Query 001959
Match_columns 991
No_of_seqs 245 out of 1408
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 06:20:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001959.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001959hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ols_A Phosphoenolpyruvate syn 100.0 1.3E-47 4.3E-52 468.9 27.2 293 671-990 3-336 (794)
2 1vbg_A Pyruvate,orthophosphate 100.0 2.3E-39 8E-44 396.6 13.5 247 671-990 3-342 (876)
3 1kbl_A PPDK, pyruvate phosphat 100.0 1.4E-38 4.9E-43 389.6 13.8 241 672-990 2-338 (873)
4 1h6z_A Pyruvate phosphate diki 100.0 2.5E-38 8.7E-43 386.4 11.2 269 671-990 4-367 (913)
5 2x0s_A Pyruvate phosphate diki 100.0 1.3E-34 4.3E-39 358.0 18.9 270 671-990 4-367 (913)
6 3t05_A Pyruvate kinase, PK; te 95.7 0.011 3.8E-07 70.5 7.0 91 535-631 503-595 (606)
7 2e28_A Pyruvate kinase, PK; al 95.0 0.01 3.5E-07 70.8 3.2 96 533-634 482-579 (587)
8 2ols_A Phosphoenolpyruvate syn 94.6 0.0086 2.9E-07 73.9 1.3 98 533-637 364-466 (794)
9 1h6z_A Pyruvate phosphate diki 93.5 0.043 1.5E-06 68.3 4.5 97 533-634 424-531 (913)
10 1vbg_A Pyruvate,orthophosphate 93.3 0.026 8.8E-07 70.3 2.0 99 534-637 400-511 (876)
11 1kbl_A PPDK, pyruvate phosphat 92.6 0.028 9.5E-07 69.9 0.9 99 533-636 395-506 (873)
12 2x0s_A Pyruvate phosphate diki 91.1 0.089 3.1E-06 65.9 3.0 69 534-607 425-497 (913)
13 1zym_A Enzyme I; phosphotransf 90.5 0.064 2.2E-06 57.7 0.9 76 558-638 152-231 (258)
14 2wqd_A Phosphoenolpyruvate-pro 85.7 0.41 1.4E-05 57.0 3.5 76 558-638 154-233 (572)
15 2hwg_A Phosphoenolpyruvate-pro 84.5 0.39 1.3E-05 57.2 2.7 76 558-638 152-231 (575)
16 2c3v_A Alpha-amylase G-6; carb 51.6 11 0.00036 35.1 3.6 35 30-66 52-87 (102)
17 2laa_A Beta/alpha-amylase; SBD 49.3 15 0.00052 34.2 4.3 36 30-67 47-83 (104)
18 2la2_A Cecropin, papiliocin; a 26.8 17 0.00058 27.8 0.5 10 191-200 11-20 (38)
19 4e5s_A MCCFLIKE protein (BA_56 21.9 2E+02 0.0069 31.5 8.3 104 531-636 190-326 (331)
No 1
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=100.00 E-value=1.3e-47 Score=468.91 Aligned_cols=293 Identities=25% Similarity=0.367 Sum_probs=235.6
Q ss_pred ccccccccccCc---ccccHHHHHHHHHHhcCC-CcccCCCceeeChhhHHHHHhhhchHHHHHHHHHHHhhcCCCChHH
Q 001959 671 GRYAITSDEFTG---ELVGAKSRNIAYLKGKVP-SWIGIPTSVALPFGVFEKVLSDNINQAVAEKLQILKQKLGEEDHSA 746 (991)
Q Consensus 671 ~~~vl~l~e~~~---~~vGgKAanLa~L~~~~p-~g~~VP~GfvIpfgafe~~L~~~~n~~L~~~I~~l~~~l~~~d~~~ 746 (991)
++|+++|++.+. .++|||++||++|.+.++ .|++||+||+||+++|++|++.+ ++++.|...++.++..+...
T Consensus 3 ~~~v~~~~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~~---~l~~~i~~~l~~l~~~~~~~ 79 (794)
T 2ols_A 3 DNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDVEDVAE 79 (794)
T ss_dssp -CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTGG---GHHHHHHHHHHSCCTTSHHH
T ss_pred CCEEEECCcCChhhcccCCHHHHHHHHHHHHHhhCCCCCCCEEEECHHHHHHHHHhC---ChHHHHHHHHHhhcccCHHH
Confidence 568999998764 789999999999986432 58999999999999999999987 78888988888887777654
Q ss_pred H----HHHHHHHHcCCCcHHHHHHHHHHHHccC------------------CCC--CCCCCcc-------hHHHHHHHHH
Q 001959 747 L----REIRETVLQMKAPNQLVQELKTEMKSSG------------------MPW--PGDEGEQ-------RWEQAWMAIK 795 (991)
Q Consensus 747 L----~~Ir~~I~~~~lP~eL~~eL~~a~~ssg------------------~~~--~g~~G~~-------~~e~l~~AIK 795 (991)
| .++|++|++.++|+++.++|.++++..+ .+. .+|+|++ ++++++.|||
T Consensus 80 l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~g~~~l~~Aik 159 (794)
T 2ols_A 80 LARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAMH 159 (794)
T ss_dssp HHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccccccCceEEEecCCChhhhhhhhhhhhhhhhhcCCCHHHHHHHHH
Confidence 4 7899999999999999999988875421 112 3456654 5899999999
Q ss_pred HHHHcCCChhHHHHHHhcCCCcccccceeEEEEeeccC--eeEEEEeCCCCCCCCCeEEEEEeccCCccccccccCCcee
Q 001959 796 KVWASKWNERAFFSTRRVKLDHEYLCMAVLVQEIINAD--YAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALS 873 (991)
Q Consensus 796 ~VWAS~fseRA~~YRr~~Gi~~~~v~MAVLVQeMV~ad--~SGVlfT~nP~tgd~~~i~Ieav~GLGE~LVsG~~Gtpd~ 873 (991)
+||||+||+||+.||+.+|++++++.|||+||+||+++ .|||+||+||.||+++.++|+++|||||.||+|.+ +|+.
T Consensus 160 ~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~vV~G~~-tpd~ 238 (794)
T 2ols_A 160 HVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAV-NPDE 238 (794)
T ss_dssp HHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHHHHHTSS-CCEE
T ss_pred HHHHhcCCHHHHHHHHHcCCChHHhCceEEEEEcccCCceeEEEEEeCCCCCCCCceEEEEeccCCCceeecCCc-CCcE
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999987 8999
Q ss_pred EEEecCCCC--CccccCCCCCccccccceeEEEecCCCCCccccccCCcccccccCchhhHhhhcccCCcccCcccchHH
Q 001959 874 FVCKKNDLK--YPRVLGYPSKPIGLFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEKVVLDYSSDRLITDGHFQQS 951 (991)
Q Consensus 874 f~v~K~~~~--~~~vl~~~sk~ig~~~~~~~i~~s~snGedle~~agaGl~~~v~~~~~~~~~vdys~~p~LtD~~~r~~ 951 (991)
|.++|.+.. ...++ .+.++.| +..+++.. +++ .+|.+..+++++..+ +.++|+|++
T Consensus 239 ~~v~kp~l~~~~~~i~---~~~~~~k-~~~~~~~~--~~~------~g~~~~~~~~p~~~~------~~~~L~d~~---- 296 (794)
T 2ols_A 239 FYVFKPTLKAGKPAIL---RKTMGSK-HIKMIFTD--KAE------AGKSVTNVDVPEEDR------NRFSITDEE---- 296 (794)
T ss_dssp EEEEHHHHHTTSCCEE---EEECCCC-CEEEEECS--CCS------SSTTEEEEECCHHHH------TSCSSCHHH----
T ss_pred EEEeccccccCCccee---eeecccc-ceeEEecc--ccc------CCCeeEEEeCCHHHh------cCCCCCHHH----
Confidence 999983210 01222 2233332 23344432 111 123245667776544 689999988
Q ss_pred HHHHHHHHHHHHHHHcCCceEEEEEEECC--eEEEEeeccC
Q 001959 952 ILSSIARAGCEIEELFGSAQDIEGVVRDG--KIYVVQTRPQ 990 (991)
Q Consensus 952 ll~~La~lg~~IE~~fG~PQDIEwai~dg--~LyILQaRP~ 990 (991)
+.+|++++..||++||.|||||||++++ +|||||+||+
T Consensus 297 -~~~L~~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~ 336 (794)
T 2ols_A 297 -ITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPE 336 (794)
T ss_dssp -HHHHHHHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred -HHHHHHHHHHHHHHcCCCeEEEEEEECCCCeEEEEEecCc
Confidence 6899999999999999999999999976 9999999996
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=100.00 E-value=2.3e-39 Score=396.64 Aligned_cols=247 Identities=17% Similarity=0.199 Sum_probs=188.4
Q ss_pred ccccccc----cccC---cccccHHHHHHHHHHhcCCCcccCCCceeeChhhHHHHHhhh--chHHHHHHHHHHHhhcCC
Q 001959 671 GRYAITS----DEFT---GELVGAKSRNIAYLKGKVPSWIGIPTSVALPFGVFEKVLSDN--INQAVAEKLQILKQKLGE 741 (991)
Q Consensus 671 ~~~vl~l----~e~~---~~~vGgKAanLa~L~~~~p~g~~VP~GfvIpfgafe~~L~~~--~n~~L~~~I~~l~~~l~~ 741 (991)
.+||++| ++.+ ..++|||++||++|.+ .|+|||+||+||+++|++|++.+ ..++++++|...++.++.
T Consensus 3 ~~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (876)
T 1vbg_A 3 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMAS---IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEE 79 (876)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHH
T ss_pred CcEEEECCccccccCccccccCcHHHHHHHHHHH---CCCCCCCeEEECHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 3578888 6654 4799999999999998 78999999999999999999876 234566666554443221
Q ss_pred ------CChH-------------HHHHHHHHHHcCCCcHHHHHHHHHH---------HHc---------cCCC-------
Q 001959 742 ------EDHS-------------ALREIRETVLQMKAPNQLVQELKTE---------MKS---------SGMP------- 777 (991)
Q Consensus 742 ------~d~~-------------~L~~Ir~~I~~~~lP~eL~~eL~~a---------~~s---------sg~~------- 777 (991)
++.+ .+..++++|+++.+|+++.++|.++ ++. .+.+
T Consensus 80 ~~~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~~~vr~~~f~~~ 159 (876)
T 1vbg_A 80 YMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEK 159 (876)
T ss_dssp HHTCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred hhccccCCCcccccceecccccccchhHHHHHHcCCCCHHHHHHHHHhhccchHHHHHHHHHhhccceeeecChhhHHHH
Confidence 1211 1235688899999999999888752 221 0110
Q ss_pred --------------------CC----CCCC-----------cchHHHHHHHHHHHHHcCCChhHHHHHHhcCCCcccccc
Q 001959 778 --------------------WP----GDEG-----------EQRWEQAWMAIKKVWASKWNERAFFSTRRVKLDHEYLCM 822 (991)
Q Consensus 778 --------------------~~----g~~G-----------~~~~e~l~~AIK~VWAS~fseRA~~YRr~~Gi~~~~v~M 822 (991)
++ +|.| +..+++|+.|||+||||+||+||+.||+.+|++++ .+|
T Consensus 160 ~~~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~~~gi~~~-~~~ 238 (876)
T 1vbg_A 160 LEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGL-RGT 238 (876)
T ss_dssp HHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCC-CCC
T ss_pred HHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCHHHHHHHHhcCCCch-hCc
Confidence 00 0001 11368999999999999999999999999999998 799
Q ss_pred eeEEEEeeccC-----eeEEEEeCCCCCCCCCeEEEEEeccCCccccccccCCceeEEEecCCCCCccccCCCCCccccc
Q 001959 823 AVLVQEIINAD-----YAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFVCKKNDLKYPRVLGYPSKPIGLF 897 (991)
Q Consensus 823 AVLVQeMV~ad-----~SGVlfT~nP~tgd~~~i~Ieav~GLGE~LVsG~~Gtpd~f~v~K~~~~~~~vl~~~sk~ig~~ 897 (991)
||+||+||.++ .|||+||+||.||+++..-.-++.|+||.||+|.+ +|+.|.+ +
T Consensus 239 AV~VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~-tPd~~~~----------l---------- 297 (876)
T 1vbg_A 239 AVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIR-TPEDLDA----------M---------- 297 (876)
T ss_dssp CEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSC-CCEETHH----------H----------
T ss_pred eEEEEEeccCCCCCCeeEEEEEeCCCCCCCcccceEEEEecCchhhhcCCc-Ccchhhh----------h----------
Confidence 99999999886 89999999999999864333456899999999976 5653221 0
Q ss_pred cceeEEEecCCCCCccccccCCcccccccCchhhHhhhcccCCcccCcccchHHHHHHHHHHHHHHHHHcCCceEEEEEE
Q 001959 898 IRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEKVVLDYSSDRLITDGHFQQSILSSIARAGCEIEELFGSAQDIEGVV 977 (991)
Q Consensus 898 ~~~~~i~~s~snGedle~~agaGl~~~v~~~~~~~~~vdys~~p~LtD~~~r~~ll~~La~lg~~IE~~fG~PQDIEwai 977 (991)
. + +. +..+.+|++++..||++||.|||||||+
T Consensus 298 ------------------------------~--~-----------~~-----p~~~~~L~~~~~~lE~hy~~pqDIEfti 329 (876)
T 1vbg_A 298 ------------------------------K--N-----------LM-----PQAYDELVENCNILESHYKEMQDIEFTV 329 (876)
T ss_dssp ------------------------------H--H-----------HC-----HHHHHHHHHHHHHHHHHHCSCEEEEEEE
T ss_pred ------------------------------c--c-----------cC-----HHHHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 0 0 01 1236899999999999999999999999
Q ss_pred ECCeEEEEeeccC
Q 001959 978 RDGKIYVVQTRPQ 990 (991)
Q Consensus 978 ~dg~LyILQaRP~ 990 (991)
++|+|||||+||+
T Consensus 330 ~~g~L~iLQ~Rp~ 342 (876)
T 1vbg_A 330 QENRLWMLQCRTG 342 (876)
T ss_dssp ETTEEEEEEEEEC
T ss_pred ECCEEEEEEeccc
Confidence 9999999999996
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=100.00 E-value=1.4e-38 Score=389.61 Aligned_cols=241 Identities=22% Similarity=0.322 Sum_probs=186.3
Q ss_pred cccccccccCc---ccccHHHHHHHHHHhcCCCcccCCCceeeChhhHHHHHhhh--chHHHHHHHHHHHhhcC------
Q 001959 672 RYAITSDEFTG---ELVGAKSRNIAYLKGKVPSWIGIPTSVALPFGVFEKVLSDN--INQAVAEKLQILKQKLG------ 740 (991)
Q Consensus 672 ~~vl~l~e~~~---~~vGgKAanLa~L~~~~p~g~~VP~GfvIpfgafe~~L~~~--~n~~L~~~I~~l~~~l~------ 740 (991)
+||++|++.+. .++|||++||++|.+ .++|||+||+||+++|++|++.+ ..++++++|...++.++
T Consensus 2 ~~v~~f~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~~l~~le~~~~~~ 78 (873)
T 1kbl_A 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKK 78 (873)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CeEEECcCCChhhhhhCcHHHHHHHHHHh---CCCCCCCEEEEcHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHhccc
Confidence 57888888764 789999999999998 68999999999999999999876 34467777666554332
Q ss_pred --CC-Ch----------HHHHHHHHHHHcCCCcHHHHHHHHHH----------HHc------------------------
Q 001959 741 --EE-DH----------SALREIRETVLQMKAPNQLVQELKTE----------MKS------------------------ 773 (991)
Q Consensus 741 --~~-d~----------~~L~~Ir~~I~~~~lP~eL~~eL~~a----------~~s------------------------ 773 (991)
.. ++ ..+.-+++.|++..+|+++.+.|.+. ++.
T Consensus 79 fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v~~~~f~~~~~~~ 158 (873)
T 1kbl_A 79 FGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAM 158 (873)
T ss_dssp BTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred cCCCCCchhHHHhhccccccccHHHHHHcCCCCHHHHHHHHHhhCCchHHHHHHHHHHhccCCceeeccchhHHHHHHHH
Confidence 11 11 01123467788888888888777741 110
Q ss_pred --------------------------------cCCCCCCCCCcchHHHHHHHHHHHHHcCCChhHHHHHHhcCCCccccc
Q 001959 774 --------------------------------SGMPWPGDEGEQRWEQAWMAIKKVWASKWNERAFFSTRRVKLDHEYLC 821 (991)
Q Consensus 774 --------------------------------sg~~~~g~~G~~~~e~l~~AIK~VWAS~fseRA~~YRr~~Gi~~~~v~ 821 (991)
.|.++|.+ .+++|+.|||+||||+||+||+.||+.+|++++ .+
T Consensus 159 ~~~~~v~~ds~~taedl~~~~~~~~~~~~~~~~g~~fp~d----p~eqL~~Aik~V~aS~~~~RAi~YR~~~gi~~~-~~ 233 (873)
T 1kbl_A 159 KEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQE----PKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGD-WG 233 (873)
T ss_dssp HHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCCCC----HHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGG-GC
T ss_pred HHhcCcCccCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcc----HHHHHHHHHHHHHhccCCHHHHHHHHHcCCCch-hC
Confidence 11222222 379999999999999999999999999999997 69
Q ss_pred ceeEEEEeeccC-----eeEEEEeCCCCCCCCCeEEEE-EeccCCccccccccCCceeEEEecCCCCCccccCCCCCccc
Q 001959 822 MAVLVQEIINAD-----YAFVIHTTNPSSGDSSEIYAE-VVKGLGETLVGAYPGRALSFVCKKNDLKYPRVLGYPSKPIG 895 (991)
Q Consensus 822 MAVLVQeMV~ad-----~SGVlfT~nP~tgd~~~i~Ie-av~GLGE~LVsG~~Gtpd~f~v~K~~~~~~~vl~~~sk~ig 895 (991)
|||+||+||.++ .|||+||+||.||+++ ++++ .+.|+||.||+|.+ +|+.|.+ +
T Consensus 234 ~AV~VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~-~~g~~li~a~GE~VV~G~~-tPd~~~~----------l-------- 293 (873)
T 1kbl_A 234 TAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKG-IYGEYLINAQGEDVVAGVR-TPQPITQ----------L-------- 293 (873)
T ss_dssp CEEEEEECCCTTSSTTCEEEEEEEECTTTCCEE-EEEEEEESCCHHHHHHTSS-CCEEGGG----------H--------
T ss_pred ceEEEEEcccCCCCCceeEEEEEecCCCCCCcc-cceEEEecCCchhhhcCCc-Cchhhhh----------h--------
Confidence 999999999886 7999999999999874 4444 46899999999876 5553211 0
Q ss_pred cccceeEEEecCCCCCccccccCCcccccccCchhhHhhhcccCCcccCcccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 001959 896 LFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEKVVLDYSSDRLITDGHFQQSILSSIARAGCEIEELFGSAQDIEG 975 (991)
Q Consensus 896 ~~~~~~~i~~s~snGedle~~agaGl~~~v~~~~~~~~~vdys~~p~LtD~~~r~~ll~~La~lg~~IE~~fG~PQDIEw 975 (991)
. . +. +..+++|++++..||++||.||||||
T Consensus 294 --------------------------------~--~-----------~~-----p~~~~~L~~~~~~lE~hy~~pqDIEf 323 (873)
T 1kbl_A 294 --------------------------------E--N-----------DM-----PDCYKQFMDLAMKLEKHFRDMQDMEF 323 (873)
T ss_dssp --------------------------------H--H-----------HC-----HHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred --------------------------------c--c-----------cC-----HHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 0 0 01 12368999999999999999999999
Q ss_pred EEECCeEEEEeeccC
Q 001959 976 VVRDGKIYVVQTRPQ 990 (991)
Q Consensus 976 ai~dg~LyILQaRP~ 990 (991)
|+++|+|||||+||.
T Consensus 324 ti~~g~L~iLQtRp~ 338 (873)
T 1kbl_A 324 TIEEGKLYFLQTRNG 338 (873)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEECCEEEEEEeccc
Confidence 999999999999995
No 4
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=100.00 E-value=2.5e-38 Score=386.41 Aligned_cols=269 Identities=21% Similarity=0.225 Sum_probs=190.2
Q ss_pred ccccccccc----cC---cccccHHHHHHHHHHhcCCCcccCCCceeeChhhHHHHHhhh-chHHHHHHHHHHHhhcC--
Q 001959 671 GRYAITSDE----FT---GELVGAKSRNIAYLKGKVPSWIGIPTSVALPFGVFEKVLSDN-INQAVAEKLQILKQKLG-- 740 (991)
Q Consensus 671 ~~~vl~l~e----~~---~~~vGgKAanLa~L~~~~p~g~~VP~GfvIpfgafe~~L~~~-~n~~L~~~I~~l~~~l~-- 740 (991)
.+||++|++ .+ .+++|||++||++|.+ .|+|||+||+||+.+|.+|++.+ ..++++++|...++.++
T Consensus 4 ~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~---lglpVPpGF~Itteac~~~~~~~~~~~~l~~~i~~~l~~le~~ 80 (913)
T 1h6z_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 80 (913)
T ss_dssp CCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcccCChhhHhhcChHhhhHHHHHH---CCCCCCCcEEeeHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 468888876 33 3899999999999999 79999999999999999999765 23466666555443221
Q ss_pred --C--CC---h----------HHHHHHHHHHHcCCCcHHHHHH-HHH----------HHH----c-----cCCCCCCCC-
Q 001959 741 --E--ED---H----------SALREIRETVLQMKAPNQLVQE-LKT----------EMK----S-----SGMPWPGDE- 782 (991)
Q Consensus 741 --~--~d---~----------~~L~~Ir~~I~~~~lP~eL~~e-L~~----------a~~----s-----sg~~~~g~~- 782 (991)
. +| + ...--+++.|+++.++++.++. |.+ .++ . .|.+-..|+
T Consensus 81 ~g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~vv~~v~~~~fe~ 160 (913)
T 1h6z_A 81 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 160 (913)
T ss_dssp HCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTST
T ss_pred hCcccCCCCCccceeeecccccccchHHHHHHhcCCCHHHHHHHHHHhcCChhHHHHHHHHHHHHhchhhcCCCHHHHHH
Confidence 0 11 1 1123578888888888888887 521 111 1 122100000
Q ss_pred -------------------------------------C----cchHHHHHHHHHHHHHcCCChhHHHHHHhcCCCccccc
Q 001959 783 -------------------------------------G----EQRWEQAWMAIKKVWASKWNERAFFSTRRVKLDHEYLC 821 (991)
Q Consensus 783 -------------------------------------G----~~~~e~l~~AIK~VWAS~fseRA~~YRr~~Gi~~~~v~ 821 (991)
| +..+++|+.|||+||||+||+||+.||+.+|++++ ..
T Consensus 161 ~~~~~k~~~g~~~d~~~~a~dl~~~~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi~YR~~~gi~~~-~~ 239 (913)
T 1h6z_A 161 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-LG 239 (913)
T ss_dssp TTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSC-CC
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHhcCcHHHHHHHHHcCCChh-hc
Confidence 1 11278999999999999999999999999999995 79
Q ss_pred ceeEEEEeeccC-----eeEEEEeCCCCCCCCCeEEEEE-eccCCccccccccCCceeEEEecCCCCCccccCCCCCccc
Q 001959 822 MAVLVQEIINAD-----YAFVIHTTNPSSGDSSEIYAEV-VKGLGETLVGAYPGRALSFVCKKNDLKYPRVLGYPSKPIG 895 (991)
Q Consensus 822 MAVLVQeMV~ad-----~SGVlfT~nP~tgd~~~i~Iea-v~GLGE~LVsG~~Gtpd~f~v~K~~~~~~~vl~~~sk~ig 895 (991)
|||+||+||.++ .|||+||+||.||++ .+++++ +.|+||.||+|.+ +|+.|++++.. .+. .+.+.
T Consensus 240 mAV~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~-~~~ge~li~alGE~VVsG~v-tPd~~~v~~~~----~~~---~~~i~ 310 (913)
T 1h6z_A 240 TAVNVQAMVFGNINDRSATGVAFSRSPSTGEN-FFFGEYLVNAQGEDVVAGIR-TPQQINHSLSL----RWA---KAHGV 310 (913)
T ss_dssp CCEEEEECCCSCSSTTCEEEEEESSCSSSCCS-SCEEEEEESCCTTHHHHCCS-CCEESSHHHHH----HHH---TTSSC
T ss_pred ceEEEEEEeccCCCCcceeEEEEeCCCCCCCc-ceeeEEEEecCCchhccCCc-cCeEEEEeccc----chh---hcccc
Confidence 999999999875 689999999999986 455554 4579999999998 89998876532 110 00000
Q ss_pred cccceeEEEecCCCCCccccccCCcccccccCchhhHhhhcccCCcccCcccchHHHHHHHHHHHHHHHHHcCCceEEEE
Q 001959 896 LFIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEKVVLDYSSDRLITDGHFQQSILSSIARAGCEIEELFGSAQDIEG 975 (991)
Q Consensus 896 ~~~~~~~i~~s~snGedle~~agaGl~~~v~~~~~~~~~vdys~~p~LtD~~~r~~ll~~La~lg~~IE~~fG~PQDIEw 975 (991)
. .++.....++.+.+++++ +.+|++++.+||+|||.||||||
T Consensus 311 ~---------------------------------~~~~~~~~~~l~~l~p~~-----~~eLa~~a~~lE~hyg~pqDIEw 352 (913)
T 1h6z_A 311 G---------------------------------EEERRKRYPSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLEF 352 (913)
T ss_dssp C---------------------------------HHHHHHHSCCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEEE
T ss_pred h---------------------------------hhhcccCchhhhhcCHHH-----HHHHHHHHHHHHHHhCCCceEEE
Confidence 0 000000001122344444 79999999999999999999999
Q ss_pred EEECCeEEEEeeccC
Q 001959 976 VVRDGKIYVVQTRPQ 990 (991)
Q Consensus 976 ai~dg~LyILQaRP~ 990 (991)
|+++|+|||||+||.
T Consensus 353 ai~~G~LyILQaRP~ 367 (913)
T 1h6z_A 353 TVQDGRLWLLQCRNG 367 (913)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEECCEEEEEEecCc
Confidence 999999999999995
No 5
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=100.00 E-value=1.3e-34 Score=357.98 Aligned_cols=270 Identities=20% Similarity=0.205 Sum_probs=181.5
Q ss_pred cccccccc----ccC---cccccHHHHHHHHHHhcCCCcccCCCceeeChhhHHHHHhhh-chHHHHHHHHHHHhhcC--
Q 001959 671 GRYAITSD----EFT---GELVGAKSRNIAYLKGKVPSWIGIPTSVALPFGVFEKVLSDN-INQAVAEKLQILKQKLG-- 740 (991)
Q Consensus 671 ~~~vl~l~----e~~---~~~vGgKAanLa~L~~~~p~g~~VP~GfvIpfgafe~~L~~~-~n~~L~~~I~~l~~~l~-- 740 (991)
.+||+.|. +.+ .++||||++||++|.+ .|+|||+||+||+.+|++|++.+ ..+.+.+.|.+.+..++
T Consensus 4 ~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~---~GlpVP~GF~iTt~Ay~~fl~~~~l~~~i~~~l~~~l~~le~~ 80 (913)
T 2x0s_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 80 (913)
T ss_dssp CCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCccCCcchhhhCcHHHHHHHHHHH---CcCCCCCCEeehHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 46888884 333 3689999999999998 69999999999999999999875 23455555543322110
Q ss_pred --C--CChH-----------------H--------H--HHHHHHHHcCCCcHHHH-----------------------HH
Q 001959 741 --E--EDHS-----------------A--------L--REIRETVLQMKAPNQLV-----------------------QE 766 (991)
Q Consensus 741 --~--~d~~-----------------~--------L--~~Ir~~I~~~~lP~eL~-----------------------~e 766 (991)
. +|.. . + +.++.++...+-++.+. +.
T Consensus 81 ~~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~~v~~v~~~~fe~ 160 (913)
T 2x0s_A 81 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 160 (913)
T ss_dssp HSCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHHHHHCCCSHHHHH
T ss_pred hhhhhCCccccchheecccccccCCccchhHHhccccHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Confidence 0 0000 0 0 12222222222222111 11
Q ss_pred HHH---HHHccCC--CCC--CCCCc------------------chHHHHHHHHHHHHHcCCChhHHHHHHhcCCCccccc
Q 001959 767 LKT---EMKSSGM--PWP--GDEGE------------------QRWEQAWMAIKKVWASKWNERAFFSTRRVKLDHEYLC 821 (991)
Q Consensus 767 L~~---a~~ssg~--~~~--g~~G~------------------~~~e~l~~AIK~VWAS~fseRA~~YRr~~Gi~~~~v~ 821 (991)
+.. +.+++.. +++ +|+|+ ..+++|+.|||+||||+||+||+.||+.+|+++. +.
T Consensus 161 ~~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~YR~~~g~~~~-~~ 239 (913)
T 2x0s_A 161 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-LG 239 (913)
T ss_dssp HHHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTHHHHSCCCCC-CC
T ss_pred HHHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHccCHHHHHHHHhcCCCcc-cc
Confidence 111 1122221 111 12221 1368999999999999999999999999999986 89
Q ss_pred ceeEEEEeeccC-----eeEEEEeCCCCCCCCCeEEEEEeccCCccccccccCCceeEEEecCCCCCccccCCCCCcccc
Q 001959 822 MAVLVQEIINAD-----YAFVIHTTNPSSGDSSEIYAEVVKGLGETLVGAYPGRALSFVCKKNDLKYPRVLGYPSKPIGL 896 (991)
Q Consensus 822 MAVLVQeMV~ad-----~SGVlfT~nP~tgd~~~i~Ieav~GLGE~LVsG~~Gtpd~f~v~K~~~~~~~vl~~~sk~ig~ 896 (991)
+||.||.||.++ .|||+||+||.||+++.+.+.+++||||.||+|.+ +||.|...+... .+ ..+.++.
T Consensus 240 laV~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~v-tPd~~~~~~~~~---~~---~~~~~~~ 312 (913)
T 2x0s_A 240 TAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLR---WA---KAHGVGE 312 (913)
T ss_dssp CEEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSS-CCBCSSHHHHHH---HH---HTTTCCH
T ss_pred cceEEEEeeecccCccccceEEEecCCCCCCCcEEEEEccCCcCcccccCCC-CCcccccchhhh---hh---hhccccc
Confidence 999999999976 57999999999999999999999999999999998 898765432110 00 0010110
Q ss_pred ccceeEEEecCCCCCccccccCCcccccccCchhhHhhhcccCCcccCcccchHHHHHHHHHHHHHHHHHcCCceEEEEE
Q 001959 897 FIRRSIIFRSDSNGEDLEGYAGAGLYDSVPMDEAEKVVLDYSSDRLITDGHFQQSILSSIARAGCEIEELFGSAQDIEGV 976 (991)
Q Consensus 897 ~~~~~~i~~s~snGedle~~agaGl~~~v~~~~~~~~~vdys~~p~LtD~~~r~~ll~~La~lg~~IE~~fG~PQDIEwa 976 (991)
+ +. ...|. .+ ++..++..+.|.+++.+||+||+.||||||+
T Consensus 313 k---------------------------------~~-~~~~~---~~--~~~~p~~~~~l~~~~~~lE~hy~~~qdiE~a 353 (913)
T 2x0s_A 313 E---------------------------------ER-RKRYP---SM--EEAMPENYRLLCDVRKRLENHYRDMQDLEFT 353 (913)
T ss_dssp H---------------------------------HH-HHHSC---CH--HHHSHHHHHHHHHHHHHHHHHHSSCEEEEEE
T ss_pred c---------------------------------cc-ccccc---ch--hhhhHHHHHHHHHHHHHHHHhcCcHHHhHHH
Confidence 0 00 00011 11 1112344688999999999999999999999
Q ss_pred EECCeEEEEeeccC
Q 001959 977 VRDGKIYVVQTRPQ 990 (991)
Q Consensus 977 i~dg~LyILQaRP~ 990 (991)
+++|+||+||+||.
T Consensus 354 ~~~g~l~ilq~R~~ 367 (913)
T 2x0s_A 354 VQDGRLWLLQCRNG 367 (913)
T ss_dssp EETTEEEEEEEEEC
T ss_pred hcCCchHHHHhhhc
Confidence 99999999999973
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=95.75 E-value=0.011 Score=70.49 Aligned_cols=91 Identities=8% Similarity=0.157 Sum_probs=67.0
Q ss_pred eeeeEEEEEEEEecccccccccCCCCCeEEEEecCCCCCCCC--CCceEEEcCCCCCcccceeeecccCCcceeEecChh
Q 001959 535 ISPVEVFGYVAVVDELLAVQDKSYDRPTILLARRVKGEEEIP--DGTVAVLTADMPDVLSHVSVRARNCKVCFATCFDPN 612 (991)
Q Consensus 535 ispG~A~G~L~~V~~l~~~~~~~~~~p~Ill~~~v~G~eeIp--~~VaGVit~~~~~~LSHv~VrARn~gVp~at~~d~~ 612 (991)
++||.+.|+++++.+..+.. ..+..+.|||++..+- ++++ ..+.||||..-+ ..||.++.||++|||-+.--..
T Consensus 503 i~~G~v~G~v~vv~~~~da~-~~~~~g~ILVa~~l~P-s~~~~l~~v~GiVte~Gg-~tSHaAIlAR~lgIPaVvG~~~- 578 (606)
T 3t05_A 503 IGRGSVVGTTLVAETVKDLE-GKDLSDKVIVTNSIDE-TFVPYVEKALGLITEENG-ITSPSAIVGLEKGIPTVVGVEK- 578 (606)
T ss_dssp ESSCEEEEEEEECSSGGGGS-SSCCSSEEEEESCCCT-TTHHHHTTSSEEEESSCC-SSSHHHHHHHHTTCCEEECCTT-
T ss_pred cccceEEEEEEEECChHHHh-hcCCCCeEEEECCCCH-HHHHHHHhhEEEEecCCC-cccHHHHHHhhCCCCEEEeccc-
Confidence 68889999999999876632 2356788999988761 2333 479999998765 7899999999999997764332
Q ss_pred hhhHhhhcCCCeEEEeecC
Q 001959 613 ILADLQSNEGKMLHLKPTS 631 (991)
Q Consensus 613 ~~~~l~~l~Gk~V~l~vs~ 631 (991)
... .-.+|+.|.+....
T Consensus 579 a~~--~l~~G~~V~vDg~~ 595 (606)
T 3t05_A 579 AVK--NISNNVLVTIDAAQ 595 (606)
T ss_dssp HHH--HSCSSCEEEEETTT
T ss_pred HHh--hCCCCCEEEEECCC
Confidence 222 22479988886654
No 7
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=94.97 E-value=0.01 Score=70.78 Aligned_cols=96 Identities=15% Similarity=0.203 Sum_probs=68.5
Q ss_pred eEeeeeEEEEEEEEecccccccccCCCCCeEEEEecCCCCCCCC--CCceEEEcCCCCCcccceeeecccCCcceeEecC
Q 001959 533 QVISPVEVFGYVAVVDELLAVQDKSYDRPTILLARRVKGEEEIP--DGTVAVLTADMPDVLSHVSVRARNCKVCFATCFD 610 (991)
Q Consensus 533 q~ispG~A~G~L~~V~~l~~~~~~~~~~p~Ill~~~v~G~eeIp--~~VaGVit~~~~~~LSHv~VrARn~gVp~at~~d 610 (991)
..++||.+.|+++++....+... .+..|.||+++..+= +++| ..+.||||..- -..||.++.||++|||-+.--.
T Consensus 482 ~~~~~g~~~G~v~v~~~~~~~~~-~~~~g~ILVa~~l~P-s~~~~l~~~~Givt~~G-g~tSHaAIlAR~lgIPaVvG~~ 558 (587)
T 2e28_A 482 QGIGRKSAFGKAVVAKTAEEARQ-KMVDGGILVTVSTDA-DMMPAIEKAAAIITEEG-GLTSHAAVVGLSLGIPVIVGVE 558 (587)
T ss_dssp EEESSCEECCBEEECSSHHHHHH-HCCTTCEEEESCCCG-GGHHHHTTCSEEEESSC-CTTSHHHHHHHHHTCCEEECCT
T ss_pred ccccCCeEEeeEEEeCCHHHHhh-cCCCCeEEEECCCCH-HHHHHHHhcEEEEEcCC-CCcCHHHHHHHHcCCCEEEecc
Confidence 44789999999999987655221 246788999988761 2333 37999999865 4899999999999999776333
Q ss_pred hhhhhHhhhcCCCeEEEeecCCce
Q 001959 611 PNILADLQSNEGKMLHLKPTSADI 634 (991)
Q Consensus 611 ~~~~~~l~~l~Gk~V~l~vs~~~~ 634 (991)
. ....+ .+|+.|.+......+
T Consensus 559 ~-~~~~l--~~G~~v~vDg~~G~V 579 (587)
T 2e28_A 559 N-ATTLF--KDGQEITVDGGFGAV 579 (587)
T ss_dssp T-HHHHS--CTTCBEEEETTTTEE
T ss_pred c-HHHhC--CCCCEEEEECCCCEE
Confidence 1 33323 469999887655333
No 8
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=94.57 E-value=0.0086 Score=73.94 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=56.0
Q ss_pred eEeeeeEEEEEEEEecccccccccCCCCCeEEEEecCCCCCCCC--CCceEEEcCCCCCcccceeeecccCCcceeEecC
Q 001959 533 QVISPVEVFGYVAVVDELLAVQDKSYDRPTILLARRVKGEEEIP--DGTVAVLTADMPDVLSHVSVRARNCKVCFATCFD 610 (991)
Q Consensus 533 q~ispG~A~G~L~~V~~l~~~~~~~~~~p~Ill~~~v~G~eeIp--~~VaGVit~~~~~~LSHv~VrARn~gVp~at~~d 610 (991)
..++||.+.|++++|.+.++.. .+..+.|||++..+ -+++| ..+.||||.. +-..||.+|.||++|||-+.--.
T Consensus 364 ~~~~~g~~~G~v~~~~~~~~~~--~~~~g~ILv~~~~~-p~~~~~~~~~~givt~~-Gg~tSHaAivar~~giP~vvg~~ 439 (794)
T 2ols_A 364 RAIGQKVGQGKVRLIKDASEMD--SVEAGDVLVTDMTD-PDWEPVMKRASAIVTNR-GGRTCHAAIIARELGIPAVVGCG 439 (794)
T ss_dssp BC--CCCCCBCBC----------------CEEEESCCC-GGGSHHHHTCSEEEESS-CCTTCHHHHHTTC---CEEECCT
T ss_pred cccCCCcceEEEEEecCHHHHH--hcCCCeEEEECCCC-HHHHHHHhhCcEEEEcC-CCcccHHHHHHhHCCCCEEEcCc
Confidence 4469999999999887766533 34567899988875 25555 3799999986 45899999999999999776333
Q ss_pred hhhhhHhhhcCCCeEEE---eecCCceEEE
Q 001959 611 PNILADLQSNEGKMLHL---KPTSADIAYS 637 (991)
Q Consensus 611 ~~~~~~l~~l~Gk~V~l---~vs~~~~~l~ 637 (991)
. ....+ .+|+.|.+ ..+...|...
T Consensus 440 ~-~~~~~--~~G~~v~v~c~Dg~~G~v~~g 466 (794)
T 2ols_A 440 N-ATELL--KNGQEVTVSCAEGDTGFIYAG 466 (794)
T ss_dssp T-HHHHS--CSSCCEECCCC--CCCBCEEC
T ss_pred c-hhhcc--cCCCEEEEEecCCCcceEEeC
Confidence 2 23322 46999998 5555444443
No 9
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=93.53 E-value=0.043 Score=68.35 Aligned_cols=97 Identities=22% Similarity=0.325 Sum_probs=63.0
Q ss_pred eEeeeeEEEEEEEEeccccccccc-CCCCCeEEEEecCCCCCCCC--CCceEEEcCCCCCcccceeeecccCCcceeE-e
Q 001959 533 QVISPVEVFGYVAVVDELLAVQDK-SYDRPTILLARRVKGEEEIP--DGTVAVLTADMPDVLSHVSVRARNCKVCFAT-C 608 (991)
Q Consensus 533 q~ispG~A~G~L~~V~~l~~~~~~-~~~~p~Ill~~~v~G~eeIp--~~VaGVit~~~~~~LSHv~VrARn~gVp~at-~ 608 (991)
...+||.|+|++++ ..++.... ...+|.|||++..+ -++++ ..+.||||..-+ ..||.+|.||++|||-++ |
T Consensus 424 ~~aspG~a~G~v~~--~~~~a~~~~~~ge~~ILV~~~t~-P~d~~~m~~a~GIvT~~GG-~TSHaAIvAR~lGiPaVvG~ 499 (913)
T 1h6z_A 424 LAASPGAAVGQVVF--DAESAKEWSGRGKKVIMVRLETS-PEDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCVSGC 499 (913)
T ss_dssp EEEESCEEEEEEES--SHHHHHSTTTTSCCEEEEESSCC-GGGCTTTTTSSEEEESSCC-TTCHHHHHHHHTTCCEEECC
T ss_pred eecCCceEEEEEEE--CHHHHHHHHhcCCCEEEEECCCC-HHHHHhHHhceEEEEcCCC-cccHHHHHHHhcCCCEEECC
Confidence 44799999999764 22222211 23567799987765 35566 368999998865 789999999999999776 4
Q ss_pred cChhhhh-------HhhhcCCCeEEEeecCCce
Q 001959 609 FDPNILA-------DLQSNEGKMLHLKPTSADI 634 (991)
Q Consensus 609 ~d~~~~~-------~l~~l~Gk~V~l~vs~~~~ 634 (991)
.+. .++ .-.-.+|..|.+..+...|
T Consensus 500 ~~~-~~d~~~~~~~~~~l~~Gd~VtvDG~~G~V 531 (913)
T 1h6z_A 500 GDM-VIRGKSFKLNGSVFREGDYITIDGSKGLI 531 (913)
T ss_dssp TTC-EESSSCEEETTEEESSCEEEEETTSEEES
T ss_pred ccc-ccccceeccCceEecCCCEEEEECCCCEE
Confidence 442 111 0122467777775544333
No 10
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=93.27 E-value=0.026 Score=70.27 Aligned_cols=99 Identities=22% Similarity=0.319 Sum_probs=64.3
Q ss_pred EeeeeEEEEEEEEecccccccc-cCCCCCeEEEEecCCCCCCCC--CCceEEEcCCCCCcccceeeecccCCcceeE-ec
Q 001959 534 VISPVEVFGYVAVVDELLAVQD-KSYDRPTILLARRVKGEEEIP--DGTVAVLTADMPDVLSHVSVRARNCKVCFAT-CF 609 (991)
Q Consensus 534 ~ispG~A~G~L~~V~~l~~~~~-~~~~~p~Ill~~~v~G~eeIp--~~VaGVit~~~~~~LSHv~VrARn~gVp~at-~~ 609 (991)
.++||.+.|++++ ..++... ....+|.|||++..+ -+++| ..+.||||..-+ ..||.+|.||++|||-++ |.
T Consensus 400 ~as~G~a~G~vv~--~~~~~~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~VvG~~ 475 (876)
T 1vbg_A 400 PASPGAAVGQVVF--TAEDAEAWHSQGKAAILVRAETS-PEDVGGMHAAVGILTERGG-MTSHAAVVARGWGKCCVSGCS 475 (876)
T ss_dssp EEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESCCC-TTSHHHHHHSSEEEESSCC-TTSHHHHHHHHTTCCEEECCT
T ss_pred ccCCCeEEEEEEE--CHHHHHHHhhccCCEEEEEcCCC-HHHHHhHhhccEEEECCCC-CccHHHHHHhHcCCCEEEcCC
Confidence 4699999999754 2222111 113567899988776 24444 257899998654 899999999999999776 34
Q ss_pred Chhhhh--------Hhh-hcCCCeEEEeecCCceEEE
Q 001959 610 DPNILA--------DLQ-SNEGKMLHLKPTSADIAYS 637 (991)
Q Consensus 610 d~~~~~--------~l~-~l~Gk~V~l~vs~~~~~l~ 637 (991)
+. .++ ... -.+|..|.+.-+...|.+.
T Consensus 476 ~~-~~~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g 511 (876)
T 1vbg_A 476 GI-RVNDAEKLVTIGGHVLREGEWLSLNGSTGEVILG 511 (876)
T ss_dssp TE-EEEGGGTEEEETTEEEETTCEEEEETTTTEEEES
T ss_pred Cc-eeccccceEEeCCeeecCCCEEEEECCCCEEEEC
Confidence 32 111 011 2368888887666544443
No 11
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=92.59 E-value=0.028 Score=69.92 Aligned_cols=99 Identities=21% Similarity=0.239 Sum_probs=63.7
Q ss_pred eEeeeeEEEEEEEEecccccccc-cCCCCCeEEEEecCCCCCCCC--CCceEEEcCCCCCcccceeeecccCCcceeE-e
Q 001959 533 QVISPVEVFGYVAVVDELLAVQD-KSYDRPTILLARRVKGEEEIP--DGTVAVLTADMPDVLSHVSVRARNCKVCFAT-C 608 (991)
Q Consensus 533 q~ispG~A~G~L~~V~~l~~~~~-~~~~~p~Ill~~~v~G~eeIp--~~VaGVit~~~~~~LSHv~VrARn~gVp~at-~ 608 (991)
..++||.+.|++++ ..++... ....+|.|||.+..+ -++++ ..+.||||..-+ ..||.+|.||++|||-++ |
T Consensus 395 ~~as~G~a~G~vv~--~~~~a~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~VvG~ 470 (873)
T 1kbl_A 395 LPASPGAAAGKVYF--TADEAKAAHEKGERVILVRLETS-PEDIEGMHAAEGILTVRGG-MTSHAAVVARGMGTCCVSGC 470 (873)
T ss_dssp EEEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESSCC-GGGHHHHHHCSEEEESSCC-TTSHHHHHHHHHTCEEEECC
T ss_pred ccccCceEEEEEEE--cHHHHHHhhccCCCEEEEECCCC-HHHHHHHHhccEEEecCCC-CccHHHHHHhHcCCCEEEcC
Confidence 34699999999854 2222111 113567899988776 24444 258899998654 899999999999999776 4
Q ss_pred cChhhhh--------Hhh-hcCCCeEEEeecCCceEE
Q 001959 609 FDPNILA--------DLQ-SNEGKMLHLKPTSADIAY 636 (991)
Q Consensus 609 ~d~~~~~--------~l~-~l~Gk~V~l~vs~~~~~l 636 (991)
.+. .++ ... -.+|..|.+.-+...|.+
T Consensus 471 ~~~-~i~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~ 506 (873)
T 1kbl_A 471 GEI-KINEEAKTFELGGHTFAEGDYISLDGSTGKIYK 506 (873)
T ss_dssp TTC-EEETTTTEEEETTEEEETTCEEEEETTTCEEEE
T ss_pred CCc-eecccccEEEeCCeeecCCCEEEEECCCCEEEE
Confidence 432 111 011 236888888766544444
No 12
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=91.06 E-value=0.089 Score=65.90 Aligned_cols=69 Identities=23% Similarity=0.309 Sum_probs=51.4
Q ss_pred EeeeeEEEEEEEEe-cccccccccCCCCCeEEEEec-CCCCCCCC--CCceEEEcCCCCCcccceeeecccCCcceeE
Q 001959 534 VISPVEVFGYVAVV-DELLAVQDKSYDRPTILLARR-VKGEEEIP--DGTVAVLTADMPDVLSHVSVRARNCKVCFAT 607 (991)
Q Consensus 534 ~ispG~A~G~L~~V-~~l~~~~~~~~~~p~Ill~~~-v~G~eeIp--~~VaGVit~~~~~~LSHv~VrARn~gVp~at 607 (991)
..+||.++|++++. ++..+.. ...+++|||.+. -| +++| --..||||..=+ .-||.+|.||.+|||-+.
T Consensus 425 ~aspG~a~G~v~~~~~~~~~~~--~~~~g~ILV~~~T~P--d~~p~M~~a~gIvT~~GG-~TSHAAIvAR~LGIPaVV 497 (913)
T 2x0s_A 425 AASPGAAVGQVVFDAESAKEWS--GRGKKVIMVRLETSP--EDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCVS 497 (913)
T ss_dssp EEESSEEEEEEESSHHHHHHHT--TTTCCEEEEESSCCT--TSHHHHTTSSEEEESSCC-TTCHHHHHHHTTTCCEEE
T ss_pred ccCCccceeeEEechhHHHHHh--hCCCceEEEcCCCCH--HHHHHHHHHHHHHHHccC-CCChHHHHHHHcCCCeec
Confidence 46999999998763 3333322 245678999884 45 6776 358899998865 779999999999999876
No 13
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=90.54 E-value=0.064 Score=57.74 Aligned_cols=76 Identities=16% Similarity=0.191 Sum_probs=52.3
Q ss_pred CCCCeEEEEecCCCCCCCC----CCceEEEcCCCCCcccceeeecccCCcceeEecChhhhhHhhhcCCCeEEEeecCCc
Q 001959 558 YDRPTILLARRVKGEEEIP----DGTVAVLTADMPDVLSHVSVRARNCKVCFATCFDPNILADLQSNEGKMLHLKPTSAD 633 (991)
Q Consensus 558 ~~~p~Ill~~~v~G~eeIp----~~VaGVit~~~~~~LSHv~VrARn~gVp~at~~d~~~~~~l~~l~Gk~V~l~vs~~~ 633 (991)
+..|.|||++... -.+++ ..|.||||. .+-..||.++.||++|||-+.--.. ....+ .+|..|.+......
T Consensus 152 ~~~~~ILVa~~l~-Ps~~~~l~~~~~~givt~-~Gg~tSH~AIlAR~lgIPavvg~~~-~~~~~--~~G~~v~vDg~~G~ 226 (258)
T 1zym_A 152 IQDEVILVAADLT-PSETAQLNLKKVLGFITD-AGGRTSHTSIMARSLELPAIVGTGS-VTSQV--KNDDYLILDAVNNQ 226 (258)
T ss_dssp CCSCEEEECSCCC-HHHHHHSCGGGEEEEECS-CCCSSSHHHHHHHHHTCCEECCCSC-HHHHC--CTTCEEEECCSSCC
T ss_pred CCCCeEEEECCCC-HHHHHhhchhhcEEEEEc-CCCcccHHHHHHHHcCCCEEEechh-HHHhC--CCCCEEEEECCCCe
Confidence 4568888877665 12222 269999996 4558999999999999997663221 33322 46999998877655
Q ss_pred eEEEe
Q 001959 634 IAYSV 638 (991)
Q Consensus 634 ~~l~~ 638 (991)
+.+.+
T Consensus 227 v~~~p 231 (258)
T 1zym_A 227 VYVNP 231 (258)
T ss_dssp EEESC
T ss_pred EEECc
Confidence 65544
No 14
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=85.67 E-value=0.41 Score=57.05 Aligned_cols=76 Identities=11% Similarity=0.150 Sum_probs=52.8
Q ss_pred CCCCeEEEEecCCCCCCCC--C--CceEEEcCCCCCcccceeeecccCCcceeEecChhhhhHhhhcCCCeEEEeecCCc
Q 001959 558 YDRPTILLARRVKGEEEIP--D--GTVAVLTADMPDVLSHVSVRARNCKVCFATCFDPNILADLQSNEGKMLHLKPTSAD 633 (991)
Q Consensus 558 ~~~p~Ill~~~v~G~eeIp--~--~VaGVit~~~~~~LSHv~VrARn~gVp~at~~d~~~~~~l~~l~Gk~V~l~vs~~~ 633 (991)
...|.|||++... -++++ + .+.||||..- -..||.+|.||++|||-+.--.. ....+ .+|..|.+.-+...
T Consensus 154 ~~~~~ILVa~~l~-P~~~~~l~~~~~~Givt~~G-g~tSHaAIvAR~lgIPaVvg~~~-~~~~~--~~G~~v~vDg~~G~ 228 (572)
T 2wqd_A 154 IDESVVIVGNDLT-PSDTAQLNKEFVQGFATNIG-GRTSASAIMSRSLEIPAIVGTKS-ITQEV--KQGDMIIVDGLNGD 228 (572)
T ss_dssp CSCCEEEEESCCC-HHHHTTCCTTTEEEEEESSC-CTTSHHHHHHHHTTCCEEECCSS-HHHHC--CTTCEEEEETTTTE
T ss_pred CCCCEEEEEcCCC-HHHHHhhChhceeEEEEcCC-CcccHHHHHHHHcCCCEEEechh-HHhhC--CCCCEEEEECCCCE
Confidence 4568899987765 13333 1 4899998754 48999999999999997763321 33322 46999998877655
Q ss_pred eEEEe
Q 001959 634 IAYSV 638 (991)
Q Consensus 634 ~~l~~ 638 (991)
+.+.+
T Consensus 229 V~~~p 233 (572)
T 2wqd_A 229 VIVNP 233 (572)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 55544
No 15
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=84.48 E-value=0.39 Score=57.18 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=52.4
Q ss_pred CCCCeEEEEecCCCCCCCC----CCceEEEcCCCCCcccceeeecccCCcceeEecChhhhhHhhhcCCCeEEEeecCCc
Q 001959 558 YDRPTILLARRVKGEEEIP----DGTVAVLTADMPDVLSHVSVRARNCKVCFATCFDPNILADLQSNEGKMLHLKPTSAD 633 (991)
Q Consensus 558 ~~~p~Ill~~~v~G~eeIp----~~VaGVit~~~~~~LSHv~VrARn~gVp~at~~d~~~~~~l~~l~Gk~V~l~vs~~~ 633 (991)
..+|.|||++... -++++ ..+.||||..- -..||.+|.||++|||-+.--.. ....+ .+|..|.+.-+...
T Consensus 152 ~~~~~ILVa~~l~-Ps~~~~l~~~~~~Givt~~G-g~tSHaAIvAR~lgIPaVvG~~~-~~~~~--~~G~~v~vDg~~G~ 226 (575)
T 2hwg_A 152 IQDEVILVAADLT-PSETAQLNLKKVLGFITDAG-GRTSHTSIMARSLELPAIVGTGS-VTSQV--KNDDYLILDAVNNQ 226 (575)
T ss_dssp CCSCEEEEESCCC-HHHHHTCCTTTEEEEEESSC-CTTSHHHHHHHHTTCCEEECCSC-HHHHC--CTTCEEEEETTTTE
T ss_pred CCCCEEEEEcCCC-HHHHHHhCccceeEEEEcCC-CcccHHHHHHHHCCCCEEEcchh-HHhhC--CCCCEEEEECCCCE
Confidence 4578899987765 12222 15899998754 48999999999999997663321 33322 46999998877655
Q ss_pred eEEEe
Q 001959 634 IAYSV 638 (991)
Q Consensus 634 ~~l~~ 638 (991)
+.+.+
T Consensus 227 V~~~p 231 (575)
T 2hwg_A 227 VYVNP 231 (575)
T ss_dssp EEESC
T ss_pred EEeCC
Confidence 55544
No 16
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=51.61 E-value=11 Score=35.10 Aligned_cols=35 Identities=29% Similarity=0.568 Sum_probs=27.8
Q ss_pred EEEEEecCCccccceEEEecC-CceeecCCCceEEEcc
Q 001959 30 SIEIEIEEEGYVGMPFVLQSG-GNWIKNKGSDFYVDFS 66 (991)
Q Consensus 30 ~~~~~~~~~~~~g~~fv~~~~-~~w~~~~~~d~~~~~~ 66 (991)
+.+|+++.. ..+.||+++| ++|-+|+|.||.+.-.
T Consensus 52 ~~TI~~~~~--~~l~~~F~dG~~~WDNN~g~Ny~~~~g 87 (102)
T 2c3v_A 52 KVTIEAEEG--SQLRAAFNNGSGQWDNNQGRDYDFSSG 87 (102)
T ss_dssp EEEECCCTT--CEEEEEEECSSSCEECGGGTCEEEESE
T ss_pred EEEEecCCC--ceEEEEEeCCCcccccCCCcceEECCC
Confidence 467777643 6789999987 5899999999999653
No 17
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=49.35 E-value=15 Score=34.15 Aligned_cols=36 Identities=17% Similarity=0.387 Sum_probs=28.7
Q ss_pred EEEEEecCCccccceEEEecCC-ceeecCCCceEEEccc
Q 001959 30 SIEIEIEEEGYVGMPFVLQSGG-NWIKNKGSDFYVDFSY 67 (991)
Q Consensus 30 ~~~~~~~~~~~~g~~fv~~~~~-~w~~~~~~d~~~~~~~ 67 (991)
+.+|+|+.. ..+.||+++|. +|-+|+++||.++...
T Consensus 47 ~~TI~l~~g--~~~~~~F~dG~~~WDNn~g~Nyt~~~g~ 83 (104)
T 2laa_A 47 KITVDIGSA--SQLEAAFNDGNNNWDSNNTKNYSFSTGT 83 (104)
T ss_dssp EEEEECTTC--SCEEEEEECSSSCEESTTTSCEEECSEE
T ss_pred EEEEECCCC--CEEEEEEeCCCCcCcCCCCccEEecCCc
Confidence 468888764 56888888874 8999999999997743
No 18
>2la2_A Cecropin, papiliocin; antimicrobial peptide, cecropin-like peptide, AN inflammatory activity, antimicrobial protein; NMR {Papilio xuthus}
Probab=26.75 E-value=17 Score=27.78 Aligned_cols=10 Identities=50% Similarity=1.009 Sum_probs=8.8
Q ss_pred CchhhHHHHH
Q 001959 191 VGQRIRDEIL 200 (991)
Q Consensus 191 ~gq~ird~IL 200 (991)
+||+|||.|.
T Consensus 11 vGq~iRd~ii 20 (38)
T 2la2_A 11 VGRNVRDGII 20 (38)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6999999986
No 19
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=21.89 E-value=2e+02 Score=31.52 Aligned_cols=104 Identities=11% Similarity=0.070 Sum_probs=62.4
Q ss_pred CceEeeeeEEEEEEEE--ecccccccccCCC---CCeEEEEecCCCCCC----CC---------------CCceEEEcCC
Q 001959 531 SWQVISPVEVFGYVAV--VDELLAVQDKSYD---RPTILLARRVKGEEE----IP---------------DGTVAVLTAD 586 (991)
Q Consensus 531 ~wq~ispG~A~G~L~~--V~~l~~~~~~~~~---~p~Ill~~~v~G~ee----Ip---------------~~VaGVit~~ 586 (991)
+|+.+.+|.+.|+|.= +.-+.......|. +..||+++.+. |. .- ..|.|||..+
T Consensus 190 ~~~~~~~g~~~G~L~GGNL~~l~~l~GTpy~p~~~g~ILfLEdv~--e~~~~~py~idRmL~qL~~~G~~~~~~GiilG~ 267 (331)
T 4e5s_A 190 GYVSIHEGEATGDIIGGNMSTLNLLQGTSYMPNLKDKILFLEEDS--LTGTSTLKTFDRYLHSLMQQQNFKHVKGIVIGK 267 (331)
T ss_dssp CCEEEECEEEEEEEEEEEHHHHGGGTTSTTSCCCTTEEEEEECCS--TTGGGHHHHHHHHHHHHHTSTTGGGCCEEEEEC
T ss_pred CcEeecCceEEEEEEeehHHHHHHHhcCCcCCCCCCeEEEEEeCC--CcCCCCHHHHHHHHHHHHHcCCcccCCEEEEec
Confidence 5999999999999865 2222222221122 44799999998 52 11 2699999988
Q ss_pred CCCcc--ccee------eecccCCcceeEecChhhhhHhhhc-CCCeEEEeecCCceEE
Q 001959 587 MPDVL--SHVS------VRARNCKVCFATCFDPNILADLQSN-EGKMLHLKPTSADIAY 636 (991)
Q Consensus 587 ~~~~L--SHv~------VrARn~gVp~at~~d~~~~~~l~~l-~Gk~V~l~vs~~~~~l 636 (991)
+.+-- ..-. =+....+||.++-.+-.-...-..+ .|..++|.+..+...+
T Consensus 268 f~~~~~~~~~~~~~vl~~~~~~~~iPv~~~~~~GH~~p~~~lP~G~~a~ld~~~~~~~i 326 (331)
T 4e5s_A 268 MQKGAECTIEDIQEMIASKPELAHIPIIANASFGHTTPIFTFPIGGRATIISSKEKTSI 326 (331)
T ss_dssp CCGGGCCCHHHHHHHHHTCGGGTTSCEEEEESCSSSBSCCCEEETCEEEEEECSSCCEE
T ss_pred CCCCCCCchhhHHHHHHHHHhcCCCcEEECCCCCCCCCceEEEECCEEEEEEcCCccEE
Confidence 75421 0011 1345678888887775544433333 6888888775444333
Done!