Your job contains 1 sequence.
>001958
MMMMNQNQQGSTQNIASSVDPNSVENRYVVDASQSQASSYFPSTTGSGAVSWATHGVNNQ
STENGNLSNASYHHEQHTESHVKSLQDGLNATSLTSSSNLGTTNVAQDYSGYTSYPNSSD
PYAYGSTAYPGYYSSYQQQPNHSYPQPVGAYQNSGAPYQPISSFQNSGSYVGPASYSATY
YNPGDYQTAGGYPSSGYSHQTTSWNEGNYTNYTSHQYSNYTSDTSGAYSSGTAPATSLQY
QQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQPPGVTAGYPTAHSQPAPIYHQSWQ
QDSSSSHVSSLQPAATSNGSHDSYWKHGTPSFQNRQVSPVQPHYSKPLEQKTSYNNFQDQ
HKAACPQGPSSQYAIGQQMAPSYQSPPVQTSPQLDNRRVSKLQIPTNPRIASNLALGLPK
TDKDSSTANAAAKPAYIGVSLAKSNEKVVSHADSRVEPGTFPKSLCGYVERALARCKGDA
EIAASQAVMGEIIKKANSDGTLFSRDWDVEPLFPKPTTEAVTKDLPTSTPLSALSKNKRS
PSRRTKSRWEPLPEEKPIDKLASSTNEIVKFSGWIHANEKDRKHISGSVSKEDRLNNIKF
HLSEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYSGAIALANSPEE
RMRRENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGGSRAVEDID
WDALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQNSQKNYLYKCDQLKSIR
QDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGIEGCCMEFSAYHL
LCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNT
CLMDLYVEKMRFKAVSCMSRSYRPTVPVSYVAQVLGFTGVSPTNEECEERDSDGLEECVE
WLKAHGASLVTDANGEVQLDAKVHLIQPYYN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001958
(991 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2056058 - symbol:SAC3A "AT2G39340" species:370... 2749 3.6e-286 1
ZFIN|ZDB-GENE-070410-6 - symbol:zgc:158262 "zgc:158262" s... 601 9.9e-61 2
UNIPROTKB|Q96PV6 - symbol:LENG8 "Leukocyte receptor clust... 577 1.5e-58 2
POMBASE|SPBC2A9.11c - symbol:SPBC2A9.11c "nuclear export ... 545 2.7e-55 2
MGI|MGI:2142195 - symbol:Leng8 "leukocyte receptor cluste... 503 5.5e-53 3
SGD|S000006249 - symbol:THP3 "Protein that may have a rol... 364 2.7e-32 1
DICTYBASE|DDB_G0277813 - symbol:DDB_G0277813 "SAC3/GANP f... 386 4.6e-31 3
CGD|CAL0000561 - symbol:orf19.6271 species:5476 "Candida ... 295 3.7e-22 2
UNIPROTKB|Q5AAX8 - symbol:CaO19.6271 "Putative uncharacte... 295 3.7e-22 2
FB|FBgn0038642 - symbol:Muc91C "Mucin 91C" species:7227 "... 161 1.0e-07 1
FB|FBgn0085362 - symbol:Vml "Vitelline membrane-like" spe... 158 1.1e-07 1
FB|FBgn0038492 - symbol:Mur89F "Mucin related 89F" specie... 138 1.6e-05 2
UNIPROTKB|O60318 - symbol:MCM3AP "80 kDa MCM3-associated ... 137 2.2e-05 3
ZFIN|ZDB-GENE-040715-1 - symbol:mcm3ap "MCM3 minichromoso... 115 2.3e-05 2
UNIPROTKB|P11414 - symbol:POLR2A "DNA-directed RNA polyme... 135 2.4e-05 1
UNIPROTKB|I3LQ53 - symbol:I3LQ53 "Uncharacterized protein... 135 3.0e-05 1
UNIPROTKB|F1PJG2 - symbol:SAC3D1 "Uncharacterized protein... 131 5.1e-05 1
FB|FBgn0036203 - symbol:Muc68D "Mucin 68D" species:7227 "... 137 6.8e-05 1
UNIPROTKB|F1N4T6 - symbol:LOC507750 "Uncharacterized prot... 126 0.00013 1
UNIPROTKB|P24928 - symbol:POLR2A "DNA-directed RNA polyme... 135 0.00015 1
RGD|1587326 - symbol:Polr2a "polymerase (RNA) II (DNA dir... 135 0.00015 1
MGI|MGI:1930089 - symbol:Mcm3ap "minichromosome maintenan... 134 0.00017 3
TAIR|locus:2082485 - symbol:SAC3B "AT3G06290" species:370... 110 0.00018 4
UNIPROTKB|G3N1X9 - symbol:LOC507750 "Uncharacterized prot... 126 0.00018 1
UNIPROTKB|G3MZY8 - symbol:POLR2A "DNA-directed RNA polyme... 133 0.00025 1
MGI|MGI:98086 - symbol:Polr2a "polymerase (RNA) II (DNA d... 133 0.00025 1
UNIPROTKB|I3LCF4 - symbol:MCM3AP "Uncharacterized protein... 146 0.00036 5
RGD|1308049 - symbol:Sac3d1 "SAC3 domain containing 1" sp... 123 0.00042 1
UNIPROTKB|Q16VD3 - symbol:lig "Protein lingerer" species:... 143 0.00044 2
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 126 0.00047 1
UNIPROTKB|F1PGS0 - symbol:POLR2A "DNA-directed RNA polyme... 130 0.00051 1
ZFIN|ZDB-GENE-041008-78 - symbol:polr2a "polymerase (RNA)... 128 0.00084 1
DICTYBASE|DDB_G0271916 - symbol:rtoA "unknown" species:44... 119 0.00088 1
MGI|MGI:1913656 - symbol:Sac3d1 "SAC3 domain containing 1... 120 0.00088 1
DICTYBASE|DDB_G0271670 - symbol:DDB_G0271670 species:4468... 119 0.00091 1
>TAIR|locus:2056058 [details] [associations]
symbol:SAC3A "AT2G39340" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03399 GO:GO:0005634 EMBL:CP002685
UniGene:At.48570 UniGene:At.70170 InterPro:IPR005062
IPI:IPI00526769 RefSeq:NP_181466.2 UniGene:At.75352
ProteinModelPortal:F4IUY8 PRIDE:F4IUY8 EnsemblPlants:AT2G39340.1
GeneID:818519 KEGG:ath:AT2G39340 OMA:QQPSHSY Uniprot:F4IUY8
Length = 1006
Score = 2749 (972.8 bits), Expect = 3.6e-286, P = 3.6e-286
Identities = 564/992 (56%), Positives = 687/992 (69%)
Query: 7 NQQGSTQNIASSVDPNSVENRYVVDASQSQASSYFPSTTGSGAVSWATHGVNNQSTENGN 66
N G+TQ +A +DPNS+ENRY VD SQ+Q SY ST GS + W H V NQ+ ENGN
Sbjct: 2 NHGGNTQAVAP-MDPNSIENRYGVDGSQTQKYSYQYST-GSESAPWTGHSVENQAVENGN 59
Query: 67 LSNASYHHEQHTESHVKSLQDXXXXXXXXXXXXXXXXXVAQDYSGYTSYPNSSDPYAYGS 126
SN++Y+H Q T ++Q+ VAQDYSGYT Y SSDP+ Y +
Sbjct: 60 YSNSNYYHPQPTGPATGNVQEIPNTVSFTISSTSGTANVAQDYSGYTPYQTSSDPHNYSN 119
Query: 127 TAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQNSGSYVGPASYSATYYNPGDY 186
T Y P+ SYPQPVGAYQN+GAP QP+SSFQN GSY G SYS TYYNP DY
Sbjct: 120 TGYSNYYSGYQQQPSQSYPQPVGAYQNTGAP-QPLSSFQNPGSYAGTPSYSGTYYNPADY 178
Query: 187 QTAGGY-------------PSSGYSHQTTSWNEGNYTNYTSHQYSNYTSDTSGAYSSGTA 233
QTAGGY PS+ YS+QT + N+GNYT+YTS+ Y NYT D + +SS A
Sbjct: 179 QTAGGYQSTNYNNQTAGSYPSTNYSNQTPASNQGNYTDYTSNPYQNYTPDAANTHSSTIA 238
Query: 234 PATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSS--NQVLQPPGVTAGYPTAHSQP 291
+ YQQ Y+QW +YYSQTEV CAPGTE LS ++S +Q PGVT+ P ++SQP
Sbjct: 239 TTPPVHYQQNYQQWTEYYSQTEVPCAPGTEKLSTPTTSAYSQSFPVPGVTSEMPASNSQP 298
Query: 292 APIYHXXXXXXXXXXXXXXXXPAATSNGSHDSYWKHGTPSFQNRQVSPVQPHYSKPLEQK 351
AP Y P A + S+D+YW H PS Q P Q +Y PLE K
Sbjct: 299 APSYVQPWRPETDSSHPPSQQPGAAVSTSNDTYWMHQAPSLQAHHPVPPQNNYQSPLETK 358
Query: 352 TSYNN-FQDQHKAACPQGPSSQYAIGQQMAPSYQSPPVQTSPQLDNRRVSKLQIPTNPRI 410
Y FQ +A PQ +SQ + Q AP P QT+P +D++RVSK+QIPTNPRI
Sbjct: 359 PLYETPFQGHQRATYPQEMNSQSSFHQ--APLGYRQPTQTAPLVDSQRVSKVQIPTNPRI 416
Query: 411 ASNLALGLPKTDKDSSTANAAAKPAYIGVSLAKSNEKVVSHADSRVEPGTFPKSLCGYVE 470
ASNL G K DKDS+ A+AA PAY+ VS+ K + H + +PGTFPKSL G+VE
Sbjct: 417 ASNLPSGFTKMDKDSTAASAAQAPAYVSVSMPKPKD----HTTAMSDPGTFPKSLRGFVE 472
Query: 471 RALARCKGDAEIAASQAVMGEIIKKANSDGTLFSRDWDVEPLFPKPTTEAVTKDLPTSTP 530
RA ARCK D E + + + +I+KKA D TL++RDWD EPL TT VT +S
Sbjct: 473 RAFARCKDDKEKESCEVALRKIVKKAKEDNTLYTRDWDTEPLSTVTTTN-VTNSESSSAQ 531
Query: 531 LSALSKNKRSPSRRTKSRWEPLPEEKPIDKLASSTNEIVKFSGWIHANEKDRKHISGSVS 590
LS+L +NK SP+RR KSRWEPL E KP K AS+ + VKF W H NE ++K S S
Sbjct: 532 LSSL-QNK-SPTRRPKSRWEPLVEGKPFVKPASTFSSAVKFGVWNHQNENNKKS-SESFQ 588
Query: 591 KEDRLNNIKFHLSEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYSG 650
K D K S Q SA KSFQRPVKRQR S G T + +ASSDSDK+ LT YYS
Sbjct: 589 KVDAATGFKPTYSGQNSAKKSFQRPVKRQRFSG-GAATAIDDEASSDSDKD--LTPYYSS 645
Query: 651 AIALANSPEERMRRENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDD 710
A+ALA S EE+ RR++RSKRF++ QG+ + K KNA GNL+ RRA+AL +SK FD+
Sbjct: 646 AMALAGSAEEKKRRDSRSKRFEKIQGHSRGNDLTKPKNANVGNLHSRRATALRLSKVFDE 705
Query: 711 GGSRAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQNSQKNYL 770
GSRAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDP+TVRPE+VLEKAL MVQ+SQKNYL
Sbjct: 706 SGSRAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDPATVRPEDVLEKALIMVQDSQKNYL 765
Query: 771 YKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGIEG 830
+KCDQLKSIRQDLTVQRI N LTAKVYETHARLA+E GDLPEYNQC SQLK LYAEG+EG
Sbjct: 766 FKCDQLKSIRQDLTVQRIHNHLTAKVYETHARLALEAGDLPEYNQCLSQLKTLYAEGVEG 825
Query: 831 CCMEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFR 890
C +EF+AY LL + LHSNN RELLS MSRLS++ K+D+AV+HAL+VRAAV+SGNY+MFFR
Sbjct: 826 CSLEFAAYSLLYITLHSNNNRELLSSMSRLSEEDKKDEAVRHALSVRAAVTSGNYVMFFR 885
Query: 891 LYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYRPTVPVSYVAQVLGFTGVSPTNEECEER 950
LYKTAPN+N+CLMDLYVEKMR+KAV+ MSRS RPT+PVSY+ QVLGFTG + +E +E+
Sbjct: 886 LYKTAPNMNSCLMDLYVEKMRYKAVNFMSRSCRPTIPVSYIVQVLGFTGAA--SEGTDEK 943
Query: 951 DSDGLEECVEWLKAHGASLVTDANGEVQLDAK 982
++DG+E+C+EWLK HGA+++TD+NG++ LD K
Sbjct: 944 ETDGMEDCLEWLKTHGANIITDSNGDMLLDTK 975
>ZFIN|ZDB-GENE-070410-6 [details] [associations]
symbol:zgc:158262 "zgc:158262" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03399 ZFIN:ZDB-GENE-070410-6 InterPro:IPR005062
EMBL:BC139488 IPI:IPI00845920 RefSeq:NP_001082988.1
UniGene:Dr.44195 Ensembl:ENSDART00000113345 GeneID:100037367
KEGG:dre:100037367 eggNOG:NOG313808 GeneTree:ENSGT00390000008006
HOGENOM:HOG000001575 HOVERGEN:HBG070702 OMA:CEQMKSI
OrthoDB:EOG4J6RQC NextBio:20788530 Bgee:A4QNR8 Uniprot:A4QNR8
Length = 839
Score = 601 (216.6 bits), Expect = 9.9e-61, Sum P(2) = 9.9e-61
Identities = 172/548 (31%), Positives = 265/548 (48%)
Query: 401 KLQIPTNPRIASNLALGLPKTDKDSSTANAAAKPAYIGVSLAKSNEKVVSHADSRVEPGT 460
K IP P + SN P ++ A A G + A S+ S ++ P
Sbjct: 279 KFNIPKRPYVMSNQ--NFPPGEQGPGLAPPTATNPSSGSTSATSS---ASTGGAQTRPQD 333
Query: 461 FPKSLCGYVERALARCKGDAEIAASQAVMGEIIKKANSDGTLFSRDWDVEPL---FPKPT 517
+P+++ YV+R C+ + + ++ ++ ++++ DG+ ++ DW+ EPL PK +
Sbjct: 334 WPQAMKEYVQRCFTACESEEDKDRTEKMLKDLLQSRLQDGSAYTIDWNREPLPDLKPKQS 393
Query: 518 TEAVTKDLPTSTPLSALSKNKRSPSRRTKSRWEPLPEEKPIDKLASSTNEIVKFSGWIHA 577
V L + + R + + P + S+ + S H+
Sbjct: 394 RWEVMPQLSQENSIGRGGATRGRGGARLGNYRNVFSQRSPSSSSSGSSRSSSR-SPSPHS 452
Query: 578 NEKDRK--HISGSVSKEDRLNNIKFHLSEQKSASKSFQ-RPVKRQR-LSADGFKTEDNGD 633
+DR H S S S+ D + LS + K + R +R+R A G + G
Sbjct: 453 RHRDRSRHHRSDSGSQSDGSMSSDLRLSLTRRQQKGGRGRGAERERGRGAAGERGRGRGK 512
Query: 634 ASSDSDKEQSLTSYYSGAIALANSPEERMRRENRSKRFDRGQGNRSETNRFKGKNAGTGN 693
A+ + L S G +R+ + D NR K A +
Sbjct: 513 ANRGRRNMEDLAS---GV---------GKKRKGGNAGLDFHDPNREAK---KQSRAARFH 557
Query: 694 LYVRRASALLISKSFD-DGGSRAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDPSTVRPE 752
+R +L FD G++ E + WD + GTCQ+I K YLRLT APDPSTVRP
Sbjct: 558 TKLRTEPLVLNINVFDLPNGTQ--EGLSWDDCPIVGTCQDITKNYLRLTCAPDPSTVRPV 615
Query: 753 EVLEKALQMVQ---NSQKNYLYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGD 809
VL K+L V+ S ++Y+Y C+Q+KSIRQDLTVQ +R T +VYETHAR+A+E GD
Sbjct: 616 PVLRKSLIAVKAHWKSNQDYVYACEQMKSIRQDLTVQGVRTDFTVEVYETHARIALEKGD 675
Query: 810 LPEYNQCQSQLKILYAEGIEGCCMEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKA 869
E+NQCQ+QLK LY + EF+AY L+ I + N +L + + L+ + + D
Sbjct: 676 HEEFNQCQTQLKALYKDCPSDNVGEFTAYRLIYYIF-TKNSGDLTTELVYLTTELRADPC 734
Query: 870 VKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYRPTVPVS 929
V HAL +R A + GN+ FFRLY+ AP + L+D +VE+ R A+ + +S+RP+V V
Sbjct: 735 VAHALELRTAWALGNFHRFFRLYQKAPRMAAYLIDKFVERERNIALRAILKSFRPSVSVE 794
Query: 930 YVAQVLGF 937
YV L F
Sbjct: 795 YVQSSLAF 802
Score = 135 (52.6 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 115/547 (21%), Positives = 185/547 (33%)
Query: 159 QPISSFQNSGSYVGPASYSATYYNPGDYQTAGGYPSSGYSHQT-TSWNEGNYTNYTSHQY 217
Q ++S S + P++ T G YQ A S+ Q W + N Y + Y
Sbjct: 37 QALASISKSQNSTKPSTNQTTQ-QAGQYQAAVTDSSAMQQQQYYQQWYQQNQQQYAGYPY 95
Query: 218 S-NY--------------TSDTSGAYSSGTAP---ATSLQYQQQYKQWADYYSQTEVSCA 259
NY G Y + T P A S+ + Q ++Y Q
Sbjct: 96 PYNYYYPMPPYGGPYPPGQYGVPGGYQTPTTPTGQAPSMPTMED--QSSNYPPQPPPPAT 153
Query: 260 PGTENLSVASSSNQVLQPPGVTAGYPTAHSQPAPIYHXXXXXXXXXXXXXXXXPAATSNG 319
P S SS PP P QP Y SN
Sbjct: 154 PQPPPQSPTSSDQPPPPPP------PPIPPQPNAQYPRPPSQTPYSPNGVLPYSPTDSNP 207
Query: 320 SHDSYWKHGT--PSFQNRQVSPVQPHYSKPLEQKTSYNNFQDQHKAACPQGPSSQYAIGQ 377
Y G P +Q Q QPH + Y + A P S+ GQ
Sbjct: 208 MMRGY-NPGQIRPGYQGYQTPVYQPHQQQA-PAPGLYGG-AGRVDAKKPNN-SNMNKGGQ 263
Query: 378 QMAPSYQSPPVQTSPQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTANAAAKPAYI 437
Q+ Q Q K IP P + SN P ++ A A
Sbjct: 264 QLW--------QRMKQAPGTGAVKFNIPKRPYVMSNQ--NFPPGEQGPGLAPPTATNPSS 313
Query: 438 GVSLAKSNEKVVSHADSRVEPGTFPKSLCGYVERALARCKGDAEIAASQAVMGEIIKKAN 497
G + A S+ S ++ P +P+++ YV+R C+ + + ++ ++ ++++
Sbjct: 314 GSTSATSS---ASTGGAQTRPQDWPQAMKEYVQRCFTACESEEDKDRTEKMLKDLLQSRL 370
Query: 498 SDGTLFSRDWDVEPL---FPKPTTEAVTKDLPTSTPLSALSKNKRSPSRRTKSRWEPLPE 554
DG+ ++ DW+ EPL PK + V L + + R + +
Sbjct: 371 QDGSAYTIDWNREPLPDLKPKQSRWEVMPQLSQENSIGRGGATRGRGGARLGNYRNVFSQ 430
Query: 555 EKPIDKLASSTNEIVKFSGWIHANEKDRK--HISGSVSKEDRLNNIKFHLSEQKSASKSF 612
P + S+ + S H+ +DR H S S S+ D + LS + K
Sbjct: 431 RSPSSSSSGSSRSSSR-SPSPHSRHRDRSRHHRSDSGSQSDGSMSSDLRLSLTRRQQKGG 489
Query: 613 Q-RPVKRQR-LSADGFKTEDNGDASSDSDKEQSLTSYYS-----GAIALA-NSPEERMRR 664
+ R +R+R A G + G A+ + L S G L + P ++
Sbjct: 490 RGRGAERERGRGAAGERGRGRGKANRGRRNMEDLASGVGKKRKGGNAGLDFHDPNREAKK 549
Query: 665 ENRSKRF 671
++R+ RF
Sbjct: 550 QSRAARF 556
Score = 76 (31.8 bits), Expect = 9.9e-61, Sum P(2) = 9.9e-61
Identities = 31/117 (26%), Positives = 47/117 (40%)
Query: 191 GYPSSGYS--HQTTSWNEGNYT--NYTSHQYS-----NYTSDTSGAYSSGTAPATSLQYQ 241
G SSG H+ W + + + Q S N T+ +G Y + ++++Q Q
Sbjct: 17 GNNSSGEGPVHENPEWEKARQALASISKSQNSTKPSTNQTTQQAGQYQAAVTDSSAMQQQ 76
Query: 242 QQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQPPG---VTAGY--PTAHSQPAP 293
Q Y+QW +Q + + P N PPG V GY PT + AP
Sbjct: 77 QYYQQWYQQ-NQQQYAGYPYPYNYYYPMPPYGGPYPPGQYGVPGGYQTPTTPTGQAP 132
Score = 51 (23.0 bits), Expect = 4.3e-58, Sum P(2) = 4.3e-58
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 152 QNSGAPYQPISSFQNSGSYVGPASYSATYYNPGDYQTAGGY 192
Q +G PY P + + Y GP Y PG Y GGY
Sbjct: 89 QYAGYPY-PYNYYYPMPPYGGP-------YPPGQYGVPGGY 121
Score = 49 (22.3 bits), Expect = 6.9e-58, Sum P(2) = 6.9e-58
Identities = 14/52 (26%), Positives = 17/52 (32%)
Query: 109 YSGYTSYPNSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQP 160
Y+ Y P PY G PG + P Q+S P QP
Sbjct: 97 YNYYYPMPPYGGPYPPGQYGVPGGYQTPTTPTGQAPSMPTMEDQSSNYPPQP 148
>UNIPROTKB|Q96PV6 [details] [associations]
symbol:LENG8 "Leukocyte receptor cluster member 8"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF03399 EMBL:CH471135 EMBL:CU467002
EMBL:CU207370 InterPro:IPR005062 eggNOG:NOG313808
HOGENOM:HOG000001575 HOVERGEN:HBG070702 EMBL:AB067519 EMBL:AL834532
EMBL:BC028048 IPI:IPI00177888 IPI:IPI00217858 IPI:IPI00386039
RefSeq:NP_443157.1 UniGene:Hs.502378 UniGene:Hs.740924
ProteinModelPortal:Q96PV6 IntAct:Q96PV6 MINT:MINT-1435849
STRING:Q96PV6 PhosphoSite:Q96PV6 DMDM:158705886 PaxDb:Q96PV6
PRIDE:Q96PV6 DNASU:114823 Ensembl:ENST00000326764
Ensembl:ENST00000575939 GeneID:114823 KEGG:hsa:114823
UCSC:uc002qfw.2 CTD:114823 GeneCards:GC19P054960 HGNC:HGNC:15500
HPA:HPA042004 HPA:HPA042056 neXtProt:NX_Q96PV6 PharmGKB:PA134903953
ChiTaRS:LENG8 GenomeRNAi:114823 NextBio:79308 ArrayExpress:Q96PV6
Bgee:Q96PV6 CleanEx:HS_LENG8 Genevestigator:Q96PV6 Uniprot:Q96PV6
Length = 779
Score = 577 (208.2 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 188/629 (29%), Positives = 286/629 (45%)
Query: 322 DSYWKHGTPSFQNRQVSPVQPHYSKPLEQKTSYNNFQDQHKAACPQGPSSQYAIGQQMAP 381
D + P Q P QP S P + N+ A Q + A GQ P
Sbjct: 112 DESMSYQAPPQQLPSAQPPQP--SNPPHGAHTLNSGPQPGTAPATQHSQAGPATGQAYGP 169
Query: 382 SYQSPPVQTSPQLDNRRVSKLQ-IPTNPRIASNLALGLPKTDKDSSTANAAAKPAYIGVS 440
+ P + P+ + ++++ P + N+ S +NA + + G
Sbjct: 170 HTYTEPAK--PKKGQQLWNRMKPAPGTGGLKFNIQKRPFAVTTQSFGSNAEGQ--HSGFG 225
Query: 441 LAKSNEKVVSHADSRV------EPGTFPKSLCGYVERALARCKGDAEIAASQAVMGEIIK 494
+ EKV +H+ S +P +P+ + YVER C+ + + ++ ++ E+++
Sbjct: 226 PQPNPEKVQNHSGSSARGNLSGKPDDWPQDMKEYVERCFTACESEEDKDRTEKLLKEVLQ 285
Query: 495 KANSDGTLFSRDWDVEPLFPKPTTEAVTKDLPTSTPLSALSK--NKRSPSRRTKSRWEPL 552
DG+ ++ DW EPL P T E V + P A S R T+ P
Sbjct: 286 ARLQDGSAYTIDWSREPL-PGLTREPVAES-PKKKRWEAASSLHPPRGAGSATRGGGAPS 343
Query: 553 PEEKPIDKLASST--NEIVKFSG---WIHANEK----DRKHISGSVSKEDRLNNIKFHLS 603
P A N KF ++ N D + S S S H
Sbjct: 344 QRGTPGAGGAGRARGNSFTKFGNRNVFMKDNSSSSSTDSRSRSSSRSPTRHFRRSDSHSD 403
Query: 604 EQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYSGAIALANSPEERMR 663
S S + PV R+ G G + D+ + + LA P +R R
Sbjct: 404 SDSSYSGNECHPVGRRNPPPKG-----RGGRGAHMDRGRG-RAQRGKRHDLA--PTKRSR 455
Query: 664 RENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGGSRAVEDIDWDA 723
++ + + + + R G +R +L S + G+ D DW
Sbjct: 456 KKMAALECEDPERELKKQKRAARFQHGHSRR-LRLEPLVLQMSSLESSGA----DPDWQE 510
Query: 724 LTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQ---NSQKNYLYKCDQLKSIR 780
L + GTC +I K YLRLT APDPSTVRP VL+K+L MV+ +++Y + C+Q+KSIR
Sbjct: 511 LQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKCHWKEKQDYAFACEQMKSIR 570
Query: 781 QDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGIEGCCMEFSAYHL 840
QDLTVQ IR + T +VYETHAR+A+E GD E+NQCQ+QLK LYAE + G EF+AY +
Sbjct: 571 QDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAENLPGNVGEFTAYRI 630
Query: 841 LCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNT 900
L I + N ++ + ++ L+ + K D V HALA+R A + GNY FFRLY AP ++
Sbjct: 631 LYYIF-TKNSGDITTELAYLTRELKADPCVAHALALRTAWALGNYHRFFRLYCHAPCMSG 689
Query: 901 CLMDLYVEKMRFKAVSCMSRSYRPTVPVS 929
L+D + ++ R A+ M ++Y VP S
Sbjct: 690 YLVDKFADRERKVALKAMIKTY--VVPSS 716
Score = 55 (24.4 bits), Expect = 1.5e-58, Sum P(2) = 1.5e-58
Identities = 27/82 (32%), Positives = 37/82 (45%)
Query: 225 SGAYSSGTAPATSLQYQQQYKQWADYYSQT-------EVSCAPGT-ENLSVASSSNQV-- 274
S Y S A A++LQ QQQY QW Y+ + PG E++S + Q+
Sbjct: 69 SAQYVS-QAEASALQ-QQQYYQWYQQYNYAYPYSYYYPMPPVPGMDESMSYQAPPQQLPS 126
Query: 275 LQPPGVTA---GYPTAHSQPAP 293
QPP + G T +S P P
Sbjct: 127 AQPPQPSNPPHGAHTLNSGPQP 148
>POMBASE|SPBC2A9.11c [details] [associations]
symbol:SPBC2A9.11c "nuclear export factor (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0051168 "nuclear
export" evidence=ISM] PomBase:SPBC2A9.11c Pfam:PF03399
GO:GO:0005829 GO:GO:0005634 EMBL:CU329671 GO:GO:0006351
GO:GO:0051168 InterPro:IPR005062 eggNOG:NOG313808
RefSeq:NP_596221.1 EnsemblFungi:SPBC2A9.11c.1 GeneID:2540452
KEGG:spo:SPBC2A9.11c HOGENOM:HOG000170697 OrthoDB:EOG4DFSXX
NextBio:20801579 Uniprot:Q1MTP1
Length = 395
Score = 545 (196.9 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 107/213 (50%), Positives = 152/213 (71%)
Query: 728 GTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQNS---QKNYLYKCDQLKSIRQDLT 784
G E+EKRYLRLTSAPDP TVRP VL++ L++++ +KNY Y CDQ KS+RQDLT
Sbjct: 134 GRSTELEKRYLRLTSAPDPDTVRPLPVLKQTLELLKKKWKEEKNYAYICDQFKSLRQDLT 193
Query: 785 VQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGIEGCCMEFSAYHLLCVI 844
VQRI+N+ + VYE HAR+A+E GD+ EYNQCQ+QL LY+ GI G EF AY +L +
Sbjct: 194 VQRIQNEFSVLVYEIHARIALEKGDVGEYNQCQTQLFHLYSFGIPGNTKEFLAYRIL-YM 252
Query: 845 LHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMD 904
L + N+ E+ SL++ L ++ K + AV HAL VR+A+++G+Y FF LY APN+ LMD
Sbjct: 253 LFTKNRSEMNSLLANLKEEDKTNAAVTHALEVRSAMATGDYYKFFHLYLVAPNMGGYLMD 312
Query: 905 LYVEKMRFKAVSCMSRSYRPTVPVSYVAQVLGF 937
L++E+ R +A+ M ++YRP++ + ++A L F
Sbjct: 313 LFIERERVQAMIMMCKAYRPSLTMEFLANTLAF 345
Score = 58 (25.5 bits), Expect = 2.7e-55, Sum P(2) = 2.7e-55
Identities = 20/94 (21%), Positives = 43/94 (45%)
Query: 590 SKEDRLNNIKFHLSEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYS 649
S+ + + +K +S Q + V ++ + + N + DK++ + S
Sbjct: 28 SQPELEDEVKLLISRQYEMGNIWN--VDWSSMNLESLRKLTNAQNTIIEDKKRKVEKPVS 85
Query: 650 G-AIALANSPEERMRRENRSKRFDRGQGNRSETN 682
G +L + +E ++E R +RF+ G +RS+ N
Sbjct: 86 GNQFSLLSEEDEVDKKEKRRRRFENG--SRSQNN 117
>MGI|MGI:2142195 [details] [associations]
symbol:Leng8 "leukocyte receptor cluster (LRC) member 8"
species:10090 "Mus musculus" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
MGI:MGI:2142195 Pfam:PF03399 InterPro:IPR005062 eggNOG:NOG313808
GeneTree:ENSGT00390000008006 HOGENOM:HOG000001575
HOVERGEN:HBG070702 CTD:114823 ChiTaRS:LENG8 EMBL:AK034310
EMBL:AK085304 EMBL:AK170629 EMBL:BC042658 EMBL:BC066768
IPI:IPI00228486 IPI:IPI00458937 RefSeq:NP_766324.1 UniGene:Mm.22831
ProteinModelPortal:Q8CBY3 STRING:Q8CBY3 PhosphoSite:Q8CBY3
PaxDb:Q8CBY3 PRIDE:Q8CBY3 Ensembl:ENSMUST00000037472
Ensembl:ENSMUST00000117274 GeneID:232798 KEGG:mmu:232798
UCSC:uc009exb.1 UCSC:uc009exc.1 NextBio:381234 Bgee:Q8CBY3
CleanEx:MM_LENG8 Genevestigator:Q8CBY3 Uniprot:Q8CBY3
Length = 785
Score = 503 (182.1 bits), Expect = 5.5e-53, Sum P(3) = 5.5e-53
Identities = 104/208 (50%), Positives = 142/208 (68%)
Query: 718 DIDWDALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQNSQK---NYLYKCD 774
D DW L + GTC +I K YLRLT APDPSTVRP VL+K+L MV++ K +Y + C+
Sbjct: 543 DPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKSHWKEKQDYAFACE 602
Query: 775 QLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGIEGCCME 834
Q+KSIRQDLTVQ IR + T +VYETHAR+A+E GD E+NQCQ+QLK LYAE + G E
Sbjct: 603 QMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAENLAGNVGE 662
Query: 835 FSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKT 894
F+AY +L I + N ++ + ++ L+ + K D V HALA+RAA + GNY FFRLY
Sbjct: 663 FTAYRILYYIF-TKNSGDITTELAYLTREMKADPCVAHALALRAAWALGNYHRFFRLYCH 721
Query: 895 APNLNTCLMDLYVEKMRFKAVSCMSRSY 922
AP ++ L+D + ++ R A+ M ++Y
Sbjct: 722 APCMSGYLVDKFADRERKAALKAMIKTY 749
Score = 110 (43.8 bits), Expect = 5.5e-53, Sum P(3) = 5.5e-53
Identities = 70/320 (21%), Positives = 121/320 (37%)
Query: 213 TSHQYSNYTSDTSGAYSSGTAPATSLQYQQQ-YKQWADYYSQTEVSCA--PGTENLSVAS 269
TS ++ + + A A A++LQ QQQ Y QW Y+ P + S S
Sbjct: 55 TSSSKASSSGPVASAQYVSQAEASALQQQQQQYYQWYQQYNYAYPYSYYYPMSMYQSYGS 114
Query: 270 SSNQVLQPPGVTAGYPTAHSQ-PAPIYHXXXXXXXXXXXXXXXXPAATSNGSHDSYWKHG 328
S G+ + Y +A +Q P+ H P G +S
Sbjct: 115 PSQY-----GMASSYGSATAQQPSAPQHQGTLNQ----------PPVP--GMDESMAYQA 157
Query: 329 TPSFQNRQVSPVQPHYSKPLEQKTSYNNFQDQHKAACPQGPSSQYAIGQQMAPSYQSPPV 388
+P Q P QP S+ S +N A Q + GQ P S P
Sbjct: 158 SPQ-QLPAAQPPQPSNSQ--HGTHSLSNGPQPGTAPSTQHSQAGAPTGQAYGPHSYSEPA 214
Query: 389 QTSPQLDNRRVSKLQ-IPTNPRIASNLALGLPKTDKDSSTANAAAKPAYIGVSLAKSNEK 447
+ P+ + ++++ P + N+ S ++N+ + + G N +
Sbjct: 215 K--PKKGQQLWTRMKPAPGTGGLKFNIQKRPFAVTSQSFSSNSEGQHSSFGPQPNSENTQ 272
Query: 448 VVSHADSRV----EPGTFPKSLCGYVERALARCKGDAEIAASQAVMGEIIKKANSDGTLF 503
S R +P +P+ + YVER C+ + + ++ ++ E+++ DG+ +
Sbjct: 273 NRSGPSGRGNLSGKPDDWPQDMKEYVERCFTACESEEDKDRTEKLLKEVLQARLQDGSAY 332
Query: 504 SRDWDVEPLFPKPTTEAVTK 523
+ DW EPL P T E V +
Sbjct: 333 TIDWSREPL-PGLTREPVAE 351
Score = 59 (25.8 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 43/199 (21%), Positives = 64/199 (32%)
Query: 49 AVSWATHG--VNNQSTENGNLSNASYHHEQHTESHVKSLQDXXXXXXXXXXXXXXXXXVA 106
A W++ V S ENG H E ++L VA
Sbjct: 10 AADWSSQYSMVTGNSRENG--METPMHENPEWEKARQALASISKAGATSSSKASSSGPVA 67
Query: 107 QDYSGYTSYPNSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQ-PISSFQ 165
+ Y S +S Y P +SY P+ YQ+ G+P Q ++S
Sbjct: 68 S--AQYVSQAEASALQQQQQQYYQWYQQYNYAYP-YSYYYPMSMYQSYGSPSQYGMASSY 124
Query: 166 NSGSYVGPAS--YSATYYNPGDYQTAGGYPSSGYSHQTTSWNEGNYTNYTSHQYSNYTSD 223
S + P++ + T P G S Y ++ Q+ T
Sbjct: 125 GSATAQQPSAPQHQGTLNQP---PVPGMDESMAYQASPQQLPAAQPPQPSNSQHG--THS 179
Query: 224 TSGAYSSGTAPATSLQYQQ 242
S GTAP+T Q+ Q
Sbjct: 180 LSNGPQPGTAPST--QHSQ 196
Score = 47 (21.6 bits), Expect = 5.5e-53, Sum P(3) = 5.5e-53
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 658 PEERMRRENRSKRFDRGQGNR 678
PE ++++ R+ RF G R
Sbjct: 504 PERELKKQKRAARFQHGHSRR 524
Score = 44 (20.5 bits), Expect = 4.2e-46, Sum P(3) = 4.2e-46
Identities = 12/57 (21%), Positives = 24/57 (42%)
Query: 193 PSSGYSHQTTSWNEGNYTNYTSHQYSNYTSDTSGAYSSGTAPATSLQYQQQYKQWAD 249
P + S +S +EG ++++ S T + SG G + Q K++ +
Sbjct: 243 PFAVTSQSFSSNSEGQHSSFGPQPNSENTQNRSGPSGRGNLSGKPDDWPQDMKEYVE 299
>SGD|S000006249 [details] [associations]
symbol:THP3 "Protein that may have a role in transcription
elongation" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] SGD:S000006249 Pfam:PF03399 GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 EMBL:Z71255 EMBL:BK006949 GO:GO:0000398
EMBL:Z49219 InterPro:IPR005062 EMBL:Z73616 eggNOG:NOG313808
GeneTree:ENSGT00390000008006 OrthoDB:EOG4DFSXX PIR:S54069
RefSeq:NP_015370.1 ProteinModelPortal:Q12049 DIP:DIP-3903N
IntAct:Q12049 MINT:MINT-2492728 STRING:Q12049 PaxDb:Q12049
PRIDE:Q12049 EnsemblFungi:YPR045C GeneID:856158 KEGG:sce:YPR045C
CYGD:YPR045c OMA:TYLCDQF NextBio:981295 Genevestigator:Q12049
GermOnline:YPR045C Uniprot:Q12049
Length = 470
Score = 364 (133.2 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 125/405 (30%), Positives = 188/405 (46%)
Query: 605 QKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSD--KEQSLTSYYSGAIALANSPEERM 662
QK +K+ ++ + R A +G+ S+S+ ++ S + + S +E
Sbjct: 85 QKRMNKNIKKKLPRVSKKASALSNGVSGNVMSNSNIVGHGAVGSASGWKVEMGGS-DELE 143
Query: 663 RRENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGGSRAVEDIDWD 722
RR+ R++RF QG + TN N NL + SKS D
Sbjct: 144 RRKRRAERFS--QGPSATTNSNDNLNEDFANLNA------ISSKS---------HQYD-K 185
Query: 723 ALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKA----LQMVQNSQKNYLYKCDQLKS 778
+ V G CQ +EK YLRLTS P+P +RP +L+K + Q+ Y Y CDQ KS
Sbjct: 186 KIHVVGRCQTLEKSYLRLTSEPNPDLIRPPNILQKMYCLLMDKYQSKTATYTYLCDQFKS 245
Query: 779 IRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGI--EGCCMEFS 836
+RQDL VQ I N T KVY+THAR+A+ENGDL E+NQCQ+++ L+ + EF
Sbjct: 246 MRQDLRVQMIENSFTIKVYQTHARIALENGDLGEFNQCQNRIMALFENPTIPKKSYSEFI 305
Query: 837 AYHLLCVIL---HSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYK 893
Y +L +L + + L L+ S + +D+ VK + GNY F + Y
Sbjct: 306 CYSVLYSMLTEDYPSISHLKLKLIDDGSSEILEDEHVKMIFELSDMKLVGNYHYFMKNYL 365
Query: 894 TAPNLNTCLMD--LYVEKMRFKAVSCMSRSYRPTVPVSYVAQVLGFTGVSPTNEECEERD 951
CL++ L +EK+ F + C +SY V + +V F + T E++
Sbjct: 366 KLHKFEKCLINSFLNLEKLIFLTIIC--KSYNQ-VNLDFVKSEFNFNSIEETTNFLNEQN 422
Query: 952 SDGLEECVEWLKAHGASLVTDANGEVQ----LDAK---VHLIQPY 989
L E + L +TD+NG+ L+ K V LIQ Y
Sbjct: 423 ---LTEFI--LNKQ----ITDSNGKSSNIKILNTKGCRVQLIQNY 458
>DICTYBASE|DDB_G0277813 [details] [associations]
symbol:DDB_G0277813 "SAC3/GANP family protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0277813 Pfam:PF03399 EMBL:AAFI02000022
InterPro:IPR005062 eggNOG:NOG313808 RefSeq:XP_642492.1
EnsemblProtists:DDB0233557 GeneID:8621203 KEGG:ddi:DDB_G0277813
InParanoid:Q54Z61 ProtClustDB:CLSZ2846842 Uniprot:Q54Z61
Length = 774
Score = 386 (140.9 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 101/321 (31%), Positives = 172/321 (53%)
Query: 630 DNGDASSDSDKEQSLTSYYSGAIALANSPEERMRRENRSKRFDRGQGNRSETNRFKGKNA 689
+N + + +S S+T +SP++ + N++ + + N + N N
Sbjct: 425 NNSNNNRNSQNSPSITPTRGPLKFNVDSPKQPIVFNNQNNQNNNNNNNNNNNNNNNNNNN 484
Query: 690 GTGNLYVRRASALLISKSFDDGGSRAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDPSTV 749
N + L ++S D +V+ I GTC++ EK YLRLT DP+ +
Sbjct: 485 NNNNN--NNKNVKLTNESID---LNSVKPII-------GTCKDYEKSYLRLTGPADPAKI 532
Query: 750 RPEEVLE----KALQMVQNSQKNYLYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAI 805
R E+LE K ++ QN+ KN+ Y DQLKSIRQDL VQ IRN+ T VYE +A++ +
Sbjct: 533 RSIEILETWFPKLIRKYQNN-KNFNYALDQLKSIRQDLMVQHIRNKFTVNVYEANAKICL 591
Query: 806 ENGDLPEYNQCQSQLKILYAEGIEGCCME----FSAYHLLC-VILHSNNKRELLSLMSR- 859
EN D E+ QC SQ+K LY + C+E F +Y LL +I +N+ EL+SL+ +
Sbjct: 592 ENSDFIEFGQCLSQIKELYHSISDQSCLENKFEFISYDLLFNLIFIKDNELELISLLPKI 651
Query: 860 LSDKA-KQDKAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYV-EKMRFKAVSC 917
L+D++ ++ +KH + +V NY F +LY T N+ L++ + ++ R +++
Sbjct: 652 LNDESFYSNENIKHTFEIIKSVLENNYCKFNKLYLTCYNMEKYLLEKILNDRFRVYSINA 711
Query: 918 MSRSYRPTVPVSYVAQVLGFT 938
M +SY+P++ ++ + + L F+
Sbjct: 712 MIKSYKPSIHLNLLEKQLSFS 732
Score = 42 (19.8 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 329 TPSFQNRQVSPVQPHYSK----PLEQKTSYNNFQDQHKAAC-P-QGP 369
TP + R + + P+ S P+++ S NN Q+ + P +GP
Sbjct: 399 TPITKRRDIEDLTPYSSPNPSTPIQRNNSNNNRNSQNSPSITPTRGP 445
Score = 41 (19.5 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 340 VQPHYSKPLEQKTSYNNFQDQHKAACPQ 367
VQ H + +Q+ +YNN ++ + PQ
Sbjct: 213 VQQHQHQQQQQQNNYNN---NNQTSSPQ 237
Score = 41 (19.5 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 19/70 (27%), Positives = 28/70 (40%)
Query: 332 FQNRQVSPVQPHYSKPLEQKTSYNNFQDQ--HKAACPQG---PSSQYAIGQQMAPSYQSP 386
F + SP QPH + +Q+ Q Q HK P ++ + + P Y SP
Sbjct: 359 FNSPSSSP-QPHQQQQQQQQQQQQQQQQQQQHKPQQRSNLSTPITKRRDIEDLTP-YSSP 416
Query: 387 PVQTSPQLDN 396
T Q +N
Sbjct: 417 NPSTPIQRNN 426
Score = 40 (19.1 bits), Expect = 7.5e-31, Sum P(3) = 7.5e-31
Identities = 22/87 (25%), Positives = 33/87 (37%)
Query: 194 SSGYSHQTTSWNEGNYT--NYTSHQYSNYTSDTSGAYSSGTAPATSLQYQQQYKQWADYY 251
SS Q EG T + S ++S + S +S Q QQQ +Q +
Sbjct: 331 SSPQQQQKQHHQEGEDTPSSLMSARFSRFNSPSSSPQPHQQQQQQQQQQQQQQQQQQQHK 390
Query: 252 SQ------TEVSCAPGTENLSVASSSN 272
Q T ++ E+L+ SS N
Sbjct: 391 PQQRSNLSTPITKRRDIEDLTPYSSPN 417
Score = 38 (18.4 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 58 NNQSTENGNLSNASYHHEQHTESHV 82
NN + N N +N + ++ + +S++
Sbjct: 59 NNNNNNNNNNNNNNNNNNNNNKSNI 83
Score = 37 (18.1 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 205 NEGNYTNYTSHQYSNYTSDTSGAYSSGTAPATSLQ 239
N N N ++ SN S + P TS++
Sbjct: 68 NNNNNNNNNNNNKSNINKKASPLKKNTMTPRTSIK 102
>CGD|CAL0000561 [details] [associations]
symbol:orf19.6271 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] CGD:CAL0000561 Pfam:PF03399 EMBL:AACQ01000037
InterPro:IPR005062 RefSeq:XP_718858.1 GeneID:3639557
KEGG:cal:CaO19.6271 Uniprot:Q5AAX8
Length = 710
Score = 295 (108.9 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 82/235 (34%), Positives = 124/235 (52%)
Query: 599 KFHLSEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYSGAIALANSP 658
K + +E + KS ++P + + F + NGDA D K+ + + + + + +N+
Sbjct: 295 KSNSTEDDTNKKSKEKP---SNTNNNSFYIDVNGDAPYDPTKKPTTSKILNNSSSSSNNN 351
Query: 659 EERMRRENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGG-----S 713
+ + +K+F + GN + N + K Y A S+ F S
Sbjct: 352 NNNKKTKGDNKKF-KETGNNFQKN--ENKKRQLQEEYDSEARKRARSERFAQISEFKPIS 408
Query: 714 RAVEDIDW-DALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQNSQK---NY 769
ED D+ V GT +++EK Y RLTSAP+P+ VR +VL +L+ V + NY
Sbjct: 409 TYYEDQRRKDSGAVVGTSEQLEKSYFRLTSAPNPAQVRSLKVLHDSLKYVVRKYEESHNY 468
Query: 770 LYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILY 824
Y DQL SIR DLTVQ I+++ T VYE +AR++IEN DL E+NQCQ+QLK LY
Sbjct: 469 SYIIDQLNSIRLDLTVQHIKDEFTVHVYEKNARISIENNDLGEFNQCQAQLKSLY 523
Score = 47 (21.6 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 16/80 (20%), Positives = 34/80 (42%)
Query: 5 NQNQQGSTQNIASSVDP---NSVENRYVVDA-SQSQASSYFPSTTGSGAVSWATHGVNNQ 60
++ Q G QN + ++ ++ E YV Q+ ++ + S G + + NQ
Sbjct: 92 DEGQNGPNQNQLNDLEGRIYDANEEAYVPPRLRQNPPNTAYSSANNFGTLPMTNNNNLNQ 151
Query: 61 STENGNLSNASYHHEQHTES 80
T N +N ++ + T +
Sbjct: 152 DTVGNNQNNTVNNNSESTNN 171
Score = 39 (18.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 166 NSGSYVGPASYSATYYNPGD--YQTAGGYPSSGYSHQTTSWNEGNYTNYTSHQYSNYTSD 223
N +YV P NP + Y +A + + ++ + N+ N ++ +N S+
Sbjct: 114 NEEAYVPPRLRQ----NPPNTAYSSANNFGTLPMTNNN-NLNQDTVGNNQNNTVNN-NSE 167
Query: 224 TSGAYSSGTAPATS 237
++ + +G APA +
Sbjct: 168 STNNFQAGMAPAAA 181
>UNIPROTKB|Q5AAX8 [details] [associations]
symbol:CaO19.6271 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] CGD:CAL0000561 Pfam:PF03399
EMBL:AACQ01000037 InterPro:IPR005062 RefSeq:XP_718858.1
GeneID:3639557 KEGG:cal:CaO19.6271 Uniprot:Q5AAX8
Length = 710
Score = 295 (108.9 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 82/235 (34%), Positives = 124/235 (52%)
Query: 599 KFHLSEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYSGAIALANSP 658
K + +E + KS ++P + + F + NGDA D K+ + + + + + +N+
Sbjct: 295 KSNSTEDDTNKKSKEKP---SNTNNNSFYIDVNGDAPYDPTKKPTTSKILNNSSSSSNNN 351
Query: 659 EERMRRENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGG-----S 713
+ + +K+F + GN + N + K Y A S+ F S
Sbjct: 352 NNNKKTKGDNKKF-KETGNNFQKN--ENKKRQLQEEYDSEARKRARSERFAQISEFKPIS 408
Query: 714 RAVEDIDW-DALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQNSQK---NY 769
ED D+ V GT +++EK Y RLTSAP+P+ VR +VL +L+ V + NY
Sbjct: 409 TYYEDQRRKDSGAVVGTSEQLEKSYFRLTSAPNPAQVRSLKVLHDSLKYVVRKYEESHNY 468
Query: 770 LYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILY 824
Y DQL SIR DLTVQ I+++ T VYE +AR++IEN DL E+NQCQ+QLK LY
Sbjct: 469 SYIIDQLNSIRLDLTVQHIKDEFTVHVYEKNARISIENNDLGEFNQCQAQLKSLY 523
Score = 47 (21.6 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 16/80 (20%), Positives = 34/80 (42%)
Query: 5 NQNQQGSTQNIASSVDP---NSVENRYVVDA-SQSQASSYFPSTTGSGAVSWATHGVNNQ 60
++ Q G QN + ++ ++ E YV Q+ ++ + S G + + NQ
Sbjct: 92 DEGQNGPNQNQLNDLEGRIYDANEEAYVPPRLRQNPPNTAYSSANNFGTLPMTNNNNLNQ 151
Query: 61 STENGNLSNASYHHEQHTES 80
T N +N ++ + T +
Sbjct: 152 DTVGNNQNNTVNNNSESTNN 171
Score = 39 (18.8 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 166 NSGSYVGPASYSATYYNPGD--YQTAGGYPSSGYSHQTTSWNEGNYTNYTSHQYSNYTSD 223
N +YV P NP + Y +A + + ++ + N+ N ++ +N S+
Sbjct: 114 NEEAYVPPRLRQ----NPPNTAYSSANNFGTLPMTNNN-NLNQDTVGNNQNNTVNN-NSE 167
Query: 224 TSGAYSSGTAPATS 237
++ + +G APA +
Sbjct: 168 STNNFQAGMAPAAA 181
>FB|FBgn0038642 [details] [associations]
symbol:Muc91C "Mucin 91C" species:7227 "Drosophila
melanogaster" [GO:0005201 "extracellular matrix structural
constituent" evidence=ISM] [GO:0031012 "extracellular matrix"
evidence=ISM] [GO:0022008 "neurogenesis" evidence=IMP]
EMBL:AE014297 GO:GO:0022008 eggNOG:NOG12793 GO:GO:0031012
GO:GO:0005201 GeneTree:ENSGT00700000104744 RefSeq:NP_650744.1
UniGene:Dm.10760 EnsemblMetazoa:FBtr0083687 GeneID:42246
KEGG:dme:Dmel_CG7709 UCSC:CG7709-RA CTD:42246 FlyBase:FBgn0038642
InParanoid:Q9VE45 OMA:GPYPSAP PhylomeDB:Q9VE45 GenomeRNAi:42246
NextBio:827869 ArrayExpress:Q9VE45 Bgee:Q9VE45 Uniprot:Q9VE45
Length = 950
Score = 161 (61.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 102/408 (25%), Positives = 153/408 (37%)
Query: 5 NQNQQGSTQNIASSVDPNSVENRYVVDASQSQASSYFPSTTGSGAVSWATHGVNNQSTEN 64
N TQ++ SS + + Y + +SSY ++ +S + S+ +
Sbjct: 510 NYGAPSKTQSLGSSGYSSGPSSSYEAPVAPP-SSSYGAPSSSFQPISPPSSSYGAPSSGS 568
Query: 65 GNLSNASYHHEQHTESHVKSLQDXXXXXXXXXXXXXXXXXVAQDYSG-YTSYPNSSDPYA 123
G+ S+ S+ + S + + G Y S P+SS Y+
Sbjct: 569 GS-SSGSFSAAPSSLYSAPSKGSSGGSFQSAPSSSYSAPSASANSGGSYPSAPSSS--YS 625
Query: 124 YGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQ--PISSFQ------NSG-SYVGPA 174
S++ P+ SY P NSG PY P SS+ NSG SY P+
Sbjct: 626 APSSS-SSSGGPYASAPSSSYSAPSSG-SNSGGPYPAAPSSSYSAPSASANSGGSY--PS 681
Query: 175 SYSATYYNPGDYQTAGG-YP---SSGYSHQTTSWNEGN-YTNYTSHQYS--NYTSDTSGA 227
+ S++Y P +GG YP SS YS + S N G Y + S YS + +S++ G
Sbjct: 682 APSSSYSAPSPGSNSGGPYPAAPSSSYSAPSPSANSGGPYASAPSSSYSAPSSSSNSGGP 741
Query: 228 Y-----SSGTAPATSLQYQQQYKQW-ADYYSQTEVSCAPGTENLSVASSSNQVLQPPGVT 281
Y SS +AP++S Y + YS S + G S SSS P +
Sbjct: 742 YAAAPSSSYSAPSSSSSSGGPYPSAPSSSYSAPSSSLSSGGPYPSAPSSSYAAPSPSSNS 801
Query: 282 AG-YPTAHSQPAPIYHXXXXXXXXXXXXXXXXPAATSNGSHDSYWKHGTPSFQNRQVSPV 340
G YP A P+ Y P+ + + SY G PS + S
Sbjct: 802 GGPYPAA---PSNSYSAPIAPPSSSYGAPASGPSPSFSAPSSSY---GAPSTGSGSSS-- 853
Query: 341 QPHYSKPLEQKTSYNNFQDQHKAACPQGPSSQY-AIGQQMAPSYQSPP 387
+S +S++ A P PSS Y A S+ S P
Sbjct: 854 ---FSS---SSSSFSGASSSSSAGYPSAPSSSYGAPSTGSGHSFSSAP 895
>FB|FBgn0085362 [details] [associations]
symbol:Vml "Vitelline membrane-like" species:7227 "Drosophila
melanogaster" [GO:0009950 "dorsal/ventral axis specification"
evidence=IGI] [GO:0060388 "vitelline envelope" evidence=IDA]
[GO:0007305 "vitelline membrane formation involved in
chorion-containing eggshell formation" evidence=ISM] [GO:0008316
"structural constituent of vitelline membrane" evidence=ISM]
[GO:0035805 "egg coat" evidence=ISM] EMBL:AE014298 GO:GO:0009950
GeneTree:ENSGT00700000104744 PROSITE:PS51137 GO:GO:0060388
InterPro:IPR013135 RefSeq:NP_001096866.1 UniGene:Dm.32785
STRING:A8JUV4 EnsemblMetazoa:FBtr0112535 GeneID:5740271
KEGG:dme:Dmel_CG34333 UCSC:CG34333-RA CTD:5740271
FlyBase:FBgn0085362 eggNOG:NOG284187 InParanoid:A8JUV4 OMA:ISKYETI
OrthoDB:EOG4KPRTT GenomeRNAi:5740271 NextBio:20891311 Bgee:A8JUV4
Uniprot:A8JUV4
Length = 578
Score = 158 (60.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 98/399 (24%), Positives = 151/399 (37%)
Query: 106 AQDYSGYTSYPNSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQ 165
A YS + P+ S P A +A P++S P A + AP P S Q
Sbjct: 174 APSYSAPAA-PSYSAPAAPSYSAPAAPSYSAPAAPSYSAP----AAPSYSAPSAPSYSAQ 228
Query: 166 NSGSYVGPA--SYSATYYNPGDYQTAGGYPSSGYSHQTT-SWNEGNYT----NYTSHQYS 218
+ SY PA SY A Y G PS YS S++ +Y+ +Y++ +
Sbjct: 229 KTSSYSAPAAPSYHAPAAPASSYSAPAG-PS--YSAPAAPSYSAPSYSAPASSYSALKAP 285
Query: 219 NYTSDTSGAYSSGTAPATSLQYQQQYKQWADY-YSQTEVSC--APGTENLSV-ASSSNQV 274
+Y++ + +YS+ AP+ S Y A YS AP ++ S A+ S
Sbjct: 286 SYSAPAAPSYSAPAAPSYSSSASPSYSSPASSSYSAPAAPTYSAPKAQSYSAPAAPSYSA 345
Query: 275 LQPPGVTAGYPTAHSQPA-PIYHXXXXXXXXXXXXXXXXPAATSNGSHDSYWKHGTPSFQ 333
P +A +++S PA P Y A+S SY PS+
Sbjct: 346 PAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPASS-----SYSAPAAPSYS 400
Query: 334 NRQVSPVQPHYSKPLEQKTSYNNFQDQHKAACPQGPSSQYAIGQQMAPSYQSP--PVQTS 391
+P P YS P +SY+ +A P PS Y+ APSY +P P ++
Sbjct: 401 ----APAAPSYSAPAS--SSYSAPAAPSYSA-PAAPS--YSA--PAAPSYSAPAAPSYSA 449
Query: 392 PQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTANAAAKPAYIGVSLAKSNEKVVSH 451
P ++ + AS + PKT S ++ PA S S+ +
Sbjct: 450 PASSGYSAARAYSAGSAAPASGYSA--PKTSSGYSAPASSGSPAASSYSAPASSTASSGY 507
Query: 452 ADSRVEPGTFPKSLCGYVERALARCKGDAEIAASQAVMG 490
+ + + +S + +AR G AA A G
Sbjct: 508 SAPASKSSGYARSEMDHQILGMARTAGGYGSAAPSAAYG 546
Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 98/390 (25%), Positives = 150/390 (38%)
Query: 106 AQDYSGYTSYPNSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQ 165
A YS + P+ S P A +A P++S P A + AP P S
Sbjct: 110 APSYSAPAA-PSYSAPAAPSYSAPASSSYSAPAAPSYSAP----AAPSYSAPAAPSYSAP 164
Query: 166 NSGSYVGPA--SYSA----TYYNPG--DYQT--AGGY--PSS-GYSHQTT-SWNEGNYTN 211
S SY PA SYSA +Y P Y A Y P++ YS S++ + +
Sbjct: 165 ASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPSAPS 224
Query: 212 YTSHQYSNYTSDTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSS 271
Y++ + S+Y++ + +Y + APA+S Y A + + + S +SS
Sbjct: 225 YSAQKTSSYSAPAAPSYHAPAAPASS------YSAPAGPSYSAPAAPSYSAPSYSAPASS 278
Query: 272 NQVLQPPGVTAGYPTAHSQPA-PIYHXXXXXXXXX-XXXXXXXPAATSNGSH--DSYWKH 327
L+ P +A ++S PA P Y PAA + + SY
Sbjct: 279 YSALKAPSYSAPAAPSYSAPAAPSYSSSASPSYSSPASSSYSAPAAPTYSAPKAQSYSAP 338
Query: 328 GTPSFQNRQVSPVQPHYSKPLEQKTSYNNFQDQHKAACPQGPS-SQYAIGQQMAP---SY 383
PS+ +P P YS P +SY+ +A P PS S A AP SY
Sbjct: 339 AAPSYS----APAAPSYSAPAS--SSYSAPAAPSYSA-PAAPSYSAPAAPSYSAPASSSY 391
Query: 384 QSP--PVQTSPQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTA-NAAAKPAYIG-V 439
+P P ++P + + P S A P ++ + +A A P+Y
Sbjct: 392 SAPAAPSYSAPAAPSYSAPASSSYSAPAAPSYSAPAAPSYSAPAAPSYSAPAAPSYSAPA 451
Query: 440 SLAKSNEKVVSHADSRVEPG-TFPKSLCGY 468
S S + S + G + PK+ GY
Sbjct: 452 SSGYSAARAYSAGSAAPASGYSAPKTSSGY 481
>FB|FBgn0038492 [details] [associations]
symbol:Mur89F "Mucin related 89F" species:7227 "Drosophila
melanogaster" [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=ISM] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISM] InterPro:IPR002557 Pfam:PF01607
PROSITE:PS50940 SMART:SM00494 EMBL:AE014297 GO:GO:0005576
eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061 GO:GO:0005201
CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625 GO:GO:0006030
GeneTree:ENSGT00700000104174 RefSeq:NP_650611.1 UniGene:Dm.16781
ProteinModelPortal:Q9VEL9 SMR:Q9VEL9 PRIDE:Q9VEL9
EnsemblMetazoa:FBtr0083413 GeneID:42080 KEGG:dme:Dmel_CG4090
UCSC:CG4090-RA CTD:42080 FlyBase:FBgn0038492 InParanoid:Q9VEL9
OMA:QWNNNNQ OrthoDB:EOG46Q59B PhylomeDB:Q9VEL9 GenomeRNAi:42080
NextBio:827084 ArrayExpress:Q9VEL9 Bgee:Q9VEL9 Uniprot:Q9VEL9
Length = 2112
Score = 138 (53.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 68/269 (25%), Positives = 106/269 (39%)
Query: 9 QGSTQNIASSVDPNSVENRYVVDASQSQASSYFPSTTGSGAVSWATHGVNNQSTENGNLS 68
Q STQ+ +S ++ ++ S S +S ST+ S + S ++ + S+ N + S
Sbjct: 224 QTSTQSSQTSYQNSTTSSQQSSSTSSSNSSQSSSSTSSSTSNSSSSQESSTSSSSNQSSS 283
Query: 69 NASYHHEQHTESHVKSLQDXXXXXXXXXXXXXXXXXVAQDYSGYTSYPNSSDPYAYGSTA 128
+S H E +ES + + + +S N S GS
Sbjct: 284 TSSNHQESSSESSNNQESNSGSSSNQESSTSSSSNQGSSSQNAGSSNQNQSS----GSNQ 339
Query: 129 YPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQNSGSYVGPASYSATYYNPGDYQT 188
G N S Q + QNSG+ Q SS QNSGS + S+ G Q+
Sbjct: 340 SSGSSQSSNSNQNSSNNQNQSS-QNSGSN-QSSSSSQNSGS-----NQSS-----GSNQS 387
Query: 189 AGGYPSSGYSHQTTSWNEGNYTNYTSHQYSNYTSDTSGAYSSGTAPA-TSLQYQQQY--- 244
+G SS S+Q++ N+ + N +S SN TS +S S P T + + Y
Sbjct: 388 SGNNQSSS-SNQSSGSNQSSNNNQSSSSNSNQTSSSSQNNSGSNKPVPTECEDENTYIPD 446
Query: 245 -KQWADYY----------SQTEVSCAPGT 262
+ A +Y Q +C PGT
Sbjct: 447 KEDCAKFYRCRQDKDGKLEQVPFTCGPGT 475
Score = 125 (49.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 133/683 (19%), Positives = 229/683 (33%)
Query: 34 QSQASSYFPSTTGSGAVSWATHGVNNQSTENGNLSNASYHHEQHTESHVKSLQDXXXXXX 93
QS +SS + SG S + N S+ N + SN S + Q + ++ S +
Sbjct: 498 QSGSSS---GSNNSGQQSSGSSSNNQGSSNNQSSSNQSSSNNQGSSNNQGSSSNQGSSSN 554
Query: 94 XXXXXXXXXXXVAQDYSGYTSYPNSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQN 153
Q S S N S GS++ G N S G+ N
Sbjct: 555 QGSSSNQGSSS-NQGSSSNQSSSNQSSSSNQGSSSNQGSSSNQGSSSNQSSSSNQGSSSN 613
Query: 154 SGAPY-QPISSFQNSGSYVGPASYSATYYNPGDYQTAGGYPSSGYSHQTTSWNEGNYTNY 212
G+ Q SS Q S S G +S + N G G + G S +S N+G+ ++
Sbjct: 614 QGSSSNQSSSSNQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQSS-NQGSTSSS 672
Query: 213 TSHQYSNYTSDTSGAYSSGTAPATSLQYQQQY----KQWADYYSQTEVSCAPGTENLSVA 268
++ S+ ++++ + + P Q + Y K A +Y E + + G +
Sbjct: 673 SNQSSSSSNNNSTSTQTKPSNPDGECQDTETYLADKKDCARFYRCVE-NGSGGFNKVPFD 731
Query: 269 SSSNQVLQPPGVTAGYPTAHSQPAPIYHXXXXXXXXXXXXXXXXPAATSNGSHD---SYW 325
S V P +PT + +++S GS S
Sbjct: 732 CSPGTVWDPDTKGCNHPTDVQKEQCKAMANGSGSSSSQGSSSNQGSSSSQGSSSNQGSSS 791
Query: 326 KHGTPSFQ----NRQVSPVQPHYSKP---LEQKTSYNNFQDQHK-AACPQGPSSQYAIGQ 377
G+ S Q N+ S Q S Q +S N ++ ++ QG SS
Sbjct: 792 NQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQGSSSSQGSSSNQGSSS 851
Query: 378 QMAPSYQSPPVQTSPQLDNRRVSKLQ-IPTNPRIASNLALGLPKTDKDSSTANAAAKPAY 436
S N+ S Q +N +SN G + SS +++
Sbjct: 852 NQGSSSNQGSSSNQGSSSNQGSSSSQGSSSNEGSSSNQ--GSSSSQGSSSNQGSSSNQGS 909
Query: 437 IGVSLAKSNEKVVSHADSRVEPGTFPKSLCGYVERALARCKGDAEIAASQAVMGEIIK-- 494
+ SN+ S+ S G+ + + + + +++Q K
Sbjct: 910 SSNQGSSSNQGSSSNQGSSSNQGSSSNQSSSSNQSSSNQSSSNQSSSSNQTSSSTTQKPF 969
Query: 495 ----KANSDGTLFSRDWDVEPLFPKPTTE--AVTKDLPTSTPLSALSKNKRSPSRRTKSR 548
K S+ T + + + + TK T P + S + + +
Sbjct: 970 KPAEKCESEETFLADNENCSKFYRCVDNGKGGFTKVSFTCPPNTLWDPEANSCNHPDQIQ 1029
Query: 549 WEPLPEEKPIDKLASSTNEIVKFSGWIHANEKDRKHISGSVSKEDRLNNIKFHLSEQKSA 608
+PL +K + + SS+N S +N SGS S N+ S +
Sbjct: 1030 TKPLKCKKVVSQGGSSSNSTSNSSS--SSNNSGSSSNSGSSSSSSSSNSG----SSSNTG 1083
Query: 609 SKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYSGAIALANSPEERMRRENRS 668
S S S G + + S+S QS +S S + + +N+ + + S
Sbjct: 1084 SSSNSGASSSGGSSNQGSSSNSGSSSGSNSSGNQSTSSSTSSSSSSSNNNNQGSSSSSSS 1143
Query: 669 KRFDRG-QGNRSETNRFKGKNAG 690
+ N SET + G+ G
Sbjct: 1144 SSSSTSSKPNPSETCKVNGQFIG 1166
Score = 67 (28.6 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 5 NQNQQ-GSTQNIASSVDPNSVEN--RYVVDASQSQASSYFPSTT---GSGAVSWATHGVN 58
NQNQ GS Q+ SS NS +N +SQ+ S+ S++ GS S +
Sbjct: 330 NQNQSSGSNQSSGSSQSSNSNQNSSNNQNQSSQNSGSNQSSSSSQNSGSNQSSGSNQSSG 389
Query: 59 NQSTENGNLSNASYHHEQHTES 80
N + + N S+ S + +S
Sbjct: 390 NNQSSSSNQSSGSNQSSNNNQS 411
Score = 61 (26.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 29/134 (21%), Positives = 54/134 (40%)
Query: 562 ASSTNEIVKFSGWIHANEKDRKHISGSVSKEDRLNNIKFHLSEQKSASKSFQRPVKRQRL 621
+S +N + S +N + + S S + NN S S S Q Q
Sbjct: 502 SSGSNNSGQQSSGSSSNNQGSSNNQSS-SNQSSSNN---QGSSNNQGSSSNQGSSSNQGS 557
Query: 622 SADGFKTEDNGDASSDSDKEQSLTSYYSGAIALANSPEERMRRENRSKRFDRGQGNR--S 679
S++ + + G +S+ S QS +S G+ + S + N+S ++G + S
Sbjct: 558 SSNQGSSSNQGSSSNQSSSNQSSSSN-QGSSSNQGSSSNQGSSSNQSSSSNQGSSSNQGS 616
Query: 680 ETNRFKGKNAGTGN 693
+N+ N G+ +
Sbjct: 617 SSNQSSSSNQGSSS 630
Score = 54 (24.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 27/139 (19%), Positives = 50/139 (35%)
Query: 558 IDKLASSTNEIVKFSGWIHANEKDRKHISGSVSKEDRLNN--IKFHLSEQKSASKSFQRP 615
+DK+ E K I + + SG S NN + S +S + Q
Sbjct: 480 VDKVCDLPTEDQKKKCNIQSGSSSGSNNSGQQSSGSSSNNQGSSNNQSSSNQSSSNNQGS 539
Query: 616 VKRQRLSADGFKTEDNGDASSD-SDKEQSLTSYYSGAIALANSPEERMRRENRSKRFDRG 674
Q S++ + + G +S+ S Q +S S + ++S + + S
Sbjct: 540 SNNQGSSSNQGSSSNQGSSSNQGSSSNQGSSSNQSSSNQSSSSNQGSSSNQGSSSNQGSS 599
Query: 675 QGNRSETNRFKGKNAGTGN 693
S +N+ N G+ +
Sbjct: 600 SNQSSSSNQGSSSNQGSSS 618
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 18/92 (19%), Positives = 34/92 (36%)
Query: 603 SEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYSGAIALANSPEERM 662
S S S Q Q S++ + + G +SS +S G+ + S +
Sbjct: 861 SSSNQGSSSNQGSSSSQGSSSNEGSSSNQGSSSSQGSSSNQGSSSNQGSSSNQGSSSNQG 920
Query: 663 RRENRSKRFDRGQG-NRSETNRFKGKNAGTGN 693
N+ ++G N+S ++ N + N
Sbjct: 921 SSSNQGSSSNQGSSSNQSSSSNQSSSNQSSSN 952
Score = 48 (22.0 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 258 CAPGTENLSVASSSNQVLQPPGVTAGYPTA 287
C P T + S+S+ PP T PT+
Sbjct: 1354 CEPATNGTTATSTSSTTTPPPTTTDLPPTS 1383
Score = 47 (21.6 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 17/44 (38%), Positives = 19/44 (43%)
Query: 498 SDGTLFSRDWDVEPLFPKPTTEAVTKDLPTSTPLSALSKNKRSP 541
SD T SR P P T VT TS+P +A S SP
Sbjct: 1239 SDQTSTSR-----PTGPPTTARPVTARPTTSSPTTASSSQTTSP 1277
Score = 47 (21.6 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 515 KPTTEAVTKDLPTSTPLSALSKNKRSPSRRTKSRWEPLP 553
+PTT ++ + TST ++ + PS T +PLP
Sbjct: 1436 QPTTTTLSSETETSTVTTSPESTTQPPSTTTM---KPLP 1471
Score = 46 (21.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 19/94 (20%), Positives = 35/94 (37%)
Query: 602 LSEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLT--SYYSGAIALANSPE 659
+S+ S+S S S + + +SS + S T S SGA + S
Sbjct: 1039 VSQGGSSSNSTSNSSSSSNNSGSSSNSGSSSSSSSSNSGSSSNTGSSSNSGASSSGGSSN 1098
Query: 660 ERMRRENRSKRFDRGQGNRSETNRFKGKNAGTGN 693
+ + S GN+S ++ ++ + N
Sbjct: 1099 QGSSSNSGSSSGSNSSGNQSTSSSTSSSSSSSNN 1132
Score = 45 (20.9 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 516 PTTEAVTKDLPTSTPLSALSKNKRSPSRRTKSRWEPL 552
PTT +V PT+TP+ + +P + + EP+
Sbjct: 1672 PTTTSVPGYNPTTTPIP-VETTTSTPGYKPTTTGEPI 1707
>UNIPROTKB|O60318 [details] [associations]
symbol:MCM3AP "80 kDa MCM3-associated protein" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0006260 "DNA replication" evidence=TAS] [GO:0006606 "protein
import into nucleus" evidence=TAS] Pfam:PF03399 GO:GO:0005829
GO:GO:0005634 GO:GO:0003677 GO:GO:0006260 GO:GO:0006606
InterPro:IPR005062 PDB:4DHX PDBsum:4DHX EMBL:AJ010089 EMBL:AY590469
EMBL:BC104958 EMBL:BC104960 EMBL:AB011144 EMBL:AB005543
IPI:IPI00028954 PIR:T00339 RefSeq:NP_003897.2 UniGene:Hs.389037
ProteinModelPortal:O60318 SMR:O60318 DIP:DIP-31696N IntAct:O60318
MINT:MINT-1180375 STRING:O60318 PhosphoSite:O60318 PaxDb:O60318
PeptideAtlas:O60318 PRIDE:O60318 Ensembl:ENST00000291688
Ensembl:ENST00000397708 GeneID:8888 KEGG:hsa:8888 UCSC:uc002zir.1
CTD:8888 GeneCards:GC21M047655 H-InvDB:HIX0016189 HGNC:HGNC:6946
HPA:HPA021527 MIM:603294 neXtProt:NX_O60318 PharmGKB:PA30692
eggNOG:COG5079 HOGENOM:HOG000113500 HOVERGEN:HBG052431
InParanoid:O60318 OMA:AHQMKVQ OrthoDB:EOG44J2H4 PhylomeDB:O60318
ChiTaRS:MCM3AP GenomeRNAi:8888 NextBio:33379 ArrayExpress:O60318
Bgee:O60318 CleanEx:HS_MCM3AP Genevestigator:O60318
GermOnline:ENSG00000160294 Uniprot:O60318
Length = 1980
Score = 137 (53.3 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 58/238 (24%), Positives = 107/238 (44%)
Query: 769 YLYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIE-------------NGDLPEYN- 814
Y + ++ + IR+D+T Q + + LT + E R I + + N
Sbjct: 720 YDFVWNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENM 779
Query: 815 -QCQSQLKILYAE----GIEGCCME--FSAYHLLCVILHSNNKRELLSLMSRLSDKAKQD 867
+C LK +Y + G+ C E F Y++L S NK ++L + + +
Sbjct: 780 TKCLQSLKEMYQDLRNKGVF-CASEAEFQGYNVLL----SLNKGDILREVQQFHPAVRNS 834
Query: 868 KAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYRPTVP 927
VK A+ AA++S N++ FF+L ++A LN CL+ Y ++R A+ ++ +Y +
Sbjct: 835 SEVKFAVQAFAALNSNNFVRFFKLVQSASYLNACLLHCYFSQIRKDALRALNFAYTVSTQ 894
Query: 928 VSYVAQVLGFTGVSPTNEECEERDSDGLEECVEWLKAHGASLVTDANGEVQLDAKVHL 985
S + + G + +CEE ++L HG +T ++G V+L+ L
Sbjct: 895 RSTIFPLDGVVRML-LFRDCEE--------ATDFLTCHG---LTVSDGCVELNRSAFL 940
Score = 67 (28.6 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 41/164 (25%), Positives = 64/164 (39%)
Query: 10 GSTQNIASSVDPNS-VENRYVVDASQSQASSYFPSTTGSGAVSWATHGVNNQST----EN 64
G TQ SSV P S +E+ A+ +SS TG S + G ++ E
Sbjct: 74 GFTQT--SSVGPFSGLEHTSTFVATSGPSSSSVLGNTGFSFKSPTSVGAFPSTSAFGQEA 131
Query: 65 GNLSNASYHHEQHTESHVKSLQDXXXXXXXXXXXXXXXXXVAQDYSGYT--SYPNSSDPY 122
G + N+ + TE K L++ +Q SG+ S+P SS P
Sbjct: 132 GEIVNSGFGK---TEFSFKPLENAVFKPILGAESEPEKTQ-SQIASGFFTFSHPISSAPG 187
Query: 123 AYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQN 166
++P N ++ +PV + NS + + P S QN
Sbjct: 188 GLAPFSFPQVTSSSATTSNFTFSKPVSS-NNSLSAFTPALSNQN 230
Score = 42 (19.8 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 542 SRRTKSRWEPLPEE-KPIDKLASSTNEIV 569
SR + + EPLP E +P+ L+ + + +V
Sbjct: 677 SRSSADQEEPLPHELRPLPVLSRTMDYLV 705
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 682 NRFKGKNAGTGNLYVRRASALLISKSFD 709
N F GK A ++ RR+ L + FD
Sbjct: 454 NHF-GKIAKVQRIFTRRSKKLAVVHFFD 480
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 38/164 (23%), Positives = 58/164 (35%)
Query: 530 PLSALSKNKRSPSRRTKSRWEPLPEEKPIDKLASSTNEIVKFSGWIHANEKDRKHISGSV 589
P A R S+ EPLP K + + G H +D +S
Sbjct: 262 PFQASKAGVRQGCEEAVSQVEPLPSLMKGLKRKEDQDRSPRRHG--HEPAEDSDPLSRGD 319
Query: 590 SKED----RLNNIKFHLSEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLT 645
D RLN + ++ F+ + RL K E S++SD ++
Sbjct: 320 HPPDKRPVRLNRPRGGTLFGRTIQDVFKSNKEVGRLGNKEAKKETGFVESAESD-HMAIP 378
Query: 646 SYYSGAIALANSP--EERMRRENRSKRFD--RG----QGNRSET 681
+A + P + E+R K+ D RG Q NRSE+
Sbjct: 379 GGNQSVLAPSRIPGVNKEEETESREKKEDSLRGTPARQSNRSES 422
>ZFIN|ZDB-GENE-040715-1 [details] [associations]
symbol:mcm3ap "MCM3 minichromosome maintenance
deficient 3 (S. cerevisiae) associated protein" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
Pfam:PF03399 ZFIN:ZDB-GENE-040715-1 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR005062
GeneTree:ENSGT00530000063781 EMBL:BX255930 EMBL:BX001051
IPI:IPI00608713 Ensembl:ENSDART00000008053 Bgee:F1Q712
Uniprot:F1Q712
Length = 2118
Score = 115 (45.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 51/223 (22%), Positives = 101/223 (45%)
Query: 764 NSQKNYLYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIE-------------NGDL 810
N + Y + ++ + IR+D+T Q + + T + E R I + +
Sbjct: 767 NCRDWYDFVWNRTRGIRKDITQQHLCDPETVSLIEKCTRFHIHCAHHLCQEPMMSFDAKI 826
Query: 811 PEYN--QCQSQLKILYAEGI--EGCC---MEFSAYHLLCVILHSNNKRELLSLMSRLSDK 863
N +C LK +Y + E C EF Y++L + N ++L + + +
Sbjct: 827 NNENMTKCLQSLKEMYQDLATKEVYCPKEAEFRQYNVLVKL----NDGDILREVQQFRKE 882
Query: 864 AKQDKAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSY- 922
++ V A+ V AA++S N++ FF+L A L++C++ Y ++R +A+ ++ ++
Sbjct: 883 IRESPEVTFAVQVFAALNSNNFVRFFKLVSAASYLSSCILHRYFNQVRRQALKILNVAFT 942
Query: 923 ----RPTV-PVSYVAQVLGFTGVSPTNEECEERD---SDGLEE 957
R T+ PV ++L F + E ++ SDG+ E
Sbjct: 943 VGSQRSTIFPVEDFVRMLMFRNATEATEFIQQYGLTVSDGMVE 985
Score = 83 (34.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 118/552 (21%), Positives = 195/552 (35%)
Query: 143 SYPQPVGAYQNSGAPYQPISSFQNSGSYVGPASYSATYYNPGDYQTAGGYPSSGYSHQTT 202
++ Q G Q SG SSF G++ PA + G G P YS T
Sbjct: 64 TFGQTGGLSQGSGQT----SSFSFLGTH--PA-FGQPSLGQGGTLGFGQPPPPSYSQATG 116
Query: 203 SWNEGNYTNYTSHQYSNYTSDTSGAYSSGTAPATSLQYQQQYKQWADYY--SQTEVSCAP 260
+ ++ +Y S +S S T TS Q + Q + + T +S
Sbjct: 117 QTQNSAFGQPSAFSLPSYVSQSSSTSFSSTV--TS---QPSFGQLSGLPVPAATSISSIS 171
Query: 261 G-TENLSVASSSNQV-LQPPGVTAGYPTAHSQPAPIYHXXXXXXXXXXXXXXXXPAATSN 318
G EN + NQ +PP P P P N
Sbjct: 172 GRAEN---PTGGNQFSFKPPNEAVFKPIFSVSPEP-----TSTNMSSASETAGSSKVVDN 223
Query: 319 GSHDSYWKHGTPSFQNRQVSPVQPHYSKPLEQKTSYNNFQDQHKAACPQGPSSQYAIGQQ 378
S S + PS S QP + + S NF Q + G S Q+ Q
Sbjct: 224 SSGGSLFSCVKPSALGFSFS--QPAAAPSVSLSNS--NFS-QKETVGGGGSSIQFTFSQP 278
Query: 379 MAPSYQSPPVQ--TSPQLDNRRVSKLQIPTNPRIAS-------NLALGLPKT----DKDS 425
PS S T+P + LQ ++ ++ + A G+PKT DK
Sbjct: 279 ANPSSSSTSASQPTTPSTFSFTPQSLQPQSDTKVPAFGGTGIGPFAFGVPKTVRTEDKTG 338
Query: 426 STANAAAKPAYIGVSLAKSNEKVVSHADSRVEPGTF-PKSLCGYVERALARCKGDAEIAA 484
++ + A++ + + E + E G P+ +R L R + A
Sbjct: 339 DGQSSGGETAFVSFGMKRKEEPADAAKSDPSETGADGPRQPA---KRPLLRSRVMAG-GL 394
Query: 485 SQAVMGEIIKKANSDGTLFSRDWDV--EPLFPKPTTEAVTKDL-PTSTPLSALSKNKR-S 540
+ M +++K S R+ ++ P P P+++ T L P ++ +S +++
Sbjct: 395 FRVAMSDVLKSKVSP---VKREDNLPERPDPPGPSSDLATALLRPQASLVSKKAEDVSVQ 451
Query: 541 PSRRTKSRWEPLPEEKPIDKLA--SSTNEIVKFSGWI--HANEKD--RKHIS--GSVSK- 591
P +T++ ++ D L S T+ V I + N KD +H G V +
Sbjct: 452 PEPQTRASGRRAARKESTDSLGGLSPTDATVIQCKNIPSNLNRKDLLMQHFGHFGKVLRV 511
Query: 592 --EDRLNNIKFHLSEQKSASKSFQRPVKRQRLSADGF---KTEDNGDASSDSDKEQSLTS 646
+ + N H + SA+K+ ++ QR F K + GD + + + +
Sbjct: 512 YSKPQKNLAVVHFQDHTSAAKAKKKGKLFQRNEIQIFWQRKKQSPGDKPARPSEIKDVIE 571
Query: 647 YYSGAIALANSP 658
A AL SP
Sbjct: 572 DPESASALLQSP 583
>UNIPROTKB|P11414 [details] [associations]
symbol:POLR2A "DNA-directed RNA polymerase II subunit RPB1"
species:10029 "Cricetulus griseus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0006468 "protein
phosphorylation" evidence=ISS] [GO:0004672 "protein kinase
activity" evidence=ISS] InterPro:IPR000684 Pfam:PF05001
PROSITE:PS00115 GO:GO:0003677 GO:GO:0006468 GO:GO:0006366
GO:GO:0003899 GO:GO:0005665 EMBL:M19538 PIR:A27677
ProteinModelPortal:P11414 Uniprot:P11414
Length = 467
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 96/348 (27%), Positives = 142/348 (40%)
Query: 106 AQDYSGYT-SYPNSSDPYAYGSTAYPGXXXXXXXXPNHSY-PQPVGAYQNSGAPYQPISS 163
A D SG++ Y + P GS PG P+ Y P P GA S +P P
Sbjct: 48 ASDASGFSPGYSPAWSPTP-GSPGSPG--------PSSPYIPSPGGAMSPSYSPTSPAYE 98
Query: 164 FQNSGSYVGPA-SYSATYYNPGDYQTAGGY-PSS-GYSHQTTSWNEGNYT-NYTSHQYSN 219
++ G Y + SYS T +P T+ Y P+S YS + S++ + + + TS YS
Sbjct: 99 PRSPGGYTPQSPSYSPT--SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 156
Query: 220 YT---SDTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQ 276
+ S TS +YS T+P+ S Y + YS T S +P + + S S S
Sbjct: 157 TSPSYSPTSPSYSP-TSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 214
Query: 277 P---PGVTAGYPTA--HSQPAPIYHXXXXXXXXXXXXXX-XXPA-ATSNGSHDSYWKHGT 329
P P + PT+ +S +P Y P+ + ++ S+ + T
Sbjct: 215 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 274
Query: 330 PSFQNRQVSPVQPHYS--KPLEQKTS--YNNFQDQHKAACPQ-GPSS-QYAIGQQMAPSY 383
P+ N SP P YS P TS Y+ ++ P PSS Y+ +PSY
Sbjct: 275 PTSPN--YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYS---PSSPSY 329
Query: 384 Q--SPP-VQTSPQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTA 428
SP TSP S PT+P+ + P + K S T+
Sbjct: 330 SPTSPKYTPTSPSYSPS--SPEYTPTSPKYSPTSPKYSPTSPKYSPTS 375
>UNIPROTKB|I3LQ53 [details] [associations]
symbol:I3LQ53 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000684 Pfam:PF05001 PROSITE:PS00115 GO:GO:0003677
GO:GO:0006366 GO:GO:0005665 GeneTree:ENSGT00700000104490
EMBL:FP565284 Ensembl:ENSSSCT00000030016 OMA:YAESDYL Uniprot:I3LQ53
Length = 543
Score = 135 (52.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 96/348 (27%), Positives = 142/348 (40%)
Query: 106 AQDYSGYT-SYPNSSDPYAYGSTAYPGXXXXXXXXPNHSY-PQPVGAYQNSGAPYQPISS 163
A D SG++ Y + P GS PG P+ Y P P GA S +P P
Sbjct: 124 ASDASGFSPGYSPAWSPTP-GSPGSPG--------PSSPYIPSPGGAMSPSYSPTSPAYE 174
Query: 164 FQNSGSYVGPA-SYSATYYNPGDYQTAGGY-PSS-GYSHQTTSWNEGNYT-NYTSHQYSN 219
++ G Y + SYS T +P T+ Y P+S YS + S++ + + + TS YS
Sbjct: 175 PRSPGGYTPQSPSYSPT--SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 232
Query: 220 YT---SDTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQ 276
+ S TS +YS T+P+ S Y + YS T S +P + + S S S
Sbjct: 233 TSPSYSPTSPSYSP-TSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 290
Query: 277 P---PGVTAGYPTA--HSQPAPIYHXXXXXXXXXXXXXX-XXPA-ATSNGSHDSYWKHGT 329
P P + PT+ +S +P Y P+ + ++ S+ + T
Sbjct: 291 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 350
Query: 330 PSFQNRQVSPVQPHYS--KPLEQKTS--YNNFQDQHKAACPQ-GPSS-QYAIGQQMAPSY 383
P+ N SP P YS P TS Y+ ++ P PSS Y+ +PSY
Sbjct: 351 PTSPN--YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYS---PSSPSY 405
Query: 384 Q--SPP-VQTSPQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTA 428
SP TSP S PT+P+ + P + K S T+
Sbjct: 406 SPTSPKYTPTSPSYSPS--SPEYTPTSPKYSPTSPKYSPTSPKYSPTS 451
>UNIPROTKB|F1PJG2 [details] [associations]
symbol:SAC3D1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051298 "centrosome duplication"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] Pfam:PF03399 GO:GO:0005813 GO:GO:0051298
GO:GO:0051225 GO:GO:0005819 InterPro:IPR005062
GeneTree:ENSGT00530000063781 EMBL:AAEX03011643
Ensembl:ENSCAFT00000022212 OMA:RLHRFEV Uniprot:F1PJG2
Length = 407
Score = 131 (51.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 58/217 (26%), Positives = 98/217 (45%)
Query: 771 YKCDQLKSIRQDLTVQRIRNQLTAKVYETH--------ARLAIEN--GDL-PEYNQCQSQ 819
+ D+L+++R DL +Q A V E ARL + G P Q Q Q
Sbjct: 149 FVADRLRAVRLDLALQGADGVEAAAVLEAALAVLLAVVARLGPDGTRGPADPVLLQAQVQ 208
Query: 820 -----LKILYAEGIEGCCMEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHAL 874
L+ YA+G G +A+ L +L++ E L + +L D + A++ AL
Sbjct: 209 EGFGSLRRCYAQGA-GSRPRQAAFQGL-FLLYNLGSVEALHEVLQLPDALRSCPALRRAL 266
Query: 875 AVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYR-P---TVPVSY 930
AV +A GN FRL + P L +C + ++ + R A++ ++R+ P T+P+ +
Sbjct: 267 AVDSAFREGNTARLFRLLRILPYLQSCAVRCHIGRARRGALARLARALSTPKGQTLPLGF 326
Query: 931 VAQVLGFTGVSPTNEECEERDS--DGLEECVEWLKAH 965
+ +L G + C+ DG E V +L+ H
Sbjct: 327 IVHLLALDGPEEARDLCQAHGLPLDGQERVV-FLRGH 362
>FB|FBgn0036203 [details] [associations]
symbol:Muc68D "Mucin 68D" species:7227 "Drosophila
melanogaster" [GO:0016490 "structural constituent of peritrophic
membrane" evidence=ISS] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0008061 "chitin binding" evidence=IEA]
[GO:0006030 "chitin metabolic process" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=ISM] [GO:0005201 "extracellular
matrix structural constituent" evidence=ISM] InterPro:IPR002557
Pfam:PF01607 PROSITE:PS50940 SMART:SM00494 GO:GO:0005576
EMBL:AE014296 eggNOG:NOG12793 GO:GO:0031012 GO:GO:0008061
GO:GO:0005201 CAZy:CBM14 Gene3D:2.170.140.10 SUPFAM:SSF57625
GO:GO:0006030 GeneTree:ENSGT00700000104174 EMBL:AY075323
RefSeq:NP_648504.2 UniGene:Dm.20068 SMR:Q9VTN2 MINT:MINT-900668
STRING:Q9VTN2 EnsemblMetazoa:FBtr0076119 GeneID:39326
KEGG:dme:Dmel_CG6004 UCSC:CG6004-RB CTD:39326 FlyBase:FBgn0036203
InParanoid:Q9VTN2 OMA:STESSQD OrthoDB:EOG4WSTSF GenomeRNAi:39326
NextBio:813085 Uniprot:Q9VTN2
Length = 1514
Score = 137 (53.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 126/692 (18%), Positives = 252/692 (36%)
Query: 5 NQNQQGSTQNIASSVD-PNSVENRYVVDASQSQASSYFPSTTGSGAVSWATHGVNNQSTE 63
N+ G+T + +S+ P+S + +S S++ F +T + S ++ + N ST+
Sbjct: 283 NEPSTGATDDSSSTESLPDSTQE----SSSSSESPVSFELSTEATNESSSSESLPNSSTQ 338
Query: 64 NGNLSN-ASYHHEQHTESHVKSLQ-DXXXXXXXXXXXXXXXXXVAQDYSGYTSYPNSSDP 121
+ + S S+ E T++ +S + ++ + S + +SS
Sbjct: 339 DSSSSTETSFQTESTTDATDESSSTESQPDSTTQESSSSTEGPLSTESSTAVTDQSSSTE 398
Query: 122 YAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQNSGSYVGPASY-SATY 180
+ ST S + +S Q ++ ++S S GP S S+T
Sbjct: 399 SSQDSTTQESSSSTEGPLSTESSTEATNE-SSSTESSQDSTTQESSSSTEGPLSTESSTE 457
Query: 181 YNPGDYQTAGGYPSSGYSHQTTSWNEGNYTNYTSHQYSNYTSDTSGAYSSGTAPATSLQY 240
T S+ + +++S EG + +S + +N +S T + S T ++S
Sbjct: 458 ATNESSSTESSQDST--TQESSSSTEGPLSTESSTEATNESSSTESSQDSTTQESSSSS- 514
Query: 241 QQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQPPGVTAGYPTAHSQPAPIYHXXXX 300
+ + + E S +++ + SS+ P P+ + +
Sbjct: 515 EGPLSTESSTEATNESSSTESSQDSTTQESSSSTESPLSTE---PSTEANESSSTESSQD 571
Query: 301 XXXXXXXXXXXXPAATSNGSHDSYWKHGTPSFQNRQVSPVQPHYSKPLEQKTSYNNFQDQ 360
P +T + + + T S Q+ PL ++S +
Sbjct: 572 STTQESSSSTEDPLSTESSTEATNESSSTESSQDSTTQESSSSTEGPLSTESSTEGSNES 631
Query: 361 HKAACPQGPSSQYAIGQQMAPSYQSPPVQTSPQLDNRRVSKL---QIPTNPRIASNLALG 417
SSQ + Q+ + S +SP + T P + S Q T +S+
Sbjct: 632 SSTE-----SSQDSTTQKSSSSTESP-LSTEPSTEANESSSTESSQDSTTQESSSSTEGP 685
Query: 418 L---PKTDKDSSTANAAAKPAYIGVSLAKSNEKVVSHADSRV-EPGTFPKSLCGYVERAL 473
L P T+ + S++ +++ + S + S + + + + E + S + +
Sbjct: 686 LSTEPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQDSTTQESS 745
Query: 474 ARCKGDAEIAASQAVMGEIIKKANSDGTLFSRDWDVE-PLFPKPTTEAVTKDLPTSTPLS 532
+ + S +++ D T E PL +P+TEA + +ST S
Sbjct: 746 SSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTEPSTEA---NESSSTESS 802
Query: 533 ALSKNKRSPSRRTKSRWEPLPEEKPIDKLASSTNEIVKFSGWIHANEKDRKHISGSVSKE 592
S + S S S PL E + SS+ E + S ++ +S S E
Sbjct: 803 QDSTTQESSS----SSEGPLSTESSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTE 858
Query: 593 DRLNNIKFHLSEQKS---ASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYS 649
+ S+ + +S S + P+ + S +G + ++S DS ++S +S S
Sbjct: 859 ATYESSSTESSQDSTTQESSSSTEGPLSTES-STEGSNESSSTESSQDSTTQESSSSTES 917
Query: 650 GAIALANSPEERMRRENRSKRFDRGQGNRSET 681
++ S E S + Q + S T
Sbjct: 918 -PLSTEPSTEANESSSTESSQDSTTQESSSST 948
>UNIPROTKB|F1N4T6 [details] [associations]
symbol:LOC507750 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051298 "centrosome duplication" evidence=IEA]
[GO:0051225 "spindle assembly" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] Pfam:PF03399
GO:GO:0005813 GO:GO:0051298 GO:GO:0051225 GO:GO:0005819
InterPro:IPR005062 GeneTree:ENSGT00530000063781 EMBL:DAAA02063546
IPI:IPI00701413 Ensembl:ENSBTAT00000002904 Uniprot:F1N4T6
Length = 335
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 58/211 (27%), Positives = 97/211 (45%)
Query: 771 YKCDQLKSIRQDLTVQRIRNQLTAKVYETH--------ARLA--IENGDL-PEYNQCQSQ 819
+ D+L+++R DL +Q + TA V E+ ARL +G + P Q Q Q
Sbjct: 87 FVADRLRAVRLDLALQTASDVETALVLESALAVLLAVVARLGPNATHGPVDPMLLQAQVQ 146
Query: 820 -----LKILYAEGIEGCCMEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHAL 874
L+ YA G G + + L +L++ E L + RL + A++ AL
Sbjct: 147 ESFGSLRRCYALGA-GPHPRQATFQGL-FLLYNLGSVEALHEILRLPAALRSCPALRTAL 204
Query: 875 AVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYR-P---TVPVSY 930
AV +A GN FRL +T P L +C + +V + R A++ ++R+ P T+P+ +
Sbjct: 205 AVDSAFREGNAARLFRLLRTLPYLQSCAVQCHVGRARRGALARLARALSTPKGQTLPLGF 264
Query: 931 VAQVLGFTGVSPTNEECEERDS--DGLEECV 959
+ +L G + + C+ DG E V
Sbjct: 265 MVHLLALDGPNEARDLCQAHGLPLDGQERVV 295
>UNIPROTKB|P24928 [details] [associations]
symbol:POLR2A "DNA-directed RNA polymerase II subunit RPB1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003968 "RNA-directed RNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0003899 "DNA-directed
RNA polymerase activity" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0006366
"transcription from RNA polymerase II promoter"
evidence=IDA;NAS;TAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0005665 "DNA-directed RNA polymerase II, core complex"
evidence=IDA] [GO:0004672 "protein kinase activity" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=TAS] [GO:0006370
"7-methylguanosine mRNA capping" evidence=TAS] [GO:0008380 "RNA
splicing" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0050434
"positive regulation of viral transcription" evidence=TAS]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
[GO:0006468 "protein phosphorylation" evidence=IDA]
Reactome:REACT_216 Reactome:REACT_71 InterPro:IPR000684
InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066
InterPro:IPR007073 InterPro:IPR007075 InterPro:IPR007080
InterPro:IPR007081 InterPro:IPR007083 Pfam:PF00623 Pfam:PF04983
Pfam:PF04990 Pfam:PF04992 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000
Pfam:PF05001 PROSITE:PS00115 SMART:SM00663 Reactome:REACT_116125
EMBL:CH471108 GO:GO:0016032 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 Reactome:REACT_1675 GO:GO:0006468 GO:GO:0006368
Gene3D:2.40.40.20 InterPro:IPR009010 GO:GO:0006367 GO:GO:0000398
Reactome:REACT_1788 GO:GO:0006370 GO:GO:0050434 GO:GO:0006283
Reactome:REACT_1892 EMBL:AC113189 GO:GO:0003899 PDB:2GHQ PDB:2GHT
PDBsum:2GHQ PDBsum:2GHT eggNOG:COG0086 GO:GO:0003968 GO:GO:0005665
HOGENOM:HOG000222975 OMA:KVLPWST KO:K03006 EMBL:X63564 EMBL:X74874
EMBL:X74873 EMBL:X74872 EMBL:X74871 EMBL:X74870 EMBL:BC137231
IPI:IPI00031627 PIR:I38186 PIR:S21054 RefSeq:NP_000928.1
UniGene:Hs.270017 PDB:2LTO PDBsum:2LTO ProteinModelPortal:P24928
SMR:P24928 DIP:DIP-29011N IntAct:P24928 MINT:MINT-156582
STRING:P24928 PhosphoSite:P24928 DMDM:281185484 PaxDb:P24928
PRIDE:P24928 Ensembl:ENST00000322644 GeneID:5430 KEGG:hsa:5430
UCSC:uc002ghf.4 CTD:5430 GeneCards:GC17P007387 H-InvDB:HIX0173727
HGNC:HGNC:9187 HPA:CAB012226 HPA:CAB016388 HPA:CAB022311
HPA:HPA021563 MIM:180660 neXtProt:NX_P24928 PharmGKB:PA33507
HOVERGEN:HBG004339 InParanoid:P24928 OrthoDB:EOG4JWVCM
BindingDB:P24928 ChEMBL:CHEMBL1641353 ChiTaRS:POLR2A
EvolutionaryTrace:P24928 GenomeRNAi:5430 NextBio:21009
ArrayExpress:P24928 Bgee:P24928 CleanEx:HS_POLR2A
Genevestigator:P24928 GermOnline:ENSG00000181222 Uniprot:P24928
Length = 1970
Score = 135 (52.6 bits), Expect = 0.00015, P = 0.00015
Identities = 96/348 (27%), Positives = 142/348 (40%)
Query: 106 AQDYSGYT-SYPNSSDPYAYGSTAYPGXXXXXXXXPNHSY-PQPVGAYQNSGAPYQPISS 163
A D SG++ Y + P GS PG P+ Y P P GA S +P P
Sbjct: 1551 ASDASGFSPGYSPAWSPTP-GSPGSPG--------PSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 164 FQNSGSYVGPA-SYSATYYNPGDYQTAGGY-PSS-GYSHQTTSWNEGNYT-NYTSHQYSN 219
++ G Y + SYS T +P T+ Y P+S YS + S++ + + + TS YS
Sbjct: 1602 PRSPGGYTPQSPSYSPT--SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1659
Query: 220 YT---SDTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQ 276
+ S TS +YS T+P+ S Y + YS T S +P + + S S S
Sbjct: 1660 TSPSYSPTSPSYSP-TSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1717
Query: 277 P---PGVTAGYPTA--HSQPAPIYHXXXXXXXXXXXXXX-XXPA-ATSNGSHDSYWKHGT 329
P P + PT+ +S +P Y P+ + ++ S+ + T
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 330 PSFQNRQVSPVQPHYS--KPLEQKTS--YNNFQDQHKAACPQ-GPSS-QYAIGQQMAPSY 383
P+ N SP P YS P TS Y+ ++ P PSS Y+ +PSY
Sbjct: 1778 PTSPN--YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYS---PSSPSY 1832
Query: 384 Q--SPP-VQTSPQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTA 428
SP TSP S PT+P+ + P + K S T+
Sbjct: 1833 SPASPKYTPTSPSYSPS--SPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
>RGD|1587326 [details] [associations]
symbol:Polr2a "polymerase (RNA) II (DNA directed) polypeptide A"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003899 "DNA-directed RNA polymerase activity" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IEA;ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0006468 "protein
phosphorylation" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000684 InterPro:IPR000722 InterPro:IPR006592
InterPro:IPR007066 InterPro:IPR007073 InterPro:IPR007075
InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083
Pfam:PF00623 Pfam:PF04983 Pfam:PF04990 Pfam:PF04992 Pfam:PF04997
Pfam:PF04998 Pfam:PF05000 Pfam:PF05001 PROSITE:PS00115
SMART:SM00663 RGD:1587326 GO:GO:0003677 GO:GO:0004672 GO:GO:0006366
Gene3D:2.40.40.20 InterPro:IPR009010 GO:GO:0003899 GO:GO:0005665
GeneTree:ENSGT00700000104490 KO:K03006 CTD:5430 OrthoDB:EOG4JWVCM
IPI:IPI00952328 RefSeq:XP_001079162.1 RefSeq:XP_343923.3
UniGene:Rn.163136 Ensembl:ENSRNOT00000068013 GeneID:363633
KEGG:rno:363633 UCSC:RGD:1587326 NextBio:683839 ArrayExpress:D4A5A6
Uniprot:D4A5A6
Length = 1970
Score = 135 (52.6 bits), Expect = 0.00015, P = 0.00015
Identities = 96/348 (27%), Positives = 142/348 (40%)
Query: 106 AQDYSGYT-SYPNSSDPYAYGSTAYPGXXXXXXXXPNHSY-PQPVGAYQNSGAPYQPISS 163
A D SG++ Y + P GS PG P+ Y P P GA S +P P
Sbjct: 1551 ASDASGFSPGYSPAWSPTP-GSPGSPG--------PSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 164 FQNSGSYVGPA-SYSATYYNPGDYQTAGGY-PSS-GYSHQTTSWNEGNYT-NYTSHQYSN 219
++ G Y + SYS T +P T+ Y P+S YS + S++ + + + TS YS
Sbjct: 1602 PRSPGGYTPQSPSYSPT--SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1659
Query: 220 YT---SDTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQ 276
+ S TS +YS T+P+ S Y + YS T S +P + + S S S
Sbjct: 1660 TSPSYSPTSPSYSP-TSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1717
Query: 277 P---PGVTAGYPTA--HSQPAPIYHXXXXXXXXXXXXXX-XXPA-ATSNGSHDSYWKHGT 329
P P + PT+ +S +P Y P+ + ++ S+ + T
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 330 PSFQNRQVSPVQPHYS--KPLEQKTS--YNNFQDQHKAACPQ-GPSS-QYAIGQQMAPSY 383
P+ N SP P YS P TS Y+ ++ P PSS Y+ +PSY
Sbjct: 1778 PTSPN--YSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYS---PSSPSY 1832
Query: 384 Q--SPP-VQTSPQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTA 428
SP TSP S PT+P+ + P + K S T+
Sbjct: 1833 SPTSPKYTPTSPSYSPS--SPEYTPTSPKYSPTSPKYSPTSPKYSPTS 1878
>MGI|MGI:1930089 [details] [associations]
symbol:Mcm3ap "minichromosome maintenance deficient 3 (S.
cerevisiae) associated protein" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=ISO] MGI:MGI:1930089 Pfam:PF03399
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 EMBL:CH466553
InterPro:IPR005062 CTD:8888 eggNOG:COG5079 HOVERGEN:HBG052431
OMA:AHQMKVQ OrthoDB:EOG44J2H4 EMBL:AJ006590 EMBL:BC052452
IPI:IPI00125222 RefSeq:NP_062307.2 UniGene:Mm.30098
ProteinModelPortal:Q9WUU9 SMR:Q9WUU9 STRING:Q9WUU9
PhosphoSite:Q9WUU9 PaxDb:Q9WUU9 PRIDE:Q9WUU9
Ensembl:ENSMUST00000170795 GeneID:54387 KEGG:mmu:54387
GeneTree:ENSGT00530000063781 InParanoid:Q7TS87 NextBio:311220
Bgee:Q9WUU9 Genevestigator:Q9WUU9 GermOnline:ENSMUSG00000001150
Uniprot:Q9WUU9
Length = 1971
Score = 134 (52.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 62/238 (26%), Positives = 106/238 (44%)
Query: 769 YLYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIE-------------NGDLPEYN- 814
Y + ++ + IR+D+T Q + + LT + E R I + + N
Sbjct: 713 YDFVWNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENM 772
Query: 815 -QCQSQLKILYAE----GIEGCCME--FSAYHLLCVILHSNNKRELLSLMSRLSDKAKQD 867
+C LK +Y + G+ C E F Y++L + NK ++L + + +
Sbjct: 773 TKCLQSLKEMYQDLRNKGVF-CASEAEFQGYNVLLNL----NKGDILREVQQFHPDVRNS 827
Query: 868 KAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYRPTVP 927
V A+ AA++S N++ FF+L ++A LN CL+ Y ++R A+ ++ +Y TV
Sbjct: 828 PEVNFAVQAFAALNSNNFVRFFKLVQSASYLNACLLHCYFNQIRKDALRALNVAY--TVS 885
Query: 928 VSYVAQVLGFTGVSPTNEECEERDSDGLEECVEWLKAHGASLVTDANGEVQLDAKVHL 985
+ V GV RDS EE +L HG +T A+G V+L+ L
Sbjct: 886 TQR-STVFPLDGVV---RMLLFRDS---EEATNFLNYHG---LTVADGCVELNRSAFL 933
Score = 60 (26.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 29/123 (23%), Positives = 50/123 (40%)
Query: 173 PASYSATYYNPGDYQTAG----GYPSSGYSHQTTSWNEGNYTNYTSHQYSNYTSDTSGAY 228
P++++ + G YQT G PS + T S + Q ++ + + G++
Sbjct: 12 PSAFAVSSSTTGTYQTKSPFRFGQPSLFGQNSTPS------KSLAFSQVPSFATPSGGSH 65
Query: 229 SSGTAPATSLQYQQQYKQWADY-----YSQTEVSCAPGTENLSVASSSNQVLQPPGVTAG 283
SS + PA L ++ ++ T S PG S S+S+ + P G T G
Sbjct: 66 SS-SLPAFGLTQTSSVGLFSSLESTPSFAATSSSSVPGNTAFSFKSTSSVGVFPSGATFG 124
Query: 284 YPT 286
T
Sbjct: 125 PET 127
Score = 43 (20.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 511 PLFPKP-TTEAVTKDLPTSTPLSALSKNKRS--PSRRTKSRWEPLPEEKP 557
P F P + + V ++ ST S + S P+ S EP P KP
Sbjct: 214 PAFASPLSNQNVEEEKRVSTSAFGSSNSSFSTFPTASPGSLGEPFPANKP 263
Score = 37 (18.1 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 542 SRRTKSRWEPLPEE-KPIDKLASSTNEIV 569
SR + + EPLP E +P L+ + + +V
Sbjct: 670 SRSSADQEEPLPHELRPSAVLSRTMDYLV 698
>TAIR|locus:2082485 [details] [associations]
symbol:SAC3B "AT3G06290" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0034399 "nuclear periphery" evidence=IDA]
Pfam:PF03399 EMBL:CP002686 GO:GO:0034399 InterPro:IPR005062
IPI:IPI01020080 RefSeq:NP_187280.3 UniGene:At.27787 PRIDE:F4JAU2
EnsemblPlants:AT3G06290.1 GeneID:819803 KEGG:ath:AT3G06290
OMA:DHNISKR Uniprot:F4JAU2
Length = 1697
Score = 110 (43.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 35/109 (32%), Positives = 57/109 (52%)
Query: 834 EFSAYH-LLCVILHSNNKREL--LSL-MSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFF 889
EF Y+ LL + H K E LSL ++ ++ + +Q V A V A +GN+I FF
Sbjct: 655 EFRGYYALLKLDKHPGYKVEPSELSLDLANMTPEIRQTSEVLFARNVARACRTGNFIAFF 714
Query: 890 RLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYRPT--VPVSYVAQVLG 936
RL + A L CLM + K+R +A++ + + +PVS ++ +G
Sbjct: 715 RLARKASYLQACLMHAHFSKLRTQALASLHSGLQINQGLPVSDMSNWIG 763
Score = 71 (30.1 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 735 KRYLRLTSAPDPSTVRPEEVLEKALQMVQNS-----QKNYL----YKCDQLKSIRQDLTV 785
K+Y R T+ + +RP +L+ ++ + + +N+L + D++++IR DL +
Sbjct: 523 KKYTR-TAEREAILIRPMPILQNTMEYLLSLLDRPYNENFLGMYNFLWDRMRAIRMDLRM 581
Query: 786 QRIRNQLTAKVYETHARL-AIENGDLPEYNQ 815
Q I NQ + E RL I +L EY +
Sbjct: 582 QHIFNQEAITLLEQMIRLHIIAMHELCEYTK 612
Score = 53 (23.7 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 37/154 (24%), Positives = 64/154 (41%)
Query: 536 KNKRSPS-RRTKSRWEPL-PEEKPIDKLASSTNEIVKFSGWIHANEKDRKHISGSVSK-E 592
K SP+ +RT+S P+ P E+ I + + + + + G A K G +
Sbjct: 373 KTNSSPATKRTRS--PPVYPIEEDIPRNSFPSQDCTE--GEEQARAKRLARFKGELEPIA 428
Query: 593 DRLNNIKFHLSEQKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKEQSLTSYYSGAI 652
DR +I+ S K K+ S + + GDA D + + S G +
Sbjct: 429 DRPVDIQLTKSPVNKTMKPLDN--KQTFNSLESSRDALKGDALPDYENSEQ-PSLIIG-V 484
Query: 653 ALANSPE-ERMRRENRSK--RFDRGQGNRSETNR 683
PE ER RE + ++R G+R++T++
Sbjct: 485 CPDMCPESERGERERKGDLDHYERVDGDRNQTSK 518
Score = 46 (21.3 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 21/85 (24%), Positives = 33/85 (38%)
Query: 116 PNSSDPYAYGSTAY-PGXXXXXXXXPNHSYPQPVGAYQNS----GAPYQP--------IS 162
P S + A+ ++ PG P+ P+ A QN G PY+P I+
Sbjct: 55 PASQNHSAFAGQSFGPGGIRSG---PSIQRAPPLSASQNPQLSIGKPYRPGGVQSVPPIN 111
Query: 163 SFQNSGSYVGPASYSATYYNPGDYQ 187
+ ++ P+ S Y PG Q
Sbjct: 112 RIPSPSAFQNPSPSSGQPYQPGGIQ 136
Score = 46 (21.3 bits), Expect = 0.00081, Sum P(4) = 0.00081
Identities = 45/183 (24%), Positives = 72/183 (39%)
Query: 325 WKHGTPSFQNRQV-SPVQPHYSKPLEQKTSYNNFQDQHKAACPQGPSSQYAIGQQMAPSY 383
W S +N V S P+ EQ T ++F H+ A Q + + + +APS
Sbjct: 263 WMRSPSSAENNPVRSRSNPNQLIHQEQ-TGNSSFPYAHEVAEIQEATRRKS--SAVAPS- 318
Query: 384 QSPPVQTSP---QLDNRRVSKLQIPTNPRIASNLALG----LPKTDKDSSTANAAAKPAY 436
P+ P Q D++R S PT+ + L+ P ++ N A K
Sbjct: 319 -DKPLGDDPILSQHDSQRFSTSP-PTSGTKSYTLSRSSDSQFPGQPSSVNSFNNARK-TN 375
Query: 437 IGVSLAKSNEKVVSHADSRVEPGTFPKSLCGYVE---RA--LARCKGDAEIAASQAVMGE 491
+ ++ V + + +FP C E RA LAR KG+ E A + V +
Sbjct: 376 SSPATKRTRSPPVYPIEEDIPRNSFPSQDCTEGEEQARAKRLARFKGELEPIADRPVDIQ 435
Query: 492 IIK 494
+ K
Sbjct: 436 LTK 438
>UNIPROTKB|G3N1X9 [details] [associations]
symbol:LOC507750 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051298 "centrosome duplication" evidence=IEA]
[GO:0051225 "spindle assembly" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] Pfam:PF03399
GO:GO:0005813 GO:GO:0051298 GO:GO:0051225 GO:GO:0005819
InterPro:IPR005062 GeneTree:ENSGT00530000063781 EMBL:DAAA02063546
OMA:RLHRFEV Ensembl:ENSBTAT00000064082 Uniprot:G3N1X9
Length = 402
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 58/211 (27%), Positives = 97/211 (45%)
Query: 771 YKCDQLKSIRQDLTVQRIRNQLTAKVYETH--------ARLA--IENGDL-PEYNQCQSQ 819
+ D+L+++R DL +Q + TA V E+ ARL +G + P Q Q Q
Sbjct: 144 FVADRLRAVRLDLALQTASDVETALVLESALAVLLAVVARLGPNATHGPVDPMLLQAQVQ 203
Query: 820 -----LKILYAEGIEGCCMEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHAL 874
L+ YA G G + + L +L++ E L + RL + A++ AL
Sbjct: 204 ESFGSLRRCYALGA-GPHPRQATFQGL-FLLYNLGSVEALHEILRLPAALRSCPALRTAL 261
Query: 875 AVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYR-P---TVPVSY 930
AV +A GN FRL +T P L +C + +V + R A++ ++R+ P T+P+ +
Sbjct: 262 AVDSAFREGNAARLFRLLRTLPYLQSCAVQCHVGRARRGALARLARALSTPKGQTLPLGF 321
Query: 931 VAQVLGFTGVSPTNEECEERDS--DGLEECV 959
+ +L G + + C+ DG E V
Sbjct: 322 MVHLLALDGPNEARDLCQAHGLPLDGQERVV 352
>UNIPROTKB|G3MZY8 [details] [associations]
symbol:POLR2A "DNA-directed RNA polymerase" species:9913
"Bos taurus" [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003899
"DNA-directed RNA polymerase activity" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000684 InterPro:IPR000722 InterPro:IPR006592
InterPro:IPR007066 InterPro:IPR007073 InterPro:IPR007075
InterPro:IPR007080 InterPro:IPR007081 InterPro:IPR007083
Pfam:PF00623 Pfam:PF04983 Pfam:PF04990 Pfam:PF04992 Pfam:PF04997
Pfam:PF04998 Pfam:PF05000 Pfam:PF05001 PROSITE:PS00115
SMART:SM00663 GO:GO:0003677 GO:GO:0004672 GO:GO:0006366
Gene3D:2.40.40.20 InterPro:IPR009010 GO:GO:0003899 GO:GO:0005665
GeneTree:ENSGT00700000104490 OMA:KVLPWST EMBL:DAAA02048777
EMBL:DAAA02048778 EMBL:DAAA02048779 EMBL:DAAA02048780
EMBL:DAAA02048781 Ensembl:ENSBTAT00000064788 Uniprot:G3MZY8
Length = 1970
Score = 133 (51.9 bits), Expect = 0.00025, P = 0.00025
Identities = 87/353 (24%), Positives = 128/353 (36%)
Query: 111 GYTSYPNSSDPYAYGSTAYPGXXXXXXXXPNH-SY-PQPVGAYQNSGAPYQPIS-SFQNS 167
G P S PY PG P +Y P+ G Y Y P S S+ +
Sbjct: 1571 GSPGSPGPSSPYIPS----PGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPT 1626
Query: 168 GSYVGPAS--YSATYYNPGDYQTAGGYPSSGYSHQTTSWNEGNYTNYTSHQYSNYT---S 222
P S YS T +P T+ Y + S+ TS +Y+ TS YS + S
Sbjct: 1627 SPSYSPTSPNYSPT--SPSYSPTSPSYSPTSPSYSPTS---PSYSP-TSPSYSPTSPSYS 1680
Query: 223 DTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQP---PG 279
TS +YS T+P+ S Y + YS T S +P + + S S S P P
Sbjct: 1681 PTSPSYSP-TSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1738
Query: 280 VTAGYPTA--HSQPAPIYHXXXXXXXXXXXXXXXXPAATSNGSHDSYWKHGTPSFQ--NR 335
+ PT+ +S +P Y P + + + +PS+ +
Sbjct: 1739 SPSYSPTSPNYSPTSPNY--TPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSLTSP 1796
Query: 336 QVSPVQPHYS--KP--LEQKTSYNNFQDQHKAACPQ-GPSS-QYAIGQQMAPSYQSPPVQ 389
SP P YS P Q +Y + + P P+S +Y +PSY +
Sbjct: 1797 SYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYT---PASPSYSPSSPE 1853
Query: 390 TSPQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTAN--AAAKPAYIGVS 440
+P S PT+P+ + P T K S T+ + P Y S
Sbjct: 1854 YTPSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
>MGI|MGI:98086 [details] [associations]
symbol:Polr2a "polymerase (RNA) II (DNA directed) polypeptide
A" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003899 "DNA-directed RNA polymerase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005665 "DNA-directed RNA
polymerase II, core complex" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016779 "nucleotidyltransferase activity" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000684
InterPro:IPR000722 InterPro:IPR006592 InterPro:IPR007066
InterPro:IPR007073 InterPro:IPR007075 InterPro:IPR007080
InterPro:IPR007081 InterPro:IPR007083 Pfam:PF00623 Pfam:PF04983
Pfam:PF04990 Pfam:PF04992 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000
Pfam:PF05001 PROSITE:PS00115 SMART:SM00663 MGI:MGI:98086
GO:GO:0046872 GO:GO:0003677 GO:GO:0004672 GO:GO:0006366
EMBL:AL603707 Gene3D:2.40.40.20 InterPro:IPR009010 GO:GO:0003899
eggNOG:COG0086 GO:GO:0005665 GeneTree:ENSGT00700000104490
HOGENOM:HOG000222975 OMA:KVLPWST KO:K03006 CTD:5430
HOVERGEN:HBG004339 OrthoDB:EOG4JWVCM ChiTaRS:POLR2A EMBL:M12130
EMBL:M14101 IPI:IPI00136207 PIR:A28490 RefSeq:NP_033115.1
UniGene:Mm.16533 DisProt:DP00181 ProteinModelPortal:P08775
SMR:P08775 DIP:DIP-46369N IntAct:P08775 STRING:P08775
PhosphoSite:P08775 PaxDb:P08775 PRIDE:P08775
Ensembl:ENSMUST00000058470 Ensembl:ENSMUST00000071213 GeneID:20020
KEGG:mmu:20020 UCSC:uc007jrj.1 InParanoid:Q5F298 NextBio:297535
Bgee:P08775 CleanEx:MM_POLR2A Genevestigator:P08775
GermOnline:ENSMUSG00000005198 Uniprot:P08775
Length = 1970
Score = 133 (51.9 bits), Expect = 0.00025, P = 0.00025
Identities = 93/341 (27%), Positives = 139/341 (40%)
Query: 106 AQDYSGYT-SYPNSSDPYAYGSTAYPGXXXXXXXXPNHSY-PQPVGAYQNSGAPYQPISS 163
A D SG++ Y + P GS PG P+ Y P P GA S +P P
Sbjct: 1551 ASDASGFSPGYSPAWSPTP-GSPGSPG--------PSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 164 FQNSGSYVGPA-SYSATYYNPGDYQTAGGY-PSS-GYSHQTTSWNEGNYT-NYTSHQYSN 219
++ G Y + SYS T +P T+ Y P+S YS + S++ + + + TS YS
Sbjct: 1602 PRSPGGYTPQSPSYSPT--SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1659
Query: 220 YT---SDTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQ 276
+ S TS +YS T+P+ S Y + YS T S +P + + S S S
Sbjct: 1660 TSPSYSPTSPSYSP-TSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1717
Query: 277 P---PGVTAGYPTA--HSQPAPIYHXXXXXXXXXXXXXX-XXPA-ATSNGSHDSYWKHGT 329
P P + PT+ +S +P Y P+ + ++ S+ + T
Sbjct: 1718 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYT 1777
Query: 330 PSFQNRQVSPVQPHYS--KPLEQKTSYNNFQDQHKAACPQGPSSQYAIGQQMAPSYQSPP 387
P+ N SP P YS P TS ++ PQ P+ Y +PSY SP
Sbjct: 1778 PTSPN--YSPTSPSYSPTSPSYSPTS-PSYSPSSPRYTPQSPT--YT---PSSPSY-SP- 1827
Query: 388 VQTSPQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTA 428
+SP S PT+P + + P + K S T+
Sbjct: 1828 --SSPSYSP--TSPKYTPTSPSYSPSSPEYTPASPKYSPTS 1864
>UNIPROTKB|I3LCF4 [details] [associations]
symbol:MCM3AP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF03399 GO:GO:0005829 GO:GO:0005634
InterPro:IPR005062 OMA:AHQMKVQ GeneTree:ENSGT00530000063781
EMBL:FP236737 Ensembl:ENSSSCT00000029980 Uniprot:I3LCF4
Length = 1990
Score = 146 (56.5 bits), Expect = 0.00036, Sum P(5) = 0.00036
Identities = 55/218 (25%), Positives = 98/218 (44%)
Query: 769 YLYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIE---------------NGDLPEY 813
Y + ++ + IR+D+T Q + + +T + E R I N +
Sbjct: 723 YDFLWNRTRGIRKDITQQHLCDPVTVSLIEKCTRFHIHCAHFMCEEPMSSFDANINSENM 782
Query: 814 NQCQSQLKILYAE-GIEG--CC--MEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDK 868
+C LK +Y + ++G C EF Y+ V+LH N K ++L + + +
Sbjct: 783 TRCLQSLKEMYQDLRVKGVFCAGEAEFQGYN---VLLHLN-KGDILREVQQFHPAVRNSS 838
Query: 869 AVKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSY-----R 923
VK A+ AA++S N++ FF+L ++A LN CL+ Y ++R A+ ++ +Y R
Sbjct: 839 EVKFAVQAFAALNSNNFVRFFKLVQSASYLNACLLHRYFNQIRRDALRALNVAYTVSPQR 898
Query: 924 PTV-PVSYVAQVLGFTGVSPTNEECEERDSDGLEECVE 960
TV P+ V ++L F + + CVE
Sbjct: 899 STVFPLDSVVRMLLFQDCEEATDVLSCHGLTASDGCVE 936
Score = 50 (22.7 bits), Expect = 0.00036, Sum P(5) = 0.00036
Identities = 37/171 (21%), Positives = 62/171 (36%)
Query: 6 QNQQGSTQNIA----SSVDPNS-VENRYVVDASQSQASSYFPSTTGSGAVSWATHGVNNQ 60
Q+ S Q + S+V P S +E+ A+ SS P G S +
Sbjct: 66 QSHSSSAQTLGVSQTSNVGPFSGLEHTPAFVATSGPTSSCVPGNPGFSFKSPNLGTFPST 125
Query: 61 ST---ENGNLSNASYHHEQHTESHVKSLQDXXXXXXXXXXXXXXXXXVAQDYSGYT--SY 115
ST E G ++++ + TE K L++ +Q SG+ S+
Sbjct: 126 STFGPETGEMASSGFGK---TEFSFKPLENSVFRPISGTESEPEKTQ-SQITSGFFTFSH 181
Query: 116 PNSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQN 166
P SS P ++P N ++ +P N + + P S Q+
Sbjct: 182 PVSSGPGGLAPFSFPQMTSTSATNSNFTFSKP--GNNNLSSAFTPALSNQS 230
Score = 45 (20.9 bits), Expect = 0.00036, Sum P(5) = 0.00036
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 252 SQTEVSCAPGTEN--LSVASSSNQVLQP---PGV 280
S+ +V CA EN +++ S VL P PGV
Sbjct: 360 SKKDVGCAESGENDHVAIPGGSQSVLVPSRLPGV 393
Score = 40 (19.1 bits), Expect = 0.00036, Sum P(5) = 0.00036
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 677 NRSETNRFKGKNAGTGNLYVRRASALLISKSFD 709
+R+ + GK A +Y RR L + FD
Sbjct: 448 DRTSLEKHFGKIAKVQRIYTRRNKKLAVVYFFD 480
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(5) = 0.00036
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 950 RDSDGLEECVEWLKA 964
R D +EE V WL A
Sbjct: 1476 RSEDAVEEDVYWLAA 1490
Score = 39 (18.8 bits), Expect = 0.00044, Sum P(5) = 0.00044
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 597 NIKFHLSEQKSASKSFQRPVKRQRL 621
NI +L+++ S K F + K QR+
Sbjct: 441 NIPDYLNDRTSLEKHFGKIAKVQRI 465
Score = 37 (18.1 bits), Expect = 0.00067, Sum P(5) = 0.00067
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 542 SRRTKSRWEPLPEE-KPIDKLASSTNEIV 569
SR + + EPLP E +P L+ + + +V
Sbjct: 680 SRSSADQEEPLPHELRPSAVLSRTMDYLV 708
>RGD|1308049 [details] [associations]
symbol:Sac3d1 "SAC3 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005819
"spindle" evidence=IEA;ISO] [GO:0015630 "microtubule cytoskeleton"
evidence=ISO] [GO:0051225 "spindle assembly" evidence=IEA;ISO]
[GO:0051298 "centrosome duplication" evidence=IEA;ISO] Pfam:PF03399
RGD:1308049 GO:GO:0005813 GO:GO:0051298 GO:GO:0051225 GO:GO:0005819
InterPro:IPR005062 GeneTree:ENSGT00530000063781 OrthoDB:EOG4HMJ9Z
EMBL:AC120237 IPI:IPI00371474 Ensembl:ENSRNOT00000028509
Uniprot:D3ZT97
Length = 428
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 49/196 (25%), Positives = 89/196 (45%)
Query: 771 YKCDQLKSIRQDLTVQRIRNQLTAKVYETH-ARLAIENGDL-PEYNQCQSQLKILYAEGI 828
+ D+L+++R DL++Q + + A V E A L + + PE + + +L +
Sbjct: 172 FVADRLRAVRLDLSLQGVDDAEAAAVLEPALATLLVVVARMRPEETRGVADPVLLQTQVQ 231
Query: 829 EG------CCMEFSAYHLL------CVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAV 876
EG C A H +L++ E L + +L + ++ ALAV
Sbjct: 232 EGFGSLRRCYARGKAPHPRQAAFQGLFLLYNLGSVEALQEVLQLPAALRACPPLQTALAV 291
Query: 877 RAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYR-P---TVPVSYVA 932
+A NY FRL +T P L +C + ++ R KA+S +SR+ P T+P+ ++
Sbjct: 292 DSAFREDNYARLFRLLRTLPYLQSCAVQEHIGYARRKALSRLSRALSTPRGQTLPLDFIV 351
Query: 933 QVLGFTGVSPTNEECE 948
+L G+ + C+
Sbjct: 352 HLLALDGLQEAQDLCQ 367
>UNIPROTKB|Q16VD3 [details] [associations]
symbol:lig "Protein lingerer" species:7159 "Aedes aegypti"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0007620 "copulation" evidence=ISS]
InterPro:IPR009060 GO:GO:0005737 GO:GO:0007610 PROSITE:PS50030
eggNOG:NOG12793 SUPFAM:SSF46934 GO:GO:0007620 EMBL:CH477597
RefSeq:XP_001653854.1 RefSeq:XP_001653855.1 RefSeq:XP_001653856.1
RefSeq:XP_001653857.1 RefSeq:XP_001653858.1 UniGene:Aae.18497
ProteinModelPortal:Q16VD3 EnsemblMetazoa:AAEL009607-RA
GeneID:5572191 KEGG:aag:AaeL_AAEL009607 VectorBase:AAEL009607
HOGENOM:HOG000046379 OMA:PTHHNIN OrthoDB:EOG4V9S5P PhylomeDB:Q16VD3
InterPro:IPR022166 Pfam:PF12478 Uniprot:Q16VD3
Length = 1250
Score = 143 (55.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 76/286 (26%), Positives = 116/286 (40%)
Query: 12 TQNIASSVDPNSVENRYVVDASQSQASSYFPSTTGSGAVSWATHGVNNQSTENGNLSNAS 71
+Q S+V P+SV + V++ S S+ T + S +T G N S G N S
Sbjct: 659 SQRNTSTVVPSSVSSGVNVNSINSTTST-LEQLTKTDPYSQST-GTNAGS---GGYQNVS 713
Query: 72 YHHEQ--HTESHVKSLQDXXXXXXXXXXXXXXXXXVAQDYSGYTSYPNSSDPYAYGSTAY 129
Y Q T S+ S + Y+SY N S +Y
Sbjct: 714 YSTSQANKTSSYPSSAAPQGYNNSSYSSTQVSTNTYPASSNNYSSY-NQSGVNSYQQ--- 769
Query: 130 PGXXXXXXXXPNHSYPQPVGAYQ-NSGAPYQPISS-FQNSGSYVGPASYSATYYNPGDYQ 187
P PN++ VG N P P+++ N+ S Y ++ Y P Q
Sbjct: 770 PSSNVSSSVVPNNNSTSSVGVSTVNQSNPNLPVNNNVSNNSSSNTNTGYLSSQY-PVS-Q 827
Query: 188 TAGGYPSSGYSHQTTSWNEGNYTNYTSHQ-YSNYTSDTSGAYSSGTAPATSLQYQQQYKQ 246
T+ +PS S+Q +S N T S+ YS TS +SG YS+ ++ + L+ Q
Sbjct: 828 TSSAFPSQ-QSYQNSSQNVYGNTGLNSNTGYSGSTSTSSGQYSNFSS--SKLKDTPVSTQ 884
Query: 247 WADYYSQTEVSCAPGTENLSVASSSNQVLQPPGVTAGYPTAHSQPA 292
+ D S + VS N SV+SSS+ + P + T+ S P+
Sbjct: 885 F-DSVSSSTVSNNNSANNNSVSSSSSSL---PNSSVVSTTSMSSPS 926
Score = 37 (18.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 596 NNIKFHLSEQKSASKSFQRP 615
+NI H + + ++ S QRP
Sbjct: 1208 HNINMHQAMHQDSNSSGQRP 1227
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 126 (49.4 bits), Expect = 0.00047, P = 0.00047
Identities = 77/300 (25%), Positives = 115/300 (38%)
Query: 11 STQNIASSVDPNSVENR-YVVDA-SQSQASSY-FPSTTGSGAVSWATHGVNNQSTENGNL 67
ST SS S +R Y D S ++ SS + S++GSG+ + ++ N+ + +
Sbjct: 25 STSRGGSSYGNRSGSDRDYNRDGGSYNRDSSRDYNSSSGSGSGNGSSS--YNKYPSSSSS 82
Query: 68 SNASYHHEQHTESHVKSLQDXXXXXXXXXXXXXXXXXVAQDYS--GYTSYPNSSDPYAYG 125
S++S + S K QD + S GY S NSS Y
Sbjct: 83 SSSSSSTSSYGPSKGKDFQDSWGSSSTGTTNGYNGSSNGYNSSSNGYNS-SNSSSSYGAS 141
Query: 126 STAYPGXXXXXXXXPNHSYPQPVGAYQNSGAP----Y-QPISSFQNSGSYVGPASYSATY 180
+ Y + S G+Y NSG+ Y +P S++ S Y GP + ++Y
Sbjct: 142 NNGYNNSSGSSSSGSSGS--SNGGSYNNSGSSNSNGYSKPTSNYSYSNGYTGPTTNYSSY 199
Query: 181 YNPGDYQTAGGYPSSGYSHQTTSWNEGNYTNYT--SHQYSNYTSDTSGAYSSGTAPATSL 238
N G Y T S+ S TT+ T+Y S Y TS +S Y + P
Sbjct: 200 SN-G-YSTPPTSTSTSSSSTTTTTTTTPSTSYNGGSTSYGYSTSGSSNGYGGYSQPPIP- 256
Query: 239 QYQQQYKQWADYYSQTEVSCAPGTENLSVASSS--NQVLQPPGV-TAGYPTAHSQPAPIY 295
Y + S V+ A + N SV SS N + G Y T +S + Y
Sbjct: 257 SYDP-----SSVSSYGAVTPASSSYNASVPGSSYGNSTYRSSGYGNQSYATTNSYGSSSY 311
>UNIPROTKB|F1PGS0 [details] [associations]
symbol:POLR2A "DNA-directed RNA polymerase" species:9615
"Canis lupus familiaris" [GO:0003899 "DNA-directed RNA polymerase
activity" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005665 "DNA-directed RNA
polymerase II, core complex" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000684 InterPro:IPR000722
InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007073
InterPro:IPR007075 InterPro:IPR007080 InterPro:IPR007081
InterPro:IPR007083 Pfam:PF00623 Pfam:PF04983 Pfam:PF04990
Pfam:PF04992 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 Pfam:PF05001
PROSITE:PS00115 SMART:SM00663 GO:GO:0003677 GO:GO:0006366
Gene3D:2.40.40.20 InterPro:IPR009010 GO:GO:0003899 GO:GO:0005665
GeneTree:ENSGT00700000104490 OMA:KVLPWST EMBL:AAEX03003616
EMBL:AAEX03003617 Ensembl:ENSCAFT00000026237 Uniprot:F1PGS0
Length = 1969
Score = 130 (50.8 bits), Expect = 0.00051, P = 0.00051
Identities = 87/337 (25%), Positives = 138/337 (40%)
Query: 106 AQDYSGYT-SYPNSSDPYAYGSTAYPGXXXXXXXXPNHSY-PQPVGAYQNSGAPYQPISS 163
A D SG++ Y + P GS PG P+ Y P P GA S +P P
Sbjct: 1551 ASDASGFSPGYSPAWSPTP-GSPGSPG--------PSSPYIPSPGGAMSPSYSPTSPAYE 1601
Query: 164 FQNSGSYVGPA-SYSATYYNPGDYQTAGGY-PSS-GYSHQTTSWNEGNYT-NYTSHQYSN 219
++ G Y + SYS T +P T+ Y P+S YS + S++ + + + TS YS
Sbjct: 1602 PRSPGGYTPQSPSYSPT--SPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSP 1659
Query: 220 YT---SDTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQ 276
+ S TS +YS T+P+ S Y + YS T S +P + + S S S
Sbjct: 1660 TSPSYSPTSPSYSP-TSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1717
Query: 277 PPGVTAGYPTAHSQPAPIYHXXXXXXXXXXXXXXXXPAATSNGSHDSYWKHGTPSFQ--N 334
P + P+ +S +P Y P+ + + +PS+ +
Sbjct: 1718 P-SYSPTSPS-YSPTSPSY--SPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTS 1773
Query: 335 RQVSPVQPHYS--KP-LEQKTSYNNFQDQHKAACPQGPSSQYAIGQQMAPSYQSPPVQTS 391
+P+ P+YS P L+ SY+ + + P+ + Q +PSY SP +S
Sbjct: 1774 PNYTPMSPNYSPTSPNLQLSPSYSPTSPSYSPSSPRY-TPQSPTYTPSSPSY-SP---SS 1828
Query: 392 PQLDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTA 428
P S PT+P + + P + K S T+
Sbjct: 1829 PSYSP--TSPKYTPTSPSYSPSSPEYTPTSPKYSPTS 1863
>ZFIN|ZDB-GENE-041008-78 [details] [associations]
symbol:polr2a "polymerase (RNA) II (DNA directed)
polypeptide A" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003899 "DNA-directed RNA polymerase activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase
activity" evidence=IEA] InterPro:IPR000684 InterPro:IPR000722
InterPro:IPR006592 InterPro:IPR007066 InterPro:IPR007073
InterPro:IPR007075 InterPro:IPR007080 InterPro:IPR007081
InterPro:IPR007083 Pfam:PF00623 Pfam:PF04983 Pfam:PF04990
Pfam:PF04992 Pfam:PF04997 Pfam:PF04998 Pfam:PF05000 Pfam:PF05001
PROSITE:PS00115 SMART:SM00663 ZFIN:ZDB-GENE-041008-78 GO:GO:0003677
GO:GO:0006366 Gene3D:2.40.40.20 InterPro:IPR009010 GO:GO:0003899
GO:GO:0005665 GeneTree:ENSGT00700000104490 EMBL:AL929346
IPI:IPI00608319 Ensembl:ENSDART00000077495 Bgee:F1Q9K4
Uniprot:F1Q9K4
Length = 1965
Score = 128 (50.1 bits), Expect = 0.00084, P = 0.00084
Identities = 88/349 (25%), Positives = 132/349 (37%)
Query: 116 PNSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQN--SGSYVGP 173
P P + G A P PN+S P ++ G Y P S + S SY P
Sbjct: 1564 PTPGSPGSPGP-ASPYIPSPGALSPNYSPTSPAYEPRSPGGGYTPQSPGYSPTSPSY-SP 1621
Query: 174 ASYSATYYNPGDYQTAGGY-PSS-GYSHQTTSWNEGNYT-NYTSHQYSNYT---SDTSGA 227
S S + +P T+ Y P+S YS + S++ + + + TS YS + S TS +
Sbjct: 1622 TSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1681
Query: 228 YSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQP---PGVTAGY 284
YS T+P+ S Y + YS T S +P + + S S S P P +
Sbjct: 1682 YSP-TSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1739
Query: 285 PTA--HSQPAPIYHXXXXXXXXXXXXXXXXPAATSNGSHDSYWKHGTPSFQ--NRQVSPV 340
PT+ +S +P Y P + S + +P++ + SP
Sbjct: 1740 PTSPSYSPTSPNY--TPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPT 1797
Query: 341 QPHYS--KP--LEQKTSYNNFQDQHKAACPQ-GPSS-QYAIGQQMAPSYQ-SPPVQTSPQ 393
P YS P Q +Y + + P P+S +Y +PSY S P T
Sbjct: 1798 SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYT---PTSPSYSPSSPEYTPTS 1854
Query: 394 LDNRRVSKLQIPTNPRIASNLALGLPKTDKDSSTAN--AAAKPAYIGVS 440
S PT+P+ + P T K S T+ + P Y S
Sbjct: 1855 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTS 1903
>DICTYBASE|DDB_G0271916 [details] [associations]
symbol:rtoA "unknown" species:44689 "Dictyostelium
discoideum" [GO:0006972 "hyperosmotic response" evidence=IEP]
[GO:0006906 "vesicle fusion" evidence=IMP] [GO:0006979 "response to
oxidative stress" evidence=IEP] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0048388 "endosomal lumen
acidification" evidence=IMP] [GO:0031210 "phosphatidylcholine
binding" evidence=IDA] [GO:0031154 "culmination involved in
sorocarp development" evidence=IMP] [GO:0005509 "calcium ion
binding" evidence=IDA] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0006944 "cellular membrane fusion" evidence=IDA]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0006885 "regulation of
pH" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0030587 "sorocarp development" evidence=IMP] [GO:0007049 "cell
cycle" evidence=IMP] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] dictyBase:DDB_G0271916 GO:GO:0005524
GO:GO:0005737 GO:GO:0006979 GO:GO:0045595 GenomeReviews:CM000151_GR
EMBL:AAFI02000007 GO:GO:0006972 GO:GO:0048388 GO:GO:0031210
GO:GO:0006874 GO:GO:0006887 eggNOG:NOG12793 GO:GO:0031154
GO:GO:0006906 EMBL:U48298 RefSeq:XP_645420.1
EnsemblProtists:DDB0185120 GeneID:8618200 KEGG:ddi:DDB_G0271916
OMA:CSKETHI ProtClustDB:CLSZ2431310 Uniprot:P54681
Length = 367
Score = 119 (46.9 bits), Expect = 0.00088, P = 0.00088
Identities = 64/286 (22%), Positives = 113/286 (39%)
Query: 7 NQQGS----TQNIASSVDPNSVENRYVVDASQSQAS------SYFPSTTGSGAVSWATHG 56
N QGS +Q+++S VD + + + + S+ S S ST+ SG+ + +
Sbjct: 18 NAQGSIGSSSQSLSSEVDSSDISSSGSNSTASSEGSVSSSSNSGSQSTSNSGSEASGSSN 77
Query: 57 VNNQSTENGNLSNASYHHEQHTESHVKSLQDXXXXXXXXXXXXXXXXXVAQDYSGYTSYP 116
+QST N S AS ++S S + + SG S
Sbjct: 78 SGSQSTSNSG-SEASGSSNSGSQSSTDSSNSGSQGSTGSSNSGSQSSTDSSN-SGSQSST 135
Query: 117 NSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPVGAYQNSGAPYQPISSFQNSGSYVGPASY 176
+SS+ + GST N G+ NSG+ + S NSGS S
Sbjct: 136 DSSNSGSQGSTGSSNSGSESSGSSNSGSEGSTGS-SNSGS--ESSSGSSNSGSESSSGSS 192
Query: 177 SATYYNPGDYQTAGGYPSSGYSHQTTSWNEG--NYTNYTSHQYSNYTSDTS-GAYSSGTA 233
++ + +G SSG S+ + + G N + +S SN S++S G+ +SG+
Sbjct: 193 NSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSESSSGSSNSGSE 252
Query: 234 PATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVASSSNQVLQPPG 279
+ S + + S + +C + LS+ + + ++ G
Sbjct: 253 SSGSSNSGSESSSDSGSSSDGKTTCISFHDTLSINTVDDDEIECTG 298
>MGI|MGI:1913656 [details] [associations]
symbol:Sac3d1 "SAC3 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005819 "spindle" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0051298 "centrosome duplication" evidence=IMP] [GO:0051301
"cell division" evidence=IEA] MGI:MGI:1913656 Pfam:PF03399
GO:GO:0005737 GO:GO:0005813 GO:GO:0051301 GO:GO:0007067
GO:GO:0051298 GO:GO:0051225 GO:GO:0005819 InterPro:IPR005062
eggNOG:NOG296331 HOGENOM:HOG000168632 HOVERGEN:HBG108455
EMBL:AJ131957 EMBL:BC144812 EMBL:BC145789 EMBL:AK075930
IPI:IPI00226152 RefSeq:NP_598439.3 UniGene:Mm.303924
ProteinModelPortal:A6H687 STRING:A6H687 PhosphoSite:A6H687
PRIDE:A6H687 GeneID:66406 KEGG:mmu:66406 UCSC:uc008ghl.1 CTD:29901
InParanoid:A6H687 NextBio:321591 CleanEx:MM_SAC3D1
Genevestigator:A6H687 Uniprot:A6H687
Length = 427
Score = 120 (47.3 bits), Expect = 0.00088, P = 0.00088
Identities = 52/198 (26%), Positives = 91/198 (45%)
Query: 771 YKCDQLKSIRQDLTVQRIRNQLTAKVYETHAR--LAIENGDLPEYN---------QCQSQ 819
+ D+L+++R DL++Q + + A V E LA+ PE Q Q Q
Sbjct: 172 FVADRLRAVRLDLSLQGVDDADAATVLEAALATLLAVVARVRPEETRGAADPVLLQTQVQ 231
Query: 820 -----LKILYAEGIEGCCMEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHAL 874
L+ YA G +G +A+ L +L++ E L + +L + ++ AL
Sbjct: 232 EGFGSLRRCYARG-KGPYPRQAAFQGL-FLLYNLGSVEALQEVLQLPAALRACPPLQAAL 289
Query: 875 AVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYR-P---TVPVSY 930
AV AA N+ FRL +T P L +C + ++ R KA++ +SR+ P T+P+ +
Sbjct: 290 AVDAAFREDNHARLFRLLRTLPYLQSCAVQEHIGYARRKALARLSRALSTPKGQTLPLDF 349
Query: 931 VAQVLGFTGVSPTNEECE 948
+ L G+ + C+
Sbjct: 350 IEHFLALDGLQEARDLCQ 367
>DICTYBASE|DDB_G0271670 [details] [associations]
symbol:DDB_G0271670 species:44689 "Dictyostelium
discoideum" [GO:0005576 "extracellular region" evidence=IEA]
dictyBase:DDB_G0271670 GO:GO:0005576 EMBL:AAFI02000006
ProtClustDB:CLSZ2431310 RefSeq:XP_645495.1
ProteinModelPortal:Q75JC9 EnsemblProtists:DDB0168484 GeneID:8618123
KEGG:ddi:DDB_G0271670 OMA:EITNEEP Uniprot:Q75JC9
Length = 374
Score = 119 (46.9 bits), Expect = 0.00091, P = 0.00091
Identities = 47/295 (15%), Positives = 111/295 (37%)
Query: 29 VVDASQSQASSYFPSTTGSGAVSWATHGVNNQSTENGNLSNASYHHEQHTESHVKSLQDX 88
++D S S +SS S++ S + S ++ ++ S+ + + S++S + S S
Sbjct: 62 ILDTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 121
Query: 89 XXXXXXXXXXXXXXXXVAQDYSGYTSYPNSSDPYAYGSTAYPGXXXXXXXXPNHSYPQPV 148
+ S +S +SS + S++ + S
Sbjct: 122 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 181
Query: 149 GAYQNSGAPYQPISSFQNSGSYVGPASYSATYYNPGDYQTAGGYPSSGYSHQTTSWNEGN 208
+ +S + SS +S S +S S++ + ++ SS S ++S + +
Sbjct: 182 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 241
Query: 209 YTNYTSHQYSNYTSDTSGAYSSGTAPATSLQYQQQYKQWADYYSQTEVSCAPGTENLSVA 268
++ +S S+ +S +S + SS ++ ++S + S + S + + + S +
Sbjct: 242 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 301
Query: 269 SSSNQVLQPPGVTAGYPTAHSQPAPIYHXXXXXXXXXXXXXXXXPAATSNGSHDS 323
SSS+ ++ ++ S + +++S+ S S
Sbjct: 302 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 356
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.125 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 991 950 0.00094 122 3 11 23 0.49 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 628 (67 KB)
Total size of DFA: 473 KB (2220 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 109.49u 0.11s 109.60t Elapsed: 00:00:14
Total cpu time: 109.50u 0.11s 109.61t Elapsed: 00:00:14
Start: Tue May 21 12:01:27 2013 End: Tue May 21 12:01:41 2013