BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001958
(991 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q32NW2|LENG8_XENLA Leukocyte receptor cluster member 8 homolog OS=Xenopus laevis
GN=leng8 PE=2 SV=1
Length = 800
Score = 240 bits (612), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 190/331 (57%), Gaps = 40/331 (12%)
Query: 658 PEERMRRENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGGSRAVE 717
PE+ ++E R+ RF G G + +R +L + D A +
Sbjct: 501 PEKEFKKEKRAARFQHGHGPKK----------------LRMEPLVLQINNMDPS---AAD 541
Query: 718 DIDWDALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQNSQKN---YLYKCD 774
++DWD + + G Q+I K YLRLT APDPSTVRP VL+K+L MV+ KN Y++ C+
Sbjct: 542 NLDWDEIKIVGNSQDITKHYLRLTCAPDPSTVRPVPVLKKSLTMVKADFKNKQDYVFACE 601
Query: 775 QLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGIEGCCME 834
Q+KSIRQDLTVQ IR + T +VYETHAR+A+E GD E+NQCQ+QLK LYAE + G E
Sbjct: 602 QMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQAQLKSLYAENLAGNVGE 661
Query: 835 FSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKT 894
F+AY +L I + N +L + ++ L+ + K D V HAL++R A + NY FF+LY+
Sbjct: 662 FTAYRILYYIF-TKNSGDLTTELAHLTKELKADACVAHALSLREAWALSNYHRFFKLYRQ 720
Query: 895 APNLNTCLMDLYVEKMRFKAVSCMSRSYRPTVPVSYVAQVLGFTGVSPTNEECEERDSDG 954
AP ++ L+D + E+ R A+ M +++RP +PVS+V L F NE
Sbjct: 721 APRMSGYLIDKFAERERKAALKAMIKTFRPLLPVSFVQSELAF-----ANE--------- 766
Query: 955 LEECVEWLKAHGASLVTDANGEVQLDAKVHL 985
EEC +L SLV N Q+D K+ L
Sbjct: 767 -EECQSFLAP--LSLVYAGNDASQIDCKLSL 794
>sp|Q96PV6|LENG8_HUMAN Leukocyte receptor cluster member 8 OS=Homo sapiens GN=LENG8 PE=2
SV=2
Length = 779
Score = 216 bits (550), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 166/281 (59%), Gaps = 27/281 (9%)
Query: 658 PEERMRRENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGGSRAVE 717
PE ++++ R+ RF G R +R +L S + G+
Sbjct: 466 PERELKKQKRAARFQHGHSRR-----------------LRLEPLVLQMSSLESSGA---- 504
Query: 718 DIDWDALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQ---NSQKNYLYKCD 774
D DW L + GTC +I K YLRLT APDPSTVRP VL+K+L MV+ +++Y + C+
Sbjct: 505 DPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKCHWKEKQDYAFACE 564
Query: 775 QLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGIEGCCME 834
Q+KSIRQDLTVQ IR + T +VYETHAR+A+E GD E+NQCQ+QLK LYAE + G E
Sbjct: 565 QMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAENLPGNVGE 624
Query: 835 FSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKT 894
F+AY +L I + N ++ + ++ L+ + K D V HALA+R A + GNY FFRLY
Sbjct: 625 FTAYRILYYIF-TKNSGDITTELAYLTRELKADPCVAHALALRTAWALGNYHRFFRLYCH 683
Query: 895 APNLNTCLMDLYVEKMRFKAVSCMSRSYRPTVPVSYVAQVL 935
AP ++ L+D + ++ R A+ M ++Y VP S + +
Sbjct: 684 APCMSGYLVDKFADRERKVALKAMIKTY--VVPSSLLPLLF 722
>sp|A4QNR8|LENG8_DANRE Leukocyte receptor cluster member 8 homolog OS=Danio rerio GN=leng8
PE=2 SV=1
Length = 839
Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 167/289 (57%), Gaps = 21/289 (7%)
Query: 698 RASALLISKSFDDGGSRAVEDIDWDALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEK 757
R L+++ + D + E + WD + GTCQ+I K YLRLT APDPSTVRP VL K
Sbjct: 561 RTEPLVLNINVFDLPNGTQEGLSWDDCPIVGTCQDITKNYLRLTCAPDPSTVRPVPVLRK 620
Query: 758 ALQMVQ---NSQKNYLYKCDQLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYN 814
+L V+ S ++Y+Y C+Q+KSIRQDLTVQ +R T +VYETHAR+A+E GD E+N
Sbjct: 621 SLIAVKAHWKSNQDYVYACEQMKSIRQDLTVQGVRTDFTVEVYETHARIALEKGDHEEFN 680
Query: 815 QCQSQLKILYAEGIEGCCMEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHAL 874
QCQ+QLK LY + EF+AY L+ I + N +L + + L+ + + D V HAL
Sbjct: 681 QCQTQLKALYKDCPSDNVGEFTAYRLIYYIF-TKNSGDLTTELVYLTTELRADPCVAHAL 739
Query: 875 AVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYRPTVPVSYVAQV 934
+R A + GN+ FFRLY+ AP + L+D +VE+ R A+ + +S+RP+V V YV
Sbjct: 740 ELRTAWALGNFHRFFRLYQKAPRMAAYLIDKFVERERNIALRAILKSFRPSVSVEYVQSS 799
Query: 935 LGFTGVSPTNEECEERDSDGLEECVEWLKAHGASLVTDANGEVQLDAKV 983
L F L+ C+ +L G S + ++D KV
Sbjct: 800 LAFP---------------DLDTCLAFLTGLGISFT--PSDPSKIDCKV 831
>sp|Q1MTP1|THP3_SCHPO THP3 homolog C2A9.11c OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPBC2A9.11c PE=3 SV=1
Length = 395
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 201/351 (57%), Gaps = 51/351 (14%)
Query: 621 LSADGFKTEDNGDASSDSDKEQSLTSYYSG-AIALANSPEERMRRENRSKRFDRGQGNRS 679
++ + + N + DK++ + SG +L + +E ++E R +RF+ G+RS
Sbjct: 57 MNLESLRKLTNAQNTIIEDKKRKVEKPVSGNQFSLLSEEDEVDKKEKRRRRFE--NGSRS 114
Query: 680 ETNRFKGKNAGTGNLYVRRASALLISKSFDDGGSRAVEDIDWDALTVKGTCQEIEKRYLR 739
+ N A + L V + +I +S E+EKRYLR
Sbjct: 115 QNN------AKSEELKVNPENGAIIGRS-----------------------TELEKRYLR 145
Query: 740 LTSAPDPSTVRPEEVLEKALQMVQNSQK---NYLYKCDQLKSIRQDLTVQRIRNQLTAKV 796
LTSAPDP TVRP VL++ L++++ K NY Y CDQ KS+RQDLTVQRI+N+ + V
Sbjct: 146 LTSAPDPDTVRPLPVLKQTLELLKKKWKEEKNYAYICDQFKSLRQDLTVQRIQNEFSVLV 205
Query: 797 YETHARLAIENGDLPEYNQCQSQLKILYAEGIEGCCMEFSAYHLLCVILHSNNKRELLSL 856
YE HAR+A+E GD+ EYNQCQ+QL LY+ GI G EF AY +L +L + N+ E+ SL
Sbjct: 206 YEIHARIALEKGDVGEYNQCQTQLFHLYSFGIPGNTKEFLAYRIL-YMLFTKNRSEMNSL 264
Query: 857 MSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVS 916
++ L ++ K + AV HAL VR+A+++G+Y FF LY APN+ LMDL++E+ R +A+
Sbjct: 265 LANLKEEDKTNAAVTHALEVRSAMATGDYYKFFHLYLVAPNMGGYLMDLFIERERVQAMI 324
Query: 917 CMSRSYRPTVPVSYVAQVLGFTGVSPTNEECEERDSDGLEECVEWLKAHGA 967
M ++YRP++ + ++A L F + +E+CV + ++ A
Sbjct: 325 MMCKAYRPSLTMEFLANTLAF---------------EEMEDCVNFFRSCNA 360
>sp|Q8CBY3|LENG8_MOUSE Leukocyte receptor cluster member 8 homolog OS=Mus musculus
GN=Leng8 PE=1 SV=1
Length = 785
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 167/281 (59%), Gaps = 25/281 (8%)
Query: 658 PEERMRRENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGGSRAVE 717
PE ++++ R+ RF G R +R +L + + G+
Sbjct: 504 PERELKKQKRAARFQHGHSRR-----------------LRLEPLVLQMSNLESSGA---- 542
Query: 718 DIDWDALTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMVQN---SQKNYLYKCD 774
D DW L + GTC +I K YLRLT APDPSTVRP VL+K+L MV++ +++Y + C+
Sbjct: 543 DPDWQELQIVGTCPDITKHYLRLTCAPDPSTVRPVAVLKKSLCMVKSHWKEKQDYAFACE 602
Query: 775 QLKSIRQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGIEGCCME 834
Q+KSIRQDLTVQ IR + T +VYETHAR+A+E GD E+NQCQ+QLK LYAE + G E
Sbjct: 603 QMKSIRQDLTVQGIRTEFTVEVYETHARIALEKGDHEEFNQCQTQLKSLYAENLAGNVGE 662
Query: 835 FSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKT 894
F+AY +L I + N ++ + ++ L+ + K D V HALA+RAA + GNY FFRLY
Sbjct: 663 FTAYRILYYIF-TKNSGDITTELAYLTREMKADPCVAHALALRAAWALGNYHRFFRLYCH 721
Query: 895 APNLNTCLMDLYVEKMRFKAVSCMSRSYRPTVPVSYVAQVL 935
AP ++ L+D + ++ R A+ M ++Y ++ A L
Sbjct: 722 APCMSGYLVDKFADRERKAALKAMIKTYVALHSAAFCAVAL 762
>sp|Q12049|THP3_YEAST Protein THP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=THP3 PE=1 SV=1
Length = 470
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 185/404 (45%), Gaps = 49/404 (12%)
Query: 605 QKSASKSFQRPVKRQRLSADGFKTEDNGDASSDSDKE-QSLTSYYSGAIALANSPEERMR 663
QK +K+ ++ + R A +G+ S+S+ SG +E R
Sbjct: 85 QKRMNKNIKKKLPRVSKKASALSNGVSGNVMSNSNIVGHGAVGSASGWKVEMGGSDELER 144
Query: 664 RENRSKRFDRGQGNRSETNRFKGKNAGTGNLYVRRASALLISKSFDDGGSRAVEDIDWDA 723
R+ R++RF QG + TN N NL + S +D
Sbjct: 145 RKRRAERF--SQGPSATTNSNDNLNEDFANLNAISSK----SHQYDK------------K 186
Query: 724 LTVKGTCQEIEKRYLRLTSAPDPSTVRPEEVLEKALQMV----QNSQKNYLYKCDQLKSI 779
+ V G CQ +EK YLRLTS P+P +RP +L+K ++ Q+ Y Y CDQ KS+
Sbjct: 187 IHVVGRCQTLEKSYLRLTSEPNPDLIRPPNILQKMYCLLMDKYQSKTATYTYLCDQFKSM 246
Query: 780 RQDLTVQRIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILYAEGI--EGCCMEFSA 837
RQDL VQ I N T KVY+THAR+A+ENGDL E+NQCQ+++ L+ + EF
Sbjct: 247 RQDLRVQMIENSFTIKVYQTHARIALENGDLGEFNQCQNRIMALFENPTIPKKSYSEFIC 306
Query: 838 YHLLCVIL---HSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKT 894
Y +L +L + + L L+ S + +D+ VK + GNY F + Y
Sbjct: 307 YSVLYSMLTEDYPSISHLKLKLIDDGSSEILEDEHVKMIFELSDMKLVGNYHYFMKNYLK 366
Query: 895 APNLNTCLMD--LYVEKMRFKAVSCMSRSYRPTVPVSYVAQVLGFTGVSPTNEECEERDS 952
CL++ L +EK+ F + C +SY V + +V F + T E++
Sbjct: 367 LHKFEKCLINSFLNLEKLIFLTIIC--KSYN-QVNLDFVKSEFNFNSIEETTNFLNEQN- 422
Query: 953 DGLEECVEWLKAHGASLVTDANGE---VQL----DAKVHLIQPY 989
L E + L +TD+NG+ +++ +V LIQ Y
Sbjct: 423 --LTEFI--LNKQ----ITDSNGKSSNIKILNTKGCRVQLIQNY 458
>sp|O60318|MCM3A_HUMAN 80 kDa MCM3-associated protein OS=Homo sapiens GN=MCM3AP PE=1 SV=2
Length = 1980
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 122/278 (43%), Gaps = 59/278 (21%)
Query: 744 PDPSTVRPEEVLEKAL-----QMVQNSQKN----YLYKCDQLKSIRQDLTVQRIRNQLTA 794
P P +RP VL + + Q++ + + Y + ++ + IR+D+T Q + + LT
Sbjct: 686 PLPHELRPLPVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRTRGIRKDITQQHLCDPLTV 745
Query: 795 KVYETHARLAIENGDL---------------PEYNQCQSQLKILYAE----GIEGCC--M 833
+ E R I +C LK +Y + G+ C
Sbjct: 746 SLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENMTKCLQSLKEMYQDLRNKGV-FCASEA 804
Query: 834 EFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYK 893
EF Y+ +L S NK ++L + + + VK A+ AA++S N++ FF+L +
Sbjct: 805 EFQGYN----VLLSLNKGDILREVQQFHPAVRNSSEVKFAVQAFAALNSNNFVRFFKLVQ 860
Query: 894 TAPNLNTCLMDLYVEKMRFKAVSCMSRSY-----RPTV-PVSYVAQVLGFTGVSPTNEEC 947
+A LN CL+ Y ++R A+ ++ +Y R T+ P+ V ++L F
Sbjct: 861 SASYLNACLLHCYFSQIRKDALRALNFAYTVSTQRSTIFPLDGVVRMLLF---------- 910
Query: 948 EERDSDGLEECVEWLKAHGASLVTDANGEVQLDAKVHL 985
RD EE ++L HG +T ++G V+L+ L
Sbjct: 911 --RDC---EEATDFLTCHG---LTVSDGCVELNRSAFL 940
>sp|Q9WUU9|MCM3A_MOUSE 80 kDa MCM3-associated protein OS=Mus musculus GN=Mcm3ap PE=2 SV=2
Length = 1971
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 59/278 (21%)
Query: 744 PDPSTVRPEEVLEKAL-----QMVQNSQKN----YLYKCDQLKSIRQDLTVQRIRNQLTA 794
P P +RP VL + + Q++ + + Y + ++ + IR+D+T Q + + LT
Sbjct: 679 PLPHELRPSAVLSRTMDYLVTQIMDQKEGSLRDWYDFVWNRTRGIRKDITQQHLCDPLTV 738
Query: 795 KVYETHARLAIENGDL---------------PEYNQCQSQLKILYAE----GIEGCC--M 833
+ E R I +C LK +Y + G+ C
Sbjct: 739 SLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENMTKCLQSLKEMYQDLRNKGV-FCASEA 797
Query: 834 EFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYK 893
EF Y++L + NK ++L + + + V A+ AA++S N++ FF+L +
Sbjct: 798 EFQGYNVLLNL----NKGDILREVQQFHPDVRNSPEVNFAVQAFAALNSNNFVRFFKLVQ 853
Query: 894 TAPNLNTCLMDLYVEKMRFKAVSCMSRSY-----RPTV-PVSYVAQVLGFTGVSPTNEEC 947
+A LN CL+ Y ++R A+ ++ +Y R TV P+ V ++L F
Sbjct: 854 SASYLNACLLHCYFNQIRKDALRALNVAYTVSTQRSTVFPLDGVVRMLLF---------- 903
Query: 948 EERDSDGLEECVEWLKAHGASLVTDANGEVQLDAKVHL 985
RDS EE +L HG +T A+G V+L+ L
Sbjct: 904 --RDS---EEATNFLNYHG---LTVADGCVELNRSAFL 933
>sp|A6H687|SAC31_MOUSE SAC3 domain-containing protein 1 OS=Mus musculus GN=Sac3d1 PE=1
SV=1
Length = 427
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 771 YKCDQLKSIRQDLTVQRIRNQLTA---------------KVYETHARLAIENGDLPEYNQ 815
+ D+L+++R DL++Q + + A +V R A + P Q
Sbjct: 172 FVADRLRAVRLDLSLQGVDDADAATVLEAALATLLAVVARVRPEETRGAAD----PVLLQ 227
Query: 816 CQSQ-----LKILYAEGIEGCCMEFSAYHLLCVILHSNNKRELLSLMSRLSDKAKQDKAV 870
Q Q L+ YA G +G +A+ L +L++ E L + +L + +
Sbjct: 228 TQVQEGFGSLRRCYARG-KGPYPRQAAFQGL-FLLYNLGSVEALQEVLQLPAALRACPPL 285
Query: 871 KHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLMDLYVEKMRFKAVSCMSRSYRP----TV 926
+ ALAV AA N+ FRL +T P L +C + ++ R KA++ +SR+ T+
Sbjct: 286 QAALAVDAAFREDNHARLFRLLRTLPYLQSCAVQEHIGYARRKALARLSRALSTPKGQTL 345
Query: 927 PVSYVAQVLGFTGVSPTNEECEERDSDGLEECVEWLKAHGASLVTD 972
P+ ++ L DGL+E + +AHG +L D
Sbjct: 346 PLDFIEHFLAL---------------DGLQEARDLCQAHGLTLDKD 376
>sp|A6NKF1|SAC31_HUMAN SAC3 domain-containing protein 1 OS=Homo sapiens GN=SAC3D1 PE=1
SV=2
Length = 404
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 844 ILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYIMFFRLYKTAPNLNTCLM 903
+L++ E L + +L + ++ ALAV AA GN FRL +T P L +C +
Sbjct: 233 LLYNLGSVEALHEVLQLPAALRACPPLRKALAVDAAFREGNAARLFRLLQTLPYLPSCAV 292
Query: 904 DLYVEKMRFKAVSCMSRSYRP----TVPVSYVAQVLGFTGVSPTNEECEERDSDGLEECV 959
+V R +A++ +R++ T+P+ ++ +L DGL E
Sbjct: 293 QCHVGHARREALARFARAFSTPKGQTLPLGFMVNLLAL---------------DGLREAR 337
Query: 960 EWLKAHGASL 969
+ +AHG L
Sbjct: 338 DLCQAHGLPL 347
>sp|P46674|SAC3_YEAST Nuclear mRNA export protein SAC3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SAC3 PE=1 SV=2
Length = 1301
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 98/247 (39%), Gaps = 52/247 (21%)
Query: 747 STVRPEEVLEKALQMVQNSQKNYL-----YKCDQLKSIRQDLTVQ--------------- 786
S VRP +L K L + ++ L + D+++SIRQD T Q
Sbjct: 253 SDVRPPHILVKTLDYIVDNLLTTLPESEGFLWDRMRSIRQDFTYQNYSGPEAVDCNERIV 312
Query: 787 RIRNQLTAKVYETHARLAIENGDLPEYNQCQSQLKILY--AEGIEGCC---MEFSAYHLL 841
RI + + +++ +++ +L + ++ L +Y G C EF AY LL
Sbjct: 313 RIHLLILHIMVKSNVEFSLQQ-ELEQLHKSLITLSEIYDDVRSSGGTCPNEAEFRAYALL 371
Query: 842 CVILHSNNKRELLSLMSRLSDKAKQDKAVKHALAVRAAVSSGNYI--------------- 886
I + RL QDK V+ AL R +S+ Y
Sbjct: 372 SKIRDPQYDENI----QRLPKHIFQDKLVQMALCFRRVISNSAYTERGFVKTENCLNFYA 427
Query: 887 MFFRLYK--TAPNLNTCLMDLYVEKMRFKAVSCMS----RSYRPTVPVSYVAQVLGFTGV 940
FF+L + + P L + +++ +RF A+ +S + ++P +P Y+ +L F
Sbjct: 428 RFFQLMQSPSLPLLMGFFLQMHLTDIRFYALRALSHTLNKKHKP-IPFIYLENMLLFNNR 486
Query: 941 SPTNEEC 947
E C
Sbjct: 487 QEIIEFC 493
>sp|P17931|LEG3_HUMAN Galectin-3 OS=Homo sapiens GN=LGALS3 PE=1 SV=5
Length = 250
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 110 SGYTSYPNSSDPYAYGSTAYPGYYSSYQQQPNHSYPQPVGAYQNSGAPYQPISSFQNSGS 169
+G YP +S P AY A PG Y Q P +YP GAY + AP G
Sbjct: 31 AGAGGYPGASYPGAYPGQAPPGAYPG--QAPPGAYPGAPGAYPGAPAP----------GV 78
Query: 170 YVGPASYSATYYNPGDYQTAGGYPSSG 196
Y GP S Y + G G YP++G
Sbjct: 79 YPGPPSGPGAYPSSGQPSATGAYPATG 105
>sp|P16110|LEG3_MOUSE Galectin-3 OS=Mus musculus GN=Lgals3 PE=1 SV=3
Length = 264
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 114 SYPNSSDPYAYGSTAYPGYYSSYQQQPNHSYPQPV--GAYQNSGAPYQPISSFQNSGSYV 171
+YP + P AY A PG Y Q P +YP P GAY AP G+Y
Sbjct: 43 AYPGQAPPGAYPGQAPPGAYPG--QAPPSAYPGPTAPGAYPGPTAP----------GAYP 90
Query: 172 G---PASYSATYYNPGDY-QTAGGYPSSG 196
G P ++ PG Y Q +GGYP++G
Sbjct: 91 GQPAPGAFPGQPGAPGAYPQCSGGYPAAG 119
>sp|P08699|LEG3_RAT Galectin-3 OS=Rattus norvegicus GN=Lgals3 PE=1 SV=4
Length = 262
Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 111 GYTSYPNSSDPYAYGSTAYPGYYSSYQQQPNHSYPQPVG--AYQNSGAPYQ---PISSFQ 165
G YP +S P AY A PG Y Q P +YP P G AY AP P +
Sbjct: 31 GAGGYPGASYPGAYPGQAPPGGYPG--QAPPSAYPGPTGPSAYPGPTAPGAYPGPTAPGA 88
Query: 166 NSGSYVGPASYSATYYNPGDYQTA-GGYPSSG 196
G GP +Y + PG Y +A G YP++G
Sbjct: 89 FPGQPGGPGAYPSA---PGAYPSAPGAYPATG 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.124 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 376,327,531
Number of Sequences: 539616
Number of extensions: 16423230
Number of successful extensions: 46801
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 686
Number of HSP's that attempted gapping in prelim test: 43400
Number of HSP's gapped (non-prelim): 2703
length of query: 991
length of database: 191,569,459
effective HSP length: 127
effective length of query: 864
effective length of database: 123,038,227
effective search space: 106305028128
effective search space used: 106305028128
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)