEEALA----HPFFQ 288
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G + T +FA K++ L + + + E I R L H + +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F ++ +V+E C L L +++ K +EP AR+Y+ +++L +YLH VI+RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 737 LKPENILVREDGHIMLTDFDLSLR 760
LK N+ + ED + + DF L+ +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATK 170
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R + GT Y+APE++ +GH VD W+ G +Y LL G+ PF+ S +ET +
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENR 927
P I+ A LI+ +L +P R
Sbjct: 237 EYSIPKH--INPVAASLIQKMLQTDPTAR 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 2/144 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G + T +FA K++ L + + + E I R L H + +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F ++ +V+E C L L +++ K +EP AR+Y+ +++L +YLH VI+RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 737 LKPENILVREDGHIMLTDFDLSLR 760
LK N+ + ED + + DF L+ +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATK 190
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT Y+APE++ +GH VD W+ G +Y LL G+ PF+ S +ET +
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENR 927
P I+ A LI+ +L +P R
Sbjct: 257 EYSIPKH--INPVAASLIQKMLQTDPTAR 283
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G + T +FA K++ L + + + E I R L H + +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F ++ +V+E C L L +++ K +EP AR+Y+ +++L +YLH VI+RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 737 LKPENILVREDGHIMLTDFDLS 758
LK N+ + ED + + DF L+
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLA 186
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT Y+APE++ +GH VD W+ G +Y LL G+ PF+ S +ET +
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENR 927
P I+ A LI+ +L +P R
Sbjct: 255 EYSIPKH--INPVAASLIQKMLQTDPTAR 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G + T +FA K++ L + + + E I R L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F ++ +V+E C L L +++ K +EP AR+Y+ +++L +YLH VI+RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 737 LKPENILVREDGHIMLTDFDLS 758
LK N+ + ED + + DF L+
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLA 164
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R + GT Y+APE++ +GH VD W+ G +Y LL G+ PF+ S +ET +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENR 927
P I+ A LI+ +L +P R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G + T +FA K++ L + + + E I R L H + +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F ++ +V+E C L L +++ K +EP AR+Y+ +++L +YLH VI+RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 737 LKPENILVREDGHIMLTDFDLS 758
LK N+ + ED + + DF L+
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLA 164
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R + GT Y+APE++ +GH VD W+ G +Y LL G+ PF+ S +ET +
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENR 927
P I+ A LI+ +L +P R
Sbjct: 233 EYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARR 650
R EA + + G + F + +LG G+ G V+ + + A K++ E A R
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 110
Query: 651 KKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSE 710
++ R E ++L + P++ Y F SD + ME+ GG L + +K G+ +
Sbjct: 111 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQ 166
Query: 711 PAARFYVAEVLLALEYL-HMLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTL 767
+ +A V+ L YL +++RD+KP NILV G I L DF +S L S++ +
Sbjct: 167 ILGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 225
Query: 768 LKSSSNMDPARVSG 781
+ + S M P R+ G
Sbjct: 226 VGTRSYMSPERLQG 239
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
D+ +NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 219 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 633 TNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCP 692
TN +A+KV+D + K+ P + E +LR HP + TL + LV E
Sbjct: 51 TNMEYAVKVID-----KSKRDPSEEIEI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 693 GGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENIL-VREDGH 749
GG+L +LRQK FSE A F + + +EYLH GV++RDLKP NIL V E G+
Sbjct: 105 GGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
Query: 750 ---IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQP 791
+ + DF + + LL + PC +N + P
Sbjct: 161 PECLRICDFGFAKQLRAENGLLMT-----------PCYTANFVAP 194
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETL N+ + F +
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 905 SPL--ISFQARDLIRGLLIKEPENRL 928
S A+D IR LL+K+P+ R+
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRM 279
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 601 LQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTE 659
L + S+ H+ + ++LG G V GT +A K + L + R+ + R + E
Sbjct: 18 LYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE 77
Query: 660 RE--ILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFY 716
RE ILR + HP + TL+ F + L++E GG+L L +K+ +E A +
Sbjct: 78 REVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQF 134
Query: 717 VAEVLLALEYLHMLGVIYRDLKPENILVRE----DGHIMLTDFDLS 758
+ ++L + YLH + + DLKPENI++ + + I L DF ++
Sbjct: 135 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETL N+ + F +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 905 SPL--ISFQARDLIRGLLIKEPENRL 928
S A+D IR LL+K+P+ R+
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRM 265
Score = 63.9 bits (154), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLAR-RKKMPRAQTERE--ILRML 666
H+ + ++LG G V GT +A K + L+ R+ + R + ERE ILR +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ F + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVH 129
Query: 726 YLHMLGVIYRDLKPENILVRE----DGHIMLTDFDLS 758
YLH + + DLKPENI++ + + I L DF ++
Sbjct: 130 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 27/165 (16%)
Query: 633 TNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCP 692
TN +A+KV+D + K+ P + E +LR HP + TL + LV E
Sbjct: 51 TNMEYAVKVID-----KSKRDPSEEIEI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 693 GGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENIL-VREDGH 749
GG+L +LRQK FSE A F + + +EYLH GV++RDLKP NIL V E G+
Sbjct: 105 GGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
Query: 750 ---IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQP 791
+ + DF + + LL + PC +N + P
Sbjct: 161 PECLRICDFGFAKQLRAENGLLMT-----------PCYTANFVAP 194
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 846 THEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGN---EETLANVVMQSLKF 902
T ++APE++K +G+ D W+ GI LY +L G TPF + EE L + S KF
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRI--GSGKF 245
Query: 903 PDSP----LISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
S +S A+DL+ +L +P RL A ++ QHP+
Sbjct: 246 TLSGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 66.6 bits (161), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APEI+ E G D W+ G+ Y LL G +PF G +ETL N+ + F +
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 232
Query: 905 SPL--ISFQARDLIRGLLIKEPENRL 928
S A+D IR LL+K+P+ R+
Sbjct: 233 EYFSNTSELAKDFIRRLLVKDPKRRM 258
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLAR-RKKMPRAQTERE--ILRML 666
H+ + ++LG G V GT +A K + L+ R+ + R + ERE ILR +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALE 725
HP + TL+ F + L++E GG+L L +K+ +E A ++ ++L +
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE---SLTEDEATQFLKQILDGVH 122
Query: 726 YLHMLGVIYRDLKPENILVRE----DGHIMLTDFDLS 758
YLH + + DLKPENI++ + + I L DF ++
Sbjct: 123 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F L+K+G G G V+ T + AIK++D ++ Q E +L D P+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGD-LHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y + D ++MEY GG L +L L E + E+L L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL----DETQIATILREILKGLDYLHS 137
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
I+RD+K N+L+ E G + L DF ++
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVA 166
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTP 882
T + N FVGT ++APE+IK + + D W+ GI EL G P
Sbjct: 172 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 2/142 (1%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
LG G + T +FA K++ L + + + E I R L H + +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 677 QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRD 736
F ++ +V+E C L L +++ K +EP AR+Y+ +++L +YLH VI+RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 737 LKPENILVREDGHIMLTDFDLS 758
LK N+ + ED + + DF L+
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLA 162
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R GT Y+APE++ +GH VD W+ G +Y LL G+ PF+ S +ET +
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENR 927
P I+ A LI+ +L +P R
Sbjct: 231 EYSIPKH--INPVAASLIQKMLQTDPTAR 257
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
T E+ APEI+ E G D W G+ Y LL G +PF G + ETL NV +F +
Sbjct: 212 ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 271
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
+S +A+D I+ LL KEP RL +HP+ +G
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL----EHPWLKG 310
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 599 VRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
V ++ GS+ ++++L++LG G G V+ T +F K ++ + + + +
Sbjct: 42 VEVKQGSV-YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KN 97
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ L HP L L+ F L++E+ GG+L R SE Y+
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL-FDRIAAEDYKMSEAEVINYMR 156
Query: 719 EVLLALEYLHMLGVIYRDLKPENIL--VREDGHIMLTDFDLSLRCS 762
+ L+++H +++ D+KPENI+ ++ + + DF L+ + +
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ + +K+G G GTVY A + T AI+ M+ L ++ K E ++R +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 76
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + + +VMEY GG L + + C E E L ALE+LH
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH 133
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDF 755
VI+RD+K +NIL+ DG + LTDF
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 15/116 (12%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
P ++ ++ VGT ++APE++ + +G VD W+ GI E++ G P+ NE L
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRA 224
Query: 895 VVMQS------LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ + + L+ P+ +S RD + L + E R GS K E+ QH F +
Sbjct: 225 LYLIATNGTPELQNPEK--LSAIFRDFLNRCLDMDVEKR-GSAK---ELLQHQFLK 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ + +K+G G GTVY A + T AI+ M+ L ++ K E ++R +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 76
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + + +VMEY GG L + + C E E L ALE+LH
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH 133
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDF 755
VI+RD+K +NIL+ DG + LTDF
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
P ++ + VGT ++APE++ + +G VD W+ GI E++ G P+ NE L
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRA 224
Query: 895 VVMQS------LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ + + L+ P+ +S RD + L + E R GS K E+ QH F +
Sbjct: 225 LYLIATNGTPELQNPEK--LSAIFRDFLNRCLDMDVEKR-GSAK---ELLQHQFLK 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F L+K+G G G V+ T + AIK++D ++ Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGD-LHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y + D ++MEY GG L +L L E + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL----DETQIATILREILKGLDYLHS 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
I+RD+K N+L+ E G + L DF ++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTP 882
T + N+FVGT ++APE+IK + + D W+ GI EL G P
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ + +K+G G GTVY A + T AI+ M+ L ++ K E ++R +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 76
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + + +VMEY GG L + + C E E L ALE+LH
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH 133
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDF 755
VI+RD+K +NIL+ DG + LTDF
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
P ++ + VGT ++APE++ + +G VD W+ GI E++ G P+ NE L
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRA 224
Query: 895 VVMQS------LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ + + L+ P+ +S RD + L + E R GS K E+ QH F +
Sbjct: 225 LYLIATNGTPELQNPEK--LSAIFRDFLNRCLEMDVEKR-GSAK---ELLQHQFLK 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F L+K+G G G V+ T + AIK++D ++ Q E +L D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGD-LHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y + D ++MEY GG L +L L E + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL----DETQIATILREILKGLDYLHS 122
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
I+RD+K N+L+ E G + L DF ++
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTP 882
T + N FVGT ++APE+IK + + D W+ GI EL G P
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ + +K+G G GTVY A + T AI+ M+ L ++ K E ++R +
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 77
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + + +VMEY GG L + + C E E L ALE+LH
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH 134
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDF 755
VI+RD+K +NIL+ DG + LTDF
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDF 161
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 15/116 (12%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
P ++ + VGT ++APE++ + +G VD W+ GI E++ G P+ NE L
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRA 225
Query: 895 VVMQS------LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ + + L+ P+ +S RD + L + E R GS K E+ QH F +
Sbjct: 226 LYLIATNGTPELQNPEK--LSAIFRDFLNRCLEMDVEKR-GSAK---ELIQHQFLK 275
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L ++LG G V I T +A K+++ + L+ R + + E I R+L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 64
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ + + LV + GG+L V R+ +SE A + ++L ++ +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-----YSEADASHCIQQILESVNHC 119
Query: 728 HMLGVIYRDLKPENILV---REDGHIMLTDFDLSL 759
H+ G+++RDLKPEN+L+ + + L DF L++
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
F GT YL+PE+++ + +G VD W G+ LY LL G PF + + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 903 --PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P+ ++ +A+DLI +L P R+ A+E +HP+
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRI----TASEALKHPWI 264
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F L+K+G G G V+ T + AIK++D ++ Q E +L D P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGD-LHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y + D ++MEY GG L +L L E + E+L L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL----DETQIATILREILKGLDYLHS 142
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
I+RD+K N+L+ E G + L DF ++
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVA 171
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTP 882
T + N+FVGT ++APE+IK + + D W+ GI EL G P
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E+ APE+ +G+ G D W+ G+ Y LL G +PF G ++ETL NV D
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD 271
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
S IS +D IR LL+ +P R+ + +HP+
Sbjct: 272 SAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 308
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM-- 665
L H+++ ++LG G G V+ T FA K F+ + + +EI M
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAK-----FVMTPHESDKETVRKEIQTMSV 104
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
L HP L L+ F DN ++ E+ GG+L + K SE A Y+ +V L
Sbjct: 105 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLC 163
Query: 726 YLHMLGVIYRDLKPENIL--VREDGHIMLTDFDLS 758
++H ++ DLKPENI+ + + L DF L+
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E+ APE+ +G+ G D W+ G+ Y LL G +PF G ++ETL NV D
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD 377
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
S IS +D IR LL+ +P R+ + +HP+
Sbjct: 378 SAFSGISEDGKDFIRKLLLADPNTRMTIHQAL----EHPWL 414
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 10/155 (6%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM-- 665
L H+++ ++LG G G V+ T FA K F+ + + +EI M
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAK-----FVMTPHESDKETVRKEIQTMSV 210
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
L HP L L+ F DN ++ E+ GG+L + K SE A Y+ +V L
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLC 269
Query: 726 YLHMLGVIYRDLKPENIL--VREDGHIMLTDFDLS 758
++H ++ DLKPENI+ + + L DF L+
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARR 650
R EA + + G + F + +LG G+ G V+ + + A K++ E A R
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 75
Query: 651 KKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSE 710
++ R E ++L + P++ Y F SD + ME+ GG L + +K G+ +
Sbjct: 76 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQ 131
Query: 711 PAARFYVAEVLLALEYL-HMLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTL 767
+ +A V+ L YL +++RD+KP NILV G I L DF +S L S++ +
Sbjct: 132 ILGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190
Query: 768 LKSSSNMDPARVSG 781
+ + S M P R+ G
Sbjct: 191 VGTRSYMSPERLQG 204
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
D+ +NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 110/279 (39%), Gaps = 84/279 (30%)
Query: 686 LVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENIL 743
LV E GG + H+ +++ F+E A V +V AL++LH G+ +RDLKPENIL
Sbjct: 88 LVFEKMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 744 VREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCF 803
VSP + +++G C+ + P PC
Sbjct: 144 CEHPNQ-------------VSPVKICDFGLGSGIKLNGDCSPIS-------TPELLTPCG 183
Query: 804 SPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAA 863
S ++ P++V ++ S +
Sbjct: 184 SAEYMA-------------------PEVVEAFSEEASI------------------YDKR 206
Query: 864 VDWWTFGIFLYELLYGRTPFKGSGNEET----------LANVVMQSLK-----FPDSPL- 907
D W+ G+ LY LL G PF G + N++ +S++ FPD
Sbjct: 207 CDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWA 266
Query: 908 -ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
IS A+DLI LL+++ + RL AA++ QHP+ +G
Sbjct: 267 HISCAAKDLISKLLVRDAKQRL----SAAQVLQHPWVQG 301
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 128/323 (39%), Gaps = 94/323 (29%)
Query: 637 FAIKVMD----NEFLARRKKMPRAQTERE--ILRMLD-HPFLPTLYSQFTSDNLSCLVME 689
+A+K++D F A + R T +E ILR + HP + L + ++ LV +
Sbjct: 45 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 104
Query: 690 YCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGH 749
G+L +++ SE R + +L + LH L +++RDLKPEN
Sbjct: 105 LMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN-------- 154
Query: 750 IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLP 809
+L D D++++ + F +CQ+
Sbjct: 155 -ILLDDDMNIK----------------------------LTDFGF--SCQL--------- 174
Query: 810 ATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGE------GHGAA 863
DP ++R + GT YLAPEII+ G+G
Sbjct: 175 ----------DPGEKLREV---------------CGTPSYLAPEIIECSMNDNHPGYGKE 209
Query: 864 VDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF--PDSPLISFQARDLIRGLLI 921
VD W+ G+ +Y LL G PF L ++ + +F P+ S +DL+ L+
Sbjct: 210 VDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 269
Query: 922 KEPENRLGSQKGAAEIKQHPFFE 944
+P+ R +++ A HPFF+
Sbjct: 270 VQPQKRYTAEEALA----HPFFQ 288
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
+GT EYLAPEI+ + A D W GI Y LL +PF G N+ET N+ ++ +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 903 PDSPL--ISFQARDLIRGLLIKEPENR 927
+ +S A D I+ LL+K PE R
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 8/122 (6%)
Query: 645 EFLARRKKMP--RAQTEREI--LRMLDH-PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVL 699
+FL +R++ RA+ EI L + P + L+ + + + L++EY GG++ L
Sbjct: 60 KFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSL 119
Query: 700 RQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVRED---GHIMLTDFD 756
+L + SE + ++L + YLH +++ DLKP+NIL+ G I + DF
Sbjct: 120 CLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179
Query: 757 LS 758
+S
Sbjct: 180 MS 181
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 24/178 (13%)
Query: 598 HVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVM------------DNE 645
+VR + G IG +F + +KLG G G V L + + AIKV+ DN+
Sbjct: 26 YVRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK 84
Query: 646 FLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQ 703
+ K E +L+ LDHP + L+ F LV E+ GG+L ++ + +
Sbjct: 85 NI--EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK 142
Query: 704 LGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDG---HIMLTDFDLS 758
+C AA + ++L + YLH +++RD+KPENIL+ +I + DF LS
Sbjct: 143 FDEC---DAANI-MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
D + +GT Y+APE++K + + D W+ G+ +Y LL G PF G +++ + V
Sbjct: 202 DYKLRDRLGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE 260
Query: 897 --MQSLKFPDSPLISFQARDLIRGLLIKEPENR 927
F D IS +A++LI+ +L + R
Sbjct: 261 KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKR 293
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT Y APEI++G +G VD W+ GI Y LL G PF ++ + ++ +
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271
Query: 905 SPL---ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEG 945
SP +S A+DL+R L++ +P+ RL + + QHP+ G
Sbjct: 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL----QHPWVTG 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + +LG G VY + GT +A+KV+ KK+ R TE +L L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVR--TEIGVLLRLSHPN 109
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L F + LV+E GG+L R + G +SE A V ++L A+ YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFD-RIVEKGY-YSERDAADAVKQILEAVAYLHEN 167
Query: 731 GVIYRDLKPENILVRE---DGHIMLTDFDLS 758
G+++RDLKPEN+L D + + DF LS
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L ++LG G V I T +A K+++ + L+ R + + E I R+L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 64
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ + + LV + GG+L V R+ +SE A + ++L ++ +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-----YSEADASHCIQQILESVNHC 119
Query: 728 HMLGVIYRDLKPENILV---REDGHIMLTDFDLSL 759
H+ G+++RDLKPEN+L+ + + L DF L++
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
F GT YL+PE+++ + +G VD W G+ LY LL G PF + + F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 903 --PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P+ ++ +A+DLI +L P R+ A+E +HP+
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRI----TASEALKHPWI 264
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 637 FAIKVMDNEFLARRKKMPRAQTE---RE--ILRMLDHPFLPTLYSQFTSDNLSCLVMEYC 691
FA+K++D +A+ P TE RE I ML HP + L ++SD + +V E+
Sbjct: 54 FAVKIVD---VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 110
Query: 692 PGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
G DL ++++ G +SE A Y+ ++L AL Y H +I+RD+KP +L+
Sbjct: 111 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 165
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
VGT ++APE++K E +G VD W G+ L+ LL G PF G+ +E L +++ K+
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT--KERLFEGIIKG-KYK 252
Query: 904 DSPL----ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+P IS A+DL+R +L+ +P R+ E HP+ +
Sbjct: 253 MNPRQWSHISESAKDLVRRMLMLDPAERI----TVYEALNHPWLK 293
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 128/323 (39%), Gaps = 94/323 (29%)
Query: 637 FAIKVMD----NEFLARRKKMPRAQTERE--ILRMLD-HPFLPTLYSQFTSDNLSCLVME 689
+A+K++D F A + R T +E ILR + HP + L + ++ LV +
Sbjct: 32 YAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFD 91
Query: 690 YCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGH 749
G+L +++ SE R + +L + LH L +++RDLKPEN
Sbjct: 92 LMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN-------- 141
Query: 750 IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLP 809
+L D D++++ + F +CQ+
Sbjct: 142 -ILLDDDMNIK----------------------------LTDFGF--SCQL--------- 161
Query: 810 ATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGE------GHGAA 863
DP ++R + GT YLAPEII+ G+G
Sbjct: 162 ----------DPGEKLREV---------------CGTPSYLAPEIIECSMNDNHPGYGKE 196
Query: 864 VDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF--PDSPLISFQARDLIRGLLI 921
VD W+ G+ +Y LL G PF L ++ + +F P+ S +DL+ L+
Sbjct: 197 VDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLV 256
Query: 922 KEPENRLGSQKGAAEIKQHPFFE 944
+P+ R +++ A HPFF+
Sbjct: 257 VQPQKRYTAEEALA----HPFFQ 275
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 637 FAIKVMDNEFLARRKKMPRAQTE---RE--ILRMLDHPFLPTLYSQFTSDNLSCLVMEYC 691
FA+K++D +A+ P TE RE I ML HP + L ++SD + +V E+
Sbjct: 52 FAVKIVD---VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 692 PGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
G DL ++++ G +SE A Y+ ++L AL Y H +I+RD+KP +L+
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 163
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFP 903
VGT ++APE++K E +G VD W G+ L+ LL G PF G+ +E L +++ K+
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT--KERLFEGIIKG-KYK 250
Query: 904 DSPL----ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+P IS A+DL+R +L+ +P R+ E HP+ +
Sbjct: 251 MNPRQWSHISESAKDLVRRMLMLDPAERI----TVYEALNHPWLK 291
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ + +K+G G GTVY A + T AI+ M+ L ++ K E ++R +
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 77
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + + +VMEY GG L + + C E E L ALE+LH
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLH 134
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDF 755
VI+R++K +NIL+ DG + LTDF
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDF 161
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 58/116 (50%), Gaps = 15/116 (12%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
P ++ ++ VGT ++APE++ + +G VD W+ GI E++ G P+ NE L
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYL---NENPLRA 225
Query: 895 VVMQS------LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ + + L+ P+ +S RD + L + E R GS K E+ QH F +
Sbjct: 226 LYLIATNGTPELQNPEK--LSAIFRDFLNRCLEMDVEKR-GSAK---ELIQHQFLK 275
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F L+++G G G V+ T + AIK++D ++ Q E +L D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGD-LHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ Y + + ++MEY GG L +LR F E + E+L L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHS 138
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
I+RD+K N+L+ E G + L DF ++
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVA 167
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTP 882
T + N+FVGT ++APE+I+ + + D W+ GI EL G P
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 9/194 (4%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARR 650
R EA + + G + F + +LG G+ G V+ + + A K++ E A R
Sbjct: 8 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR 67
Query: 651 KKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSE 710
++ R E ++L + P++ Y F SD + ME+ GG L + +K G+ +
Sbjct: 68 NQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQ 123
Query: 711 PAARFYVAEVLLALEYL-HMLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTL 767
+ +A V+ L YL +++RD+KP NILV G I L DF +S L S++ +
Sbjct: 124 ILGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 182
Query: 768 LKSSSNMDPARVSG 781
+ + S M P R+ G
Sbjct: 183 VGTRSYMSPERLQG 196
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
Query: 833 AEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF-KGSGNE-- 889
+ D+ +NSFVGT Y++PE ++G + D W+ G+ L E+ GR P GSG+
Sbjct: 172 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAI 231
Query: 890 -ETLANVVMQ-SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQ---HPFFE 944
E L +V + K P S + S + +D + LIK P R A++KQ H F +
Sbjct: 232 FELLDYIVNEPPPKLP-SGVFSLEFQDFVNKCLIKNPAER-------ADLKQLMVHAFIK 283
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
K+G G G V +A + + L A+K MD RR+ + E I+R H + +Y
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL---FNEVVIMRDYQHENVVEMY 214
Query: 676 SQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
+ + + +VME+ GG L ++ ++ + E A +A VL AL LH GVI+
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLA-VLQALSVLHAQGVIH 270
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCS 762
RD+K ++IL+ DG + L+DF + S
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVS 298
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R VGT ++APE+I +G VD W+ GI + E++ G P+ NE L + M
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMI 359
Query: 899 SLKFP----DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P + +S + + LL+++P R AAE+ +HPF
Sbjct: 360 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 404
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F L ++G G G VY T + AIK++D ++ Q E +L D P+
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGD-LHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
+ + + ++MEY GG L +L+ L + + R E+L L+YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR----EILKGLDYLHS 134
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
I+RD+K N+L+ E G + L DF ++
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVA 163
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTP 882
T + N FVGT ++APE+IK + D W+ GI EL G P
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTEREILRMLDHP 669
F + +LG G+ G V+ + + A K++ E A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL-H 728
++ Y F SD + ME+ GG L + +K G+ + + +A V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLRE 122
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTLLKSSSNMDPARVSG 781
+++RD+KP NILV G I L DF +S L S++ + + + S M P R+ G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 177
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 22/123 (17%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET---- 891
D+ +NSFVGT Y++PE ++G + D W+ G+ L E+ GR P +E
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPP 215
Query: 892 -----LANVVMQS--LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQ---HP 941
L + ++ K P S + S + +D + LIK P R A++KQ H
Sbjct: 216 MAIFELLDYIVNEPPPKLP-SGVFSLEFQDFVNKCLIKNPAER-------ADLKQLMVHA 267
Query: 942 FFE 944
F +
Sbjct: 268 FIK 270
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 11/193 (5%)
Query: 594 EAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKK 652
EA + + G + F + +LG G+ G V + + + A K++ E A R +
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ 60
Query: 653 MPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEP 711
+ R E ++L + P++ Y F SD + ME+ GG L VL++ + + E
Sbjct: 61 IIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK--RIPEEI 115
Query: 712 AARFYVAEVLLALEYL-HMLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTLL 768
+ +A VL L YL +++RD+KP NILV G I L DF +S L S++ + +
Sbjct: 116 LGKVSIA-VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 174
Query: 769 KSSSNMDPARVSG 781
+ S M P R+ G
Sbjct: 175 GTRSYMAPERLQG 187
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
D+ +NSFVGT Y+APE ++G + D W+ G+ L EL GR P
Sbjct: 167 DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F+ L+++G G G VY A + + + AIK M +K E L+ L HP
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 671 LPTLYSQFTSDNLSCLVMEYCPG--GDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ ++ + LVMEYC G DL + +K L + E AA + A L L YLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV--EIAAVTHGA--LQGLAYLH 171
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDF 755
+I+RD+K NIL+ E G + L DF
Sbjct: 172 SHNMIHRDVKAGNILLSEPGLVKLGDF 198
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHG---AAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
A +N FVGT ++APE+I G VD W+ GI EL + P L +
Sbjct: 205 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH 264
Query: 895 VVMQSLKFPDSPLISFQARDLIRGLLIKEPENR 927
+ S S R+ + L K P++R
Sbjct: 265 IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 297
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTEREILRMLDHP 669
F + +LG G+ G V+ + + A K++ E A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL-H 728
++ Y F SD + ME+ GG L + +K G+ + + +A V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLRE 122
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTLLKSSSNMDPARVSG 781
+++RD+KP NILV G I L DF +S L S++ + + + S M P R+ G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 177
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
D+ +NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
++++ ++LG G V T FA K+++ + L+ R + + E I R L HP
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 88
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+ L+ ++ LV + GG+L V R+ +SE A + ++L ++ Y
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-----FYSEADASHCIQQILESIAY 143
Query: 727 LHMLGVIYRDLKPENILV---REDGHIMLTDFDLSLRCSVS 764
H G+++R+LKPEN+L+ + + L DF L++ + S
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 831 LVAEPTDARS-NSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNE 889
L E D+ + + F GT YL+PE++K + + VD W G+ LY LL G PF
Sbjct: 177 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236
Query: 890 ETLANVVMQSLKF--PDSPLISFQARDLIRGLLIKEPENRLGSQKG 933
A + + + P+ ++ +A+ LI +L P+ R+ + +
Sbjct: 237 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 282
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTEREILRMLDHP 669
F + +LG G+ G V+ + + A K++ E A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL-H 728
++ Y F SD + ME+ GG L + +K G+ + + +A V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLRE 122
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTLLKSSSNMDPARVSG 781
+++RD+KP NILV G I L DF +S L S++ + + + S M P R+ G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 177
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
D+ +NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F+ L+++G G G VY A + + + AIK M +K E L+ L HP
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 671 LPTLYSQFTSDNLSCLVMEYCPG--GDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ ++ + LVMEYC G DL + +K L + E AA + A L L YLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV--EIAAVTHGA--LQGLAYLH 132
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDF 755
+I+RD+K NIL+ E G + L DF
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDF 159
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHG---AAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
A +N FVGT ++APE+I G VD W+ GI EL + P L +
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH 225
Query: 895 VVMQSLKFPDSPLISFQARDLIRGLLIKEPENR 927
+ S S R+ + L K P++R
Sbjct: 226 IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 10/136 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL--RMLDH 668
+ L++ +G G+ G L +N L A+K ++ R +K+ A +REI+ R L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVK-----YIERGEKIA-ANVKREIINHRSLRH 74
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + +VMEY GG+L R G+ FSE ARF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 729 MLGVIYRDLKPENILV 744
+ V +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 842 SFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPFKG----SGNEETLANVV 896
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ +T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
PD IS + R LI + + +P R+ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L ++LG G V + +A K+++ + L+ R + + E I R+L HP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 82
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ + + L+ + GG+L V R+ +SE A + ++L A+ +
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-----YSEADASHCIQQILEAVLHC 137
Query: 728 HMLGVIYRDLKPENILVR---EDGHIMLTDFDLSL 759
H +GV++RDLKPEN+L+ + + L DF L++
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 842 SFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
F GT YL+PE+++ + +G VD W G+ LY LL G PF + +
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 242
Query: 902 F--PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
F P+ ++ +A+DLI +L P R+ AAE +HP+
Sbjct: 243 FPSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPWI 282
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
K+G G G V +A + + L A+K MD RR+ + E I+R H + +Y
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL---FNEVVIMRDYQHENVVEMY 137
Query: 676 SQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
+ + + +VME+ GG L ++ ++ + E A +A VL AL LH GVI+
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLA-VLQALSVLHAQGVIH 193
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCS 762
RD+K ++IL+ DG + L+DF + S
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVS 221
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R VGT ++APE+I +G VD W+ GI + E++ G P+ NE L + M
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMI 282
Query: 899 SLKFP----DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P + +S + + LL+++P R AAE+ +HPF
Sbjct: 283 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 327
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 26/123 (21%)
Query: 845 GTHEYLAPEIIKGEGHGAAV-----DWWTFGIFLYELLYGRTPFKGSGNEET-------- 891
G+ EY+APE+++ A++ D W+ G+ LY LL G PF G +
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 892 --LANVVMQSLK-----FPDSPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
N++ +S++ FPD IS A+DLI LL+++ + RL AA++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 943 FEG 945
+G
Sbjct: 299 VQG 301
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 9/77 (11%)
Query: 686 LVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENIL 743
LV E GG + H+ +++ F+E A V +V AL++LH G+ +RDLKPENIL
Sbjct: 88 LVFEKMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 744 VREDGH---IMLTDFDL 757
+ + DFDL
Sbjct: 144 CEHPNQVSPVKICDFDL 160
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
K+G G G V +A + + L A+K MD RR+ + E I+R H + +Y
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL---FNEVVIMRDYQHENVVEMY 94
Query: 676 SQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
+ + + +VME+ GG L ++ ++ + E A +A VL AL LH GVI+
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLA-VLQALSVLHAQGVIH 150
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCS 762
RD+K ++IL+ DG + L+DF + S
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVS 178
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R VGT ++APE+I +G VD W+ GI + E++ G P+ NE L + M
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMI 239
Query: 899 SLKFP----DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P + +S + + LL+++P R AAE+ +HPF
Sbjct: 240 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 284
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTEREILRMLDHP 669
F + +LG G+ G V+ + + A K++ E A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL-H 728
++ Y F SD + ME+ GG L + +K G+ + + +A V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLRE 122
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTLLKSSSNMDPARVSG 781
+++RD+KP NILV G I L DF +S L S++ + + + S M P R+ G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 177
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
D+ +NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTEREILRMLDHP 669
F + +LG G+ G V+ + + A K++ E A R ++ R E ++L + P
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 64
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL-H 728
++ Y F SD + ME+ GG L + +K G+ + + +A V+ L YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLRE 122
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTLLKSSSNMDPARVSG 781
+++RD+KP NILV G I L DF +S L S++ + + + S M P R+ G
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG 177
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
D+ +NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
K+G G G V +A + + L A+K MD RR+ + E I+R H + +Y
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL---FNEVVIMRDYQHENVVEMY 92
Query: 676 SQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
+ + + +VME+ GG L ++ ++ + E A +A VL AL LH GVI+
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLA-VLQALSVLHAQGVIH 148
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCS 762
RD+K ++IL+ DG + L+DF + S
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVS 176
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R VGT ++APE+I +G VD W+ GI + E++ G P+ NE L + M
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMI 237
Query: 899 SLKFP----DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P + +S + + LL+++P R AAE+ +HPF
Sbjct: 238 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 282
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L + +G G V + T +A K+++ + L+ R + + E I R+L H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ-KLEREARICRLLKHSN 64
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ + + LV + GG+L V R+ +SE A + ++L A+ +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-----YSEADASHCIQQILEAVLHC 119
Query: 728 HMLGVIYRDLKPENILVR---EDGHIMLTDFDLSL 759
H +GV++RDLKPEN+L+ + + L DF L++
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 842 SFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
F GT YL+PE+++ E +G VD W G+ LY LL G PF + + +
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 902 F--PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
F P+ ++ +A++LI +L P R+ A E +HP+
Sbjct: 225 FPSPEWDTVTPEAKNLINQMLTINPAKRI----TAHEALKHPW 263
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 20/154 (12%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
K+G G G V +A T A+K MD L ++++ E I+R H + +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMRDYHHDNVVDMY 108
Query: 676 SQFTSDNLSCLVMEYCPGGDL-----HV-LRQKQLGK-CFSEPAARFYVAEVLLALEYLH 728
S + + +VME+ GG L H + ++Q+ C S VL AL YLH
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLS----------VLRALSYLH 158
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLSLRCS 762
GVI+RD+K ++IL+ DG I L+DF + S
Sbjct: 159 NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS 192
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV--V 896
+ VGT ++APE+I +G VD W+ GI + E++ G P+ NE L + +
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY---FNEPPLQAMRRI 253
Query: 897 MQSL--KFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
SL + D +S R + +L++EP R +Q E+ HPF +
Sbjct: 254 RDSLPPRVKDLHKVSSVLRGFLDLMLVREPSQRATAQ----ELLGHPFLK 299
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
K+G G G V +A + + L A+K MD L ++++ E I+R H + +Y
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMY 87
Query: 676 SQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
+ + + +VME+ GG L ++ ++ + E A +A VL AL LH GVI+
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLA-VLQALSVLHAQGVIH 143
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCS 762
RD+K ++IL+ DG + L+DF + S
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVS 171
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R VGT ++APE+I +G VD W+ GI + E++ G P+ NE L + M
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMI 232
Query: 899 SLKFP----DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P + +S + + LL+++P R AAE+ +HPF
Sbjct: 233 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
K+G G G V +A + + L A+K MD L ++++ E I+R H + +Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMY 83
Query: 676 SQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
+ + + +VME+ GG L ++ ++ + E A +A VL AL LH GVI+
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLA-VLQALSVLHAQGVIH 139
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCS 762
RD+K ++IL+ DG + L+DF + S
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVS 167
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R VGT ++APE+I +G VD W+ GI + E++ G P+ NE L + M
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY---FNEPPLKAMKMI 228
Query: 899 SLKFP----DSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P + +S + + LL+++P R AAE+ +HPF
Sbjct: 229 RDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
EY APE+ + + A D W+ G +Y LL G PF N++ + N++ F +
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 908 --ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
IS +A D + LL+KE ++R+ A+E QHP+ +
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLK 262
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 656 AQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF 715
+ E IL + H + L+ F S ++ E+ G D+ R +E
Sbjct: 48 VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI-FERINTSAFELNEREIVS 106
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENIL--VREDGHIMLTDF 755
YV +V AL++LH + + D++PENI+ R I + +F
Sbjct: 107 YVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEF 148
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL--RMLDH 668
+ L++ +G G+ G L N L A+K ++ R +K+ +REI+ R L H
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVK-----YIERGEKIDE-NVKREIINHRSLRH 74
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + +VMEY GG+L R G+ FSE ARF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGR-FSEDEARFFFQQLISGVSYAH 132
Query: 729 MLGVIYRDLKPENILVREDG----HIMLTDFDLS 758
+ V +RDLK EN L+ DG + + DF S
Sbjct: 133 AMQVAHRDLKLENTLL--DGSPAPRLKIADFGYS 164
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 842 SFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPFKG----SGNEETLANVV 896
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ +T+ ++
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
PD IS + R LI + + +P R+ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 610 HFNLLQK-LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
H LL LG G V+ T LFAIKV +N ++ + + E E+L+ L+H
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNN--ISFLRPVDVQMREFEVLKKLNH 66
Query: 669 PFLPTLYS--QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA--EVLLAL 724
+ L++ + T+ L+ME+CP G L+ + ++ + P + F + +V+ +
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP-SNAYGLPESEFLIVLRDVVGGM 125
Query: 725 EYLHMLGVIYRDLKPENIL--VREDGHIM--LTDF 755
+L G+++R++KP NI+ + EDG + LTDF
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 837 DARSNSFVGTHEYLAPEIIK--------GEGHGAAVDWWTFGIFLYELLYGRTPFK 884
D + GT EYL P++ + + +GA VD W+ G+ Y G PF+
Sbjct: 169 DEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ + ++LG G G V T AIK E + ++ R E +I++ L+HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE--RWCLEIQIMKKLNHPN 73
Query: 671 L------PTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLA 723
+ P + ++L L MEYC GGDL L Q + E R ++++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 724 LEYLHMLGVIYRDLKPENILVR 745
L YLH +I+RDLKPENI+++
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQ 155
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
FVGT +YLAPE+++ + + VD+W+FG +E + G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ + ++LG G G V T AIK E + ++ R E +I++ L+HP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE--RWCLEIQIMKKLNHPN 74
Query: 671 L------PTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLA 723
+ P + ++L L MEYC GGDL L Q + E R ++++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 724 LEYLHMLGVIYRDLKPENILVR 745
L YLH +I+RDLKPENI+++
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQ 156
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
FVGT +YLAPE+++ + + VD+W+FG +E + G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 112
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 215 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 270
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 79/174 (45%), Gaps = 17/174 (9%)
Query: 587 MSADVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF 646
M+ DV+ A R+ +L + LG G TVY A TN + AIK +
Sbjct: 1 MALDVKSRAKRYEKLDF-------------LGEGQFATVYKARDKNTNQIVAIKKIKLGH 47
Query: 647 LARRKKMPRAQTEREI--LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQL 704
+ K REI L+ L HP + L F + LV ++ DL V+ +
Sbjct: 48 RSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDN- 105
Query: 705 GKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ + Y+ L LEYLH +++RDLKP N+L+ E+G + L DF L+
Sbjct: 106 SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA 159
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPF 883
V T Y APE++ G +G VD W G L ELL R PF
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPF 212
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 112
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 270
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 610 HFNLLQK-LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
H LL LG G V+ T LFAIKV +N ++ + + E E+L+ L+H
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNN--ISFLRPVDVQMREFEVLKKLNH 66
Query: 669 PFLPTLYS--QFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA--EVLLAL 724
+ L++ + T+ L+ME+CP G L+ + ++ + P + F + +V+ +
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEP-SNAYGLPESEFLIVLRDVVGGM 125
Query: 725 EYLHMLGVIYRDLKPENIL--VREDGHIM--LTDF 755
+L G+++R++KP NI+ + EDG + LTDF
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 837 DARSNSFVGTHEYLAPEIIK--------GEGHGAAVDWWTFGIFLYELLYGRTPFK 884
D + S GT EYL P++ + + +GA VD W+ G+ Y G PF+
Sbjct: 169 DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 116
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 274
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 114
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 272
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 157
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 315
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 106
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 264
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL--RMLDH 668
+ L++ +G G+ G L +N L A+K ++ R +K+ +REI+ R L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVK-----YIERGEKIDE-NVKREIINHRSLRH 74
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + +VMEY GG+L R G+ FSE ARF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 729 MLGVIYRDLKPENILV 744
+ V +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 842 SFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPFKG----SGNEETLANVV 896
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ +T+ ++
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 234
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
PD IS + R LI + + +P R+ EI+ H +F
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-ARRKKMPRAQTEREILRMLDHP 669
F + +LG G+ G V+ + + A K++ E A R ++ R E ++L + P
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR---ELQVLHECNSP 67
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL-H 728
++ Y F SD + ME+ GG L + +K G+ + + +A V+ L YL
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLRE 125
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTLLKSSSNMDPARVSG 781
+++RD+KP NILV G I L DF +S L ++ + + S M P R+ G
Sbjct: 126 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQG 180
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D +N FVGT Y++PE ++G + D W+ G+ L E+ GR P E L +
Sbjct: 159 IDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYI 218
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQ---HPFFE 944
V + S + S + +D + LIK P R A++KQ H F +
Sbjct: 219 VNEPPPKLPSAVFSLEFQDFVNKCLIKNPAER-------ADLKQLMVHAFIK 263
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL--RMLDH 668
+ L++ +G G+ G L +N L A+K ++ R +K+ +REI+ R L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVK-----YIERGEKIDE-NVKREIINHRSLRH 74
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + +VMEY GG+L R G+ FSE ARF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 729 MLGVIYRDLKPENILV 744
+ V +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 844 VGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPFKG----SGNEETLANVVMQ 898
VGT Y+APE++ K E G D W+ G+ LY +L G PF+ +T+ ++
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 236
Query: 899 SLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
PD IS + R LI + + +P R+ EI+ H +F
Sbjct: 237 QYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 10/136 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL--RMLDH 668
+ L++ +G G+ G L +N L A+K ++ R +K+ +REI+ R L H
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVK-----YIERGEKIDE-NVKREIINHRSLRH 73
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + +VMEY GG+L R G+ FSE ARF+ +++ + Y H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGR-FSEDEARFFFQQLISGVSYCH 131
Query: 729 MLGVIYRDLKPENILV 744
+ V +RDLK EN L+
Sbjct: 132 AMQVCHRDLKLENTLL 147
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 842 SFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPFKG----SGNEETLANVV 896
S VGT Y+APE++ K E G D W+ G+ LY +L G PF+ +T+ ++
Sbjct: 174 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL 233
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
PD IS + R LI + + +P R+ EI+ H +F
Sbjct: 234 NVQYAIPDYVHISPECRHLISRIFVADPAKRI----SIPEIRNHEWF 276
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+++ ++LG G V T FA K+++ + L+ R + + E I R L HP
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPN 66
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L+ ++ LV + GG+L + +SE A + ++L ++ Y H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLSLRCSVS 764
G+++R+LKPEN+L+ + + L DF L++ + S
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 831 LVAEPTDARS-NSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNE 889
L E D+ + + F GT YL+PE++K + + VD W G+ LY LL G PF
Sbjct: 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
Query: 890 ETLANVVMQSLKF--PDSPLISFQARDLIRGLLIKEPENRLGSQKG 933
A + + + P+ ++ +A+ LI +L P+ R+ + +
Sbjct: 214 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 259
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+++ ++LG G V T FA K+++ + L+ R + + E I R L HP
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPN 65
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L+ ++ LV + GG+L + +SE A + ++L ++ Y H
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLSL 759
G+++R+LKPEN+L+ + + L DF L++
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 831 LVAEPTDARS-NSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNE 889
L E D+ + + F GT YL+PE++K + + VD W G+ LY LL G PF
Sbjct: 153 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 212
Query: 890 ETLANVVMQSLKF--PDSPLISFQARDLIRGLLIKEPENRLGSQKG 933
A + + + P+ ++ +A+ LI +L P+ R+ + +
Sbjct: 213 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 83
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 241
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+++ ++LG G V T FA K+++ + L+ R + + E I R L HP
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPN 66
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ L+ ++ LV + GG+L + +SE A + ++L ++ Y H
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLSL 759
G+++R+LKPEN+L+ + + L DF L++
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 831 LVAEPTDARS-NSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNE 889
L E D+ + + F GT YL+PE++K + + VD W G+ LY LL G PF
Sbjct: 154 LAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
Query: 890 ETLANVVMQSLKF--PDSPLISFQARDLIRGLLIKEPENRLGSQKG 933
A + + + P+ ++ +A+ LI +L P+ R+ + +
Sbjct: 214 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 259
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 14/137 (10%)
Query: 637 FAIKVMDNEFLARRK-----KMPRAQTERE--ILRML-DHPFLPTLYSQFTSDNLSCLVM 688
FA+K+M E A R + R T RE ILR + HP + TL + S + LV
Sbjct: 122 FAVKIM--EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVF 179
Query: 689 EYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDG 748
+ G+L +++ SE R + +L A+ +LH +++RDLKPENIL+ ++
Sbjct: 180 DLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNM 237
Query: 749 HIMLTDFDLSLRCSVSP 765
I L+DF S C + P
Sbjct: 238 QIRLSDFGFS--CHLEP 252
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
Query: 845 GTHEYLAPEIIKGE------GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
GT YLAPEI+K G+G VD W G+ L+ LL G PF L ++
Sbjct: 261 GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG 320
Query: 899 SLKF--PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+F P+ S +DLI LL +PE RL +++ QHPFFE
Sbjct: 321 QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL----QHPFFE 364
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 86
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 189 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 244
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 90
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 90
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 248
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 97
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 200 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 255
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 26/174 (14%)
Query: 593 WEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK 652
W+ HV +++G+ + L++KLG G V+ A I N +K++ K
Sbjct: 24 WDYASHV-VEWGN--QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL--------KP 72
Query: 653 MPRAQTEREILRMLDH----PFLPTLYSQFTSDNLS---CLVMEYCPGGDLHVLRQKQLG 705
+ + + +REI ++L++ P + TL + D +S LV E+ D KQL
Sbjct: 73 VKKNKIKREI-KILENLRGGPNIITL-ADIVKDPVSRTPALVFEHVNNTDF-----KQLY 125
Query: 706 KCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV-REDGHIMLTDFDLS 758
+ ++ RFY+ E+L AL+Y H +G+++RD+KP N+++ E + L D+ L+
Sbjct: 126 QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 91
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 194 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 249
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 70/152 (46%), Gaps = 5/152 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIK-VMDNEFLARRKKMPRAQTEREILRML 666
+ + + K+G G G V+ T + AIK +++E KK+ A E +L+ L
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKI--ALREIRMLKQL 59
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP L L F LV EYC LH L + Q G E + + L A+ +
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG--VPEHLVKSITWQTLQAVNF 117
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H I+RD+KPENIL+ + I L DF +
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFA 149
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 35/147 (23%)
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKGEG-HGAAVDWWTFGIFLYELLYGRTPFKGSGN 888
+L+ P+D + V T Y +PE++ G+ +G VD W G ELL G + G +
Sbjct: 150 RLLTGPSDYYDDE-VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSD 208
Query: 889 EETL-------------------ANVVMQSLKFPDS----------PLISFQARDLIRGL 919
+ L N +K PD P IS+ A L++G
Sbjct: 209 VDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGC 268
Query: 920 LIKEPENRLGSQKGAAEIKQHPFFEGL 946
L +P RL + ++ HP+FE +
Sbjct: 269 LHMDPTERLTCE----QLLHHPYFENI 291
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 607 GLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREIL 663
G+ +F ++K+G G G VY A T + A+K +D E + +P A E +L
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLL 56
Query: 664 RMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLA 723
+ L+HP + L ++N LV E+ DL P + Y+ ++L
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L + H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 79
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 182 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 237
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 78
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 78
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 78
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 82
Query: 675 YSQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S D + LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 185 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 240
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
K+G G G V LA + A+K+MD L ++++ E I+R H + +Y
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQHFNVVEMY 108
Query: 676 SQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
+ ++ME+ GG L ++ Q +L +E VL AL YLH GVI+
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVRL----NEEQIATVCEAVLQALAYLHAQGVIH 164
Query: 735 RDLKPENILVREDGHIMLTDF 755
RD+K ++IL+ DG + L+DF
Sbjct: 165 RDIKSDSILLTLDGRVKLSDF 185
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 17/124 (13%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
+ VGT ++APE+I + VD W+ GI + E++ G P+ + M+
Sbjct: 197 KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-----MK 251
Query: 899 SL------KFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIR 952
L K +S +S RD + +L+++P+ R +Q E+ HPF L L
Sbjct: 252 RLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQ----ELLDHPFL--LQTGLPE 305
Query: 953 CAIP 956
C +P
Sbjct: 306 CLVP 309
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 128/316 (40%), Gaps = 70/316 (22%)
Query: 594 EAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKM 653
+ I H + G + F +++K+G G G V L + I +A+KV+ N KK
Sbjct: 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-----IKKY 74
Query: 654 PR-AQTEREILRMLDHPFLPT-----LYSQFTSDNLSCLVMEYCPGG-DLHVLRQKQLGK 706
R A+ E +IL+ + + + + +F + CL+ E P G L+ + +
Sbjct: 75 TRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYN 132
Query: 707 CFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTD--FDLSLRCSVS 764
F + Y E+L AL YL + + + DLKPEN I+L D F+ SL
Sbjct: 133 GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPEN--------ILLDDPYFEKSLITVRR 184
Query: 765 PTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQ 824
T D ++ T+S I+ I+ C AT K+
Sbjct: 185 VT--------DGKKIQIYRTKSTGIK--LIDFGC-----------ATFKS---------- 213
Query: 825 IRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFK 884
S + T +Y APE+I G + D W+FG L EL G F+
Sbjct: 214 -------------DYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
Query: 885 GSGNEETLANVVMQSL 900
+ E LA +M+S+
Sbjct: 261 THEHMEHLA--MMESI 274
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVM----DNEFLARRKKMPRAQTEREILRMLDHP 669
LQ +G G G V A T AIK + +E A+R A E +L+ + H
Sbjct: 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR-----AYRELRLLKHMRHE 84
Query: 670 FLPTLYSQFTSDNL------SCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLL 722
+ L FT D LVM + G DL +++ ++LG E +F V ++L
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLG----EDRIQFLVYQMLK 139
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L Y+H G+I+RDLKP N+ V ED + + DF L+
Sbjct: 140 GLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 36/155 (23%)
Query: 824 QIRSLPQLVAEPTDARSNSFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTP 882
+++ L +A D+ V T Y APE+I + VD W+ G + E++ G+T
Sbjct: 166 ELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 225
Query: 883 FKGSGNEETLANVVMQSLKFPDSPLI----SFQARDLIRGL------------------- 919
FKGS + + L +M+ P + + S +A++ ++GL
Sbjct: 226 FKGSDHLDQLKE-IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLA 284
Query: 920 -------LIKEPENRLGSQKGAAEIKQHPFFEGLN 947
L+ + E R+ A E HP+FE L+
Sbjct: 285 VNLLEKMLVLDAEQRV----TAGEALAHPYFESLH 315
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L ++LG G V + +A +++ + L+ R + + E I R+L HP
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ-KLEREARICRLLKHPN 71
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ + + L+ + GG+L V R+ +SE A + ++L A+ +
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY-----YSEADASHCIQQILEAVLHC 126
Query: 728 HMLGVIYRDLKPENILVR---EDGHIMLTDFDLSL 759
H +GV++R+LKPEN+L+ + + L DF L++
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
F GT YL+PE+++ + +G VD W G+ LY LL G PF + + F
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 232
Query: 903 --PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
P+ ++ +A+DLI +L P R+ AAE +HP+
Sbjct: 233 PSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPW 270
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK-VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
+G G G VY A+L + L AIK V+ + R E +I+R LDH + L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVRLR 79
Query: 676 SQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYLH 728
F S D + LV++Y P V R K + Y+ ++ +L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 729 MLGVIYRDLKPENILVREDGHIM-LTDF 755
G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VY A+L + L AIK + D F R E +I+R LDH + L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---------ELQIMRKLDHCNIVRL 78
Query: 675 YSQFTSDN------LSCLVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYL 727
F S LV++Y P V R K + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 728 HMLGVIYRDLKPENILVREDGHIM-LTDF 755
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S + + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
+G G G V+ A+L+ ++ + KV+ ++ R E +I+R++ HP + L +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR--------ELQIMRIVKHPNVVDLKA 99
Query: 677 QFTSDN------LSCLVMEYCPGGDLHVLRQ-KQLGKCFSEPAARFYVAEVLLALEYLHM 729
F S+ LV+EY P R +L + + Y+ ++L +L Y+H
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 730 LGVIYRDLKPENILVR-EDGHIMLTDF 755
+G+ +RD+KP+N+L+ G + L DF
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDF 186
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 59/157 (37%), Gaps = 32/157 (20%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV---- 896
S + + Y APE+I G + +D W+ G + EL+ G+ F G + L ++
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG 259
Query: 897 -------------MQSLKFPD----------SPLISFQARDLIRGLLIKEPENRLGSQKG 933
KFP P A DLI LL P RL
Sbjct: 260 TPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL----T 315
Query: 934 AAEIKQHPFFEGLNWALIRCAIPPELPDFYDYGIQDM 970
A E HPFF+ L R ELP +++ +++
Sbjct: 316 AIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEEL 352
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 17/192 (8%)
Query: 604 GSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK---MPRAQTER 660
G I + ++ KLG G + TVYLAE N AIK + F+ R+K + R + E
Sbjct: 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI---FIPPREKEETLKRFEREV 62
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + ++ D+ LVMEY G L + G + A F ++
Sbjct: 63 HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH-GPLSVDTAINF-TNQI 120
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNM------ 774
L +++ H + +++RD+KP+NIL+ D + L FD + ++S T L ++++
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNILI--DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 775 -DPARVSGPCTE 785
P + G T+
Sbjct: 179 FSPEQAKGEATD 190
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 828 LPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
+ + ++E + ++N +GT +Y +PE KGE D ++ GI LYE+L G PF G
Sbjct: 157 IAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG-- 214
Query: 888 NEETLANVVMQSLK 901
ET ++ ++ ++
Sbjct: 215 --ETAVSIAIKHIQ 226
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 60
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKPEN+L+ +G I L DF L+
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 225
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 286 A----HPFFQ 291
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP-RAQTEREILRMLDHPFLP 672
L KLG G TVY + T+ L A+K + L + P A E +L+ L H +
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIR---LEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDLHVLRQ--KQLGKCFSEPAARFYVAEVLLALEYLHML 730
TL+ ++ LV EY L+Q G + + ++ ++L L Y H
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDKD----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
V++RDLKP+N+L+ E G + L DF L+ R PT
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLA-RAKSIPT 154
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 53/141 (37%), Gaps = 34/141 (24%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET-- 891
PT N V T Y P+I+ G + +D W G YE+ GR F GS EE
Sbjct: 153 PTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH 211
Query: 892 -----------------LANVVMQSLKFPD---------SPLISFQARDLIRGLLIKEPE 925
L+N ++ +P +P + DL+ LL E
Sbjct: 212 FIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGR 271
Query: 926 NRLGSQKGAAEIKQHPFFEGL 946
NR+ A + +HPFF L
Sbjct: 272 NRI----SAEDAMKHPFFLSL 288
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 59
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKPEN+L+ +G I L DF L+
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 224
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 285 A----HPFFQ 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 58
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKPEN+L+ +G I L DF L+
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 223
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 284 A----HPFFQ 289
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 58
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKPEN+L+ +G I L DF L+
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 223
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 284 A----HPFFQ 289
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL--RMLDH 668
++ ++ +G G+ G L T L A+K ++ R +REI+ R L H
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE------RGAAIDENVQREIINHRSLRH 75
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + ++MEY GG+L+ R G+ FSE ARF+ ++L + Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYE-RICNAGR-FSEDEARFFFQQLLSGVSYCH 133
Query: 729 MLGVIYRDLKPENILV 744
+ + +RDLK EN L+
Sbjct: 134 SMQICHRDLKLENTLL 149
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 842 SFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPFKG----SGNEETLANVV 896
S VGT Y+APE++ + E G D W+ G+ LY +L G PF+ +T+ ++
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 897 MQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
PD IS + LI + + +P R+ EIK H +F
Sbjct: 236 SVKYSIPDDIRISPECCHLISRIFVADPATRI----SIPEIKTHSWF 278
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 125/342 (36%), Gaps = 97/342 (28%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 131
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 132 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 186
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESN 787
+ +RD+KPEN+L R + + LTDF + + +L
Sbjct: 187 NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL-------------------- 226
Query: 788 CIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTH 847
PC++P ++
Sbjct: 227 -----------TTPCYTPYYVAP------------------------------------- 238
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFP 903
E L PE + + D W+ G+ +Y LL G PF + + M +FP
Sbjct: 239 EVLGPE-----KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 293
Query: 904 DSPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+ +S + + LIR LL EP R+ E HP+
Sbjct: 294 NPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 331
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK-VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
+G G G VY A+L + L AIK V+ + R E +I+R LDH + L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVRLR 79
Query: 676 SQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYLH 728
F S D + LV++Y P V R K + Y+ ++ +L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 729 MLGVIYRDLKPENILVREDGHIM-LTDF 755
G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 60
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 225
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 286 A----HPFFQ 291
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIK-VMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
+G G G VY A+L + L AIK V+ + R E +I+R LDH + L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKLDHCNIVRLR 79
Query: 676 SQFTS-----DNLSC-LVMEYCPGGDLHVLRQKQLGK-CFSEPAARFYVAEVLLALEYLH 728
F S D + LV++Y P V R K + Y+ ++ +L Y+H
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 729 MLGVIYRDLKPENILVREDGHIM-LTDF 755
G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 140 SFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 842 SFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S++ + Y APE+I G + +++D W+ G L ELL G+ F G + L ++
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 236
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
SI + L + +G G V A AIK ++ E + M E + +
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE--KCQTSMDELLKEIQAMS 68
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-----HVL-RQKQLGKCFSEPAARFYVA 718
HP + + Y+ F + LVM+ GG + H++ + + E +
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
EVL LEYLH G I+RD+K NIL+ EDG + + DF +S
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 25/119 (21%)
Query: 841 NSFVGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+FVGT ++APE+++ G+ D W+FGI EL G P+ ++ V+M +
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY----HKYPPMKVLMLT 239
Query: 900 LK---------FPDSPLI-----SFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
L+ D ++ SF R +I L K+PE R AAE+ +H FF+
Sbjct: 240 LQNDPPSLETGVQDKEMLKKYGKSF--RKMISLCLQKDPEKR----PTAAELLRHKFFQ 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREI 662
+ + +F ++K+G G G VY A T + A+K +D E + +P A E +
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISL 59
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L+ L+HP + L ++N LV E+ DL P + Y+ ++L
Sbjct: 60 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L + H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 226
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 286
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 287 A----HPFFQ 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKPEN+L+ +G I L DF L+
Sbjct: 117 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 71/160 (44%), Gaps = 8/160 (5%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
SI + L + +G G V A AIK ++ E + M E + +
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE--KCQTSMDELLKEIQAMS 63
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-----HVL-RQKQLGKCFSEPAARFYVA 718
HP + + Y+ F + LVM+ GG + H++ + + E +
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
EVL LEYLH G I+RD+K NIL+ EDG + + DF +S
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 25/119 (21%)
Query: 841 NSFVGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+FVGT ++APE+++ G+ D W+FGI EL G P+ ++ V+M +
Sbjct: 179 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY----HKYPPMKVLMLT 234
Query: 900 LK---------FPDSPLI-----SFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
L+ D ++ SF R +I L K+PE R AAE+ +H FF+
Sbjct: 235 LQNDPPSLETGVQDKEMLKKYGKSF--RKMISLCLQKDPEKR----PTAAELLRHKFFQ 287
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 12/155 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L ++LG G V +A K+++ + L+ R + + E I R+L HP
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 91
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLH---VLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
+ L+ + + LV + GG+L V R+ +SE A + ++L ++ ++
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY-----YSEADASHCIHQILESVNHI 146
Query: 728 HMLGVIYRDLKPENILVR---EDGHIMLTDFDLSL 759
H +++RDLKPEN+L+ + + L DF L++
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
F GT YL+PE+++ + +G VD W G+ LY LL G PF + + + F
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDF 252
Query: 903 --PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPF 942
P+ ++ +A++LI +L P R+ + + +HP+
Sbjct: 253 PSPEWDTVTPEAKNLINQMLTINPAKRITADQAL----KHPW 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 9/159 (5%)
Query: 604 GSIG-LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTE 659
G +G + +F ++K+G G G VY A T + A+K +D E + +P A E
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIRE 56
Query: 660 REILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
+L+ L+HP + L ++N LV E+ DL P + Y+ +
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 720 VLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+L L + H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 226
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 227 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 286
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 287 A----HPFFQ 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 6/151 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
N+ +K+G G GTV+ AE G++ I +M+ +F A R + E I++ L HP
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKI-LMEQDFHAER--VNEFLREVAIMKRLRHPN 95
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA-EVLLALEYLHM 729
+ T +V EY G L+ L K + + R +A +V + YLH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 730 LG--VIYRDLKPENILVREDGHIMLTDFDLS 758
+++RDLK N+LV + + + DF LS
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPD 904
GT E++APE+++ E D ++FG+ L+EL + P+ + +A V + +
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI 260
Query: 905 SPLISFQARDLIRGLLIKEPENR 927
++ Q +I G EP R
Sbjct: 261 PRNLNPQVAAIIEGCWTNEPWKR 283
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 56
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 221
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 282 A----HPFFQ 287
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 59
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 224
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 285 A----HPFFQ 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 64
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 229
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 230 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 289
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 290 A----HPFFQ 295
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 60
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 225
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 286 A----HPFFQ 291
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 60
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 225
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 286 A----HPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 59
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 224
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 285 A----HPFFQ 290
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 64
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 65 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 33.9 bits (76), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 229
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 230 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 289
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 290 A----HPFFQ 295
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 60
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 225
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 286 A----HPFFQ 291
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 655 RAQTEREILRMLDHPFLPTLYSQFT-SDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAA 713
RA E +L+ + H + L FT + +L Y + QK +G FSE
Sbjct: 87 RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKI 146
Query: 714 RFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ V ++L L+Y+H GV++RDLKP N+ V ED + + DF L+
Sbjct: 147 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 38/145 (26%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A DA +V T Y APE+I H VD W+ G + E+L G+T FKG +
Sbjct: 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 891 TLANVV----------------------MQSLKFPDSPLISF---------QARDLIRGL 919
L ++ +QSL P +P F QA DL+ +
Sbjct: 250 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL--PQTPRKDFTQLFPRASPQAADLLEKM 307
Query: 920 LIKEPENRLGSQKGAAEIKQHPFFE 944
L + + RL AA+ HPFFE
Sbjct: 308 LELDVDKRL----TAAQALTHPFFE 328
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 58
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 223
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 284 A----HPFFQ 289
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRML 666
+ + L+K+G G G VY A+ + A+K + + A + +P A E +L+ L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLD--AEDEGIPSTAIREISLLKEL 76
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + +L S+ LV E+ VL + + G + + Y+ ++L + +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAH 134
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H +++RDLKP+N+L+ DG + L DF L+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
V T Y AP+++ G + + +VD W+ G E++ G+ F G +++ L +
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 897 -------MQSL------------KFPDSPLI-SF--QARDLIRGLLIKEPENRLGSQKGA 934
+Q L K P S +I F + DL+ +L +P R+ A
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI----SA 295
Query: 935 AEIKQHPFFEGLN 947
+ HP+F+ L+
Sbjct: 296 RDAMNHPYFKDLD 308
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 604 GSIGLR-----HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
G++G++ F+ L+K+G G+ G+V+ C++AIK R K P A +
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---------RSKKPLAGS 51
Query: 659 --EREILRML-------DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH--VLRQKQLGKC 707
E+ LR + H + +S + D+ + EYC GG L + ++
Sbjct: 52 VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 111
Query: 708 FSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
F E + + +V L Y+H + +++ D+KP NI +
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 56
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 221
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 282 A----HPFFQ 287
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 58
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 223
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 284 A----HPFFQ 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 58
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 59 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 223
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 224 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 283
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 284 A----HPFFQ 289
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
+LG G G V+ E T A+K + E + M A L P + LY
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAG--------LTSPRIVPLY 151
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ ME GG L L ++Q C E A +Y+ + L LEYLH +++
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 736 DLKPENILVREDG-HIMLTDF 755
D+K +N+L+ DG H L DF
Sbjct: 210 DVKADNVLLSSDGSHAALCDF 230
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
GT ++APE++ G A VD W+ + +L G P+
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 59
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 224
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 225 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 284
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 285 A----HPFFQ 290
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 655 RAQTEREILRMLDHPFLPTLYSQFT-SDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAA 713
RA E +L+ + H + L FT + +L Y + QK +G FSE
Sbjct: 69 RAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKI 128
Query: 714 RFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ V ++L L+Y+H GV++RDLKP N+ V ED + + DF L+
Sbjct: 129 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 38/145 (26%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A DA +V T Y APE+I H VD W+ G + E+L G+T FKG +
Sbjct: 172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 891 TLANVV----------------------MQSLKFPDSPLISF---------QARDLIRGL 919
L ++ +QSL P +P F QA DL+ +
Sbjct: 232 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSL--PQTPRKDFTQLFPRASPQAADLLEKM 289
Query: 920 LIKEPENRLGSQKGAAEIKQHPFFE 944
L + + RL AA+ HPFFE
Sbjct: 290 LELDVDKRL----TAAQALTHPFFE 310
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 60
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 225
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 286 A----HPFFQ 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 114/310 (36%), Gaps = 89/310 (28%)
Query: 603 YGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD---NEFLARRKKMPRAQTE 659
Y I L ++G G GTVY + G + +KV+D +F A R E
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFR-------NE 82
Query: 660 REILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYV 717
+LR H + T DNL+ +V ++C G L H+ Q+ + F
Sbjct: 83 VAVLRKTRHVNILLFMGYMTKDNLA-IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT 141
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
A+ ++YLH +I+RD+K NI + E + + D
Sbjct: 142 AQ---GMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGD----------------------- 175
Query: 778 RVSGPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTD 837
F AT K+R S Q V +PT
Sbjct: 176 -----------------------------FGLATVKSR----------WSGSQQVEQPT- 195
Query: 838 ARSNSFVGTHEYLAPEIIKGEGHG---AAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
G+ ++APE+I+ + + D +++GI LYEL+ G P+ N + +
Sbjct: 196 -------GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF 248
Query: 895 VVMQSLKFPD 904
+V + PD
Sbjct: 249 MVGRGYASPD 258
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 56
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 221
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 282 A----HPFFQ 287
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A T + A+K +D E + +P A E +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLK 56
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 221
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 282 A----HPFFQ 287
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRML 666
+ + L+K+G G G VY A+ + A+K + + A + +P A E +L+ L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLD--AEDEGIPSTAIREISLLKEL 76
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP + +L S+ LV E+ VL + + G + + Y+ ++L + +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAH 134
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H +++RDLKP+N+L+ DG + L DF L+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 33/133 (24%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
V T Y AP+++ G + + +VD W+ G E++ G+ F G +++ L +
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 897 -------MQSL------------KFPDSPLI-SF--QARDLIRGLLIKEPENRLGSQKGA 934
+Q L K P S +I F + DL+ +L +P R+ A
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI----SA 295
Query: 935 AEIKQHPFFEGLN 947
+ HP+F+ L+
Sbjct: 296 RDAMNHPYFKDLD 308
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD--NEFLARRKKMPRAQTEREILRM 665
L F +Q LG G G V+ A+ +C +AIK + N LAR K M E + L
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM----REVKALAK 59
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHV---------LRQKQLGKCFSEPAARFY 716
L+HP + ++ + N + + P L++ L+ G+C E R
Sbjct: 60 LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119
Query: 717 VAEVLL----ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+ L A+E+LH G+++RDLKP NI D + + DF L
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 835 PTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNE-ETLA 893
P AR VGT Y++PE I G + VD ++ G+ L+ELLY PF TL
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238
Query: 894 NVVMQSLKFPDSPLIS 909
+V ++LKFP PL +
Sbjct: 239 DV--RNLKFP--PLFT 250
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 95/252 (37%), Gaps = 83/252 (32%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
++ME GG+L Q++ + F+E A + ++ A+++LH + +RD+KPEN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 745 --REDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPC 802
+D + LTDF + T N + Q PC
Sbjct: 163 SKEKDAVLKLTDFGFAKE-----------------------TTQNAL---------QTPC 190
Query: 803 FSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGA 862
++P + +APE++ E +
Sbjct: 191 YTPYY------------------------------------------VAPEVLGPEKYDK 208
Query: 863 AVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPDSPL--ISFQARDLI 916
+ D W+ G+ +Y LL G PF + + + + FP+ +S A+ LI
Sbjct: 209 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI 268
Query: 917 RGLLIKEPENRL 928
R LL +P RL
Sbjct: 269 RLLLKTDPTERL 280
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 95/252 (37%), Gaps = 83/252 (32%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
++ME GG+L Q++ + F+E A + ++ A+++LH + +RD+KPEN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 745 --REDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIEPTCQVPC 802
+D + LTDF + T N + Q PC
Sbjct: 144 SKEKDAVLKLTDFGFAKE-----------------------TTQNAL---------QTPC 171
Query: 803 FSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGA 862
++P + +APE++ E +
Sbjct: 172 YTPYY------------------------------------------VAPEVLGPEKYDK 189
Query: 863 AVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPDSPL--ISFQARDLI 916
+ D W+ G+ +Y LL G PF + + + + FP+ +S A+ LI
Sbjct: 190 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI 249
Query: 917 RGLLIKEPENRL 928
R LL +P RL
Sbjct: 250 RLLLKTDPTERL 261
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
+LG G G V+ E T A+K + E + M A L P + LY
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAG--------LTSPRIVPLY 132
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ ME GG L L ++Q C E A +Y+ + L LEYLH +++
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 736 DLKPENILVREDG-HIMLTDF 755
D+K +N+L+ DG H L DF
Sbjct: 191 DVKADNVLLSSDGSHAALCDF 211
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 837 DARSNSFV-GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPF 883
D + ++ GT ++APE++ G A VD W+ + +L G P+
Sbjct: 225 DLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMP-RAQTEREILRMLD 667
F ++K+G G G VY A T + A+K +D E + +P A E +L+ L+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE----TEGVPSTAIREISLLKELN 59
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
HP + L ++N LV E+ DL P + Y+ ++L L +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 221
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 282 A----HPFFQ 287
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 655 RAQTEREILRMLDHPFLPTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKCFS 709
R E +L+ L H + L FT D ++ G DL+ + + Q S
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQ---ALS 129
Query: 710 EPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ +F V ++L L+Y+H G+I+RDLKP N+ V ED + + DF L+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 823 AQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRT 881
+++R L +A D +V T Y APEI+ H VD W+ G + ELL G+
Sbjct: 168 SELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
Query: 882 PFKGSGNEETLANVV 896
F GS + L ++
Sbjct: 228 LFPGSDYIDQLKRIM 242
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT--EREILRML-- 666
F+ L+K+G G+ G+V+ C++AIK R K P A + E+ LR +
Sbjct: 9 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK---------RSKKPLAGSVDEQNALREVYA 59
Query: 667 -----DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH--VLRQKQLGKCFSEPAARFYVAE 719
H + +S + D+ + EYC GG L + ++ F E + + +
Sbjct: 60 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 119
Query: 720 VLLALEYLHMLGVIYRDLKPENILV 744
V L Y+H + +++ D+KP NI +
Sbjct: 120 VGRGLRYIHSMSLVHMDIKPSNIFI 144
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 8/165 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
N+ +K+G G GTV+ AE G++ I +M+ +F A R + E I++ L HP
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKI-LMEQDFHAER--VNEFLREVAIMKRLRHPN 95
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA-EVLLALEYLHM 729
+ T +V EY G L+ L K + + R +A +V + YLH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 730 LG--VIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSS 772
+++R+LK N+LV + + + DF LS R S T L S S
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS-RLKAS-TFLSSKS 198
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
S S GT E++APE+++ E D ++FG+ L+EL + P+ + +A V +
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255
Query: 900 LKFPDSPLISFQARDLIRGLLIKEPENR 927
+ ++ Q +I G EP R
Sbjct: 256 KRLEIPRNLNPQVAAIIEGCWTNEPWKR 283
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 27/171 (15%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNC--LFAIKVMDNEFLARRKKMPRAQTEREI 662
+G R+ +L + LGCG G V+ A + +C AIK + L + + A E +I
Sbjct: 8 DLGSRYMDL-KPLGCGGNGLVFSA--VDNDCDKRVAIKKI---VLTDPQSVKHALREIKI 61
Query: 663 LRMLDHPFLPTLY-------SQFTSD-------NLSCLVMEYCPGGDLHVLRQKQLGKCF 708
+R LDH + ++ SQ T D N +V EY +VL Q L
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPL---- 117
Query: 709 SEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVR-EDGHIMLTDFDLS 758
E AR ++ ++L L+Y+H V++RDLKP N+ + ED + + DF L+
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT--EREILRML-- 666
F+ L+K+G G+ G+V+ C++AIK R K P A + E+ LR +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK---------RSKKPLAGSVDEQNALREVYA 61
Query: 667 -----DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH--VLRQKQLGKCFSEPAARFYVAE 719
H + +S + D+ + EYC GG L + ++ F E + + +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 720 VLLALEYLHMLGVIYRDLKPENILV 744
V L Y+H + +++ D+KP NI +
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT--EREILRML-- 666
F+ L+K+G G+ G+V+ C++AIK R K P A + E+ LR +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIK---------RSKKPLAGSVDEQNALREVYA 61
Query: 667 -----DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH--VLRQKQLGKCFSEPAARFYVAE 719
H + +S + D+ + EYC GG L + ++ F E + + +
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 720 VLLALEYLHMLGVIYRDLKPENILV 744
V L Y+H + +++ D+KP NI +
Sbjct: 122 VGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLA--ELIGTNCLFAIKVMDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A +L G +D E + +P A E +L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTE----TEGVPSTAIREISLLK 57
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 58 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 222
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 283 A----HPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 608 LRHFNLLQKLGCGDIGTVYLA--ELIGTNCLFAIKVMDNEFLARRKKMP-RAQTEREILR 664
+ +F ++K+G G G VY A +L G +D E + +P A E +L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTE----TEGVPSTAIREISLLK 56
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L+HP + L ++N LV E+ DL P + Y+ ++L L
Sbjct: 57 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ H V++RDLKP+N+L+ +G I L DF L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 34/130 (26%)
Query: 844 VGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI+ G + + AVD W+ G E++ R F G + L + ++L
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGT 221
Query: 903 PDS----------------------------PLISFQARDLIRGLLIKEPENRLGSQKGA 934
PD P + R L+ +L +P R+ ++
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 935 AEIKQHPFFE 944
A HPFF+
Sbjct: 282 A----HPFFQ 287
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 142/351 (40%), Gaps = 80/351 (22%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMPR-AQTEREILR 664
++ + L+K+G G GTV+ A+ T+ + A+K +D++ + +P A E +L+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD----DEGVPSSALREICLLK 56
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKC---FSEPAARFYVAEVL 721
L H + L+ SD LV E+C DL +K C + ++ ++L
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDL----KKYFDSCNGDLDPEIVKSFLFQLL 111
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS------LRCSVSPTLLKSSSNMD 775
L + H V++RDLKP+N+L+ +G + L DF L+ +RC + + +
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLWYRP 169
Query: 776 PARVSGPCTESNCIQPF---CIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLV 832
P + G S I + CI F+ L A+ P D Q++ + +L+
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCI--------FAE--LANAARPLFPGNDVDDQLKRIFRLL 219
Query: 833 AEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
PT+ + S +Y P+ +L
Sbjct: 220 GTPTEEQWPSMTKLPDY-------------------------------KPYPMYPATTSL 248
Query: 893 ANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
NVV P ++ RDL++ LL P R+ A E QHP+F
Sbjct: 249 VNVV---------PKLNATGRDLLQNLLKCNPVQRI----SAEEALQHPYF 286
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF-LARRKKMPRAQTEREILRMLDHP 669
+ +++ +G G G V A T AIK + N F + K R E +IL+ H
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK--RTLRELKILKHFKHD 114
Query: 670 FL--------PTL-YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
+ PT+ Y +F S + +ME DLH + + + R+++ ++
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHS--SQPLTLEHVRYFLYQL 168
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
L L+Y+H VI+RDLKP N+LV E+ + + DF ++ SP
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 214
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 841 NSFVGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+V T Y APE++ + A+D W+ G E+L R F G L ++M
Sbjct: 221 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL-QLIMMV 279
Query: 900 LKFPDSPLISFQARDLIRGLL 920
L P +I + +R +
Sbjct: 280 LGTPSPAVIQAVGAERVRAYI 300
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 136/345 (39%), Gaps = 76/345 (22%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+ R +++L+++G G V+ L ++AIK ++ E A + + + E L
Sbjct: 52 SVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLN 109
Query: 665 MLDH--PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L + LY +D +VME C DL+ +K+ K + Y +L
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLE 166
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
A+ +H G+++ DLKP N L+ DG + L DF +
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI------------------------- 200
Query: 783 CTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNS 842
+N +QP + ++P P+ + + + +R N
Sbjct: 201 ---ANQMQPDTTSVVKDSQVGTVNYMP-------------------PEAIKDMSSSRENG 238
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM---QS 899
+ ++ W + G LY + YG+TPF+ N+ + + ++
Sbjct: 239 KSKSKISPKSDV-----------W-SLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 286
Query: 900 LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
++FPD P Q D+++ L ++P+ R+ E+ HP+ +
Sbjct: 287 IEFPDIPEKDLQ--DVLKCCLKRDPKQRI----SIPELLAHPYVQ 325
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL-RMLDHPFLPTLY 675
LG G G VY + AIK E R + + E L + L H +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIK----EIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 85
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCF-SEPAARFYVAEVLLALEYLHMLGVIY 734
F+ + + ME PGG L L + + G +E FY ++L L+YLH +++
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 735 RDLKPENILVRE-DGHIMLTDFDLSLRCS 762
RD+K +N+L+ G + ++DF S R +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLA 174
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 840 SNSFVGTHEYLAPEII-KG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
+ +F GT +Y+APEII KG G+G A D W+ G + E+ G+ PF G + V
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 239
Query: 898 QSLKFPDSPL-ISFQARDLIRGLLIKEPENR 927
P+ P +S +A+ I +P+ R
Sbjct: 240 MFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 136/345 (39%), Gaps = 76/345 (22%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+ R +++L+++G G V+ L ++AIK ++ E A + + + E L
Sbjct: 52 SVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLN 109
Query: 665 MLDH--PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L + LY +D +VME C DL+ +K+ K + Y +L
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLE 166
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
A+ +H G+++ DLKP N L+ DG + L DF +
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI------------------------- 200
Query: 783 CTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNS 842
+N +QP + ++P P+ + + + +R N
Sbjct: 201 ---ANQMQPDTTSVVKDSQVGAVNYMP-------------------PEAIKDMSSSRENG 238
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM---QS 899
+ ++ W + G LY + YG+TPF+ N+ + + ++
Sbjct: 239 KSKSKISPKSDV-----------W-SLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 286
Query: 900 LKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
++FPD P Q D+++ L ++P+ R+ E+ HP+ +
Sbjct: 287 IEFPDIPEKDLQ--DVLKCCLKRDPKQRI----SIPELLAHPYVQ 325
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 655 RAQTEREILRMLDHPFLPTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKCFS 709
R E +L+ L H + L FT D ++ G DL+ + + Q S
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQ---ALS 129
Query: 710 EPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ +F V ++L L+Y+H G+I+RDLKP N+ V ED + + DF L+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 823 AQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRT 881
+++R L +A D +V T Y APEI+ H VD W+ G + ELL G+
Sbjct: 168 SELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
Query: 882 PFKGSGNEETLANVV 896
F GS + L ++
Sbjct: 228 LFPGSDYIDQLKRIM 242
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 609 RHFNLLQKLGCGDIGTVYLAEL--IGTN--CLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH + +LG G+ G+V L +G N L A+K + + +++ Q E +IL+
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILK 66
Query: 665 MLDHPFLPTLYS-QFTSDNLSC-LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L F+ + S LVMEY P G L Q+ + Y +++
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICK 125
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL ++RDL NILV + H+ + DF L+
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Query: 601 LQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTER 660
L+Y S F + LG G G V A + +AIK + + +K+ +E
Sbjct: 2 LRYAS----DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEV 53
Query: 661 EILRMLDHPFLPTLYSQFTS-------------DNLSCLVMEYCPGGDLH-VLRQKQLGK 706
+L L+H ++ Y+ + + + MEYC G L+ ++ + L +
Sbjct: 54 MLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ 113
Query: 707 CFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
E F ++L AL Y+H G+I+RDLKP NI + E ++ + DF L+ S
Sbjct: 114 QRDEYWRLF--RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 767 LLKSSSNMDPA 777
+LK S P
Sbjct: 172 ILKLDSQNLPG 182
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 842 SFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFK-GSGNEETLANVVMQS 899
S +GT Y+A E++ G GH +D ++ GI +E++Y PF G L + S
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 900 LKFP---DSPLISFQARDLIRGLLIKEPENRLGSQ 931
++FP D + + + +IR L+ +P R G++
Sbjct: 246 IEFPPDFDDNKMKVEKK-IIRLLIDHDPNKRPGAR 279
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ +++ +G G G V A T AIK + N F R E +IL+ H
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVV-TNAKRTLRELKILKHFKHDN 114
Query: 671 L--------PTL-YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
+ PT+ Y +F S + +ME DLH + + + R+++ ++L
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHS--SQPLTLEHVRYFLYQLL 168
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
L+Y+H VI+RDLKP N+LV E+ + + DF ++ SP
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPA 213
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Query: 841 NSFVGTHEYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQS 899
+V T Y APE++ + A+D W+ G E+L R F G L ++M
Sbjct: 220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQL-QLIMMV 278
Query: 900 LKFPDSPLISFQARDLIRGLL 920
L P +I + +R +
Sbjct: 279 LGTPSPAVIQAVGAERVRAYI 299
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 609 RHFNLLQKLGCGDIGTVYLAEL--IGTN--CLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH + +LG G+ G+V L +G N L A+K + + +++ Q E +IL+
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILK 67
Query: 665 MLDHPFLPTLYS-QFTSDNLSC-LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L F+ + S LVMEY P G L Q+ + Y +++
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICK 126
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL ++RDL NILV + H+ + DF L+
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 609 RHFNLLQKLGCGDIGTVYLAEL--IGTN--CLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH + +LG G+ G+V L +G N L A+K + + +++ Q E +IL+
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILK 79
Query: 665 MLDHPFLPTLYS-QFTSDNLSC-LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L F+ + S LVMEY P G L Q+ + Y +++
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICK 138
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL ++RDL NILV + H+ + DF L+
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL-RMLDHPFLPTLY 675
LG G G VY + AIK E R + + E L + L H +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIK----EIPERDSRYSQPLHEEIALHKHLKHKNIVQYL 71
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCF-SEPAARFYVAEVLLALEYLHMLGVIY 734
F+ + + ME PGG L L + + G +E FY ++L L+YLH +++
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 735 RDLKPENILVRE-DGHIMLTDFDLSLRCS 762
RD+K +N+L+ G + ++DF S R +
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLA 160
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 840 SNSFVGTHEYLAPEII-KG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVM 897
+ +F GT +Y+APEII KG G+G A D W+ G + E+ G+ PF G + V
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 225
Query: 898 QSLKFPDSPL-ISFQARDLIRGLLIKEPENR 927
P+ P +S +A+ I +P+ R
Sbjct: 226 MFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 660 REILRMLDHPFLPTLY-----SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAAR 714
R+ L + HP + ++ + D + +VMEY G L ++ G+ A
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL----KRSKGQKLPVAEAI 185
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVRED 747
Y+ E+L AL YLH +G++Y DLKPENI++ E+
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPR-AQTEREILRMLDHP 669
F L+KLG G TVY T A+K + L + P A E +++ L H
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK---LDSEEGTPSTAIREISLMKELKHE 63
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG---KCFSEPAARFYVAEVLLALEY 726
+ LY ++N LV E+ + + +G + +++ ++L L +
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H +++RDLKP+N+L+ + G + L DF L+
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 733 IYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPF 792
+ ++LK ENI+ D ++ T+ L+L LK + + E N ++ F
Sbjct: 56 LMKELKHENIVRLYD--VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 793 CIEPTCQVP-CFSPRFLPATAKTRKPKADPAAQIR----SLPQLVAEPTDARSNSFVGTH 847
+ + C + L K + + Q++ L + P + S+ V T
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TL 172
Query: 848 EYLAPEIIKG-EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
Y AP+++ G + ++D W+ G L E++ G+ F G+ +EE L
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 218
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+H+ +QKLG G V L E + +A+K + ++ AQ E ++ R+ +H
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQQDREEAQREADMHRLFNH 85
Query: 669 PFLPTLYS----QFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLL 722
P + L + + + + + L++ + G L + R K G +E + + +
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDF 755
LE +H G +RDLKP NIL+ ++G +L D
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
Query: 846 THEYLAPEIIKGEGH---GAAVDWWTFGIFLYELLYGRTPFKGSGNE-ETLANVVMQSLK 901
T Y APE+ + H D W+ G LY +++G P+ + +++A V L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 902 FPDSPLISFQARDLIRGLLIKEPENR 927
P SP S L+ ++ +P R
Sbjct: 266 IPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+L+
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L + LG G + V+LA + + A+KV+ + R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 671 LPTLYSQFTSDN----LSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+ +Y+ ++ L +VMEY G L + + G + A +A+ AL +
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALNF 131
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H G+I+RD+KP NI++ + + DF ++
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
++ + +GT +YL+PE +G+ A D ++ G LYE+L G PF G ++ +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 230
Query: 899 SLK---FPDSPLISFQARDL---IRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIR 952
++ P S + DL + L K PENR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 953 CAIPPELP 960
PPE P
Sbjct: 281 NGEPPEAP 288
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 655 RAQTEREILRMLDHPFLPTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC-- 707
R E +L+ L H + L FT D ++ G DL+ + KC
Sbjct: 65 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLN-----NIVKCQA 119
Query: 708 FSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
S+ +F V ++L L+Y+H G+I+RDLKP N+ V ED + + DF L+
Sbjct: 120 LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 824 QIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTP 882
++R L +A D +V T Y APEI+ H VD W+ G + ELL G+
Sbjct: 161 ELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
Query: 883 FKGSGNEETLANVV 896
F GS + L ++
Sbjct: 221 FPGSDYIDQLKRIM 234
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 118/341 (34%), Gaps = 95/341 (27%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K + + ARR+ RA I+R++D
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVD----- 122
Query: 673 TLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLG 731
+Y + L++ C GG+L Q + + F+E A + A++YLH +
Sbjct: 123 -VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSIN 181
Query: 732 VIYRDLKPENILV---REDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNC 788
+ +RD+KPEN+L R + + LTDF + + +L
Sbjct: 182 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL--------------------- 220
Query: 789 IQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHE 848
PC++P ++ E
Sbjct: 221 ----------TTPCYTPYYVAP-------------------------------------E 233
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKG------SGNEETLANVVMQSLKF 902
L PE + + D W+ G+ Y LL G PF S +T
Sbjct: 234 VLGPE-----KYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPN 288
Query: 903 PDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
P+ +S + + LIR LL EP R E HP+
Sbjct: 289 PEWSEVSEEVKXLIRNLLKTEPTQR----XTITEFXNHPWI 325
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKV--MDNEFLARRKKMPR-AQTEREILR 664
++ + L+K+G G GTV+ A+ T+ + A+K +D++ + +P A E +L+
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD----DEGVPSSALREICLLK 56
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKC---FSEPAARFYVAEVL 721
L H + L+ SD LV E+C DL +K C + ++ ++L
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDL----KKYFDSCNGDLDPEIVKSFLFQLL 111
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L + H V++RDLKP+N+L+ +G + L +F L+
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L + LG G + V+LA + + A+KV+ + R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 671 LPTLYSQFTSDN----LSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+ +Y ++ L +VMEY G L + + G + A +A+ AL +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALNF 131
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H G+I+RD+KP NI++ + + DF ++
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
++ + +GT +YL+PE +G+ A D ++ G LYE+L G PF G ++ +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 230
Query: 899 SLK---FPDSPLISFQARDL---IRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIR 952
++ P S + DL + L K PENR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 953 CAIPPELP 960
PPE P
Sbjct: 281 NGEPPEAP 288
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L + LG G + V+LA + + A+KV+ + R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 671 LPTLYSQFTSDN----LSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+ +Y ++ L +VMEY G L + + G + A +A+ AL +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALNF 131
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H G+I+RD+KP NI++ + + DF ++
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
++ + +GT +YL+PE +G+ A D ++ G LYE+L G PF G + +++A ++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD-SPDSVAYQHVR 233
Query: 899 SLKFPDSPLISFQARDL---IRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIRCAI 955
P S + DL + L K PENR + AAE++ + +
Sbjct: 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVHNGE 283
Query: 956 PPELP 960
PPE P
Sbjct: 284 PPEAP 288
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 6/152 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L + LG G + V+LA + + A+KV+ + R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 671 LPTLYSQFTSDN----LSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+ +Y ++ L +VMEY G L + + G + A +A+ AL +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-GPMTPKRAIEV-IADACQALNF 131
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H G+I+RD+KP NI++ + + DF ++
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
++ + +GT +YL+PE +G+ A D ++ G LYE+L G PF G ++ +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 230
Query: 899 SLK---FPDSPLISFQARDL---IRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIR 952
++ P S + DL + L K PENR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 953 CAIPPELP 960
PPE P
Sbjct: 281 NGEPPEAP 288
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 109 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 611 FNLLQKLGCG--DIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ LL +G G D+ TV LA T ++ ++ E + + Q E + ++ +H
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLE-ACSNEMVTFLQGELHVSKLFNH 69
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + F +DN +V + G L +E A + + VL AL+Y+H
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 729 MLGVIYRDLKPENILVREDGHIMLT 753
+G ++R +K +IL+ DG + L+
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLS 154
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 609 RHFNLLQKLGCGDIGTVYLAEL--IGTN--CLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH + +LG G+ G+V L +G N L A+K + + +++ Q E +IL+
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF---QREIQILK 63
Query: 665 MLDHPFLPTL--YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L F+ S LVMEY P G L Q+ + Y +++
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR-LDASRLLLYSSQICK 122
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL ++RDL NILV + H+ + DF L+
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 115 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 745 -REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 170 DHEHRKLRLIDWGLA 184
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 328
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + + GK P A++ + Y+ + ++R
Sbjct: 329 AVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 387
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 388 DLRAANILVGENLVCKVADFGLA 410
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ KE
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 924 PENR 927
PE R
Sbjct: 505 PEER 508
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 611 FNLLQKLGCG--DIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ LL +G G D+ TV LA T ++ ++ E + + Q E + ++ +H
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLE-ACSNEMVTFLQGELHVSKLFNH 85
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
P + + F +DN +V + G L +E A + + VL AL+Y+H
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 729 MLGVIYRDLKPENILVREDGHIMLT 753
+G ++R +K +IL+ DG + L+
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLS 170
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 17 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 73
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 74 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 130
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 69
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 70 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 126
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 15 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 71
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + + Y +++
Sbjct: 72 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQI 128
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 97
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + + Y +++
Sbjct: 98 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQI 154
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 89
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 144
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 199
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 248
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 823 AQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRT 881
++++ L +A TD +V T Y APEI+ H VD W+ G + ELL GRT
Sbjct: 168 SELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 882 PFKGSGNEETLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
F G+ + + L ++++ + P + L+ S AR+ I+ L
Sbjct: 228 LFPGTDHIDQL-KLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 85
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 140
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 195
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 244
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 823 AQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRT 881
++++ L +A TD +V T Y APEI+ H VD W+ G + ELL GRT
Sbjct: 164 SELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 882 PFKGSGNEETLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
F G+ + + L ++++ + P + L+ S AR+ I+ L
Sbjct: 224 LFPGTDHIDQL-KLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 66
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 67 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 123
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 84
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 85 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 141
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 20/229 (8%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
L FT + ++ + G DL+ + + Q ++ +F + ++L L+Y
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILRGLKY 140
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTES 786
+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 787 NCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 94
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 149
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 204
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 253
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 242 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 16 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 72
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 73 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 129
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 130 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 66
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 67 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 123
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 84
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 85 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 141
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 32 LSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 88
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 143
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 198
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 247
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 236 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 66
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 67 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 123
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 64
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 65 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 121
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 9 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 65
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 66 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 122
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI-LRMLDHPFLP 672
L ++G G G V+ T + A+K M +++ R + ++ L+ D P++
Sbjct: 30 LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS--GNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL-HMLG 731
+ F ++ + ME G L+++ G + VA ++ AL YL G
Sbjct: 88 QCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVA-IVKALYYLKEKHG 145
Query: 732 VIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKS---SSNMDPARVSGP 782
VI+RD+KP NIL+ E G I L DF +S R +S ++ M P R+ P
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPP 199
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 14 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 70
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + Y +++
Sbjct: 71 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQI 127
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 88
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 143
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 198
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 247
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 236 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV EY D KQL + ++ RFY+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 111 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
Query: 745 -REDGHIMLTDFDLS 758
+ + L D+ L+
Sbjct: 166 DHQQKKLRLIDWGLA 180
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 93/229 (40%), Gaps = 20/229 (8%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
L FT + ++ + G DL+ + + Q ++ +F + ++L L+Y
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQ---KLTDDHVQFLIYQILRGLKY 140
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTES 786
+H +I+RDLKP N+ V ED + + DF L C + + R P
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDSELKILDFGL---CRHTDDEMTGYVATRWYR--APEIML 195
Query: 787 NCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLAN 894
TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + + L
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL-K 233
Query: 895 VVMQSLKFPDSPLI----SFQARDLIRGL 919
++++ + P + L+ S AR+ I+ L
Sbjct: 234 LILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 90
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 145
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ + T ++ P
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEI 200
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 249
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A T +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 238 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 102
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 157
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 212
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 261
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 250 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
L P + LY + ME GG L L KQ+G C E A +Y+ + L LE
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL-IKQMG-CLPEDRALYYLGQALEGLE 164
Query: 726 YLHMLGVIYRDLKPENILVREDG-HIMLTDFDLSL 759
YLH +++ D+K +N+L+ DG L DF +L
Sbjct: 165 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 199
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKGEGHG-----------AAVDWWTFGIFLYELLY 878
Q+ + T +S VGT Y+ PE IK D W+ G LY + Y
Sbjct: 175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 879 GRTPFKGSGNEETLANVVM---QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAA 935
G+TPF+ N+ + + ++ ++FPD P Q D+++ L ++P+ R+
Sbjct: 235 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRI----SIP 288
Query: 936 EIKQHPFFE 944
E+ HP+ +
Sbjct: 289 ELLAHPYVQ 297
Score = 38.5 bits (88), Expect = 0.016, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 601 LQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTER 660
Q S+ R +++L+++G G V+ L ++AIK ++ E A + + + E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLE-EADNQTLDSYRNEI 77
Query: 661 EILRMLDHPF--LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
L L + LY +D +VME C DL+ +K+ K + Y
Sbjct: 78 AYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWK 134
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+L A+ +H G+++ DLKP N L+ DG + L DF ++
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR---ELRLLKHMKHENV 95
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 150
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 205
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 254
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 243 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+Q++G G G V+L + + + AIK + ++ + A E++ L HP
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPK 63
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L LY CLV E+ G L + Q G F+ +V + YL
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA 122
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
VI+RDL N LV E+ I ++DF ++ R + S+ P + + P
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASP 173
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ +PE+ + + D W+FG+ ++E+ G+ P++ N E + ++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 601 LQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTER 660
L+Y S F + LG G G V A + +AIK + + +K+ +E
Sbjct: 2 LRYAS----DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEV 53
Query: 661 EILRMLDHPFLPTLYSQFTS-------------DNLSCLVMEYCPGGDLH-VLRQKQLGK 706
+L L+H ++ Y+ + + + MEYC L+ ++ + L +
Sbjct: 54 MLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ 113
Query: 707 CFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
E F ++L AL Y+H G+I+RDLKP NI + E ++ + DF L+ S
Sbjct: 114 QRDEYWRLF--RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 767 LLKSSSNMDPA 777
+LK S P
Sbjct: 172 ILKLDSQNLPG 182
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 842 SFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFK-GSGNEETLANVVMQS 899
S +GT Y+A E++ G GH +D ++ GI +E++Y PF G L + S
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 900 LKFP---DSPLISFQARDLIRGLLIKEPENRLGSQ 931
++FP D + + + +IR L+ +P R G++
Sbjct: 246 IEFPPDFDDNKMKVEKK-IIRLLIDHDPNKRPGAR 279
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKG-----------EGHGAAVDWWTFGIFLYELLY 878
Q+ + T +S VGT Y+ PE IK D W+ G LY + Y
Sbjct: 203 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262
Query: 879 GRTPFKGSGNEETLANVVM---QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAA 935
G+TPF+ N+ + + ++ ++FPD P Q D+++ L ++P+ R+
Sbjct: 263 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRI----SIP 316
Query: 936 EIKQHPFFE 944
E+ HP+ +
Sbjct: 317 ELLAHPYVQ 325
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+ R +++L+++G G V+ L ++AIK ++ E A + + + E L
Sbjct: 52 SVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLN 109
Query: 665 MLDH--PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L + LY +D +VME C DL+ +K+ K + Y +L
Sbjct: 110 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLE 166
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A+ +H G+++ DLKP N L+ DG + L DF ++
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 103
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 158
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 213
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 262
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 251 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 685 CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
LV EY D KQL + ++ RFY+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 116 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
Query: 745 -REDGHIMLTDFDLS 758
+ + L D+ L+
Sbjct: 171 DHQQKKLRLIDWGLA 185
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 90
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 145
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ + T ++ P
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEI 200
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 249
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A T +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 238 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 95
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 150
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 205
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 254
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 243 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 89
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL + KC ++ +F + ++L L
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 199
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 248
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 237 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 79
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V+EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 80 AVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 924 PENR 927
PE R
Sbjct: 256 PEER 259
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 39 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 95
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 150
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 151 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 205
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 206 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 254
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 243 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 274
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 85
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 140
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 195
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 244
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 233 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 109 LVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 163
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 164 HEHRKLRLIDWGLA 177
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
LV E+ D KQL + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 LVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID 164
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 165 HEHRKLRLIDWGLA 178
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKGEGHG-----------AAVDWWTFGIFLYELLY 878
Q+ + T +S VGT Y+ PE IK D W+ G LY + Y
Sbjct: 159 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 218
Query: 879 GRTPFKGSGNEETLANVVM---QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAA 935
G+TPF+ N+ + + ++ ++FPD P Q D+++ L ++P+ R+
Sbjct: 219 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRI----SIP 272
Query: 936 EIKQHPFFE 944
E+ HP+ +
Sbjct: 273 ELLAHPYVQ 281
Score = 38.1 bits (87), Expect = 0.026, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+ R +++L+++G G V+ L ++AIK ++ E A + + + E L
Sbjct: 8 SVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLN 65
Query: 665 MLDHPF--LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L + LY +D +VME C DL+ +K+ K + Y +L
Sbjct: 66 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLE 122
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A+ +H G+++ DLKP N L+ DG + L DF ++
Sbjct: 123 AVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA 157
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 38 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 94
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 149
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 204
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 205 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 253
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 242 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 273
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 90
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 145
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ + T ++ P
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEI 200
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 249
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A T +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 238 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 125
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 126 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 180
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 181 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 288
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 289 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 325
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 95
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 96 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 150
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 151 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 258
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 259 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 295
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 85
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 140
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 195
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 244
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 233 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 79
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V+EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 80 AVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 924 PENR 927
PE R
Sbjct: 256 PEER 259
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 93/229 (40%), Gaps = 20/229 (8%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
L FT + ++ + G DL+ + + Q ++ +F + ++L L+Y
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILRGLKY 140
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTES 786
+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 141 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIML 195
Query: 787 NCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGNMSPEAFLQEAQ----VMKKLRHEKLVQLY 246
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 247 AVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 305
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L
Sbjct: 306 DLRAANILVGENLVCKVADFGLG 328
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 924 PENR 927
PE R
Sbjct: 423 PEER 426
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 106
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 107 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 161
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 216
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 265
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 254 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
L P + LY + ME GG L L KQ+G C E A +Y+ + L LE
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL-IKQMG-CLPEDRALYYLGQALEGLE 180
Query: 726 YLHMLGVIYRDLKPENILVREDG-HIMLTDFDLSL 759
YLH +++ D+K +N+L+ DG L DF +L
Sbjct: 181 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 215
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 89
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 144
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 199
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 248
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 237 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
L P + LY + ME GG L L KQ+G C E A +Y+ + L LE
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL-IKQMG-CLPEDRALYYLGQALEGLE 178
Query: 726 YLHMLGVIYRDLKPENILVREDG-HIMLTDFDLSL 759
YLH +++ D+K +N+L+ DG L DF +L
Sbjct: 179 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 213
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 88
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 143
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 198
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 247
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 236 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 26 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 82
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 83 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 137
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 138 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 192
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 193 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 241
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 229
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 230 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 261
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 87
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 88 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 142
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 143 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 250
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 251 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 287
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 90
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 145
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 146 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 200
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 249
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 238 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 269
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI--LRM 665
+ ++ L+K+G G G VY A+ FA+K + L + + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKC---FSEPAARFYVAEVLL 722
L H + LY + LV E+ DL +K L C A+ ++ ++L
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL----KKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ Y H V++RDLKP+N+L+ +G + + DF L+
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 25 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 81
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 82 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 136
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 137 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 191
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 192 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 240
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 228
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 229 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 260
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI--LRM 665
+ ++ L+K+G G G VY A+ FA+K + L + + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKC---FSEPAARFYVAEVLL 722
L H + LY + LV E+ DL +K L C A+ ++ ++L
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL----KKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ Y H V++RDLKP+N+L+ +G + + DF L+
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 76/156 (48%), Gaps = 14/156 (8%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI--LRM 665
+ ++ L+K+G G G VY A+ FA+K + L + + + T REI L+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIR---LEKEDEGIPSTTIREISILKE 56
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKC---FSEPAARFYVAEVLL 722
L H + LY + LV E+ DL +K L C A+ ++ ++L
Sbjct: 57 LKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DL----KKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ Y H V++RDLKP+N+L+ +G + + DF L+
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 842 SFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
S G + ++APE+I+ D W++G+ L+ELL G PF+G V M L
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232
Query: 902 FP 903
P
Sbjct: 233 LP 234
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD-NEFLARRKKMPRAQTEREILR 664
I L + +G G G VY A IG D +E ++ + + + E ++
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDIS--QTIENVRQEAKLFA 61
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
ML HP + L + CLVME+ GG L+ + GK + ++ +
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGM 118
Query: 725 EYLH---MLGVIYRDLKPENILVR---EDGH-----IMLTDFDLS 758
YLH ++ +I+RDLK NIL+ E+G + +TDF L+
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 29 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 85
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 140
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 141 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 195
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 196 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 244
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 233 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 264
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNAMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 608 LRHFNLLQKLGCGDIGTVYLA--ELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
L+ + L+ +G G G V A ++G N A+K + F + RA E +L+
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINV--AVKKLSRPF-QNQTHAKRAYRELVLLKC 77
Query: 666 LDHPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
++H + +L + FT LVME V+ + + + +
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQ 132
Query: 720 VLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+L +++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 171
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 60/148 (40%), Gaps = 44/148 (29%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
T+ +V T Y APE+I G G+ VD W+ G + EL+ G F+G+ + + V
Sbjct: 176 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 235
Query: 896 VMQ----SLKF---------------PDSPLISF---------------------QARDL 915
+ Q S +F P P I+F QARDL
Sbjct: 236 IEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDL 295
Query: 916 IRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+ +L+ +P+ R+ E +HP+
Sbjct: 296 LSKMLVIDPDKRI----SVDEALRHPYI 319
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 85
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 86 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 140
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 141 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 248
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 249 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 285
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 33 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 89
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL + KC ++ +F + ++L L
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGL 144
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 145 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 199
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 248
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 237 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 81
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 82 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 137 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 281
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 46 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 102
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 157
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 158 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 212
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 213 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 261
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 250 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 281
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 79
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 80 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 134
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 135 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 279
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 86
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 87 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 141
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 142 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 249
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 250 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 286
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 88
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 143
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 144 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 198
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 199 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 247
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 236 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 267
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T + P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-----GXVATRWYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 608 LRHFNLLQKLGCGDIGTVYLA--ELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
L+ + L+ +G G G V A ++G N A+K + F + RA E +L+
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINV--AVKKLSRPF-QNQTHAKRAYRELVLLKC 79
Query: 666 LDHPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
++H + +L + FT LVME V+ + + + +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQ 134
Query: 720 VLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+L +++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 44/148 (29%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
T+ +V T Y APE+I G G+ A VD W+ G + EL+ G F+G+ + + V
Sbjct: 178 TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKV 237
Query: 896 VMQ----SLKF---------------PDSPLISF---------------------QARDL 915
+ Q S +F P P I F QARDL
Sbjct: 238 IEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDL 297
Query: 916 IRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+ +L+ +P+ R+ E +HP+
Sbjct: 298 LSKMLVIDPDKRI----SVDEALRHPYI 321
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKG-----------EGHGAAVDWWTFGIFLYELLY 878
Q+ + T +S VGT Y+ PE IK D W+ G LY + Y
Sbjct: 156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 215
Query: 879 GRTPFKGSGNEETLANVVM---QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAA 935
G+TPF+ N+ + + ++ ++FPD P Q D+++ L ++P+ R+
Sbjct: 216 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRI----SIP 269
Query: 936 EIKQHPFFE 944
E+ HP+ +
Sbjct: 270 ELLAHPYVQ 278
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+ R +++L+++G G V+ L ++AIK ++ E A + + + E L
Sbjct: 5 SVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLN 62
Query: 665 MLDH--PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L + LY +D +VME C DL+ +K+ K + Y +L
Sbjct: 63 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLE 119
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A+ +H G+++ DLKP N L+ DG + L DF ++
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 154
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 103
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 158
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 213
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 262
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 251 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 81
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 82 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 137 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 10/114 (8%)
Query: 836 TDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET---- 891
T R N+ + ++ + GE + + D W+ G+ +Y LL G PF +
Sbjct: 151 TSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 210
Query: 892 LANVVMQSLKFPDSPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+ M +FP+ +S + + LIR LL EP R+ E HP+
Sbjct: 211 KTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 260
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 80
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 135
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 190
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 239
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 228 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 80
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 81 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 135
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 136 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 243
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 244 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 280
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 81
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 82 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 137 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 245 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 281
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+Q++G G G V+L + + + AIK + ++ + A E++ L HP
Sbjct: 12 LTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPK 66
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L LY CLV E+ G L + Q G F+ +V + YL
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA 125
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
VI+RDL N LV E+ I ++DF ++ R + S+ P + + P
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASP 176
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ +PE+ + + D W+FG+ ++E+ G+ P++ N E + ++
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 79
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +VMEY G L + ++GK P A++ + Y+ + ++R
Sbjct: 80 AVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
Score = 37.0 bits (84), Expect = 0.054, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 924 PENR 927
PE R
Sbjct: 256 PEER 259
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKG-----------EGHGAAVDWWTFGIFLYELLY 878
Q+ + T +S VGT Y+ PE IK D W+ G LY + Y
Sbjct: 155 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 214
Query: 879 GRTPFKGSGNEETLANVVM---QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAA 935
G+TPF+ N+ + + ++ ++FPD P Q D+++ L ++P+ R+
Sbjct: 215 GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRI----SIP 268
Query: 936 EIKQHPFFE 944
E+ HP+ +
Sbjct: 269 ELLAHPYVQ 277
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+ R +++L+++G G V+ L ++AIK ++ E A + + + E L
Sbjct: 4 SVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLN 61
Query: 665 MLDH--PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L + LY +D +VME C DL+ +K+ K + Y +L
Sbjct: 62 KLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLE 118
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A+ +H G+++ DLKP N L+ DG + L DF ++
Sbjct: 119 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 153
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKK--MPRAQTEREILRMLDHPFLP 672
Q LG G G V T FA+K++ + ARR+ RA I+R++D
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVD--VYE 79
Query: 673 TLYSQFTSDNLSCL--VMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
LY+ CL VME GG+L Q + + F+E A + + A++YLH +
Sbjct: 80 NLYA-----GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 134
Query: 731 GVIYRDLKPENILV---REDGHIMLTDFDLS 758
+ +RD+KPEN+L R + + LTDF +
Sbjct: 135 NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEET----LANVVMQSLKFPD 904
Y+APE++ E + + D W+ G+ +Y LL G PF + + M +FP+
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 905 SPL--ISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFF 943
+S + + LIR LL EP R+ E HP+
Sbjct: 243 PEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPWI 279
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 79
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 134
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 189
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 238
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 227 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+Q++G G G V+L + + + AIK + ++ + A E++ L HP
Sbjct: 9 LTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPK 63
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L LY CLV E+ G L + Q G F+ +V + YL
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA 122
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
VI+RDL N LV E+ I ++DF ++ R + S+ P + + P
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASP 173
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ +PE+ + + D W+FG+ ++E+ G+ P++ N E + ++
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFL-----ARRKKMPRAQTEREIL 663
+ ++ + LG G G V+ A N +K + E + K+ + E IL
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 664 RMLDHPFLPTLYSQFTSDNLSCLVME-YCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
++H + + F + LVME + G DL + EP A + +++
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVS 141
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDF 755
A+ YL + +I+RD+K ENI++ ED I L DF
Sbjct: 142 AVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 842 SFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSL 900
+F GT EY APE++ G + G ++ W+ G+ LY L++ PF EET+ +
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF--CELEETVEAAIHPPY 245
Query: 901 KFPDSPLISFQARDLIRGLLIKEPENRLGSQK 932
L+S + L+ GLL PE R +K
Sbjct: 246 ------LVSKELMSLVSGLLQPVPERRTTLEK 271
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 598 HVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQ 657
+V++ + + R + +L+ +G G G V A + A+K++ NE K+ R
Sbjct: 87 YVQVPHDHVAYR-YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQA 140
Query: 658 TEREILRMLDHPF---------LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCF 708
E +R+L+H + + FT N C+ E +L+ L +K + F
Sbjct: 141 AEE--IRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGF 197
Query: 709 SEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGH--IMLTDF 755
S P R + +L L+ LH +I+ DLKPENIL+++ G I + DF
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R + + + Y APE+I G +G +D W+ G L ELL G G + LA +++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA-CMIE 313
Query: 899 SLKFPDSPLISFQAR 913
L P L+ R
Sbjct: 314 LLGMPSQKLLDASKR 328
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 80
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 135
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 136 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 190
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 191 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 239
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 228 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 259
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 245
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + + GK P A++ + Y+ + ++R
Sbjct: 246 AVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 305 DLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 924 PENR 927
PE R
Sbjct: 422 PEER 425
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 656 AQTEREILRMLDHPFLPTLYSQFTS--DNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPA- 712
A E +LR L HP + +L F S D L+ +Y H+++ + K +P
Sbjct: 65 ACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQ 124
Query: 713 -----ARFYVAEVLLALEYLHMLGVIYRDLKPENILVR----EDGHIMLTDFDLSLRCSV 763
+ + ++L + YLH V++RDLKP NILV E G + + D + R
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA-RLFN 183
Query: 764 SPTLLKSSSNMDPARVS 780
SP LK +++DP V+
Sbjct: 184 SP--LKPLADLDPVVVT 198
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 79
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 80 AVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 924 PENR 927
PE R
Sbjct: 256 PEER 259
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+Q++G G G V+L + + + AIK + ++ + A E++ L HP
Sbjct: 7 LTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPK 61
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L LY CLV E+ G L + Q G F+ +V + YL
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA 120
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
VI+RDL N LV E+ I ++DF ++ R + S+ P + + P
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASP 171
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ +PE+ + + D W+FG+ ++E+ G+ P++ N E + ++
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 17/157 (10%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDH 668
+ L +G G G+V + + + A+K + F + K+ R E +L+ + H
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKH 109
Query: 669 PFLPTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVL 721
+ L FT + ++ + G DL+ + KC ++ +F + ++L
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQIL 164
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L+Y+H +I+RDLKP N+ V ED + + DF L+
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ +
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L +M+ P + +I S +AR+ I L
Sbjct: 260 QLQQ-IMRLTGTPPASVISRMPSHEARNYINSL 291
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 672 PTLYSQFTSDNLSCLVMEY-CPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 134
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 182
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 225
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 226 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 264
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 37 LAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 93
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 94 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 148
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 149 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 203
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 204 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 252
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 240
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 241 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 272
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 245
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + + GK P A++ + Y+ + ++R
Sbjct: 246 AVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 305 DLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 924 PENR 927
PE R
Sbjct: 422 PEER 425
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 11 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 67
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L QK + + Y +++
Sbjct: 68 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQI 124
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+R+L NILV + + + DF L+
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH LQ+LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 69
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+MEY P G L Q + Y +++
Sbjct: 70 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEYLPYGSLRDYLQAHAER-IDHIKLLQYTSQI 126
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 598 HVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQ 657
+V++ + + R + +L+ +G G G V A + A+K++ NE K+ R
Sbjct: 87 YVQVPHDHVAYR-YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQA 140
Query: 658 TEREILRMLDHPF---------LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCF 708
E +R+L+H + + FT N C+ E +L+ L +K + F
Sbjct: 141 AEE--IRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGF 197
Query: 709 SEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGH--IMLTDF 755
S P R + +L L+ LH +I+ DLKPENIL+++ G I + DF
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPLI 908
Y APE+I G +G +D W+ G L ELL G G + LA +++ L P L+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA-CMIELLGMPXQKLL 323
Query: 909 SFQAR 913
R
Sbjct: 324 DASKR 328
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 162
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 210
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQ 253
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 254 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 292
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 79
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 80 AVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 924 PENR 927
PE R
Sbjct: 256 PEER 259
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 628 AELIGTNCLF-AIKVMDNEF--LARRKKMPR--AQTER------EILRMLDHPFLPTLYS 676
E++G C AIKV E + K++ R +T+R +++R L+HP +
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 677 QFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
D + EY GG L +++ +S+ + + ++ + YLH + +I+R
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVS--FAKDIASGMAYLHSMNIIHR 132
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL N LVRE+ ++++ DF L+
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLA 155
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRT 881
+ +P + + VG ++APE+I G + VD ++FGI L E++ GR
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRV 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 79
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 134
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 189
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 238
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 227 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 50 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 106
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 107 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 161
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T + + P
Sbjct: 162 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGYVATRWYRAPEI 216
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 217 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 265
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 254 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 285
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 149
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 197
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 240
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 241 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 279
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 168
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 216
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 202 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 259
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 260 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 298
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 148
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 196
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 239
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 240 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 278
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 119
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 174
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 343 DPAKRISVDDAL----QHPYI 359
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 23/171 (13%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE ++ I ++H KLG G G VY+ + A+K + + + +
Sbjct: 26 KWE------MERTDITMKH-----KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE 74
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + +V EY P G+L L +C E
Sbjct: 75 FLKEAAVMKEI----KHPNLVQLLGVCTLEPPFYIVTEYMPYGNL----LDYLRECNREE 126
Query: 712 AAR----FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ A+EYL I+RDL N LV E+ + + DF LS
Sbjct: 127 VTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLS 177
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 149
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 197
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 240
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 241 VFFRQR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 279
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+Q++G G G V+L + + + AIK + ++ + A E++ L HP
Sbjct: 10 LTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIEEA----EVMMKLSHPK 64
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L LY CLV E+ G L + Q G F+ +V + YL
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA 123
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
VI+RDL N LV E+ I ++DF ++ R + S+ P + + P
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASP 174
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ +PE+ + + D W+FG+ ++E+ G+ P++ N E + ++
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 162
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 210
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQ 253
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 254 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 292
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 148
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 196
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 239
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 240 VFFRQR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 278
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 672 PTLYSQFTSDNLSCLVMEY-CPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 176
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 224
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 267
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 268 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 306
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 79
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCAKLTDDHVQFLIYQILRGL 134
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEI 189
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 238
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 227 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 7/172 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+Q++G G G V+L + + + AIK + ++ + A E++ L HP
Sbjct: 29 LTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIKEGSMSEDDFIEEA----EVMMKLSHPK 83
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L LY CLV E+ G L + Q G F+ +V + YL
Sbjct: 84 LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEA 142
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
VI+RDL N LV E+ I ++DF ++ R + S+ P + + P
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVKWASP 193
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/49 (22%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ +PE+ + + D W+FG+ ++E+ G+ P++ N E + ++
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 149
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 197
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 240
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 241 VFFRQR------VSXECQHLIRWCLALRPXDR----PTFEEIQNHPWMQ 279
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 161
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 209
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQ 252
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 253 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 291
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 162
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 210
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQ 253
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 254 VFFRQR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 292
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 672 PTLYSQFTSDNLSCLVMEY-CPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 134
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 182
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 225
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 226 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 264
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 181
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 229
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 215 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 272
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 273 VFFRQR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 311
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 245
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + + GK P A++ + Y+ + ++R
Sbjct: 246 AVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 305 DLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 924 PENR 927
PE R
Sbjct: 422 PEER 425
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 20/169 (11%)
Query: 598 HVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQ 657
+V++ + + R + +L+ +G G G V A + A+K++ NE K+ R
Sbjct: 87 YVQVPHDHVAYR-YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQA 140
Query: 658 TEREILRMLDHPF---------LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCF 708
E +R+L+H + + FT N C+ E +L+ L +K + F
Sbjct: 141 AEE--IRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGF 197
Query: 709 SEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGH--IMLTDF 755
S P R + +L L+ LH +I+ DLKPENIL+++ G I + DF
Sbjct: 198 SLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
R + + + Y APE+I G +G +D W+ G L ELL G G + LA +++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLA-CMIE 313
Query: 899 SLKFPDSPLISFQAR 913
L P L+ R
Sbjct: 314 LLGMPSQKLLDASKR 328
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 161
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 209
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 252
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 253 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 291
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 162
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 210
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQ 253
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 254 VFFRQR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 292
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 161
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 209
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQ 252
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 253 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 291
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
L+++LG G G V++ G N AIK + ++ + AQ I++ L H
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWNG-NTKVAIKTLKPGTMSPESFLEEAQ----IMKKLKHDK 65
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L LY+ + + + +V EY G L + G+ P A+V + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
I+RDL+ NILV + DF L+
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLA 152
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 865 DWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
D W+FGI L EL+ GR P+ G N E L V
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + D+ L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 824 QIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTP 882
+++ L +A TD +V T Y APEI+ H VD W+ G + ELL GRT
Sbjct: 163 ELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 883 FKGSGNEETLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
F G+ + + L ++++ + P + L+ S AR+ I+ L
Sbjct: 223 FPGTDHIDQL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 47 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 103
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 158
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T + + P
Sbjct: 159 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGXVATRWYRAPEI 213
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 262
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 191 LARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 251 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 282
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 161
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 209
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQ 252
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 253 VFFRQR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 291
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 176
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 224
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 267
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 268 VFFRQR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 306
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 608 LRHFNLL--QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP-----RAQTER 660
L H +L+ +++G G+ G V+ L N L A+K + R+ +P + E
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK-------SCRETLPPDLKAKFLQEA 163
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHV--------LRQKQLGKCFSEPA 712
IL+ HP + L T +VME GGD LR K L + + A
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 713 ARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A +EYL I+RDL N LV E + ++DF +S
Sbjct: 224 A---------GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEET 891
++ APE + + + D W+FGI L+E G +P+ N++T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 675 YSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVI 733
+ +++ +V ++C G L H L + F + ++YLH +I
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKSII 142
Query: 734 YRDLKPENILVREDGHIMLTDFDLS 758
+RDLK NI + ED + + DF L+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 902 FPD 904
PD
Sbjct: 244 SPD 246
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 93/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 824 QIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTP 882
+++ L +A TD +V T Y APEI+ H VD W+ G + ELL GRT
Sbjct: 163 ELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 883 FKGSGNEETLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
F G+ + + L ++++ + P + L+ S AR+ I+ L
Sbjct: 223 FPGTDHIDQL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 69
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + + GK P A++ + Y+ + ++R
Sbjct: 70 AVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 128
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 129 DLRAANILVGENLVCKVADFGLA 151
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ KE
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 924 PENR 927
PE R
Sbjct: 246 PEER 249
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ + H L LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKIRHEKLVQLY 79
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 80 AVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 924 PENR 927
PE R
Sbjct: 256 PEER 259
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 608 LRHFNLL--QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP-----RAQTER 660
L H +L+ +++G G+ G V+ L N L A+K + R+ +P + E
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK-------SCRETLPPDLKAKFLQEA 163
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHV--------LRQKQLGKCFSEPA 712
IL+ HP + L T +VME GGD LR K L + + A
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 713 ARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A +EYL I+RDL N LV E + ++DF +S
Sbjct: 224 A---------GMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEET 891
++ APE + + + D W+FGI L+E G +P+ N++T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 47/187 (25%)
Query: 713 ARFYVAEVLLALEYLHMLGVIYRDLKPENILV-REDGHIMLTDFDLSLRCSVSPTLLKSS 771
R Y+ + AL+ +H G+++RD+KP N L R L DF L+
Sbjct: 119 VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA------------Q 166
Query: 772 SNMDPARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQL 831
D +S Q C + C + C S R+ + P A
Sbjct: 167 GTHDTKIELLKFVQSEAQQERCSQNKCSI-CLS----------RRQQVAPRA-------- 207
Query: 832 VAEPTDARSNSFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPF-KGSGNE 889
GT + APE++ K A+D W+ G+ LL GR PF K S +
Sbjct: 208 -------------GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL 254
Query: 890 ETLANVV 896
LA ++
Sbjct: 255 TALAQIM 261
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H +
Sbjct: 30 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 675 YSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVI 733
T+ L+ +V ++C G L H L + F + ++YLH +I
Sbjct: 86 MGYSTAPQLA-IVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKSII 142
Query: 734 YRDLKPENILVREDGHIMLTDFDLS 758
+RDLK NI + ED + + DF L+
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 902 FPD 904
PD
Sbjct: 244 SPD 246
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 79
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 80 AVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL NILV E+ + DF L+
Sbjct: 139 DLAAANILVGENLVCKVADFGLA 161
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 924 PENR 927
PE R
Sbjct: 256 PEER 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 70
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 71 AVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 130 DLRAANILVGENLVCKVADFGLA 152
Score = 36.6 bits (83), Expect = 0.062, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 924 PENR 927
PE R
Sbjct: 247 PEER 250
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 68
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 69 AVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 128 DLRAANILVGENLVCKVADFGLA 150
Score = 36.6 bits (83), Expect = 0.065, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 924 PENR 927
PE R
Sbjct: 245 PEER 248
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
RH L++LG G+ G+V + T + A+K + + + + + + E EIL+
Sbjct: 13 RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 69
Query: 665 MLDH----PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV 720
L H + YS NL L+ME+ P G L QK + Y +++
Sbjct: 70 SLQHDNIVKYKGVCYSA-GRRNLK-LIMEFLPYGSLREYLQKHKER-IDHIKLLQYTSQI 126
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL NILV + + + DF L+
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 605 SIGLRHFNL-------LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQ 657
SIG ++F + + +LG G G V + + + A+K + ++ +K R
Sbjct: 40 SIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK--RLL 97
Query: 658 TEREI-LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQK-QLGKCFSEPAARF 715
+ +I +R +D PF T Y + + ME +Q G+ E
Sbjct: 98 MDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGK 157
Query: 716 YVAEVLLALEYLH-MLGVIYRDLKPENILVREDGHIMLTDFDLS--LRCSVSPTL 767
++ ALE+LH L VI+RD+KP N+L+ G + + DF +S L SV+ T+
Sbjct: 158 IAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 841 NSFVGTHEYLAPEIIKGEGHG-----------AAVDWWTFGIFLYELLYGRTPFKGSGNE 889
+S VGT Y+ PE IK D W+ G LY + YG+TPF+ N+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
Query: 890 ETLANVVM---QSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
+ + ++ ++FPD P Q D+++ L ++P+ R+ E+ HP+ +
Sbjct: 246 ISKLHAIIDPNHEIEFPDIPEKDLQ--DVLKCCLKRDPKQRI----SIPELLAHPYVQ 297
Score = 38.9 bits (89), Expect = 0.014, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 8/160 (5%)
Query: 601 LQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTER 660
Q S+ R +++L+++G G V+ L ++AIK ++ E A + + + E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLE-EADNQTLDSYRNEI 77
Query: 661 EILRMLDHPF--LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
L L + LY +D +VME C DL+ +K+ K + Y
Sbjct: 78 AYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWK 134
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+L A+ +H G+++ DLKP N L+ DG + L DF ++
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIA 173
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKXVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYI 321
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 18 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 72
Query: 675 YSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVI 733
+ +++ +V ++C G L H L + F + ++YLH +I
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETK--FEMKKLIDIARQTARGMDYLHAKSII 130
Query: 734 YRDLKPENILVREDGHIMLTDFDLS 758
+RDLK NI + ED + + DF L+
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLA 155
Score = 36.6 bits (83), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 902 FPD 904
PD
Sbjct: 232 SPD 234
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 616 KLGCGDIGTVY--LAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPT 673
+LGCG+ G+V + + AIKV+ + E +I+ LD+P++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 674 LYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL----LALEYLHM 729
L ++ L LVME GG LH + +GK P + VAE+L + ++YL
Sbjct: 75 LIGVCQAEAL-MLVMEMAGGGPLH---KFLVGKREEIPVSN--VAELLHQVSMGMKYLEE 128
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
++RDL N+L+ + ++DF LS
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLS 157
Score = 33.5 bits (75), Expect = 0.66, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W++G+ ++E L YG+ P+K E +A
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA 224
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T + + + P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD FV T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T + + + P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD FV T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 119
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 174
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 343 DPAKRISVDDAL----QHPYI 359
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 10/151 (6%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLA---RRKKMPRAQTEREILRMLD 667
F L +LG G G V+ L+A+K + F R +K+ + ++ +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ--- 115
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
HP L + + L E C P H + G E Y+ + LLAL +
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHC---EAWGASLPEAQVWGYLRDTLLALAH 172
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
LH G+++ D+KP NI + G L DF L
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 79
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 134
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + DF L+ T + + + P
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMAGFVATRWYRAPEI 189
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 238
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD FV T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 227 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 258
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNX 129
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 177
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 220
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R + EI+ HP+ +
Sbjct: 221 VFFRQR------VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQ 259
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYI 321
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 133
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 181
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 167 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 224
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R + EI+ HP+ +
Sbjct: 225 VFFRQR------VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQ 263
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 129
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 177
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQ 220
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R + EI+ HP+ +
Sbjct: 221 VFFRQR------VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQ 259
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VYLA T AIK ++ F L K++ R T IL L ++ L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLKSDYIIRL 90
Query: 675 YSQFTSDNLS-----CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM 729
Y D+L +V+E DL L + + +E + + +LL ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHE 147
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
G+I+RDLKP N L+ +D + + DF L+
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.8 bits (112), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 129
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 177
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 220
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R + EI+ HP+ +
Sbjct: 221 VFFRQR------VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQ 259
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 132
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 180
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 166 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 223
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R + EI+ HP+ +
Sbjct: 224 VFFRQR------VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQ 262
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKXVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYI 321
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E ++++++
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKVVN 81
Query: 668 HPFLPTLYSQFT-SDNLS-----CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +L +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ +++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G+ + E++ G F G+ + + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 305 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 74
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQML 129
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 298 DPAKRISVDDAL----QHPYI 314
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 82
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 137
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 306 DPAKRISVDDAL----QHPYI 322
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 5 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 53
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 54 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 111
Query: 702 KQ----LGKCFS-------EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVRED 747
+ L C++ + +++ V+ +V +EYL I+RDL N+LV ED
Sbjct: 112 ARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 171
Query: 748 GHIMLTDFDLS 758
+ + DF L+
Sbjct: 172 NVMKIADFGLA 182
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYI 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 82
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 137
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 306 DPAKRISVDDAL----QHPYI 322
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 33/165 (20%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
+F + +K+GCG+ G + L + + TN AIK+ + + P+ E
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLE-----PMKSRAPQLHLEYR-------- 56
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-----------KCFSEPAARFYVA 718
Y Q S + V + P G + + + LG + FS
Sbjct: 57 ----FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAI 112
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGH-----IMLTDFDLS 758
+++ +EY+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 80
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 81 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 135
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 244 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 303
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 304 DPAKRISVDDAL----QHPYI 320
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
I + + + +G G G V A+ + AIK +++E + RK E L
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESE--SERKAF---IVELRQLSR 58
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLAL 724
++HP + LY N CLVMEY GG L+ VL + ++ A + + +
Sbjct: 59 VNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 725 EYLHML---GVIYRDLKPENILVREDGHIM-LTDF 755
YLH + +I+RDLKP N+L+ G ++ + DF
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 151
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGN 888
G+ ++APE+ +G + D +++GI L+E++ R PF G
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG 209
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKXVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 305 DPAKRISVDDAL----QHPYI 321
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 76
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + + GK P A++ + Y+ + ++R
Sbjct: 77 AVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 136 DLRAANILVGENLVCKVADFGLA 158
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 924 PENR 927
PE R
Sbjct: 253 PEER 256
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 156
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 204
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 190 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 247
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R + EI+ HP+ +
Sbjct: 248 VFFRQR------VSXECQHLIRWCLALRPSDRPTFE----EIQNHPWMQ 286
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 128
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 902 FPD 904
PD
Sbjct: 233 SPD 235
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 151
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 902 FPD 904
PD
Sbjct: 256 SPD 258
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 151
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 902 FPD 904
PD
Sbjct: 256 SPD 258
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 79
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + ++GK P A++ + Y+ + ++R
Sbjct: 80 AVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 139 DLRAANILVGENLVCKVADFGLA 161
Score = 37.0 bits (84), Expect = 0.055, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 924 PENR 927
PE R
Sbjct: 256 PEER 259
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI--LRMLDH 668
F ++ +G G G V+ A+ ++ ++ +R K + ERE+ L LDH
Sbjct: 13 FKEIELIGSGGFGQVFKAKH---------RIDGKTYVIKRVKYNNEKAEREVKALAKLDH 63
Query: 669 -------------PFLPTLYSQFTS-DNLSCLV--MEYCPGGDLHVLRQKQLGKCFSEPA 712
+ P S+ +S CL ME+C G L +K+ G+ +
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 713 ARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
A ++ ++Y+H +I RDLKP NI + + + + DF L
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLY-GRTPFKGSGNEETLANV 895
D + GT Y++PE I + +G VD + G+ L ELL+ T F+ S L +
Sbjct: 175 DGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 234
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENR 927
++ S + + + L++ LL K+PE+R
Sbjct: 235 II-------SDIFDKKEKTLLQKLLSKKPEDR 259
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 133
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 181
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 167 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 224
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R + EI+ HP+ +
Sbjct: 225 VFFRQR------VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQ 263
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 41 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 95
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 150
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 902 FPD 904
PD
Sbjct: 255 SPD 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP---RAQTEREILRMLDHPF--L 671
LG G G+VY + N AIK ++ + ++ ++P R E +L+ + F +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 672 PTLYSQFTSDNLSCLVMEYC-PGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
L F + L++E P DL ++ E AR + +VL A+ + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNC 134
Query: 731 GVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPTLLKSS--SNMDPARVSGP 782
GV++RD+K ENIL+ + G + L DF S LLK + ++ D RV P
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFG-------SGALLKDTVYTDFDGTRVYSP 182
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 225
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R + EI+ HP+ +
Sbjct: 226 VFFRQR------VSSECQHLIRWCLALRPSDRPTFE----EIQNHPWMQ 264
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 76
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + + GK P A++ + Y+ + ++R
Sbjct: 77 AVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 136 DLRAANILVGENLVCKVADFGLA 158
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 924 PENR 927
PE R
Sbjct: 253 PEER 256
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 16 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 70
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 125
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 126 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 902 FPD 904
PD
Sbjct: 230 SPD 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + F L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A TD +V T Y APEI+ H VD W+ G + ELL GRT F G+ + +
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 891 TLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
L ++++ + P + L+ S AR+ I+ L
Sbjct: 231 QL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 128
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 902 FPD 904
PD
Sbjct: 233 SPD 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 34 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 88
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 143
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 902 FPD 904
PD
Sbjct: 248 SPD 250
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 35/191 (18%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 20 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 68
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 69 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 702 KQ----LGKCFS-------EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVRED 747
+ L C++ + +++ V+ +V +EYL I+RDL N+LV ED
Sbjct: 127 ARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 748 GHIMLTDFDLS 758
+ + DF L+
Sbjct: 187 NVMKIADFGLA 197
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 75
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 130
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 299 DPAKRISVDDAL----QHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 74
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 129
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 298 DPAKRISVDDAL----QHPYI 314
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
++ ++ LLQ +G G+ G V L + G A+K + N+ A+ E ++
Sbjct: 189 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMT 241
Query: 665 MLDHPFLPTLYSQFTSDNLSC-LVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLL 722
L H L L + +V EY G L LR + + +F + +V
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 300
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A+EYL ++RDL N+LV ED ++DF L+
Sbjct: 301 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPF 883
++ APE ++ + D W+FGI L+E+ +GR P+
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 6/143 (4%)
Query: 616 KLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLY 675
KLG G G V++ GT + AIK + ++ + AQ +++ L H L LY
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEKLVQLY 72
Query: 676 SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYR 735
+ + + + +V EY G L + + GK P A++ + Y+ + ++R
Sbjct: 73 AVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 131
Query: 736 DLKPENILVREDGHIMLTDFDLS 758
DL+ NILV E+ + DF L+
Sbjct: 132 DLRAANILVGENLVCKVADFGLA 154
Score = 38.1 bits (87), Expect = 0.025, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 865 DWWTFGIFLYELLY-GRTPFKGSGNEETLANVVMQSLKFPDSPLISFQARDLIRGLLIKE 923
D W+FGI L EL GR P+ G N E L + V + + P P DL+ KE
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 924 PENR 927
PE R
Sbjct: 249 PEER 252
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF--LP 672
+K+GCG+ G + L + + TN AIK+ + + P+ E + L LP
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVAIKLE-----PIKSRAPQLHLEYRFYKQLGSAGEGLP 60
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGV 732
+Y + +V+E G L L + F+ ++L +EY+H +
Sbjct: 61 QVYYFGPXGKYNAMVLELL-GPSLEDLFD-LCDRTFTLKTVLMIAIQLLSRMEYVHSKNL 118
Query: 733 IYRDLKPENILVREDGH-----IMLTDFDLS 758
IYRD+KPEN L+ G+ I + DF L+
Sbjct: 119 IYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD-HP 669
F L +K+G G G +YL I TN AIK+ + + K P+ E +I R+L
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-----KTKHPQLLYESKIYRILQGGT 63
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLA------ 723
+P + + + LVM+ L L F+ + + + VL+
Sbjct: 64 GIPNVRWFGVEGDYNVLVMD---------LLGPSLEDLFNFCSRKLSLKTVLMLADQMIN 114
Query: 724 -LEYLHMLGVIYRDLKPENILV---REDGHIMLTDFDLS 758
+E++H ++RD+KP+N L+ R + + DF L+
Sbjct: 115 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCL--VMEYCPGGDLH--VLRQKQLGKCFSEPAA 713
+E +LR L HP + Y + + L VMEYC GGDL + + + + E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 714 RFYVAEVLLALEYLHMLG-----VIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ LAL+ H V++RDLKP N+ + ++ L DF L+
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 36.6 bits (83), Expect = 0.072, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+ FVGT Y++PE + + D W+ G LYEL PF +E
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E ++++++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKVVN 81
Query: 668 HPFLPTLYSQFT-SDNLS-----CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +L +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ +++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G+ + E++ G F G+ + + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 305 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 82/213 (38%), Gaps = 37/213 (17%)
Query: 597 RHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIG-----TNCLFAIKVMDN------- 644
+H + + I L +++LG G VY L G AIK + +
Sbjct: 14 QHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 645 -EFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH---VLR 700
EF R + M RA+ L HP + L T D ++ YC GDLH V+R
Sbjct: 74 EEF--RHEAMLRAR--------LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMR 123
Query: 701 -----------QKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGH 749
+ + P VA++ +EYL V+++DL N+LV + +
Sbjct: 124 SPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN 183
Query: 750 IMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
+ ++D L + +++ P R P
Sbjct: 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++APE I D W++G+ L+E+ YG P+ G N++ + +
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A + AIK + F + RA E +++ ++
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 75
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + +L + FT LVME V++ + + + ++L
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQML 130
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 44/141 (31%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 897 ----MQSLK---------------------FPDS---------PLISFQARDLIRGLLIK 922
M+ L+ FPDS L + QARDL+ +L+
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 923 EPENRLGSQKGAAEIKQHPFF 943
+P R+ QHP+
Sbjct: 299 DPAKRISVDDAL----QHPYI 315
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 617 LGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPT 673
+G GD G V L + AIK + + R+++ +E I+ DHP +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR--DFLSEASIMGQFDHPNIIR 114
Query: 674 LYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVI 733
L T L+ +V EY G L + G+ F+ + V + YL LG +
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYLSDLGYV 173
Query: 734 YRDLKPENILVREDGHIMLTDFDLS 758
+RDL N+LV + ++DF LS
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ APE I +A D W+FG+ ++E+L YG P+ N + +++V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 46.6 bits (109), Expect = 8e-05, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 28/169 (16%)
Query: 604 GSIGLR---HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTER 660
GS+ LR + L +K+G G G +YL I AIK+ + K P+ E
Sbjct: 1 GSMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE-----CVKTKHPQLHIES 55
Query: 661 EILRMLDHPF-LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
+I +M+ +PT+ + + +VME L L F+ + +F +
Sbjct: 56 KIYKMMQGGVGIPTIRWCGAEGDYNVMVME---------LLGPSLEDLFNFCSRKFSLKT 106
Query: 720 VLL-------ALEYLHMLGVIYRDLKPENILV---REDGHIMLTDFDLS 758
VLL +EY+H I+RD+KP+N L+ ++ + + DF L+
Sbjct: 107 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 824 QIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTP 882
+++ L + +A TD +V T Y APEI+ H VD W+ G + ELL GRT
Sbjct: 163 ELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 883 FKGSGNEETLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
F G+ + + L ++++ + P + L+ S AR+ I+ L
Sbjct: 223 FPGTDHIDQL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + D L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
I + + + +G G G V A+ + AIK +++E + RK E L
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESE--SERKAF---IVELRQLSR 57
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEVLLAL 724
++HP + LY N CLVMEY GG L+ VL + ++ A + + +
Sbjct: 58 VNHPNIVKLYG--ACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 725 EYLHML---GVIYRDLKPENILVREDGHIM-LTDF 755
YLH + +I+RDLKP N+L+ G ++ + DF
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDF 150
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 845 GTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGN 888
G+ ++APE+ +G + D +++GI L+E++ R PF G
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG 208
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 123
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 36.6 bits (83), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 902 FPD 904
PD
Sbjct: 228 SPD 230
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
+ +++ +V ++C G L H++ K F + ++YLH
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 123
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 902 FPD 904
PD
Sbjct: 228 SPD 230
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E ++++++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKVVN 81
Query: 668 HPFLPTLYSQFT-SDNLS-----CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +L +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ +++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 305 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
++ ++ LLQ +G G+ G V L + G A+K + N+ A+ E ++
Sbjct: 17 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMT 69
Query: 665 MLDHPFLPTLYSQFTSDNLSC-LVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLL 722
L H L L + +V EY G L LR + + +F + +V
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 128
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A+EYL ++RDL N+LV ED ++DF L+
Sbjct: 129 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPF 883
++ APE ++ + D W+FGI L+E+ +GR P+
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 617 LGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPT 673
+G GD G V L + AIK + + R+++ +E I+ DHP +
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR--DFLSEASIMGQFDHPNIIR 114
Query: 674 LYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVI 733
L T L+ +V EY G L + G+ F+ + V + YL LG +
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ-FTIMQLVGMLRGVGAGMRYLSDLGYV 173
Query: 734 YRDLKPENILVREDGHIMLTDFDLS 758
+RDL N+LV + ++DF LS
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ APE I +A D W+FG+ ++E+L YG P+ N + +++V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
Q++G G GTVY + G A+K++ N +++ + E +LR H +
Sbjct: 14 QRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 675 YSQFTSDNLSCLVMEYCPGGDL----HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHML 730
T+ L+ +V ++C G L H++ K F + ++YLH
Sbjct: 70 MGYSTAPQLA-IVTQWCEGSSLYHHLHIIETK-----FEMIKLIDIARQTAQGMDYLHAK 123
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
+I+RDLK NI + ED + + DF L+
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 36.6 bits (83), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 845 GTHEYLAPEIIKGEG---HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
G+ ++APE+I+ + + D + FGI LYEL+ G+ P+ N + + +V +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 902 FPD 904
PD
Sbjct: 228 SPD 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
++ ++ LLQ +G G+ G V L + G A+K + N+ A+ E ++
Sbjct: 8 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMT 60
Query: 665 MLDHPFLPTLYSQFTSDNLSC-LVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLL 722
L H L L + +V EY G L LR + + +F + +V
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 119
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A+EYL ++RDL N+LV ED ++DF L+
Sbjct: 120 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPF 883
++ APE ++ D W+FGI L+E+ +GR P+
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREI 662
IG + LL+KLG G G V E G A+K + + L++ + M E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+ LDH L LY + + +V E P G L +K G +R Y +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 126
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+ YL I+RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE +K A D W FG+ L+E+ YG+ P+ G + L + + + P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 33/165 (20%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
+F + +K+GCG+ G + L + + TN AIK+ + + P+ E
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLE-----PMKSRAPQLHLEYR-------- 56
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-----------KCFSEPAARFYVA 718
Y Q S + V + P G + + + LG + FS
Sbjct: 57 ----FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAI 112
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGH-----IMLTDFDLS 758
+++ +EY+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 33/165 (20%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
+F + +K+GCG+ G + L + + TN AIK+ + + P+ E
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLE-----PMKSRAPQLHLEYR-------- 77
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-----------KCFSEPAARFYVA 718
Y Q S + V + P G + + + LG + FS
Sbjct: 78 ----FYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAI 133
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGH-----IMLTDFDLS 758
+++ +EY+H +IYRD+KPEN L+ G+ I + DF L+
Sbjct: 134 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 33/165 (20%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP 669
+F + +K+GCG+ G + L + + TN AIK+ + + P+ E
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLE-----PIKSRAPQLHLEYR-------- 51
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG-----------KCFSEPAARFYVA 718
Y Q ++ V + P G + + + LG + F+
Sbjct: 52 ----FYKQLSATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAI 107
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDG-----HIMLTDFDLS 758
+++ +EY+H +IYRD+KPEN LV G I + DF L+
Sbjct: 108 QLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + D L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 824 QIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTP 882
+++ L +A TD +V T Y APEI+ H VD W+ G + ELL GRT
Sbjct: 163 ELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 883 FKGSGNEETLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
F G+ + + L ++++ + P + L+ S AR+ I+ L
Sbjct: 223 FPGTDHIDQL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 92/231 (39%), Gaps = 24/231 (10%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFL 671
L +G G G+V A T A+K + F + K+ R E +L+ + H +
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENV 83
Query: 672 PTLYSQFT-----SDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLAL 724
L FT + ++ + G DL+ + KC ++ +F + ++L L
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLN-----NIVKCQKLTDDHVQFLIYQILRGL 138
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCT 784
+Y+H +I+RDLKP N+ V ED + + D L+ T ++ P
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEI 193
Query: 785 ESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEP 835
N + V C L T +T P D Q++ + +LV P
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELL--TGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 824 QIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTP 882
+++ L +A TD +V T Y APEI+ H VD W+ G + ELL GRT
Sbjct: 163 ELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 883 FKGSGNEETLANVVMQSLKFPDSPLI----SFQARDLIRGL 919
F G+ + + L ++++ + P + L+ S AR+ I+ L
Sbjct: 223 FPGTDHIDQL-KLILRLVGTPGAELLKKISSESARNYIQSL 262
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 608 LRHFNLLQ---KLGCGDIGTVY--LAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI 662
L+ NLL +LGCG+ G+V + + AIKV+ + E +I
Sbjct: 332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQI 389
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL- 721
+ LD+P++ L ++ L LVME GG LH +GK P + VAE+L
Sbjct: 390 MHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKF---LVGKREEIPVSN--VAELLH 443
Query: 722 ---LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++YL ++R+L N+L+ + ++DF LS
Sbjct: 444 QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I + D W++G+ ++E L YG+ P+K E +A +
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L + LG G + V+LA + + A+KV+ + R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 671 LPTLYSQFTSDN----LSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+ +Y ++ L +VMEY G L + + + A +A+ AL +
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNF 131
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H G+I+RD+KP NIL+ + + DF ++
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIA 163
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
++ + +GT +YL+PE +G+ A D ++ G LYE+L G PF G ++ +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 230
Query: 899 SLK---FPDSPLISFQARDL---IRGLLIKEPENRLGSQKGAAEIKQHPFFEGLNWALIR 952
++ P S + DL + L K PENR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 953 CAIPPELP 960
PPE P
Sbjct: 281 NGEPPEAP 288
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
++ ++ LLQ +G G+ G V L + G A+K + N+ A+ E ++
Sbjct: 2 ALNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKNDATAQA-----FLAEASVMT 54
Query: 665 MLDHPFLPTLYSQFTSDNLSC-LVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLL 722
L H L L + +V EY G L LR + + +F + +V
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 113
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
A+EYL ++RDL N+LV ED ++DF L+
Sbjct: 114 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPF 883
++ APE ++ + D W+FGI L+E+ +GR P+
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVM---DNEFLARRKKMPRAQTEREILRMLD 667
F L LG G G V A T + AIK + D A R E +IL+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR-----TLREIKILKHFK 67
Query: 668 HPFLPTLYSQFTSDNLS----CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLA 723
H + T+++ D+ +++ DLH + Q+ S+ ++++ + L A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM---LSDDHIQYFIYQTLRA 124
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ LH VI+RDLKP N+L+ + + + DF L+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 37/145 (25%)
Query: 833 AEPTDARS--NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNE 889
+EPT +S V T Y APE+ + + A+D W+ G L EL R F G
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 890 ETL-----------------------ANVVMQSL-KFPDSPLISFQAR------DLIRGL 919
L A ++SL +P +PL R DL++ +
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 920 LIKEPENRLGSQKGAAEIKQHPFFE 944
L+ +P R+ A E +HP+ +
Sbjct: 290 LVFDPAKRI----TAKEALEHPYLQ 310
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 132/372 (35%), Gaps = 112/372 (30%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVM---DNEFLARRKKMPRAQTEREILRMLD 667
F L LG G G V A T + AIK + D A R E +IL+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR-----TLREIKILKHFK 67
Query: 668 HPFLPTLYSQFTSDNLS----CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLA 723
H + T+++ D+ +++ DLH + Q+ S+ ++++ + L A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM---LSDDHIQYFIYQTLRA 124
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPC 783
++ LH VI+RDLKP N+L+ + + + DF L AR+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL-------------------ARIIDES 165
Query: 784 TESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSF 843
N ++P Q + + VA
Sbjct: 166 AADN-------------------------------SEPTGQQSGMVEFVA---------- 184
Query: 844 VGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL---------- 892
T Y APE+ + + A+D W+ G L EL R F G L
Sbjct: 185 --TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 893 -------------ANVVMQSL-KFPDSPLISFQAR------DLIRGLLIKEPENRLGSQK 932
A ++SL +P +PL R DL++ +L+ +P R+
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRI---- 298
Query: 933 GAAEIKQHPFFE 944
A E +HP+ +
Sbjct: 299 TAKEALEHPYLQ 310
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREI 662
IG + LL+KLG G G V E G A+K + + L++ + M E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+ LDH L LY + + +V E P G L +K G +R Y +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 132
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+ YL I+RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE +K A D W FG+ L+E+ YG+ P+ G + L + + + P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 24/191 (12%)
Query: 601 LQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTER 660
L+Y S F + LG G G V A + +AIK + + +K+ +E
Sbjct: 2 LRYAS----DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEV 53
Query: 661 EILRMLDHPFLPTLYSQFTS-----------DNLSCLVM--EYCPGGDLH-VLRQKQLGK 706
+L L+H ++ Y+ + S L + EYC L+ ++ + L +
Sbjct: 54 XLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQ 113
Query: 707 CFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
E F ++L AL Y+H G+I+R+LKP NI + E ++ + DF L+ S
Sbjct: 114 QRDEYWRLF--RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 767 LLKSSSNMDPA 777
+LK S P
Sbjct: 172 ILKLDSQNLPG 182
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 842 SFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFK-GSGNEETLANVVMQS 899
S +GT Y+A E++ G GH +D ++ GI +E +Y PF G L + S
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVS 245
Query: 900 LKFP---DSPLISFQARDLIRGLLIKEPENRLGSQ 931
++FP D + + +IR L+ +P R G++
Sbjct: 246 IEFPPDFDDNKXKVE-KKIIRLLIDHDPNKRPGAR 279
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF--YVAEV 720
+R DHP + L T +N ++ME C G+L Q + FS A Y ++
Sbjct: 445 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQL 500
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
AL YL ++RD+ N+LV + + L DF LS R T K+S P +
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWM 559
Query: 781 GP 782
P
Sbjct: 560 AP 561
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 78/204 (38%), Gaps = 37/204 (18%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIG-----TNCLFAIKVMDN--------EFLARRKK 652
I L +++LG G VY L G AIK + + EF R +
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF--RHEA 63
Query: 653 MPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH---VLR--------- 700
M RA+ L HP + L T D ++ YC GDLH V+R
Sbjct: 64 MLRAR--------LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGST 115
Query: 701 --QKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ + P VA++ +EYL V+++DL N+LV + ++ ++D L
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF 175
Query: 759 LRCSVSPTLLKSSSNMDPARVSGP 782
+ +++ P R P
Sbjct: 176 REVYAADYYKLLGNSLLPIRWMAP 199
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++APE I D W++G+ L+E+ YG P+ G N++ + +
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 132/372 (35%), Gaps = 112/372 (30%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVM---DNEFLARRKKMPRAQTEREILRMLD 667
F L LG G G V A T + AIK + D A R E +IL+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALR-----TLREIKILKHFK 67
Query: 668 HPFLPTLYSQFTSDNLS----CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLA 723
H + T+++ D+ +++ DLH + Q+ S+ ++++ + L A
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQM---LSDDHIQYFIYQTLRA 124
Query: 724 LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPC 783
++ LH VI+RDLKP N+L+ + + + DF L AR+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL-------------------ARIIDES 165
Query: 784 TESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLPQLVAEPTDARSNSF 843
N ++P Q + + VA
Sbjct: 166 AADN-------------------------------SEPTGQQSGMTEYVA---------- 184
Query: 844 VGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL---------- 892
T Y APE+ + + A+D W+ G L EL R F G L
Sbjct: 185 --TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242
Query: 893 -------------ANVVMQSL-KFPDSPLISFQAR------DLIRGLLIKEPENRLGSQK 932
A ++SL +P +PL R DL++ +L+ +P R+
Sbjct: 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRI---- 298
Query: 933 GAAEIKQHPFFE 944
A E +HP+ +
Sbjct: 299 TAKEALEHPYLQ 310
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 20 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 68
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 69 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 702 KQL--GKCFS---------EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVRED 747
+ G FS + +++ V+ +V +EYL I+RDL N+LV ED
Sbjct: 127 ARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 748 GHIMLTDFDLS 758
+ + DF L+
Sbjct: 187 NVMKIADFGLA 197
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E ++++++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKVVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 305 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREI 662
IG + LL+KLG G G V E G A+K + + L++ + M E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+ LDH L LY + + +V E P G L +K G +R Y +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 132
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+ YL I+RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE +K A D W FG+ L+E+ YG+ P+ G + L + + + P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L + LG G + V+LA + + A+KV+ + R + E + L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 671 LPTLYSQFTSDN----LSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+ +Y ++ L +VMEY G L + + + A +A+ AL +
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNF 148
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
H G+I+RD+KP NI++ + + DF ++
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIA 180
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 839 RSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQ 898
++ + +GT +YL+PE +G+ A D ++ G LYE+L G PF G ++ +V Q
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 247
Query: 899 SLK---FPDSPLISFQARDL---IRGLLIKEPENRLGSQKGAAEIK 938
++ P S + DL + L K PENR + AAE++
Sbjct: 248 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR 290
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 11/165 (6%)
Query: 604 GSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI- 662
GS+ + + ++G G GTVY A + A+K + T RE+
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 663 ----LRMLDHPFLPTLY-----SQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAA 713
L +HP + L S+ + LV E+ DL K
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 714 RFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ + + L L++LH +++RDLKPENILV G + L DF L+
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREI 662
IG + LL+KLG G G V E G A+K + + L++ + M E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+ LDH L LY + + +V E P G L +K G +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+ YL I+RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE +K A D W FG+ L+E+ YG+ P+ G + L + + + P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREI 662
IG + LL+KLG G G V E G A+K + + L++ + M E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+ LDH L LY + + +V E P G L +K G +R Y +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 126
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+ YL I+RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE +K A D W FG+ L+E+ YG+ P+ G + L + + + P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 160 HELRKLRLIDWGLA 173
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 126 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 180
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 181 HELRKLRLIDWGLA 194
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
FV T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 246
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 247 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 306
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 307 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 341
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 83
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 138
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 107 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 161
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 162 HELRKLRLIDWGLA 175
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 19/209 (9%)
Query: 587 MSADVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF 646
MS D +WE R I ++H KLG G G VY + A+K + +
Sbjct: 1 MSLD-KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT 48
Query: 647 LARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGK 706
+ + + A +EI HP L L T + ++ E+ G+L ++ +
Sbjct: 49 MEVEEFLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 104
Query: 707 CFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
S + ++ A+EYL I+RDL N LV E+ + + DF LS R T
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 163
Query: 767 LLKSSSNMDPARVSGPCTESNCIQPFCIE 795
+ P + + P ES F I+
Sbjct: 164 FTAHAGAKFPIKWTAP--ESLAYNKFSIK 190
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 106 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 160
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 161 HELRKLRLIDWGLA 174
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+R DHP + L T +N ++ME C G+L Q + + Y ++
Sbjct: 68 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 125
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
AL YL ++RD+ N+LV + + L DF LS R T K+S P + P
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAP 184
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 5/148 (3%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI-LRMLDHPFLP 672
+ +LG G G V + + + A+K + ++ +K R + +I +R +D PF
Sbjct: 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK--RLLMDLDISMRTVDCPFTV 69
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDLHVLRQK-QLGKCFSEPAARFYVAEVLLALEYLH-ML 730
T Y + + ME +Q G+ E ++ ALE+LH L
Sbjct: 70 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLS 758
VI+RD+KP N+L+ G + + DF +S
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 106 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 160
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 161 HELRKLRLIDWGLA 174
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF--YVAEV 720
+R DHP + L T +N ++ME C G+L Q + FS A Y ++
Sbjct: 65 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQL 120
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
AL YL ++RD+ N+LV + + L DF LS R T K+S P +
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTXXKASKGKLPIKWM 179
Query: 781 GP 782
P
Sbjct: 180 AP 181
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREI 662
IG + LL+KLG G G V E G A+K + + L++ + M E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+ LDH L LY + + +V E P G L +K G +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+ YL I+RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE +K A D W FG+ L+E+ YG+ P+ G + L + + + P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCL--VMEYCPGGDLH--VLRQKQLGKCFSEPAA 713
+E +LR L HP + Y + + L VMEYC GGDL + + + + E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 714 RFYVAEVLLALEYLHMLG-----VIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ LAL+ H V++RDLKP N+ + ++ L DF L+
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
+ +FVGT Y++PE + + D W+ G LYEL PF +E +
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 79/197 (40%), Gaps = 47/197 (23%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 20 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 68
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 69 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 702 KQLGKCFSEPAARFY--------------------VAEVLLALEYLHMLGVIYRDLKPEN 741
+ EP Y +V +EYL I+RDL N
Sbjct: 127 AR------EPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 180
Query: 742 ILVREDGHIMLTDFDLS 758
+LV ED + + DF L+
Sbjct: 181 VLVTEDNVMKIADFGLA 197
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCL--VMEYCPGGDLH--VLRQKQLGKCFSEPAA 713
+E +LR L HP + Y + + L VMEYC GGDL + + + + E
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 714 RFYVAEVLLALEYLHMLG-----VIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ LAL+ H V++RDLKP N+ + ++ L DF L+
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 840 SNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
+ +FVGT Y++PE + + D W+ G LYEL PF +E +
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+R DHP + L T +N ++ME C G+L Q + + Y ++
Sbjct: 67 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 124
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
AL YL ++RD+ N+LV + + L DF LS R T K+S P + P
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAP 183
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+R DHP + L T +N ++ME C G+L Q + + Y ++
Sbjct: 93 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 150
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
AL YL ++RD+ N+LV + + L DF LS R T K+S P + P
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAP 209
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+R DHP + L T +N ++ME C G+L Q + + Y ++
Sbjct: 70 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 127
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
AL YL ++RD+ N+LV + + L DF LS R T K+S P + P
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAP 186
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 43/204 (21%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREI--LRMLDH 668
F ++ +G G G V+ A+ ++ ++ RR K + ERE+ L LDH
Sbjct: 14 FKEIELIGSGGFGQVFKAKH---------RIDGKTYVIRRVKYNNEKAEREVKALAKLDH 64
Query: 669 PFLPTL--------YSQFTSDN-------------------LSCLV--MEYCPGGDLHVL 699
+ Y TSD+ CL ME+C G L
Sbjct: 65 VNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 700 RQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL-- 757
+K+ G+ + A ++ ++Y+H +I+RDLKP NI + + + + DF L
Sbjct: 125 IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVT 184
Query: 758 SLRCSVSPTLLKSS-SNMDPARVS 780
SL+ T K + M P ++S
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQIS 208
Score = 39.7 bits (91), Expect = 0.009, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLY-GRTPFKGSGNEETLANV 895
D + GT Y++PE I + +G VD + G+ L ELL+ T F+ S L +
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 248
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENR 927
++ S + + + L++ LL K+PE+R
Sbjct: 249 II-------SDIFDKKEKTLLQKLLSKKPEDR 273
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 44.7 bits (104), Expect = 3e-04, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 25/159 (15%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
+ L +K+G G G +YL I AIK+ + K P+ E +I +M+
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE-----CVKTKHPQLHIESKIYKMMQGGV 63
Query: 671 -LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL------- 722
+PT+ + + +VME L L F+ + +F + VLL
Sbjct: 64 GIPTIRWCGAEGDYNVMVME---------LLGPSLEDLFNFCSRKFSLKTVLLLADQMIS 114
Query: 723 ALEYLHMLGVIYRDLKPENILV---REDGHIMLTDFDLS 758
+EY+H I+RD+KP+N L+ ++ + + DF L+
Sbjct: 115 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 7/181 (3%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
KLG G G VY + A+K + + + + + A +EI HP L L
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQL 281
Query: 675 YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
T + ++ E+ G+L ++ + S + ++ A+EYL I+
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCI 794
R+L N LV E+ + + DF LS R T + P + + P ES F I
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAP--ESLAYNKFSI 398
Query: 795 E 795
+
Sbjct: 399 K 399
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 29/175 (16%)
Query: 605 SIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
S+ L + LL+ +G G G VY L A+KV A R+ E+ I R
Sbjct: 9 SLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFS---FANRQNFI---NEKNIYR 60
Query: 665 --MLDHPFLPTLY---SQFTSDNL--SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYV 717
+++H + + T+D LVMEY P G L K L S+ + +
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSL----XKYLSLHTSDWVSSCRL 116
Query: 718 AE-VLLALEYLHML---------GVIYRDLKPENILVREDGHIMLTDFDLSLRCS 762
A V L YLH + +RDL N+LV+ DG +++DF LS+R +
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEF--LARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G G VYLA N AIK ++ F L K++ R T IL L ++ L
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLKSDYIIRL 92
Query: 675 YSQFTSDNLS-----CLVMEYCPGGDLHVLRQKQLGKC---FSEPAARFYVAEVLLALEY 726
+ ++L +V+E DL K+L K +E + + +LL ++
Sbjct: 93 HDLIIPEDLLKFDELYIVLE-IADSDL-----KKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+H G+I+RDLKP N L+ +D + + DF L+
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 160 HELRKLRLIDWGLA 173
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 160 HELRKLRLIDWGLA 173
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 160 HELRKLRLIDWGLA 173
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 714 RFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++++ +LL L LH GV++RDL P NIL+ ++ I + DF+L+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 35/144 (24%)
Query: 834 EPTDARSNSFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
+ DA +V Y APE++ + +G VD W+ G + E+ + F+GS L
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 893 ANVV-------MQSLKFPDSP---------LISFQAR--------------DLIRGLLIK 922
+V ++ + SP L + AR DLI +L
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303
Query: 923 EPENRLGSQKGAAEIKQHPFFEGL 946
P+ R+ +++ +HP+FE L
Sbjct: 304 NPQRRISTEQAL----RHPYFESL 323
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 160 HELRKLRLIDWGLA 173
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF--YVAEV 720
+R DHP + L T +N ++ME C G+L Q + FS A Y ++
Sbjct: 445 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQL 500
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
AL YL ++RD+ N+LV + L DF LS R T K+S P +
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWM 559
Query: 781 GP 782
P
Sbjct: 560 AP 561
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 686 LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV- 744
L+ EY D VL ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVLY-----PTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMID 159
Query: 745 REDGHIMLTDFDLS 758
E + L D+ L+
Sbjct: 160 HELRKLRLIDWGLA 173
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 714 RFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++++ +LL L LH GV++RDL P NIL+ ++ I + DF+L+
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 35/144 (24%)
Query: 834 EPTDARSNSFVGTHEYLAPEII-KGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
+ DA +V Y APE++ + +G VD W+ G + E+ + F+GS L
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQL 243
Query: 893 ANVV-------MQSLKFPDSP---------LISFQAR--------------DLIRGLLIK 922
+V ++ + SP L + AR DLI +L
Sbjct: 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303
Query: 923 EPENRLGSQKGAAEIKQHPFFEGL 946
P+ R+ +++ +HP+FE L
Sbjct: 304 NPQRRISTEQAL----RHPYFESL 323
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++L L++LH V++RDLKP+NILV G I L DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 841 NSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S V T Y APE++ + VD W+ G E+ + F+GS + + L ++
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPF 670
F + + G G GTV L + T AIK + + R +++ Q L +L HP
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD----LAVLHHPN 80
Query: 671 LPTLYSQFTS-------DNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP--AARFYVAEVL 721
+ L S F + D +VMEY P LH + + + P + ++ +++
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 722 LALEYLHM--LGVIYRDLKPENILVRE-DGHIMLTDF 755
++ LH+ + V +RD+KP N+LV E DG + L DF
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 35/137 (25%)
Query: 842 SFVGTHEYLAPEIIKGEGH-GAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV----- 895
+++ + Y APE+I G H AVD W+ G E++ G F+G + L +
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249
Query: 896 -----VMQSLK-------------------FPDSPLI-SFQARDLIRGLLIKEPENRLGS 930
V++ L F D L + +A DL+ LL PE R+
Sbjct: 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309
Query: 931 QKGAAEIKQHPFFEGLN 947
+ HP+F+ L+
Sbjct: 310 YEALC----HPYFDELH 322
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+R DHP + L T +N ++ME C G+L Q + + Y ++
Sbjct: 62 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 119
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
AL YL ++RD+ N+LV + + L DF LS R T K+S P + P
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAP 178
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 84/209 (40%), Gaps = 19/209 (9%)
Query: 587 MSADVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEF 646
MS D +WE R I ++H KLG G G VY + A+K + +
Sbjct: 1 MSLD-KWEMER------TDITMKH-----KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDT 48
Query: 647 LARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGK 706
+ + + A +EI HP L L T + ++ E+ G+L ++ +
Sbjct: 49 MEVEEFLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 104
Query: 707 CFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
S + ++ A+EYL I+RDL N LV E+ + + DF LS R T
Sbjct: 105 EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDT 163
Query: 767 LLKSSSNMDPARVSGPCTESNCIQPFCIE 795
+ P + + P ES F I+
Sbjct: 164 XTAHAGAKFPIKWTAP--ESLAYNKFSIK 190
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 305 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 5/155 (3%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREI 662
IG + LL+KLG G G V E G A+K + + L++ + M E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+ LDH L LY + + +V E P G L +K G +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+ YL I+RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE +K A D W FG+ L+E+ YG+ P+ G + L + + + P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+R DHP + L T +N ++ME C G+L Q + + Y ++
Sbjct: 65 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 122
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
AL YL ++RD+ N+LV + + L DF LS R T K+S P + P
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAP 181
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++L L++LH V++RDLKP+NILV G I L DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 841 NSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S V T Y APE++ + VD W+ G E+ + F+GS + + L ++
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 44.3 bits (103), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 613 LLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLP 672
L+++LG G G V++ + A+K + ++ + + A +++ L H L
Sbjct: 17 LVKRLGAGQFGEVWMG-YYNNSTKVAVKTLKPGTMSVQAFLEEAN----LMKTLQHDKLV 71
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLG 731
LY+ T + ++ EY G L L+ + GK P + A++ + Y+
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIERKN 130
Query: 732 VIYRDLKPENILVREDGHIMLTDFDLS 758
I+RDL+ N+LV E + DF L+
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLA 157
Score = 37.7 bits (86), Expect = 0.031, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
++ APE I D W+FGI LYE++ YG+ P+ G N + + + Q + P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM-TALSQGYRMP 231
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 62/158 (39%), Gaps = 44/158 (27%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------- 896
V T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 897 ---MQSLK---------------------FPD---------SPLISFQARDLIRGLLIKE 923
M+ L+ FPD + L + QARDL+ +L+ +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVID 305
Query: 924 PENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
R+ E QHP+ A PP++PD
Sbjct: 306 ASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 3/120 (2%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
+R DHP + L T +N ++ME C G+L Q + + Y ++
Sbjct: 65 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLST 122
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
AL YL ++RD+ N+LV + + L DF LS R T K+S P + P
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWMAP 181
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 7/181 (3%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
KLG G G VY + A+K + + + + + A +EI HP L L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQL 74
Query: 675 YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
T + +++E+ G+L ++ + S + ++ A+EYL I+
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCI 794
RDL N LV E+ + + DF LS R T + P + + P ES F I
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAP--ESLAYNKFSI 191
Query: 795 E 795
+
Sbjct: 192 K 192
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++L L++LH V++RDLKP+NILV G I L DF L+
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 841 NSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV 896
S V T Y APE++ + VD W+ G E+ + F+GS + + L ++
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 12 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 60
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 61 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 118
Query: 702 KQL--GKCFS---------EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVRED 747
+ G +S + +++ V+ +V +EYL I+RDL N+LV ED
Sbjct: 119 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 178
Query: 748 GHIMLTDFDLS 758
+ + DF L+
Sbjct: 179 NVMKIADFGLA 189
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 82
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 137
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 246 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 306 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 340
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 601 LQYGS--IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
L YGS I + L++LG G G V + G + AIK++ ++ + + A+
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK- 71
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYV 717
++ L H L LY T ++ EY G L + LR+ + F
Sbjct: 72 ---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMC 126
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
+V A+EYL ++RDL N LV + G + ++DF LS R + S + P
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPV 185
Query: 778 RVSGP 782
R S P
Sbjct: 186 RWSPP 190
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 305 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 61 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 109
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 110 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 167
Query: 702 KQL--GKCFS---------EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVRED 747
+ G +S + +++ V+ +V +EYL I+RDL N+LV ED
Sbjct: 168 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 227
Query: 748 GHIMLTDFDLS 758
+ + DF L+
Sbjct: 228 NVMKIADFGLA 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 9 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 57
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 58 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 115
Query: 702 KQL--GKCFS---------EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVRED 747
+ G +S + +++ V+ +V +EYL I+RDL N+LV ED
Sbjct: 116 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 175
Query: 748 GHIMLTDFDLS 758
+ + DF L+
Sbjct: 176 NVMKIADFGLA 186
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Query: 613 LLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLP 672
L++KLG G G V++ + A+K + ++ + + A +++ L H L
Sbjct: 16 LVKKLGAGQFGEVWMG-YYNNSTKVAVKTLKPGTMSVQAFLEEAN----LMKTLQHDKLV 70
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLG 731
LY+ T + ++ E+ G L L+ + GK P + A++ + Y+
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL-PKLIDFSAQIAEGMAYIERKN 129
Query: 732 VIYRDLKPENILVREDGHIMLTDFDLS 758
I+RDL+ N+LV E + DF L+
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLA 156
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + W+FGI LYE++ YG+ P+ G N + ++
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMS 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 13 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 61
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 62 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 119
Query: 702 KQL--GKCFS---------EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVRED 747
+ G +S + +++ V+ +V +EYL I+RDL N+LV ED
Sbjct: 120 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 179
Query: 748 GHIMLTDFDLS 758
+ + DF L+
Sbjct: 180 NVMKIADFGLA 190
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 35/191 (18%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVM 642
D RWE R RL G + LG G G V LAE IG + A+K++
Sbjct: 20 DPRWELPRD-RLVLG----------KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKML 68
Query: 643 DNEFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQ 701
++ A K + +E E+++M+ H + L T D +++EY G+L Q
Sbjct: 69 KSD--ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 702 KQL--GKCFS---------EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVRED 747
+ G +S + +++ V+ +V +EYL I+RDL N+LV ED
Sbjct: 127 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 748 GHIMLTDFDLS 758
+ + DF L+
Sbjct: 187 NVMKIADFGLA 197
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 305 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 28/169 (16%)
Query: 604 GSIGLR---HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTER 660
GS+ LR + L +K+G G G +YL I + AIK+ + K P+ E
Sbjct: 1 GSMELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLE-----CVKTKHPQLHIES 55
Query: 661 EILRMLDHPF-LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
+ +M+ +P++ + + +VME L L F+ + +F +
Sbjct: 56 KFYKMMQGGVGIPSIKWCGAEGDYNVMVME---------LLGPSLEDLFNFCSRKFSLKT 106
Query: 720 VLL-------ALEYLHMLGVIYRDLKPENILV---REDGHIMLTDFDLS 758
VLL +EY+H I+RD+KP+N L+ ++ + + DF L+
Sbjct: 107 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 7 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 55
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + +++E+ G+L ++ + S
Sbjct: 56 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV 111
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSS 771
+ ++ A+EYL I+RDL N LV E+ + + DF LS R T +
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHA 170
Query: 772 SNMDPARVSGPCTESNCIQPFCIE 795
P + + P ES F I+
Sbjct: 171 GAKFPIKWTAP--ESLAYNKFSIK 192
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 686 LVMEYCPGGDLHVLRQ-KQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV 744
++MEY P VL+ + G+ Y+ ++ A+ ++H LG+ +RD+KP+N+LV
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174
Query: 745 R-EDGHIMLTDF 755
+D + L DF
Sbjct: 175 NSKDNTLKLCDF 186
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 32/126 (25%)
Query: 849 YLAPEIIKGEG-HGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV----------- 896
Y APE++ G + ++D W+ G EL+ G+ F G + + L ++
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM 266
Query: 897 ------MQSLKFPDSPLISFQ----------ARDLIRGLLIKEPENRLGSQKGAAEIKQH 940
++FP ++ A DL+ +L EP+ R+ + A H
Sbjct: 267 IRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA----H 322
Query: 941 PFFEGL 946
PFF+ L
Sbjct: 323 PFFDHL 328
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 86
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 87 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 141
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 249
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 250 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 309
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 310 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 344
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF--YVAEV 720
+R DHP + L T +N ++ME C G+L Q + FS A Y ++
Sbjct: 65 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV---RKFSLDLASLILYAYQL 120
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
AL YL ++RD+ N+LV + L DF LS R T K+S P +
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYKASKGKLPIKWM 179
Query: 781 GP 782
P
Sbjct: 180 AP 181
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYE-LLYGRTPFKGSGNEETLANV 895
+++APE I +A D W FG+ ++E L++G PF+G N + + +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 44/158 (27%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------- 896
V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 897 ---MQSLK---------------------FPD---------SPLISFQARDLIRGLLIKE 923
M+ L+ FPD + L + QARDL+ +L+ +
Sbjct: 246 PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 924 PENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
R+ E QHP+ A PP++PD
Sbjct: 306 ASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 7/181 (3%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
KLG G G VY + A+K + + + + + A +EI HP L L
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQL 72
Query: 675 YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIY 734
T + +++E+ G+L ++ + S + ++ A+EYL I+
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 735 RDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCI 794
RDL N LV E+ + + DF LS R T + P + + P ES F I
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKFPIKWTAP--ESLAYNKFSI 189
Query: 795 E 795
+
Sbjct: 190 K 190
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 28/207 (13%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
R LL+ +G G G V+ G N A+K+ F +R +K +TE ML H
Sbjct: 37 RQITLLECVGKGRYGEVWRGSWQGEN--VAVKI----FSSRDEKSWFRETELYNTVMLRH 90
Query: 669 P-FLPTLYSQFTSDNLS---CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L + S TS + S L+ Y G L+ QL + R V + L
Sbjct: 91 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLY--DYLQLTTLDTVSCLRI-VLSIASGL 147
Query: 725 EYLHML--------GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDP 776
+LH+ + +RDLK +NILV+++G + D L++ S S L +N
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN--- 204
Query: 777 ARVSGPCTESNCIQPFCIEPTCQVPCF 803
RV + P ++ T QV CF
Sbjct: 205 PRVG----TKRYMAPEVLDETIQVDCF 227
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 837 DARSNSFVGTHEYLAPEIIKGE------GHGAAVDWWTFGIFLYEL 876
D +N VGT Y+APE++ VD W FG+ L+E+
Sbjct: 200 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 9/182 (4%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
KLG G G VY + A+K + + + + + A +EI HP L L
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQL 320
Query: 675 YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA-EVLLALEYLHMLGVI 733
T + ++ E+ G+L + ++ + Y+A ++ A+EYL I
Sbjct: 321 LGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 379
Query: 734 YRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFC 793
+R+L N LV E+ + + DF LS R T + P + + P ES F
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAP--ESLAYNKFS 436
Query: 794 IE 795
I+
Sbjct: 437 IK 438
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 20/107 (18%)
Query: 845 GTHEYLAPEIIKGEG--HGAAVDWWTFGIFLYELLYGRTPFKGSGN-EETLANVVMQSLK 901
GT+E++ PE E +GA VD W+ GI LY + Y PF + E N+ ++++
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 902 FP-----------------DSPLISFQARDLIRGLLIKEPENRLGSQ 931
+P + +S + D ++ L K P R+ S+
Sbjct: 272 YPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 717 VAEVLLALEYLHM-LGVIYRDLKPENILVREDGHIMLTDF 755
+ VL + Y+H + +RD+KP NIL+ ++G + L+DF
Sbjct: 157 IKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 12 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L ++ + S
Sbjct: 61 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 116
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSS 771
+ ++ A+EYL I+RDL N LV E+ + + DF LS R T +
Sbjct: 117 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHA 175
Query: 772 SNMDPARVSGPCTESNCIQPFCIE 795
P + + P ES F I+
Sbjct: 176 GAKFPIKWTAP--ESLAYNKFSIK 197
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 44/158 (27%)
Query: 844 VGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------- 896
V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 897 ---MQSLK---------------------FPD---------SPLISFQARDLIRGLLIKE 923
M+ L+ FPD + L + QARDL+ +L+ +
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 924 PENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
R+ E QHP+ A PP++PD
Sbjct: 306 ASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARR---------KKMPRAQTERE 661
+ L++KLG G TV+LA+ + N A+K++ + + +++ A +E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 662 -------ILRMLDH-------PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKC 707
IL++LDH + + +NL L+ +Y G + ++ KQ+ K
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG-IPLIYVKQISK- 138
Query: 708 FSEPAARFYVAEVLLALEYLH-MLGVIYRDLKPENILV 744
++LL L+Y+H G+I+ D+KPEN+L+
Sbjct: 139 -----------QLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFK 884
D + + T EY +PE++ G G D W+ ++EL+ G F+
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMP-RAQTEREILRMLD 667
+ L K+G G G V+ A T A+K +M+NE ++ P A E +IL++L
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE----KEGFPITALREIKILQLLK 75
Query: 668 HPFLPTLYS---QFTSDNLSC-----LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
H + L S C LV ++C + L S +F ++E
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFC---------EHDLAGLLSNVLVKFTLSE 126
Query: 720 V-------LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ L L Y+H +++RD+K N+L+ DG + L DF L+
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 37/158 (23%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARR---------KKMPRAQTERE 661
+ L++KLG G TV+LA+ + N A+K++ + + +++ A +E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 662 -------ILRMLDH-------PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKC 707
IL++LDH + + +NL L+ +Y G + ++ KQ+ K
Sbjct: 81 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG-IPLIYVKQISK- 138
Query: 708 FSEPAARFYVAEVLLALEYLH-MLGVIYRDLKPENILV 744
++LL L+Y+H G+I+ D+KPEN+L+
Sbjct: 139 -----------QLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 837 DARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFK 884
D + + T EY +PE++ G G D W+ ++EL+ G F+
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE 236
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 21/212 (9%)
Query: 586 HMSADV-RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDN 644
HMS + +WE R I ++H KLG G G VY + A+K +
Sbjct: 2 HMSPNYDKWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE 50
Query: 645 EFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQL 704
+ + + + A +EI HP L L T + ++ E+ G+L + ++
Sbjct: 51 DTMEVEEFLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLREC 105
Query: 705 GKCFSEPAARFYVA-EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSV 763
+ Y+A ++ A+EYL I+RDL N LV E+ + + DF LS R
Sbjct: 106 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMT 164
Query: 764 SPTLLKSSSNMDPARVSGPCTESNCIQPFCIE 795
T + P + + P ES F I+
Sbjct: 165 GDTYTAPAGAKFPIKWTAP--ESLAYNKFSIK 194
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ G F G+ + + V+
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 245 SPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 305 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 339
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 81
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYLLYQML 136
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 9/182 (4%)
Query: 615 QKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
KLG G G VY + A+K + + + + + A +EI HP L L
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI----KHPNLVQL 278
Query: 675 YSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA-EVLLALEYLHMLGVI 733
T + ++ E+ G+L + ++ + Y+A ++ A+EYL I
Sbjct: 279 LGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 337
Query: 734 YRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFC 793
+R+L N LV E+ + + DF LS R T + P + + P ES F
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIKWTAP--ESLAYNKFS 394
Query: 794 IE 795
I+
Sbjct: 395 IK 396
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 601 LQYGS--IGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
L YGS I + L++LG G G V + G + AIK++ ++ + + A+
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK- 71
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYV 717
++ L H L LY T ++ EY G L + LR+ + F
Sbjct: 72 ---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMC 126
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V A+EYL ++RDL N LV + G + ++DF LS
Sbjct: 127 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ L L++LH +++RDLKPENILV G + L DF L+
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ L L++LH +++RDLKPENILV G + L DF L+
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 7 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 55
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L ++ + S
Sbjct: 56 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 111
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSS 771
+ ++ A+EYL I+RDL N LV E+ + + DF LS R T +
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHA 170
Query: 772 SNMDPARVSGPCTESNCIQPFCIE 795
P + + P ES F I+
Sbjct: 171 GAKFPIKWTAP--ESLAYNKFSIK 192
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 16/174 (9%)
Query: 586 HMSADV-RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDN 644
HMS + +WE ++ I ++H KLG G G VY + A+K +
Sbjct: 2 HMSPNYDKWE------MERTDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE 50
Query: 645 EFLARRKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQL 704
+ + + + A +EI HP L L T + ++ E+ G+L ++
Sbjct: 51 DTMEVEEFLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 106
Query: 705 GKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ + + ++ A+EYL I+RDL N LV E+ + + DF LS
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ L L++LH +++RDLKPENILV G + L DF L+
Sbjct: 120 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 608 LRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLD 667
L+ + L+ +G G G V A AIK + F + RA E +++ ++
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN 75
Query: 668 HPFLPTLYSQFTSDNL------SCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
H + L + FT +VME V++ + + + ++L
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQML 130
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++LH G+I+RDLKP NI+V+ D + + DF L+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 44/159 (27%)
Query: 843 FVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVV------ 896
+V T Y APE+I G G+ VD W+ G + E++ + F G + V+
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 897 ----MQSLK---------------------FPD---------SPLISFQARDLIRGLLIK 922
M+ L+ FPD + L + QARDL+ +L+
Sbjct: 239 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 923 EPENRLGSQKGAAEIKQHPFFEGLNWALIRCAIPPELPD 961
+ R+ E QHP+ A PP++PD
Sbjct: 299 DASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIPD 333
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 7 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 55
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L ++ + S
Sbjct: 56 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV 111
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSS 771
+ ++ A+EYL I+RDL N LV E+ + + DF LS R T +
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHA 170
Query: 772 SNMDPARVSGPCTESNCIQPFCIE 795
P + + P ES F I+
Sbjct: 171 GAKFPIKWTAP--ESLAYNKFSIK 192
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 20/205 (9%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 12 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + +++E+ G+L + ++ +
Sbjct: 61 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIIIEFMTYGNL-LDYLRECNRQEVNA 115
Query: 712 AARFYVA-EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKS 770
Y+A ++ A+EYL I+RDL N LV E+ + + DF LS R T
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAH 174
Query: 771 SSNMDPARVSGPCTESNCIQPFCIE 795
+ P + + P ES F I+
Sbjct: 175 AGAKFPIKWTAP--ESLAYNKFSIK 197
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 11/185 (5%)
Query: 601 LQYGSIGL--RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
L YGS + + L++LG G G V + G + AIK++ ++ + + A+
Sbjct: 5 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK- 62
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGG-DLHVLRQKQLGKCFSEPAARFYV 717
++ L H L LY T ++ EY G L+ LR+ + F
Sbjct: 63 ---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMC 117
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
+V A+EYL ++RDL N LV + G + ++DF LS R + S + P
Sbjct: 118 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPV 176
Query: 778 RVSGP 782
R S P
Sbjct: 177 RWSPP 181
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 28/207 (13%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
R LL+ +G G G V+ G N A+K+ F +R +K +TE ML H
Sbjct: 8 RDITLLECVGKGRYGEVWRGSWQGEN--VAVKI----FSSRDEKSWFRETELYNTVMLRH 61
Query: 669 P-FLPTLYSQFTSDNLS---CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L + S TS + S L+ Y G L+ QL + R V + L
Sbjct: 62 ENILGFIASDMTSRHSSTQLWLITHYHEMGSLY--DYLQLTTLDTVSCLRI-VLSIASGL 118
Query: 725 EYLHML--------GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDP 776
+LH+ + +RDLK +NILV+++G + D L++ S S L +N
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN--- 175
Query: 777 ARVSGPCTESNCIQPFCIEPTCQVPCF 803
RV + P ++ T QV CF
Sbjct: 176 PRVG----TKRYMAPEVLDETIQVDCF 198
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 837 DARSNSFVGTHEYLAPEIIKGE------GHGAAVDWWTFGIFLYEL 876
D +N VGT Y+APE++ VD W FG+ L+E+
Sbjct: 171 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 20/205 (9%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 8 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 56
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + +++E+ G+L + ++ +
Sbjct: 57 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIIIEFMTYGNL-LDYLRECNRQEVNA 111
Query: 712 AARFYVA-EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKS 770
Y+A ++ A+EYL I+RDL N LV E+ + + DF LS R T
Sbjct: 112 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAH 170
Query: 771 SSNMDPARVSGPCTESNCIQPFCIE 795
+ P + + P ES F I+
Sbjct: 171 AGAKFPIKWTAP--ESLAYNKFSIK 193
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + TL T D +++EY G+L ++ ++ G +S R ++
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 641 VMDNEFLARRKKMPR----AQTEREILRMLD-HPFLPTLYSQFTSDNLSCLVMEYCPGGD 695
+ DN +A ++ +P A E ++LR D HP + + + +E C
Sbjct: 45 MFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATL 104
Query: 696 LHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILV---REDGHI-- 750
+ QK EP + + L +LH L +++RDLKP NIL+ G I
Sbjct: 105 QEYVEQKDFAHLGLEPIT--LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKA 162
Query: 751 MLTDFDLSLRCSV 763
M++DF L + +V
Sbjct: 163 MISDFGLCKKLAV 175
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 31/163 (19%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMP-RAQTEREILRMLDHPF 670
L K+G G G V+ A T A+K +M+NE ++ P A E +IL++L H
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE----KEGFPITALREIKILQLLKHEN 78
Query: 671 LPTLY-------SQFTSDNLSC-LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV-- 720
+ L S + S LV ++C + L S +F ++E+
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFC---------EHDLAGLLSNVLVKFTLSEIKR 129
Query: 721 -----LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L L Y+H +++RD+K N+L+ DG + L DF L+
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 22/206 (10%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 12 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSE 710
+ A +EI HP L L T + ++ E+ G+L LR+ +
Sbjct: 61 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--N 114
Query: 711 PAARFYVA-EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLK 769
Y+A ++ A+EYL I+RDL N LV E+ + + DF LS R T
Sbjct: 115 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 173
Query: 770 SSSNMDPARVSGPCTESNCIQPFCIE 795
+ P + + P ES F I+
Sbjct: 174 HAGAKFPIKWTAP--ESLAYNKFSIK 197
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 20/205 (9%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 12 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L + ++ +
Sbjct: 61 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEVNA 115
Query: 712 AARFYVA-EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKS 770
Y+A ++ A+EYL I+RDL N LV E+ + + DF LS R T
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAH 174
Query: 771 SSNMDPARVSGPCTESNCIQPFCIE 795
+ P + + P ES F I+
Sbjct: 175 AGAKFPIKWTAP--ESLAYNKFSIK 197
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRM 665
+ F L + LG G+ G+V A+L G+ A+K++ + +A + E ++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKE 81
Query: 666 LDHPFLPTLYSQFTSDN------LSCLVMEYCPGGDLH-VLRQKQLGKC-FSEPA---AR 714
DHP + L + +++ + GDLH L ++G+ F+ P R
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
F V ++ +EYL I+RDL N ++ ED + + DF LS
Sbjct: 142 FMV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFPDSP 906
++LA E + + D W FG+ ++E++ G+TP+ G N E + N ++ + P
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE-IYNYLIGGNRLKQPP 262
Query: 907 LISFQARDLIRGLLIKEPENR 927
+ DL+ +P+ R
Sbjct: 263 ECMEEVYDLMYQCWSADPKQR 283
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMP-RAQTEREILRMLDHPF 670
L K+G G G V+ A T A+K +M+NE ++ P A E +IL++L H
Sbjct: 23 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE----KEGFPITALREIKILQLLKHEN 78
Query: 671 LPTLYS---QFTSDNLSC-----LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV-- 720
+ L S C LV ++C + L S +F ++E+
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFC---------EHDLAGLLSNVLVKFTLSEIKR 129
Query: 721 -----LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L L Y+H +++RD+K N+L+ DG + L DF L+
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 20/205 (9%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 12 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 60
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L + ++ +
Sbjct: 61 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEVNA 115
Query: 712 AARFYVA-EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKS 770
Y+A ++ A+EYL I+RDL N LV E+ + + DF LS R T
Sbjct: 116 VVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAH 174
Query: 771 SSNMDPARVSGPCTESNCIQPFCIE 795
+ P + + P ES F I+
Sbjct: 175 AGAKFPIKWTAP--ESLAYNKFSIK 197
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 602 QYGSIGLRHFNLLQKLGCGDIGTVY---LAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
QYG I L + LG G G VY G A+K + K+ + +
Sbjct: 18 QYG-IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMS 74
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVL-RQKQLGKCFSEPAARFY 716
E I++ LDHP + L + + ++ME P G+L H L R K K + Y
Sbjct: 75 EAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLY 130
Query: 717 VAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ A+ YL + ++RD+ NILV + L DF LS
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 22/206 (10%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE R I ++H KLG G G VY + A+K + + + +
Sbjct: 8 KWEMER------TDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 56
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSE 710
+ A +EI HP L L T + ++ E+ G+L LR+ +
Sbjct: 57 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--N 110
Query: 711 PAARFYVA-EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLK 769
Y+A ++ A+EYL I+RDL N LV E+ + + DF LS R T
Sbjct: 111 AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 169
Query: 770 SSSNMDPARVSGPCTESNCIQPFCIE 795
+ P + + P ES F I+
Sbjct: 170 PAGAKFPIKWTAP--ESLAYNKFSIK 193
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 602 QYGSIGLRHFNLLQKLGCGDIGTVY---LAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
QYG I L + LG G G VY G A+K + K+ + +
Sbjct: 2 QYG-IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMS 58
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVL-RQKQLGKCFSEPAARFY 716
E I++ LDHP + L + + ++ME P G+L H L R K K + Y
Sbjct: 59 EAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLY 114
Query: 717 VAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ A+ YL + ++RD+ NILV + L DF LS
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 12/162 (7%)
Query: 602 QYGSIGLRHFNLLQKLGCGDIGTVY---LAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
QYG I L + LG G G VY G A+K + K+ + +
Sbjct: 6 QYG-IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMS 62
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVL-RQKQLGKCFSEPAARFY 716
E I++ LDHP + L + + ++ME P G+L H L R K K + Y
Sbjct: 63 EAVIMKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLY 118
Query: 717 VAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ A+ YL + ++RD+ NILV + L DF LS
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 837 DARSNSFVGTHEYLAPEIIK-GEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I+ HG + W+ GI LY+++ G PF+ +EE +
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQ 267
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENRLGSQKGAAEIKQHPFFE 944
V + +S + + LIR L P +R EI+ HP+ +
Sbjct: 268 VFFRQR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 306
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 708 FSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVRED-GHIMLTDFDLSLRCSVSPT 766
E AR + +VL A+ + H GV++RD+K ENIL+ + G + L DF S
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-------SGA 206
Query: 767 LLKSS--SNMDPARVSGP 782
LLK + ++ D RV P
Sbjct: 207 LLKDTVYTDFDGTRVYSP 224
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 31/163 (19%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIK--VMDNEFLARRKKMP-RAQTEREILRMLDHPF 670
L K+G G G V+ A T A+K +M+NE ++ P A E +IL++L H
Sbjct: 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE----KEGFPITALREIKILQLLKHEN 77
Query: 671 LPTLYS---QFTSDNLSC-----LVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEV-- 720
+ L S C LV ++C + L S +F ++E+
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFC---------EHDLAGLLSNVLVKFTLSEIKR 128
Query: 721 -----LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L L Y+H +++RD+K N+L+ DG + L DF L+
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 16/184 (8%)
Query: 599 VRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQT 658
+ LQ I + + +G G G VY G AI+++D E R +
Sbjct: 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIE---RDNEDQLKAF 76
Query: 659 EREIL--RMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEPAARF 715
+RE++ R H + S ++ C G L+ V+R ++ R
Sbjct: 77 KREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQ 134
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMD 775
E++ + YLH G++++DLK +N+ ++G +++TDF L S+S +L++ D
Sbjct: 135 IAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGL---FSIS-GVLQAGRRED 189
Query: 776 PARV 779
R+
Sbjct: 190 KLRI 193
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 11/172 (6%)
Query: 613 LLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLP 672
LL++LG G G V L + G + A+K++ ++ + AQT + L HP L
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSEDEFFQEAQT----MMKLSHPKLV 66
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVA-EVLLALEYLHML 730
Y + + +V EY G L + LR G EP+ + +V + +L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGL---EPSQLLEMCYDVCEGMAFLESH 123
Query: 731 GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
I+RDL N LV D + ++DF ++ R + + S P + S P
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMT-RYVLDDQYVSSVGTKFPVKWSAP 174
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 720 VLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+L+ ++Y+H G+++RDLKP N LV +D + + DF L+
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE ++ I ++H KLG G G VY + A+K + + + +
Sbjct: 7 KWE------MERTDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 55
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L ++ + +
Sbjct: 56 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 111
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ A+EYL I+RDL N LV E+ + + DF LS
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 86/203 (42%), Gaps = 28/203 (13%)
Query: 613 LLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP-FL 671
LL+ +G G G V+ G N A+K+ F +R +K +TE ML H L
Sbjct: 12 LLECVGKGRYGEVWRGSWQGEN--VAVKI----FSSRDEKSWFRETELYNTVMLRHENIL 65
Query: 672 PTLYSQFTSDNLS---CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+ S TS + S L+ Y G L+ QL + R V + L +LH
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSLY--DYLQLTTLDTVSCLRI-VLSIASGLAHLH 122
Query: 729 ML--------GVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVS 780
+ + +RDLK +NILV+++G + D L++ S S L +N RV
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN---PRVG 179
Query: 781 GPCTESNCIQPFCIEPTCQVPCF 803
+ P ++ T QV CF
Sbjct: 180 ----TKRYMAPEVLDETIQVDCF 198
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 837 DARSNSFVGTHEYLAPEIIKGE------GHGAAVDWWTFGIFLYEL 876
D +N VGT Y+APE++ VD W FG+ L+E+
Sbjct: 171 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQ-KQLGKCF------- 708
+E +L+ ++HP + LY + D L++EY G L LR+ +++G +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 709 -----SEPAARF--------YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDF 755
P R + ++ ++YL + +++RDL NILV E + ++DF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDF 194
Query: 756 DLSLRCSVSPTLLKSSSNMDPAR 778
LS + +K S P +
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVK 217
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE ++ I ++H KLG G G VY + A+K + + + +
Sbjct: 7 KWE------MERTDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 55
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L ++ + +
Sbjct: 56 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 111
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ A+EYL I+RDL N LV E+ + + DF LS
Sbjct: 112 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE ++ I ++H KLG G G VY + A+K + + + +
Sbjct: 9 KWE------MERTDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 57
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L ++ + +
Sbjct: 58 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 113
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ A+EYL I+RDL N LV E+ + + DF LS
Sbjct: 114 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ L++LG G G V + G + AIK++ ++ + + A+ ++ L H
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK----VMMNLSH 62
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGG-DLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
L LY T ++ EY G L+ LR+ + F +V A+EYL
Sbjct: 63 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYL 120
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
++RDL N LV + G + ++DF LS R + S + P R S P
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPP 174
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ L++LG G G V + G + AIK++ ++ + + A+ ++ L H
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK----VMMNLSH 63
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGG-DLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
L LY T ++ EY G L+ LR+ + F +V A+EYL
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
++RDL N LV + G + ++DF LS R + S + P R S P
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSRGSKFPVRWSPP 175
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE ++ I ++H KLG G G VY + A+K + + + +
Sbjct: 20 KWE------MERTDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 68
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L ++ + +
Sbjct: 69 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 124
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ A+EYL I+RDL N LV E+ + + DF LS
Sbjct: 125 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 171
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQ-KQLGKCF------- 708
+E +L+ ++HP + LY + D L++EY G L LR+ +++G +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 709 -----SEPAARF--------YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDF 755
P R + ++ ++YL + +++RDL NILV E + ++DF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 756 DLSLRCSVSPTLLKSSSNMDPAR 778
LS + +K S P +
Sbjct: 195 GLSRDVYEEDSYVKRSQGRIPVK 217
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 592 RWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRK 651
+WE ++ I ++H KLG G G VY + A+K + + + +
Sbjct: 11 KWE------MERTDITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE 59
Query: 652 KMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEP 711
+ A +EI HP L L T + ++ E+ G+L ++ + +
Sbjct: 60 FLKEAAVMKEI----KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV 115
Query: 712 AARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++ A+EYL I+RDL N LV E+ + + DF LS
Sbjct: 116 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 162
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQ-KQLGKCF------- 708
+E +L+ ++HP + LY + D L++EY G L LR+ +++G +
Sbjct: 75 SEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR 134
Query: 709 -----SEPAARF--------YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDF 755
P R + ++ ++YL + +++RDL NILV E + ++DF
Sbjct: 135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDF 194
Query: 756 DLSLRCSVSPTLLKSSSNMDPAR 778
LS + +K S P +
Sbjct: 195 GLSRDVYEEDSXVKRSQGRIPVK 217
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + L T D +++EY G+L ++ ++ G +S R ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + L T D +++EY G+L ++ ++ G +S R ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K G+ F+ +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLR 131
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++YL +G ++RDL NIL+ + ++DF LS
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
Score = 32.7 bits (73), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP---D 904
+ APE I +A D W++GI ++E++ YG P+ N++ + V + + P D
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-KAVEEGYRLPSPMD 251
Query: 905 SPLISFQ 911
P +Q
Sbjct: 252 CPAALYQ 258
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 7/170 (4%)
Query: 617 LGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPT 673
+G G+ G V L + AIK + + ++++ E I+ DHP +
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRR--DFLCEASIMGQFDHPNVVH 108
Query: 674 LYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVI 733
L T +V+E+ G L +K G+ F+ + + + YL +G +
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ-FTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 734 YRDLKPENILVREDGHIMLTDFDLSLRCSVSP-TLLKSSSNMDPARVSGP 782
+RDL NILV + ++DF LS P + ++ P R + P
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
Score = 33.9 bits (76), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ APE I+ +A D W++GI ++E++ YG P+ N++ + +
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ L++LG G G V + G + AIK++ ++ + + A+ ++ L H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK----VMMNLSH 58
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
L LY T ++ EY G L + LR+ + F +V A+EYL
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYL 116
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
++RDL N LV + G + ++DF LS R + S + P R S P
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPP 170
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 693 GGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIML 752
G DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + +
Sbjct: 129 GADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 753 TDFDLS 758
DF L+
Sbjct: 186 CDFGLA 191
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 253 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 298
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 24/188 (12%)
Query: 617 LGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREILRML-DH 668
LG G G V +AE +G + A+K++ ++ A K + +E E+++M+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKH 100
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQL-GKCFSEPAARF----------- 715
+ L T D +++EY G+L LR ++ G +S R
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 716 -YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNM 774
++ +EYL I+RDL N+LV E+ + + DF L+ + K+++
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 775 DPARVSGP 782
P + P
Sbjct: 221 LPVKWMAP 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 140
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQL-GKCFSEPAARF----- 715
+M+ H + L T D +++EY G+L LR ++ G +S R
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 716 -------YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ +EYL I+RDL N+LV E+ + + DF L+
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
+ L++LG G G V + G + AIK++ ++ + + A+ ++ L H
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAK----VMMNLSH 63
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGG-DLHVLRQKQLGKCFSEPAARFYVAEVLLALEYL 727
L LY T ++ EY G L+ LR+ + F +V A+EYL
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE--MRHRFQTQQLLEMCKDVCEAMEYL 121
Query: 728 HMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGP 782
++RDL N LV + G + ++DF LS R + S + P R S P
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTSSVGSKFPVRWSPP 175
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLA----ELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
R ++ LG G G V L E T A+K + E + + + E EILR
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEIEILR 78
Query: 665 MLDHPFLPTLYSQFTSD--NLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L H + T D N L+ME+ P G L K K + + Y ++
Sbjct: 79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICK 137
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++YL ++RDL N+LV + + + DF L+
Sbjct: 138 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 173
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 24/217 (11%)
Query: 598 HVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTN-----CLFAIKVMDNEFLARRKK 652
H + I R L ++LG G G V+LAE + L A+K + + LA RK
Sbjct: 4 HSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD 63
Query: 653 MPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLR----------- 700
R E E+L L H + Y + +V EY GDL+ LR
Sbjct: 64 FQR---EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 701 -QKQLGKCFSEPAARFYVA-EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
Q + K + ++A ++ + YL ++RDL N LV + + + DF +S
Sbjct: 121 GQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
Query: 759 LRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPFCIE 795
+ M P R P ES + F E
Sbjct: 181 RDVYSTDYYRVGGHTMLPIRWMPP--ESIMYRKFTTE 215
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 837 DARSNSF--VGTH-----EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGN 888
D S + VG H ++ PE I D W+FG+ L+E+ YG+ P+ N
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
Query: 889 EETLANVVMQSLKFPDSPLISFQARDLIRGLLIKEPENRL 928
E + + Q + + D++ G +EP+ RL
Sbjct: 242 TEVI-ECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRL 280
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 24 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 81
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + L T D +++EY G+L ++ ++ G +S R ++
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + L T D +++EY G+L ++ ++ G +S R ++
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 29 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 86
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + L T D +++EY G+L ++ ++ G +S R ++
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 617 LGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREILRML-DH 668
LG G G V +AE +G + A+K++ ++ A K + +E E+++M+ H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKH 100
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLH----------------VLRQKQLGKCFSEPA 712
+ L T D +++EY G+L + R + F +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 713 ARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSS 772
+ Y ++ +EYL I+RDL N+LV E+ + + DF L+ + K+++
Sbjct: 161 SCTY--QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 773 NMDPARVSGP 782
P + P
Sbjct: 219 GRLPVKWMAP 228
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 24/188 (12%)
Query: 617 LGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREILRML-DH 668
LG G G V +AE +G + A+K++ ++ A K + +E E+++M+ H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKH 89
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQKQL-GKCFSEPAARF----------- 715
+ L T D +++EY G+L LR ++ G +S R
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 716 -YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNM 774
++ +EYL I+RDL N+LV E+ + + DF L+ + K+++
Sbjct: 150 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 209
Query: 775 DPARVSGP 782
P + P
Sbjct: 210 LPVKWMAP 217
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA 191
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 844 VGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKF 902
V T Y APEI + +G+ ++D W+ G L E+L R F G + L N ++ L
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL-NHILGILGS 266
Query: 903 PDSP----LISFQARDLIRGL 919
P +I+ +AR+ ++ L
Sbjct: 267 PSQEDLNCIINMKARNYLQSL 287
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 75
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 133
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 609 RHFNLLQKLGCGDIGTVYLA----ELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
R ++ LG G G V L E T A+K + E + + + E EILR
Sbjct: 9 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEIEILR 66
Query: 665 MLDHPFLPTLYSQFTSD--NLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLL 722
L H + T D N L+ME+ P G L K K + + Y ++
Sbjct: 67 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICK 125
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++YL ++RDL N+LV + + + DF L+
Sbjct: 126 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT 161
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 39.7 bits (91), Expect = 0.008, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMD-NEFLARRKKMPRAQTEREILRMLD------HP 669
LG G GTV+ + AIKV+ N L E+ + HP
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 670 FLPTLYSQFTSDNLSCLVMEY-CPGGDL--HVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
+ L F + LV+E P DL ++ + LG E +R + +V+ A+++
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLG----EGPSRCFFGQVVAAIQH 154
Query: 727 LHMLGVIYRDLKPENILVR-EDGHIMLTDF 755
H GV++RD+K ENIL+ G L DF
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDF 184
Score = 35.4 bits (80), Expect = 0.16, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 837 DARSNSFVGTHEYLAPE-IIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANV 895
D F GT Y PE I + + H W+ GI LY+++ G PF E +
Sbjct: 192 DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF------ERDQEI 245
Query: 896 VMQSLKFPDSPLISFQARDLIRGLLIKEPENR 927
+ L FP +S LIR L +P +R
Sbjct: 246 LEAELHFPAH--VSPDCCALIRRCLAPKPSSR 275
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 17/154 (11%)
Query: 614 LQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREIL-------RML 666
+ +LG G G V + + + A+K R + +Q ++ +L R +
Sbjct: 39 IXELGRGAYGVVEKXRHVPSGQIXAVK--------RIRATVNSQEQKRLLXDLDISXRTV 90
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQK-QLGKCFSEPAARFYVAEVLLALE 725
D PF T Y + + E +Q G+ E ++ ALE
Sbjct: 91 DCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 150
Query: 726 YLH-MLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+LH L VI+RD+KP N+L+ G + DF +S
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 9/174 (5%)
Query: 615 QKLGCGDIGTVYLAELI--GTNCLF-AIKVMDNEFLARRKKMPRAQTEREILRMLDHPFL 671
Q +G G+ G V L G +F AIK + + + ++++ +E I+ DHP +
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR--DFLSEASIMGQFDHPNV 96
Query: 672 PTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLG 731
L T ++ E+ G L ++ G+ F+ + + ++YL +
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMN 155
Query: 732 VIYRDLKPENILVREDGHIMLTDFDLSLRC---SVSPTLLKSSSNMDPARVSGP 782
++RDL NILV + ++DF LS + PT + P R + P
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE I+ +A D W++GI ++E++ YG P+ N++ + N + Q + P
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRLP 260
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 614 LQKLGCGDIGTVYLAELI--GTNCLF--AIKVMDNEFLARRKKMPRAQTE----REILRM 665
++ LG G GTVY I G N AIKV+ R P+A E ++
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVL------RENTSPKANKEILDEAYVMAG 75
Query: 666 LDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
+ P++ L + + LV + P G L ++ G+ S+ + ++ +
Sbjct: 76 VGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLN-WCMQIAKGMS 133
Query: 726 YLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPT 766
YL + +++RDL N+LV+ H+ +TDF L+ + T
Sbjct: 134 YLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 832 VAEPTDARSNSFVGTHEYLAPEIIKGE-GHGAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
+A P + + V T Y APE++ G+ +G AVD W G + E+ G F G + +
Sbjct: 174 LAAPGEVYDDE-VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232
Query: 891 TLANVVM 897
L +++M
Sbjct: 233 QLYHIMM 239
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
Y+ +++ + + H +I+RD+KPENILV + G + L DF +
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFA 171
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 78
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 136
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.011, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A + + +E E++
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEEDLSDLVSEMEMM 94
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + L T D +++EY G+L ++ ++ G +S R ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 76/211 (36%), Gaps = 35/211 (16%)
Query: 609 RHFNLLQKLGCGDIGTVYLAELIGT-----NCLFAIKVMDNEFLARRKKMPRAQTEREIL 663
R L +LG G G V+LAE L A+K + + R+ Q E E+L
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDF---QREAELL 97
Query: 664 RMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQ-------------------L 704
ML H + + T +V EY GDL+ + L
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157
Query: 705 GKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVS 764
G+ + ++V + YL L ++RDL N LV + + + DF +S +
Sbjct: 158 GQLLA------VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 211
Query: 765 PTLLKSSSNMDPARVSGPCTESNCIQPFCIE 795
M P R P ES + F E
Sbjct: 212 DYYRVGGRTMLPIRWMPP--ESILYRKFTTE 240
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
++ PE I D W+FG+ L+E+ YG+ P+ N E + + + Q +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGRELERPRA 284
Query: 908 ISFQARDLIRGLLIKEPENR 927
+ ++RG +EP+ R
Sbjct: 285 CPPEVYAIMRGCWQREPQQR 304
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 135
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 136 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLA 173
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 888 NEETLANVV 896
+ L +++
Sbjct: 235 YLDQLNHIL 243
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 617 LGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLP 672
LG G GTVY + AIK++ NE + + E I+ +DHP L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKIL-NETTGPKANV-EFMDEALIMASMDHPHLV 103
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGV 732
L S + LV + P G L + S+ + V ++ + YL +
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV-QIAKGMMYLEERRL 161
Query: 733 IYRDLKPENILVREDGHIMLTDFDLS 758
++RDL N+LV+ H+ +TDF L+
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 118
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 703 QLGKC--FSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+L KC S +++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 118 KLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 237 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 77
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 135
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 75
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 76 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 133
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 76
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 148 QLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 831 LVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEE 890
L P A VGT Y++PE I G + VD ++ G+ L+ELLY + + E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS----TQMER 279
Query: 891 TLANVVMQSLKFP 903
+++LKFP
Sbjct: 280 VRIITDVRNLKFP 292
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 723 ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
A+E+LH G+++RDLKP NI D + + DF L
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 74
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P+ +I+ +AR+ + L K P NRL
Sbjct: 231 YLDQL-NHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRL 276
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 169
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 237 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.1 bits (74), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 233 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 235 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 280
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 173
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 234
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 235 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 280
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLA 171
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 888 NEETLANVVMQSLKFPD----SPLISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P + +I+ +AR+ + L K P NRL
Sbjct: 233 YLDQL-NHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.019, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + L T D +++ Y G+L ++ ++ G +S R ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 191
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 253 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 298
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L +KLG G G V++A + A+K M FLA E +++
Sbjct: 190 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLA----------EANVMK 238
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L L++ T + + ++ E+ G L + G P + A++ +
Sbjct: 239 TLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 297
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + DF L+
Sbjct: 298 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETL 892
++ APE I D W+FGI L E++ YGR P+ G N E +
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 175
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 237 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L +KLG G G V++A + A+K M FLA E +++
Sbjct: 184 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLA----------EANVMK 232
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L L++ T + + ++ E+ G L + G P + A++ +
Sbjct: 233 TLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 291
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + DF L+
Sbjct: 292 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETL 892
++ APE I D W+FGI L E++ YGR P+ G N E +
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 176
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 178 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 238 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 283
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 177
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 179 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 238
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 239 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 284
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 168
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 170 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 229
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 230 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 275
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 237 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLA 171
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 888 NEETLANVVMQSLKFPD----SPLISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P + +I+ +AR+ + L K P NRL
Sbjct: 233 YLDQL-NHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 237 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARSNSF---VGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 177 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 236
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 237 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 282
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 176
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARSNSF---VGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 178 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 237
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 238 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 283
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 609 RHFNLLQKLGCGDIGTV----YLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
R+ ++ LG G G V Y GT + A+K + + A + + E +ILR
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILR 88
Query: 665 MLDHPFLPTLYSQFTSDNLSC---LVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEV 720
L H + Y D + LVMEY P G L L + +G + ++
Sbjct: 89 TLYHEHI-IKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLA----QLLLFAQQI 143
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ YLH I+RDL N+L+ D + + DF L+
Sbjct: 144 CEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL 877
+ APE +K A D W+FG+ LYELL
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 169
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 230
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 231 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 276
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 171
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 233 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 145
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 146 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIG----TNCLFAIKVMDNEFLARRKKMPRAQTERE 661
I + + + + +G G+ G V L +C+ AIK + + R+++ +E
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTERQRR--EFLSEAS 67
Query: 662 ILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
I+ +HP + L T+ ++ E+ G L + G+ F+ + +
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIA 126
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRC---SVSPTLLKSSSNMDPAR 778
+ YL + ++RDL NILV + ++DF LS S PT S P R
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR 186
Query: 779 VSGP 782
+ P
Sbjct: 187 WTAP 190
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFPDSP 906
+ APE I +A D W++GI ++E++ +G P+ N++ + N + Q + P P
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI-NAIEQDYRLPPPP 244
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 179
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 181 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 240
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 241 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 286
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 715 FYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 171
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 832 VAEPTDARS---NSFVGTHEYLAPEI-IKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSG 887
VA+P + +V T Y APEI + +G+ ++D W+ G L E+L R F G
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 232
Query: 888 NEETLANVVMQSLKFPDSP----LISFQARDLIRGLLIKE--PENRL 928
+ L N ++ L P +I+ +AR+ + L K P NRL
Sbjct: 233 YLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRL 278
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%)
Query: 813 KTRKPKADPAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIF 872
K R ++ + +R + A ++ V T Y APE+I G D W+ G
Sbjct: 183 KKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCI 242
Query: 873 LYELLYGRTPFKGSGNEETLA 893
++E G T F+ N E LA
Sbjct: 243 IFEYYVGFTLFQTHDNREHLA 263
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 113/301 (37%), Gaps = 60/301 (19%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML---- 666
+++++KLG G TV+L+ I A+KV+ + +T + +R+L
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV-------KSAEHYTETALDEIRLLKSVR 91
Query: 667 -------DHPFLPTLYSQFTSDNLS----CLVMEYCPGGDLHVLRQ--KQLGKCFSEPAA 713
+ + L F ++ C+V E H+L+ K + P
Sbjct: 92 NSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH---HLLKWIIKSNYQGLPLPCV 148
Query: 714 RFYVAEVLLALEYLHM-LGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSS 772
+ + +VL L+YLH +I+ D+KPENIL+ + + R + T + S
Sbjct: 149 KKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI-------RRLAAEATEWQRSG 201
Query: 773 NMDP---ARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLP 829
P A + P T N F + P P A+ K K +
Sbjct: 202 APPPSGSAVSTAPATAGN----FLVNP----------LEPKNAEKLKVKIADLGNACWVH 247
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNE 889
+ E + T +Y + E++ G G+ D W+ +EL G F+ E
Sbjct: 248 KHFTED--------IQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGE 299
Query: 890 E 890
E
Sbjct: 300 E 300
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L +KLG G G V++A + A+K M FLA E +++
Sbjct: 17 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKPGSMSVEAFLA----------EANVMK 65
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L L++ T + + ++ E+ G L + G P + A++ +
Sbjct: 66 TLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM 124
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + DF L+
Sbjct: 125 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 158
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETL 892
++ APE I D W+FGI L E++ YGR P+ G N E +
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 38.1 bits (87), Expect = 0.027, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Query: 609 RHFNLLQKLGCGDIGTV----YLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
R+ ++ LG G G V Y GT + A+K + + + Q E EILR
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRS--GWQREIEILR 65
Query: 665 MLDHPFLPTLYSQFTSDNLS---CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
L H + Y D LVMEY P G L R C + ++
Sbjct: 66 TLYHEHI-VKYKGCCEDQGEKSVQLVMEYVPLGSL---RDYLPRHCVGLAQLLLFAQQIC 121
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ YLH I+R L N+L+ D + + DF L+
Sbjct: 122 EGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.027, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 62/157 (39%), Gaps = 13/157 (8%)
Query: 609 RHFNLLQKLGCGDIGTV----YLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
R+ ++ LG G G V Y GT + A+K + + + Q E EILR
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRS--GWQREIEILR 66
Query: 665 MLDHPFLPTLYSQFTSDNLS---CLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVL 721
L H + Y D LVMEY P G L R C + ++
Sbjct: 67 TLYHEHI-VKYKGCCEDQGEKSVQLVMEYVPLGSL---RDYLPRHCVGLAQLLLFAQQIC 122
Query: 722 LALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ YLH I+R L N+L+ D + + DF L+
Sbjct: 123 EGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLA----------EANLMK 71
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 72 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 130
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 131 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 164
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.028, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTN-------CLFAIKVMDNEFLARRKKMPRAQTEREIL 663
L + LG G G V +AE +G + A+K++ ++ A K + +E E++
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 664 RML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVLRQKQLGKCFSEPAARFYVAEV 720
+M+ H + L T D +++ Y G+L ++ ++ G +S R ++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 721 LL------------ALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+EYL I+RDL N+LV E+ + + DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG----KCFSEPAARFYVAEVLL 722
DHP + Y T+D + +E C ++ K + K E + ++
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 723 ALEYLHMLGVIYRDLKPENILVR-------------EDGHIMLTDFDLSLRCSVSPTLLK 769
+ +LH L +I+RDLKP+NILV E+ I+++DF L + +
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 770 SSSNMDPARVSG 781
+ N +P+ SG
Sbjct: 205 XNLN-NPSGTSG 215
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 14/196 (7%)
Query: 594 EAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIG----TNCLFAIKVMDNEFLAR 649
EA+R + I + + + + +G G+ G V L +C+ AIK + + R
Sbjct: 4 EAVREFAKE---IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTER 59
Query: 650 RKKMPRAQTEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFS 709
+++ +E I+ +HP + L T+ ++ E+ G L + G+ F+
Sbjct: 60 QRR--EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FT 116
Query: 710 EPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSL---RCSVSPT 766
+ + + YL + ++RDL NILV + ++DF LS S PT
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 767 LLKSSSNMDPARVSGP 782
S P R + P
Sbjct: 177 ETSSLGGKIPIRWTAP 192
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 826 RSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFK 884
R L + ++PT+ S + APE I +A D W++GI ++E++ +G P+
Sbjct: 166 RFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 225
Query: 885 GSGNEETLANVVMQSLKFPDSP 906
N++ + N + Q + P P
Sbjct: 226 DMSNQDVI-NAIEQDYRLPPPP 246
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLA----------EANLMK 69
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 70 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 129 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 27/61 (44%)
Query: 833 AEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
A D ++ V T Y APE+I G D W+ G L E G T F ++E L
Sbjct: 184 ATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 893 A 893
A
Sbjct: 244 A 244
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 18/132 (13%)
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG----KCFSEPAARFYVAEVLL 722
DHP + Y T+D + +E C ++ K + K E + ++
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 723 ALEYLHMLGVIYRDLKPENILVR-------------EDGHIMLTDFDLSLRCSVSPTLLK 769
+ +LH L +I+RDLKP+NILV E+ I+++DF L + +
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 204
Query: 770 SSSNMDPARVSG 781
+ N +P+ SG
Sbjct: 205 XNLN-NPSGTSG 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 617 LGCGDIGTVYLAELI----GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLP 672
LG G GTVY + AIK++ NE + + E I+ +DHP L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKIL-NETTGPKANV-EFMDEALIMASMDHPHLV 80
Query: 673 TLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLGV 732
L S + LV + P G L + S+ + V ++ + YL +
Sbjct: 81 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV-QIAKGMMYLEERRL 138
Query: 733 IYRDLKPENILVREDGHIMLTDFDLS 758
++RDL N+LV+ H+ +TDF L+
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLA----------EANLMK 73
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 74 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 132
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 133 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 166
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF L+
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Score = 33.1 bits (74), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFP 903
+ APE I+ +A D W++GI ++E++ YG P+ N++ + N + Q + P
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRLP 234
Score = 36.6 bits (83), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 615 QKLGCGDIGTVYLAELI--GTNCLF-AIKVMDNEFLARRKKMPRAQTEREILRMLDHPFL 671
Q +G G+ G V L G +F AIK + + + ++++ +E I+ DHP +
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR--DFLSEASIMGQFDHPNV 70
Query: 672 PTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHMLG 731
L T ++ E+ G L ++ G+ F+ + + ++YL +
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKYLADMN 129
Query: 732 VIYRDLKPENILVREDGHIMLTDFDLS 758
++R L NILV + ++DF LS
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLS 156
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 76
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDF 755
L +++RDL N+LV+ H+ +TDF
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG----KCFSEPAARFYVAEVLL 722
DHP + Y T+D + +E C ++ K + K E + ++
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 723 ALEYLHMLGVIYRDLKPENILVR-------------EDGHIMLTDFDLSLRCSVSPTLLK 769
+ +LH L +I+RDLKP+NILV E+ I+++DF L + + +
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFR 186
Query: 770 SSSNMDPARVSG-----PCTESNCIQ 790
++ N +P+ SG ESN +Q
Sbjct: 187 TNLN-NPSGTSGWRAPELLEESNNLQ 211
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 76
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDF 755
L +++RDL N+LV+ H+ +TDF
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 33/177 (18%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIG-----TNCLFAIKVMDNEFLARRKKMPRAQTER 660
I R L +LG G G V+LAE L A+K + + R+ R E
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EA 71
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQ----------------- 703
E+L ML H + + T +V EY GDL+ +
Sbjct: 72 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 704 --LGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
LG+ + ++V + YL L ++RDL N LV + + + DF +S
Sbjct: 132 LGLGQLLA------VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
++ PE I D W+FG+ L+E+ YG+ P+ N E + + + Q +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGRELERPRA 261
Query: 908 ISFQARDLIRGLLIKEPENR 927
+ ++RG +EP+ R
Sbjct: 262 CPPEVYAIMRGCWQREPQQR 281
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 67/177 (37%), Gaps = 33/177 (18%)
Query: 606 IGLRHFNLLQKLGCGDIGTVYLAELIG-----TNCLFAIKVMDNEFLARRKKMPRAQTER 660
I R L +LG G G V+LAE L A+K + + R+ R E
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EA 65
Query: 661 EILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQ----------------- 703
E+L ML H + + T +V EY GDL+ +
Sbjct: 66 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 704 --LGKCFSEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
LG+ + ++V + YL L ++RDL N LV + + + DF +S
Sbjct: 126 LGLGQLLA------VASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLKFPDSPL 907
++ PE I D W+FG+ L+E+ YG+ P+ N E + + + Q +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGRELERPRA 255
Query: 908 ISFQARDLIRGLLIKEPENR 927
+ ++RG +EP+ R
Sbjct: 256 CPPEVYAIMRGCWQREPQQR 275
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 112/301 (37%), Gaps = 60/301 (19%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRML---- 666
+++++KLG G TV+L+ I A+KV+ + +T + +R+L
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV-------KSAEHYTETALDEIRLLKSVR 75
Query: 667 -------DHPFLPTLYSQFTSDNLS----CLVMEYCPGGDLHVLRQ--KQLGKCFSEPAA 713
+ + L F ++ C+V E H+L+ K + P
Sbjct: 76 NSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH---HLLKWIIKSNYQGLPLPCV 132
Query: 714 RFYVAEVLLALEYLHM-LGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSS 772
+ + +VL L+YLH +I+ D+KPENIL+ + + R + T + S
Sbjct: 133 KKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI-------RRLAAEATEWQRSG 185
Query: 773 NMDP---ARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKPKADPAAQIRSLP 829
P A + P T N F + P P A+ K K +
Sbjct: 186 APPPSGSAVSTAPATAGN----FLVNP----------LEPKNAEKLKVKIADLGNACWVH 231
Query: 830 QLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNE 889
+ E R +Y + E++ G G+ D W+ +EL G F+ E
Sbjct: 232 KHFTEDIQTR--------QYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGE 283
Query: 890 E 890
E
Sbjct: 284 E 284
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH- 668
H+ + +++G G G ++ + N AIK F RR P+ + E ++L
Sbjct: 10 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-----FEPRRSDAPQLRDEYRTYKLLAGC 64
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+P +Y F + L +++ G L L G+ FS ++L ++ +H
Sbjct: 65 TGIPNVYY-FGQEGLHNVLVIDLLGPSLEDLLD-LCGRKFSVKTVAMAAKQMLARVQSIH 122
Query: 729 MLGVIYRDLKPENILV-----REDGHIMLTDFDL 757
++YRD+KP+N L+ + I + DF +
Sbjct: 123 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 156
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 23/146 (15%)
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLG----KCFSEPAARFYVAEVLL 722
DHP + Y T+D + +E C ++ K + K E + ++
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 723 ALEYLHMLGVIYRDLKPENILVR-------------EDGHIMLTDFDLSLRCSVSPTLLK 769
+ +LH L +I+RDLKP+NILV E+ I+++DF L + +
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFR 186
Query: 770 SSSNMDPARVSG-----PCTESNCIQ 790
+ N +P+ SG ESN +Q
Sbjct: 187 XNLN-NPSGTSGWRAPELLEESNNLQ 211
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 13/154 (8%)
Query: 610 HFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH- 668
H+ + +++G G G ++ + N AIK F RR P+ + E ++L
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-----FEPRRSDAPQLRDEYRTYKLLAGC 65
Query: 669 PFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLH 728
+P +Y F + L +++ G L L G+ FS ++L ++ +H
Sbjct: 66 TGIPNVYY-FGQEGLHNVLVIDLLGPSLEDLLD-LCGRKFSVKTVAMAAKQMLARVQSIH 123
Query: 729 MLGVIYRDLKPENILV-----REDGHIMLTDFDL 757
++YRD+KP+N L+ + I + DF +
Sbjct: 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 15/106 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V EY G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDL 757
+++ L +YL +G ++RDL NIL+ + ++DF L
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLA----------EANLMK 69
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 70 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 128
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 129 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 34.7 bits (78), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYV 717
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELV 476
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMD-P 776
+V + ++YL ++RDL N+L+ + ++DF LS K+ ++ P
Sbjct: 477 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 536
Query: 777 ARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKP 817
+ P CI + V F A + +KP
Sbjct: 537 VKWYAP----ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 584
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAFLA----------EANLMK 72
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 73 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 131
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 132 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 165
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLA----------EANLMK 63
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 8/149 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 78
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 79 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 136
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDF 755
L +++RDL N+LV+ H+ +TDF
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYV 717
+E I+ DHP + L T ++ EY G L +K G+ F+ +
Sbjct: 79 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGML 137
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++YL + ++RDL NILV + ++DF +S
Sbjct: 138 RGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ APE I +A D W++GI ++E++ YG P+ N++ + +
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYV 717
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELV 475
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMD-P 776
+V + ++YL ++RDL N+L+ + ++DF LS K+ ++ P
Sbjct: 476 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP 535
Query: 777 ARVSGPCTESNCIQPFCIEPTCQVPCFSPRFLPATAKTRKP 817
+ P CI + V F A + +KP
Sbjct: 536 VKWYAP----ECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 583
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 74
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLA----------EANLMK 68
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 69 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 127
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 128 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 161
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 74/191 (38%), Gaps = 20/191 (10%)
Query: 609 RHFNLLQK-LGCGDIGTVYLAELIGT-----NCLFAIKVMDNEFLARRKKMPRAQTEREI 662
RH +L++ LG G G V+LAE L A+K + + RK R E E+
Sbjct: 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR---EAEL 68
Query: 663 LRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLH-VLRQKQLGKCFSEP---------A 712
L L H + Y + +V EY GDL+ LR +
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 713 ARFYVAEVLLA-LEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSS 771
++A+ + A + YL ++RDL N LV E+ + + DF +S +
Sbjct: 129 QMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGG 188
Query: 772 SNMDPARVSGP 782
M P R P
Sbjct: 189 HTMLPIRWMPP 199
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYV 717
+E I+ DHP + L T ++ EY G L +K G+ F+ +
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGML 122
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++YL + ++RDL NILV + ++DF +S
Sbjct: 123 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ APE I +A D W++GI ++E++ YG P+ N++ + +
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 37.0 bits (84), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLA----------EANLMK 65
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 66 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 124
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 125 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 158
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAFLA----------EANLMK 64
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 65 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 123
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 124 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 157
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 80
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 81 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 138
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 658 TEREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYV 717
+E I+ DHP + L T ++ EY G L +K G+ F+ +
Sbjct: 58 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGML 116
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ ++YL + ++RDL NILV + ++DF +S
Sbjct: 117 RGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ APE I +A D W++GI ++E++ YG P+ N++ + +
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNG-HTKVAVKSLKQGSMSPDAFLA----------EANLMK 63
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 81
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 139
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 36.6 bits (83), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAFLA----------EANLMK 63
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 36.6 bits (83), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 76
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 77
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 135
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ L G GTVY I I V E R P+A E ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 81
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+M+ P G L ++ S+ + V ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 139
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 845 GTHEYLAPEIIK----GEGHGAAVDWWTFGIFLYELLYGRTPF-KGSGNEETLANVV 896
G Y+APE I +G+ D W+ GI LYEL GR P+ K + + L VV
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV 243
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 730 LGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +I+RD+KP NIL+ G+I L DF +S
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAFLA----------EANLMK 63
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 64 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 122
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 77
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 135
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 77
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 78 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 135
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 99
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 100 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 157
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 849 YLAPEIIKG---EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDS 905
++APE ++ + + + D W+F + L+EL+ PF N E V ++ L+
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP 233
Query: 906 PLISFQARDLIRGLLIKEPENR 927
P IS L++ + ++P R
Sbjct: 234 PGISPHVSKLMKICMNEDPAKR 255
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 28/162 (17%)
Query: 611 FNLLQKLGCGDIGTVYLAELI--GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDH 668
F ++ LG G GTVY I G + +M+ R P+A E
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIME----LREATSPKANKE--------- 97
Query: 669 PFLPTLYSQFTSDN-LSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARF-----------Y 716
L Y + DN C ++ C + ++ Q C + +
Sbjct: 98 -ILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 156
Query: 717 VAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ + YL +++RDL N+LV+ H+ +TDF L+
Sbjct: 157 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 74
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 84
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 85 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 142
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAFLA----------EANLMK 58
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 59 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 117
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+RDL+ NILV + + DF L+
Sbjct: 118 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLA 151
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 74
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP------F 670
+G G G V A AIK++ N ++ + +AQ E +L +++ +
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLLELMNKHDTEMKYY 98
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM- 729
+ L F N CLV E +LR + S R + ++ AL +L
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP 157
Query: 730 -LGVIYRDLKPENILV 744
L +I+ DLKPENIL+
Sbjct: 158 ELSIIHCDLKPENILL 173
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPLI 908
Y +PE++ G + A+D W+ G L E+ G F G+ NE N +++ L P + ++
Sbjct: 205 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVEVLGIPPAHIL 263
Query: 909 S 909
Sbjct: 264 D 264
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V E G L +K A+F V
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--------DAQFTVI 118
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 119 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 33.5 bits (75), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVL----------RQKQLGKCFSEPAARF 715
HP L +L N L+ +Y G+L H+ +++L C AAR
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG--AAR- 150
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L YLH +I+RD+K NIL+ E+ +TDF +S
Sbjct: 151 -------GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V E G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 148 QLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 71
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 72 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAEGMNY 129
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 50/149 (33%)
Query: 842 SFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
+ V T Y PE+I G D W+ G L+E G T F+ N E L V+M+ +
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL--VMMEKIL 264
Query: 902 FPD-----------------------------------SPLISF---------QARDLIR 917
P PL S+ Q DL+R
Sbjct: 265 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMR 324
Query: 918 GLLIKEPENRLGSQKGAAEIKQHPFFEGL 946
+L +P R+ AE HPFF GL
Sbjct: 325 RMLEFDPAQRI----TLAEALLHPFFAGL 349
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 667 DHPFLPTLYSQ-FTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
++ FL L S F C+ E L++ + + P R ++ AL
Sbjct: 88 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALR 146
Query: 726 YLHMLGVIYRDLKPENILV 744
+LH + + DLKPENIL
Sbjct: 147 FLHENQLTHTDLKPENILF 165
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 617 LGCGDIGTVYLAELI--GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G+ G V A + G AIK M E+ ++ A + ++ HP + L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 675 YSQFTSDNLSCLVMEYCPGGDL-HVLRQKQL-------------GKCFSEPAARFYVAEV 720
L +EY P G+L LR+ ++ S + A+V
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++YL I+RDL NILV E+ + DF LS
Sbjct: 142 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 22/103 (21%)
Query: 668 HPFLPTLYSQFTSDNLSCLVMEYCPGGDL--HVL----------RQKQLGKCFSEPAARF 715
HP L +L N L+ +Y G+L H+ +++L C AAR
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG--AAR- 150
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L YLH +I+RD+K NIL+ E+ +TDF +S
Sbjct: 151 -------GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 50/149 (33%)
Query: 842 SFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
+ V T Y PE+I G D W+ G L+E G T F+ N E L V+M+ +
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL--VMMEKIL 287
Query: 902 FPD-----------------------------------SPLISF---------QARDLIR 917
P PL S+ Q DL+R
Sbjct: 288 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMR 347
Query: 918 GLLIKEPENRLGSQKGAAEIKQHPFFEGL 946
+L +P R+ AE HPFF GL
Sbjct: 348 RMLEFDPAQRI----TLAEALLHPFFAGL 372
Score = 30.4 bits (67), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 667 DHPFLPTLYSQ-FTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
++ FL L S F C+ E L++ + + P R ++ AL
Sbjct: 111 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALR 169
Query: 726 YLHMLGVIYRDLKPENILV 744
+LH + + DLKPENIL
Sbjct: 170 FLHENQLTHTDLKPENILF 188
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP------F 670
+G G G V A AIK++ N ++ + +AQ E +L +++ +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLLELMNKHDTEMKYY 117
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM- 729
+ L F N CLV E +LR + S R + ++ AL +L
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP 176
Query: 730 -LGVIYRDLKPENILV 744
L +I+ DLKPENIL+
Sbjct: 177 ELSIIHCDLKPENILL 192
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPLI 908
Y +PE++ G + A+D W+ G L E+ G F G+ NE N +++ L P + ++
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVEVLGIPPAHIL 282
Query: 909 S 909
Sbjct: 283 D 283
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 50/149 (33%)
Query: 842 SFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLK 901
+ V T Y PE+I G D W+ G L+E G T F+ N E L V+M+ +
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL--VMMEKIL 255
Query: 902 FPD-----------------------------------SPLISF---------QARDLIR 917
P PL S+ Q DL+R
Sbjct: 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMR 315
Query: 918 GLLIKEPENRLGSQKGAAEIKQHPFFEGL 946
+L +P R+ AE HPFF GL
Sbjct: 316 RMLEFDPAQRI----TLAEALLHPFFAGL 340
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 667 DHPFLPTLYSQ-FTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALE 725
++ FL L S F C+ E L++ + + P R ++ AL
Sbjct: 79 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALR 137
Query: 726 YLHMLGVIYRDLKPENILV 744
+LH + + DLKPENIL
Sbjct: 138 FLHENQLTHTDLKPENILF 156
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 617 LGCGDIGTVYLAELI--GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G+ G V A + G AIK M E+ ++ A + ++ HP + L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 675 YSQFTSDNLSCLVMEYCPGGDL-HVLRQKQL-------------GKCFSEPAARFYVAEV 720
L +EY P G+L LR+ ++ S + A+V
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++YL I+RDL NILV E+ + DF LS
Sbjct: 152 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 26/61 (42%)
Query: 833 AEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETL 892
A D ++ V Y APE+I G D W+ G L E G T F ++E L
Sbjct: 184 ATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 893 A 893
A
Sbjct: 244 A 244
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 68
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 69 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 126
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 35.4 bits (80), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHP------F 670
+G G G V A AIK++ N ++ + +AQ E +L +++ +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEVRLLELMNKHDTEMKYY 117
Query: 671 LPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEYLHM- 729
+ L F N CLV E +LR + S R + ++ AL +L
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATP 176
Query: 730 -LGVIYRDLKPENILV 744
L +I+ DLKPENIL+
Sbjct: 177 ELSIIHCDLKPENILL 192
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDSPLI 908
Y +PE++ G + A+D W+ G L E+ G F G+ NE N +++ L P + ++
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA-NEVDQMNKIVEVLGIPPAHIL 282
Query: 909 S 909
Sbjct: 283 D 283
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVV 896
++APE +K + D W+FG+ L+E+ P++G NE+ L V+
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 243
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
AE+ + YL+ ++RDL N +V D + + DF ++ + K + P
Sbjct: 134 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 193
Query: 778 RVSGP 782
R P
Sbjct: 194 RWMAP 198
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVV 896
++APE +K + D W+FG+ L+E+ P++G NE+ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
AE+ + YL+ ++RDL N +V D + + DF ++ + K + P
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 778 RVSGP 782
R P
Sbjct: 197 RWMAP 201
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 15/107 (14%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E I+ DHP + L T +V E G L +K A+F V
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH--------DAQFTVI 147
Query: 719 EVLLAL-------EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+++ L +YL +G ++RDL NIL+ + ++DF LS
Sbjct: 148 QLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ +PE I +A D W++GI L+E++ YG P+ N++ + V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVV 896
++APE +K + D W+FG+ L+E+ P++G NE+ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
AE+ + YL+ ++RDL N +V D + + DF ++ + K + P
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV 196
Query: 778 RVSGP 782
R P
Sbjct: 197 RWMAP 201
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 76
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 77 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 134
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDF 755
L +++RDL N+LV+ H+ +TDF
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVV 896
++APE +K + D W+FG+ L+E+ P++G NE+ L V+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 245
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
AE+ + YL+ ++RDL N +V D + + DF ++ + K + P
Sbjct: 136 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 778 RVSGP 782
R P
Sbjct: 196 RWMAP 200
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 23/192 (11%)
Query: 617 LGCGDIGTVYLAEL-----IGTN--CLFAIKVMDNE-FLARRKKMPRAQTEREI-----L 663
+G G G +YLA++ +G++ C+ ++ DN K RA +I
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 664 RMLDHPFLPTLYSQFTSD----NLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
R L + +P + D + ++M+ G DL + + K FS
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLR 160
Query: 720 VLLALEYLHMLGVIYRDLKPENILV--REDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
+L LEY+H ++ D+K N+L+ + + L D+ L+ R P + + DP
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR--YCPEGVHKAYAADPK 218
Query: 778 RVSGPCTESNCI 789
R E I
Sbjct: 219 RCHDGTIEFTSI 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 219
Score = 33.1 bits (74), Expect = 0.69, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 112
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V + ++YL ++RDL N+L+ + ++DF LS
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 152
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231
Score = 33.1 bits (74), Expect = 0.69, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 124
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V + ++YL ++RDL N+L+ + ++DF LS
Sbjct: 125 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 164
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Score = 33.1 bits (74), Expect = 0.69, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 134
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V + ++YL ++RDL N+L+ + ++DF LS
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 241
Score = 33.1 bits (74), Expect = 0.69, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 134
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V + ++YL ++RDL N+L+ + ++DF LS
Sbjct: 135 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 174
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 221
Score = 33.1 bits (74), Expect = 0.69, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 114
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V + ++YL ++RDL N+L+ + ++DF LS
Sbjct: 115 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 154
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Score = 33.1 bits (74), Expect = 0.69, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 118
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V + ++YL ++RDL N+L+ + ++DF LS
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 225
Score = 33.1 bits (74), Expect = 0.69, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 118
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V + ++YL ++RDL N+L+ + ++DF LS
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
+ APE I +A D W+FGI ++E++ YG P+ N E + +
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI 263
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 16/175 (9%)
Query: 617 LGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYS 676
+G G+ G VY L ++ E K + TE++ + L + +S
Sbjct: 52 IGAGEFGEVYKGMLKTSSG-------KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 104
Query: 677 QFTSDNLSCLVMEYCPGGDL-HVLRQKQLGKCFSEPAARFYVAEVL-------LALEYLH 728
L ++ +Y P + + L K E F V +++ ++YL
Sbjct: 105 HHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA 164
Query: 729 MLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSP-TLLKSSSNMDPARVSGP 782
+ ++RDL NILV + ++DF LS P +S P R + P
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 81
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 139
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDF 755
L +++RDL N+LV+ H+ +TDF
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVV 896
++APE +K + D W+FG+ L+E+ P++G NE+ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
AE+ + YL+ ++RDL N +V D + + DF ++ + K + P
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 196
Query: 778 RVSGP 782
R P
Sbjct: 197 RWMAP 201
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVV 896
++APE +K + D W+FG+ L+E+ P++G NE+ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 718 AEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
AE+ + YL+ ++RDL N +V D + + DF ++ + K + P
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV 196
Query: 778 RVSGP 782
R P
Sbjct: 197 RWMAP 201
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.0 bits (79), Expect = 0.23, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLA 893
++ APE I + D W+FG+ ++E YG+ P++G E A
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 239
Score = 33.1 bits (74), Expect = 0.76, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 659 EREILRMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVA 718
E +++ LD+P++ + +++ LVME G L+ Q+ + + V
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQN--RHVKDKNIIELVH 132
Query: 719 EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+V + ++YL ++RDL N+L+ + ++DF LS
Sbjct: 133 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 172
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVV 896
++APE +K + D W+FG+ L+E+ P++G NE+ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 609 RHFNLLQK-LGCGDIGTVY---LAELIGTNCLFAIKVM--DNEFLARRKKMPRAQTEREI 662
R+ +L K LG G+ G+V L + GT+ A+K M DN + ++++ +E
Sbjct: 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN---SSQREIEEFLSEAAC 89
Query: 663 LRMLDHPFLPTLYS---QFTSDNLS--CLVMEYCPGGDLHVL----RQKQLGKCFSEPAA 713
++ HP + L + +S + +++ + GDLH R + K
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 714 RFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ ++ L +EYL ++RDL N ++R+D + + DF LS
Sbjct: 150 LKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 34.7 bits (78), Expect = 0.25, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 609 RHFNLLQKLGCGDIGTV----YLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTEREILR 664
R+ ++ LG G G V Y GT + A+K + + + + + E +ILR
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRS--GWKQEIDILR 71
Query: 665 MLDHPFLPTLYSQFTSDNLS---CLVMEYCPGGDLH-VLRQKQLGKCFSEPAARFYVAEV 720
L H + Y D LVMEY P G L L + +G + ++
Sbjct: 72 TLYHEHI-IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLA----QLLLFAQQI 126
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
+ YLH I+R+L N+L+ D + + DF L+
Sbjct: 127 CEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
Score = 30.8 bits (68), Expect = 4.1, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL 877
+ APE +K A D W+FG+ LYELL
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 23/192 (11%)
Query: 617 LGCGDIGTVYLAEL-----IGTN--CLFAIKVMDNE-FLARRKKMPRAQTEREI-----L 663
+G G G +YLA++ +G++ C+ ++ DN K RA +I
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 664 RMLDHPFLPTLYSQFTSD----NLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
R L + +P + D + ++M+ G DL + + K FS
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLR 160
Query: 720 VLLALEYLHMLGVIYRDLKPENILV--REDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
+L LEY+H ++ D+K N+L+ + + L D+ L+ R P + DP
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR--YCPEGVHKEYKEDPK 218
Query: 778 RVSGPCTESNCI 789
R E I
Sbjct: 219 RCHDGTIEFTSI 230
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 18/154 (11%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMD------NEFLARRKKMPRAQTEREILR 664
L+++LG G G V++ G + A+K + + FLA E +++
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHTKV-AVKSLKQGSMSPDAFLA----------EANLMK 59
Query: 665 MLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLAL 724
L H L LY+ T + + ++ EY G L + G + A++ +
Sbjct: 60 QLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGM 118
Query: 725 EYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++ I+R+L+ NILV + + DF L+
Sbjct: 119 AFIEERNYIHRNLRAANILVSDTLSCKIADFGLA 152
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVV 896
++APE +K + D W+FG+ L+E+ P++G NE+ L V+
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 247
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ LG G GTVY I I V E R P+A E ++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 74
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 75 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 132
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDF 755
L +++RDL N+LV+ H+ +TDF
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 23/192 (11%)
Query: 617 LGCGDIGTVYLAEL-----IGTN--CLFAIKVMDNE-FLARRKKMPRAQTEREI-----L 663
+G G G +YLA++ +G++ C+ ++ DN K RA +I
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 664 RMLDHPFLPTLYSQFTSD----NLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAE 719
R L + +P + D + ++M+ G DL + + K FS
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLR 160
Query: 720 VLLALEYLHMLGVIYRDLKPENILV--REDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPA 777
+L LEY+H ++ D+K N+L+ + + L D+ L+ R P + DP
Sbjct: 161 ILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR--YCPEGVHKEYKEDPK 218
Query: 778 RVSGPCTESNCI 789
R E I
Sbjct: 219 RCHDGTIEFTSI 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 849 YLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANV 895
++ PE I + D W +G+ L+E+ YG P+ G +EE + V
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 289
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMP-RAQTEREILRMLDHP 669
+ + KLG G G VY A TN AIK + E + +P A E +L+ L H
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE--HEEEGVPGTAIREVSLLKELQHR 93
Query: 670 FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKC--FSEPAARFYVAEVLLALEYL 727
+ L S ++ L+ EY DL +K + K S + ++ +++ + +
Sbjct: 94 NIIELKSVIHHNHRLHLIFEYAEN-DL----KKYMDKNPDVSMRVIKSFLYQLINGVNFC 148
Query: 728 HMLGVIYRDLKPENILV 744
H ++RDLKP+N+L+
Sbjct: 149 HSRRCLHRDLKPQNLLL 165
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 77/198 (38%), Gaps = 44/198 (22%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIG-----TVYLAELIGTNCLFAIKVMDN 644
D++WE R L++G + LG G G T Y G + A+K++
Sbjct: 37 DLKWEFPRE-NLEFGKV----------LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKE 85
Query: 645 EFLARRKKMPRAQTEREILRML-DHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVLRQK 702
+ A + +E +++ L H + L T L+ EYC GDL + LR K
Sbjct: 86 K--ADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 703 QLGKCFSEPAARF----------------------YVAEVLLALEYLHMLGVIYRDLKPE 740
+ + FSE + + +V +E+L ++RDL
Sbjct: 144 R--EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201
Query: 741 NILVREDGHIMLTDFDLS 758
N+LV + + DF L+
Sbjct: 202 NVLVTHGKVVKICDFGLA 219
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 849 YLAPEIIKG---EGHGAAVDWWTFGIFLYELLYGRTPFKGSGNEETLANVVMQSLKFPDS 905
++APE ++ + + + D W+F + L+EL+ PF N E V ++ L+
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIP 233
Query: 906 PLISFQARDLIRGLLIKEPENR 927
P IS L + ++P R
Sbjct: 234 PGISPHVSKLXKICXNEDPAKR 255
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 611 FNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLARRKKMPRAQTE----REILRML 666
F ++ L G GTVY I I V E R P+A E ++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL--REATSPKANKEILDEAYVMASV 81
Query: 667 DHPFLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFSEPAARFYVAEVLLALEY 726
D+P + L + + L+ + P G L ++ S+ + V ++ + Y
Sbjct: 82 DNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNY 139
Query: 727 LHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
L +++RDL N+LV+ H+ +TDF L+
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 16/172 (9%)
Query: 594 EAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELI---GTNCLFAIKVMDNEFLARR 650
+A++HV + S+ + HFN + +G G G VY L+ G A+K ++ +
Sbjct: 17 QAVQHVVIGPSSL-IVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR--ITDI 71
Query: 651 KKMPRAQTEREILRMLDHP-FLPTLYSQFTSDNLSCLVMEYCPGGDLHVLRQKQLGKCFS 709
++ + TE I++ HP L L S+ +V+ Y GDL + +
Sbjct: 72 GEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET----H 127
Query: 710 EPAARFYVA---EVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
P + + +V ++YL ++RDL N ++ E + + DF L+
Sbjct: 128 NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 33.9 bits (76), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 716 YVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCSVSPTLLKSSSNMD 775
Y +V +E+L I+RDL NIL+ E+ + + DF L+ +P ++
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 776 PARVSGP 782
P + P
Sbjct: 264 PLKWMAP 270
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKGSGNEETLANVVMQSLK 901
+++APE I + + D W++G+ L+E+ G +P+ G +E + + + ++
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMR 320
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 85/228 (37%), Gaps = 41/228 (17%)
Query: 590 DVRWEAIRHVRLQYGSIGLRHFNLLQKLGCGDIGTVYLAELIGTNCLFAIKVMDNEFLAR 649
D +WE R+ RL +G + LG G G V A G IK +A
Sbjct: 38 DHKWEFPRN-RLSFG----------KTLGAGAFGKVVEATAYGL-----IKSDAAMTVAV 81
Query: 650 RKKMPRAQ-TEREIL--------RMLDHPFLPTLYSQFTSDNLSCLVMEYCPGGDL-HVL 699
+ P A TERE L + +H + L T + ++ EYC GDL + L
Sbjct: 82 KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
Query: 700 RQKQLGKCFSE--PAARF-------------YVAEVLLALEYLHMLGVIYRDLKPENILV 744
R+K+ S+ PA + +V + +L I+RDL NIL+
Sbjct: 142 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 201
Query: 745 REDGHIMLTDFDLSLRCSVSPTLLKSSSNMDPARVSGPCTESNCIQPF 792
+ DF L+ + + P + P + NC+ F
Sbjct: 202 THGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 848 EYLAPEIIKGEGHGAAVDWWTFGIFLYELL-YGRTPFKG 885
+++APE I + D W++GIFL+EL G +P+ G
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 273
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 17/158 (10%)
Query: 617 LGCGDIGTVYLAELI--GTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTL 674
+G G+ G V A + G AIK M E+ ++ A + ++ HP + L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 675 YSQFTSDNLSCLVMEYCPGGDL-HVLRQKQL-------------GKCFSEPAARFYVAEV 720
L +EY P G+L LR+ ++ S + A+V
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 721 LLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLS 758
++YL I+R+L NILV E+ + DF LS
Sbjct: 149 ARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.129 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,392,268
Number of Sequences: 62578
Number of extensions: 1032729
Number of successful extensions: 4466
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 1659
Number of HSP's gapped (non-prelim): 2100
length of query: 992
length of database: 14,973,337
effective HSP length: 108
effective length of query: 884
effective length of database: 8,214,913
effective search space: 7261983092
effective search space used: 7261983092
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)