Query 001960
Match_columns 991
No_of_seqs 588 out of 3747
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 13:19:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001960.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001960hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 3E-211 6E-216 1769.6 70.3 950 4-990 2-966 (1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 1E-148 3E-153 1262.2 56.2 836 119-988 7-922 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 1E-141 2E-146 1333.6 91.9 848 92-950 14-873 (941)
4 TIGR01523 ATPase-IID_K-Na pota 100.0 5E-135 1E-139 1270.8 88.0 801 119-951 10-963 (1053)
5 TIGR01106 ATPase-IIC_X-K sodiu 100.0 3E-131 6E-136 1242.2 89.5 808 119-949 20-915 (997)
6 COG0474 MgtA Cation transport 100.0 2E-132 3E-137 1237.9 76.1 789 123-950 32-843 (917)
7 TIGR01522 ATPase-IIA2_Ca golgi 100.0 7E-131 2E-135 1228.4 88.8 779 119-949 7-811 (884)
8 PRK15122 magnesium-transportin 100.0 5E-127 1E-131 1187.0 83.1 766 120-949 31-829 (903)
9 PRK10517 magnesium-transportin 100.0 4E-126 9E-131 1176.7 83.0 759 120-949 53-829 (902)
10 TIGR01116 ATPase-IIA1_Ca sarco 100.0 8E-126 2E-130 1185.6 83.9 772 167-950 1-848 (917)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 8E-125 2E-129 1166.5 88.6 759 119-949 18-794 (867)
12 TIGR01647 ATPase-IIIA_H plasma 100.0 9E-117 2E-121 1081.6 83.0 721 135-951 1-729 (755)
13 KOG0203 Na+/K+ ATPase, alpha s 100.0 9E-119 2E-123 1015.2 40.9 847 117-989 40-996 (1019)
14 TIGR01657 P-ATPase-V P-type AT 100.0 1E-114 3E-119 1098.2 72.0 752 133-949 137-999 (1054)
15 TIGR01652 ATPase-Plipid phosph 100.0 3E-109 6E-114 1053.0 63.4 765 150-942 1-971 (1057)
16 PLN03190 aminophospholipid tra 100.0 4E-103 9E-108 984.1 75.1 736 148-909 85-1038(1178)
17 PRK14010 potassium-transportin 100.0 2.5E-91 5.4E-96 828.1 63.1 547 169-833 28-585 (673)
18 PRK01122 potassium-transportin 100.0 2.7E-90 5.9E-95 820.0 63.6 544 168-826 28-581 (679)
19 KOG0206 P-type ATPase [General 100.0 1.8E-94 3.9E-99 873.0 24.4 737 146-909 28-961 (1151)
20 KOG0208 Cation transport ATPas 100.0 1.4E-88 3E-93 780.8 53.7 754 132-943 157-1043(1140)
21 TIGR01497 kdpB K+-transporting 100.0 3.9E-86 8.4E-91 782.5 64.3 546 169-827 28-584 (675)
22 COG2217 ZntA Cation transport 100.0 1.9E-87 4.1E-92 794.7 44.6 651 43-834 14-682 (713)
23 KOG0210 P-type ATPase [Inorgan 100.0 1.3E-86 2.9E-91 734.2 35.2 749 145-950 74-982 (1051)
24 KOG0205 Plasma membrane H+-tra 100.0 2.2E-82 4.7E-87 698.0 38.7 634 117-826 19-659 (942)
25 PRK11033 zntA zinc/cadmium/mer 100.0 3.2E-77 7E-82 729.9 62.5 639 43-833 65-710 (741)
26 KOG0207 Cation transport ATPas 100.0 3.8E-79 8.2E-84 704.8 37.4 662 46-833 161-867 (951)
27 TIGR01494 ATPase_P-type ATPase 100.0 1.4E-76 3.1E-81 702.3 56.1 491 210-862 6-498 (499)
28 TIGR01511 ATPase-IB1_Cu copper 100.0 4.5E-74 9.8E-79 684.6 55.1 529 160-834 2-549 (562)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 4.9E-74 1.1E-78 686.7 55.3 511 200-834 18-530 (556)
30 PRK10671 copA copper exporting 100.0 5.6E-73 1.2E-77 706.8 59.6 544 159-832 233-793 (834)
31 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.3E-72 2.8E-77 670.1 56.7 502 179-834 5-509 (536)
32 KOG0209 P-type ATPase [Inorgan 100.0 6E-73 1.3E-77 637.0 42.1 741 134-942 161-1068(1160)
33 COG2216 KdpB High-affinity K+ 100.0 6.8E-59 1.5E-63 502.7 37.9 493 219-822 85-580 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.7E-33 5.8E-38 299.5 23.4 223 208-446 4-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 6.3E-23 1.4E-27 216.7 12.6 97 648-770 115-215 (215)
36 KOG4383 Uncharacterized conser 99.7 2.2E-13 4.9E-18 152.5 40.2 289 582-875 698-1149(1354)
37 PF00689 Cation_ATPase_C: Cati 99.6 9E-17 1.9E-21 165.3 5.0 110 840-949 1-113 (182)
38 COG4087 Soluble P-type ATPase 99.5 4.2E-14 9.1E-19 128.5 11.0 125 649-802 19-145 (152)
39 PF13246 Hydrolase_like2: Puta 99.5 2.3E-14 5E-19 128.6 8.8 87 507-594 2-91 (91)
40 PF12515 CaATP_NAI: Ca2+-ATPas 99.5 1.8E-14 4E-19 106.9 2.2 46 4-50 1-46 (47)
41 PRK10513 sugar phosphate phosp 99.1 2.7E-10 5.8E-15 125.0 13.0 69 736-805 195-266 (270)
42 PF00690 Cation_ATPase_N: Cati 99.1 2.3E-10 5.1E-15 97.2 7.2 68 117-186 2-69 (69)
43 PRK15126 thiamin pyrimidine py 99.0 8.4E-10 1.8E-14 121.2 11.4 144 660-804 19-259 (272)
44 COG0561 Cof Predicted hydrolas 99.0 1.3E-09 2.8E-14 119.2 12.5 144 661-805 21-259 (264)
45 PRK01158 phosphoglycolate phos 99.0 2.7E-09 5.9E-14 114.1 13.3 143 661-804 21-226 (230)
46 PRK11133 serB phosphoserine ph 99.0 1.7E-09 3.7E-14 120.2 11.6 129 660-804 181-316 (322)
47 PRK10976 putative hydrolase; P 99.0 2E-09 4.4E-14 117.8 12.1 68 736-804 189-261 (266)
48 TIGR01487 SPP-like sucrose-pho 99.0 2.2E-09 4.8E-14 113.5 11.3 142 660-802 18-214 (215)
49 TIGR02137 HSK-PSP phosphoserin 99.0 2.6E-09 5.6E-14 111.2 11.2 128 660-806 68-198 (203)
50 PLN02887 hydrolase family prot 99.0 3.5E-09 7.7E-14 125.7 12.7 68 737-805 507-577 (580)
51 smart00831 Cation_ATPase_N Cat 98.9 2.4E-09 5.1E-14 89.7 7.1 62 127-190 2-63 (64)
52 TIGR01482 SPP-subfamily Sucros 98.9 8.2E-09 1.8E-13 109.9 13.2 144 660-804 15-222 (225)
53 PF08282 Hydrolase_3: haloacid 98.9 4.4E-09 9.5E-14 113.5 11.1 145 658-803 13-254 (254)
54 PRK10530 pyridoxal phosphate ( 98.9 1.8E-08 3.9E-13 110.7 12.9 68 736-804 198-268 (272)
55 COG0560 SerB Phosphoserine pho 98.8 1.7E-08 3.6E-13 105.7 11.2 115 659-793 76-201 (212)
56 TIGR00338 serB phosphoserine p 98.8 1.1E-08 2.4E-13 108.4 10.2 128 660-802 85-218 (219)
57 TIGR01670 YrbI-phosphatas 3-de 98.8 4.7E-08 1E-12 97.4 11.7 98 668-795 36-136 (154)
58 TIGR02726 phenyl_P_delta pheny 98.8 2.8E-08 6.1E-13 99.9 9.6 102 667-798 41-145 (169)
59 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 1.8E-07 4E-12 101.7 13.9 144 661-805 17-254 (256)
60 TIGR00099 Cof-subfamily Cof su 98.7 7.3E-08 1.6E-12 104.9 10.7 66 736-802 187-255 (256)
61 PRK03669 mannosyl-3-phosphogly 98.7 2.1E-07 4.5E-12 102.1 13.5 145 661-805 25-266 (271)
62 PRK09484 3-deoxy-D-manno-octul 98.6 1.4E-07 3E-12 96.9 9.7 109 667-805 55-170 (183)
63 COG1778 Low specificity phosph 98.6 1.7E-07 3.7E-12 89.2 8.5 118 667-814 42-166 (170)
64 PRK00192 mannosyl-3-phosphogly 98.5 9.6E-07 2.1E-11 97.0 13.7 67 737-804 190-267 (273)
65 PRK13582 thrH phosphoserine ph 98.5 6.8E-07 1.5E-11 93.7 11.0 123 660-803 68-195 (205)
66 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 9.1E-07 2E-11 92.3 9.9 118 660-788 80-200 (201)
67 TIGR02471 sucr_syn_bact_C sucr 98.4 1.8E-06 3.8E-11 92.8 10.8 69 736-805 158-233 (236)
68 KOG1615 Phosphoserine phosphat 98.4 8.1E-07 1.8E-11 87.4 7.1 105 660-776 88-199 (227)
69 PLN02954 phosphoserine phospha 98.2 8E-06 1.7E-10 86.9 12.2 126 660-802 84-222 (224)
70 TIGR01485 SPP_plant-cyano sucr 98.2 8.4E-06 1.8E-10 88.3 11.9 147 658-805 19-245 (249)
71 TIGR03333 salvage_mtnX 2-hydro 98.2 7.7E-06 1.7E-10 86.4 10.9 134 659-804 69-209 (214)
72 PF12710 HAD: haloacid dehalog 98.1 5.9E-06 1.3E-10 85.4 7.2 92 663-767 92-192 (192)
73 PRK08238 hypothetical protein; 98.1 0.00025 5.3E-09 83.3 20.4 98 660-782 72-170 (479)
74 PRK13222 phosphoglycolate phos 98.0 2.8E-05 6E-10 82.7 11.5 128 659-805 92-223 (226)
75 COG0546 Gph Predicted phosphat 98.0 2.8E-05 6E-10 82.5 11.1 127 658-803 87-217 (220)
76 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.7E-05 3.6E-10 82.9 9.2 107 658-776 85-197 (202)
77 TIGR02461 osmo_MPG_phos mannos 98.0 2.4E-05 5.2E-10 83.2 10.3 43 658-700 13-55 (225)
78 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2.5E-05 5.4E-10 80.4 9.9 114 659-774 71-186 (188)
79 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.3E-05 2.7E-10 81.8 7.6 97 660-769 73-177 (177)
80 PLN02382 probable sucrose-phos 98.0 4.6E-05 9.9E-10 88.2 12.0 144 661-805 29-258 (413)
81 PRK09552 mtnX 2-hydroxy-3-keto 98.0 2.7E-05 5.9E-10 82.5 9.2 130 660-803 74-212 (219)
82 TIGR01454 AHBA_synth_RP 3-amin 97.9 6E-05 1.3E-09 79.0 10.4 125 660-803 75-203 (205)
83 cd01427 HAD_like Haloacid deha 97.9 3.3E-05 7.1E-10 74.3 7.5 117 656-773 20-137 (139)
84 TIGR02463 MPGP_rel mannosyl-3- 97.9 0.00012 2.6E-09 77.7 12.2 38 663-700 19-56 (221)
85 PRK10187 trehalose-6-phosphate 97.8 0.00014 3E-09 79.4 11.9 137 660-803 36-240 (266)
86 PRK12702 mannosyl-3-phosphogly 97.7 0.00017 3.7E-09 77.6 10.1 43 659-701 17-59 (302)
87 PRK13223 phosphoglycolate phos 97.6 0.00027 5.8E-09 77.5 10.8 123 659-803 100-229 (272)
88 PRK13288 pyrophosphatase PpaX; 97.6 0.00029 6.2E-09 74.4 10.0 125 660-803 82-210 (214)
89 TIGR01449 PGP_bact 2-phosphogl 97.6 0.00026 5.6E-09 74.5 9.6 120 660-801 85-211 (213)
90 PRK13226 phosphoglycolate phos 97.5 0.00054 1.2E-08 73.2 10.6 127 660-805 95-226 (229)
91 PRK14502 bifunctional mannosyl 97.4 0.00058 1.2E-08 81.6 10.5 40 661-700 434-473 (694)
92 PRK10826 2-deoxyglucose-6-phos 97.4 0.00062 1.3E-08 72.3 9.9 120 659-800 91-216 (222)
93 TIGR01484 HAD-SF-IIB HAD-super 97.4 0.00062 1.3E-08 71.2 8.8 116 660-775 17-204 (204)
94 TIGR01544 HAD-SF-IE haloacid d 97.3 0.0025 5.5E-08 68.9 13.1 134 659-803 120-273 (277)
95 PTZ00174 phosphomannomutase; P 97.3 0.00071 1.5E-08 73.1 8.8 53 736-790 187-244 (247)
96 PRK13225 phosphoglycolate phos 97.3 0.0019 4.1E-08 70.7 11.7 119 660-803 142-267 (273)
97 TIGR03351 PhnX-like phosphonat 97.2 0.002 4.3E-08 68.2 10.4 126 659-802 86-218 (220)
98 TIGR01545 YfhB_g-proteo haloac 97.2 0.0022 4.8E-08 67.3 10.3 107 660-776 94-201 (210)
99 PLN03243 haloacid dehalogenase 97.2 0.0024 5.1E-08 69.4 10.8 122 660-800 109-231 (260)
100 PLN02770 haloacid dehalogenase 97.2 0.0026 5.5E-08 68.9 11.0 120 660-798 108-230 (248)
101 PRK14501 putative bifunctional 97.1 0.0039 8.5E-08 78.1 13.8 137 660-803 514-720 (726)
102 PRK13478 phosphonoacetaldehyde 97.1 0.0032 6.8E-08 69.0 11.3 122 660-803 101-254 (267)
103 TIGR01422 phosphonatase phosph 97.1 0.003 6.4E-08 68.6 10.9 93 660-772 99-196 (253)
104 PRK11590 hypothetical protein; 97.1 0.0037 8E-08 65.8 11.0 107 660-776 95-202 (211)
105 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.0015 3.2E-08 68.0 7.9 94 658-769 104-197 (197)
106 PF05116 S6PP: Sucrose-6F-phos 97.1 0.0027 5.8E-08 68.6 10.0 69 736-805 164-244 (247)
107 PRK06698 bifunctional 5'-methy 96.9 0.0059 1.3E-07 72.3 11.6 124 660-805 330-455 (459)
108 COG4030 Uncharacterized protei 96.9 0.0054 1.2E-07 62.2 9.3 143 660-804 83-262 (315)
109 PRK11587 putative phosphatase; 96.8 0.0058 1.2E-07 64.7 9.9 115 660-793 83-199 (218)
110 TIGR01672 AphA HAD superfamily 96.8 0.003 6.6E-08 67.2 7.2 88 661-772 115-206 (237)
111 smart00775 LNS2 LNS2 domain. T 96.7 0.0091 2E-07 59.6 9.4 103 658-772 25-141 (157)
112 PRK06769 hypothetical protein; 96.6 0.0086 1.9E-07 60.9 8.5 137 647-802 11-170 (173)
113 PLN02575 haloacid dehalogenase 96.5 0.017 3.6E-07 65.6 11.4 121 660-800 216-338 (381)
114 TIGR02253 CTE7 HAD superfamily 96.5 0.011 2.3E-07 62.6 9.3 93 660-772 94-190 (221)
115 TIGR00685 T6PP trehalose-phosp 96.4 0.01 2.2E-07 63.9 8.8 67 732-803 162-239 (244)
116 PRK11009 aphA acid phosphatase 96.4 0.007 1.5E-07 64.4 7.3 87 660-772 114-206 (237)
117 TIGR01428 HAD_type_II 2-haloal 96.4 0.0096 2.1E-07 61.9 8.3 95 660-773 92-188 (198)
118 TIGR01662 HAD-SF-IIIA HAD-supe 96.4 0.015 3.4E-07 56.0 8.8 90 659-772 24-126 (132)
119 PRK08942 D,D-heptose 1,7-bisph 96.3 0.021 4.7E-07 58.4 10.1 127 660-803 29-176 (181)
120 TIGR01990 bPGM beta-phosphoglu 96.3 0.0068 1.5E-07 62.1 6.1 92 660-772 87-180 (185)
121 PRK14988 GMP/IMP nucleotidase; 96.3 0.014 2.9E-07 62.1 8.3 94 660-773 93-189 (224)
122 TIGR01509 HAD-SF-IA-v3 haloaci 96.2 0.016 3.5E-07 59.1 8.4 95 660-772 85-179 (183)
123 COG4359 Uncharacterized conser 96.1 0.013 2.7E-07 57.9 6.6 99 660-774 73-183 (220)
124 TIGR02254 YjjG/YfnB HAD superf 96.1 0.019 4E-07 60.8 8.5 120 660-801 97-222 (224)
125 PHA02530 pseT polynucleotide k 96.1 0.013 2.8E-07 65.3 7.4 109 657-773 184-292 (300)
126 PLN02580 trehalose-phosphatase 96.1 0.055 1.2E-06 61.4 12.3 64 736-804 300-374 (384)
127 PRK09449 dUMP phosphatase; Pro 96.0 0.027 5.9E-07 59.7 9.2 121 660-803 95-222 (224)
128 TIGR02009 PGMB-YQAB-SF beta-ph 95.9 0.013 2.9E-07 59.9 6.3 92 659-772 87-181 (185)
129 TIGR01685 MDP-1 magnesium-depe 95.9 0.043 9.3E-07 55.6 9.4 113 649-774 34-154 (174)
130 PF13419 HAD_2: Haloacid dehal 95.8 0.012 2.5E-07 59.2 5.2 98 658-772 75-172 (176)
131 PLN02940 riboflavin kinase 95.8 0.03 6.4E-07 64.5 8.9 116 660-793 93-212 (382)
132 PLN02779 haloacid dehalogenase 95.7 0.038 8.2E-07 61.1 9.1 122 660-800 144-269 (286)
133 PF06888 Put_Phosphatase: Puta 95.7 0.045 9.7E-07 58.0 9.0 112 660-773 71-195 (234)
134 TIGR01549 HAD-SF-IA-v1 haloaci 95.4 0.044 9.5E-07 54.3 7.3 89 660-770 64-154 (154)
135 PLN02205 alpha,alpha-trehalose 95.4 0.14 3E-06 64.7 13.2 45 660-704 616-664 (854)
136 COG2179 Predicted hydrolase of 95.3 0.13 2.8E-06 50.5 9.8 110 616-771 20-132 (175)
137 smart00577 CPDc catalytic doma 95.2 0.03 6.4E-07 55.4 5.4 95 657-774 42-139 (148)
138 COG3769 Predicted hydrolase (H 95.2 0.15 3.2E-06 52.1 10.1 37 664-700 27-63 (274)
139 TIGR01656 Histidinol-ppas hist 95.1 0.052 1.1E-06 53.5 6.9 97 660-773 27-141 (147)
140 TIGR01668 YqeG_hyp_ppase HAD s 95.1 0.077 1.7E-06 53.7 8.2 86 659-772 42-131 (170)
141 TIGR00213 GmhB_yaeD D,D-heptos 95.1 0.082 1.8E-06 53.9 8.3 125 661-799 27-174 (176)
142 TIGR02252 DREG-2 REG-2-like, H 95.0 0.065 1.4E-06 55.8 7.4 92 660-772 105-200 (203)
143 TIGR01675 plant-AP plant acid 94.8 0.12 2.6E-06 54.5 8.7 88 658-763 118-209 (229)
144 PLN02811 hydrolase 94.6 0.089 1.9E-06 55.7 7.4 97 660-773 78-180 (220)
145 TIGR01533 lipo_e_P4 5'-nucleot 94.5 0.15 3.1E-06 55.4 8.7 87 658-767 116-205 (266)
146 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.4 0.21 4.4E-06 53.8 9.8 94 653-770 17-115 (242)
147 TIGR01261 hisB_Nterm histidino 94.1 0.089 1.9E-06 52.7 5.7 98 660-774 29-144 (161)
148 PLN02919 haloacid dehalogenase 93.9 0.23 5E-06 64.6 10.3 115 660-793 161-281 (1057)
149 PRK05446 imidazole glycerol-ph 93.7 0.14 3.1E-06 57.8 7.1 99 659-774 29-145 (354)
150 TIGR01664 DNA-3'-Pase DNA 3'-p 93.7 0.19 4.2E-06 50.6 7.4 91 661-773 43-158 (166)
151 TIGR01681 HAD-SF-IIIC HAD-supe 93.6 0.16 3.6E-06 48.7 6.3 39 660-698 29-68 (128)
152 PRK10563 6-phosphogluconate ph 93.3 0.089 1.9E-06 55.6 4.4 96 660-775 88-184 (221)
153 TIGR01458 HAD-SF-IIA-hyp3 HAD- 93.0 0.87 1.9E-05 49.5 11.6 48 653-700 10-64 (257)
154 TIGR01691 enolase-ppase 2,3-di 92.9 0.39 8.4E-06 50.7 8.4 98 658-774 93-193 (220)
155 TIGR02247 HAD-1A3-hyp Epoxide 92.9 0.13 2.8E-06 54.0 4.8 98 659-773 93-192 (211)
156 TIGR01686 FkbH FkbH-like domai 92.8 0.23 5E-06 55.8 7.1 91 660-775 31-128 (320)
157 PLN03017 trehalose-phosphatase 92.8 1.7 3.6E-05 49.2 13.6 63 736-803 282-355 (366)
158 PF13344 Hydrolase_6: Haloacid 92.8 0.17 3.8E-06 46.3 4.9 89 653-770 7-99 (101)
159 PLN02423 phosphomannomutase 91.7 0.75 1.6E-05 49.6 9.1 39 736-776 188-231 (245)
160 PF08235 LNS2: LNS2 (Lipin/Ned 91.6 0.97 2.1E-05 44.7 8.8 103 658-772 25-141 (157)
161 PRK09456 ?-D-glucose-1-phospha 91.5 0.33 7.2E-06 50.4 6.0 95 660-773 84-181 (199)
162 KOG3120 Predicted haloacid deh 91.4 0.28 6E-06 50.3 4.9 121 660-782 84-215 (256)
163 TIGR01993 Pyr-5-nucltdase pyri 89.7 0.77 1.7E-05 46.9 6.6 93 660-773 84-181 (184)
164 PRK10725 fructose-1-P/6-phosph 89.3 0.76 1.7E-05 47.0 6.3 93 662-773 90-182 (188)
165 PRK10444 UMP phosphatase; Prov 89.2 1.6 3.4E-05 47.2 8.8 48 653-700 10-60 (248)
166 PF03767 Acid_phosphat_B: HAD 89.0 0.45 9.8E-06 50.6 4.3 91 658-765 113-207 (229)
167 PLN02645 phosphoglycolate phos 89.0 0.76 1.6E-05 51.5 6.4 49 653-701 37-88 (311)
168 PHA02597 30.2 hypothetical pro 88.4 0.93 2E-05 46.9 6.2 94 660-773 74-170 (197)
169 PF09419 PGP_phosphatase: Mito 87.8 1.7 3.6E-05 43.7 7.2 83 658-766 57-153 (168)
170 KOG3040 Predicted sugar phosph 87.8 3.2 7E-05 42.3 9.0 51 650-700 13-66 (262)
171 TIGR01684 viral_ppase viral ph 85.3 1.9 4.2E-05 46.9 6.6 52 661-712 146-198 (301)
172 COG0637 Predicted phosphatase/ 85.2 1.8 3.8E-05 45.9 6.3 100 658-774 84-183 (221)
173 TIGR01680 Veg_Stor_Prot vegeta 84.3 4.6 0.0001 43.6 8.8 88 658-763 143-235 (275)
174 PLN02177 glycerol-3-phosphate 83.3 11 0.00024 44.9 12.3 98 661-777 111-215 (497)
175 TIGR01452 PGP_euk phosphoglyco 82.9 9.7 0.00021 41.8 11.1 48 654-701 12-62 (279)
176 PRK10748 flavin mononucleotide 81.6 3.7 8.1E-05 43.9 7.1 91 660-776 113-207 (238)
177 PHA03398 viral phosphatase sup 81.5 3.5 7.6E-05 45.1 6.6 51 661-711 148-199 (303)
178 PLN02151 trehalose-phosphatase 80.8 15 0.00032 41.6 11.5 63 736-803 268-341 (354)
179 COG3700 AphA Acid phosphatase 79.7 5.1 0.00011 39.8 6.4 86 662-771 116-205 (237)
180 TIGR01689 EcbF-BcbF capsule bi 79.2 3.9 8.4E-05 39.1 5.4 31 659-689 23-53 (126)
181 TIGR01457 HAD-SF-IIA-hyp2 HAD- 77.8 4.6 9.9E-05 43.6 6.3 49 653-701 10-61 (249)
182 PF02358 Trehalose_PPase: Treh 76.6 3.4 7.5E-05 44.1 4.9 64 729-793 157-233 (235)
183 TIGR02251 HIF-SF_euk Dullard-l 74.8 2.2 4.8E-05 42.8 2.6 95 656-773 38-135 (162)
184 TIGR01663 PNK-3'Pase polynucle 73.9 8.6 0.00019 46.0 7.6 40 661-700 198-249 (526)
185 TIGR01106 ATPase-IIC_X-K sodiu 72.6 72 0.0016 41.9 16.2 195 210-426 117-324 (997)
186 COG1877 OtsB Trehalose-6-phosp 72.0 17 0.00037 39.4 8.7 125 652-776 32-228 (266)
187 TIGR01493 HAD-SF-IA-v2 Haloaci 70.7 3.5 7.5E-05 41.6 3.0 83 660-768 90-174 (175)
188 COG1011 Predicted hydrolase (H 70.0 31 0.00066 36.2 10.2 121 660-803 99-226 (229)
189 TIGR01657 P-ATPase-V P-type AT 67.6 2.4E+02 0.0051 37.4 19.5 20 259-278 237-256 (1054)
190 COG0241 HisB Histidinol phosph 67.6 23 0.0005 36.1 7.9 97 661-772 32-144 (181)
191 PF00403 HMA: Heavy-metal-asso 64.6 0.46 1E-05 39.0 -4.0 52 44-97 11-62 (62)
192 PF00389 2-Hacid_dh: D-isomer 64.4 1.2E+02 0.0025 29.0 12.1 84 657-776 3-89 (133)
193 PF05822 UMPH-1: Pyrimidine 5' 63.9 29 0.00062 37.1 8.1 132 659-803 89-241 (246)
194 TIGR02244 HAD-IG-Ncltidse HAD 63.3 25 0.00055 39.7 8.1 106 662-771 186-317 (343)
195 PTZ00445 p36-lilke protein; Pr 62.9 56 0.0012 34.1 9.7 138 610-771 29-199 (219)
196 TIGR01647 ATPase-IIIA_H plasma 62.7 1.4E+02 0.0031 37.8 15.6 194 207-431 58-263 (755)
197 TIGR01116 ATPase-IIA1_Ca sarco 58.7 2.2E+02 0.0047 37.1 16.6 79 204-292 36-115 (917)
198 PF12689 Acid_PPase: Acid Phos 55.4 34 0.00074 34.5 6.7 41 660-700 45-86 (169)
199 PLN03063 alpha,alpha-trehalose 49.5 2.2E+02 0.0049 36.3 14.2 38 661-698 533-571 (797)
200 TIGR00216 ispH_lytB (E)-4-hydr 47.6 1.4E+02 0.003 32.8 10.3 172 576-780 69-265 (280)
201 PRK10517 magnesium-transportin 46.8 5.9E+02 0.013 33.1 17.5 42 244-286 184-225 (902)
202 PF00122 E1-E2_ATPase: E1-E2 A 46.5 1.6E+02 0.0034 31.0 10.6 145 210-364 2-160 (230)
203 PRK01045 ispH 4-hydroxy-3-meth 42.9 1.5E+02 0.0032 32.9 9.7 174 576-781 69-268 (298)
204 TIGR01522 ATPase-IIA2_Ca golgi 42.8 6.4E+02 0.014 32.7 17.1 40 245-285 137-176 (884)
205 COG0647 NagD Predicted sugar p 40.7 31 0.00068 37.5 4.0 94 653-775 17-115 (269)
206 PF13242 Hydrolase_like: HAD-h 40.3 37 0.00079 28.9 3.7 44 750-793 21-71 (75)
207 PRK14184 bifunctional 5,10-met 40.0 1.4E+02 0.003 32.9 8.9 63 730-793 136-211 (286)
208 PF13380 CoA_binding_2: CoA bi 39.7 28 0.00062 32.6 3.2 40 661-700 64-104 (116)
209 TIGR01524 ATPase-IIIB_Mg magne 39.2 5.2E+02 0.011 33.5 15.3 41 244-285 150-190 (867)
210 PRK14189 bifunctional 5,10-met 38.7 3.4E+02 0.0074 29.9 11.6 166 604-793 11-208 (285)
211 PRK00208 thiG thiazole synthas 38.7 2E+02 0.0043 30.8 9.4 50 647-696 91-143 (250)
212 TIGR02250 FCP1_euk FCP1-like p 36.0 53 0.0012 32.6 4.6 43 657-700 55-97 (156)
213 COG0078 ArgF Ornithine carbamo 35.9 3E+02 0.0064 30.5 10.4 75 677-775 100-180 (310)
214 TIGR01460 HAD-SF-IIA Haloacid 35.8 70 0.0015 34.1 5.9 47 654-700 8-58 (236)
215 TIGR00612 ispG_gcpE 1-hydroxy- 34.8 1.2E+02 0.0027 33.8 7.4 91 667-776 214-315 (346)
216 TIGR01456 CECR5 HAD-superfamil 34.3 1.3E+02 0.0029 33.7 8.1 48 653-700 9-64 (321)
217 TIGR01459 HAD-SF-IIA-hyp4 HAD- 33.8 32 0.0007 36.8 2.9 97 662-773 140-237 (242)
218 PRK14188 bifunctional 5,10-met 33.7 5.5E+02 0.012 28.5 12.4 166 604-793 10-208 (296)
219 PRK14194 bifunctional 5,10-met 33.6 4.7E+02 0.01 29.0 11.8 166 604-793 12-209 (301)
220 PF03120 DNA_ligase_OB: NAD-de 33.1 22 0.00047 31.2 1.1 22 251-272 45-67 (82)
221 PRK14179 bifunctional 5,10-met 32.6 7.1E+02 0.015 27.4 13.2 166 604-793 10-208 (284)
222 PRK15122 magnesium-transportin 32.5 1.2E+03 0.027 30.2 18.2 158 244-426 173-349 (903)
223 PRK14170 bifunctional 5,10-met 32.3 1.9E+02 0.0042 31.7 8.4 45 657-701 10-63 (284)
224 PF04551 GcpE: GcpE protein; 30.7 2.7E+02 0.0058 31.5 9.2 141 612-776 162-324 (359)
225 PF02401 LYTB: LytB protein; 30.3 30 0.00065 37.9 1.9 169 580-781 71-267 (281)
226 PRK14042 pyruvate carboxylase 30.0 1.6E+02 0.0034 36.1 8.0 116 654-773 87-223 (596)
227 PF01455 HupF_HypC: HupF/HypC 29.9 1.1E+02 0.0025 25.7 4.9 33 237-269 16-51 (68)
228 PF12710 HAD: haloacid dehalog 29.5 26 0.00056 35.5 1.2 14 453-466 1-14 (192)
229 TIGR01517 ATPase-IIB_Ca plasma 28.5 1.4E+03 0.031 29.7 17.3 175 244-429 185-359 (941)
230 PRK14174 bifunctional 5,10-met 27.8 7.3E+02 0.016 27.5 12.1 165 604-793 9-213 (295)
231 PRK11507 ribosome-associated p 27.5 66 0.0014 27.2 3.0 26 241-266 38-63 (70)
232 cd00860 ThrRS_anticodon ThrRS 27.0 1.4E+02 0.003 26.0 5.3 47 654-700 6-53 (91)
233 PRK12360 4-hydroxy-3-methylbut 26.9 3.9E+02 0.0085 29.4 9.7 171 578-781 74-267 (281)
234 TIGR01452 PGP_euk phosphoglyco 26.8 1.4E+02 0.0031 32.6 6.5 97 662-773 145-243 (279)
235 PF15584 Imm44: Immunity prote 26.7 27 0.00058 30.9 0.6 20 258-277 13-32 (94)
236 COG1916 Uncharacterized homolo 25.1 4E+02 0.0087 30.2 9.3 40 661-700 97-136 (388)
237 PRK11840 bifunctional sulfur c 25.0 3E+02 0.0066 30.8 8.4 50 647-696 165-217 (326)
238 PRK14186 bifunctional 5,10-met 24.4 3.9E+02 0.0084 29.6 9.1 63 730-793 137-208 (297)
239 cd05017 SIS_PGI_PMI_1 The memb 24.4 1.2E+02 0.0027 28.2 4.7 39 659-699 53-91 (119)
240 PF06941 NT5C: 5' nucleotidase 24.3 91 0.002 31.9 4.2 41 660-700 73-121 (191)
241 PLN02591 tryptophan synthase 24.1 3.6E+02 0.0079 29.1 8.8 78 663-763 118-201 (250)
242 PF13275 S4_2: S4 domain; PDB: 23.9 47 0.001 27.7 1.5 23 242-264 35-57 (65)
243 cd05013 SIS_RpiR RpiR-like pro 23.9 3.2E+02 0.0068 25.5 7.7 107 664-776 2-112 (139)
244 PF06506 PrpR_N: Propionate ca 23.0 2.1E+02 0.0045 28.9 6.4 106 665-815 66-172 (176)
245 COG2503 Predicted secreted aci 22.9 3.6E+02 0.0079 28.8 8.0 87 660-769 122-212 (274)
246 PF14336 DUF4392: Domain of un 22.5 1.7E+02 0.0038 32.3 6.1 38 663-700 63-101 (291)
247 PRK14166 bifunctional 5,10-met 21.2 1.1E+03 0.024 26.0 11.7 166 604-793 9-207 (282)
248 PF02254 TrkA_N: TrkA-N domain 20.9 6.1E+02 0.013 23.0 8.8 99 665-773 10-112 (116)
249 COG1188 Ribosome-associated he 20.8 98 0.0021 28.2 3.0 31 237-270 33-63 (100)
250 PRK00087 4-hydroxy-3-methylbut 20.5 4.6E+02 0.0099 32.7 9.9 140 610-780 100-263 (647)
251 PF08645 PNK3P: Polynucleotide 20.3 83 0.0018 31.3 2.8 24 662-685 31-54 (159)
252 smart00306 HintN Hint (Hedgeho 20.3 1.1E+02 0.0024 27.0 3.5 29 237-265 71-99 (100)
253 PRK14182 bifunctional 5,10-met 20.3 1.2E+03 0.025 25.7 11.9 164 604-793 9-207 (282)
254 PF03129 HGTP_anticodon: Antic 20.1 2.1E+02 0.0046 25.1 5.2 48 653-700 3-54 (94)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-211 Score=1769.61 Aligned_cols=950 Identities=59% Similarity=0.903 Sum_probs=890.2
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhcccccccccchhhhccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCC
Q 001960 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS 83 (991)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~f~~~~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 83 (991)
++.++|. .+.+|++.++++|||.|. .+++++|||||..++++..+....|+ +.|+...+.+|+..|.++. +.+
T Consensus 2 ~~~~~~~-~~~~n~~~~~~~~~~~a~-~~~~~~~~~~~~~~l~~~~~~~~~r~----~~r~~~~~~~a~~~~~~~~-~~~ 74 (1034)
T KOG0204|consen 2 LLDKDFV-VSMKNSSIEALQRWRLAY-IVLEASRRFRFGASLKKLRELMEPRR----KIRSAVLVSKAAALFIDAG-SRT 74 (1034)
T ss_pred Ccccccc-cccccchhhhhhhhhhhh-hhcccchhhccccCHHHHHHHHHHHh----hhhhhhcccchhhhhhccc-ccc
Confidence 3456676 788899999999999887 99999999999999998887655555 8899999999999998873 222
Q ss_pred ccccccccccCCcccChhhhhhhhccCChHHHHhhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccH
Q 001960 84 EYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGF 163 (991)
Q Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f 163 (991)
++.+ +++++++.+++++++.+.|.++||++|+|+.|+||+..||+.+++++.+|++.||+|.+|++++++|
T Consensus 75 e~~~---------~i~~e~l~~i~~~~~~~~L~~~gGv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~F 145 (1034)
T KOG0204|consen 75 EYTL---------GIGAEELVKIVKEHDLKALNAYGGVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGF 145 (1034)
T ss_pred cccc---------ccCHHHHHHHhhccchhhhhhccCHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccH
Confidence 2222 7888999999999999999999999999999999999999998888999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEE
Q 001960 164 WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA 243 (991)
Q Consensus 164 ~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~ 243 (991)
|+++||+++|.++++|++||++|+++++++++++++|||+++|++++++|++++|++||+|++||++|++++.+.+++|+
T Consensus 146 l~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~Vi 225 (1034)
T KOG0204|consen 146 LRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVI 225 (1034)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccC-CCCeEEeccEEecCeEEEEEEE
Q 001960 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTT 322 (991)
Q Consensus 244 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~-~~~~l~sGt~v~~g~~~~~V~~ 322 (991)
|||++++|++.|||||||+.|+.||+|||||++++|++|.||||+|||||++++|+. .+|||+|||++.+|+|+|+||+
T Consensus 226 R~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTa 305 (1034)
T KOG0204|consen 226 RGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTA 305 (1034)
T ss_pred ECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEE
Confidence 999999999999999999999999999999999999999999999999999999986 8999999999999999999999
Q ss_pred EeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCc--cccCCcChHHHHHH
Q 001960 323 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEF 400 (991)
Q Consensus 323 ~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 400 (991)
+|+||+||++|..+.....++||||.+++++|..|+++++.+|++++++++++|+......+.. +.|.......++++
T Consensus 306 VGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~ 385 (1034)
T KOG0204|consen 306 VGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKF 385 (1034)
T ss_pred eeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHH
Confidence 9999999999999999998999999999999999999999999999999999999877654443 55665557789999
Q ss_pred HHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeee
Q 001960 401 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 480 (991)
Q Consensus 401 ~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 480 (991)
|.++++++|+|+|||||||||+++|++++||++|++|||+++|||+||++++||+|||||||+|+|+|++.|++++.+..
T Consensus 386 f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~ 465 (1034)
T KOG0204|consen 386 FIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKV 465 (1034)
T ss_pred hhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887764
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCC--ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecC
Q 001960 481 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPF 558 (991)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~--~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF 558 (991)
+... ...+++...+++.++++.|++..+..++.+ ++++.|||||+||+.|+..+|+++++.|++.++++++||
T Consensus 466 ~~~~-----~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 466 NSPK-----SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred cCcc-----cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 3321 156889999999999999999999987765 889999999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEeCCCe-EEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC
Q 001960 559 NSVKKQMGVVIELPEGG-FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (991)
Q Consensus 559 ~s~~k~msviv~~~~~~-~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~ 637 (991)
||.||+|+++++.++++ | +|||||+|+|+++|+++++++|+..+++++.++.+++.|+.||++||||+|+|||++...
T Consensus 541 NS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred CcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 99999999999988877 6 999999999999999999999999999999999999999999999999999999996543
Q ss_pred ----CC-CCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCc
Q 001960 638 ----FS-ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP 710 (991)
Q Consensus 638 ----~~-~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~vi~g~ 710 (991)
++ ++++.++.+++++|++||+||+||||+++|+.|++|||+|.|+||||..||++||.+|||.++++ .+++|+
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 22 22357789999999999999999999999999999999999999999999999999999999887 999999
Q ss_pred ccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEE
Q 001960 711 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 790 (991)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~v 790 (991)
+|++++++++++++|+++|+||++|.||+.+|+.|+++ |++|+++|||+||+|||++||||+|||++|||+|||+||||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDII 778 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDII 778 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeE
Confidence 99999999999999999999999999999999999988 99999999999999999999999999999999999999999
Q ss_pred eccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCc
Q 001960 791 ILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNG 870 (991)
Q Consensus 791 l~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~ 870 (991)
|+||||++|+++++|||++|+||+||+||||++|+++++++|++++..+.+||+++||||+|+|||+|++||||||||++
T Consensus 779 i~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~ 858 (1034)
T KOG0204|consen 779 ILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTD 858 (1034)
T ss_pred EEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCC--cccchhHHHHHHHHHHHHHHHHhhccc
Q 001960 871 DLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD--PDLILNTLIFNTFVFCQLQRDGKDKRL 948 (991)
Q Consensus 871 ~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~t~~f~~~v~~q~~n~~~~r~~ 948 (991)
++|+|+|++|++|||++.||++|++|++||++++|.++|.|..+|+.+++. .+..++|++||+||+||+||+||+|++
T Consensus 859 ~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki 938 (1034)
T KOG0204|consen 859 ELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKI 938 (1034)
T ss_pred HHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcch
Confidence 999999999999999999999999999999999999999999999877764 367889999999999999999999999
Q ss_pred cccchhhhhhcccccccccccCccccceeeeecCccceeeec
Q 001960 949 QGYTEELCLCSCAHLHRSFSNNNHRAPGYICKYNSSQFATVV 990 (991)
Q Consensus 949 ~~~~~~l~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 990 (991)
++. ..|...++|+.|+.++--...+||+
T Consensus 939 ~~~--------------NvFkgi~~N~~F~~ii~~T~v~Qvi 966 (1034)
T KOG0204|consen 939 DER--------------NVFKGIFRNRLFCVIITITVVSQVI 966 (1034)
T ss_pred hHH--------------hHHHHHhcCceEEEEeeeeeehhhh
Confidence 854 4567777888888887776666653
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-148 Score=1262.20 Aligned_cols=836 Identities=33% Similarity=0.502 Sum_probs=712.5
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~ 198 (991)
..+++.+..|.|+++.||+.++ +.+|++.||.|+++...+.|+|+.+++||.++...+|+++|++|+++..
T Consensus 7 ~~v~e~~~~f~t~~~~GLt~~e--v~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~------- 77 (972)
T KOG0202|consen 7 KSVSEVLAEFGTDLEEGLTSDE--VTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD------- 77 (972)
T ss_pred CcHHHHHHHhCcCcccCCCHHH--HHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh-------
Confidence 4588999999999999999987 9999999999999999999999999999999999999999999999874
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEe
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 278 (991)
|-|+++|.+++++++.+..+++|+.+++.+.|.+. .+..++|+|+|+.+.++++||||||||.|+.||+||||.++++
T Consensus 78 -~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l-~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e 155 (972)
T KOG0202|consen 78 -FDEPFVITLIIVINVTVGFVQEYNAEKALEALKEL-VPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIE 155 (972)
T ss_pred -cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhc-CCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEe
Confidence 45788899999999999999999999999999874 5569999999999999999999999999999999999999999
Q ss_pred ecceEEecccCCCCCcceecc-------------CCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCCh
Q 001960 279 GFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETP 345 (991)
Q Consensus 279 g~~l~VDeS~LTGES~pv~k~-------------~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~ 345 (991)
..++.||||+|||||.|+.|. ...+++|+||.|..|.++++|++||.+|++|++...+.+.++++||
T Consensus 156 ~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTP 235 (972)
T KOG0202|consen 156 AKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTP 235 (972)
T ss_pred eeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCCc
Confidence 999999999999999999993 2356899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Q 001960 346 LQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLA 425 (991)
Q Consensus 346 lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~ 425 (991)
||+++|.+...+..+..++++.+++.- ++++.. -.++ +.+...+..+|.+++++.|+++|||||..+|++++
T Consensus 236 Lqk~ld~~G~qLs~~is~i~v~v~~~n-ig~f~~-p~~~------g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLA 307 (972)
T KOG0202|consen 236 LQKKLDEFGKQLSKVISFICVGVWLLN-IGHFLD-PVHG------GSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLA 307 (972)
T ss_pred HHHHHHHHHHHHHHHheehhhhHHHhh-hhhhcc-cccc------ccchhchhhhhhHHHHHHHHhccCCCcchhhhhHH
Confidence 999999999998866554444433321 122210 0111 11223577899999999999999999999999999
Q ss_pred HHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeec------CCCCCC----------CC
Q 001960 426 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD------NSKGTP----------AF 489 (991)
Q Consensus 426 ~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~~~----------~~ 489 (991)
.+.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++|+.+...... .....+ ..
T Consensus 308 LG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 308 LGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCcccc
Confidence 99999999999999999999999999999999999999999999999876543211 000000 01
Q ss_pred CCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHH---------------HhhhcceEE
Q 001960 490 GSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA---------------ERQASKIVK 554 (991)
Q Consensus 490 ~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~---------------~~~~~~il~ 554 (991)
......+.+.-+.+..+.|+.+.+..++.+.++..|.|+|.||..++.+.|+.-.. ..+.++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~ 467 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIA 467 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhhee
Confidence 11223344445556666777777776654566669999999999999998875432 122345668
Q ss_pred EecCCCCCceEEEEEEeCCC--eEEEEEcCchHHHHHhccccccCCC-eeecCCHHHHHHHHHHHHHHHHcccceeeeeE
Q 001960 555 VEPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLAC 631 (991)
Q Consensus 555 ~~pF~s~~k~msviv~~~~~--~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~ 631 (991)
++||+|+||+|||.+..+.+ ++.+|+|||+|.|+++|+.++..+| ...||++..|+.+.+...+|+++|||||++|+
T Consensus 468 elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~ 547 (972)
T KOG0202|consen 468 ELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALAS 547 (972)
T ss_pred EeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEc
Confidence 99999999999999986544 4899999999999999988887776 55999999999999999999999999999999
Q ss_pred EecCCC--------CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q 001960 632 MEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 703 (991)
Q Consensus 632 ~~l~~~--------~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~ 703 (991)
++.+.. ...++...|.||+|+|++|+.||||++++++|+.|+++||+|+|+|||+..||.+||+++|+...+
T Consensus 548 ~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ 627 (972)
T KOG0202|consen 548 KDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSED 627 (972)
T ss_pred cCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCC
Confidence 977631 122345678999999999999999999999999999999999999999999999999999998776
Q ss_pred c----eeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCC
Q 001960 704 G----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 779 (991)
Q Consensus 704 ~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g 779 (991)
. .+++|++|+.++++++++...+..+|+|++|.+|.++|+.||++ |++|+|+|||+||+||||.||||||||++|
T Consensus 628 ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAMTGDGVNDApALK~AdIGIAMG~~G 706 (972)
T KOG0202|consen 628 EDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAMTGDGVNDAPALKKADIGIAMGISG 706 (972)
T ss_pred ccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEecCCCccchhhhhhcccceeecCCc
Confidence 6 78999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred cHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHH
Q 001960 780 TEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLG 859 (991)
Q Consensus 780 ~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~ 859 (991)
||+||++||+|+.||||++|+.++++||.+|+||++|+.|++..|+.++...++++.+..+.||+|+|+||+|++||.+|
T Consensus 707 TdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~P 786 (972)
T KOG0202|consen 707 TDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPP 786 (972)
T ss_pred cHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHH---HHHhc-ccccccC-------------CCC-
Q 001960 860 ALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWY---LQTRG-KAVFRLD-------------GPD- 921 (991)
Q Consensus 860 ~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---l~~~~-~~~~~~~-------------~~~- 921 (991)
|.+|+.|||++++|+|||+++++++++.+.+..++..++|..+.... ..|.+ ....... +.+
T Consensus 787 A~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c 866 (972)
T KOG0202|consen 787 ATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRC 866 (972)
T ss_pred hhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccch
Confidence 99999999999999999999999999999988888888776543222 22221 0000000 000
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHhhccccccchhhhhhcccccccccccCccccceeeeecCccceee
Q 001960 922 ---PDLILNTLIFNTFVFCQLQRDGKDKRLQGYTEELCLCSCAHLHRSFSNNNHRAPGYICKYNSSQFAT 988 (991)
Q Consensus 922 ---~~~~~~t~~f~~~v~~q~~n~~~~r~~~~~~~~l~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 988 (991)
......||.|..||+...||.+|||+...+ .|.+.+|.|.||..+...|..+.
T Consensus 867 ~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~s--------------lf~~~~~~N~~l~~ai~~S~~~~ 922 (972)
T KOG0202|consen 867 AVFEDMCPLTMALTVLVFIEMFNALNCLSENKS--------------LFTMPPWSNRWLLWAIALSFVLH 922 (972)
T ss_pred hhhcccccceEEEeehhHHHHHHHhhcccCCcc--------------eEEecccccHHHHHHHHHHHHhh
Confidence 001235999999999999999999998765 23445555666555555444433
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=1.1e-141 Score=1333.58 Aligned_cols=848 Identities=51% Similarity=0.813 Sum_probs=745.5
Q ss_pred ccCCcccChhhhhhhhcc-CChHHHHhhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHH
Q 001960 92 AASGFQICPDELGSIVEG-HDIKKLKVHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEA 170 (991)
Q Consensus 92 ~~~g~~~~~~~~~~~~~~-~~~~~l~~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~ 170 (991)
...||.+...++.+..+. ++.+.|..+||++++++.|+++...||+.+++++++|+++||+|+++.++++++|+.++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~ 93 (941)
T TIGR01517 14 FTDGFDVGVSILTDLTDIFKRAPIYEKLGGAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAA 93 (941)
T ss_pred cCCCCCCCHHHHHHhcCchhhHHHHHHhCCHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHH
Confidence 457899999999998865 4677888999999999999999999999333349999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHHHHHhhhc-----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeC
Q 001960 171 LHDMTLMILAVCALVSLVVGIA-----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN 245 (991)
Q Consensus 171 ~~~~~~~illi~ai~s~~~~~~-----~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~ 245 (991)
|+++++++|++++++++++++. .++..+.|++++.++++++++++++++++|+++++++++++..++.+++|+||
T Consensus 94 f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRd 173 (941)
T TIGR01517 94 LSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRG 173 (941)
T ss_pred HhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 9999999999999999998753 23334689999999999999999999999999999999987666779999999
Q ss_pred CeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCC-CCeEEeccEEecCeEEEEEEEEe
Q 001960 246 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVG 324 (991)
Q Consensus 246 G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~-~~~l~sGt~v~~g~~~~~V~~~G 324 (991)
|++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.|.+|.++++|++||
T Consensus 174 G~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG 253 (941)
T TIGR01517 174 GQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVG 253 (941)
T ss_pred CEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeC
Confidence 99999999999999999999999999999999997799999999999999999754 46899999999999999999999
Q ss_pred ccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHH
Q 001960 325 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIA 404 (991)
Q Consensus 325 ~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (991)
.+|++||+++++.+++ +++|+|++++++++++.++++.++++++++++..++......+.. ........+...+..+
T Consensus 254 ~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a 330 (941)
T TIGR01517 254 VNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIA 330 (941)
T ss_pred CCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHH
Confidence 9999999999988765 568999999999999999988888888877655433221111000 0000112567788999
Q ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCC
Q 001960 405 VTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK 484 (991)
Q Consensus 405 i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~ 484 (991)
+++++++||||||+++|++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|++++..+..++.++.
T Consensus 331 l~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~- 409 (941)
T TIGR01517 331 VTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV- 409 (941)
T ss_pred HHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999876654432211
Q ss_pred CCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce
Q 001960 485 GTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 564 (991)
Q Consensus 485 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~ 564 (991)
....++...+++..++++|+......++.+..+..|||+|.|+++++.+.|.+....+..+++++.+||+|++|+
T Consensus 410 -----~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ 484 (941)
T TIGR01517 410 -----LRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKF 484 (941)
T ss_pred -----cccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCe
Confidence 111223445556666666665443322233445689999999999999888877777777888999999999999
Q ss_pred EEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCC
Q 001960 565 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 644 (991)
Q Consensus 565 msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~ 644 (991)
|+++++.+++.+++++|||||.++++|+.+++.+|...++++ .++.+.+.+++++++|+|++++|||+++.+.....+.
T Consensus 485 msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~ 563 (941)
T TIGR01517 485 MSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDY 563 (941)
T ss_pred EEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc
Confidence 999999877779999999999999999988777888888887 6788999999999999999999999986543322334
Q ss_pred CCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 645 ~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
.|++++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|++|||.+++..+++|++++.++++++++.+
T Consensus 564 ~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i 643 (941)
T TIGR01517 564 PNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPIL 643 (941)
T ss_pred cccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999877899999999999999999999
Q ss_pred cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
+++.||||++|+||.++|+.+|++ |++|+|||||+||+|||++||||||||++|+|+|+++||+++++|+|++|+++++
T Consensus 644 ~~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~ 722 (941)
T TIGR01517 644 PKLRVLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVK 722 (941)
T ss_pred ccCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHH
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCC
Q 001960 805 WGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884 (991)
Q Consensus 805 ~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~ 884 (991)
+||++|+||+|+++|++++|+..+++.+++.++.++.|++++|++|+|+++|.+|+++|++|+|++++|++||+++++++
T Consensus 723 ~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~l 802 (941)
T TIGR01517 723 WGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPL 802 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCC-----CcccchhHHHHHHHHHHHHHHHHhhccccc
Q 001960 885 ISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGP-----DPDLILNTLIFNTFVFCQLQRDGKDKRLQG 950 (991)
Q Consensus 885 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~t~~f~~~v~~q~~n~~~~r~~~~ 950 (991)
+++.||++|+.++++++++.+++++.+..+++..+. +.....+|++|++|+++|+||.+|+|+...
T Consensus 803 i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~ 873 (941)
T TIGR01517 803 ISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYE 873 (941)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCc
Confidence 999999999999999999888877766656544331 123457899999999999999999998653
No 4
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=5.2e-135 Score=1270.77 Aligned_cols=801 Identities=28% Similarity=0.406 Sum_probs=682.3
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~ 198 (991)
..++++++.|+++...||++++ +++|+++||+|+++.++.+++|+.+++||+++++++|+++++++++.+
T Consensus 10 ~~~~~v~~~l~t~~~~GLs~~e--a~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~-------- 79 (1053)
T TIGR01523 10 DIADEAAEFIGTSIPEGLTHDE--AQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH-------- 79 (1053)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh--------
Confidence 4578899999999989999987 999999999999999999999999999999999999999999999875
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEe
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 278 (991)
.|+|++.|++.+++..+++.+++|+.+++.++|.+. .+.+++|+|||++++|+++||||||||.|++||+|||||+|++
T Consensus 80 ~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~ 158 (1053)
T TIGR01523 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIE 158 (1053)
T ss_pred hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEE
Confidence 588999999999999999999999999999999875 4558999999999999999999999999999999999999999
Q ss_pred ecceEEecccCCCCCcceeccCC--------------CCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCC---
Q 001960 279 GFSVLINESSLTGESEPVNVNAL--------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD--- 341 (991)
Q Consensus 279 g~~l~VDeS~LTGES~pv~k~~~--------------~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~--- 341 (991)
+++|.||||+|||||.|+.|... .+++|+||.|.+|.++++|++||.+|++|+|.+++.+.+.
T Consensus 159 ~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~ 238 (1053)
T TIGR01523 159 TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQ 238 (1053)
T ss_pred eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccc
Confidence 98999999999999999999521 3578999999999999999999999999999998864321
Q ss_pred --------------------------------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcccc
Q 001960 342 --------------------------------DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 389 (991)
Q Consensus 342 --------------------------------~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~ 389 (991)
.+||+|+++++++.++..++++++++++++....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~-------------- 304 (1053)
T TIGR01523 239 RPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD-------------- 304 (1053)
T ss_pred cccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------------
Confidence 2499999999999998887777776665532100
Q ss_pred CCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEE
Q 001960 390 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 469 (991)
Q Consensus 390 ~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~ 469 (991)
.+...+..+++++++++|+|||+.++++++.+++||+++|++||+++++|+||++++||+|||||||+|+|+|+
T Consensus 305 ------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~ 378 (1053)
T TIGR01523 305 ------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIAR 378 (1053)
T ss_pred ------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEE
Confidence 11245667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcC-eeeeecCC--CCCCC------------------------C-------------CCCCChhHHHHHHHHHHhcC
Q 001960 470 KACICE-EIKEVDNS--KGTPA------------------------F-------------GSSIPASASKLLLQSIFNNT 509 (991)
Q Consensus 470 ~~~~~~-~~~~~~~~--~~~~~------------------------~-------------~~~~~~~~~~~l~~~i~~~~ 509 (991)
++|..+ ..+..+.. ...+. . .....++....+.....+|+
T Consensus 379 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn 458 (1053)
T TIGR01523 379 QIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALAN 458 (1053)
T ss_pred EEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhcc
Confidence 999764 22221110 00000 0 00001112233455556666
Q ss_pred CCceeec-CCCceeecCChhhHHHHHHHHHcCCChH------HH-------------------hhhcceEEEecCCCCCc
Q 001960 510 GGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE-------------------RQASKIVKVEPFNSVKK 563 (991)
Q Consensus 510 ~~~~~~~-~~~~~~~~g~p~e~All~~a~~~g~~~~------~~-------------------~~~~~il~~~pF~s~~k 563 (991)
.+.+..+ +++.+...|||+|.||+.++.+.|.+.. .. +..+++++.+||+|+||
T Consensus 459 ~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK 538 (1053)
T TIGR01523 459 IATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIK 538 (1053)
T ss_pred CCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCC
Confidence 6665432 2234456899999999999988887421 11 23468999999999999
Q ss_pred eEEEEEEeCCC-eEEEEEcCchHHHHHhccccccCCC-eeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCC--
Q 001960 564 QMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS-- 639 (991)
Q Consensus 564 ~msviv~~~~~-~~~~~~KGa~e~il~~c~~~~~~~g-~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~-- 639 (991)
||+++++.+++ .+++|+|||||.|+++|+.+...+| ...+++++.++.+.+.+++|+++|+||+++|||.++.+..
T Consensus 539 ~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~ 618 (1053)
T TIGR01523 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNND 618 (1053)
T ss_pred eEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccc
Confidence 99999987644 5889999999999999998765555 5678999999999999999999999999999999865311
Q ss_pred -------CCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----------
Q 001960 640 -------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---------- 702 (991)
Q Consensus 640 -------~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~---------- 702 (991)
...+..|+|++|+|+++++||+||+++++|+.|+++||+|+|+|||++.||.++|+++||..+
T Consensus 619 ~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~ 698 (1053)
T TIGR01523 619 DQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIM 698 (1053)
T ss_pred hhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccc
Confidence 012346889999999999999999999999999999999999999999999999999999754
Q ss_pred CceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHH
Q 001960 703 NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 703 ~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ 782 (991)
...+++|++++.++++++++...+..||||++|+||.++|+.+|++ |++|+|+|||+||+|||++||||||||++|+|+
T Consensus 699 ~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~v 777 (1053)
T TIGR01523 699 DSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDV 777 (1053)
T ss_pred cceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHH
Confidence 3479999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCChhHHHHHHHHHHHhH
Q 001960 783 AKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT---G--NAPLTAVQLLWVNMIMDT 857 (991)
Q Consensus 783 ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~---~--~~pl~~~qll~~nli~d~ 857 (991)
||++||+++++|||++|+++++|||++|+||+|+++|.+++|+..+++.+++.++. | +.||+++|+||+|+++|.
T Consensus 778 ak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~ 857 (1053)
T TIGR01523 778 AKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSC 857 (1053)
T ss_pred HHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888887774 3 379999999999999999
Q ss_pred HHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH---hcc--cccccC-----CC--Ccccc
Q 001960 858 LGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT---RGK--AVFRLD-----GP--DPDLI 925 (991)
Q Consensus 858 l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~---~~~--~~~~~~-----~~--~~~~~ 925 (991)
+|+++|++|||++++|+|||+.++++++++.+++.++.+++++++..+..++ ++. ...... +. .....
T Consensus 858 ~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 937 (1053)
T TIGR01523 858 FPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFK 937 (1053)
T ss_pred HHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhh
Confidence 9999999999999999999999999999999999898888888766554332 211 000000 00 01234
Q ss_pred hhHHHHHHHHHHHHHHHHhhcccccc
Q 001960 926 LNTLIFNTFVFCQLQRDGKDKRLQGY 951 (991)
Q Consensus 926 ~~t~~f~~~v~~q~~n~~~~r~~~~~ 951 (991)
.+|+.|.+++++|++|.+|||+.+.+
T Consensus 938 a~t~~f~~l~~~~~~~~~~~r~~~~~ 963 (1053)
T TIGR01523 938 ARSAAFATMTFCALILAVEVKDFDNS 963 (1053)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCchh
Confidence 68999999999999999999986544
No 5
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=2.6e-131 Score=1242.23 Aligned_cols=808 Identities=29% Similarity=0.406 Sum_probs=676.3
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc----
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---- 194 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~---- 194 (991)
..++++++.|+++...||++++ +++|+++||+|+++.++++++|+.++++|+++++++++++++++++.....+
T Consensus 20 ~~~~~~~~~l~t~~~~GLs~~e--~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~ 97 (997)
T TIGR01106 20 LSLDELERKYGTDLSKGLSAAR--AAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEE 97 (997)
T ss_pred CCHHHHHHHhCcCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCC
Confidence 4688999999999999999987 9999999999999998999999999999999999999999999876533221
Q ss_pred -CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeeccc
Q 001960 195 -GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (991)
Q Consensus 195 -~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (991)
.....|++++.+++.+++..+++.+.+++.++..+++.+ ..+.+++|+|||++++|+++||||||+|.|++||+||||
T Consensus 98 ~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD 176 (997)
T TIGR01106 98 EPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPAD 176 (997)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeee
Confidence 112467887755444444444444444444444455544 345689999999999999999999999999999999999
Q ss_pred EEEEeecceEEecccCCCCCcceeccCCC---------CeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCC
Q 001960 274 GLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 344 (991)
Q Consensus 274 gill~g~~l~VDeS~LTGES~pv~k~~~~---------~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t 344 (991)
|++++|+++.||||+|||||.|+.|..++ +++|+||.|.+|.+.++|++||.+|+.|++.+++.+.+.+++
T Consensus 177 ~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 256 (997)
T TIGR01106 177 LRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKT 256 (997)
T ss_pred EEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCC
Confidence 99999988999999999999999996543 479999999999999999999999999999999988888889
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 001960 345 PLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424 (991)
Q Consensus 345 ~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l 424 (991)
|+|++++++++.+..+++++++++++++... +. .+...+..++++++++||||||+++++++
T Consensus 257 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~i~v~v~~iP~~L~~~v~i~l 318 (997)
T TIGR01106 257 PIAIEIEHFIHIITGVAVFLGVSFFILSLIL--------GY----------TWLEAVIFLIGIIVANVPEGLLATVTVCL 318 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cC----------CHHHHHHHHHHHHhhcCCccchHHHHHHH
Confidence 9999999999999888877776666544211 00 24466778899999999999999999999
Q ss_pred HHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHH
Q 001960 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504 (991)
Q Consensus 425 ~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 504 (991)
+.++++|.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..+.................+.+...
T Consensus 319 ~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 398 (997)
T TIGR01106 319 TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRI 398 (997)
T ss_pred HHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998876654321100000001111233445566
Q ss_pred HHhcCCCceeecCCC----ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC---CCeEE
Q 001960 505 IFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP---EGGFR 577 (991)
Q Consensus 505 i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~---~~~~~ 577 (991)
++.|+++....+.++ +....|||+|.||++++...+.+....+..+++++.+||+|+||||+++++.. ++.++
T Consensus 399 ~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~ 478 (997)
T TIGR01106 399 AGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHL 478 (997)
T ss_pred HHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEE
Confidence 777776665433222 23457999999999999877666667778899999999999999999988643 24688
Q ss_pred EEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCC--------CCCCCCCCc
Q 001960 578 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--------DAPIPTEGY 649 (991)
Q Consensus 578 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~--------~~~~~e~~l 649 (991)
+++|||||.|+++|++++ .+|+..+++++.++.+.+.+++|+++|+||+++|||.++.+... +.+..|+|+
T Consensus 479 ~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L 557 (997)
T TIGR01106 479 LVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNL 557 (997)
T ss_pred EEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCc
Confidence 999999999999999876 57888899999999999999999999999999999998653111 112337899
Q ss_pred EEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------------------------ce
Q 001960 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------------------------GI 705 (991)
Q Consensus 650 ~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~------------------------~~ 705 (991)
+|+|+++++||+||+++++|++|+++||+++|+|||+..||.++|+++|+..++ ..
T Consensus 558 ~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 637 (997)
T TIGR01106 558 CFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKAC 637 (997)
T ss_pred EEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccce
Confidence 999999999999999999999999999999999999999999999999997542 26
Q ss_pred eeeCcccccCCHHHHhhhccccc--eEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHH
Q 001960 706 AIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA 783 (991)
Q Consensus 706 vi~g~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~a 783 (991)
+++|++++.++++++++.++++. ||||++|+||.++|+.+|++ |++|+|+|||+||+|||++||||||||++|+|+|
T Consensus 638 vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va 716 (997)
T TIGR01106 638 VVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 716 (997)
T ss_pred EEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence 99999999999999999998764 99999999999999999998 9999999999999999999999999998899999
Q ss_pred HhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHh
Q 001960 784 KESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALAL 863 (991)
Q Consensus 784 k~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal 863 (991)
|++||++++||||++|+++++|||++|.||+|+++|++++|+..+++.++++++..++||+++|+||+|+++|++|+++|
T Consensus 717 k~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al 796 (997)
T TIGR01106 717 KQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISL 796 (997)
T ss_pred HHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccccccCCCCC-CCCCcCHHHHHHHH-HHHHHHHHHHHHHHHh-----cc---ccccc---------CCC-Cc-
Q 001960 864 ATEPPNGDLMKRSPVGR-KGNFISNVMWRNIL-GQSLYQFLIIWYLQTR-----GK---AVFRL---------DGP-DP- 922 (991)
Q Consensus 864 ~~e~~~~~l~~~~P~~~-~~~~~~~~~~~~i~-~~~~~~~~~~~~l~~~-----~~---~~~~~---------~~~-~~- 922 (991)
++|||++++|+|||+.+ .++++++.+|..++ ..++++++..++.++. |. ..+++ ++. +.
T Consensus 797 ~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (997)
T TIGR01106 797 AYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSY 876 (997)
T ss_pred hcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccccccccc
Confidence 99999999999999974 67999998876543 3466665554443321 11 11221 000 00
Q ss_pred ------------ccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 923 ------------DLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 923 ------------~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
....+|++|++|++||+||.+|||+..
T Consensus 877 ~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~ 915 (997)
T TIGR01106 877 GQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRR 915 (997)
T ss_pred ccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCc
Confidence 014689999999999999999999854
No 6
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-132 Score=1237.94 Aligned_cols=789 Identities=37% Similarity=0.539 Sum_probs=692.1
Q ss_pred HHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcch
Q 001960 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHD 202 (991)
Q Consensus 123 ~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d 202 (991)
.+...+.++...||+.++ +.+|+..||.|+++..+..++|+.++.+|+++++++|+++++++..++....+. .+
T Consensus 32 ~~~~~~~~~~~~GLs~~e--~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 32 ELLLELFTSPTTGLSEEE--VKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred hHHHhhcCCcccCCCHHH--HHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 566778889999999966 999999999999999999999999999999999999999999999987542110 34
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecce
Q 001960 203 GLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 282 (991)
Q Consensus 203 ~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l 282 (991)
...|...+++..++...++|+.++..+++.+.. +.+++|+|||++++|+++||||||||.|++||+||||++|++++++
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDL 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCc
Confidence 455666677777788888999888888888754 6689999999999999999999999999999999999999999988
Q ss_pred EEecccCCCCCcceecc-------------CCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHH
Q 001960 283 LINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVK 349 (991)
Q Consensus 283 ~VDeS~LTGES~pv~k~-------------~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~ 349 (991)
+||||+|||||.|+.|. ..++++|+||.|.+|.+.++|++||.+|+.|++...+.......||+|++
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~ 264 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRK 264 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHH
Confidence 99999999999999995 34688999999999999999999999999999999999886677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Q 001960 350 LNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK 429 (991)
Q Consensus 350 l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~ 429 (991)
++++...+..++++++++++++.. +.. + . .+...+..++++++.++|+|||+.++++++.++.
T Consensus 265 l~~~~~~l~~~~l~~~~~~~~~~~---~~~----~-------~---~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~ 327 (917)
T COG0474 265 LNKLGKFLLVLALVLGALVFVVGL---FRG----G-------N---GLLESFLTALALAVAAVPEGLPAVVTIALALGAQ 327 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---Hhc----C-------c---cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 999999999888888777776642 110 0 0 1567899999999999999999999999999999
Q ss_pred HHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcC
Q 001960 430 KMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNT 509 (991)
Q Consensus 430 ~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 509 (991)
+|.+++++||+++++|+||++++||||||||||+|+|+|++++..+...+.+ ..... ..+....+...+++||
T Consensus 328 ~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~------~~~~~-~~~~~~~~l~~~~lc~ 400 (917)
T COG0474 328 RMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID------DKDLK-DSPALLRFLLAAALCN 400 (917)
T ss_pred HHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc------ccccc-cchHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999985110000 00011 1122223445666777
Q ss_pred CCceeecCCCceeecCChhhHHHHHHHHHcCC--ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHH
Q 001960 510 GGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEII 587 (991)
Q Consensus 510 ~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~--~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~i 587 (991)
+.....+ + ++..|||+|.||++++.+.|. +....+..+++++.+||+|+|||||++++.+++++.+++|||||.|
T Consensus 401 ~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~i 477 (917)
T COG0474 401 SVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVI 477 (917)
T ss_pred ccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHH
Confidence 7666544 3 677999999999999999998 7777788889999999999999999999977777999999999999
Q ss_pred HHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCC-CCCCCCcEEEEEeeccCCCcccHH
Q 001960 588 LAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVK 666 (991)
Q Consensus 588 l~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~-~~~e~~l~~lG~~~i~D~lr~~v~ 666 (991)
+++|+++ +...+++++.++.+++..++|+++|||++++|||.++..+.... +..|+|++|+|+++|+||||++++
T Consensus 478 l~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~ 553 (917)
T COG0474 478 LERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVK 553 (917)
T ss_pred HHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHH
Confidence 9999976 67778999999999999999999999999999997766533221 568899999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~ 744 (991)
++|+.|++|||++||+||||+.||.+||++||+..+. ..+++|.+++.++++++.+.+.++.||||++|+||.++|+.
T Consensus 554 ~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~ 633 (917)
T COG0474 554 EAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEA 633 (917)
T ss_pred HHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999998876 45999999999999999999999999999999999999999
Q ss_pred HHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824 (991)
Q Consensus 745 l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n 824 (991)
+|++ |++|+|||||+||+||||+||||||||++|+|+||++||+++.+|+|..++.+++|||++|.|++|+++|.+++|
T Consensus 634 lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n 712 (917)
T COG0474 634 LQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN 712 (917)
T ss_pred HHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-CChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHH
Q 001960 825 VVALIVNFSSACLTGN-APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLI 903 (991)
Q Consensus 825 ~~~i~~~~~~~~~~~~-~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~ 903 (991)
+..+++.+++.+++.+ .||+++|+||+|+++|.+|+++|+.++|+.+.|++||++++++++++..+..++.+..++.++
T Consensus 713 ~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i 792 (917)
T COG0474 713 VGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAI 792 (917)
T ss_pred HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHH
Confidence 9999999988888776 899999999999999999999999999999999999999999999999888877777777777
Q ss_pred HHHHHHhcccccccC---CCCc-ccchhHHHHHHHHHHHHHHHHhhccccc
Q 001960 904 IWYLQTRGKAVFRLD---GPDP-DLILNTLIFNTFVFCQLQRDGKDKRLQG 950 (991)
Q Consensus 904 ~~~l~~~~~~~~~~~---~~~~-~~~~~t~~f~~~v~~q~~n~~~~r~~~~ 950 (991)
++++.|....+.... +... .....|+.|++++++|+++.+++|....
T Consensus 793 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~ 843 (917)
T COG0474 793 LFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGR 843 (917)
T ss_pred HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 665554433322211 1111 4457899999999999999999998743
No 7
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=7.4e-131 Score=1228.42 Aligned_cols=779 Identities=32% Similarity=0.516 Sum_probs=681.3
Q ss_pred CCHHHHHHHhCCCcCCCCC-hhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHH-hhHHHHHHHHHHHHHHHhhhcccCC
Q 001960 119 GGVEGIAEKLSTSITDGIS-TSEHLLNRRKEIYGINKFTESPARGFWVYVWEAL-HDMTLMILAVCALVSLVVGIATEGW 196 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~-~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~-~~~~~~illi~ai~s~~~~~~~~~~ 196 (991)
..++++++.|+++...||+ +++ +++|+++||+|+++.++.+++|+.++++| +++++++++++++++++++
T Consensus 7 ~~~~~v~~~l~t~~~~GLs~~~e--v~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g------ 78 (884)
T TIGR01522 7 LSVEETCSKLQTDLQNGLNSSQE--ASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG------ 78 (884)
T ss_pred CCHHHHHHHhCcCcccCCCcHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc------
Confidence 3688999999999999999 655 99999999999999998999999999999 9999999999999999876
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEE
Q 001960 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (991)
Q Consensus 197 ~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 276 (991)
.|.|++.|++.++++++++.+.+|+.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++
T Consensus 79 --~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 79 --NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred --chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 578888888888888899999999999999888874 45689999999999999999999999999999999999999
Q ss_pred EeecceEEecccCCCCCcceeccCC-------------CCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCC
Q 001960 277 VSGFSVLINESSLTGESEPVNVNAL-------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDE 343 (991)
Q Consensus 277 l~g~~l~VDeS~LTGES~pv~k~~~-------------~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~ 343 (991)
++|+++.||||+|||||.|+.|.++ ++++|+||.|.+|+++++|++||.+|++|+|.+++.+.+..+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 9998789999999999999999754 258999999999999999999999999999999999888888
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Q 001960 344 TPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLS 423 (991)
Q Consensus 344 t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~ 423 (991)
+|+|+.+++++.+++.++++++++++++. ++. +. .+...+..++++++++||||||+++|++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~~----------~~~~~~~~~v~llv~aiP~~Lp~~vt~~ 297 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----GK----------DWLEMFTISVSLAVAAIPEGLPIIVTVT 297 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----cC----------CHHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 99999999999998877665544433332 111 00 2457788899999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeee-ecCCCCC---------CCCCCCC
Q 001960 424 LAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-VDNSKGT---------PAFGSSI 493 (991)
Q Consensus 424 l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~-~~~~~~~---------~~~~~~~ 493 (991)
++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+. .+..... .......
T Consensus 298 l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (884)
T TIGR01522 298 LALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFY 377 (884)
T ss_pred HHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999987654321 1000000 0000011
Q ss_pred ChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeC-
Q 001960 494 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 572 (991)
Q Consensus 494 ~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~- 572 (991)
++...++ +...+.|+++..... + .+..|||+|.|+++++.+.|.+ ..+..++.++.+||+|+||||+++++.+
T Consensus 378 ~~~~~~~-l~~~~l~~~~~~~~~-~--~~~~g~p~e~All~~~~~~~~~--~~~~~~~~~~~~pF~s~~k~m~v~~~~~~ 451 (884)
T TIGR01522 378 TVAVSRI-LEAGNLCNNAKFRNE-A--DTLLGNPTDVALIELLMKFGLD--DLRETYIRVAEVPFSSERKWMAVKCVHRQ 451 (884)
T ss_pred CHHHHHH-HHHHhhhCCCeecCC-C--CCcCCChHHHHHHHHHHHcCcH--hHHhhCcEEeEeCCCCCCCeEEEEEEEcC
Confidence 1222333 344445555544322 1 1346899999999999887753 3445678899999999999999998763
Q ss_pred CCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEE
Q 001960 573 EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 652 (991)
Q Consensus 573 ~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~l 652 (991)
++++++++|||||.|+.+|++++..+|...+++++.++.+.+.+++++++|+|++++||+++ +++++|+
T Consensus 452 ~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~-----------~~~l~~l 520 (884)
T TIGR01522 452 DRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE-----------KGQLTFL 520 (884)
T ss_pred CCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC-----------CCCeEEE
Confidence 56788999999999999999998878888899999899999999999999999999999864 3579999
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEec
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 732 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar 732 (991)
|+++++||+|||++++|++|+++|++++|+|||+..||.++|+++||......+++|++++.++++++++.+++..||||
T Consensus 521 Gli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFAR 600 (884)
T ss_pred EEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEE
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred cChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHH
Q 001960 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 812 (991)
Q Consensus 733 ~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~ 812 (991)
++|+||..+|+.+|++ |++|+|+|||.||+|||++||||||||.+|+++++++||+++++|||+.+++++++||++|+|
T Consensus 601 ~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~n 679 (884)
T TIGR01522 601 ASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNN 679 (884)
T ss_pred CCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHH
Q 001960 813 IQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 892 (991)
Q Consensus 813 i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~ 892 (991)
|+|+++|+++.|+..+++.+++.++..+.||+++|+||+|+++|.+|+++|++|||++++|+|||++++++++++.||+.
T Consensus 680 i~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~ 759 (884)
T TIGR01522 680 IKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKK 759 (884)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHH
Confidence 99999999999999999888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 893 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 893 i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
++.++++++++.+++++.. +.. + ......+|++|++|++||+||.+|||+..
T Consensus 760 ~~~~g~~~~~~~~~~~~~~--~~~--~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~~ 811 (884)
T TIGR01522 760 ILVSAIIIVVGTLFVFVRE--MQD--G-VITARDTTMTFTCFVFFDMFNALACRSQT 811 (884)
T ss_pred HHHHHHHHHHHHHHHHHHH--HcC--C-cchhhHHHHHHHHHHHHHHHHHHHHccCC
Confidence 9999999987766554421 111 1 11235689999999999999999999853
No 8
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=4.8e-127 Score=1187.03 Aligned_cols=766 Identities=25% Similarity=0.378 Sum_probs=652.0
Q ss_pred CHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhccc---CC
Q 001960 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATE---GW 196 (991)
Q Consensus 120 ~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~---~~ 196 (991)
..+.+.+.|+++. .||++++ +++|+++||+|+++.++.+++|+.++++|+++++++|+++++++++.+.+.. +.
T Consensus 31 ~~~~v~~~l~~~~-~GLs~~e--a~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~ 107 (903)
T PRK15122 31 SLEETLANLNTHR-QGLTEED--AAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGE 107 (903)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCc
Confidence 5677888899984 7999987 9999999999999999999999999999999999999999999999875421 22
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCC------eEEEeecCCcccCcEEEeCCCCee
Q 001960 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG------FRRKISIYDLLPGDIVHLCMGDQV 270 (991)
Q Consensus 197 ~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G------~~~~I~~~dLvvGDIV~l~~Gd~V 270 (991)
...|.+++.|++.+++..++..+.+++.+++.++|.+.. +.+++|+||| ++++|+++||||||+|.|++||+|
T Consensus 108 ~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~I 186 (903)
T PRK15122 108 ETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMI 186 (903)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEE
Confidence 246899998888888888889999999999999988754 4589999994 799999999999999999999999
Q ss_pred cccEEEEeecceEEecccCCCCCcceeccC----------------------CCCeEEeccEEecCeEEEEEEEEeccch
Q 001960 271 PADGLFVSGFSVLINESSLTGESEPVNVNA----------------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQ 328 (991)
Q Consensus 271 PaDgill~g~~l~VDeS~LTGES~pv~k~~----------------------~~~~l~sGt~v~~g~~~~~V~~~G~~T~ 328 (991)
||||++++|+++.||||+|||||.|+.|.. .++.+|+||.|.+|+++++|++||.+|+
T Consensus 187 PaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~ 266 (903)
T PRK15122 187 PADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266 (903)
T ss_pred eeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccH
Confidence 999999999889999999999999999964 1267999999999999999999999999
Q ss_pred hhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHH
Q 001960 329 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 408 (991)
Q Consensus 329 ~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~il 408 (991)
+|+|.+++.+ ...++|+|+++++++..+..+++.++.+++++.. +. .+ .+.+.+..+++++
T Consensus 267 ~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~---~~----~~-----------~~~~~l~~aisl~ 327 (903)
T PRK15122 267 FGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLING---FT----KG-----------DWLEALLFALAVA 327 (903)
T ss_pred hhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hc----cC-----------CHHHHHHHHHHHH
Confidence 9999999887 5566999999999999887776655544433211 11 00 2456788899999
Q ss_pred HHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCC
Q 001960 409 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 488 (991)
Q Consensus 409 v~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~ 488 (991)
+++||||||++++++++.++.+|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 328 V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~----------- 396 (903)
T PRK15122 328 VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR----------- 396 (903)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-----------
Confidence 999999999999999999999999999999999999999999999999999999999999987632210
Q ss_pred CCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEE
Q 001960 489 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVV 568 (991)
Q Consensus 489 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msvi 568 (991)
..++.++ .+ +.|+.. + ...+||+|.|+++++.+.+.+ ..+..++.++.+||+|.+|+|+++
T Consensus 397 ----~~~~~l~---~a-~l~s~~-----~----~~~~~p~e~All~~a~~~~~~--~~~~~~~~~~~~pF~s~~k~ms~v 457 (903)
T PRK15122 397 ----KDERVLQ---LA-WLNSFH-----Q----SGMKNLMDQAVVAFAEGNPEI--VKPAGYRKVDELPFDFVRRRLSVV 457 (903)
T ss_pred ----ChHHHHH---HH-HHhCCC-----C----CCCCChHHHHHHHHHHHcCch--hhhhcCceEEEeeeCCCcCEEEEE
Confidence 0112222 22 222210 0 126899999999999876643 223467788999999999999999
Q ss_pred EEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCC--CCCCCC
Q 001960 569 IELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA--DAPIPT 646 (991)
Q Consensus 569 v~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~--~~~~~e 646 (991)
++..++++++++|||||.++++|+++. .+|...+++++.++++.+.+++++++|+|++++|||+++.++.. ..+..|
T Consensus 458 ~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e 536 (903)
T PRK15122 458 VEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADE 536 (903)
T ss_pred EEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccc
Confidence 987677788999999999999999765 46777889999999999999999999999999999988654211 112357
Q ss_pred CCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccc
Q 001960 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 726 (991)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~ 726 (991)
+|++|+|+++++||+||+++++|++|+++||+++|+||||+.||.++|+++||.. +.+++|++++.++++++.+.+++
T Consensus 537 ~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~ 614 (903)
T PRK15122 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEE 614 (903)
T ss_pred cCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhh
Confidence 7999999999999999999999999999999999999999999999999999953 46899999999999999999999
Q ss_pred cceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 001960 727 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (991)
Q Consensus 727 ~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~g 806 (991)
+.||||++|+||.++|+.||++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|++||||++|++++++|
T Consensus 615 ~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~~g 692 (903)
T PRK15122 615 RTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIKG 692 (903)
T ss_pred CCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcC
Q 001960 807 RSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFIS 886 (991)
Q Consensus 807 R~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~ 886 (991)
|++|+||+|+++|+++.|+..++..+++.++..+.|++++|+||+|+++|+ |+++|++|||++++| |||+++++++++
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~ 770 (903)
T PRK15122 693 RETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIG 770 (903)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhH
Confidence 999999999999999999998887777777766789999999999999995 999999999999999 999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 887 NVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 887 ~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
+.|+...+..+++.+.. |++.++ .+...........+|..|.+++++|+||.+|+|+.+
T Consensus 771 ~~~~~~g~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~ 829 (903)
T PRK15122 771 RFMLWIGPTSSIFDITT-FALMWF---VFAANSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK 829 (903)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHH---HhccCcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC
Confidence 98876333333333222 222221 111111010113568889999999999999999865
No 9
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=3.9e-126 Score=1176.71 Aligned_cols=759 Identities=23% Similarity=0.353 Sum_probs=640.9
Q ss_pred CHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCC
Q 001960 120 GVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKG 199 (991)
Q Consensus 120 ~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~ 199 (991)
..+.+.+.|+++. .||++++ +++|+++||+|+++.++++++|+.++++|+++++++++++++++++.+ .
T Consensus 53 ~~~~v~~~l~~~~-~GLs~~e--a~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~--------~ 121 (902)
T PRK10517 53 PEEELWKTFDTHP-EGLNEAE--VESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE--------D 121 (902)
T ss_pred CHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------c
Confidence 5788888999987 6999887 999999999999999999999999999999999999999999998875 5
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeC------CeEEEeecCCcccCcEEEeCCCCeeccc
Q 001960 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFRRKISIYDLLPGDIVHLCMGDQVPAD 273 (991)
Q Consensus 200 ~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~------G~~~~I~~~dLvvGDIV~l~~Gd~VPaD 273 (991)
|++++.|++.+++..+++.+.+++.++..++|.+.. +.+++|+|| |++++|+++||||||+|.|++||+||||
T Consensus 122 ~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~-~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 122 LFAAGVIALMVAISTLLNFIQEARSTKAADALKAMV-SNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 788888887778888888888888888888888754 458999999 7899999999999999999999999999
Q ss_pred EEEEeecceEEecccCCCCCcceeccCCC------------CeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCC
Q 001960 274 GLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD 341 (991)
Q Consensus 274 gill~g~~l~VDeS~LTGES~pv~k~~~~------------~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~ 341 (991)
|++++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|+++++|++||.+|++|+|.+.+.+...
T Consensus 201 g~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~ 280 (902)
T PRK10517 201 LRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDS 280 (902)
T ss_pred EEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCC
Confidence 99999988999999999999999997542 479999999999999999999999999999999998888
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHH
Q 001960 342 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVT 421 (991)
Q Consensus 342 ~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~ 421 (991)
+++|+|+.++++++++..++++++.++++++.. . .+ .+...+..++++++++||||||++++
T Consensus 281 ~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---~----~~-----------~~~~~l~~alsv~V~~~Pe~LP~~vt 342 (902)
T PRK10517 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---T----KG-----------DWWEAALFALSVAVGLTPEMLPMIVT 342 (902)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---h----cC-----------CHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 889999999999999888777766665544211 1 00 24567888999999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHH
Q 001960 422 LSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLL 501 (991)
Q Consensus 422 ~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 501 (991)
++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++... . .+ ..+++
T Consensus 343 ~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~------~----------~~--~~~ll 404 (902)
T PRK10517 343 STLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS------G----------KT--SERVL 404 (902)
T ss_pred HHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC------C----------CC--HHHHH
Confidence 999999999999999999999999999999999999999999999998763110 0 00 11222
Q ss_pred HHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEc
Q 001960 502 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCK 581 (991)
Q Consensus 502 ~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~K 581 (991)
...+.|+.. . ...+||+|.|+++++...+ .......++.++.+||+|++|+|+++++.+++.+.+++|
T Consensus 405 -~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~K 472 (902)
T PRK10517 405 -HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICK 472 (902)
T ss_pred -HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEe
Confidence 222333221 1 1168999999999986543 122345677889999999999999999877777889999
Q ss_pred CchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCC
Q 001960 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 661 (991)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~l 661 (991)
||||.++++|+++. .+|...+++++.++.+.+..++++++|+|++++|||+++.+........|+|++|+|+++++||+
T Consensus 473 Ga~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~ 551 (902)
T PRK10517 473 GALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPP 551 (902)
T ss_pred CchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcc
Confidence 99999999999875 45667889999888999999999999999999999988654322112236899999999999999
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHH
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 741 (991)
||+++++|++|+++||+|+|+||||+.||.++|+++||. ++.+++|++++.++++++++.++++.||||++|+||.++
T Consensus 552 R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~I 629 (902)
T PRK10517 552 KETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERI 629 (902)
T ss_pred hhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHH
Confidence 999999999999999999999999999999999999995 347999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (991)
Q Consensus 742 v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l 821 (991)
|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|+++|||..|++++++||++|+||+|+++|.+
T Consensus 630 V~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~l 707 (902)
T PRK10517 630 VTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTA 707 (902)
T ss_pred HHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHH
Q 001960 822 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQF 901 (991)
Q Consensus 822 ~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~ 901 (991)
+.|+..++..+++.++..+.||++.|+||+|+++| +|+++|++|||++++|++||+. +...+.+.| +..+++.+
T Consensus 708 s~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r~-~~~~~~~~~----~~~g~~~~ 781 (902)
T PRK10517 708 SSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQRW-NPADLGRFM----VFFGPISS 781 (902)
T ss_pred HhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCCC-CHHHHHHHH----HHHHHHHH
Confidence 99999988888877776568999999999999999 7899999999999999999972 222333333 33333333
Q ss_pred HHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 902 LIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 902 ~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
++.+..++.....++..........+|..|.+++++|+||.+|+|+..
T Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~ 829 (902)
T PRK10517 782 IFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR 829 (902)
T ss_pred HHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 222221111111122111100012455669999999999999999865
No 10
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=7.7e-126 Score=1185.56 Aligned_cols=772 Identities=32% Similarity=0.454 Sum_probs=657.8
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhhhcccCC--CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEe
Q 001960 167 VWEALHDMTLMILAVCALVSLVVGIATEGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR 244 (991)
Q Consensus 167 ~~~~~~~~~~~illi~ai~s~~~~~~~~~~--~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R 244 (991)
+++||+++++++|++++++|++++...++. ...|++++.|++.+++...++.+.+++.++..++|.+ ..+.+++|+|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViR 79 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLR 79 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEE
Confidence 478999999999999999999998765333 2579999999999999999999999999999999887 4566899999
Q ss_pred CCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCC------------CCeEEeccEEe
Q 001960 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQ 312 (991)
Q Consensus 245 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~------------~~~l~sGt~v~ 312 (991)
||++++|+++||||||+|.|++||+|||||++++|++|.||||+|||||.|+.|.++ ++++|+||.+.
T Consensus 80 dg~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~ 159 (917)
T TIGR01116 80 DGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVV 159 (917)
T ss_pred CCEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEe
Confidence 999999999999999999999999999999999998899999999999999999643 27899999999
Q ss_pred cCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCc
Q 001960 313 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD 392 (991)
Q Consensus 313 ~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (991)
+|+++++|++||.+|+.|+|.+++.+++.++||+|+++++++..+..+.+++++++++++...+... ..+ ..
T Consensus 160 ~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~--~~~------~~ 231 (917)
T TIGR01116 160 AGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDP--ALG------GG 231 (917)
T ss_pred cceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--ccc------ch
Confidence 9999999999999999999999999888889999999999999998887777766665543221100 000 01
Q ss_pred ChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEE
Q 001960 393 DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 472 (991)
Q Consensus 393 ~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~ 472 (991)
....+...+..++++++++|||+||+++++++++++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++
T Consensus 232 ~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~ 311 (917)
T TIGR01116 232 WIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVV 311 (917)
T ss_pred hHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEE
Confidence 11245566778899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EcCee------eeecCCCCCCCC---C-----CCCChhHHHHHHHHHHhcCCCceeecCC-CceeecCChhhHHHHHHHH
Q 001960 473 ICEEI------KEVDNSKGTPAF---G-----SSIPASASKLLLQSIFNNTGGEVVIGEG-NKTEILGTPTETAILEFGL 537 (991)
Q Consensus 473 ~~~~~------~~~~~~~~~~~~---~-----~~~~~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~~g~p~e~All~~a~ 537 (991)
..+.. +...+....+.. . ........+.+....+.|+++....+++ +.....|||+|.||++++.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~ 391 (917)
T TIGR01116 312 ALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVE 391 (917)
T ss_pred ecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHH
Confidence 86532 111111000000 0 0001223444556677787776654322 2334579999999999999
Q ss_pred HcCCChHH----------------HhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCee
Q 001960 538 LLGGDFQA----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 601 (991)
Q Consensus 538 ~~g~~~~~----------------~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~ 601 (991)
+.|.+... .++.+++++.+||+|+||||+++++.+ +++.+|+|||||.|+++|++++..+|..
T Consensus 392 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~ 470 (917)
T TIGR01116 392 KMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRA 470 (917)
T ss_pred HcCCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCe
Confidence 88876542 245677999999999999999999864 6688999999999999999988877888
Q ss_pred ecCCHHHHHHHHHHHHHHHH-cccceeeeeEEecCCCCC-------CCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHH
Q 001960 602 VPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICR 673 (991)
Q Consensus 602 ~~l~~~~~~~~~~~~~~~a~-~glR~l~~A~~~l~~~~~-------~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~ 673 (991)
.|++++.++++.+.+++|++ +|+||+++|||.++.+.. ...+.+|+|++|+|+++++||+|++++++|++|+
T Consensus 471 ~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~ 550 (917)
T TIGR01116 471 VPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCR 550 (917)
T ss_pred eeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHH
Confidence 99999999999999999999 999999999999865311 1123568899999999999999999999999999
Q ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhc
Q 001960 674 SAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (991)
Q Consensus 674 ~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~ 749 (991)
++||+++|+|||+..||.++|+++|+..++. .+++|++++.++++++.+..++..||||++|+||.++|+.+|+.
T Consensus 551 ~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~- 629 (917)
T TIGR01116 551 TAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ- 629 (917)
T ss_pred HCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-
Confidence 9999999999999999999999999986543 57899999999999999999999999999999999999999988
Q ss_pred CCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (991)
Q Consensus 750 g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~ 829 (991)
|++|+|+|||.||+|||++|||||||| +|++++|++||+++.+|||.+|+++++|||++|.|++|+++|.+++|+..++
T Consensus 630 g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 630 GEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred CCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT 909 (991)
Q Consensus 830 ~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 909 (991)
+.+++.++..+.||+++|++|+|+++|.+|+++|+++||++++|++||+.++++++++.+|+.|+.++++|+++.+..++
T Consensus 709 ~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 788 (917)
T TIGR01116 709 CIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFV 788 (917)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888778999999999999999999999999999999999999999999999999999999999999977444332
Q ss_pred hccc---ccc--------cC---CC-----CcccchhHHHHHHHHHHHHHHHHhhccccc
Q 001960 910 RGKA---VFR--------LD---GP-----DPDLILNTLIFNTFVFCQLQRDGKDKRLQG 950 (991)
Q Consensus 910 ~~~~---~~~--------~~---~~-----~~~~~~~t~~f~~~v~~q~~n~~~~r~~~~ 950 (991)
+... +.+ .+ +. +.....+|++|++|++||+||.+|||+.+.
T Consensus 789 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~ 848 (917)
T TIGR01116 789 WWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQ 848 (917)
T ss_pred HHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 2111 111 01 00 012456899999999999999999998643
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=8.2e-125 Score=1166.53 Aligned_cols=759 Identities=25% Similarity=0.341 Sum_probs=643.5
Q ss_pred CCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 001960 119 GGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPK 198 (991)
Q Consensus 119 ~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~ 198 (991)
.+++++.+.|+++. .||++++ +++|+++||+|+++.++.+++|+.++++|+++++++++++++++++.+
T Consensus 18 ~~~~~~~~~l~~~~-~GLs~~e--v~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~-------- 86 (867)
T TIGR01524 18 MGKETLLRKLGVHE-TGLTNVE--VTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD-------- 86 (867)
T ss_pred CCHHHHHHHhCCCC-CCCCHHH--HHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh--------
Confidence 36888999999986 6999987 999999999999999888999999999999999999999999998774
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEe------CCeEEEeecCCcccCcEEEeCCCCeecc
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFRRKISIYDLLPGDIVHLCMGDQVPA 272 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R------~G~~~~I~~~dLvvGDIV~l~~Gd~VPa 272 (991)
.|++++.|++.+++..+++.+.+++.+++.++|.+.. +.+++|+| ||++++|+++||||||+|.|++||+|||
T Consensus 87 ~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~-~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 87 DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMV-KNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhc-cCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 5788888888888888888888888888888887754 45899999 9999999999999999999999999999
Q ss_pred cEEEEeecceEEecccCCCCCcceeccCCC------------CeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCC
Q 001960 273 DGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (991)
Q Consensus 273 Dgill~g~~l~VDeS~LTGES~pv~k~~~~------------~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (991)
||++++|+++.||||+|||||.|+.|..++ +.+|+||.|.+|.++++|++||.+|++|||.+++.+ .
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~-~ 244 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATE-R 244 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhC-C
Confidence 999999988999999999999999997543 479999999999999999999999999999999988 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHH
Q 001960 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (991)
Q Consensus 341 ~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav 420 (991)
.+++|+|++++++++++..+++++++++++++.. . .+ .+...+..++++++++||||||+++
T Consensus 245 ~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~~~~~~~~al~l~v~~iP~~Lp~~v 306 (867)
T TIGR01524 245 RGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------DWLEAFLFALAVAVGLTPEMLPMIV 306 (867)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------CHHHHHHHHHHHHHHhCcchHHHHH
Confidence 6679999999999999988887777666554321 0 00 2456788899999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 001960 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (991)
Q Consensus 421 ~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (991)
+++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..... ...++
T Consensus 307 t~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~------------------~~~~~ 368 (867)
T TIGR01524 307 SSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE------------------TSERV 368 (867)
T ss_pred HHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC------------------CHHHH
Confidence 999999999999999999999999999999999999999999999999986421110 01122
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEE
Q 001960 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 580 (991)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~ 580 (991)
+ ...+.|+.. . ...+||+|.|+++++.... ....+..++.++.+||+|++|+|+++++.+++.+++++
T Consensus 369 l-~~a~l~~~~--~-------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~ 436 (867)
T TIGR01524 369 L-KMAWLNSYF--Q-------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLIC 436 (867)
T ss_pred H-HHHHHhCCC--C-------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEE
Confidence 2 222223221 1 1257999999999986532 22334567888999999999999999887666688999
Q ss_pred cCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCC
Q 001960 581 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 660 (991)
Q Consensus 581 KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~ 660 (991)
||+||.++++|+++. .+|...+++++.++.+.+.+++++++|+|++++|||+++.+.....+..|++++++|+++++||
T Consensus 437 KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp 515 (867)
T TIGR01524 437 KGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDP 515 (867)
T ss_pred eCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCC
Confidence 999999999999764 4677778999888899999999999999999999998865432111223678999999999999
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHH
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 740 (991)
+||+++++|++|+++||+++|+|||++.||.++|+++||.. +.+++|.+++.++++++.+.++++.||||++|+||.+
T Consensus 516 ~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~ 593 (867)
T TIGR01524 516 PKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSR 593 (867)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHH
Confidence 99999999999999999999999999999999999999964 3689999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 741 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 820 (991)
Q Consensus 741 ~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~ 820 (991)
+|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|+++|||+.|++++++||++|+||+|+++|+
T Consensus 594 iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ 671 (867)
T TIGR01524 594 IIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMT 671 (867)
T ss_pred HHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHH
Q 001960 821 LTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQ 900 (991)
Q Consensus 821 l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~ 900 (991)
++.|+..++..+++.++..+.||++.|+||+|+++| +|+++|++|||++++|++||+ ++++.+.+. ++..+++.
T Consensus 672 ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~~~----~~~~g~~~ 745 (867)
T TIGR01524 672 ASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMGRF----MLCIGPVS 745 (867)
T ss_pred HhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHHHH----HHHHHHHH
Confidence 999999888888777776668999999999999999 799999999999999987776 656544333 33344443
Q ss_pred HHHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 901 FLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 901 ~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
+++.+..++.....+...+.......+|..|.+++++|++|.+|+|+..
T Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~ 794 (867)
T TIGR01524 746 SIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEK 794 (867)
T ss_pred HHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCC
Confidence 3322221111111111111111123478899999999999999999865
No 12
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=9.4e-117 Score=1081.59 Aligned_cols=721 Identities=24% Similarity=0.354 Sum_probs=609.1
Q ss_pred CCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHH
Q 001960 135 GISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV 214 (991)
Q Consensus 135 Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi 214 (991)
||++++ +++|+++||+|+++. +.+++|+.++++|+++++++++++++++++++ .|++++.+++.+++..
T Consensus 1 GLs~~e--a~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~ 69 (755)
T TIGR01647 1 GLTSAE--AKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNA 69 (755)
T ss_pred CcCHHH--HHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHH
Confidence 788877 999999999999987 45567899999999999999999999999876 4788888877777778
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCc
Q 001960 215 FVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 294 (991)
Q Consensus 215 ~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~ 294 (991)
.++.+.+++.++..++|.+. .+.+++|+|||++++|+++||||||+|.|++||+|||||++++|+++.||||+|||||.
T Consensus 70 ~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 70 TIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCcc
Confidence 88888888888888888764 45689999999999999999999999999999999999999999878999999999999
Q ss_pred ceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 295 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQ 374 (991)
Q Consensus 295 pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~ 374 (991)
|+.|..++ .+|+||.|.+|+++++|++||.+|++|+|.+++.+++.+++|+|+.+++++.++.++.+++++++++++..
T Consensus 149 PV~K~~~~-~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~ 227 (755)
T TIGR01647 149 PVTKKTGD-IAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF 227 (755)
T ss_pred ceEeccCC-eeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998655 69999999999999999999999999999999998888889999999999999988877777666655432
Q ss_pred HHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEE
Q 001960 375 GLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSIC 454 (991)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~ 454 (991)
. . + . .+...+..++++++++|||+||+++|++++.++++|.|+|++||+++++|+||++|+||
T Consensus 228 ~--~-----~-------~---~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~ 290 (755)
T TIGR01647 228 G--R-----G-------E---SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILC 290 (755)
T ss_pred H--c-----C-------C---CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEE
Confidence 0 0 0 0 25567888999999999999999999999999999999999999999999999999999
Q ss_pred eCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHH
Q 001960 455 SDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 534 (991)
Q Consensus 455 ~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~ 534 (991)
||||||||+|+|+|.+++..+..+ ++ .+++..+. .|+. ..++||+|.|+++
T Consensus 291 ~DKTGTLT~~~~~v~~~~~~~~~~---------------~~--~~~l~~a~-~~~~-----------~~~~~pi~~Ai~~ 341 (755)
T TIGR01647 291 SDKTGTLTLNKLSIDEILPFFNGF---------------DK--DDVLLYAA-LASR-----------EEDQDAIDTAVLG 341 (755)
T ss_pred ecCCCccccCceEEEEEEecCCCC---------------CH--HHHHHHHH-HhCC-----------CCCCChHHHHHHH
Confidence 999999999999999987643210 11 12222222 2221 1267999999999
Q ss_pred HHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC-CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHH
Q 001960 535 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLN 613 (991)
Q Consensus 535 ~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~ 613 (991)
++.+.+ ..+..+++++.+||++.+|+|+++++.++ ++.+.++||+||.+++.|+.. ++.++++.
T Consensus 342 ~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~ 406 (755)
T TIGR01647 342 SAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVE 406 (755)
T ss_pred HHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHH
Confidence 886543 23456788899999999999999988654 667788999999999999742 23456688
Q ss_pred HHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Q 001960 614 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAI 693 (991)
Q Consensus 614 ~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~i 693 (991)
+.+++++++|+|++++|||+ .|++++++|+++++||+|||++++|++|+++||+++|+|||++.||.++
T Consensus 407 ~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I 475 (755)
T TIGR01647 407 EKVDELASRGYRALGVARTD-----------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKET 475 (755)
T ss_pred HHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 88999999999999999972 1468999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccC---CceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCC
Q 001960 694 ARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 694 a~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Ad 770 (991)
|+++||... ...+.+|.+.+.++++++.+.+.++.+|||++|+||.++|+.+|++ |++|+|+|||+||+|||++||
T Consensus 476 A~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~Ad 554 (755)
T TIGR01647 476 ARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKAD 554 (755)
T ss_pred HHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCC
Confidence 999999652 1234456666788899999999999999999999999999999999 999999999999999999999
Q ss_pred eeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHH
Q 001960 771 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLW 850 (991)
Q Consensus 771 vgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~ 850 (991)
|||||| +|+|+||++||+++++|||.+|++++++||++|+||+|+++|+++.|+..+++.+++.++.+ .||+|+|++|
T Consensus 555 VGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~ 632 (755)
T TIGR01647 555 VGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVI 632 (755)
T ss_pred eeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHH
Confidence 999999 89999999999999999999999999999999999999999999999998877776665544 4699999999
Q ss_pred HHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccc---ccccCCC-Ccccch
Q 001960 851 VNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA---VFRLDGP-DPDLIL 926 (991)
Q Consensus 851 ~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~---~~~~~~~-~~~~~~ 926 (991)
+|+++|. +++++++|++++. ++|. ...++ .++..++..+++.++..+.++++... ++...+. ......
T Consensus 633 ~~l~~d~-~~~~l~~~~~~~~---~~p~---~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (755)
T TIGR01647 633 IAILNDG-TIMTIAYDNVKPS---KLPQ---RWNLR-EVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNL 704 (755)
T ss_pred HHHHHhH-hHhhccCCCCCCC---CCCC---ccchH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhh
Confidence 9999996 6999999998753 3443 33333 66666667777777655544432211 1111111 112357
Q ss_pred hHHHHHHHHHHHHHHHHhhcccccc
Q 001960 927 NTLIFNTFVFCQLQRDGKDKRLQGY 951 (991)
Q Consensus 927 ~t~~f~~~v~~q~~n~~~~r~~~~~ 951 (991)
+|+.|.++++.|.|+.+++|+-...
T Consensus 705 ~t~~f~~~~~~~~~~~~~~r~~~~~ 729 (755)
T TIGR01647 705 QSLIYLQVSISGQATIFVTRTHGFF 729 (755)
T ss_pred HHHHHHHHHHHHHHHHheeccCCCC
Confidence 8999999999999999999976543
No 13
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-119 Score=1015.18 Aligned_cols=847 Identities=30% Similarity=0.419 Sum_probs=713.5
Q ss_pred hhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcc---
Q 001960 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIAT--- 193 (991)
Q Consensus 117 ~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~--- 193 (991)
+...++++++.+.++..+||+..+ +.+++.+-|+|.+++|+..+-|..+.+|+++...++++++|+++++.....
T Consensus 40 H~~~~~eL~~r~~t~~~~Glt~~~--A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 40 HKLSVDELCERYGTSVSQGLTSQE--AAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccCCHHHHHHHhcCChhhcccHHH--HHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 456799999999999999999987 899999999999999999999999999999999999999999887644321
Q ss_pred cC--CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCC
Q 001960 194 EG--WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGD 268 (991)
Q Consensus 194 ~~--~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~---~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd 268 (991)
+. .....|-+. .+..+++++.+..|.|+.+-.+..+ ...+..++|+|||+.+.+..+||||||+|.++-||
T Consensus 118 ~~~~~~~nly~gi----iL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~Gd 193 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGI----VLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGD 193 (1019)
T ss_pred CCCCCCcceEEEE----EEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCC
Confidence 11 122333332 2334445555556666555444332 34577999999999999999999999999999999
Q ss_pred eecccEEEEeecceEEecccCCCCCcceeccC---------CCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCC
Q 001960 269 QVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 339 (991)
Q Consensus 269 ~VPaDgill~g~~l~VDeS~LTGES~pv~k~~---------~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~ 339 (991)
+||||.+++++..|++|+|+|||||+|.++++ ..++-|.+|.+++|.+.++|++||.+|.+|+|..+...-
T Consensus 194 rVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~ 273 (1019)
T KOG0203|consen 194 RVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGL 273 (1019)
T ss_pred cccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhccC
Confidence 99999999999999999999999999998852 245779999999999999999999999999999998887
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHH
Q 001960 340 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 419 (991)
Q Consensus 340 ~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~la 419 (991)
+..++|++..++++..++..+++.+++..|++.++. +. .++.++...+.++++.+|+||+..
T Consensus 274 ~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------gy----------~~l~avv~~i~iivAnvPeGL~~t 335 (1019)
T KOG0203|consen 274 EDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------GY----------EWLRAVVFLIGIIVANVPEGLLAT 335 (1019)
T ss_pred CCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------cc----------hhHHHhhhhheeEEecCcCCccce
Confidence 888899999999999998888777777666543211 11 456777778999999999999999
Q ss_pred HHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHH
Q 001960 420 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 499 (991)
Q Consensus 420 v~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (991)
+|.+++...+||.+++++||++.+.|+||+.++||+|||||||+|+|+|.++|.++...+.+.............+....
T Consensus 336 vTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~ 415 (1019)
T KOG0203|consen 336 VTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFI 415 (1019)
T ss_pred ehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHH
Confidence 99999999999999999999999999999999999999999999999999999988776544321111112222345556
Q ss_pred HHHHHHHhcCCCceeecCCC----ceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCC--
Q 001960 500 LLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE-- 573 (991)
Q Consensus 500 ~l~~~i~~~~~~~~~~~~~~----~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~-- 573 (991)
.+......|+.+.....+.+ +....|++.|.||++++...-.+....|+..+.+..+||||.+|+.-.+.+..+
T Consensus 416 ~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~ 495 (1019)
T KOG0203|consen 416 ALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPS 495 (1019)
T ss_pred HHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCC
Confidence 67778888888887766554 335589999999999998766666788888999999999999999888777544
Q ss_pred -CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC--------CCCCCC
Q 001960 574 -GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF--------SADAPI 644 (991)
Q Consensus 574 -~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~--------~~~~~~ 644 (991)
.++.+.+|||||.++++|+.++ .+|+..|++++.++.+.+...++...|-||++|+++.++++. .+..+.
T Consensus 496 ~~~~~l~mKGape~il~~CSTi~-i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~ 574 (1019)
T KOG0203|consen 496 DPRFLLVMKGAPERILDRCSTIL-INGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNF 574 (1019)
T ss_pred CccceeeecCChHHHHhhcccee-ecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCC
Confidence 4677889999999999999875 578889999999999999999999999999999999987551 122355
Q ss_pred CCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--------------------
Q 001960 645 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-------------------- 704 (991)
Q Consensus 645 ~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~-------------------- 704 (991)
+..++.|+|++.+-||+|+.+|+++..||+|||+|+|+|||++.||+++|++.||..++.
T Consensus 575 p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~ 654 (1019)
T KOG0203|consen 575 PTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSR 654 (1019)
T ss_pred cchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCcc
Confidence 678999999999999999999999999999999999999999999999999999875432
Q ss_pred ----eeeeCcccccCCHHHHhhhccccc--eEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCC
Q 001960 705 ----IAIEGPEFREKSDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 778 (991)
Q Consensus 705 ----~vi~g~~~~~~~~~~~~~~~~~~~--v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~ 778 (991)
.|++|.++..++++++++++.... ||||.||+||+.||+..|++ |.+|+++|||+||+||||.||||||||++
T Consensus 655 ~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVNDsPALKKADIGVAMGia 733 (1019)
T KOG0203|consen 655 DAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVNDSPALKKADIGVAMGIA 733 (1019)
T ss_pred ccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCCChhhcccccceeeccc
Confidence 689999999999999999995443 99999999999999999999 99999999999999999999999999999
Q ss_pred CcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHH
Q 001960 779 GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTL 858 (991)
Q Consensus 779 g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l 858 (991)
|+|++|++||++++||||++|+..+++||.+|+|++|.|.|.++.|+..+.+.+++.+++.+.|+.++++|.+.+..|+.
T Consensus 734 GSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmv 813 (1019)
T KOG0203|consen 734 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIV 813 (1019)
T ss_pred cchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccc
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred HHHHhccCCCCccccccCCCC-CCCCCcCHHHHHHHHH-HHHHHHHHHHHHHHhc---ccc-----cccC----------
Q 001960 859 GALALATEPPNGDLMKRSPVG-RKGNFISNVMWRNILG-QSLYQFLIIWYLQTRG---KAV-----FRLD---------- 918 (991)
Q Consensus 859 ~~lal~~e~~~~~l~~~~P~~-~~~~~~~~~~~~~i~~-~~~~~~~~~~~l~~~~---~~~-----~~~~---------- 918 (991)
||++||+|+|+.++|+|+|+. +++.|+|.+....-.+ .+++|++..|+-+|.. ..+ +++.
T Consensus 814 PAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~D 893 (1019)
T KOG0203|consen 814 PAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVND 893 (1019)
T ss_pred hhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhh
Confidence 999999999999999999996 8889999887654444 3677776655544321 111 1111
Q ss_pred -----CC--C------cccchhHHHHHHHHHHHHHHHHhhcccc------ccc-------------hhhhhhcccccccc
Q 001960 919 -----GP--D------PDLILNTLIFNTFVFCQLQRDGKDKRLQ------GYT-------------EELCLCSCAHLHRS 966 (991)
Q Consensus 919 -----~~--~------~~~~~~t~~f~~~v~~q~~n~~~~r~~~------~~~-------------~~l~~~~~~~~~~~ 966 (991)
|. + -+...+|..|.+.|++|+++.+-|.+-+ ++- ..+.++|++++...
T Consensus 894 l~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~ 973 (1019)
T KOG0203|consen 894 LTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYA 973 (1019)
T ss_pred hhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHH
Confidence 00 0 0123579999999999999999994322 221 23357888999999
Q ss_pred cccCccccceeeeecCccceeee
Q 001960 967 FSNNNHRAPGYICKYNSSQFATV 989 (991)
Q Consensus 967 ~~~~~~~n~~~~~~~~~~~~~~~ 989 (991)
|+++|++..||++.+|++.+.-|
T Consensus 974 l~~~pl~~~~wl~a~P~~ilIfv 996 (1019)
T KOG0203|consen 974 LGMYPLKFQWWLVAFPFGILIFV 996 (1019)
T ss_pred hccCCCCcEEEEecccceeeeee
Confidence 99999999999999999987654
No 14
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.3e-114 Score=1098.17 Aligned_cols=752 Identities=23% Similarity=0.311 Sum_probs=600.8
Q ss_pred CCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHH
Q 001960 133 TDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILL 212 (991)
Q Consensus 133 ~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lll 212 (991)
..||+.++ +++|++.||+|+++.+ .++||+++++++.+|++++++++.++++.- +.|++++.+++.+++
T Consensus 137 ~~GLs~~e--~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~--------~~~~~~~~i~~i~~~ 205 (1054)
T TIGR01657 137 SNGLTTGD--IAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLD--------EYYYYSLCIVFMSST 205 (1054)
T ss_pred ccCCCHHH--HHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhh--------hhHHHHHHHHHHHHH
Confidence 46999887 9999999999999875 589999999999999998887775555432 257788777666555
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeC--CCCeecccEEEEeecceEEecccCC
Q 001960 213 VVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLFVSGFSVLINESSLT 290 (991)
Q Consensus 213 vi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~--~Gd~VPaDgill~g~~l~VDeS~LT 290 (991)
...++...+++..++.+++. .++..++|+|||++++|+++||||||+|.|+ +||+|||||+|++|+ |.||||+||
T Consensus 206 ~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LT 282 (1054)
T TIGR01657 206 SISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEeccccc
Confidence 55555544444444333332 2456899999999999999999999999999 999999999999995 899999999
Q ss_pred CCCcceeccCC-----------------CCeEEeccEEec-------CeEEEEEEEEeccchhhHHHhhhcCCCCCCChh
Q 001960 291 GESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (991)
Q Consensus 291 GES~pv~k~~~-----------------~~~l~sGt~v~~-------g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~l 346 (991)
|||.|+.|.+. ++++|+||.|.+ |.+.++|++||.+|..|++.+++..++...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999631 347999999985 789999999999999999999998888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 001960 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (991)
Q Consensus 347 q~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~ 426 (991)
++...++...+..+ +++.+++++...+.. + ..+...+..++++++++||++||+++++++++
T Consensus 363 ~~~~~~~~~~l~~~----a~i~~i~~~~~~~~~----~----------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~ 424 (1054)
T TIGR01657 363 YKDSFKFILFLAVL----ALIGFIYTIIELIKD----G----------RPLGKIILRSLDIITIVVPPALPAELSIGINN 424 (1054)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHc----C----------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHH
Confidence 88877766544333 333332222111110 1 13567788899999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHH
Q 001960 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF 506 (991)
Q Consensus 427 ~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~ 506 (991)
++.||+|+|++||+++++|++|++|++|||||||||+|+|+|.+++..+......... .. ........+...++
T Consensus 425 ~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~a 498 (1054)
T TIGR01657 425 SLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIV--TE----DSSLKPSITHKALA 498 (1054)
T ss_pred HHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccc--cc----ccccCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999998754321100000 00 00012223445667
Q ss_pred hcCCCceeecCCCceeecCChhhHHHHHHHHHc-CC--C--hHH----------HhhhcceEEEecCCCCCceEEEEEEe
Q 001960 507 NNTGGEVVIGEGNKTEILGTPTETAILEFGLLL-GG--D--FQA----------ERQASKIVKVEPFNSVKKQMGVVIEL 571 (991)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~-g~--~--~~~----------~~~~~~il~~~pF~s~~k~msviv~~ 571 (991)
.||+..... + ...|||+|.|+++++... .. + ... ....+++++.+||+|++|||||+++.
T Consensus 499 ~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~ 573 (1054)
T TIGR01657 499 TCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVST 573 (1054)
T ss_pred hCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEE
Confidence 787764432 2 568999999999986311 10 0 000 02467899999999999999999997
Q ss_pred CC-CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC-----CCCCCCC
Q 001960 572 PE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADAPIP 645 (991)
Q Consensus 572 ~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~-----~~~~~~~ 645 (991)
++ +++++++|||||.|+++|+.. ..++.+.+.+++|+++|+||+++|||++++.. ..+++..
T Consensus 574 ~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~ 641 (1054)
T TIGR01657 574 NDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAV 641 (1054)
T ss_pred cCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHH
Confidence 64 567899999999999999841 11345778899999999999999999987421 1123567
Q ss_pred CCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------
Q 001960 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (991)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--------------------- 704 (991)
|+|++|+|+++++||+||+++++|++|+++||+++|+||||+.||.++|++|||.+++.
T Consensus 642 E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~ 721 (1054)
T TIGR01657 642 ESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFE 721 (1054)
T ss_pred hcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEE
Confidence 89999999999999999999999999999999999999999999999999999975431
Q ss_pred --------------------------------eeeeCccccc---CCHHHHhhhccccceEeccChhhHHHHHHHHHhhc
Q 001960 705 --------------------------------IAIEGPEFRE---KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (991)
Q Consensus 705 --------------------------------~vi~g~~~~~---~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~ 749 (991)
.+++|++++. +.++++.+++.++.||||++|+||.++|+.+|+.
T Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~- 800 (1054)
T TIGR01657 722 VIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKL- 800 (1054)
T ss_pred ecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhC-
Confidence 4677777654 4567888999999999999999999999999998
Q ss_pred CCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 829 (991)
Q Consensus 750 g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~ 829 (991)
|++|+|||||+||+||||+|||||||| . .|+ ..+||+++.+|+|++|+++|++||+++.|++++++|.+.++++..+
T Consensus 801 g~~V~m~GDG~ND~~ALK~AdVGIam~-~-~da-s~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~ 877 (1054)
T TIGR01657 801 DYTVGMCGDGANDCGALKQADVGISLS-E-AEA-SVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFY 877 (1054)
T ss_pred CCeEEEEeCChHHHHHHHhcCcceeec-c-ccc-eeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 3 354 4899999999999999999999999999999999999999988755
Q ss_pred HHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 830 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQT 909 (991)
Q Consensus 830 ~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 909 (991)
..++ ++....||+++|+||+|++++++++++|+.++|.+++|++|| .++++++.++..+++|+++++++.++.++
T Consensus 878 ~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~q~~i~~~~~~~~~~ 952 (1054)
T TIGR01657 878 SVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVF 952 (1054)
T ss_pred HHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 233459999999999999999999999999999999999999 47899999999999999999988777665
Q ss_pred hccc--ccc------cCCCCcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 910 RGKA--VFR------LDGPDPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 910 ~~~~--~~~------~~~~~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
.... ++. .++.......+|++| .++.+|.++.++++...
T Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g 999 (1054)
T TIGR01657 953 ELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKG 999 (1054)
T ss_pred HHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCC
Confidence 4322 321 111111223579999 66666777778887653
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.7e-109 Score=1053.01 Aligned_cols=765 Identities=24% Similarity=0.326 Sum_probs=612.3
Q ss_pred cCCCcCCCCCCccH---HHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 150 YGINKFTESPARGF---WVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSL 226 (991)
Q Consensus 150 ~G~N~~~~~~~~~f---~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~ 226 (991)
|.+|.+...++..+ ++.+|+||+++.+++|++++++++++.++.. +..+.++|+++++++++++++.|+.
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~-------~~~t~~~pL~~v~~~~~~~~~~ed~ 73 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPT-------YRGTSIVPLAFVLIVTAIKEAIEDI 73 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCC-------CccHhHHhHHHHHHHHHHHHHHHHH
Confidence 56799887776665 5899999999999999999999999887542 2345677899999999999999999
Q ss_pred HHHHhhhhcCCcEEEEEeC-CeEEEeecCCcccCcEEEeCCCCeecccEEEEeecc----eEEecccCCCCCcceeccCC
Q 001960 227 QFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNAL 301 (991)
Q Consensus 227 ~~~~l~~~~~~~~v~V~R~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDeS~LTGES~pv~k~~~ 301 (991)
++++.+++.++..++|+|+ |++++|+|+||+|||+|.|++||+|||||+++++++ |+||||+|||||+|+.|...
T Consensus 74 ~r~~~d~~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 74 RRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HHHHhHHHHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 9999999999999999997 899999999999999999999999999999999765 89999999999999988421
Q ss_pred -----------------------------------------------CCeEEeccEEec-CeEEEEEEEEeccchhhHHH
Q 001960 302 -----------------------------------------------NPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLM 333 (991)
Q Consensus 302 -----------------------------------------------~~~l~sGt~v~~-g~~~~~V~~~G~~T~~g~i~ 333 (991)
++++++||.+.+ |++.|+|++||.+|++ +
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~---~ 230 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL---M 230 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---h
Confidence 256889999999 9999999999999955 4
Q ss_pred hhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccC-----CcChHHHHHHHHHHHHHH
Q 001960 334 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIV 408 (991)
Q Consensus 334 ~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~il 408 (991)
.+....+.++|++++++|++..++..+.++++++++++. .++........|+.. ......++..|..++.++
T Consensus 231 ~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 231 RNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGA---GIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred hcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHH---HheecccCCCccceecCcccccchhHHHHHHHHHHHHH
Confidence 455666778899999999998877766665555444432 111110011122211 011123445667788999
Q ss_pred HHHcCCchHHHHHHHHHHHH------HHHhcc----ccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeee
Q 001960 409 VVAVPEGLPLAVTLSLAFAM------KKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (991)
Q Consensus 409 v~~vP~~L~lav~~~l~~~~------~~~~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (991)
+.++|++|+..++++.+.++ .+|.++ +++||+++++|+||++++||+|||||||+|+|+++++++++..|
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999988 788865 49999999999999999999999999999999999999998877
Q ss_pred eecCCC-------CCC-----C----CC-----------------CCCChhHHHHHHHHHHhcCCCceeecCC--C-cee
Q 001960 479 EVDNSK-------GTP-----A----FG-----------------SSIPASASKLLLQSIFNNTGGEVVIGEG--N-KTE 522 (991)
Q Consensus 479 ~~~~~~-------~~~-----~----~~-----------------~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~-~~~ 522 (991)
+.+... ... + .. .....+....+..+++.||++....+++ + ..+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y 467 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITY 467 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEE
Confidence 522110 000 0 00 0000112234556788888877664222 2 224
Q ss_pred ecCChhhHHHHHHHHHcCCChHHH--------------hhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHH
Q 001960 523 ILGTPTETAILEFGLLLGGDFQAE--------------RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 588 (991)
Q Consensus 523 ~~g~p~e~All~~a~~~g~~~~~~--------------~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il 588 (991)
..+||+|.||+++|...|+.+... ...+++++++||+|+||||||+++.+++++.+++|||||.|+
T Consensus 468 ~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il 547 (1057)
T TIGR01652 468 QAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF 547 (1057)
T ss_pred EccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHH
Confidence 479999999999999998765421 246889999999999999999999888889999999999999
Q ss_pred HhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCC--------------CC--------CCCCC
Q 001960 589 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS--------------AD--------APIPT 646 (991)
Q Consensus 589 ~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~--------------~~--------~~~~e 646 (991)
++|++ .+++.++.+.+.+++|+.+|+||+++|||.++++.. .+ .+.+|
T Consensus 548 ~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 617 (1057)
T TIGR01652 548 KRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIE 617 (1057)
T ss_pred HHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 99974 123456778899999999999999999999875310 00 13468
Q ss_pred CCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------
Q 001960 647 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---------------------- 704 (991)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~---------------------- 704 (991)
+|++|+|+++++|||||||+++|+.|++|||++||+|||+.+||.++|++|||.+++.
T Consensus 618 ~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~ 697 (1057)
T TIGR01652 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKF 697 (1057)
T ss_pred hcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986542
Q ss_pred -------------------eeeeCcccccCCHH----HHhhhcccc--ceEeccChhhHHHHHHHHHhhcCCEEEEeCCC
Q 001960 705 -------------------IAIEGPEFREKSDE----ELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 759 (991)
Q Consensus 705 -------------------~vi~g~~~~~~~~~----~~~~~~~~~--~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG 759 (991)
++++|++++.+.++ ++.+++.++ .||||++|+||+++|+.+|+..|++|+|||||
T Consensus 698 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG 777 (1057)
T TIGR01652 698 GLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDG 777 (1057)
T ss_pred HHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 36777777654433 344455444 49999999999999999998668999999999
Q ss_pred CCChHhhhhCCeeEEecCCCcH--HHHhhcCEEeccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 760 TNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 836 (991)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~--~ak~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~ 836 (991)
+||+|||++||||| |+.|+| .|+++||+++.+ |..+.+++ .|||++|.|+++++.|.+++|++.+++.+++.+
T Consensus 778 ~ND~~mlk~AdVGI--gi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~ 853 (1057)
T TIGR01652 778 ANDVSMIQEADVGV--GISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSF 853 (1057)
T ss_pred CccHHHHhhcCeee--EecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 557788 489999999986 99999986 899999999999999999999999999999888
Q ss_pred hcC---CCChhHHHHHHHHHHHhHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHH
Q 001960 837 LTG---NAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYL 907 (991)
Q Consensus 837 ~~~---~~pl~~~qll~~nli~d~l~~lal~~--e~~~~~l~~~~P~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~l 907 (991)
+++ .+|+++++++|+|+++|++|++++|. +++++++|.++|+ +++.++++...+..|+..++||+++++++
T Consensus 854 ~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~ 933 (1057)
T TIGR01652 854 YNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFF 933 (1057)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 655 45889999999999999999999985 6778899999997 67788899888878888999999998776
Q ss_pred HHhccc---ccccCCCC-cccchhHHHHHHHHHHHHHHH
Q 001960 908 QTRGKA---VFRLDGPD-PDLILNTLIFNTFVFCQLQRD 942 (991)
Q Consensus 908 ~~~~~~---~~~~~~~~-~~~~~~t~~f~~~v~~q~~n~ 942 (991)
.+.... .+ .+|.. ......+++|.+.++...+..
T Consensus 934 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~ 971 (1057)
T TIGR01652 934 PMFAYILGDFV-SSGSLDDFSSVGVIVFTALVVIVNLKI 971 (1057)
T ss_pred HHHHHcCCccc-cCCcccchhhHHHHHHHHHHHHHHHHH
Confidence 543221 11 12321 123456777777766554433
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=4.2e-103 Score=984.09 Aligned_cols=736 Identities=21% Similarity=0.291 Sum_probs=587.8
Q ss_pred HhcCCCcCCCCCCccH--H-HHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 001960 148 EIYGINKFTESPARGF--W-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ 224 (991)
Q Consensus 148 ~~~G~N~~~~~~~~~f--~-~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~ 224 (991)
..|..|.+...++..+ . +.+|+||++..|+||++++++++++.++.. ...+.++|+++++++++++++.+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~-------~~~t~~~PL~~vl~v~~ike~~E 157 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-------GRGASILPLAFVLLVTAVKDAYE 157 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC-------CcchHHHHHHHHHHHHHHHHHHH
Confidence 3699999987765432 2 779999999999999999999999987642 23456789999999999999999
Q ss_pred HHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecc----eEEecccCCCCCcceeccC
Q 001960 225 SLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNA 300 (991)
Q Consensus 225 ~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDeS~LTGES~pv~k~~ 300 (991)
+.++++.+++.|+..++|+|+|.+++++|+||+|||+|.|++||+|||||+++++++ |+||||+|||||+|+.|..
T Consensus 158 d~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~ 237 (1178)
T PLN03190 158 DWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYA 237 (1178)
T ss_pred HHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecc
Confidence 999999999999999999999999999999999999999999999999999999554 8999999999999998831
Q ss_pred --------------------------------------------CCCeEEeccEEecC-eEEEEEEEEeccchhhHHHhh
Q 001960 301 --------------------------------------------LNPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMAT 335 (991)
Q Consensus 301 --------------------------------------------~~~~l~sGt~v~~g-~~~~~V~~~G~~T~~g~i~~~ 335 (991)
.++++++||.+.+. ++.|+|++||.+| |++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N 314 (1178)
T PLN03190 238 KQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLN 314 (1178)
T ss_pred cchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhc
Confidence 13467778888774 7999999999999 67777
Q ss_pred hcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcc--ccCCc---------C--h----HHHH
Q 001960 336 LSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHW--TWSGD---------D--A----LEIL 398 (991)
Q Consensus 336 ~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~--~~~~~---------~--~----~~~~ 398 (991)
...+..+.|++++++|++..++..+.+++++++.++.. .+... .....| .|... . . ...+
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~--~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAA--VWLRR-HRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIF 391 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHH--hhhcc-ccccccccccccccccccccccccccchhhHHHH
Confidence 77777889999999999988877666665555443321 11111 011111 11100 0 0 1112
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccc----------cccccchhhhccCCeEEEEeCccCccccCceEE
Q 001960 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK----------ALVRHLAACETMGSATSICSDKTGTLTTNHMTV 468 (991)
Q Consensus 399 ~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~----------ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v 468 (991)
..|...+.++...+|++|++.+.+.....+..|.+|. +.||+.+.+|+||+|++||+|||||||+|+|++
T Consensus 392 ~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~f 471 (1178)
T PLN03190 392 FTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF 471 (1178)
T ss_pred HHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEE
Confidence 2333445666689999999999999977777776654 789999999999999999999999999999999
Q ss_pred EEEEEcCeeeeecCCC-------------C---CCCCC------------CCCC-h--hHHHHHHHHHHhcCCCceeecC
Q 001960 469 LKACICEEIKEVDNSK-------------G---TPAFG------------SSIP-A--SASKLLLQSIFNNTGGEVVIGE 517 (991)
Q Consensus 469 ~~~~~~~~~~~~~~~~-------------~---~~~~~------------~~~~-~--~~~~~l~~~i~~~~~~~~~~~~ 517 (991)
+++++++..|+..... . .+... .... + .....+..+++.||++.+...+
T Consensus 472 k~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~ 551 (1178)
T PLN03190 472 QCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVD 551 (1178)
T ss_pred EEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccC
Confidence 9999988776421100 0 00000 0000 0 1123456788889988764221
Q ss_pred C--C----ce-eecCChhhHHHHHHHHHcCC------------ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEE
Q 001960 518 G--N----KT-EILGTPTETAILEFGLLLGG------------DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRV 578 (991)
Q Consensus 518 ~--~----~~-~~~g~p~e~All~~a~~~g~------------~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~ 578 (991)
+ + .. +.++||+|.||+++|.+.|+ +....+..+++++++||+|+||||||+++.+++.+.+
T Consensus 552 ~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l 631 (1178)
T PLN03190 552 DTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKV 631 (1178)
T ss_pred CCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEE
Confidence 1 1 12 44569999999999999997 3334556899999999999999999999988888999
Q ss_pred EEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCC------------------
Q 001960 579 HCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA------------------ 640 (991)
Q Consensus 579 ~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~------------------ 640 (991)
++|||||.|+++|++.. +++.++.+.+.+++|+++|+|||++|||+++++..+
T Consensus 632 ~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 632 FVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred EEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 99999999999997542 223456788899999999999999999999753110
Q ss_pred ----CCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc------------
Q 001960 641 ----DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------------ 704 (991)
Q Consensus 641 ----~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~------------ 704 (991)
..+.+|+|++++|+++++||+|++++++|++|+++||++||+|||+.+||.+||++|||.+++.
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~ 782 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKES 782 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhh
Confidence 0134689999999999999999999999999999999999999999999999999999975431
Q ss_pred -------------------------------------eeeeCcccccCCH----HHHhhhcccc--ceEeccChhhHHHH
Q 001960 705 -------------------------------------IAIEGPEFREKSD----EELSKLIPKI--QVMARSSPMDKHTL 741 (991)
Q Consensus 705 -------------------------------------~vi~g~~~~~~~~----~~~~~~~~~~--~v~ar~sP~~K~~~ 741 (991)
++++|+++..+.+ +++.++..++ .||||++|.||+++
T Consensus 783 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~I 862 (1178)
T PLN03190 783 CRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGI 862 (1178)
T ss_pred HHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHH
Confidence 4566666665544 3455555444 47999999999999
Q ss_pred HHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcH--HHHhhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHH
Q 001960 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQ 818 (991)
Q Consensus 742 v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~--~ak~~ad~vl~~~~~~~i~~~-i~~gR~~~~~i~k~i~ 818 (991)
|+.+|++.+++|+|||||+||+|||++||||| |++|+| .|+.+||+++.+ |..+.++ +.|||+.|.|+.+.++
T Consensus 863 V~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~ 938 (1178)
T PLN03190 863 VALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMIL 938 (1178)
T ss_pred HHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999874589999999999999999999999 778999 599999999988 9999998 5799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCC---ChhHHHHHHHHHHHhHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHH
Q 001960 819 FQLTVNVVALIVNFSSACLTGNA---PLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVM 889 (991)
Q Consensus 819 ~~l~~n~~~i~~~~~~~~~~~~~---pl~~~qll~~nli~d~l~~lal~~--e~~~~~l~~~~P~----~~~~~~~~~~~ 889 (991)
|.||+|++..+++|+++++++++ .++++.+.++|++++.+|.+++|. ++-+++.+.+.|. +++...++...
T Consensus 939 y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~ 1018 (1178)
T PLN03190 939 YNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKL 1018 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHH
Confidence 99999999999999999887765 468999999999999999999974 3334455555563 56677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 001960 890 WRNILGQSLYQFLIIWYLQT 909 (991)
Q Consensus 890 ~~~i~~~~~~~~~~~~~l~~ 909 (991)
+..|++.++||++++|++.+
T Consensus 1019 F~~w~~~~i~qs~iiff~~~ 1038 (1178)
T PLN03190 1019 FWLTMIDTLWQSAVVFFVPL 1038 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 87888899999999887654
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.5e-91 Score=828.14 Aligned_cols=547 Identities=24% Similarity=0.357 Sum_probs=440.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhccc--CC-CCCcchhHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhhhcCCcEEE
Q 001960 169 EALHDMTLMILAVCALVSLVVGIATE--GW-PKGAHDGLGIVMSILLVVFVTATSD----YKQSLQFKDLDREKKKITVQ 241 (991)
Q Consensus 169 ~~~~~~~~~illi~ai~s~~~~~~~~--~~-~~~~~d~~~i~~~lllvi~v~~~~~----~~~~~~~~~l~~~~~~~~v~ 241 (991)
.++++|..++++++++++++++.+.+ +. +..+++++.|++.+++.++++.+.+ ++.+++.+.|.+..++.+++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 35678999999999999999887633 11 1123556667666667766766664 33334445555544443565
Q ss_pred -EEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCC---CCeEEeccEEecCeEE
Q 001960 242 -VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCK 317 (991)
Q Consensus 242 -V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~---~~~l~sGt~v~~g~~~ 317 (991)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.|+.|..+ ++ +|+||.|.+|+++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~ 185 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLE 185 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCe-eecCceeecceEE
Confidence 6799999999999999999999999999999999999975 9999999999999999876 55 9999999999999
Q ss_pred EEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHH
Q 001960 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (991)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (991)
++|+++|.+|++|||.+++++++.++||+|..+..+...+.. .++++++++..+.. +. .+
T Consensus 186 i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-----i~l~~~~~~~~~~~----------~~-----~~ 245 (673)
T PRK14010 186 VEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-----IFLVVILTMYPLAK----------FL-----NF 245 (673)
T ss_pred EEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-----HHHHHHHHHHHHHh----------hc-----cH
Confidence 999999999999999999999998899999776655433221 11222221110000 00 12
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCee
Q 001960 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (991)
Q Consensus 398 ~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (991)
...+...+++++.+|||+||.+++++++.++++|.|+|+++|+++++|+||++|+||||||||||+|++.++++...+.
T Consensus 246 ~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~- 324 (673)
T PRK14010 246 NLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS- 324 (673)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-
Confidence 2345677888888999999999999999999999999999999999999999999999999999997777666432111
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEec
Q 001960 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (991)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~p 557 (991)
....+++ .....|+.. +.||+++|+++++.+.+.+.... ..+.+|
T Consensus 325 -----------------~~~~~ll-~~a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~p 369 (673)
T PRK14010 325 -----------------SSFERLV-KAAYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIP 369 (673)
T ss_pred -----------------ccHHHHH-HHHHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceec
Confidence 0112222 222223211 45999999999998777653321 123589
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC
Q 001960 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (991)
Q Consensus 558 F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~ 637 (991)
|++++|+|++.++ +. .+.||+++.+++.|+. +|...+. .+.+..++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVL------- 427 (673)
T ss_pred cccccceeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEE-------
Confidence 9999999998743 22 4569999999999984 2222221 25566778999999999875
Q ss_pred CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 001960 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (991)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (991)
.|++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++||..
T Consensus 428 ---------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------- 482 (673)
T PRK14010 428 ---------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------- 482 (673)
T ss_pred ---------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------
Confidence 3578999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCch
Q 001960 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (991)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~ 797 (991)
++||++|+||.++|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|++||||.
T Consensus 483 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls 549 (673)
T PRK14010 483 -----------FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPT 549 (673)
T ss_pred -----------EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHH
Confidence 99999999999999999999 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (991)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~ 833 (991)
+|++++++||++|.|+++++.|.+..|+..++..+.
T Consensus 550 ~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 550 KLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 999999999999999999999999999987665554
No 18
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.7e-90 Score=819.99 Aligned_cols=544 Identities=25% Similarity=0.349 Sum_probs=440.8
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhhhcccC--CCCCcchhHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhhhcCCcEEE
Q 001960 168 WEALHDMTLMILAVCALVSLVVGIATEG--WPKGAHDGLGIVMSIL----LVVFVTATSDYKQSLQFKDLDREKKKITVQ 241 (991)
Q Consensus 168 ~~~~~~~~~~illi~ai~s~~~~~~~~~--~~~~~~d~~~i~~~ll----lvi~v~~~~~~~~~~~~~~l~~~~~~~~v~ 241 (991)
..||++|..+++++++++++++++.... ....|.+++.+.+.++ +..++.+..+++.+++.+.|.+..++..++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 3478899999999999999998864320 0112223333333333 333444556666667777777655555799
Q ss_pred EEeCCe-EEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCC--CeEEeccEEecCeEEE
Q 001960 242 VARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN--PFLLSGTKVQNGSCKM 318 (991)
Q Consensus 242 V~R~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~--~~l~sGt~v~~g~~~~ 318 (991)
|+|||+ +++|++++|+|||+|.+++||+|||||++++|. ..||||+|||||.|+.|..++ +.+|+||.|.+|++++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 899999999999999999999999999999997 599999999999999998653 3499999999999999
Q ss_pred EEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHH
Q 001960 319 LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL 398 (991)
Q Consensus 319 ~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (991)
+|+++|.+|++|||.+++++++.++||+|..++.+...+..+.+++++..+. ..++. + . .
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~---~~~~~-----g-------~---~-- 246 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP---FAAYS-----G-------G---A-- 246 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH---HHHHh-----C-------c---h--
Confidence 9999999999999999999998889999988887765554332222111111 11110 0 0 1
Q ss_pred HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeee
Q 001960 399 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 478 (991)
Q Consensus 399 ~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 478 (991)
..+..++++++++|||+|+.+.++....++++|.++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 247 ~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~- 325 (679)
T PRK01122 247 LSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV- 325 (679)
T ss_pred HHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-
Confidence 1467789999999999999999999999999999999999999999999999999999999999999999987643211
Q ss_pred eecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHH-cCCChHHHhhhcceEEEec
Q 001960 479 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEP 557 (991)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~g~~~~~~~~~~~il~~~p 557 (991)
++ +.+....+.++.+ +.||..+|+++++.+ .+.+.. +..++..+.+|
T Consensus 326 ---------------~~---~~ll~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~~--~~~~~~~~~~p 373 (679)
T PRK01122 326 ---------------TE---EELADAAQLSSLA------------DETPEGRSIVVLAKQRFNLRER--DLQSLHATFVP 373 (679)
T ss_pred ---------------CH---HHHHHHHHHhcCC------------CCCchHHHHHHHHHhhcCCCch--hhccccceeEe
Confidence 11 1122333333221 348999999999976 343321 22355678899
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC
Q 001960 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (991)
Q Consensus 558 F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~ 637 (991)
|++.+|+|++.+. + +.+.||++|.+++.|+. +|... .+++.+.+++++++|+|++++|+
T Consensus 374 F~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~------ 432 (679)
T PRK01122 374 FSAQTRMSGVDLD---G--REIRKGAVDAIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE------ 432 (679)
T ss_pred ecCcCceEEEEEC---C--EEEEECCHHHHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE------
Confidence 9999998887542 2 47899999999999963 22221 14567778899999999999983
Q ss_pred CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 001960 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (991)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (991)
|++++|+++++||+|||++++|++||++||+++|+||||+.||.+||+++||..
T Consensus 433 ----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~---------------- 486 (679)
T PRK01122 433 ----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---------------- 486 (679)
T ss_pred ----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----------------
Confidence 578999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCch
Q 001960 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (991)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~ 797 (991)
++||++|+||.++|+.+|++ |++|+|+|||+||+|||++|||||||| +|+|+||++||+|++||||.
T Consensus 487 -----------v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s 553 (679)
T PRK01122 487 -----------FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPT 553 (679)
T ss_pred -----------EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHH
Confidence 99999999999999999999 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (991)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~n~~ 826 (991)
+|++++++||+..-.--..-.|++. |-+
T Consensus 554 ~Iv~av~~GR~~~~tr~~~~~f~~~-n~~ 581 (679)
T PRK01122 554 KLIEVVEIGKQLLMTRGALTTFSIA-NDV 581 (679)
T ss_pred HHHHHHHHHHHHHhhhHhhhhhhHH-HHH
Confidence 9999999999999777777888876 544
No 19
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.8e-94 Score=873.05 Aligned_cols=737 Identities=24% Similarity=0.340 Sum_probs=591.9
Q ss_pred HHHhcCCCcCCCCCCcc--HH-HHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 001960 146 RKEIYGINKFTESPARG--FW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDY 222 (991)
Q Consensus 146 r~~~~G~N~~~~~~~~~--f~-~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~ 222 (991)
+...|-.|.+.+.++.. |+ +.+|+||++..|++|+++++++.++ +.+ +...+.++|+++|+.+++++|.
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~-------~~~~~~~~pl~~vl~~t~iKd~ 99 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSP-------FNPYTTLVPLLFVLGITAIKDA 99 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccc-------cCccceeeceeeeehHHHHHHH
Confidence 44589999998877644 33 7899999999999999999999998 542 2233456799999999999999
Q ss_pred HHHHHHHHhhhhcCCcEEEEEeCCe-EEEeecCCcccCcEEEeCCCCeecccEEEEeecc----eEEecccCCCCCccee
Q 001960 223 KQSLQFKDLDREKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVN 297 (991)
Q Consensus 223 ~~~~~~~~l~~~~~~~~v~V~R~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~----l~VDeS~LTGES~pv~ 297 (991)
.|+.++++.|++.|+.++.|+|++. +.+..|++|+|||+|.+..++.+|||.+|++++. |+|++++|+||++.+.
T Consensus 100 ~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 100 IEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred HhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 9999999999999999999999644 8999999999999999999999999999999875 9999999999999987
Q ss_pred cc----------------------------------------------CCCCeEEeccEEecC-eEEEEEEEEeccchhh
Q 001960 298 VN----------------------------------------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWG 330 (991)
Q Consensus 298 k~----------------------------------------------~~~~~l~sGt~v~~g-~~~~~V~~~G~~T~~g 330 (991)
|. ..++.+++|+++.+. .+.+.|+.+|.+|
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt--- 256 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT--- 256 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---
Confidence 71 012357889999885 5899999999999
Q ss_pred HHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC--CccccCCcC-hHHHHHHHHHHHHH
Q 001960 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG--THWTWSGDD-ALEILEFFAIAVTI 407 (991)
Q Consensus 331 ~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~i~i 407 (991)
|++.+...++.+++++++.+|.....+..+.++++++..+.. .......... ..|+....+ .......|..++.+
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il 334 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGF--AIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIIL 334 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhh--heeeeecccccCchhhhcCchHHHHHHHHHHHHHhh
Confidence 677777788899999999999876655544444333332221 1111111111 112222221 22345556777888
Q ss_pred HHHHcCCchHHHHHHHHHHHHHH------Hh----ccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCee
Q 001960 408 VVVAVPEGLPLAVTLSLAFAMKK------MM----NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (991)
Q Consensus 408 lv~~vP~~L~lav~~~l~~~~~~------~~----~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (991)
+...+|.+|...+.+.-...+.- |. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.+.|..
T Consensus 335 ~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~ 414 (1151)
T KOG0206|consen 335 YQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTS 414 (1151)
T ss_pred hhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcc
Confidence 88999999999888877666532 33 347889999999999999999999999999999999999999887
Q ss_pred eeecCCCC-------C---------------CC------CCCCCChhHHHHHHHHHHhcCCCceeecCC--CceeecCCh
Q 001960 478 KEVDNSKG-------T---------------PA------FGSSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTP 527 (991)
Q Consensus 478 ~~~~~~~~-------~---------------~~------~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~--~~~~~~g~p 527 (991)
|+...... . ++ ..+....+....+..+++.||+...+.+++ ...+.+.||
T Consensus 415 yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SP 494 (1151)
T KOG0206|consen 415 YGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESP 494 (1151)
T ss_pred cccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCC
Confidence 76332110 0 00 000012233445667889999888777333 235668999
Q ss_pred hhHHHHHHHHHcCCChHHH------------hhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccc
Q 001960 528 TETAILEFGLLLGGDFQAE------------RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFL 595 (991)
Q Consensus 528 ~e~All~~a~~~g~~~~~~------------~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (991)
+|.|+++.|++.|+.+..+ ...++++++.||+|.|||||||++.|++++.+|||||+.+|++++..
T Consensus 495 DE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~-- 572 (1151)
T KOG0206|consen 495 DEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK-- 572 (1151)
T ss_pred cHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh--
Confidence 9999999999999876432 34899999999999999999999999999999999999999999874
Q ss_pred cCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC---------------C-------CCCCCCCCCcEEEE
Q 001960 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF---------------S-------ADAPIPTEGYTCIG 653 (991)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~---------------~-------~~~~~~e~~l~~lG 653 (991)
-.+..++...+++++||.+||||||+|||+++++. . +..+.+|+||+++|
T Consensus 573 --------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 573 --------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred --------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 22445667788999999999999999999998761 0 11256799999999
Q ss_pred EeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------------
Q 001960 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------- 704 (991)
Q Consensus 654 ~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----------------------------- 704 (991)
.+++||+||+||+++|+.|++||||+||+|||+.+||.+||.+|++..++.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~ 724 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRK 724 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999986532
Q ss_pred ------------------eeeeCcccccCCHHHHh----hhc--cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCC
Q 001960 705 ------------------IAIEGPEFREKSDEELS----KLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 760 (991)
Q Consensus 705 ------------------~vi~g~~~~~~~~~~~~----~~~--~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ 760 (991)
++|+|+.+....+.+.+ ++. ++..+|||++|.||+.+|+..++..+.++++||||+
T Consensus 725 ~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGA 804 (1151)
T KOG0206|consen 725 FTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGA 804 (1151)
T ss_pred hhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCC
Confidence 34445444332222122 222 566799999999999999999877789999999999
Q ss_pred CChHhhhhCCeeEEecCCCcHH--HHhhcCEEeccCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001960 761 NDAPALHEADIGLAMGIAGTEV--AKESADVIILDDNFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 837 (991)
Q Consensus 761 ND~~al~~Advgiamg~~g~~~--ak~~ad~vl~~~~~~~i~~~-i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~ 837 (991)
||++|+++||||| ||+|.|+ |..+||+.+.+ |.-+.++ +.|||+.|.|+.+++.|.+|+|+...++.|++.++
T Consensus 805 NDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIaq--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~ 880 (1151)
T KOG0206|consen 805 NDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIAQ--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFF 880 (1151)
T ss_pred ccchheeeCCcCe--eeccchhhhhhhcccchHHH--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999 6677776 88999999998 7777776 79999999999999999999999999999999987
Q ss_pred cC---CCChhHHHHHHHHHHHhHHHHHHhcc--CCCCccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 001960 838 TG---NAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQ 908 (991)
Q Consensus 838 ~~---~~pl~~~qll~~nli~d~l~~lal~~--e~~~~~l~~~~P~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~ 908 (991)
+| +..++.+++.++|++++.+|.+++|. .+.+++.+.+.|. +++..++++..++.|+..++||++++|++.
T Consensus 881 ~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~ 960 (1151)
T KOG0206|consen 881 NGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLP 960 (1151)
T ss_pred CCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeee
Confidence 66 45789999999999999999999985 4566666667774 666678888888888889999999988765
Q ss_pred H
Q 001960 909 T 909 (991)
Q Consensus 909 ~ 909 (991)
+
T Consensus 961 ~ 961 (1151)
T KOG0206|consen 961 Y 961 (1151)
T ss_pred H
Confidence 4
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-88 Score=780.84 Aligned_cols=754 Identities=22% Similarity=0.317 Sum_probs=567.4
Q ss_pred cCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHH
Q 001960 132 ITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSIL 211 (991)
Q Consensus 132 ~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~ll 211 (991)
...||+..+ +.+|+..||+|.+.. +.++.+.++.++.-+|+..+. ++|+++|...+ .+|.+..|++.-+
T Consensus 157 ~~~gL~~~~--~~~r~~iyG~N~i~l-~ik~i~~iLv~EvL~PfYlFQ----~fSv~lW~~d~----Y~~YA~cI~iisv 225 (1140)
T KOG0208|consen 157 VSNGLERQE--IIDRRIIYGRNVISL-PIKSISQILVKEVLNPFYLFQ----AFSVALWLADS----YYYYAFCIVIISV 225 (1140)
T ss_pred ccCCccHHH--HHhHHhhcCCceeee-ecccHHHHHHHhccchHHHHH----hHHhhhhhccc----chhhhhHHHHHHH
Confidence 357898876 899999999999865 467899999999988887665 44455554432 3334444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCC-CCeecccEEEEeecceEEecccCC
Q 001960 212 LVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSLT 290 (991)
Q Consensus 212 lvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~-Gd~VPaDgill~g~~l~VDeS~LT 290 (991)
.-++++....-.++++.+++-+ ....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|+ |.||||+||
T Consensus 226 ~Si~~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmLT 302 (1140)
T KOG0208|consen 226 YSIVLSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESMLT 302 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeeccccc
Confidence 3333333333334444444432 3358999999999999999999999999998 99999999999996 899999999
Q ss_pred CCCcceeccC------------------CCCeEEeccEEec------CeEEEEEEEEeccchhhHHHhhhcCCCCCCChh
Q 001960 291 GESEPVNVNA------------------LNPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPL 346 (991)
Q Consensus 291 GES~pv~k~~------------------~~~~l~sGt~v~~------g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~l 346 (991)
|||.|+.|.+ ..+++|+||++.+ +.+.+.|++||.+|..|++.+++..++..
T Consensus 303 GESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~---- 378 (1140)
T KOG0208|consen 303 GESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPV---- 378 (1140)
T ss_pred CCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCc----
Confidence 9999999952 2357999999974 67899999999999999999999887543
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 001960 347 QVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (991)
Q Consensus 347 q~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~ 426 (991)
..++-+-+..+.....++|++.|+...+.+.... . .+-..++.++.++.+.+|++||.+.++...+
T Consensus 379 ~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~~g-----------~---~~~~iiirsLDliTi~VPPALPAaltvG~~~ 444 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVIIALIGFIYTAIVLNLLG-----------V---PLKTIIIRSLDLITIVVPPALPAALTVGIIY 444 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHHcC-----------C---CHHHHhhhhhcEEEEecCCCchhhhhHHHHH
Confidence 3333233333333334444455544333322211 1 2446678889999999999999999999999
Q ss_pred HHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCee-eeec--CCC--CC----CCCCCCCChhH
Q 001960 427 AMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI-KEVD--NSK--GT----PAFGSSIPASA 497 (991)
Q Consensus 427 ~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~-~~~~--~~~--~~----~~~~~~~~~~~ 497 (991)
+.+|+.|+||.|-+++.+...|+++++|||||||||++.+.+..+..-... ...+ ... .. .....+.....
T Consensus 445 a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 524 (1140)
T KOG0208|consen 445 AQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLP 524 (1140)
T ss_pred HHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCc
Confidence 999999999999999999999999999999999999999999887763221 0000 000 00 00000000111
Q ss_pred HHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHH-c------CCCh------------------HHHh----h
Q 001960 498 SKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-L------GGDF------------------QAER----Q 548 (991)
Q Consensus 498 ~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~-~------g~~~------------------~~~~----~ 548 (991)
...+..+++.||+.....+ ...|+|.|.-+.+...- . +... .... .
T Consensus 525 ~~~~~~a~atCHSL~~v~g-----~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~ 599 (1140)
T KOG0208|consen 525 MGNLVAAMATCHSLTLVDG-----TLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEG 599 (1140)
T ss_pred hHHHHHHHhhhceeEEeCC-----eeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCc
Confidence 2345677888885443322 34677777666543210 0 0000 0000 1
Q ss_pred hcceEEEecCCCCCceEEEEEEeCC-CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHccccee
Q 001960 549 ASKIVKVEPFNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTL 627 (991)
Q Consensus 549 ~~~il~~~pF~s~~k~msviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l 627 (991)
.+.+++.+||+|..+||||++..++ ....+|+|||||.|.+.|+. +.+ .+.+++.++.|+.+|+|++
T Consensus 600 ~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~tv------P~dy~evl~~Yt~~GfRVI 667 (1140)
T KOG0208|consen 600 EISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------ETV------PADYQEVLKEYTHQGFRVI 667 (1140)
T ss_pred ceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------ccC------CccHHHHHHHHHhCCeEEE
Confidence 4779999999999999999999763 67899999999999999974 222 2458899999999999999
Q ss_pred eeeEEecCCC-----CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC
Q 001960 628 CLACMEIGNE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD 702 (991)
Q Consensus 628 ~~A~~~l~~~-----~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~ 702 (991)
|+|+|.++.. ....++..|.|++|+|++.+|+++|++++.+|++|++|+||++|+||||..||..+||+||++.+
T Consensus 668 AlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p 747 (1140)
T KOG0208|consen 668 ALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEP 747 (1140)
T ss_pred EEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCC
Confidence 9999999876 12356788999999999999999999999999999999999999999999999999999999865
Q ss_pred Cc-------------------------------------------------------eeeeCcccccC---CHHHHhhhc
Q 001960 703 NG-------------------------------------------------------IAIEGPEFREK---SDEELSKLI 724 (991)
Q Consensus 703 ~~-------------------------------------------------------~vi~g~~~~~~---~~~~~~~~~ 724 (991)
.. .+++|+.|+-+ ..+.+.+++
T Consensus 748 ~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il 827 (1140)
T KOG0208|consen 748 QVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKIL 827 (1140)
T ss_pred CCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHH
Confidence 32 45556655433 356777888
Q ss_pred cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+..||||++|.||.++|+.||+. |..|+|+|||+||+.|||+||+||+++.+ .|.-+|.+.-.-.+.+.+.++|+
T Consensus 828 ~~~~VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSea---EASvAApFTSk~~~I~cVp~vIr 903 (1140)
T KOG0208|consen 828 LKGTVFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSEA---EASVAAPFTSKTPSISCVPDVIR 903 (1140)
T ss_pred hcCeEEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhhh---hHhhcCccccCCCchhhHhHHHh
Confidence 899999999999999999999988 99999999999999999999999998732 35566888887778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCC
Q 001960 805 WGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 884 (991)
Q Consensus 805 ~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~ 884 (991)
+||+....--..++|...|.++..+..+ .++....-++..|.++++++..++-+++++..+|..++-..|| +..+
T Consensus 904 EGRaALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L 978 (1140)
T KOG0208|consen 904 EGRAALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNL 978 (1140)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---Cccc
Confidence 9999999999999999888776544333 2345567899999999999999999999999999999988888 5678
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcc--cccccCCC----CcccchhHHHHHHHHHHHHHHHH
Q 001960 885 ISNVMWRNILGQSLYQFLIIWYLQTRGK--AVFRLDGP----DPDLILNTLIFNTFVFCQLQRDG 943 (991)
Q Consensus 885 ~~~~~~~~i~~~~~~~~~~~~~l~~~~~--~~~~~~~~----~~~~~~~t~~f~~~v~~q~~n~~ 943 (991)
+++..+...++|.++..++.+...+.+. +|+....+ +-.....|.+|..--|.-+|+.+
T Consensus 979 ~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~ 1043 (1140)
T KOG0208|consen 979 LSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIAL 1043 (1140)
T ss_pred cccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhhe
Confidence 9998888888888877777776665443 34432111 11233467777666565556553
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=3.9e-86 Score=782.51 Aligned_cols=546 Identities=26% Similarity=0.368 Sum_probs=447.1
Q ss_pred HHHhhHHHHHHHHHHHHHHHhhhcc--cC---CCCCcchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEE
Q 001960 169 EALHDMTLMILAVCALVSLVVGIAT--EG---WPKGAHDGL---GIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITV 240 (991)
Q Consensus 169 ~~~~~~~~~illi~ai~s~~~~~~~--~~---~~~~~~d~~---~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v 240 (991)
.||+||..+++++++++++++++.. .+ ...+||++. .+++.+++..++.+..+++.+++.++|.+..++..+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4688999999999999999987642 11 113588753 233344555566667788888888888876656578
Q ss_pred EEEe-CCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCC--eEEeccEEecCeEE
Q 001960 241 QVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCK 317 (991)
Q Consensus 241 ~V~R-~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~--~l~sGt~v~~g~~~ 317 (991)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++. .+++||.|.+|+++
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8886 899999999999999999999999999999999996 6999999999999999987653 49999999999999
Q ss_pred EEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHH
Q 001960 318 MLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 397 (991)
Q Consensus 318 ~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (991)
++|+++|.+|++|||.+++++++.++||+|..++.+...+..+.++ +++.++.... |.+. .
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~------------~~~~---~- 247 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAA------------YGGN---A- 247 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHH------------hcCh---h-
Confidence 9999999999999999999999888999998888776544322221 1122221110 1110 1
Q ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCee
Q 001960 398 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI 477 (991)
Q Consensus 398 ~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 477 (991)
..+..++++++++|||+|+...+.....++++|.++|+++|+++++|+||++|+||||||||||+|+|++++++..+..
T Consensus 248 -~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~ 326 (675)
T TIGR01497 248 -ISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV 326 (675)
T ss_pred -HHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC
Confidence 1356678899999999888888877778999999999999999999999999999999999999999999987743211
Q ss_pred eeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEec
Q 001960 478 KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEP 557 (991)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~p 557 (991)
+ ..+ +....+.++. .+.||.++|+++++.+.|.+... ..++..+..|
T Consensus 327 ----------------~--~~~-ll~~aa~~~~------------~s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~p 373 (675)
T TIGR01497 327 ----------------D--EKT-LADAAQLASL------------ADDTPEGKSIVILAKQLGIREDD--VQSLHATFVE 373 (675)
T ss_pred ----------------c--HHH-HHHHHHHhcC------------CCCCcHHHHHHHHHHHcCCCccc--cccccceEEE
Confidence 0 111 2233333321 14689999999999887764332 1234567899
Q ss_pred CCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC
Q 001960 558 FNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE 637 (991)
Q Consensus 558 F~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~ 637 (991)
|++.+|+|++.+. ++ +.++||++|.+++.|+. +|...+ ..+.+.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------ 433 (675)
T TIGR01497 374 FTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------ 433 (675)
T ss_pred EcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------
Confidence 9999888877543 23 46899999999988852 222211 3467778899999999999995
Q ss_pred CCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 001960 638 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD 717 (991)
Q Consensus 638 ~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~ 717 (991)
+.+++|+++++||+|||++++|++|+++|++++|+|||+..+|.++|+++||..
T Consensus 434 ----------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------- 487 (675)
T TIGR01497 434 ----------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------- 487 (675)
T ss_pred ----------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------
Confidence 358999999999999999999999999999999999999999999999999964
Q ss_pred HHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCch
Q 001960 718 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 797 (991)
Q Consensus 718 ~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~ 797 (991)
+++|++|+||.++|+.+|++ |+.|+|+|||.||+|||++|||||||| +|+++|+++||++++||||.
T Consensus 488 -----------v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 488 -----------FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred -----------EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHH
Confidence 89999999999999999998 999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 798 TIVTVAKWGRSVYINIQKFVQFQLTVNVVA 827 (991)
Q Consensus 798 ~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~ 827 (991)
+++++++|||+++.+......|++.-+++-
T Consensus 555 ~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~ 584 (675)
T TIGR01497 555 KLIEVVHIGKQLLITRGALTTFSIANDVAK 584 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHheeeecccHHH
Confidence 999999999999999999999999877753
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-87 Score=794.67 Aligned_cols=651 Identities=26% Similarity=0.333 Sum_probs=493.4
Q ss_pred hccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCC-ccccccccccCCcccChhhhhhhhccCCh---HHHHhh
Q 001960 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSS-EYTVPEEVAASGFQICPDELGSIVEGHDI---KKLKVH 118 (991)
Q Consensus 43 ~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~l~~~ 118 (991)
+.+..+.| ++++.+++++++||+.++++.+.|++. ... ..++...++..||............+.+. +.+.+.
T Consensus 14 a~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~--~~~~~~~~~~~v~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (713)
T COG2217 14 AACASRIE-ALNKLPGVEEARVNLATERATVVYDPE--EVDLPADIVAAVEKAGYSARLTAALADPAEAEARLLRELLRR 90 (713)
T ss_pred HHHHHHHH-HHhcCCCeeEEEeecccceEEEEeccc--ccccHHHHHHHHHhcCccccccccccchhhhhhhhhhhHHHH
Confidence 35667778 899999999999999999999999865 223 56788888999998765111111111000 111221
Q ss_pred CCHHHHHH----HhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHH--HH-HHHHHHHHhhh
Q 001960 119 GGVEGIAE----KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMI--LA-VCALVSLVVGI 191 (991)
Q Consensus 119 ~~v~~~~~----~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~i--ll-i~ai~s~~~~~ 191 (991)
..+.++.. .+......|. . ........-.-......+.+|++..|+.+++....+ |+ ++++.+++++.
T Consensus 91 ~~i~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~l~~~v~~~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~ 165 (713)
T COG2217 91 LIIAGLLTLPLLLLSLGLLLGA--F---LLPWVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSL 165 (713)
T ss_pred HHHHHHHHHHHHHHHHHhhcch--h---hHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 12333222 1111111111 0 111100000000001247788889999998764443 22 22223334443
Q ss_pred cccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hcCCcEEEEEe-CCeEEEeecCCcccCcEEEe
Q 001960 192 ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQVAR-NGFRRKISIYDLLPGDIVHL 264 (991)
Q Consensus 192 ~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~------~~~~~~v~V~R-~G~~~~I~~~dLvvGDIV~l 264 (991)
+..-++ .||+..++++.+++ +++|.|++.+.+..+ ...+..+++++ ||+.++|+++||+|||+|.|
T Consensus 166 ~~~~~~-~yf~~aa~ii~l~~------~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~V 238 (713)
T COG2217 166 YATLFP-VYFEEAAMLIFLFL------LGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLV 238 (713)
T ss_pred HHHhhh-hHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEE
Confidence 311111 56666655544444 377777776655332 34677887776 56699999999999999999
Q ss_pred CCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCC
Q 001960 265 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDET 344 (991)
Q Consensus 265 ~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t 344 (991)
+|||+||+||++++|++ .||||+|||||.|+.|.+++. +++||.+.+|..++.|+++|.+|.+++|.+++++++..++
T Consensus 239 rpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka 316 (713)
T COG2217 239 RPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKA 316 (713)
T ss_pred CCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCc
Confidence 99999999999999997 999999999999999998886 9999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHH
Q 001960 345 PLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 424 (991)
Q Consensus 345 ~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l 424 (991)
|.|+..|+++.++++..+++++++|++|.+.. + + .+...+..++++++++|||+|.+++|+++
T Consensus 317 ~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~-------~--~--------~~~~a~~~a~avLVIaCPCALgLAtP~ai 379 (713)
T COG2217 317 PIQRLADRVASYFVPVVLVIAALTFALWPLFG-------G--G--------DWETALYRALAVLVIACPCALGLATPTAI 379 (713)
T ss_pred hHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc-------C--C--------cHHHHHHHHHhheeeeCccHHHhHHHHHH
Confidence 99999999999999999999999988654211 0 0 24467889999999999999999999999
Q ss_pred HHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHH
Q 001960 425 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 504 (991)
Q Consensus 425 ~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 504 (991)
..++.+..++|+|+|+.+++|+++++|+++||||||||+|+|+|+++...+. + .++.+++.
T Consensus 380 ~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~--------------e~~~L~la--- 440 (713)
T COG2217 380 LVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D--------------EDELLALA--- 440 (713)
T ss_pred HHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--C--------------HHHHHHHH---
Confidence 9999999999999999999999999999999999999999999999876432 0 12333332
Q ss_pred HHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCch
Q 001960 505 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGAS 584 (991)
Q Consensus 505 i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~ 584 (991)
+.++ ..+.||..+|+++++...+.... +..+.+| -.++.-+.++.. +.-|.+
T Consensus 441 ------AalE-------~~S~HPiA~AIv~~a~~~~~~~~------~~~~~i~------G~Gv~~~v~g~~---v~vG~~ 492 (713)
T COG2217 441 ------AALE-------QHSEHPLAKAIVKAAAERGLPDV------EDFEEIP------GRGVEAEVDGER---VLVGNA 492 (713)
T ss_pred ------HHHH-------hcCCChHHHHHHHHHHhcCCCCc------cceeeec------cCcEEEEECCEE---EEEcCH
Confidence 1122 23789999999999887662110 0011111 123322333322 333776
Q ss_pred HHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCccc
Q 001960 585 EIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG 664 (991)
Q Consensus 585 e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~ 664 (991)
..+.+. +.. .+. ..+..+.+..+|..++.++ .|.+++|+++++|++||+
T Consensus 493 ~~~~~~--------~~~--~~~-----~~~~~~~~~~~G~t~v~va----------------~dg~~~g~i~~~D~~R~~ 541 (713)
T COG2217 493 RLLGEE--------GID--LPL-----LSERIEALESEGKTVVFVA----------------VDGKLVGVIALADELRPD 541 (713)
T ss_pred HHHhhc--------CCC--ccc-----hhhhHHHHHhcCCeEEEEE----------------ECCEEEEEEEEeCCCChh
Confidence 654321 111 110 3445667788888777776 355899999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHH
Q 001960 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 744 (991)
Q Consensus 665 v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~ 744 (991)
++++|++||+.|+++.|+||||..+|.++|+++||.. ++|.+.|+||.++|+.
T Consensus 542 a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~---------------------------v~AellPedK~~~V~~ 594 (713)
T COG2217 542 AKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE---------------------------VRAELLPEDKAEIVRE 594 (713)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh---------------------------heccCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999964 9999999999999999
Q ss_pred HHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 745 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 824 (991)
Q Consensus 745 l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n 824 (991)
||++ |++|+|+|||+||+|||++|||||||| +|+|+|+++||+++++||+..++++++.+|+++++|++|+.|++.||
T Consensus 595 l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn 672 (713)
T COG2217 595 LQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYN 672 (713)
T ss_pred HHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 999999999999999999999999999 79999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 001960 825 VVALIVNFSS 834 (991)
Q Consensus 825 ~~~i~~~~~~ 834 (991)
+++++++..+
T Consensus 673 ~~~iplA~~g 682 (713)
T COG2217 673 AIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHh
Confidence 9999988864
No 23
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-86 Score=734.23 Aligned_cols=749 Identities=22% Similarity=0.291 Sum_probs=579.1
Q ss_pred HHHHhcCCCcCCCCCCc--cHH-HHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHH
Q 001960 145 RRKEIYGINKFTESPAR--GFW-VYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSD 221 (991)
Q Consensus 145 ~r~~~~G~N~~~~~~~~--~f~-~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~ 221 (991)
.++++|-+|.+...+++ +|. ..+++||+-+.+.++++.+..++++.+.. | + ..+...|+.++.+++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~i-g----~--l~ty~~pl~fvl~itl~ke 146 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKI-G----Y--LSTYWGPLGFVLTITLIKE 146 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchhee-c----c--hhhhhHHHHHHHHHHHHHH
Confidence 34578888888766543 333 67899999999999999999999887643 2 2 2344567888889999999
Q ss_pred HHHHHHHHHhhhhcCCcEEEEE-eCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeec----ceEEecccCCCCCcce
Q 001960 222 YKQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF----SVLINESSLTGESEPV 296 (991)
Q Consensus 222 ~~~~~~~~~l~~~~~~~~v~V~-R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~----~l~VDeS~LTGES~pv 296 (991)
..++.++++-+++.|+...+++ |+|...+ ++++|+|||+|.++.+++||||.+++.++ +|.|.+..|+||++++
T Consensus 147 avdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWK 225 (1051)
T KOG0210|consen 147 AVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWK 225 (1051)
T ss_pred HHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccce
Confidence 9999999999988888887777 6776555 99999999999999999999999999876 3899999999999987
Q ss_pred ecc----------------------------------------------CCCCeEEeccEEecCeEEEEEEEEeccchhh
Q 001960 297 NVN----------------------------------------------ALNPFLLSGTKVQNGSCKMLVTTVGMRTQWG 330 (991)
Q Consensus 297 ~k~----------------------------------------------~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g 330 (991)
.|- .-++.++++|.+.+|.+.++|++||.+|
T Consensus 226 Lrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dt--- 302 (1051)
T KOG0210|consen 226 LRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDT--- 302 (1051)
T ss_pred eeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccH---
Confidence 760 1145799999999999999999999999
Q ss_pred HHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHH
Q 001960 331 KLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 410 (991)
Q Consensus 331 ~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~ 410 (991)
+-+.+...++.+-.-++..+|.+.+++..+.++++++.... .|... .|...+..++.++..
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~-----------~g~~~--------~wyi~~~RfllLFS~ 363 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM-----------KGFGS--------DWYIYIIRFLLLFSS 363 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh-----------hcCCC--------chHHHHHHHHHHHhh
Confidence 55556667777777888899999988877666655443321 01101 233456666777778
Q ss_pred HcCCchHHHHHHHHHHHHHHHhcc----ccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCC---
Q 001960 411 AVPEGLPLAVTLSLAFAMKKMMND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS--- 483 (991)
Q Consensus 411 ~vP~~L~lav~~~l~~~~~~~~~~----~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--- 483 (991)
.+|.+|-..+.++...-.+.+.+| |.+||+.+..|+||++.++.+|||||||+|+|.+++++.+.-.|..+..
T Consensus 364 IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV 443 (1051)
T KOG0210|consen 364 IIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEV 443 (1051)
T ss_pred hceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHH
Confidence 899999999999988888888776 6779999999999999999999999999999999999987544432110
Q ss_pred ------------CCC----CCCCCCCChhHHHHHHHHHHhcCCCceeecCCC-ceeecCChhhHHHHHHHHHcCCChHHH
Q 001960 484 ------------KGT----PAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEILGTPTETAILEFGLLLGGDFQAE 546 (991)
Q Consensus 484 ------------~~~----~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~-~~~~~g~p~e~All~~a~~~g~~~~~~ 546 (991)
... .......+..+ .-+.++++.||+..+..+++| ..++..||+|.|+++|....|.....+
T Consensus 444 ~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv-~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~R 522 (1051)
T KOG0210|consen 444 SQHIQSLYTPGRNKGKGALSRVKKDMSARV-RNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKR 522 (1051)
T ss_pred HHHHHHhhCCCcccccccchhhcCcccHHH-HHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeec
Confidence 000 00011122222 334578889999888887765 456699999999999998888764332
Q ss_pred -------------hhhcceEEEecCCCCCceEEEEEEeC-CCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHH
Q 001960 547 -------------RQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 612 (991)
Q Consensus 547 -------------~~~~~il~~~pF~s~~k~msviv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~ 612 (991)
..+|+|+++|||+|+.|||+++|+.+ .+++..|.|||+.++-...+. -+++
T Consensus 523 d~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---------------NdWl 587 (1051)
T KOG0210|consen 523 DRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---------------NDWL 587 (1051)
T ss_pred ccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---------------chhh
Confidence 13799999999999999999999976 588999999998877554321 2457
Q ss_pred HHHHHHHHHcccceeeeeEEecCCCCCC--------------C---------CCCCCCCcEEEEEeeccCCCcccHHHHH
Q 001960 613 NETIEKFASEALRTLCLACMEIGNEFSA--------------D---------APIPTEGYTCIGIVGIKDPMRPGVKESV 669 (991)
Q Consensus 613 ~~~~~~~a~~glR~l~~A~~~l~~~~~~--------------~---------~~~~e~~l~~lG~~~i~D~lr~~v~~~I 669 (991)
++...+||.+|+||+.+|.|.++++..+ + +..+|+|+.++|++|+||+++++|+.++
T Consensus 588 eEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tL 667 (1051)
T KOG0210|consen 588 EEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTL 667 (1051)
T ss_pred hhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHH
Confidence 7788999999999999999999865100 0 1256899999999999999999999999
Q ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----------------------------eeeeCcccccC---CHH
Q 001960 670 AICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------------IAIEGPEFREK---SDE 718 (991)
Q Consensus 670 ~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----------------------------~vi~g~~~~~~---~~~ 718 (991)
+.||+|||++||+|||+.+||..||+..++...++ ++|+|+.+.-. -++
T Consensus 668 ElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~ 747 (1051)
T KOG0210|consen 668 ELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYED 747 (1051)
T ss_pred HHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHH
Confidence 99999999999999999999999999999986432 67888776543 245
Q ss_pred HHhhhcc--ccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHH--HHhhcCEEeccC
Q 001960 719 ELSKLIP--KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV--AKESADVIILDD 794 (991)
Q Consensus 719 ~~~~~~~--~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~--ak~~ad~vl~~~ 794 (991)
|+.++.+ ..+|+|||+|.||+++++.+|++.|+.|+++|||.||++|+++||+|| ||-|.|+ |.-+||+.+.+
T Consensus 748 Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi--GI~gkEGkQASLAADfSItq- 824 (1051)
T KOG0210|consen 748 EFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI--GIVGKEGKQASLAADFSITQ- 824 (1051)
T ss_pred HHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--eeecccccccchhccccHHH-
Confidence 5666553 456999999999999999999998999999999999999999999999 6667775 77889999988
Q ss_pred CchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH---HHHHHHHHhHHHHHHhccCC-CC
Q 001960 795 NFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQ---LLWVNMIMDTLGALALATEP-PN 869 (991)
Q Consensus 795 ~~~~i~~~-i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~q---ll~~nli~d~l~~lal~~e~-~~ 869 (991)
|..+.++ +-|||+.|+|..+.-||.+.+.++..+++.+++..+.+.|..-.| |..+..+++++|.+++..+. .+
T Consensus 825 -F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~ 903 (1051)
T KOG0210|consen 825 -FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVS 903 (1051)
T ss_pred -HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeeccccc
Confidence 9999998 467999999999999999999999999998888777776655544 56688899999999998743 44
Q ss_pred ccccccCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCcccchhHHHHHHHHHHHH-HHHHh
Q 001960 870 GDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQL-QRDGK 944 (991)
Q Consensus 870 ~~l~~~~P~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~-~n~~~ 944 (991)
+++-...|. -.+...++.+.+..|...++||+.++.+..+. +|.-+ .....++.|.++++-.+ +-++.
T Consensus 904 ~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~---l~~~e----f~~ivaisFtaLi~tELiMVaLt 976 (1051)
T KOG0210|consen 904 ESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALL---LFDTE----FIHIVAISFTALILTELIMVALT 976 (1051)
T ss_pred HHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHH---Hhhhh----heEeeeeeeHHHHHHHHHHHhhh
Confidence 444444442 12234455566666777899999987663221 11110 11234566666665433 23344
Q ss_pred hccccc
Q 001960 945 DKRLQG 950 (991)
Q Consensus 945 ~r~~~~ 950 (991)
.|+++.
T Consensus 977 v~tw~~ 982 (1051)
T KOG0210|consen 977 VRTWHW 982 (1051)
T ss_pred hhhhhH
Confidence 555543
No 24
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-82 Score=698.02 Aligned_cols=634 Identities=24% Similarity=0.387 Sum_probs=509.5
Q ss_pred hhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCC
Q 001960 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGW 196 (991)
Q Consensus 117 ~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~ 196 (991)
..+.++.+.+.|...-. ||+++| +++|++.||.|++.+++...|.+|+ .-|.+|.-|..-.+|++...+.-- .|.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E--~~eRlk~fG~NkleEkken~~lKFl-~Fm~~PlswVMEaAAimA~~Lang-~~~ 93 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDE--VEERLKIFGPNKLEEKKESKFLKFL-GFMWNPLSWVMEAAAIMAIGLANG-GGR 93 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHH--HHHHHHhhCchhhhhhhhhHHHHHH-HHHhchHHHHHHHHHHHHHHHhcC-CCC
Confidence 45678888887776654 999988 9999999999999887766666654 345677778878888877655421 244
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEE
Q 001960 197 PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLF 276 (991)
Q Consensus 197 ~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgil 276 (991)
+..|.|...|...+++...++.+.++..-.....|.+...+ +..|+|||+|.++.+.+||||||+.++.||+|||||+|
T Consensus 94 ~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~-KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRL 172 (942)
T KOG0205|consen 94 PPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAP-KAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARL 172 (942)
T ss_pred CcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCc-ccEEeecCeeeeeeccccccCceeeeccCCEecCccce
Confidence 66899988887777777777777787777777777765544 78999999999999999999999999999999999999
Q ss_pred EeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHH
Q 001960 277 VSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATI 356 (991)
Q Consensus 277 l~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~ 356 (991)
++|+-+.||+|.|||||.|+.|.+++. +||||.+.+|++.++|++||.+|..||-..++.. ......+|+-++.+.++
T Consensus 173 l~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~IGn~ 250 (942)
T KOG0205|consen 173 LEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTGIGNF 250 (942)
T ss_pred ecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHhhhhH
Confidence 999999999999999999999998887 9999999999999999999999999999998887 45558899999988876
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHH-cCCchHHHHHHHHHHHHHHHhccc
Q 001960 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPEGLPLAVTLSLAFAMKKMMNDK 435 (991)
Q Consensus 357 i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~-vP~~L~lav~~~l~~~~~~~~~~~ 435 (991)
+...+. +. .++.+...|.... ...+.....+.++++. +|.|||..++++++.+..+++++|
T Consensus 251 ci~si~-~g--~lie~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqg 312 (942)
T KOG0205|consen 251 CICSIA-LG--MLIEITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQG 312 (942)
T ss_pred HHHHHH-HH--HHHHHHhhhhhhh---------------hhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcc
Confidence 543221 11 1111222121110 1122233344555555 999999999999999999999999
Q ss_pred cccccchhhhccCCeEEEEeCccCccccCceEEEE--E-EEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCc
Q 001960 436 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK--A-CICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGE 512 (991)
Q Consensus 436 ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 512 (991)
+++++++|+|+|+.+|++|+|||||||.|+++|.+ + +.... .+++.. ++..+.+ +.
T Consensus 313 AItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g----------------v~~D~~-~L~A~rA----sr 371 (942)
T KOG0205|consen 313 AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG----------------VDKDDV-LLTAARA----SR 371 (942)
T ss_pred cHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC----------------CChHHH-HHHHHHH----hh
Confidence 99999999999999999999999999999999977 2 11111 111111 1111111 11
Q ss_pred eeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhcc
Q 001960 513 VVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 592 (991)
Q Consensus 513 ~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~ 592 (991)
. ...+.+|.|++....+ ..+.+..++.++..|||+..||....+..++|..+-.+|||||.|++.|.
T Consensus 372 ~---------en~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~ 438 (942)
T KOG0205|consen 372 K---------ENQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCN 438 (942)
T ss_pred h---------cChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhh
Confidence 1 1447889999977643 46778899999999999999999999999999999999999999999997
Q ss_pred ccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHH
Q 001960 593 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAIC 672 (991)
Q Consensus 593 ~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l 672 (991)
. +.+.++.+.+.+++||++|+|.+++|++..++... +.......++|+.-+-||+|.+..++|++.
T Consensus 439 ~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~~~gllp~fdpprhdsa~tirra 504 (942)
T KOG0205|consen 439 E-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWEFVGLLPLFDPPRHDSAETIRRA 504 (942)
T ss_pred c-----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcccccccccCCCCccchHHHHHHH
Confidence 3 23456778899999999999999999998775421 334456789999999999999999999999
Q ss_pred HHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCccc-ccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhc
Q 001960 673 RSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEF-REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 749 (991)
Q Consensus 673 ~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~-~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~ 749 (991)
...|++|.|+|||...-++..++.+|+-+. +..-+-|.+- ..+.....++.+.+..-||.+.|++|.++|+.||++
T Consensus 505 l~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r- 583 (942)
T KOG0205|consen 505 LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQER- 583 (942)
T ss_pred HhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhc-
Confidence 999999999999999999999999998642 0011111111 122233456666677789999999999999999999
Q ss_pred CCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 750 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 826 (991)
Q Consensus 750 g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~ 826 (991)
|+.++|+|||+||+|+||.||+|||+. .++|.|+.+||+|+....++.+..++..+|.+|.|++.+..|.+...+-
T Consensus 584 ~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitir 659 (942)
T KOG0205|consen 584 KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (942)
T ss_pred CceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHH
Confidence 999999999999999999999999998 9999999999999999999999999999999999999998887765554
No 25
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.2e-77 Score=729.93 Aligned_cols=639 Identities=20% Similarity=0.276 Sum_probs=474.0
Q ss_pred hccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhhhhhccCChHHHHhhCCHH
Q 001960 43 ANLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELGSIVEGHDIKKLKVHGGVE 122 (991)
Q Consensus 43 ~~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~v~ 122 (991)
..+....|+...+.+++..+++++.+.+..+.+++. .. ..+...++..||.+.+.+-....++++........-.-
T Consensus 65 ~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~---~~-~~I~~aI~~~Gy~a~~~~~~~~~~~~~~~~~~~~~~~~ 140 (741)
T PRK11033 65 PSCARKVENAVRQLAGVNQVQVLFATEKLVVDADND---IR-AQVESAVQKAGFSLRDEQAAAAAPESRLKSENLPLITL 140 (741)
T ss_pred HHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEeccc---ch-HHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHHH
Confidence 356666777777778888888998888877776433 11 34445567789987654211100110000000111000
Q ss_pred HHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHH--H-HHHH-HHHHHHHHhhhcccCCCC
Q 001960 123 GIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMT--L-MILA-VCALVSLVVGIATEGWPK 198 (991)
Q Consensus 123 ~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~--~-~ill-i~ai~s~~~~~~~~~~~~ 198 (991)
.....+..-. .++... . .+.. |.-- ....+.+|++..|+.++... . -.|+ ++++.+++++
T Consensus 141 ~~~~~~~~~~-~~~~~~---~-~~~~-~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~-------- 204 (741)
T PRK11033 141 AVMMAISWGL-EQFNHP---F-GQLA-FIAT--TLVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG-------- 204 (741)
T ss_pred HHHHHHHHHH-hhhhhH---H-HHHH-HHHH--HHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------
Confidence 1112221100 011110 0 1110 1000 01235688889999987532 1 1233 3444444433
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEe
Q 001960 199 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 199 ~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 278 (991)
.|.++..+++.+++--.+....+.+.++..++|.+ ..+..++|+|||++++|++++|+|||+|.|++||+|||||++++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 24454433322222222222222222222333333 45678999999999999999999999999999999999999999
Q ss_pred ecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHH
Q 001960 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (991)
Q Consensus 279 g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~ 358 (991)
|+ ..||||+|||||.|+.|..++. +|+||.+.+|.++++|+++|.+|.+|||.+++++++.+++|+|+.+|+++.+++
T Consensus 284 g~-~~vdes~lTGEs~Pv~k~~Gd~-V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~ 361 (741)
T PRK11033 284 PF-ASFDESALTGESIPVERATGEK-VPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYT 361 (741)
T ss_pred Cc-EEeecccccCCCCCEecCCCCe-eccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHH
Confidence 97 5999999999999999988765 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhcccccc
Q 001960 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (991)
Q Consensus 359 ~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilv 438 (991)
+++++++++++++|...+ +. .+...+..++++++++|||+|.+++|+++..++.++.|+|+++
T Consensus 362 ~~v~~~a~~~~~~~~~~~-------~~----------~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gili 424 (741)
T PRK11033 362 PAIMLVALLVILVPPLLF-------AA----------PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALI 424 (741)
T ss_pred HHHHHHHHHHHHHHHHHc-------cC----------CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEE
Confidence 999999999888763211 00 1335577889999999999999999999999999999999999
Q ss_pred ccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCC
Q 001960 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (991)
Q Consensus 439 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (991)
|+++++|+|+++|+||||||||||+|+|+|+++...+... .++.+.+. .. .+
T Consensus 425 k~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~~---------------~~~~l~~a---a~------~e---- 476 (741)
T PRK11033 425 KGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGIS---------------ESELLALA---AA------VE---- 476 (741)
T ss_pred cCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCCC---------------HHHHHHHH---HH------Hh----
Confidence 9999999999999999999999999999999886533210 11222221 11 11
Q ss_pred CceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEE---EEEEeCCCeEEEEEcCchHHHHHhccccc
Q 001960 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMG---VVIELPEGGFRVHCKGASEIILAACDKFL 595 (991)
Q Consensus 519 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~ms---viv~~~~~~~~~~~KGa~e~il~~c~~~~ 595 (991)
..+.||.++|+++++.+.+.+ +||.++++.+. +....++..+ .-|+++.+.+
T Consensus 477 ---~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~~---~ig~~~~~~~------ 531 (741)
T PRK11033 477 ---QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGERV---LICAPGKLPP------ 531 (741)
T ss_pred ---cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEEE---EEecchhhhh------
Confidence 126799999999998776543 46777776652 2222333322 2377766532
Q ss_pred cCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHC
Q 001960 596 NSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 675 (991)
Q Consensus 596 ~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~a 675 (991)
++ +.+.+.++++..+|.|++++|+ |.+++|+++++|++|||++++|++|+++
T Consensus 532 --------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~ 583 (741)
T PRK11033 532 --------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIALQDTLRADARQAISELKAL 583 (741)
T ss_pred --------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEEecCCchhHHHHHHHHHHC
Confidence 11 2244556788999999999984 4689999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEE
Q 001960 676 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 755 (991)
Q Consensus 676 Gi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~ 755 (991)
|++++|+|||+..+|.++|+++||. .+++.+|+||..+|+.+|+. +.|+|
T Consensus 584 gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~K~~~v~~l~~~--~~v~m 633 (741)
T PRK11033 584 GIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPEDKVKAVTELNQH--APLAM 633 (741)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHHHHHHHHHHhcC--CCEEE
Confidence 9999999999999999999999995 56789999999999999954 57999
Q ss_pred eCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 756 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (991)
Q Consensus 756 iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~ 833 (991)
+|||.||+|||++|||||+|| +|++.++++||+++.++++..+.+++++||++++||++|+.|++.||+++++++++
T Consensus 634 vGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 634 VGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLL 710 (741)
T ss_pred EECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 89999999999999999999999999999999999999999999999998888764
No 26
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-79 Score=704.77 Aligned_cols=662 Identities=22% Similarity=0.305 Sum_probs=505.1
Q ss_pred chhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcccChhhhh-hhhc-----cCC----hH-H
Q 001960 46 SKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQICPDELG-SIVE-----GHD----IK-K 114 (991)
Q Consensus 46 ~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~-----~~~----~~-~ 114 (991)
....|+...+.++++.++|...+.++.+.+++. ...+.++.+.+++.||...-.... ...+ ..+ .+ .
T Consensus 161 ~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~--~~~pr~i~k~ie~~~~~~~~~~~~~~~~~~~l~~~~ei~~w~~~f 238 (951)
T KOG0207|consen 161 VSKIESILERLRGVKSFSVSLATDTAIVVYDPE--ITGPRDIIKAIEETGFEASVRPYGDTTFKNSLKHKEEIRKWKRPF 238 (951)
T ss_pred hhhhHHHHhhccCeeEEEEeccCCceEEEeccc--ccChHHHHHHHHhhcccceeeeccccchhhhhhhhhHHHhcchHH
Confidence 345577788899999999999999999888776 566778888888888865433211 1111 000 11 1
Q ss_pred HHhhCCHHHH---HH----------HhCCCcCCCCChhHHHHHHHHHhcCCCcCCC----CCCccHHHHHHHHHhhHHHH
Q 001960 115 LKVHGGVEGI---AE----------KLSTSITDGISTSEHLLNRRKEIYGINKFTE----SPARGFWVYVWEALHDMTLM 177 (991)
Q Consensus 115 l~~~~~v~~~---~~----------~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~----~~~~~f~~~~~~~~~~~~~~ 177 (991)
+...+ .... +. .+......|++-.. .. .+.+.. ..+++|+.-.|+++++....
T Consensus 239 l~s~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l-------~~~L~~~vqf~~G~~fy~~A~ksL~~g~~n 308 (951)
T KOG0207|consen 239 LISLG-FSLPVSFAMIICPPLAWILALLVPFLPGLSYGN--SL-------SFVLATPVQFVGGRPFYLAAYKSLKRGSAN 308 (951)
T ss_pred HHHHH-HHHHHHHHHHHhccchhhhhhhccccccchhhh--HH-------HhhhheeeEEecceeeHHHHHHHHhcCCCC
Confidence 11111 1111 11 11113334444332 11 122222 25789999999999877544
Q ss_pred H--HH-HHHHHHHHhhhcc------cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------hcCCcEEEE
Q 001960 178 I--LA-VCALVSLVVGIAT------EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR------EKKKITVQV 242 (991)
Q Consensus 178 i--ll-i~ai~s~~~~~~~------~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~------~~~~~~v~V 242 (991)
| |+ +.+..++++.+.. ...+..+||...|++.++. +++|.|.++..+..+ .+.+.++.+
T Consensus 309 MdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~------lgr~LE~~Ak~kts~alskLmsl~p~~a~i 382 (951)
T KOG0207|consen 309 MDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFIT------LGRWLESLAKGKTSEALSKLMSLAPSKATI 382 (951)
T ss_pred ceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHH------HHHHHHHHhhccchHHHHHHhhcCcccceE
Confidence 3 21 1222222222211 1225567787666555444 489999988776443 346778999
Q ss_pred EeCCe-EEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEE
Q 001960 243 ARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVT 321 (991)
Q Consensus 243 ~R~G~-~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~ 321 (991)
+.+|+ .++|+.+.|.+||+|.+.||++||+||++++|++ +||||.+|||+.||.|..+++ +.+||.+.+|...+.+|
T Consensus 383 i~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss-~VDEs~iTGEs~PV~Kk~gs~-ViaGsiN~nG~l~VkaT 460 (951)
T KOG0207|consen 383 IEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSS-EVDESLITGESMPVPKKKGST-VIAGSINLNGTLLVKAT 460 (951)
T ss_pred eecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCce-eechhhccCCceecccCCCCe-eeeeeecCCceEEEEEE
Confidence 99886 8999999999999999999999999999999985 999999999999999988776 99999999999999999
Q ss_pred EEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHH
Q 001960 322 TVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 401 (991)
Q Consensus 322 ~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (991)
.+|.+|.+++|.+++++++..++|+|+.+|+++.+++++++++++.++++|.+...+.... ...| ...+...|
T Consensus 461 ~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~---~~~~----~~~~~~a~ 533 (951)
T KOG0207|consen 461 KVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKY---PRSF----FDAFSHAF 533 (951)
T ss_pred eccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccC---cchh----hHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987543321111 1111 13567788
Q ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeec
Q 001960 402 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD 481 (991)
Q Consensus 402 ~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~ 481 (991)
..++++++++|||+|.|++|++...+....+++|+|+|..+++|.+.++++|.||||||||+|+++|+++....+.
T Consensus 534 ~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---- 609 (951)
T KOG0207|consen 534 QLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---- 609 (951)
T ss_pred HhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc----
Confidence 8999999999999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCCCCCCCCCh-hHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCC
Q 001960 482 NSKGTPAFGSSIPA-SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNS 560 (991)
Q Consensus 482 ~~~~~~~~~~~~~~-~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s 560 (991)
++. +.+.+. +..+ .-+.||..+|+++||++.... .....++....|..
T Consensus 610 -----------~~~~e~l~~v---------~a~E-------s~SeHPig~AIv~yak~~~~~----~~~~~~~~~~~~pg 658 (951)
T KOG0207|consen 610 -----------ISLKEALALV---------AAME-------SGSEHPIGKAIVDYAKEKLVE----PNPEGVLSFEYFPG 658 (951)
T ss_pred -----------ccHHHHHHHH---------HHHh-------cCCcCchHHHHHHHHHhcccc----cCccccceeecccC
Confidence 011 122211 1111 127799999999999877611 11112223333333
Q ss_pred CCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCC
Q 001960 561 VKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA 640 (991)
Q Consensus 561 ~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~ 640 (991)
+.+. +-+...+.. .+-|.-+.+.. +|...+ +.+++.+++....|..+.+++
T Consensus 659 ~g~~--~~~~~~~~~---i~iGN~~~~~r--------~~~~~~------~~i~~~~~~~e~~g~tvv~v~---------- 709 (951)
T KOG0207|consen 659 EGIY--VTVTVDGNE---VLIGNKEWMSR--------NGCSIP------DDILDALTESERKGQTVVYVA---------- 709 (951)
T ss_pred CCcc--cceEEeeeE---EeechHHHHHh--------cCCCCc------hhHHHhhhhHhhcCceEEEEE----------
Confidence 3322 222222222 23366554432 332222 236677777788898888887
Q ss_pred CCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHH
Q 001960 641 DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEEL 720 (991)
Q Consensus 641 ~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~ 720 (991)
-|.++.|+++++|++|||+..+|+.||+.|+++.|+||||..+|+++|+++|+..
T Consensus 710 ------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~------------------- 764 (951)
T KOG0207|consen 710 ------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN------------------- 764 (951)
T ss_pred ------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-------------------
Confidence 4678999999999999999999999999999999999999999999999999754
Q ss_pred hhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 721 SKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 721 ~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
|+|...|+||.+.|+.+|++ ++.|+|+|||+||+|||.+|||||+|| .|+++|.++||+|++.+|+..++
T Consensus 765 --------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~ 834 (951)
T KOG0207|consen 765 --------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVP 834 (951)
T ss_pred --------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhH
Confidence 99999999999999999999 999999999999999999999999999 88999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 801 TVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833 (991)
Q Consensus 801 ~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~ 833 (991)
.+++.+|++..||+.|+.|+++||++.++++..
T Consensus 835 ~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag 867 (951)
T KOG0207|consen 835 FAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG 867 (951)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee
Confidence 999999999999999999999999999998764
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=1.4e-76 Score=702.28 Aligned_cols=491 Identities=40% Similarity=0.603 Sum_probs=428.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-hcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEeccc
Q 001960 210 ILLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 288 (991)
Q Consensus 210 lllvi~v~~~~~~~~~~~~~~l~~-~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~ 288 (991)
+++..++....+++.++..+++.+ ..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||+
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes~ 83 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDESN 83 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEccc
Confidence 445556666677777777777765 3677899999999 999999999999999999999999999999995 7999999
Q ss_pred CCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHH-HHHHHHHHHHHHH
Q 001960 289 LTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAVV 367 (991)
Q Consensus 289 LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~-~~i~~~~l~~ai~ 367 (991)
|||||.|+.|.+++. +++||.+.+|++++.|+.+|.+|..+++...+.++...++|++++.++++ .++.++.++++++
T Consensus 84 LTGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~ 162 (499)
T TIGR01494 84 LTGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALA 162 (499)
T ss_pred ccCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987765 99999999999999999999999999999999888877899999999999 7888877777777
Q ss_pred HHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhcc
Q 001960 368 TFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETM 447 (991)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~l 447 (991)
++++|...+. ... .+...+..++++++++|||+||+++++++..+..+|.++|+++|+++++|+|
T Consensus 163 ~~~~~~~~~~------------~~~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l 227 (499)
T TIGR01494 163 VFLFWAIGLW------------DPN---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEEL 227 (499)
T ss_pred HHHHHHHHHc------------ccc---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhc
Confidence 7766543211 000 2456788999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCCh
Q 001960 448 GSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTP 527 (991)
Q Consensus 448 g~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p 527 (991)
|+++++|||||||||+|+|++++++..+. .+.++||
T Consensus 228 ~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~hp 263 (499)
T TIGR01494 228 GKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGHP 263 (499)
T ss_pred cCCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCCh
Confidence 99999999999999999999998865321 0127799
Q ss_pred hhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHH
Q 001960 528 TETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEA 607 (991)
Q Consensus 528 ~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~ 607 (991)
.|.|+++++...+ ++..||++.+|+|+++++.+++ .++||+++.+++.|..
T Consensus 264 ~~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-------------- 314 (499)
T TIGR01494 264 DERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-------------- 314 (499)
T ss_pred HHHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH--------------
Confidence 9999999886421 2568999999999999886433 3689999999998852
Q ss_pred HHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCH
Q 001960 608 AVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 687 (991)
Q Consensus 608 ~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~ 687 (991)
+.+..++++.+|+|++++|++ .+++|+++++|++|++++++|+.|+++|++++|+|||+.
T Consensus 315 ----~~~~~~~~~~~g~~~~~~a~~----------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~ 374 (499)
T TIGR01494 315 ----LEEKVKELAQSGLRVLAVASK----------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNV 374 (499)
T ss_pred ----HHHHHHHHHhCCCEEEEEEEC----------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 123345678899999999964 268999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhh
Q 001960 688 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (991)
Q Consensus 688 ~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~ 767 (991)
.+|..+|+++|| +++++|+||.++|+.+|++ |+.|+|+|||.||+|||+
T Consensus 375 ~~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al~ 423 (499)
T TIGR01494 375 LTAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPALK 423 (499)
T ss_pred HHHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHHH
Confidence 999999999986 4889999999999999988 999999999999999999
Q ss_pred hCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHH
Q 001960 768 EADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQ 847 (991)
Q Consensus 768 ~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~q 847 (991)
+|||||+|| |+++||++++++++..+..++++||++++++++++.|.+++|++.+++++++.+
T Consensus 424 ~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~~~----------- 486 (499)
T TIGR01494 424 KADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALLAV----------- 486 (499)
T ss_pred hCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 999999997 689999999999999999999999999999999999999999998888876431
Q ss_pred HHHHHHHHhHHHHHH
Q 001960 848 LLWVNMIMDTLGALA 862 (991)
Q Consensus 848 ll~~nli~d~l~~la 862 (991)
+|+++++.++++
T Consensus 487 ---~~~~~~~~~~~~ 498 (499)
T TIGR01494 487 ---LNLVPPGLAALA 498 (499)
T ss_pred ---HHHHhcchhhhc
Confidence 888888877654
No 28
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=4.5e-74 Score=684.58 Aligned_cols=529 Identities=27% Similarity=0.394 Sum_probs=419.2
Q ss_pred CccHHHHHHHHHhhHHHHH--HHHHHH-HHHHhhh---ccc-----CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH-
Q 001960 160 ARGFWVYVWEALHDMTLMI--LAVCAL-VSLVVGI---ATE-----GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ- 227 (991)
Q Consensus 160 ~~~f~~~~~~~~~~~~~~i--lli~ai-~s~~~~~---~~~-----~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~- 227 (991)
+.+|++..|+.++.....+ ++..++ .+++++. ... +..++||++.++++.++++ .+|.+++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------g~~le~~~~ 75 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILL------GRWLEMLAK 75 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHH------HHHHHHHHH
Confidence 4678888898887543222 222222 2222221 111 1235688887765544433 34444332
Q ss_pred ------HHHhhhhcCCcEEEEEeC-CeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccC
Q 001960 228 ------FKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA 300 (991)
Q Consensus 228 ------~~~l~~~~~~~~v~V~R~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~ 300 (991)
.++|.+ ..+..++|+|+ |++++|++++|+|||+|.|++||+|||||++++|+ +.||||+|||||.|+.|..
T Consensus 76 ~~a~~~~~~L~~-~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~-~~vdes~lTGEs~pv~k~~ 153 (562)
T TIGR01511 76 GRASDALSKLAK-LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGE-SEVDESLVTGESLPVPKKV 153 (562)
T ss_pred HHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECc-eEEehHhhcCCCCcEEcCC
Confidence 223333 45668888885 67799999999999999999999999999999998 4999999999999999988
Q ss_pred CCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 001960 301 LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRK 380 (991)
Q Consensus 301 ~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~ 380 (991)
++. +|+||.+.+|+++++|+++|.+|.+|+|.+++.+++.+++|+|+..++++.++.+++++++++++++|.
T Consensus 154 gd~-V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------- 225 (562)
T TIGR01511 154 GDP-VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------- 225 (562)
T ss_pred CCE-EEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 775 999999999999999999999999999999999999999999999999999999998888887776542
Q ss_pred ccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCc
Q 001960 381 LQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGT 460 (991)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGT 460 (991)
..+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+|+++|+||||||||
T Consensus 226 ------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGT 287 (562)
T TIGR01511 226 ------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGT 287 (562)
T ss_pred ------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCC
Confidence 24667899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcC
Q 001960 461 LTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG 540 (991)
Q Consensus 461 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g 540 (991)
||+|+|++.++...+... .++.+.+. .. .+ ..+.||.++|+++++.+.+
T Consensus 288 LT~g~~~v~~i~~~~~~~---------------~~~~l~~a---a~------~e-------~~s~HPia~Ai~~~~~~~~ 336 (562)
T TIGR01511 288 LTQGKPTVTDVHVFGDRD---------------RTELLALA---AA------LE-------AGSEHPLAKAIVSYAKEKG 336 (562)
T ss_pred CcCCCEEEEEEecCCCCC---------------HHHHHHHH---HH------Hh-------ccCCChHHHHHHHHHHhcC
Confidence 999999999876432210 11222221 11 11 1266999999999998766
Q ss_pred CChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHH
Q 001960 541 GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFA 620 (991)
Q Consensus 541 ~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a 620 (991)
.+... ..-.+.+| . .++....++.. +..|+++.+.+ ++. .++ ++.
T Consensus 337 ~~~~~----~~~~~~~~----g--~Gi~~~~~g~~---~~iG~~~~~~~--------~~~--~~~------------~~~ 381 (562)
T TIGR01511 337 ITLVE----VSDFKAIP----G--IGVEGTVEGTK---IQLGNEKLLGE--------NAI--KID------------GKA 381 (562)
T ss_pred CCcCC----CCCeEEEC----C--ceEEEEECCEE---EEEECHHHHHh--------CCC--CCC------------hhh
Confidence 54211 00011111 1 12222222222 23466665422 111 111 134
Q ss_pred HcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 621 SEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 621 ~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
++|.+++.++ .|.+++|++.++|++|||++++|++|++.|++++|+|||+..++.++++++||.
T Consensus 382 ~~g~~~~~~~----------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~ 445 (562)
T TIGR01511 382 EQGSTSVLVA----------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN 445 (562)
T ss_pred hCCCEEEEEE----------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc
Confidence 6788887775 467899999999999999999999999999999999999999999999999993
Q ss_pred cCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCc
Q 001960 701 TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 780 (991)
Q Consensus 701 ~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~ 780 (991)
++++..|++|.++++.++++ ++.|+|+|||.||+||+++||+||+|| .|+
T Consensus 446 ----------------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~ 495 (562)
T TIGR01511 446 ----------------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGT 495 (562)
T ss_pred ----------------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcC
Confidence 77888999999999999988 899999999999999999999999999 899
Q ss_pred HHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 781 EVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (991)
Q Consensus 781 ~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~ 834 (991)
+.+++.||++++++++..+.+++++||+++++|++|+.|++.||++.+++++.+
T Consensus 496 ~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~ 549 (562)
T TIGR01511 496 DVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGV 549 (562)
T ss_pred HHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999998887743
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.9e-74 Score=686.73 Aligned_cols=511 Identities=28% Similarity=0.385 Sum_probs=420.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCC-eEEEeecCCcccCcEEEeCCCCeecccEEEEe
Q 001960 200 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 200 ~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G-~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~ 278 (991)
|.++..+++.+++.-++....+++.++..+++.+ .++..++|+||| ++++|+++||+|||+|.+++||+|||||++++
T Consensus 18 ~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 18 VLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 5556555544444444444444444444445543 456689999995 99999999999999999999999999999999
Q ss_pred ecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHH
Q 001960 279 GFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 358 (991)
Q Consensus 279 g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~ 358 (991)
|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|++|++.+.+.++..+++|+|+.+++++.++.
T Consensus 97 g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~ 174 (556)
T TIGR01525 97 GE-SEVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYV 174 (556)
T ss_pred cc-eEEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHH
Confidence 97 599999999999999998766 5999999999999999999999999999999999888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhcccccc
Q 001960 359 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALV 438 (991)
Q Consensus 359 ~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilv 438 (991)
+++++++++++++|.... . . ..+..++++++++|||+||+++|++++.++++|.++|+++
T Consensus 175 ~~~l~~a~~~~~~~~~~~---------------~---~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilv 234 (556)
T TIGR01525 175 PAVLAIALLTFVVWLALG---------------A---L--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILI 234 (556)
T ss_pred HHHHHHHHHHHHHHHHhc---------------c---c--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCcee
Confidence 999998888887764210 0 0 4577889999999999999999999999999999999999
Q ss_pred ccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCC
Q 001960 439 RHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEG 518 (991)
Q Consensus 439 r~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 518 (991)
|+++++|+||++|++|||||||||+|+|+|.++...+... ...++.++.. .. .+
T Consensus 235 k~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~~~~~~l~~a---~~------~e---- 288 (556)
T TIGR01525 235 KGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------ISEEELLALA---AA------LE---- 288 (556)
T ss_pred cCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------ccHHHHHHHH---HH------Hh----
Confidence 9999999999999999999999999999999887543210 0011222211 11 11
Q ss_pred CceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCC
Q 001960 519 NKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSN 598 (991)
Q Consensus 519 ~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~ 598 (991)
..+.||+++|+++++.+.+.+... +| + ....++.++..++||+++..+..|+.. ..+
T Consensus 289 ---~~~~hp~~~Ai~~~~~~~~~~~~~-----------~~--~------~~~~~~~gi~~~~~g~~~~~lg~~~~~-~~~ 345 (556)
T TIGR01525 289 ---QSSSHPLARAIVRYAKKRGLELPK-----------QE--D------VEEVPGKGVEATVDGQEEVRIGNPRLL-ELA 345 (556)
T ss_pred ---ccCCChHHHHHHHHHHhcCCCccc-----------cc--C------eeEecCCeEEEEECCeeEEEEecHHHH-hhc
Confidence 126799999999999877654221 11 0 012234556666777666666666532 111
Q ss_pred CeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCC-C
Q 001960 599 GEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG-I 677 (991)
Q Consensus 599 g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aG-i 677 (991)
+.. ....++.++.++.+|+|++.++. |.+++|.+.++|++|||++++|+.|+++| +
T Consensus 346 ~~~-------~~~~~~~~~~~~~~g~~~~~v~~----------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i 402 (556)
T TIGR01525 346 AEP-------ISASPDLLNEGESQGKTVVFVAV----------------DGELLGVIALRDQLRPEAKEAIAALKRAGGI 402 (556)
T ss_pred CCC-------chhhHHHHHHHhhCCcEEEEEEE----------------CCEEEEEEEecccchHhHHHHHHHHHHcCCC
Confidence 111 11123456678899999998873 46899999999999999999999999999 9
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeC
Q 001960 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 757 (991)
Q Consensus 678 ~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iG 757 (991)
+++|+|||+..++.++++++|+.. +|++..|++|.++++.+++. ++.|+|+|
T Consensus 403 ~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vG 454 (556)
T TIGR01525 403 KLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVG 454 (556)
T ss_pred eEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEE
Confidence 999999999999999999999953 88999999999999999988 89999999
Q ss_pred CCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 834 (991)
Q Consensus 758 DG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~ 834 (991)
||.||++|+++||+|++|| ++++.+++.||+++.++++..+.+++++||+++.||++++.|++.||++.+++++.+
T Consensus 455 Dg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g 530 (556)
T TIGR01525 455 DGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGG 530 (556)
T ss_pred CChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 899999999999999999999999999999999999999999999999998887754
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=5.6e-73 Score=706.76 Aligned_cols=544 Identities=24% Similarity=0.342 Sum_probs=434.0
Q ss_pred CCccHHHHHHHHHhhHHHHH--HHHHHH-HHHHhhh----c----ccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 159 PARGFWVYVWEALHDMTLMI--LAVCAL-VSLVVGI----A----TEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ 227 (991)
Q Consensus 159 ~~~~f~~~~~~~~~~~~~~i--lli~ai-~s~~~~~----~----~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~ 227 (991)
.+++|++..|+++++....+ |+.+++ .++++++ . ..+..+.|||..++++.+++ +++|.|++.
T Consensus 233 ~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~g~~le~~~ 306 (834)
T PRK10671 233 AGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLIN------LGHMLEARA 306 (834)
T ss_pred hhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHH------HHHHHHHHH
Confidence 46688888888887543222 222222 3333221 1 11112347787655544333 356666555
Q ss_pred HHH----hhh--hcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCC
Q 001960 228 FKD----LDR--EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL 301 (991)
Q Consensus 228 ~~~----l~~--~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~ 301 (991)
.++ +.+ ...+..++|+|||++++|+.++|+|||+|.|++||+|||||++++|+ ..||||+|||||.|+.|..+
T Consensus 307 ~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~vdeS~lTGEs~pv~k~~g 385 (834)
T PRK10671 307 RQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AWLDEAMLTGEPIPQQKGEG 385 (834)
T ss_pred HHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EEEeehhhcCCCCCEecCCC
Confidence 443 222 24567899999999999999999999999999999999999999996 59999999999999999887
Q ss_pred CCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q 001960 302 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKL 381 (991)
Q Consensus 302 ~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~ 381 (991)
+ .+|+||.+.+|.++++|+++|.+|.+|+|.+++++++..++|+|+..++++.++.+++++++++++++|...
T Consensus 386 d-~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~------ 458 (834)
T PRK10671 386 D-SVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF------ 458 (834)
T ss_pred C-EEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------
Confidence 6 499999999999999999999999999999999998888999999999999999999998888888776421
Q ss_pred cCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCcc
Q 001960 382 QEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTL 461 (991)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTL 461 (991)
+. ...+...+..++++++++|||+|++++|+++..++.+++++|+++|+++++|+|+++|++||||||||
T Consensus 459 --~~--------~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTL 528 (834)
T PRK10671 459 --GP--------APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTL 528 (834)
T ss_pred --CC--------chHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCcc
Confidence 00 01244567789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCC
Q 001960 462 TTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGG 541 (991)
Q Consensus 462 T~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~ 541 (991)
|+|+|+|.++...+.. ++ .+++..+...++ .+.||.++|+++++.....
T Consensus 529 T~g~~~v~~~~~~~~~----------------~~--~~~l~~a~~~e~-------------~s~hp~a~Ai~~~~~~~~~ 577 (834)
T PRK10671 529 TEGKPQVVAVKTFNGV----------------DE--AQALRLAAALEQ-------------GSSHPLARAILDKAGDMTL 577 (834)
T ss_pred ccCceEEEEEEccCCC----------------CH--HHHHHHHHHHhC-------------CCCCHHHHHHHHHHhhCCC
Confidence 9999999887643221 01 122222222221 1679999999998763321
Q ss_pred ChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHH
Q 001960 542 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFAS 621 (991)
Q Consensus 542 ~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~ 621 (991)
. ...+|..... .++....+ +. .+++|+++.+.+.. +. .+.+.+.++++++
T Consensus 578 ~-----------~~~~~~~~~g-~Gv~~~~~-g~--~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~ 627 (834)
T PRK10671 578 P-----------QVNGFRTLRG-LGVSGEAE-GH--ALLLGNQALLNEQQ------------VD---TKALEAEITAQAS 627 (834)
T ss_pred C-----------CcccceEecc-eEEEEEEC-CE--EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHh
Confidence 1 1122322221 22222222 22 24569988764311 11 1235566777889
Q ss_pred cccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001960 622 EALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (991)
Q Consensus 622 ~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 701 (991)
+|.+++.+++ |..++|.++++|++||+++++|++|++.|+++.|+|||+..++.++++++||..
T Consensus 628 ~g~~~v~va~----------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~ 691 (834)
T PRK10671 628 QGATPVLLAV----------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE 691 (834)
T ss_pred CCCeEEEEEE----------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE
Confidence 9999998884 457899999999999999999999999999999999999999999999999964
Q ss_pred CCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcH
Q 001960 702 DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 781 (991)
Q Consensus 702 ~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~ 781 (991)
++++..|++|.++++.++.+ ++.|+|+|||.||+||+++||+||+|| +|++
T Consensus 692 ---------------------------~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~ 742 (834)
T PRK10671 692 ---------------------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSD 742 (834)
T ss_pred ---------------------------EEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCH
Confidence 88999999999999999988 999999999999999999999999999 8999
Q ss_pred HHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 782 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 832 (991)
Q Consensus 782 ~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~ 832 (991)
.++++||++++++++..|.+++++||+++.+|++|+.|++.||++++++++
T Consensus 743 ~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 743 VAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998776
No 31
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.3e-72 Score=670.07 Aligned_cols=502 Identities=27% Similarity=0.348 Sum_probs=410.5
Q ss_pred HHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCccc
Q 001960 179 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLP 258 (991)
Q Consensus 179 lli~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvv 258 (991)
+.++++++++.+ .|+|+..+++.+++..++....+++.++..+++.+ .++.+++|+|||++++|++++|+|
T Consensus 5 ~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 5 MALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHCCC
Confidence 445555666554 47888666555555444444444444444555544 456789999999999999999999
Q ss_pred CcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcC
Q 001960 259 GDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 338 (991)
Q Consensus 259 GDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~ 338 (991)
||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+||.+.+|+++++|++||.+|.+|++.+.+.+
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~ 153 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEE 153 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHHHH
Confidence 9999999999999999999997 599999999999999998766 59999999999999999999999999999999998
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHH
Q 001960 339 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 418 (991)
Q Consensus 339 ~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~l 418 (991)
++.+++|+|+.+++++.++.++.+.+++++++++.. .. . +...+..++++++++|||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------~----~~~~~~~~~svlv~~~P~aL~l 214 (536)
T TIGR01512 154 AQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LK------------R----WPFWVYRALVLLVVASPCALVI 214 (536)
T ss_pred HhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc------------c----cHHHHHHHHHHHhhcCcccccc
Confidence 888889999999999999999988888777665431 00 0 0125777899999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHH
Q 001960 419 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASAS 498 (991)
Q Consensus 419 av~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (991)
++|+++..++.+|.++|+++|+++++|++|++|++|||||||||+|+|++.++... +.+
T Consensus 215 a~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------~~l 273 (536)
T TIGR01512 215 SAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------EVL 273 (536)
T ss_pred chHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------------HHH
Confidence 99999999999999999999999999999999999999999999999999876421 122
Q ss_pred HHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHHHcCCChHHHhhhcceEEEecCCCCCce--EEEEEEeCCCeE
Q 001960 499 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ--MGVVIELPEGGF 576 (991)
Q Consensus 499 ~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~~~g~~~~~~~~~~~il~~~pF~s~~k~--msviv~~~~~~~ 576 (991)
+.. ... + ..+.||.++|+++++.+.+ ||++.+.. .++.....+..+
T Consensus 274 ~~a---~~~------e-------~~~~hp~~~Ai~~~~~~~~----------------~~~~~~~~~g~gi~~~~~g~~~ 321 (536)
T TIGR01512 274 RLA---AAA------E-------QASSHPLARAIVDYARKRE----------------NVESVEEVPGEGVRAVVDGGEV 321 (536)
T ss_pred HHH---HHH------h-------ccCCCcHHHHHHHHHHhcC----------------CCcceEEecCCeEEEEECCeEE
Confidence 221 111 1 1267999999999987653 22222211 122222222222
Q ss_pred EEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEee
Q 001960 577 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 656 (991)
Q Consensus 577 ~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~ 656 (991)
..|+++.+.+. + ...+..+|.+++.++ .|..++|.+.
T Consensus 322 ---~ig~~~~~~~~--------~----------------~~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 322 ---RIGNPRSLEAA--------V----------------GARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred ---EEcCHHHHhhc--------C----------------CcchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 23665543221 1 013455676766554 4678999999
Q ss_pred ccCCCcccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 657 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
++|++|||++++|++|+++|+ ++.|+|||+..++..+++++|+.. ++++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999964 7889999
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k 815 (991)
++|..+++.++++ ++.|+|+|||.||++|+++||+|++||.++++.++++||+++.++++..+.+++.+||+++++|++
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 490 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ 490 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 899999999999999999999999999668999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 001960 816 FVQFQLTVNVVALIVNFSS 834 (991)
Q Consensus 816 ~i~~~l~~n~~~i~~~~~~ 834 (991)
|+.|++.||++++++++++
T Consensus 491 nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 491 NVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999888754
No 32
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-73 Score=637.05 Aligned_cols=741 Identities=23% Similarity=0.301 Sum_probs=531.8
Q ss_pred CCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhcccCCCCCcchhHHHHHHHHHH
Q 001960 134 DGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV 213 (991)
Q Consensus 134 ~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~~~~~~~~~~~~d~~~i~~~lllv 213 (991)
.|.. ++.++..-.++||.|.+..+ .++|-+++.|.-..|++.+..+|..+.+. + +.||.+. +.++++
T Consensus 161 ~G~~-~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWCL----D----eyWYySl---FtLfMl 227 (1160)
T KOG0209|consen 161 TGHE-EESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWCL----D----EYWYYSL---FTLFML 227 (1160)
T ss_pred cCcc-hHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHHh----H----HHHHHHH---HHHHHH
Confidence 5776 44457777778999999654 56799999999888887777666665443 2 2577654 334455
Q ss_pred HHHHHHHHHHHHHHHHHhhhh-cCCcEEEEEeCCeEEEeecCCcccCcEEEeCC---CCeecccEEEEeecceEEecccC
Q 001960 214 VFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCM---GDQVPADGLFVSGFSVLINESSL 289 (991)
Q Consensus 214 i~v~~~~~~~~~~~~~~l~~~-~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~---Gd~VPaDgill~g~~l~VDeS~L 289 (991)
+.+.+.--+++.+......+. ..+..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|+.|+ |.|||++|
T Consensus 228 i~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs-ciVnEaML 306 (1160)
T KOG0209|consen 228 IAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS-CIVNEAML 306 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc-eeechhhh
Confidence 555555555666666666553 35668999999999999999999999999987 56899999999996 89999999
Q ss_pred CCCCcceecc----------------CCCCeEEeccEEe-------------cCeEEEEEEEEeccchhhHHHhhhcCCC
Q 001960 290 TGESEPVNVN----------------ALNPFLLSGTKVQ-------------NGSCKMLVTTVGMRTQWGKLMATLSEGG 340 (991)
Q Consensus 290 TGES~pv~k~----------------~~~~~l~sGt~v~-------------~g~~~~~V~~~G~~T~~g~i~~~~~~~~ 340 (991)
||||.|..|. .+..++|.||+++ ||.+.+.|++||.+|..|++++.+.-..
T Consensus 307 tGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~a 386 (1160)
T KOG0209|consen 307 TGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSA 386 (1160)
T ss_pred cCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecc
Confidence 9999999884 1345799999997 6789999999999999999999887755
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHH
Q 001960 341 DDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAV 420 (991)
Q Consensus 341 ~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav 420 (991)
++-|.- |+-+.++ ++.+++|.+....|.+..-.... ..+=.+.|.-++.|+...+|.-||+-+
T Consensus 387 ervTaN----n~Etf~F-----ILFLlVFAiaAa~Yvwv~Gskd~--------~RsrYKL~LeC~LIlTSVvPpELPmEL 449 (1160)
T KOG0209|consen 387 ERVTAN----NRETFIF-----ILFLLVFAIAAAGYVWVEGSKDP--------TRSRYKLFLECTLILTSVVPPELPMEL 449 (1160)
T ss_pred eeeeec----cHHHHHH-----HHHHHHHHHHhhheEEEecccCc--------chhhhheeeeeeEEEeccCCCCCchhh
Confidence 543332 1222222 22333444433333332211110 012224455566677788999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhccCCeEEEEeCccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHH
Q 001960 421 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKL 500 (991)
Q Consensus 421 ~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (991)
+++.-.+...+.|.++.|..+-.+.-.|++|.-|||||||||+..|.|..+...... .......++.+.+...
T Consensus 450 SmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~------~~~~~~~s~~p~~t~~- 522 (1160)
T KOG0209|consen 450 SMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD------EGALTPASKAPNETVL- 522 (1160)
T ss_pred hHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC------cccccchhhCCchHHH-
Confidence 999999999999999999999999999999999999999999999999887542211 0011112223333333
Q ss_pred HHHHHHhcCCCceeecCCCceeecCChhhHHHHHHHH-Hc--CC-Ch--HHHhhhcceEEEecCCCCCceEEEEEEeCC-
Q 001960 501 LLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGL-LL--GG-DF--QAERQASKIVKVEPFNSVKKQMGVVIELPE- 573 (991)
Q Consensus 501 l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~a~-~~--g~-~~--~~~~~~~~il~~~pF~s~~k~msviv~~~~- 573 (991)
.++.||+-....+ ...|+|.|+|.+++.. .. +- .. +..-...+|.+.+.|+|..|||+|+....+
T Consensus 523 ---vlAscHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~ 594 (1160)
T KOG0209|consen 523 ---VLASCHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGP 594 (1160)
T ss_pred ---HHHHHHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccC
Confidence 3344554322211 2699999999998752 11 10 00 011125778999999999999999988643
Q ss_pred ---CeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC-----CCCCCCCC
Q 001960 574 ---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE-----FSADAPIP 645 (991)
Q Consensus 574 ---~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~-----~~~~~~~~ 645 (991)
-.+.+.+|||||.|..+-.. ..+.+++...+|+.+|.||+|++||.+..- .+.+++..
T Consensus 595 g~s~k~~~aVKGAPEvi~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~v 660 (1160)
T KOG0209|consen 595 GSSEKYFVAVKGAPEVIQEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDV 660 (1160)
T ss_pred CCceEEEEEecCCHHHHHHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhh
Confidence 35788999999999876542 234577888999999999999999999743 12355788
Q ss_pred CCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------
Q 001960 646 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------- 704 (991)
Q Consensus 646 e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--------------------- 704 (991)
|.||+|.|++.|.-|+|+|++++|+.|++.+++++|+||||+.||.++|+++||.....
T Consensus 661 EsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~ 740 (1160)
T KOG0209|consen 661 ESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDG 740 (1160)
T ss_pred hhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCC
Confidence 99999999999999999999999999999999999999999999999999999975311
Q ss_pred --------------------eeeeCcccccCC-HHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCCh
Q 001960 705 --------------------IAIEGPEFREKS-DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 763 (991)
Q Consensus 705 --------------------~vi~g~~~~~~~-~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~ 763 (991)
++++|+.++.+. .+.+.++++.+.||||+.|.||..++..+++. |+.++|+|||+||+
T Consensus 741 t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDGTNDV 819 (1160)
T KOG0209|consen 741 TIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDGTNDV 819 (1160)
T ss_pred ceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc-CeEEEEecCCCcch
Confidence 445566555443 34678888999999999999999999999998 99999999999999
Q ss_pred HhhhhCCeeEEecCCCcHHHH-----------------------------------------------------------
Q 001960 764 PALHEADIGLAMGIAGTEVAK----------------------------------------------------------- 784 (991)
Q Consensus 764 ~al~~Advgiamg~~g~~~ak----------------------------------------------------------- 784 (991)
.|||+||||||+= ++++.++
T Consensus 820 GALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~ 898 (1160)
T KOG0209|consen 820 GALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEED 898 (1160)
T ss_pred hhhhhcccceehh-cCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc
Confidence 9999999999975 3333100
Q ss_pred h------------hcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhHHHHHHHH
Q 001960 785 E------------SADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVN 852 (991)
Q Consensus 785 ~------------~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qll~~n 852 (991)
+ +|.+.---.+.+++.++|+.||++.-+.-|.+.. +.-|..... .-.+.++.-..-+...|...-.
T Consensus 899 ~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKI-LALN~LisA-YslSvlyldGVKfgD~QaTisG 976 (1160)
T KOG0209|consen 899 KGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKI-LALNCLISA-YSLSVLYLDGVKFGDTQATISG 976 (1160)
T ss_pred ccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHH-HHHHHHHHH-HHHHHhhhcCceecchhHhHHH
Confidence 0 0111111125778889999999999876555543 333433221 1123445556778888877766
Q ss_pred HHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccc------cccCCCCcccch
Q 001960 853 MIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV------FRLDGPDPDLIL 926 (991)
Q Consensus 853 li~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~~ 926 (991)
+++ ....+.+...+|-+.+.++.|. .+++|.-.+..+++|-..++..++++.-..... .+++..-.+...
T Consensus 977 lLl-a~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~Psll 1052 (1160)
T KOG0209|consen 977 LLL-AACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLL 1052 (1160)
T ss_pred HHH-HHHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhh
Confidence 655 3456677778999999999884 568887777777777777766665543211110 011111123467
Q ss_pred hHHHHHHHHHHHHHHH
Q 001960 927 NTLIFNTFVFCQLQRD 942 (991)
Q Consensus 927 ~t~~f~~~v~~q~~n~ 942 (991)
+|.+|..-...|+-..
T Consensus 1053 Nt~vyiisl~~QvsTF 1068 (1160)
T KOG0209|consen 1053 NTTVYIISLAQQVSTF 1068 (1160)
T ss_pred hhHHHHHHHHHHHHHh
Confidence 8888888878787653
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-59 Score=502.73 Aligned_cols=493 Identities=27% Similarity=0.400 Sum_probs=381.2
Q ss_pred HHHHHHHHHHHHhhhhcCCcEEEEEeC-CeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCccee
Q 001960 219 TSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN 297 (991)
Q Consensus 219 ~~~~~~~~~~~~l~~~~~~~~v~V~R~-G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~ 297 (991)
+.+.+-+-|...|.+......++++++ |..+.|++.+|+.||+|.++.||.||+||.+++|.. +||||.+||||.||-
T Consensus 85 ~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPVi 163 (681)
T COG2216 85 VAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVI 163 (681)
T ss_pred HHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCccee
Confidence 344444445555555444556677775 899999999999999999999999999999999975 999999999999999
Q ss_pred ccCCCC--eEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 298 VNALNP--FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQG 375 (991)
Q Consensus 298 k~~~~~--~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~ 375 (991)
|..++. -+-.||.+++.+.++++++.-.+|.+.|+..+++.++.++||-+.-++-+ ..++.+..++.++.+..
T Consensus 164 resGgD~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iL-----L~~LTliFL~~~~Tl~p 238 (681)
T COG2216 164 RESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTIL-----LSGLTLIFLLAVATLYP 238 (681)
T ss_pred eccCCCcccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHH-----HHHHHHHHHHHHHhhhh
Confidence 987633 28899999999999999999999999999999999999999977655433 22221111111111110
Q ss_pred HhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchhhhccCCeEEEEe
Q 001960 376 LFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICS 455 (991)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~~E~lg~v~~I~~ 455 (991)
...+..+. . -.+...++++|..+|-.+.-.++.-=..+|.|+.+-|++.++..++|..|.+|++..
T Consensus 239 --~a~y~~g~-------~-----~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliL 304 (681)
T COG2216 239 --FAIYSGGG-------A-----ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLL 304 (681)
T ss_pred --HHHHcCCC-------C-----cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEe
Confidence 11111010 0 113345777888899877766666666789999999999999999999999999999
Q ss_pred CccCccccCceEEEEEEEcCeeeeecCCCCCCCCCCCCChhHHHHHHHHHHhcCCCceeecCCCceeecCChhhHHHHHH
Q 001960 456 DKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEF 535 (991)
Q Consensus 456 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~g~p~e~All~~ 535 (991)
|||||+|-|.-.-.+++..+.. +. .+ +..+...++ +. -..|.-+.+++.
T Consensus 305 DKTGTIT~GnR~A~~f~p~~gv----------------~~--~~-la~aa~lsS---l~---------DeTpEGrSIV~L 353 (681)
T COG2216 305 DKTGTITLGNRQASEFIPVPGV----------------SE--EE-LADAAQLAS---LA---------DETPEGRSIVEL 353 (681)
T ss_pred cccCceeecchhhhheecCCCC----------------CH--HH-HHHHHHHhh---hc---------cCCCCcccHHHH
Confidence 9999999887666555544332 11 11 222222221 11 336788899999
Q ss_pred HHHcCCChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHH
Q 001960 536 GLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 615 (991)
Q Consensus 536 a~~~g~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~ 615 (991)
|++.+.+.+...... -....||+.+.|++++-. +++ +-.-|||.+.+....+ +.|...| +.++..
T Consensus 354 A~~~~~~~~~~~~~~-~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~----~~~g~~p------~~l~~~ 418 (681)
T COG2216 354 AKKLGIELREDDLQS-HAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVR----ERGGHIP------EDLDAA 418 (681)
T ss_pred HHHhccCCCcccccc-cceeeecceecccccccC--CCC--ceeecccHHHHHHHHH----hcCCCCC------HHHHHH
Confidence 999886654332221 346789999988877643 333 4567999999987654 2222222 356777
Q ss_pred HHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 001960 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (991)
Q Consensus 616 ~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 695 (991)
.++-++.|-..++++ .|..++|++.++|-++||.+|-+.+||+.|||.+|+||||+.||.+||+
T Consensus 419 ~~~vs~~GGTPL~V~----------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 419 VDEVSRLGGTPLVVV----------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHhcCCCceEEE----------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 888899999888886 4678999999999999999999999999999999999999999999999
Q ss_pred HcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 696 ~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam 775 (991)
+.|++. ..|.++|++|.++++.-|.+ |+.|+|+|||+||+|||.+||||+||
T Consensus 483 EAGVDd---------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~AM 534 (681)
T COG2216 483 EAGVDD---------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAM 534 (681)
T ss_pred HhCchh---------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhhh
Confidence 999975 88999999999999999999 99999999999999999999999999
Q ss_pred cCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 776 GIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 822 (991)
Q Consensus 776 g~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l~ 822 (991)
. +|+..|||++..|=+|.|...+.++++.|+...-.=-..-.|++.
T Consensus 535 N-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIA 580 (681)
T COG2216 535 N-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIA 580 (681)
T ss_pred c-cccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehh
Confidence 8 999999999999999999999999999999876543333344443
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2.7e-33 Score=299.49 Aligned_cols=223 Identities=33% Similarity=0.535 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecc
Q 001960 208 MSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 287 (991)
Q Consensus 208 ~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS 287 (991)
+.+++..++..+.+++.++..+++.+...+..++|+|||++++++++||+|||+|.|++||++||||++++...+.||||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd~s 83 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVDES 83 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEECH
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccccc
Confidence 34445555666667777777777766555545999999999999999999999999999999999999999335899999
Q ss_pred cCCCCCcceeccC----CCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHH
Q 001960 288 SLTGESEPVNVNA----LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLF 363 (991)
Q Consensus 288 ~LTGES~pv~k~~----~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~ 363 (991)
.+|||+.|+.|.+ .++++++||.+.+|++.++|++||.+|..|++.+...+++.+++++++.+++++.++.++.++
T Consensus 84 ~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (230)
T PF00122_consen 84 ALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILA 163 (230)
T ss_dssp HHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccc
Confidence 9999999999971 466899999999999999999999999999999999888888899999999999999888777
Q ss_pred HHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHhccccccccchh
Q 001960 364 FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAA 443 (991)
Q Consensus 364 ~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~~~~~ilvr~~~~ 443 (991)
+++++++++... . ...++...+..++++++++|||+||+++++++.+++++|.++|+++|++++
T Consensus 164 ~~~~~~~~~~~~------~----------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a 227 (230)
T PF00122_consen 164 IAILVFIIWFFN------D----------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSA 227 (230)
T ss_dssp HHHHHHHHCHTG------S----------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTH
T ss_pred cchhhhccceec------c----------cccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCccc
Confidence 776666443211 0 011345678888999999999999999999999999999999999999999
Q ss_pred hhc
Q 001960 444 CET 446 (991)
Q Consensus 444 ~E~ 446 (991)
+|+
T Consensus 228 ~E~ 230 (230)
T PF00122_consen 228 LEA 230 (230)
T ss_dssp HHH
T ss_pred ccC
Confidence 995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.89 E-value=6.3e-23 Score=216.71 Aligned_cols=97 Identities=44% Similarity=0.725 Sum_probs=91.1
Q ss_pred CcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcccc
Q 001960 648 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (991)
Q Consensus 648 ~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 727 (991)
+..++|.+.+.|++||+++++|+.|+++|++++|+|||+..++.++++++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 6889999999999999999999999999999999999999999999999999532
Q ss_pred ceEecc--ChhhH--HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCC
Q 001960 728 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 728 ~v~ar~--sP~~K--~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Ad 770 (991)
.++++. +|++| .++++.|+.+ ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 289999 99999 9999999966 669999999999999999997
No 36
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.70 E-value=2.2e-13 Score=152.51 Aligned_cols=289 Identities=14% Similarity=0.195 Sum_probs=211.8
Q ss_pred CchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC------------------------
Q 001960 582 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 637 (991)
Q Consensus 582 Ga~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~------------------------ 637 (991)
|-...+.+.|+.+++. ....|++...++++++....-.-.| .|+++|||...-.
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 5567889999999974 3567999888888888877766666 4999999975210
Q ss_pred ---CC---------C-----CC-----------CCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHH
Q 001960 638 ---FS---------A-----DA-----------PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (991)
Q Consensus 638 ---~~---------~-----~~-----------~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t 689 (991)
+. + ++ ...-.+.+|.|++....+.|++....|+.|.++.||.+..|-.++..
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 0 00 11124667999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCceeeeCcc--------c----------------------------ccCCHHH--------------
Q 001960 690 AKAIARECGILTDNGIAIEGPE--------F----------------------------REKSDEE-------------- 719 (991)
Q Consensus 690 a~~ia~~~gi~~~~~~vi~g~~--------~----------------------------~~~~~~~-------------- 719 (991)
.+-.|.++||...++..|+-.+ . ..++.|+
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 9999999999987764442110 0 0000011
Q ss_pred --------------------------HhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChH--hhhhCCe
Q 001960 720 --------------------------LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAP--ALHEADI 771 (991)
Q Consensus 720 --------------------------~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~--al~~Adv 771 (991)
++++..-+-.|..++|+.--++++.+|++ |++|+++|...|-.. ..-+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 11111112378999999999999999999 999999999998544 4578999
Q ss_pred eEEecCC------------CcHH-HHhh-----------------cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001960 772 GLAMGIA------------GTEV-AKES-----------------ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 821 (991)
Q Consensus 772 giamg~~------------g~~~-ak~~-----------------ad~vl~~~~~~~i~~~i~~gR~~~~~i~k~i~~~l 821 (991)
+||+..- ++.. ..++ +|+-+-....-++..+|+.+|.....+|+.+.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 9987310 1111 1122 33333333455677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCChhHHHHHHHHHHHhHHHHHHhc---cCCCCcccccc
Q 001960 822 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALA---TEPPNGDLMKR 875 (991)
Q Consensus 822 ~~n~~~i~~~~~~~~~~~~~pl~~~qll~~nli~d~l~~lal~---~e~~~~~l~~~ 875 (991)
+..+...++.|++.++..+..++..+++|...+- .|.+.++ ..+|...+|.+
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc--~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFC--IPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHH--HHHHHHHHHhcCCCccceEEe
Confidence 9999999999999999999999999999998875 4555555 35555555443
No 37
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.64 E-value=9e-17 Score=165.31 Aligned_cols=110 Identities=34% Similarity=0.480 Sum_probs=89.2
Q ss_pred CCChhHHHHHHHHHHHhHHHHHHhccCCCCccccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccccccCC
Q 001960 840 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG 919 (991)
Q Consensus 840 ~~pl~~~qll~~nli~d~l~~lal~~e~~~~~l~~~~P~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~~ 919 (991)
+.|+++.|+||+|+++|++|+++++.|||++++|+|||++++++++++.+|+.++.++++++++.+..++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999998888776655554321
Q ss_pred C---CcccchhHHHHHHHHHHHHHHHHhhcccc
Q 001960 920 P---DPDLILNTLIFNTFVFCQLQRDGKDKRLQ 949 (991)
Q Consensus 920 ~---~~~~~~~t~~f~~~v~~q~~n~~~~r~~~ 949 (991)
. ......+|+.|++++++|++|.+++|+..
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~ 113 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRR 113 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSS
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 1 01234799999999999999999999843
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.54 E-value=4.2e-14 Score=128.50 Aligned_cols=125 Identities=23% Similarity=0.357 Sum_probs=106.9
Q ss_pred cEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccc
Q 001960 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 649 l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (991)
....+.++---++=++++++|++|++. +++++.|||...+....|+-.||....
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 345667777778889999999999999 999999999999999999999987542
Q ss_pred eEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe-cC-CCcHHHHhhcCEEeccCCchHHHHH
Q 001960 729 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM-GI-AGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 729 v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam-g~-~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
+++...|+.|.++++.|++. ++.|.|+|||.||.+||++||+||.. +. ...+-+.++||+++-+ ...++++
T Consensus 73 v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 89999999999999999987 89999999999999999999999874 31 2234467899999866 5555554
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.53 E-value=2.3e-14 Score=128.60 Aligned_cols=87 Identities=38% Similarity=0.604 Sum_probs=71.3
Q ss_pred hcCCCceeecCCCc-eeecCChhhHHHHHHHHHcC--CChHHHhhhcceEEEecCCCCCceEEEEEEeCCCeEEEEEcCc
Q 001960 507 NNTGGEVVIGEGNK-TEILGTPTETAILEFGLLLG--GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 583 (991)
Q Consensus 507 ~~~~~~~~~~~~~~-~~~~g~p~e~All~~a~~~g--~~~~~~~~~~~il~~~pF~s~~k~msviv~~~~~~~~~~~KGa 583 (991)
+|+++.+..+++.. ....|+|+|.||+.++...| .+....+..+++++.+||||+||||+++++ .++.+.+++|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 45666665444332 23799999999999999994 567788899999999999999999999998 334577799999
Q ss_pred hHHHHHhcccc
Q 001960 584 SEIILAACDKF 594 (991)
Q Consensus 584 ~e~il~~c~~~ 594 (991)
||.|+++|+++
T Consensus 81 ~e~il~~Ct~i 91 (91)
T PF13246_consen 81 PEVILDRCTHI 91 (91)
T ss_pred hHHHHHhcCCC
Confidence 99999999853
No 40
>PF12515 CaATP_NAI: Ca2+-ATPase N terminal autoinhibitory domain; InterPro: IPR024750 This entry represents the N-terminal autoinhibitory calmodulin-binding domain characteristic of certain calcium-transporting ATPases []. This domain binds calmodulin in a calcium-dependent fashion and has a conserved RRFR sequence motif. There are two completely conserved residues (F and W) that may be functionally important.; GO: 0005516 calmodulin binding
Probab=99.46 E-value=1.8e-14 Score=106.90 Aligned_cols=46 Identities=63% Similarity=1.076 Sum_probs=43.4
Q ss_pred cccccCCCCCCCCCcHHHHHHHHHhhcccccccccchhhhccchhhh
Q 001960 4 YLNENFSDVKAKNTSEEALQRWRKLCGFVKNRKRRFRFTANLSKRFE 50 (991)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~f~~~~~l~~~~e 50 (991)
|+.++|+ +++||+|+|+++|||+|+++|+|++|||||++||+|+.|
T Consensus 1 yl~~~Fd-i~~Kn~s~e~l~rWR~a~~lv~N~~RRFR~~~dL~k~~e 46 (47)
T PF12515_consen 1 YLDDNFD-IPAKNSSEEALRRWRQAVGLVKNARRRFRYTADLKKREE 46 (47)
T ss_pred CCccccC-CCCCCCCHHHHHHHHHHhHHhccccceeeecccHhhHhc
Confidence 6789998 999999999999999999999999999999999998875
No 41
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.14 E-value=2.7e-10 Score=125.00 Aligned_cols=69 Identities=30% Similarity=0.358 Sum_probs=61.3
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.|+++|||.||.+||+.|++|+||| ++.+.+|+.||+|..+++-.++.++|++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 568888888877766 56899999999999999999999999 9999999999999998889999887753
No 42
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.09 E-value=2.3e-10 Score=97.20 Aligned_cols=68 Identities=25% Similarity=0.524 Sum_probs=63.9
Q ss_pred hhCCHHHHHHHhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHH
Q 001960 117 VHGGVEGIAEKLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVS 186 (991)
Q Consensus 117 ~~~~v~~~~~~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s 186 (991)
+..+++++++.|+++...||++++ +.+|+++||+|.++.++.+++|+.++++|+++++++|++++++|
T Consensus 2 ~~~~~~~v~~~l~t~~~~GLs~~e--v~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 2 HQLSVEEVLKRLNTSSSQGLSSEE--VEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp TTSSHHHHHHHHTTBTSSBBTHHH--HHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHCcCCCCCCCHHH--HHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 346799999999999999999977 99999999999999999999999999999999999999999986
No 43
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.04 E-value=8.4e-10 Score=121.17 Aligned_cols=144 Identities=18% Similarity=0.230 Sum_probs=103.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--eCcccc--cC---------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGPEFR--EK--------------- 715 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi--~g~~~~--~~--------------- 715 (991)
.+.+.++++|++|+++|+++++.||++...+..+.+++|+... ++ .+. .|+.+. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999998531 11 111 010000 00
Q ss_pred ----------------------------------------------------CHHHHhh---hc----c-ccce------
Q 001960 716 ----------------------------------------------------SDEELSK---LI----P-KIQV------ 729 (991)
Q Consensus 716 ----------------------------------------------------~~~~~~~---~~----~-~~~v------ 729 (991)
.++++.+ .+ . +..+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 0000000 00 0 0111
Q ss_pred EeccCh--hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCE--EeccCCchHHHHH
Q 001960 730 MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVTV 802 (991)
Q Consensus 730 ~ar~sP--~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~--vl~~~~~~~i~~~ 802 (991)
+...+| ..|...++.+.+++| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.||+ ++.+++-.++.++
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~ 257 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHY 257 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHH
Confidence 011222 468999999888766 56899999999999999999999999 999999999996 7778888889887
Q ss_pred HH
Q 001960 803 AK 804 (991)
Q Consensus 803 i~ 804 (991)
|+
T Consensus 258 l~ 259 (272)
T PRK15126 258 LT 259 (272)
T ss_pred HH
Confidence 74
No 44
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.04 E-value=1.3e-09 Score=119.21 Aligned_cols=144 Identities=30% Similarity=0.404 Sum_probs=107.4
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee-Ccccc---------------------
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE-GPEFR--------------------- 713 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~-g~~~~--------------------- 713 (991)
+.+.++++|+++++.|+++.++||+....+..+.+++|+... ++ .+.. |+.+.
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~ 100 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQG 100 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccC
Confidence 899999999999999999999999999999999999999741 11 0000 00000
Q ss_pred ------------------------------------------------cCCH---HHHhh----hcc-ccceEeccCh--
Q 001960 714 ------------------------------------------------EKSD---EELSK----LIP-KIQVMARSSP-- 735 (991)
Q Consensus 714 ------------------------------------------------~~~~---~~~~~----~~~-~~~v~ar~sP-- 735 (991)
.... ++..+ .+. ....+.+..+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~ 180 (264)
T COG0561 101 IALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPIS 180 (264)
T ss_pred ceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCce
Confidence 0000 11111 111 1223333332
Q ss_pred -------hhHHHHHHHHHhhcCC---EEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 736 -------MDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 -------~~K~~~v~~l~~~~g~---~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.+|...++.+.+++|- .|+++||+.||.+||+.|+.|+||| ++.+.+|+.||++...++-.+|.+++++
T Consensus 181 lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 181 LDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 6899999999887673 4999999999999999999999999 8899999999999899999999998865
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.01 E-value=2.7e-09 Score=114.06 Aligned_cols=143 Identities=25% Similarity=0.322 Sum_probs=103.9
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee---Cccccc--C---------------
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE---GPEFRE--K--------------- 715 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~---g~~~~~--~--------------- 715 (991)
+.+.+.++|++++++|++++++||+....+..+++.+|+... ++ .+.. ++.+.. +
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 778999999999999999999999999999999999998532 11 1211 111100 0
Q ss_pred ------------------------CHHHHhhhccc----cce-----EeccCh--hhHHHHHHHHHhhcC---CEEEEeC
Q 001960 716 ------------------------SDEELSKLIPK----IQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTG 757 (991)
Q Consensus 716 ------------------------~~~~~~~~~~~----~~v-----~ar~sP--~~K~~~v~~l~~~~g---~~v~~iG 757 (991)
..+++.+.+.+ ..+ +....| ..|...++.+.+++| +.++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 00111111110 111 112222 348888888877755 4689999
Q ss_pred CCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 758 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 758 DG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
|+.||.+|++.|++|+||| ++.+.+|+.||++..+++-.++.++++
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 9999999999999999999 999999999999999888899988775
No 46
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.00 E-value=1.7e-09 Score=120.16 Aligned_cols=129 Identities=20% Similarity=0.308 Sum_probs=100.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ce-eeeCcccccCCHHHHhhhccccceEe-ccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GI-AIEGPEFREKSDEELSKLIPKIQVMA-RSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~-vi~g~~~~~~~~~~~~~~~~~~~v~a-r~sP 735 (991)
++.||+.+.++.|++.|+++.++||.....+..+.+++|+..-- .. +.+|.--. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCc
Confidence 57999999999999999999999999988889999999985310 00 00110000 0111 0234
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
..|.+.++.+.+++| +.+.++|||.||.+|++.|++|+|| ++.+..++.||+++...++.++..++-
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 689999999887756 5799999999999999999999999 688889999999999889999887653
No 47
>PRK10976 putative hydrolase; Provisional
Probab=99.00 E-value=2e-09 Score=117.78 Aligned_cols=68 Identities=24% Similarity=0.285 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcC--EEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD--VIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad--~vl~~~~~~~i~~~i~ 804 (991)
.+|...++.+.+++| +.|+++|||.||.+||+.|+.|+||| ++.+.+|+.|| +|+.+++-.++.++++
T Consensus 189 vsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 189 VSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 468888888877766 56899999999999999999999999 99999999988 7888888889988775
No 48
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.98 E-value=2.2e-09 Score=113.51 Aligned_cols=142 Identities=25% Similarity=0.347 Sum_probs=102.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeC-ccc--ccCC---------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF--REKS--------------- 716 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~g-~~~--~~~~--------------- 716 (991)
.+.+++.++|++|+++|++++++||++...+..+++.+++... ++ .+... ... ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998632 11 12111 100 0000
Q ss_pred --------------------HHHHhhhccc--cceE-----ec--cChhhHHHHHHHHHhhcC---CEEEEeCCCCCChH
Q 001960 717 --------------------DEELSKLIPK--IQVM-----AR--SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAP 764 (991)
Q Consensus 717 --------------------~~~~~~~~~~--~~v~-----ar--~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~ 764 (991)
.+.+.+.+.+ ..+. .. ....+|...++.+.+++| +.++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011111111 1111 11 224689999999887756 35999999999999
Q ss_pred hhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 001960 765 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 765 al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
|++.|++|+||+ ++.+.+|+.||++..+++-.++.++
T Consensus 178 ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 999999999999 9999999999999987777777654
No 49
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.98 E-value=2.6e-09 Score=111.22 Aligned_cols=128 Identities=16% Similarity=0.105 Sum_probs=96.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeC-cccccCCHHHHhhhccccceEeccChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEG-PEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~--~~vi~g-~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
+++|++++.|+.+++.| ++.++||-....+..+++++|+..-- .+.+.+ ..+. .. .. ..|.
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t------------G~-~~--~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV------------GY-QL--RQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE------------Ce-ee--cCcc
Confidence 67999999999999975 99999999999999999999996321 111111 0000 00 11 3578
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 806 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~g 806 (991)
.|...++.+++. |..+.++|||.||.+|++.||+|+++. +.+..+++||=.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 999999999877 878999999999999999999999995 6676666666544444577787777654
No 50
>PLN02887 hydrolase family protein
Probab=98.96 E-value=3.5e-09 Score=125.65 Aligned_cols=68 Identities=32% Similarity=0.432 Sum_probs=59.0
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
+|...++.+.+++| +.|+++|||.||.+||+.|++||||| |+.+.+|+.||+|..+++-.+|.++|++
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 56666677766655 46899999999999999999999999 9999999999999999999999988753
No 51
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=98.93 E-value=2.4e-09 Score=89.65 Aligned_cols=62 Identities=31% Similarity=0.487 Sum_probs=57.1
Q ss_pred HhCCCcCCCCChhHHHHHHHHHhcCCCcCCCCCCccHHHHHHHHHhhHHHHHHHHHHHHHHHhh
Q 001960 127 KLSTSITDGISTSEHLLNRRKEIYGINKFTESPARGFWVYVWEALHDMTLMILAVCALVSLVVG 190 (991)
Q Consensus 127 ~l~~~~~~Gl~~~~~~~~~r~~~~G~N~~~~~~~~~f~~~~~~~~~~~~~~illi~ai~s~~~~ 190 (991)
.++++...||+.++ +++|+++||.|+++.++.+++|+.++++|++++++++++++++|++++
T Consensus 2 ~l~~~~~~GLs~~~--v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEE--AARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHH--HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 46788888999887 999999999999999988999999999999999999999999998764
No 52
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.93 E-value=8.2e-09 Score=109.93 Aligned_cols=144 Identities=24% Similarity=0.331 Sum_probs=102.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc---c-c-ccCCH------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP---E-F-REKSD------------ 717 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~vi~g~---~-~-~~~~~------------ 717 (991)
.+.+.+.++|++++++|+.++++||++...+..+++++|+... ++ .+.... . + ..+..
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4778899999999999999999999999999999999996422 11 111111 0 0 00110
Q ss_pred ------------------------HHHhhhccc----cce-----EeccCh--hhHHHHHHHHHhhcC---CEEEEeCCC
Q 001960 718 ------------------------EELSKLIPK----IQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 759 (991)
Q Consensus 718 ------------------------~~~~~~~~~----~~v-----~ar~sP--~~K~~~v~~l~~~~g---~~v~~iGDG 759 (991)
+...+...+ ..+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 111111100 001 111122 588999999887756 569999999
Q ss_pred CCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchH----HHHHHH
Q 001960 760 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVAK 804 (991)
Q Consensus 760 ~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~----i~~~i~ 804 (991)
.||.+|++.|++|+||| ++.+.+|+.||+|..+++-.+ +...++
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999998888888 665553
No 53
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.93 E-value=4.4e-09 Score=113.55 Aligned_cols=145 Identities=26% Similarity=0.355 Sum_probs=104.2
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-ee--------------------------
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IA-------------------------- 706 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~----~~-~v-------------------------- 706 (991)
...+.+.+.+++++++++|+++++.||+....+..+..++++... ++ .+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345778999999999999999999999999999999999998621 11 00
Q ss_pred --------eeCcccc---c------------------------------------CCHHH-------HhhhccccceEec
Q 001960 707 --------IEGPEFR---E------------------------------------KSDEE-------LSKLIPKIQVMAR 732 (991)
Q Consensus 707 --------i~g~~~~---~------------------------------------~~~~~-------~~~~~~~~~v~ar 732 (991)
.++..+. . .+.++ +.+.+.....+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000000 0 00111 1111111111221
Q ss_pred -------c--ChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 733 -------S--SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 733 -------~--sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
. ....|...++.+.+.+| +.++++||+.||.+||+.|+.|+||+ ++++..|+.||+++...+-.++.
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 2 23789999999987656 57899999999999999999999999 99999999999999887778888
Q ss_pred HHH
Q 001960 801 TVA 803 (991)
Q Consensus 801 ~~i 803 (991)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 764
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.85 E-value=1.8e-08 Score=110.65 Aligned_cols=68 Identities=28% Similarity=0.387 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+|...++.+.+++| +.++++||+.||.+|++.|++|+||| ++.+..|+.||+++.+++-.++.++++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 457777777766656 46999999999999999999999999 888888999999999989999998875
No 55
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.84 E-value=1.7e-08 Score=105.72 Aligned_cols=115 Identities=27% Similarity=0.328 Sum_probs=90.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-------eeeCcccccCCHHHHhhhccccceEe
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFREKSDEELSKLIPKIQVMA 731 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-------vi~g~~~~~~~~~~~~~~~~~~~v~a 731 (991)
.+++|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.. +++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 68999999999999999999999999999999999999999753211 22332 333
Q ss_pred -ccChhhHHHHHHHHHhhcCC---EEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEecc
Q 001960 732 -RSSPMDKHTLVKHLRTTLGE---VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 793 (991)
Q Consensus 732 -r~sP~~K~~~v~~l~~~~g~---~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~ 793 (991)
.+..+.|...++.+.+..|. .+.++|||.||.|||+.|+.+++.+ +.+..+..|+..+-.
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~~ 201 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIWP 201 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcCh
Confidence 34457899999888776563 5889999999999999999999885 555556666665543
No 56
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.84 E-value=1.1e-08 Score=108.44 Aligned_cols=128 Identities=21% Similarity=0.299 Sum_probs=95.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce--eeeCcccccCCHHHHhhhccccceEec-cChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI--AIEGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~--vi~g~~~~~~~~~~~~~~~~~~~v~ar-~sP~ 736 (991)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..--.. ...+..+. ..+.+. ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 5899999999999999999999999999999999999998641100 00000000 001111 1233
Q ss_pred hHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 001960 737 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 737 ~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
.|..+++.+.++.| +.+.++||+.||.+|++.|+++++++ +.+..+++||+++.++++..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47778877766534 35889999999999999999999885 678889999999999998888754
No 57
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.78 E-value=4.7e-08 Score=97.40 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=81.2
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHh
Q 001960 668 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 747 (991)
Q Consensus 668 ~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~ 747 (991)
+|++|++.|+++.++||++...+..+.+.+|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 9999999999999999999999999999999863 22211 345666666655
Q ss_pred hcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCC
Q 001960 748 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 795 (991)
Q Consensus 748 ~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~ 795 (991)
++| +.++|+||+.||.+|++.|+++++|. ++.+..+..||+++..+.
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAG 136 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCC
Confidence 434 57999999999999999999999998 788888999999997654
No 58
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.76 E-value=2.8e-08 Score=99.90 Aligned_cols=102 Identities=18% Similarity=0.207 Sum_probs=81.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
.+|+.|+++|+++.++|+.+...+..+.+.+|+.. +|.... .|...++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~k--pkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGIK--KKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecCC--CCHHHHHHHH
Confidence 48999999999999999999999999999999963 222222 2333444444
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchH
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 798 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~ 798 (991)
+++| +.++++||+.||.+|++.|++++||+ ++.+.+++.|+++...++-.+
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g 145 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHG 145 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCC
Confidence 4333 56999999999999999999999999 899999999999986555433
No 59
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.69 E-value=1.8e-07 Score=101.69 Aligned_cols=144 Identities=17% Similarity=0.132 Sum_probs=97.9
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc----CCc-eeeeCc--c------c--ccCCHHHHhhhc-
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNG-IAIEGP--E------F--REKSDEELSKLI- 724 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~----~~~-~vi~g~--~------~--~~~~~~~~~~~~- 724 (991)
..+.+.++|++|+++|++++++||+....+..+.+++|+.. .++ .+.... . + ..++.+...+++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44568999999999999999999999999999999999752 122 222211 1 0 001111000000
Q ss_pred ----------------------------------------------------------cc--cceE-----ecc--Chhh
Q 001960 725 ----------------------------------------------------------PK--IQVM-----ARS--SPMD 737 (991)
Q Consensus 725 ----------------------------------------------------------~~--~~v~-----ar~--sP~~ 737 (991)
.+ +.+. -.. .-..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 00 0000 001 1256
Q ss_pred HHHHHHHHHhhcC-----CEEEEeCCCCCChHhhhhCCeeEEecCCCc---HHHHhh--c-CEEeccCCchHHHHHHHH
Q 001960 738 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--A-DVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 738 K~~~v~~l~~~~g-----~~v~~iGDG~ND~~al~~Advgiamg~~g~---~~ak~~--a-d~vl~~~~~~~i~~~i~~ 805 (991)
|...++.+.+.+| +.++++||+.||.+|++.|++|+||| ++. +..|+. | ++|..+++-+++.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 7777887776644 45999999999999999999999999 776 357776 4 588888889999988754
No 60
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.69 E-value=7.3e-08 Score=104.86 Aligned_cols=66 Identities=33% Similarity=0.430 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|+||+ ++.+.+|+.||+++.+++-.++.++
T Consensus 187 ~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 187 VSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred CChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 568999999887755 57999999999999999999999999 8899999999999988888887654
No 61
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.66 E-value=2.1e-07 Score=102.14 Aligned_cols=145 Identities=15% Similarity=0.105 Sum_probs=96.9
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCc-eeeeCcc--------c-c-cCCHHHHhhhc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAIEGPE--------F-R-EKSDEELSKLI 724 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~-----~~~-~vi~g~~--------~-~-~~~~~~~~~~~ 724 (991)
+-+.++++|++|+++|+++++.||+....+..+++++|+.. .++ .+..... . . .++.+.+.+++
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 45678999999999999999999999999999999999842 122 2222100 0 0 01111100000
Q ss_pred --------------------------------------c-------------------------ccce-----EeccCh-
Q 001960 725 --------------------------------------P-------------------------KIQV-----MARSSP- 735 (991)
Q Consensus 725 --------------------------------------~-------------------------~~~v-----~ar~sP- 735 (991)
. .+.+ +-...|
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~ 184 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLDA 184 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEecC
Confidence 0 0000 001122
Q ss_pred -hhHHHHHHHHHhhcC------CEEEEeCCCCCChHhhhhCCeeEEecCCCcHH-----HHhhcCEEeccCCchHHHHHH
Q 001960 736 -MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 736 -~~K~~~v~~l~~~~g------~~v~~iGDG~ND~~al~~Advgiamg~~g~~~-----ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+|...++.+.+.+| +.|+++|||.||.+||+.|++|+|||....+. .+..+|++....+-+++.+++
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 567777777766544 46999999999999999999999999333232 345799999888888998887
Q ss_pred HH
Q 001960 804 KW 805 (991)
Q Consensus 804 ~~ 805 (991)
++
T Consensus 265 ~~ 266 (271)
T PRK03669 265 DH 266 (271)
T ss_pred HH
Confidence 64
No 62
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.61 E-value=1.4e-07 Score=96.87 Aligned_cols=109 Identities=18% Similarity=0.231 Sum_probs=86.6
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
.+|+.|+++|+++.++||+....+..+++++|+.. ++. ...+|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 69999999999999999999999999999999863 222 2245667777665
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCC----chHHHHHHHH
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKW 805 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~----~~~i~~~i~~ 805 (991)
+++| +.++|+||+.||.+|++.|+++++++ ++.+..+..||+++.... +..+.+.+..
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~ 170 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLL 170 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHH
Confidence 5545 46999999999999999999999998 778888899999996432 4445554433
No 63
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.58 E-value=1.7e-07 Score=89.21 Aligned_cols=118 Identities=20% Similarity=0.301 Sum_probs=96.6
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHH
Q 001960 667 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 667 ~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
-.|+.|.++||++.++||++...+..=|+++||.. +..| -.+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~----~~qG-------------------------~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH----LYQG-------------------------ISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce----eeec-------------------------hHhHHHHHHHHH
Confidence 37999999999999999999999999999999963 2222 248888888887
Q ss_pred hhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCC----chHHHHHHHHHHHHHHHHH
Q 001960 747 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN----FSTIVTVAKWGRSVYINIQ 814 (991)
Q Consensus 747 ~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~----~~~i~~~i~~gR~~~~~i~ 814 (991)
++++ +.|+++||..||.|+++..+.++|+. .+.+-.++.||+|+.... +..+.++|..++..++-..
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~~ 166 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEAL 166 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHHH
Confidence 7755 57999999999999999999999998 888888999999997654 4556666666666555443
No 64
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.52 E-value=9.6e-07 Score=96.98 Aligned_cols=67 Identities=22% Similarity=0.213 Sum_probs=54.2
Q ss_pred hHHHHHHHHHhhcC----CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHH----hhc-CEEe--ccCCchHHHHHHH
Q 001960 737 DKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK----ESA-DVII--LDDNFSTIVTVAK 804 (991)
Q Consensus 737 ~K~~~v~~l~~~~g----~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak----~~a-d~vl--~~~~~~~i~~~i~ 804 (991)
+|...++.+.+.+| +.|+++||+.||.+|++.|++|++|+ |+.+..| ..| +.+. ..++-.++.++++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 67777777765433 78999999999999999999999999 9998888 666 6777 4556778887764
No 65
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.49 E-value=6.8e-07 Score=93.71 Aligned_cols=123 Identities=22% Similarity=0.303 Sum_probs=90.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHHhhhccccceEe--ccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~--~~~vi~g~~~~~~~~~~~~~~~~~~~v~a--r~sP 735 (991)
++.||+++.++.|+++ +++.++|+.....+..+.+++|+..- +.....+.. .+.+ -..|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG----------------MITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC----------------eEECcccccc
Confidence 4589999999999999 99999999999999999999998531 101111110 0111 1247
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCE-EeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV-IILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~-vl~~~~~~~i~~~i 803 (991)
..|...++.++.. ++.+.|+|||.||.+|.+.|++|+..+ .+.+.....++. ++. ++..+...+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 7898999988877 788999999999999999999999876 444444455665 443 366666554
No 66
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.42 E-value=9.1e-07 Score=92.29 Aligned_cols=118 Identities=22% Similarity=0.241 Sum_probs=83.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
+++|++.+.++.|++.|+++.++|+-....+..+++.+|+..--...+...+-.... +. .+....|..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~~--------p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFIQ--------PD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeEe--------cc--eeeEEccccHH
Confidence 589999999999999999999999999999999999999753111111100000000 11 11123456787
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcC
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 788 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad 788 (991)
..++.+.+++| +.+.++||+.||.+|++.|+++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 77777765534 46899999999999999999999997 44444555554
No 67
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.37 E-value=1.8e-06 Score=92.77 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=59.4
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcC----EEeccCCchHHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD----VIILDDNFSTIVTVAKW 805 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad----~vl~~~~~~~i~~~i~~ 805 (991)
..|...++.+.+++| +.++++||+.||.+|++.|++|++|+ ++.+..|+.|| ++...++-.++.++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 478889999887766 35888999999999999999999999 88999999999 77777777888888754
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.36 E-value=8.1e-07 Score=87.35 Aligned_cols=105 Identities=23% Similarity=0.377 Sum_probs=77.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eee--eCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAI--EGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~----~vi--~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
.+-||+++.+..|++.|.+|.++||--..-+..+|.++||+..+. +.. +|+-.. .+ ...-. +
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-fd---------~~~pt--s 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-FD---------TNEPT--S 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-cc---------cCCcc--c
Confidence 467999999999999999999999999999999999999975321 000 111000 00 00011 1
Q ss_pred ChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
...-|.++++.+++.+. +.++|||||.||.+|+..||.=|+.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 23579999999988644 57999999999999999988777554
No 69
>PLN02954 phosphoserine phosphatase
Probab=98.24 E-value=8e-06 Score=86.88 Aligned_cols=126 Identities=26% Similarity=0.357 Sum_probs=85.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc---eeeeCcccccCCHHHHhhhccccceEec----
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---IAIEGPEFREKSDEELSKLIPKIQVMAR---- 732 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~---~vi~g~~~~~~~~~~~~~~~~~~~v~ar---- 732 (991)
+++|++++.++.|++.|+++.++||.....+..+++.+|+....- .+..+.+ -.+.+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~---------------g~~~g~~~~~ 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS---------------GEYAGFDENE 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC---------------CcEECccCCC
Confidence 378999999999999999999999999999999999999963110 0000000 001111
Q ss_pred --cChhhHHHHHHHHHhhcC-CEEEEeCCCCCChHhhhh--CCeeEEecCCC-cHHHHhhcCEEeccCCchHHHHH
Q 001960 733 --SSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHE--ADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 733 --~sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~al~~--Advgiamg~~g-~~~ak~~ad~vl~~~~~~~i~~~ 802 (991)
+.+..|...++.+.+++| +.++++||+.||..|.++ ++++++.|... .+.....+|+++.+ +..+.++
T Consensus 149 ~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~ 222 (224)
T PLN02954 149 PTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIEV 222 (224)
T ss_pred cccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHHh
Confidence 112357788887776544 568899999999999877 56666655221 23345568999854 6666543
No 70
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.22 E-value=8.4e-06 Score=88.26 Aligned_cols=147 Identities=16% Similarity=0.190 Sum_probs=99.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC------c-eeeeCc-ccccC--------------
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN------G-IAIEGP-EFREK-------------- 715 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~------~-~vi~g~-~~~~~-------------- 715 (991)
..+..|...++++++++.|+.++++||+....+..+.+++++..+. + .+..+. .....
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567899999999999999999999999999999999999976542 1 111111 00000
Q ss_pred ----------------------------CHH-------HHhhhcc----ccce-Ee-----ccCh--hhHHHHHHHHHhh
Q 001960 716 ----------------------------SDE-------ELSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 748 (991)
Q Consensus 716 ----------------------------~~~-------~~~~~~~----~~~v-~a-----r~sP--~~K~~~v~~l~~~ 748 (991)
..+ ++.+.+. ++.+ .+ ...| ..|...++.+.++
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 000 0111111 1111 11 1223 6899999999887
Q ss_pred cC---CEEEEeCCCCCChHhhhh-CCeeEEecCCCcHHHHhhcC-------EEeccCCchHHHHHHHH
Q 001960 749 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW 805 (991)
Q Consensus 749 ~g---~~v~~iGDG~ND~~al~~-Advgiamg~~g~~~ak~~ad-------~vl~~~~~~~i~~~i~~ 805 (991)
+| +.|+++||+.||.+|++. ++.|++|+ ++.+..|+.++ ++.....-+++.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 65 579999999999999998 67999999 88888776543 55555556777777643
No 71
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.20 E-value=7.7e-06 Score=86.41 Aligned_cols=134 Identities=16% Similarity=0.143 Sum_probs=87.7
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhccccceE--ecc
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM--ARS 733 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~---~~~vi~g~~~~~~~~~~~~~~~~~~~v~--ar~ 733 (991)
-+++||+++.++.|++.|+++.++||.....+..+.+.++.... +...++|..+... .+.-..+ ...
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~--------~p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHID--------WPHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEe--------CCCCCccccccC
Confidence 47899999999999999999999999999999999888754321 1122333322110 0000000 011
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHH--hhcCEEeccCCchHHHHHHH
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK--ESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak--~~ad~vl~~~~~~~i~~~i~ 804 (991)
....|..+++.++.. ++.+.|+|||.||.+|++.||+.+|=+ .-.+-.+ ..+.+.+ ++|..+...++
T Consensus 141 cg~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 135799999998876 677899999999999999999988644 2112111 1122222 45777776653
No 72
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.09 E-value=5.9e-06 Score=85.45 Aligned_cols=92 Identities=28% Similarity=0.332 Sum_probs=69.0
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh-h--HH
Q 001960 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 739 (991)
Q Consensus 663 ~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-~--K~ 739 (991)
|++++.|+.++++|++++++||+....+..+++.+|+.... ++..+....- +....++.+|. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~~~~~----------~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNELFDNG----------GGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEEECTT----------CCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEeeeecc----------cceeeeeECCCCCCcHH
Confidence 78889999999999999999999999999999999997532 1111100000 11244555554 4 99
Q ss_pred HHHHHH------HhhcCCEEEEeCCCCCChHhhh
Q 001960 740 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 767 (991)
Q Consensus 740 ~~v~~l------~~~~g~~v~~iGDG~ND~~al~ 767 (991)
..++.+ +.. ...+.++|||.||.||||
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 233 578999999999999986
No 73
>PRK08238 hypothetical protein; Validated
Probab=98.05 E-value=0.00025 Score=83.34 Aligned_cols=98 Identities=20% Similarity=0.276 Sum_probs=75.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
|++|++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.+++. .++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~------------------~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT------------------TNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc------------------cccCCchHH
Confidence 578999999999999999999999999999999999999832 33333221 135667776
Q ss_pred HHHHHHHhhcCCE-EEEeCCCCCChHhhhhCCeeEEecCCCcHH
Q 001960 740 TLVKHLRTTLGEV-VAVTGDGTNDAPALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 740 ~~v~~l~~~~g~~-v~~iGDG~ND~~al~~Advgiamg~~g~~~ 782 (991)
+.++.. .++. +.++||..||.|+++.|+-.++++ .+...
T Consensus 131 ~~l~~~---l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~l 170 (479)
T PRK08238 131 AALVEA---FGERGFDYAGNSAADLPVWAAARRAIVVG-ASPGV 170 (479)
T ss_pred HHHHHH---hCccCeeEecCCHHHHHHHHhCCCeEEEC-CCHHH
Confidence 655432 2332 678899999999999999999997 44444
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.05 E-value=2.8e-05 Score=82.73 Aligned_cols=128 Identities=23% Similarity=0.352 Sum_probs=87.5
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.||+.+.++.|++.|+++.++||.....+..+.+..|+...-..++.+++.. .....|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLP----------------NKKPDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCC----------------CCCcChHHH
Confidence 4578999999999999999999999999999999999999864322333322210 011122222
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe-eEEe--cCC-CcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAM--GIA-GTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv-giam--g~~-g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
..+.+.++.. .+.++++||+.||+.+.+.|++ +|.+ |.. ..+.....+|+++. ++..+...+.+
T Consensus 156 ~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 156 LLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred HHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 3333444333 3678999999999999999998 4444 311 23444567888884 48888877654
No 75
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.04 E-value=2.8e-05 Score=82.52 Aligned_cols=127 Identities=24% Similarity=0.369 Sum_probs=94.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..++-|+++++++.|+++|++..++|+++...+..+.+..|+...-..++.+.+.. ...-.|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~----------------~~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----------------PPKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC----------------CCCcCHHH
Confidence 45678999999999999999999999999999999999999976433333322211 11234555
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCC---eeEEecCC-CcHHHHhhcCEEeccCCchHHHHHH
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Ad---vgiamg~~-g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
...+.+.+... .+.++||||..+|..|=++|+ ||+..|.+ +.+.....+|+++.+ +..+...+
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 55555555443 357999999999999999998 77888743 455677779999965 77776554
No 76
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.03 E-value=1.7e-05 Score=82.95 Aligned_cols=107 Identities=16% Similarity=0.162 Sum_probs=77.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhccccceE-eccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVM-ARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~vi~g~~~~~~~~~~~~~~~~~~~v~-ar~s 734 (991)
..+++|++.+.++.+++.|++++++||.....+..+++.+|+..--+ .....+.. .+ .+ +. -.+.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~--~~--------g~--~~~~~~~ 152 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGI--YT--------GN--IDGNNCK 152 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCE--Ee--------CC--ccCCCCC
Confidence 45689999999999999999999999999999999999999853100 11100000 00 00 00 1234
Q ss_pred hhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
++.|...++.+.++.+ +.+.++||+.+|.||++.|+.++++.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 5788888887765434 36889999999999999999999875
No 77
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.02 E-value=2.4e-05 Score=83.16 Aligned_cols=43 Identities=12% Similarity=0.143 Sum_probs=38.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
.+..-++++++|++|+++|++++++||+....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3455667999999999999999999999999999999999974
No 78
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.01 E-value=2.5e-05 Score=80.45 Aligned_cols=114 Identities=18% Similarity=0.180 Sum_probs=77.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc-cccceEec-cChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI-PKIQVMAR-SSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~-~~~~v~ar-~sP~ 736 (991)
-+++|++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..++.++.... .. ...... .++.++.. ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~g~ 148 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFD-ND-GRHIVWPHHCHGCCSCPCGC 148 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceEC-CC-CcEEEecCCCCccCcCCCCC
Confidence 47899999999999999999999999999999999999998643223333222110 00 000000 11111111 1224
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
.|.++++.++++..+.+.++|||.||..|.++||+-+|
T Consensus 149 ~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 149 CKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 69999999877534679999999999999999988664
No 79
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.01 E-value=1.3e-05 Score=81.82 Aligned_cols=97 Identities=22% Similarity=0.296 Sum_probs=70.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCc-ccccCCHHHHhhhccccceE--eccC
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGP-EFREKSDEELSKLIPKIQVM--ARSS 734 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~--~vi~g~-~~~~~~~~~~~~~~~~~~v~--ar~s 734 (991)
+++|++++.++.+++.|+++.++||.....+..+++.+|+..--. ...+.. .+. .+ +. ....
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~-----------g~--~~~~~~~~ 139 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLT-----------GP--IEGQVNPE 139 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEe-----------Cc--cCCcccCC
Confidence 368999999999999999999999999999999999999863110 111000 000 00 00 1245
Q ss_pred hhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhC
Q 001960 735 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 769 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~A 769 (991)
+..|...++.++++.| +.+.++|||.||.+|++.|
T Consensus 140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 140 GECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 6889999998776533 4689999999999999875
No 80
>PLN02382 probable sucrose-phosphatase
Probab=97.97 E-value=4.6e-05 Score=88.17 Aligned_cols=144 Identities=18% Similarity=0.156 Sum_probs=93.9
Q ss_pred CcccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCce-------eeeCccccc------------------
Q 001960 661 MRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-------AIEGPEFRE------------------ 714 (991)
Q Consensus 661 lr~~v~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~-------vi~g~~~~~------------------ 714 (991)
+.+...+++ +++++.|+.+++.||+.......+.++.++..++-. +..+.....
T Consensus 29 ~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~ 108 (413)
T PLN02382 29 LSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVV 108 (413)
T ss_pred hhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHH
Confidence 333344555 889999999999999999999999999998765311 111111100
Q ss_pred -----C--------------------CHH-------HHhhhcc----ccce------EeccCh--hhHHHHHHHHHhhc-
Q 001960 715 -----K--------------------SDE-------ELSKLIP----KIQV------MARSSP--MDKHTLVKHLRTTL- 749 (991)
Q Consensus 715 -----~--------------------~~~-------~~~~~~~----~~~v------~ar~sP--~~K~~~v~~l~~~~- 749 (991)
+ .++ ++.+.+. ++.+ +-...| ..|...++.|.+++
T Consensus 109 ~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~ 188 (413)
T PLN02382 109 EETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLK 188 (413)
T ss_pred HHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhh
Confidence 0 000 1111110 1111 112233 56999999998876
Q ss_pred --C---CEEEEeCCCCCChHhhhhCC-eeEEecCCCcHHHHhhc--------CEEec-cCCchHHHHHHHH
Q 001960 750 --G---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVAKESA--------DVIIL-DDNFSTIVTVAKW 805 (991)
Q Consensus 750 --g---~~v~~iGDG~ND~~al~~Ad-vgiamg~~g~~~ak~~a--------d~vl~-~~~~~~i~~~i~~ 805 (991)
| +.++++||+.||.+||+.|+ .||+|| |+.+..|+.+ +++.. +.+-++|.+++++
T Consensus 189 ~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 189 AEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 4 47899999999999999999 699999 8888877643 44433 3356677776643
No 81
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.95 E-value=2.7e-05 Score=82.54 Aligned_cols=130 Identities=20% Similarity=0.200 Sum_probs=83.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhccccce--E-ec
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQV--M-AR 732 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~----~~vi~g~~~~~~~~~~~~~~~~~~~v--~-ar 732 (991)
+++||+.+.++.|++.|+++.++||-....+..+.+.+ +.... ....+|+.+... .+.-.. + .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~--------kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT--------WPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe--------ccCCcccccccc
Confidence 67999999999999999999999999999999999988 64311 111222221100 000000 0 00
Q ss_pred cChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHh--hcCEEeccCCchHHHHHH
Q 001960 733 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE--SADVIILDDNFSTIVTVA 803 (991)
Q Consensus 733 ~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~--~ad~vl~~~~~~~i~~~i 803 (991)
+ ...|..+++.++.. ...+.++|||.||.+|.+.||+.++-+ .-.+.+++ .+.+.+ ++|..+...+
T Consensus 145 ~-~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 C-GCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFARD-FLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred C-CCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCcceeHH-HHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 1 13488888888766 667999999999999999999977632 11122122 233333 3477776654
No 82
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.89 E-value=6e-05 Score=78.99 Aligned_cols=125 Identities=19% Similarity=0.267 Sum_probs=83.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.....+..+.+..|+...-+.++...+. ...+-.|+-=.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC----------------CCCCCChHHHH
Confidence 67899999999999999999999999999999999999986422222222211 01122222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE---ecC-CCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia---mg~-~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+++.++-. .+.++|+||+.+|..+-++|++... -|. ...+..++.+|+++.+ +..+..++
T Consensus 139 ~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 333333322 3679999999999999999998643 331 2223466789999854 66666544
No 83
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.87 E-value=3.3e-05 Score=74.33 Aligned_cols=117 Identities=21% Similarity=0.160 Sum_probs=76.6
Q ss_pred eccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 656 ~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
.-..++++++++.+++|++.|++++++||.....+....+.+|+......++......................+++..|
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNP 99 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCH
Confidence 45668999999999999999999999999999999999999998432222222111100000000000111123345556
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhC-CeeE
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA-DIGL 773 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~A-dvgi 773 (991)
..+..+.+.+... .+.+.++||+.||..|.+.+ .-+|
T Consensus 100 ~~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 100 DKLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred HHHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcCCcee
Confidence 6666666665544 56799999999999999984 3343
No 84
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.86 E-value=0.00012 Score=77.69 Aligned_cols=38 Identities=16% Similarity=0.220 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 663 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 663 ~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
+.++++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
No 85
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.81 E-value=0.00014 Score=79.37 Aligned_cols=137 Identities=12% Similarity=0.232 Sum_probs=88.0
Q ss_pred CCcccHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCc--cCCce-ee--eCcc-cccCC----------------
Q 001960 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGI-AI--EGPE-FREKS---------------- 716 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~~gi~--~~~~~-vi--~g~~-~~~~~---------------- 716 (991)
.+-++++++|++|++ .|+.++++||+....+..+.+.+++. ..++. +. .+.. ...++
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 445789999999998 79999999999999999888777642 22221 11 0100 00011
Q ss_pred ------------------------HHHHhhh-------ccccce-----EeccCh--hhHHHHHHHHHhhcC---CEEEE
Q 001960 717 ------------------------DEELSKL-------IPKIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAV 755 (991)
Q Consensus 717 ------------------------~~~~~~~-------~~~~~v-----~ar~sP--~~K~~~v~~l~~~~g---~~v~~ 755 (991)
.+.+.++ .+...+ +....| .+|...++.+.+.+| +.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 1111111 111111 111222 588888888877755 57889
Q ss_pred eCCCCCChHhhhhC----CeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 756 TGDGTNDAPALHEA----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 756 iGDG~ND~~al~~A----dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
+||+.||.+|++.+ +.||+|| ++. ..|++.+.+ ...+...+
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L 240 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWL 240 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHH
Confidence 99999999999999 9999999 553 447887764 55555544
No 86
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.71 E-value=0.00017 Score=77.63 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=38.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 701 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~ 701 (991)
+..-+.++++|++|+++||.+++.||........+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
No 87
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.64 E-value=0.00027 Score=77.51 Aligned_cols=123 Identities=18% Similarity=0.307 Sum_probs=81.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++.|++.++++.|++.|+++.++|+.+...+..+....|+...-+.++.+++. .+..| +
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~------------------~~~Kp--~ 159 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTL------------------PQKKP--D 159 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCC------------------CCCCC--C
Confidence 478899999999999999999999999999999898888885422223332221 11112 1
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCee-EEe--cCC-CcHHHHhhcCEEeccCCchHHHHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAM--GIA-GTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advg-iam--g~~-g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
...++.+.++.| +.++++||+.||..+.+.|++. +++ |-. ..+..+..+|+++. ++..+.+++
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 223333322223 5799999999999999999973 333 311 12234457999884 477766543
No 88
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.60 E-value=0.00029 Score=74.39 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=83.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+++|+++.++|+.....+..+.+..|+...-..++.+++.. .....|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE----------------HAKPDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC----------------CCCCCcHHHH
Confidence 368999999999999999999999999999999999999864322333322210 0112233223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee---EEecCCCcH-HHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg---iamg~~g~~-~ak~~ad~vl~~~~~~~i~~~i 803 (991)
.+.+.+.-. .+.+++|||+.+|..|-++|++- +.-|....+ .....+|+++.+ +..+.+++
T Consensus 146 ~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 333333322 35689999999999999999984 333411222 334568888754 77777654
No 89
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.59 E-value=0.00026 Score=74.53 Aligned_cols=120 Identities=19% Similarity=0.277 Sum_probs=80.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.....+..+.+..|+...-..++.+++. .+..|. -
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~--p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSL------------------AQRKPH--P 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCC------------------CCCCCC--h
Confidence 57899999999999999999999999999999999999986432233322221 112221 2
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEE-e--cCCC-cHHHHhhcCEEeccCCchHHHH
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA-M--GIAG-TEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgia-m--g~~g-~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
..+..+.+++| +.++++||+.+|..+.+.|++-.. + |-.. .+.....+|+++.+ +..+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~~ 211 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELPP 211 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHHh
Confidence 22222222223 568999999999999999997654 2 2111 12334568888854 665543
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.50 E-value=0.00054 Score=73.18 Aligned_cols=127 Identities=18% Similarity=0.201 Sum_probs=85.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.+...+..+-+..|+...-..++.+.+. -...-.|+-=.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTL----------------AERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcC----------------CCCCCCHHHHH
Confidence 57899999999999999999999999999888888889986432333333221 01122333333
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE---ecCC-Cc-HHHHhhcCEEeccCCchHHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIA-GT-EVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia---mg~~-g~-~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.+.+.+.-. .+.++||||+.||..|-+.|++... -|-. .. +.....+|+++.+ +..+.+.+.|
T Consensus 159 ~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNPATW 226 (229)
T ss_pred HHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHHhcC
Confidence 444444333 4679999999999999999997642 2311 11 1234569999854 7777665544
No 91
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.43 E-value=0.00058 Score=81.59 Aligned_cols=40 Identities=8% Similarity=0.179 Sum_probs=36.2
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
.-+.+.++|++|+++|+.++++||+....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 3356799999999999999999999999999999999974
No 92
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.43 E-value=0.00062 Score=72.31 Aligned_cols=120 Identities=18% Similarity=0.265 Sum_probs=80.7
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.||+.++++.|++.|+++.++|+........+.+..|+...-..++.+.+. ....|..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~------------------~~~Kp~~- 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKL------------------PYSKPHP- 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccC------------------CCCCCCH-
Confidence 357899999999999999999999999999999999999986543333333221 0112222
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCC---cHHHHhhcCEEeccCCchHHH
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAG---TEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g---~~~ak~~ad~vl~~~~~~~i~ 800 (991)
.+.+.+.+++| +.++++||..||+.+-+.|++....-..+ .+.-...+|+++.+ +..+.
T Consensus 152 -~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 152 -EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred -HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 23333333324 56899999999999999999875432122 22223357887744 66554
No 93
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.36 E-value=0.00062 Score=71.20 Aligned_cols=116 Identities=23% Similarity=0.408 Sum_probs=77.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC--CccCCceee-e-Cccc-cc--------------------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG--ILTDNGIAI-E-GPEF-RE-------------------- 714 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g--i~~~~~~vi-~-g~~~-~~-------------------- 714 (991)
++.+.+.+++++|++.|++++++||+....+..+.++++ +...++..+ . +... ..
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477899999999999999999999999999999998754 222222111 1 1100 00
Q ss_pred -C---------------------C----HH---HHhhhc-------cccceEe------ccCh--hhHHHHHHHHHhhcC
Q 001960 715 -K---------------------S----DE---ELSKLI-------PKIQVMA------RSSP--MDKHTLVKHLRTTLG 750 (991)
Q Consensus 715 -~---------------------~----~~---~~~~~~-------~~~~v~a------r~sP--~~K~~~v~~l~~~~g 750 (991)
+ . ++ ++.+.+ ..+.+.. ...| .+|...++.+.+++|
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 0 00 000000 1122221 1223 789999999887755
Q ss_pred ---CEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 751 ---EVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 751 ---~~v~~iGDG~ND~~al~~Advgiam 775 (991)
+.++++||+.||.+|++.+++|+||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 4699999999999999999999997
No 94
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.33 E-value=0.0025 Score=68.89 Aligned_cols=134 Identities=16% Similarity=0.202 Sum_probs=84.3
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceE-eccCh--
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM-ARSSP-- 735 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~-ar~sP-- 735 (991)
-++|||+.+.++.|++.|+++.++||-....+..+.++.|+...+..++... +..-.+. +. +-..|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~-L~f~~dG----------vltG~~~P~i 188 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNF-MDFDEDG----------VLKGFKGPLI 188 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeee-EEECCCC----------eEeCCCCCcc
Confidence 4679999999999999999999999999999999999999864432221110 0000000 11 10111
Q ss_pred --hhHHHHHHH-HHhhcC-----CEEEEeCCCCCChHhhhhC---CeeEEecC-CC-c----HHHHhhcCEEeccCCchH
Q 001960 736 --MDKHTLVKH-LRTTLG-----EVVAVTGDGTNDAPALHEA---DIGLAMGI-AG-T----EVAKESADVIILDDNFST 798 (991)
Q Consensus 736 --~~K~~~v~~-l~~~~g-----~~v~~iGDG~ND~~al~~A---dvgiamg~-~g-~----~~ak~~ad~vl~~~~~~~ 798 (991)
..|.+.+.. ..+.++ ..+.++|||.||++|..-. +--+..|- +. . +.-+++=|||+.+|.=..
T Consensus 189 ~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~ 268 (277)
T TIGR01544 189 HTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLE 268 (277)
T ss_pred cccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCch
Confidence 356554432 322223 5788999999999995433 11222231 11 1 225578999999987666
Q ss_pred HHHHH
Q 001960 799 IVTVA 803 (991)
Q Consensus 799 i~~~i 803 (991)
++..|
T Consensus 269 v~~~i 273 (277)
T TIGR01544 269 VANSI 273 (277)
T ss_pred HHHHH
Confidence 66544
No 95
>PTZ00174 phosphomannomutase; Provisional
Probab=97.31 E-value=0.00071 Score=73.10 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCC----CCCChHhhhhC-CeeEEecCCCcHHHHhhcCEE
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVAKESADVI 790 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGD----G~ND~~al~~A-dvgiamg~~g~~~ak~~ad~v 790 (991)
.+|..-++.|.++ .+.|+++|| |.||.+||+.| -.|++++ ++.+..|..+.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 5788888888777 678999999 99999999976 5677777 8888887766544
No 96
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.28 E-value=0.0019 Score=70.74 Aligned_cols=119 Identities=17% Similarity=0.249 Sum_probs=81.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.+...+..+-+.+|+...-..++.+++. + .|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~----------------------~-~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI----------------------L-SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC----------------------C-CCH
Confidence 56899999999999999999999999999999999999986432233333221 0 122
Q ss_pred HHHHHHHhhc---CCEEEEeCCCCCChHhhhhCCeeEE---ecCCCcH-HHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGLA---MGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~---g~~v~~iGDG~ND~~al~~Advgia---mg~~g~~-~ak~~ad~vl~~~~~~~i~~~i 803 (991)
...+.+.++. .+.++||||+.+|..+-++|++-.. -|....+ .....+|+++.+ +..+.+++
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 2333222221 3569999999999999999997643 2311111 234568998844 77777654
No 97
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.18 E-value=0.002 Score=68.25 Aligned_cols=126 Identities=23% Similarity=0.299 Sum_probs=82.0
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
.++.||+.+.++.|++.|+++.++|+-....+..+.+..|+. ..-..++.+.+.. ..+-.|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~----------------~~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA----------------AGRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC----------------CCCCCHH
Confidence 478999999999999999999999999999999999999986 3333344333311 0111222
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEec-CCCc---H-HHHhhcCEEeccCCchHHHHH
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG-IAGT---E-VAKESADVIILDDNFSTIVTV 802 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg-~~g~---~-~ak~~ad~vl~~~~~~~i~~~ 802 (991)
-=....+.+.-...+.++|+||+.+|..+-+.|++..+++ ..|. + .....+|+++.+ +..+..+
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~--~~~l~~~ 218 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDS--VADLPAL 218 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecC--HHHHHHh
Confidence 2122222221110256999999999999999999986322 1222 1 223457887744 6666543
No 98
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.16 E-value=0.0022 Score=67.32 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=74.6
Q ss_pred CCcccHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~-~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..|+..... ++ |-+++.... .++ .-..|..++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~-~i-~t~le~~~g-------g~~-~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN-LI-ASQIERGNG-------GWV-LPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc-EE-EEEeEEeCC-------ceE-cCccCCChHH
Confidence 46899999995 7888999999999999999999999966543222 22 222221000 000 1123666899
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
...++..-....+...+-||+.||.|||+.||.+++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88777543221244567799999999999999999885
No 99
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.16 E-value=0.0024 Score=69.45 Aligned_cols=122 Identities=13% Similarity=0.164 Sum_probs=82.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.....+..+-+.+|+...-..++.+.+.. ...-.|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~----------------~~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY----------------RGKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC----------------CCCCCHHHHH
Confidence 568999999999999999999999999999999999999875444555554421 1122222222
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE-EecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi-amg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
..++.+.-. .+.++||||..+|+.+-+.|++-. ++...........+|+++.+ +..+.
T Consensus 173 ~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 173 YAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 333333322 356999999999999999999843 22212222223457888754 55554
No 100
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.15 E-value=0.0026 Score=68.86 Aligned_cols=120 Identities=15% Similarity=0.125 Sum_probs=82.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+-....+..+-+..|+...-..++.+.+.. ...-.|+--.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~----------------~~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE----------------HAKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC----------------CCCCChHHHH
Confidence 468899999999999999999999999999999999999875434455554421 1122333333
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-e--cCCCcHHHHhhcCEEeccCCchH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIAGTEVAKESADVIILDDNFST 798 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-m--g~~g~~~ak~~ad~vl~~~~~~~ 798 (991)
...+.+.-. .+.++|+||..+|..+-++|++-.. + |....+.....+|+++.+ +..
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 334444333 3668999999999999999997533 2 211112233468888855 544
No 101
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.12 E-value=0.0039 Score=78.05 Aligned_cols=137 Identities=17% Similarity=0.250 Sum_probs=87.0
Q ss_pred CCcccHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCC--ccCCceeee--CcccccC-------------------
Q 001960 660 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGI--LTDNGIAIE--GPEFREK------------------- 715 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~-aGi~v~mlTGD~~~ta~~ia~~~gi--~~~~~~vi~--g~~~~~~------------------- 715 (991)
.+.+++.+++++|.+ .|+.|+++||+............++ ..+++..+. |.+....
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 366889999999999 6999999999999988887765553 222222211 1111000
Q ss_pred ----------------------CH-------HHHhhhc----c--ccceE-------eccChhhHHHHHHHHHhhcC-CE
Q 001960 716 ----------------------SD-------EELSKLI----P--KIQVM-------ARSSPMDKHTLVKHLRTTLG-EV 752 (991)
Q Consensus 716 ----------------------~~-------~~~~~~~----~--~~~v~-------ar~sP~~K~~~v~~l~~~~g-~~ 752 (991)
+. +++.+.+ . .+.+. -+..-.+|...++.+.+..+ ..
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 00 0111111 0 01111 11222689999998887522 57
Q ss_pred EEEeCCCCCChHhhhhC---CeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 753 VAVTGDGTNDAPALHEA---DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 753 v~~iGDG~ND~~al~~A---dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
++++||+.||.+|++.+ +.+|+|| ++ +.+|++.+.+ -..+.+++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~--~~eV~~~L 720 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPS--QREVRELL 720 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCC--HHHHHHHH
Confidence 99999999999999986 6899998 43 5678898875 35555554
No 102
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.10 E-value=0.0032 Score=68.96 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=80.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++-||+.+.++.|++.|+++.++||.....+..+-+..|+.... +.++.+++. .+..|. .
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~------------------~~~KP~-p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDV------------------PAGRPY-P 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcC------------------CCCCCC-h
Confidence 56789999999999999999999999999888888887765421 233333221 111231 1
Q ss_pred HHHHHHHHhhcC----CEEEEeCCCCCChHhhhhCCe---eEEecCCC------------------------cHHHHhhc
Q 001960 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAG------------------------TEVAKESA 787 (991)
Q Consensus 739 ~~~v~~l~~~~g----~~v~~iGDG~ND~~al~~Adv---giamg~~g------------------------~~~ak~~a 787 (991)
.-+.+.+++. | +.++||||+.+|..+-+.|++ |+.-|... .+.....+
T Consensus 162 ~~~~~a~~~l-~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 240 (267)
T PRK13478 162 WMALKNAIEL-GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGA 240 (267)
T ss_pred HHHHHHHHHc-CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCC
Confidence 2233334333 3 469999999999999999996 44444110 12234568
Q ss_pred CEEeccCCchHHHHHH
Q 001960 788 DVIILDDNFSTIVTVA 803 (991)
Q Consensus 788 d~vl~~~~~~~i~~~i 803 (991)
|+++.+ +..+...+
T Consensus 241 ~~vi~~--~~~l~~~l 254 (267)
T PRK13478 241 HYVIDT--IADLPAVI 254 (267)
T ss_pred Ceehhh--HHHHHHHH
Confidence 888854 77777654
No 103
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.09 E-value=0.003 Score=68.56 Aligned_cols=93 Identities=20% Similarity=0.248 Sum_probs=67.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.||+.+.++.|+++|+++.++|+.....+..+-+..|+...- +.++.+.+. .+..|. .
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~------------------~~~KP~-p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDV------------------PAGRPA-P 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccC------------------CCCCCC-H
Confidence 46789999999999999999999999999999999999986531 334443331 111232 1
Q ss_pred HHHHHHHHhhcC----CEEEEeCCCCCChHhhhhCCee
Q 001960 739 HTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 739 ~~~v~~l~~~~g----~~v~~iGDG~ND~~al~~Advg 772 (991)
..+.+.+++. | +.++||||..+|..+-+.|++-
T Consensus 160 ~~~~~a~~~l-~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 160 WMALKNAIEL-GVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHHc-CCCCchheEEECCcHHHHHHHHHCCCe
Confidence 2233334333 3 4589999999999999999964
No 104
>PRK11590 hypothetical protein; Provisional
Probab=97.08 E-value=0.0037 Score=65.82 Aligned_cols=107 Identities=15% Similarity=0.093 Sum_probs=74.5
Q ss_pred CCcccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I-~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
+++|++.+.| +.+++.|++++++|+-...-+..+++.+|+.... .++ |.+++.. .-.++ .-..|..+.|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~~-------~tg~~-~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQRR-------YGGWV-LTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEEE-------EccEE-CCccCCChHH
Confidence 4589999999 5788899999999999999999999999963211 122 2222110 00000 1123666899
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
...++..-........+-||+.||.|||+.|+.+++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 88777543211345567799999999999999999885
No 105
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.07 E-value=0.0015 Score=67.97 Aligned_cols=94 Identities=18% Similarity=0.082 Sum_probs=68.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
.+++.++++++++.|++.|+++.++||.....+..+.+.+|+...-..++.+++ +..+..|+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----------------~~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMED-----------------CPPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecC-----------------CCCCcCHHH
Confidence 455778889999999999999999999999999999999998653333333332 222344544
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhC
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~A 769 (991)
-..+.+.+.-. .+.++||||+.+|+.+-+.|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 44455555444 46799999999999887654
No 106
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.06 E-value=0.0027 Score=68.56 Aligned_cols=69 Identities=22% Similarity=0.260 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEecCCCcHH-----HHh---hcC-EEeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKE---SAD-VIILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiamg~~g~~~-----ak~---~ad-~vl~~~~~~~i~~~i 803 (991)
..|...|+.|+++++ +.|+++||+.||.+||..++-||.+| |+.+. ... ... +.-....-.+|.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 679999999998865 35777899999999999999999999 66655 221 122 333344445666666
Q ss_pred HH
Q 001960 804 KW 805 (991)
Q Consensus 804 ~~ 805 (991)
+|
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 107
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.87 E-value=0.0059 Score=72.31 Aligned_cols=124 Identities=15% Similarity=0.101 Sum_probs=84.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++. -....|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v-----------------~~~~kP~--- 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQI-----------------NSLNKSD--- 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCC-----------------CCCCCcH---
Confidence 67899999999999999999999999999999999999986533344444331 1112332
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecC-CCcHHHHhhcCEEeccCCchHHHHHHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAKW 805 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~-~g~~~ak~~ad~vl~~~~~~~i~~~i~~ 805 (991)
.+...+++...+.+.++||+.+|+.+-+.|++- |.+.. .+.+.....+|+++.+ +..+.+++..
T Consensus 390 ~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILST 455 (459)
T ss_pred HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHHH
Confidence 122223222135699999999999999999974 33321 1222223458998854 7777766543
No 108
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.87 E-value=0.0054 Score=62.23 Aligned_cols=143 Identities=22% Similarity=0.285 Sum_probs=91.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccccc--CCHHHHhhhcccc----------
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE--KSDEELSKLIPKI---------- 727 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~--~~~~~~~~~~~~~---------- 727 (991)
.+-||+.++.+.|++. ...+++|-.-.+-+.++|+.+|+...+- .-+--+++. ..+++.++++.++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~-~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~gee 160 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGEL-HGTEVDLDSIAVPEEEREELLSIIDVIASLSGEE 160 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCcccc-ccccccCccccCChHHHHHHHHhcCccccccHHH
Confidence 4568999999998775 5566777778888999999999964321 111111110 0111111111111
Q ss_pred ------ceEeccChhh---------------HHHHHHHHHhhcC--CEEEEeCCCCCChHhhhhCC-e-eEEecCCCcHH
Q 001960 728 ------QVMARSSPMD---------------KHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD-I-GLAMGIAGTEV 782 (991)
Q Consensus 728 ------~v~ar~sP~~---------------K~~~v~~l~~~~g--~~v~~iGDG~ND~~al~~Ad-v-giamg~~g~~~ 782 (991)
.+|.|..|.+ |+++++.+-+.-+ ...+++||++.|..||+.+. - |+|+.-||.+=
T Consensus 161 lfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 161 LFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc
Confidence 1456666644 4455554443312 34688999999999999884 2 35656689999
Q ss_pred HHhhcCEEeccCCchHHHHHHH
Q 001960 783 AKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 783 ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
|...||+.+...+...+..+|+
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 9999999999888877776654
No 109
>PRK11587 putative phosphatase; Provisional
Probab=96.82 E-value=0.0058 Score=64.69 Aligned_cols=115 Identities=15% Similarity=0.167 Sum_probs=73.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+++|+++.++|+.....+...-+..|+.. ...++.+++.. ...-.|+-=.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~~i~~~~~~~----------------~~KP~p~~~~ 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PEVFVTAERVK----------------RGKPEPDAYL 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-ccEEEEHHHhc----------------CCCCCcHHHH
Confidence 578999999999999999999999988777777667777732 22333332210 0111222222
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEecCCCc-HHHHhhcCEEecc
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT-EVAKESADVIILD 793 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg~~g~-~~ak~~ad~vl~~ 793 (991)
...+.+.-. .+.++||||..+|+.+-+.|++- |++. .+. ......+|+++.+
T Consensus 146 ~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 146 LGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 233333222 36799999999999999999974 4443 332 2233457887654
No 110
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.77 E-value=0.003 Score=67.21 Aligned_cols=88 Identities=19% Similarity=0.243 Sum_probs=63.1
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD----~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
+.+++++.++.++++|+++.++|+. ...++..+.+.+|+......++.++... ...|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-
Confidence 4455999999999999999999998 7779999999999965333333333211 0112
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
+|. ..+++. | .++|+||..||..+-+.|++-
T Consensus 176 ~~~---~~l~~~-~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 TKT---QWIQDK-N-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CHH---HHHHhC-C-CeEEEeCCHHHHHHHHHCCCC
Confidence 232 234443 4 478999999999999999764
No 111
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.67 E-value=0.0091 Score=59.57 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=68.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHc---C--CccCCceee-eCcccccCCHHHHhhhccccc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---G--ILTDNGIAI-EGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~---~ia~~~---g--i~~~~~~vi-~g~~~~~~~~~~~~~~~~~~~ 728 (991)
+|.+.|++++++++++++|++++++||+....+. ....++ | +.. +.++. .|..+..... .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~-g~li~~~g~~~~~~~~----------e 93 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH-GPVLLSPDRLFAALHR----------E 93 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC-ceEEEcCCcchhhhhc----------c
Confidence 5788999999999999999999999999988874 555552 3 321 12222 2222111100 0
Q ss_pred eEeccChh-hHHHHHHHHHhhc----CCEEEEeCCCCCChHhhhhCCee
Q 001960 729 VMARSSPM-DKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 729 v~ar~sP~-~K~~~v~~l~~~~----g~~v~~iGDG~ND~~al~~Advg 772 (991)
+. ...|+ .|...++.+++.+ ...++..||+.+|+.+-++++|.
T Consensus 94 ~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 94 VI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred cc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 22 22343 4888888887732 36778899999999999887654
No 112
>PRK06769 hypothetical protein; Validated
Probab=96.55 E-value=0.0086 Score=60.89 Aligned_cols=137 Identities=16% Similarity=0.020 Sum_probs=74.8
Q ss_pred CCcEEEEEeeccC----CCcccHHHHHHHHHHCCCEEEEEcCCCHH--------HHHHHHHHcCCccCCceeeeCcc-cc
Q 001960 647 EGYTCIGIVGIKD----PMRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAIEGPE-FR 713 (991)
Q Consensus 647 ~~l~~lG~~~i~D----~lr~~v~~~I~~l~~aGi~v~mlTGD~~~--------ta~~ia~~~gi~~~~~~vi~g~~-~~ 713 (991)
.|.++.|-..+.+ ++-||++++++.|++.|+++.++|+.... ......+..|+.. ++.+.. ..
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~----~~~~~~~~~ 86 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD----IYLCPHKHG 86 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE----EEECcCCCC
Confidence 3444544433332 36899999999999999999999987641 2333344556532 111100 00
Q ss_pred cCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCC--cH--------HH
Q 001960 714 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG--TE--------VA 783 (991)
Q Consensus 714 ~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g--~~--------~a 783 (991)
. -.-..+-.|+-=..+.+.+.-. .+.+.||||..+|..+-++|++-...-..| .+ ..
T Consensus 87 ~------------~~~~~KP~p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~ 153 (173)
T PRK06769 87 D------------GCECRKPSTGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWA 153 (173)
T ss_pred C------------CCCCCCCCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccc
Confidence 0 0000112222223333333322 356999999999999999998764422122 21 11
Q ss_pred HhhcCEEeccCCchHHHHH
Q 001960 784 KESADVIILDDNFSTIVTV 802 (991)
Q Consensus 784 k~~ad~vl~~~~~~~i~~~ 802 (991)
...+|+++.+ +..+...
T Consensus 154 ~~~~~~~~~~--~~el~~~ 170 (173)
T PRK06769 154 HIEPNYIAEN--FEDAVNW 170 (173)
T ss_pred cCCCcchhhC--HHHHHHH
Confidence 2346777643 6666543
No 113
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.53 E-value=0.017 Score=65.64 Aligned_cols=121 Identities=16% Similarity=0.185 Sum_probs=82.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+++|+++.++|+.....+..+-+..||...-+.++.+++.. ...-.|+-=.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~----------------~~KP~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY----------------RGKPDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC----------------CCCCCHHHHH
Confidence 467999999999999999999999999999999999999875433444444321 0111222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-ecCCCcHHH-HhhcCEEeccCCchHHH
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTEVA-KESADVIILDDNFSTIV 800 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-mg~~g~~~a-k~~ad~vl~~~~~~~i~ 800 (991)
...+.+.-. .+.++|+||..+|+.|-+.|++-.. +. .+.+.. ...+|+++.+ +..+.
T Consensus 280 ~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s--~~EL~ 338 (381)
T PLN02575 280 YAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRR--LDELS 338 (381)
T ss_pred HHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECC--HHHHH
Confidence 333333323 4679999999999999999997533 22 222222 2358888754 65553
No 114
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.50 E-value=0.011 Score=62.60 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=66.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.|+++.++|+-+...+....+.+|+...-+.++.+.+. .+..|...
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~------------------~~~KP~~~- 154 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEE------------------GVEKPHPK- 154 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccC------------------CCCCCCHH-
Confidence 57899999999999999999999999988888888989986432333333321 12233221
Q ss_pred HHHHHHHhhcC---CEEEEeCCCC-CChHhhhhCCee
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~-ND~~al~~Advg 772 (991)
.+...+++. | +.++++||.. +|+.+-+.|++-
T Consensus 155 ~~~~~~~~~-~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 155 IFYAALKRL-GVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred HHHHHHHHc-CCChhhEEEECCChHHHHHHHHHCCCE
Confidence 122233322 3 5799999998 999999999874
No 115
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=96.43 E-value=0.01 Score=63.94 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=50.1
Q ss_pred ccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhC--------CeeEEecCCCcHHHHhhcCEEeccCCchHHH
Q 001960 732 RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVAKESADVIILDDNFSTIV 800 (991)
Q Consensus 732 r~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~A--------dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~ 800 (991)
+..+.+|...++.+.++++ ..++++||+.||.+|++.+ ..|++|+ .| ..+..|++++.+ ...+.
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~~--~~~v~ 236 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLTG--PQQVL 236 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCCC--HHHHH
Confidence 3445788888888776645 4689999999999999999 5888885 33 235678998864 66666
Q ss_pred HHH
Q 001960 801 TVA 803 (991)
Q Consensus 801 ~~i 803 (991)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 555
No 116
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.43 E-value=0.007 Score=64.40 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=62.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~----~~ta~~ia~~~gi~--~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
.+.|++++.++.+++.|+++.++||+. ..++..+.+..|+. .....++.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 467789999999999999999999964 66999999999994 221222222210
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.-.+|.. .+++. | .++++||..+|..+-+.|++-
T Consensus 173 ~K~~K~~---~l~~~-~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 GQYTKTQ---WLKKK-N-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCHHH---HHHhc-C-CeEEEcCCHHHHHHHHHcCCc
Confidence 0134444 34433 4 488999999999999999865
No 117
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.43 E-value=0.0096 Score=61.87 Aligned_cols=95 Identities=11% Similarity=0.176 Sum_probs=66.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH-
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K- 738 (991)
++.||+.+++++|+++|+++.++|+-+...+..+.+.+|+...-+.++..++. ....|...
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~------------------~~~KP~~~~ 153 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAV------------------RAYKPAPQV 153 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhc------------------CCCCCCHHH
Confidence 46899999999999999999999999999999999999985432233333221 11233211
Q ss_pred -HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 739 -~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
..+.+.+.-. .+.++++||+.+|+.+-+.|++-.
T Consensus 154 ~~~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 154 YQLALEALGVP-PDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcE
Confidence 2222223222 356899999999999999888753
No 118
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.38 E-value=0.015 Score=56.00 Aligned_cols=90 Identities=21% Similarity=0.223 Sum_probs=63.1
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCC--------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceE
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 730 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~--------~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ 730 (991)
-++.|++.++++.|+++|+++.++|+.. ...+.++.+.+|+... ...+.+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~--------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID-VLYACP--------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE-EEEECC---------------------
Confidence 4678999999999999999999999998 7788888898888521 011111
Q ss_pred eccChhhHHHHHHHHHhhc----CCEEEEeCC-CCCChHhhhhCCee
Q 001960 731 ARSSPMDKHTLVKHLRTTL----GEVVAVTGD-GTNDAPALHEADIG 772 (991)
Q Consensus 731 ar~sP~~K~~~v~~l~~~~----g~~v~~iGD-G~ND~~al~~Advg 772 (991)
....| |.++++.+.++. .+.++|+|| ..+|..+-+.|++-
T Consensus 82 ~~~KP--~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 82 HCRKP--KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCC--ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 01122 233333333332 367999999 59999999988764
No 119
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.34 E-value=0.021 Score=58.41 Aligned_cols=127 Identities=17% Similarity=0.130 Sum_probs=70.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
.+.||+.+++++|++.|+++.++|..+. .....+-+..|+.-. .++.......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~~---------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHPE---------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCCC----------
Confidence 3579999999999999999999998762 112223344555211 1111100000
Q ss_pred cccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-ecCCCcH---HHHhhc--CEEeccCCchH
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTE---VAKESA--DVIILDDNFST 798 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-mg~~g~~---~ak~~a--d~vl~~~~~~~ 798 (991)
+..-..+-.|+--..+.+.+.-. .+.++||||+.+|+.+-+.|++..- +. .|.. .....+ |+++.+ +..
T Consensus 97 -~~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~--l~e 171 (181)
T PRK08942 97 -DGCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS--LAD 171 (181)
T ss_pred -CCCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--HHH
Confidence 00001122233323334433322 3679999999999999999997422 22 2221 122335 777744 766
Q ss_pred HHHHH
Q 001960 799 IVTVA 803 (991)
Q Consensus 799 i~~~i 803 (991)
+.+++
T Consensus 172 l~~~l 176 (181)
T PRK08942 172 LPQAL 176 (181)
T ss_pred HHHHH
Confidence 66554
No 120
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.29 E-value=0.0068 Score=62.09 Aligned_cols=92 Identities=12% Similarity=0.182 Sum_probs=61.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.++++.|+++|+++.++|+... +..+.+.+|+...-+.++.+.+. .+..|. ..
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~------------------~~~kp~-p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEI------------------KKGKPD-PE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhc------------------CCCCCC-hH
Confidence 5789999999999999999999997532 45677888886433334433321 122232 11
Q ss_pred HHHHHHHhh--cCCEEEEeCCCCCChHhhhhCCee
Q 001960 740 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 740 ~~v~~l~~~--~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.+-+.+++. ..+.++||||..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 122223322 024689999999999999999875
No 121
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.25 E-value=0.014 Score=62.15 Aligned_cols=94 Identities=12% Similarity=0.097 Sum_probs=66.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+++|+++.++|+-+...+...-+..|+...-..++.+.+. .+..|. -
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~------------------~~~KP~--p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTF------------------GYPKED--Q 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeC------------------CCCCCC--H
Confidence 67899999999999999999999999988888888888886432233333221 122231 2
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi 773 (991)
.+.+...+++| +.++++||..+|+.+-+.|++..
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeE
Confidence 23333222223 56999999999999999999963
No 122
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.22 E-value=0.016 Score=59.07 Aligned_cols=95 Identities=17% Similarity=0.180 Sum_probs=63.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.|++.+.++.|+++|+++.++|+-.... ..+..++|+...-..++.+.+.. ...-.|+-=.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 678999999999999999999999988877 55555688864323333332210 1111222223
Q ss_pred HHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 740 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 740 ~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.+.+.+.-. .+.++++||...|+.+-+++++-
T Consensus 148 ~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LALKKLGLK-PEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCE
Confidence 333333323 46799999999999998888763
No 123
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.15 E-value=0.013 Score=57.92 Aligned_cols=99 Identities=22% Similarity=0.225 Sum_probs=71.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC----CccC----Ccee--eeCcccccCCHHHHhhhccccce
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTD----NGIA--IEGPEFREKSDEELSKLIPKIQV 729 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g----i~~~----~~~v--i~g~~~~~~~~~~~~~~~~~~~v 729 (991)
.++|+.++.++.+++.++.++++|+-...-...+-...+ |..- ++.. .+|...- +
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i---------------~ 137 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSI---------------K 137 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceee---------------e
Confidence 468999999999999999999999988777777777665 2110 0001 1111100 1
Q ss_pred EeccCh--hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 730 MARSSP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 730 ~ar~sP--~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
....+| .+|...|+.+++. .+.+.++|||+.|.+|-+.+|+=+|
T Consensus 138 ~~~ds~fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 138 YTDDSQFGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCccccCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 111122 5899999999988 8889999999999999998888774
No 124
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.11 E-value=0.019 Score=60.82 Aligned_cols=120 Identities=14% Similarity=0.122 Sum_probs=76.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH-
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K- 738 (991)
++.||+.+.++.|++. +++.++|+-....+..+.+..|+...-+.++.+.+. ....|...
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~------------------~~~KP~~~~ 157 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDA------------------GIQKPDKEI 157 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCcc------------------CCCCCCHHH
Confidence 5689999999999999 999999999999999999999986432233332221 11123221
Q ss_pred -HHHHHHH-HhhcCCEEEEeCCCC-CChHhhhhCCeeE-EecC-CCcHHHHhhcCEEeccCCchHHHH
Q 001960 739 -HTLVKHL-RTTLGEVVAVTGDGT-NDAPALHEADIGL-AMGI-AGTEVAKESADVIILDDNFSTIVT 801 (991)
Q Consensus 739 -~~~v~~l-~~~~g~~v~~iGDG~-ND~~al~~Advgi-amg~-~g~~~ak~~ad~vl~~~~~~~i~~ 801 (991)
...++.+ .-. .+.+++|||+. +|+.+-+.+++-. ...- ...+.....+|+++.+ +..+..
T Consensus 158 ~~~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRS--LEELYE 222 (224)
T ss_pred HHHHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECC--HHHHHh
Confidence 2233333 212 35699999998 8999999999632 2221 1121222356777643 665554
No 125
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.07 E-value=0.013 Score=65.26 Aligned_cols=109 Identities=13% Similarity=-0.001 Sum_probs=75.8
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
..+++.|++.+.++.|++.|+++.++||.....+..+.+.+|+....-..+.|.+. ....+++. --.+-.|+
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~---~~~~~~~~-----~~~kp~p~ 255 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP---DMHFQREQ-----GDKRPDDV 255 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc---hhhhcccC-----CCCCCcHH
Confidence 57899999999999999999999999999999999999999886311011111110 00000000 01244566
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
-+...++.+.....+.++|+||..+|+.+-+.|++-.
T Consensus 256 ~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 256 VKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 7777766653311378999999999999999999874
No 126
>PLN02580 trehalose-phosphatase
Probab=96.07 E-value=0.055 Score=61.44 Aligned_cols=64 Identities=22% Similarity=0.271 Sum_probs=48.1
Q ss_pred hhHHHHHHHHHhhcC-----C-EEEEeCCCCCChHhhhh-----CCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG-----E-VVAVTGDGTNDAPALHE-----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 804 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g-----~-~v~~iGDG~ND~~al~~-----Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~ 804 (991)
.+|...|+.+.+.+| . .++++||+.||..|++. +++||+|| +|... -.|++.+.+ -..+...++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHHH
Confidence 499999999887755 1 25899999999999996 68999999 55432 357888755 666665553
No 127
>PRK09449 dUMP phosphatase; Provisional
Probab=96.01 E-value=0.027 Score=59.70 Aligned_cols=121 Identities=15% Similarity=0.151 Sum_probs=76.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|+ +|+++.++|......+...-+..|+...-+.++.+.+. ....|.. .
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~p-~ 154 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQV------------------GVAKPDV-A 154 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECcc------------------CCCCCCH-H
Confidence 46899999999999 68999999999988888888888885422233322221 0112321 1
Q ss_pred HHHHHHHhhcC----CEEEEeCCCC-CChHhhhhCCeeE-EecCCCcH-HHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIGL-AMGIAGTE-VAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~~g----~~v~~iGDG~-ND~~al~~Advgi-amg~~g~~-~ak~~ad~vl~~~~~~~i~~~i 803 (991)
-+...+++. | +.+++|||+. +|+.+-+.|++-. .....+.+ .....+|+++.+ +..+..++
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQM-GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHHHHc-CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 222223322 3 4699999998 7999999999853 33211211 111247888744 77766544
No 128
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.94 E-value=0.013 Score=59.87 Aligned_cols=92 Identities=17% Similarity=0.216 Sum_probs=62.1
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
-++.||+.+.++.|++.|+++.++|+. ..+..+.+.+|+...-..++.+.+. .+..|..
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~------------------~~~kp~~- 145 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEV------------------KEGKPHP- 145 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhC------------------CCCCCCh-
Confidence 367999999999999999999999987 5677788888885422222222211 1123322
Q ss_pred HHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCee
Q 001960 739 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 739 ~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advg 772 (991)
.+.+...+++| +.+++|||+.+|+.+-+.|++.
T Consensus 146 -~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 146 -ETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred -HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 12222222213 5688999999999999999875
No 129
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.88 E-value=0.043 Score=55.59 Aligned_cols=113 Identities=11% Similarity=0.088 Sum_probs=72.7
Q ss_pred cEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcccc
Q 001960 649 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 727 (991)
Q Consensus 649 l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~ 727 (991)
.......+-+-++.||+.+.++.|+++|+++.++|+- ....+..+...+|+..... .. .+...+..
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~------~~------~~~~~Fd~- 100 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK------TV------PMHSLFDD- 100 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC------cc------cHHHhcee-
Confidence 3455556667788999999999999999999999976 8889999999999851100 00 00000000
Q ss_pred ceEeccChhhH--HHHHHHHHhhc-----CCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 728 QVMARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 728 ~v~ar~sP~~K--~~~v~~l~~~~-----g~~v~~iGDG~ND~~al~~Advgia 774 (991)
.+.+...+..| ..+.+.+.+.. .+.++|+||...|+.+-++|++-..
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 02221111112 23344444321 2579999999999999999988654
No 130
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.82 E-value=0.012 Score=59.20 Aligned_cols=98 Identities=20% Similarity=0.270 Sum_probs=68.5
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..++.|++.+.++.|++.|++++++|+..........+.+|+...-..++...+... ....|+-
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~----------------~Kp~~~~ 138 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS----------------RKPDPDA 138 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS----------------STTSHHH
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh----------------hhhHHHH
Confidence 446789999999999999999999999999999999999998743223333322110 1111222
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg 772 (991)
=..+++.+.-. .+.+++|||+..|+.+-+.|++-
T Consensus 139 ~~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 139 YRRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCe
Confidence 22333333322 46799999999999999998865
No 131
>PLN02940 riboflavin kinase
Probab=95.79 E-value=0.03 Score=64.51 Aligned_cols=116 Identities=17% Similarity=0.148 Sum_probs=73.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-HcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~-~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.||+.+.++.|++.|+++.++|+.....+....+ ..|+...-+.++.+++.. ...-.|+-=
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~----------------~~KP~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE----------------KGKPSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC----------------CCCCCHHHH
Confidence 467999999999999999999999999888877665 678754333444433311 111122222
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE-ecCCCc--HHHHhhcCEEecc
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT--EVAKESADVIILD 793 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia-mg~~g~--~~ak~~ad~vl~~ 793 (991)
....+.+.-. .+.++|+||+.+|+.+-+.|++... +. .+. +.....+|.++.+
T Consensus 157 ~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 157 LEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC
Confidence 2333333222 3679999999999999999997633 32 222 2233446666543
No 132
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.73 E-value=0.038 Score=61.06 Aligned_cols=122 Identities=16% Similarity=0.133 Sum_probs=74.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccC-C-ceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-N-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~-~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
++.||+.+.++.|++.|+++.++|+-+......+-+..+.... . -.++.+.+.. ..+-.|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 5789999999999999999999999988888777665532211 1 0122222210 01122222
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcH--HHHhhcCEEeccCCchHHH
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILDDNFSTIV 800 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~--~ak~~ad~vl~~~~~~~i~ 800 (991)
=..+.+.+.-. .+.++||||+.+|+.+-+.|++....-..|.. .....+|+++.+ +..+.
T Consensus 208 ~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~--~~~l~ 269 (286)
T PLN02779 208 YNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC--LGDVP 269 (286)
T ss_pred HHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC--hhhcc
Confidence 23333333322 35699999999999999999977543223321 112358888744 54444
No 133
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.70 E-value=0.045 Score=58.01 Aligned_cols=112 Identities=23% Similarity=0.355 Sum_probs=74.3
Q ss_pred CCcccHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccc-cceEeccCh-
Q 001960 660 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK-IQVMARSSP- 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l--~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~-~~v~ar~sP- 735 (991)
|+.|+.++.++.+ ++.|+.+.++|.-|..-...+-+.-|+...-..+.+.+..-+-. -.-.+.+. ..-|.+|.|
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~--G~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDAD--GRLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCC--ceEEEeCccCCCCCcCCCc
Confidence 6788999999999 56899999999999999999999999864333344433211000 00000010 012445555
Q ss_pred hhHHHHHHHHHhh---cC---CEEEEeCCCCCC-hHhhh--hCCeeE
Q 001960 736 MDKHTLVKHLRTT---LG---EVVAVTGDGTND-APALH--EADIGL 773 (991)
Q Consensus 736 ~~K~~~v~~l~~~---~g---~~v~~iGDG~ND-~~al~--~Advgi 773 (991)
.=|..+++.+++. .| +.|.++|||.|| +|+++ .+|+-+
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 4799999988765 13 689999999999 55543 455544
No 134
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.38 E-value=0.044 Score=54.30 Aligned_cols=89 Identities=18% Similarity=0.267 Sum_probs=57.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
+..+|+.+.++.|++.|+++.++|+-....+....+.. +...-..++...+ +. ..| +.
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~--~Kp--~~ 121 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FG--AKP--EP 121 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CC--CCc--CH
Confidence 34579999999999999999999999999888887775 4322111221111 11 122 12
Q ss_pred HHHHHHHhhcC--CEEEEeCCCCCChHhhhhCC
Q 001960 740 TLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 740 ~~v~~l~~~~g--~~v~~iGDG~ND~~al~~Ad 770 (991)
.....+.+++| ..++++||..+|..+-+.|+
T Consensus 122 ~~~~~~~~~~~~~~~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 122 EIFLAALESLGLPPEVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHcc
Confidence 23333222223 26899999999999887764
No 135
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=95.36 E-value=0.14 Score=64.68 Aligned_cols=45 Identities=18% Similarity=0.231 Sum_probs=35.6
Q ss_pred CCcccHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc---CCccCCc
Q 001960 660 PMRPGVKESVAIC-RSAGITVRMVTGDNINTAKAIAREC---GILTDNG 704 (991)
Q Consensus 660 ~lr~~v~~~I~~l-~~aGi~v~mlTGD~~~ta~~ia~~~---gi~~~~~ 704 (991)
.+-++..+++++| ++.|+.|+++||+...+.......+ ++..+++
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG 664 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHG 664 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCC
Confidence 5567899999997 7789999999999999998887553 4444443
No 136
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.32 E-value=0.13 Score=50.54 Aligned_cols=110 Identities=17% Similarity=0.267 Sum_probs=77.0
Q ss_pred HHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Q 001960 616 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR 695 (991)
Q Consensus 616 ~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~ 695 (991)
.+.+..+|++.+.+- + |-|+++.= ....-|++++=+.+++++|+++.++|.-++..+...+.
T Consensus 20 ~~~L~~~Gikgvi~D---l-------------DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~ 81 (175)
T COG2179 20 PDILKAHGIKGVILD---L-------------DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAE 81 (175)
T ss_pred HHHHHHcCCcEEEEe---c-------------cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhh
Confidence 356778899988763 2 22333321 34566888999999999999999999999999999999
Q ss_pred HcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhh--cCCEEEEeCCCC-CChHhhhhCCe
Q 001960 696 ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADI 771 (991)
Q Consensus 696 ~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~--~g~~v~~iGDG~-ND~~al~~Adv 771 (991)
.+|+.- ++--..|.-+ .+-+++++. ..+.|+||||-. .|+-+=+.|++
T Consensus 82 ~l~v~f---------------------------i~~A~KP~~~-~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 82 KLGVPF---------------------------IYRAKKPFGR-AFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred hcCCce---------------------------eecccCccHH-HHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 999963 3333345443 455666654 136899999984 47666555543
No 137
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.20 E-value=0.03 Score=55.36 Aligned_cols=95 Identities=17% Similarity=-0.003 Sum_probs=67.2
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
..-++|||+.+.++.|+ .++++.++|.-+...+..+-+.+|+...- ..++.+++.. +..|
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP 102 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKG 102 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCC
Confidence 34467999999999999 57999999999999999999999884321 2334333311 1123
Q ss_pred hhHHHHHHHHHhh--cCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 736 MDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 736 ~~K~~~v~~l~~~--~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
. +.+.++.. ..+.+.++||..+|..+-++|+|-|.
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 2 34444332 13679999999999999888876663
No 138
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.18 E-value=0.15 Score=52.09 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=33.9
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 664 ~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
.+.+.+.+|+++|+.|+.+|.-....-...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678899999999999999999999999999999986
No 139
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.12 E-value=0.052 Score=53.51 Aligned_cols=97 Identities=26% Similarity=0.354 Sum_probs=60.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
++.||+.++++.|++.|+++.++|..+. ..+..+.+.+|+... ...........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~~---------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPAD---------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCCC----------
Confidence 4789999999999999999999998762 455667778887521 00110000000
Q ss_pred cccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi 773 (991)
.... ..| |.++.+...++.| +.++||||...|..+-+.+++-.
T Consensus 96 ---~~~~-~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 96 ---NCSC-RKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred ---CCCC-CCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 0000 123 2333333333324 56999999999999998887753
No 140
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.10 E-value=0.077 Score=53.73 Aligned_cols=86 Identities=20% Similarity=0.238 Sum_probs=60.8
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~-~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..+-|+++++++.|++.|+++.++|+.+ ...+..+.+.+|+.. ......|..
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p 94 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPG 94 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCCh
Confidence 3678999999999999999999999988 677788888888742 111123322
Q ss_pred HHHHHHHHHhh--cCCEEEEeCCCC-CChHhhhhCCee
Q 001960 738 KHTLVKHLRTT--LGEVVAVTGDGT-NDAPALHEADIG 772 (991)
Q Consensus 738 K~~~v~~l~~~--~g~~v~~iGDG~-ND~~al~~Advg 772 (991)
. .+...+++. ..+.++||||.. .|..+-+.|++-
T Consensus 95 ~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 95 C-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred H-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 1 222223322 035699999998 799999999874
No 141
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=95.06 E-value=0.082 Score=53.86 Aligned_cols=125 Identities=19% Similarity=0.171 Sum_probs=65.6
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 725 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~---------------~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~ 725 (991)
+.||+.++++.|+++|+++.++|.-+. .....+..+.|+.-. .++.......-. .++ .
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~~~~~~~~-~~~----~ 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD--GIYYCPHHPEGV-EEF----R 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc--EEEECCCCCccc-ccc----c
Confidence 578999999999999999999998763 111223333443211 111000000000 000 0
Q ss_pred ccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeE--EecCCCcH---HHHhhcCEEeccCCch
Q 001960 726 KIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL--AMGIAGTE---VAKESADVIILDDNFS 797 (991)
Q Consensus 726 ~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgi--amg~~g~~---~ak~~ad~vl~~~~~~ 797 (991)
.-.....|.- ..+...+++. | +.++||||..+|+.+-++|++.. ... .|.. .....+|+++.+ +.
T Consensus 100 --~~~~~~KP~p-~~~~~a~~~~-~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~--~~ 172 (176)
T TIGR00213 100 --QVCDCRKPKP-GMLLQARKEL-HIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS--LA 172 (176)
T ss_pred --CCCCCCCCCH-HHHHHHHHHc-CcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc--HH
Confidence 0001112321 1222333322 4 56889999999999999999853 332 3322 122348888844 55
Q ss_pred HH
Q 001960 798 TI 799 (991)
Q Consensus 798 ~i 799 (991)
.+
T Consensus 173 el 174 (176)
T TIGR00213 173 DL 174 (176)
T ss_pred Hh
Confidence 44
No 142
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=94.96 E-value=0.065 Score=55.82 Aligned_cols=92 Identities=16% Similarity=0.229 Sum_probs=59.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++-||+.++++.|+++|+++.++|+-... .....+.+|+...-+.++...+. ....|.. .
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~------------------~~~KP~~-~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEV------------------GAEKPDP-K 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeeccc------------------CCCCCCH-H
Confidence 57799999999999999999999986654 46677778875322222222211 1112221 1
Q ss_pred HHHHHHHhhcC---CEEEEeCCCC-CChHhhhhCCee
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIG 772 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~-ND~~al~~Advg 772 (991)
-+.+.+++. | +.+++|||+. +|+.+-++|++-
T Consensus 165 ~~~~~~~~~-~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 165 IFQEALERA-GISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHc-CCChhHEEEECCCchHHHHHHHHcCCe
Confidence 222223322 3 6799999997 899998888753
No 143
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.78 E-value=0.12 Score=54.52 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=58.8
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
+-|.-|++.+.++.+++.|++|+++||+.... +..--++.|+..-..+++.+.+-. ....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~-----------------~~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS-----------------NKTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC-----------------CchH
Confidence 44778999999999999999999999999765 334445578764233333321100 0001
Q ss_pred hhhHHHHHHHHHhhcC-CEEEEeCCCCCCh
Q 001960 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g-~~v~~iGDG~ND~ 763 (991)
-+-|...-+.+.+. | .+++.+||-.+|.
T Consensus 181 ~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 12266666667666 6 5889999999886
No 144
>PLN02811 hydrolase
Probab=94.57 E-value=0.089 Score=55.70 Aligned_cols=97 Identities=16% Similarity=0.236 Sum_probs=59.5
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHcCCccCCceeeeCc--ccccCCHHHHhhhccccceEeccChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~-ia~~~gi~~~~~~vi~g~--~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
++.||+.+.++.|++.|+++.++||-....... +.+..|+...-..++.+. +.. ...-.|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhcc----------------CCCCCcH
Confidence 568999999999999999999999987654432 222234432212233332 110 0111222
Q ss_pred hHHHHHHHHH---hhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~---~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
-=...++.+. -. .+.++||||+..|+.+-+.|++-.
T Consensus 142 ~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 142 IFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCeE
Confidence 2233333332 11 367999999999999999999764
No 145
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.47 E-value=0.15 Score=55.38 Aligned_cols=87 Identities=13% Similarity=0.180 Sum_probs=60.6
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
..++-||+.+.++.+++.|+++.++|+.... .+....+..|+...... .++.|-.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d----------------------~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE----------------------HLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc----------------------eEEeCCC
Confidence 4567899999999999999999999998743 34455667888532100 0333333
Q ss_pred hhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhh
Q 001960 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 767 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~ 767 (991)
...|....+.+.+. -.+++++||-.+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 33566666666555 577999999999986543
No 146
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.41 E-value=0.21 Score=53.81 Aligned_cols=94 Identities=16% Similarity=0.185 Sum_probs=60.7
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCceeeeCcccccCCHHHHhhhccccce
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 729 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~--~ia~~~gi~~-~~~~vi~g~~~~~~~~~~~~~~~~~~~v 729 (991)
|.+.-.+.+-|+++++++.|+++|+++.++|.-....+. ...+++|+.. ....+++..+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~------------------ 78 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGE------------------ 78 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHH------------------
Confidence 444456778999999999999999999999996554444 5668889864 2222222211
Q ss_pred EeccChhhHHHHHHHHHhh--cCCEEEEeCCCCCChHhhhhCC
Q 001960 730 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 730 ~ar~sP~~K~~~v~~l~~~--~g~~v~~iGDG~ND~~al~~Ad 770 (991)
.....+.+.+++. .+..+.++||+.+|...+..++
T Consensus 79 ------~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 79 ------IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ------HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0111222222221 1467999999999998886443
No 147
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=94.08 E-value=0.089 Score=52.73 Aligned_cols=98 Identities=21% Similarity=0.188 Sum_probs=61.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 724 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~ 724 (991)
++-||+.+++++|+++|+++.++|.- ....+..+.+..|+.- . .++.+.....
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-d-~ii~~~~~~~---------- 96 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF-D-DVLICPHFPD---------- 96 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce-e-EEEECCCCCC----------
Confidence 45689999999999999999999985 2446677777888741 1 1221100000
Q ss_pred cccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEE
Q 001960 725 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 725 ~~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgia 774 (991)
-.... ..|. ..+++.+.+++| +.+.||||+.+|..+-+.|++-..
T Consensus 97 --~~~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 97 --DNCDC-RKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred --CCCCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00111 1222 333333333323 469999999999999999987754
No 148
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=93.86 E-value=0.23 Score=64.59 Aligned_cols=115 Identities=17% Similarity=0.197 Sum_probs=77.1
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc-cCCceeeeCcccccCCHHHHhhhccccceEeccChh--
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~-~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-- 736 (991)
.+.||+.+.++.|+++|+++.++|+-....+..+-+..|+. ..-+.++.+.+. .+..|.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~------------------~~~KP~Pe 222 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAF------------------ENLKPAPD 222 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECccc------------------ccCCCCHH
Confidence 35799999999999999999999999999999998999985 222234433331 122332
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCee-EEec--CCCcHHHHhhcCEEecc
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMG--IAGTEVAKESADVIILD 793 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advg-iamg--~~g~~~ak~~ad~vl~~ 793 (991)
-=....+.+.-. .+.++++||..+|+.+-+.|++- |.+. ....+.....+|+++.+
T Consensus 223 ~~~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 223 IFLAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 222333333322 36799999999999999999974 3332 11122344568888855
No 149
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.74 E-value=0.14 Score=57.80 Aligned_cols=99 Identities=23% Similarity=0.201 Sum_probs=61.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 723 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD---------------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~ 723 (991)
-++.|++.++++.|+++|+++.++|+- ....+..+.+..|+.- +..++......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~sd--------- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPED--------- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCcc---------
Confidence 467899999999999999999999983 2334666777777742 111121100000
Q ss_pred ccccceEeccChhhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEE
Q 001960 724 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 724 ~~~~~v~ar~sP~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgia 774 (991)
. ..+| .| |..++..+.++.+ +.+.||||+.+|..+-+.|++-..
T Consensus 99 --~--~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --N--CSCR-KP--KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --c--CCCC-CC--CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 1111 22 2333433333322 679999999999999999988743
No 150
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=93.70 E-value=0.19 Score=50.60 Aligned_cols=91 Identities=12% Similarity=0.163 Sum_probs=57.8
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHH------------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNIN------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~------------ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (991)
+-||+.++++.|+++|+++.++|.-... .+..+.+.+|+.. ..++.+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~----------------- 103 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHA----------------- 103 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCC-----------------
Confidence 3499999999999999999999975542 4566778888743 22222211
Q ss_pred eEeccChhhHHHHHHHHHhhcC-----CEEEEeCCCC--------CChHhhhhCCeeE
Q 001960 729 VMARSSPMDKHTLVKHLRTTLG-----EVVAVTGDGT--------NDAPALHEADIGL 773 (991)
Q Consensus 729 v~ar~sP~~K~~~v~~l~~~~g-----~~v~~iGDG~--------ND~~al~~Advgi 773 (991)
...| .|. ..+++.+.+++| +.+.||||.. +|..+-++|++-.
T Consensus 104 ~~~~-KP~--p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLYR-KPM--TGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCC-CCc--cHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 0011 222 122222222223 5699999986 6999988887654
No 151
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.56 E-value=0.16 Score=48.70 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=35.0
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcC
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 698 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD-~~~ta~~ia~~~g 698 (991)
++.||+.+.++.|+++|+++.++|+. ....+..+.+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777777766
No 152
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=93.27 E-value=0.089 Score=55.63 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=62.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccChhhH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K 738 (991)
++.||+++.++.| ++++.++|+.....+...-+..|+...- ..++++.+.. ..+-.|+-=
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~----------------~~KP~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ----------------RWKPDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC----------------CCCCChHHH
Confidence 4568999999988 5999999999988888888888886431 1233332211 001112222
Q ss_pred HHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 739 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 739 ~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiam 775 (991)
....+.+.-. .+.+++|||..+|..+=+.|++....
T Consensus 149 ~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 149 FHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 2222222211 25689999999999999999987653
No 153
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=93.00 E-value=0.87 Score=49.47 Aligned_cols=48 Identities=29% Similarity=0.400 Sum_probs=36.9
Q ss_pred EEeeccCC----CcccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCc
Q 001960 653 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGIL 700 (991)
Q Consensus 653 G~~~i~D~----lr~~v~~~I~~l~~aGi~v~mlTGD~~~t---a~~ia~~~gi~ 700 (991)
|.+.-.+. +=|++.++|++|+++|++++++||....+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 34444455 78899999999999999999999977664 55555667875
No 154
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=92.89 E-value=0.39 Score=50.74 Aligned_cols=98 Identities=11% Similarity=0.146 Sum_probs=63.6
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC---CccCCceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~g---i~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
+-++.||+.+++++|+++|+++.++|..+......+-+..+ +..- + ...+. ..+...-.
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~----f-------------~~~fd-~~~g~KP~ 154 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY----F-------------SGYFD-TTVGLKTE 154 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh----c-------------ceEEE-eCcccCCC
Confidence 45789999999999999999999999998877777666542 2110 0 00111 01111222
Q ss_pred hhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 735 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
|+-=..+.+.+.-. .+.++++||...|+.+-++|++-..
T Consensus 155 p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 155 AQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 22223333333322 3679999999999999999998654
No 155
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=92.86 E-value=0.13 Score=54.00 Aligned_cols=98 Identities=13% Similarity=0.125 Sum_probs=56.5
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 736 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t--a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~ 736 (991)
-++.|++.+.++.|+++|+++.++|...... ........|+...-+.++...+. -...-.|+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~----------------~~~KP~p~ 156 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLE----------------GLRKPDPR 156 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeec----------------CCCCCCHH
Confidence 3678999999999999999999999875432 22222233442211112111110 00111222
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
-=..+.+.+.-. .+.++||||...|+.+-++|++-.
T Consensus 157 ~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 157 IYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCEE
Confidence 212222333222 356888999999999999998753
No 156
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.83 E-value=0.23 Score=55.81 Aligned_cols=91 Identities=10% Similarity=0.116 Sum_probs=69.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~----~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
++.+++.++++.|++.|+.+.++|.-+...+..+.+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 4578999999999999999999999999999999888 7765310 1112224
Q ss_pred hhHHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 736 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advgiam 775 (991)
..|...++.+.+++| ..++|+||...|..+.+.+...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 456666665554434 6799999999999999998877644
No 157
>PLN03017 trehalose-phosphatase
Probab=92.82 E-value=1.7 Score=49.24 Aligned_cols=63 Identities=21% Similarity=0.253 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHhhcC------CEEEEeCCCCCChHhhhhC-----CeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g------~~v~~iGDG~ND~~al~~A-----dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
-+|...++.|.+.+| ..++++||...|-.|++.. ++||.+|.... ...|++.+.+ ...+...+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~y~L~d--p~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDASYSLQD--PSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcceEeCCC--HHHHHHHH
Confidence 489999988877544 2588999999999998865 47777772111 2558888844 66666554
No 158
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=92.78 E-value=0.17 Score=46.34 Aligned_cols=89 Identities=22% Similarity=0.306 Sum_probs=54.2
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCccCCceeeeCcccccCCHHHHhhhccccce
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 729 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v 729 (991)
|++...+.+=||+.++|+.|+++|++++++|.....+...++ +.+|+....+. +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-----------------------i 63 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-----------------------I 63 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-----------------------E
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-----------------------E
Confidence 445557788899999999999999999999998755544444 66787643211 2
Q ss_pred EeccChhhHHHHHHHHHh-hcCCEEEEeCCCCCChHhhhhCC
Q 001960 730 MARSSPMDKHTLVKHLRT-TLGEVVAVTGDGTNDAPALHEAD 770 (991)
Q Consensus 730 ~ar~sP~~K~~~v~~l~~-~~g~~v~~iGDG~ND~~al~~Ad 770 (991)
+... ....+.|++ ..+..|.++|.. .....++.++
T Consensus 64 ~ts~-----~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G 99 (101)
T PF13344_consen 64 ITSG-----MAAAEYLKEHKGGKKVYVLGSD-GLREELREAG 99 (101)
T ss_dssp EEHH-----HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTT
T ss_pred EChH-----HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcC
Confidence 2211 123344554 236788888865 4455555554
No 159
>PLN02423 phosphomannomutase
Probab=91.75 E-value=0.75 Score=49.57 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCC----CCCChHhhhh-CCeeEEec
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 776 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGD----G~ND~~al~~-Advgiamg 776 (991)
.+|...++.|+ . .+.|+++|| |.||.+||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 67888888888 4 677899999 8999999997 55778774
No 160
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.63 E-value=0.97 Score=44.70 Aligned_cols=103 Identities=20% Similarity=0.249 Sum_probs=70.6
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHHc-----CCccCCceeeeCcc--cccCCHHHHhhhcccc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA---IAREC-----GILTDNGIAIEGPE--FREKSDEELSKLIPKI 727 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~---ia~~~-----gi~~~~~~vi~g~~--~~~~~~~~~~~~~~~~ 727 (991)
+|..++++.+..+.+++.|++++.+|++..--+.. .-.+. ++. .+.++..++ +..+..
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~~l~~al~r---------- 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPDSLFSALHR---------- 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCcchhhhhhc----------
Confidence 47999999999999999999999999999654433 33333 432 222332211 111111
Q ss_pred ceEeccChhhHHHHHHHHHhh----cCCEEEEeCCCCCChHhhhhCCee
Q 001960 728 QVMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 728 ~v~ar~sP~~K~~~v~~l~~~----~g~~v~~iGDG~ND~~al~~Advg 772 (991)
.+..+-.-+.|...++.++.. .....+..|...+|+.+-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 144555557899999999875 235788899999999999987665
No 161
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=91.55 E-value=0.33 Score=50.40 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=57.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhccccceEeccChh--
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-- 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~-- 736 (991)
++.||+.++++.|+++|+++.++|.-+.......... .++...-+.++...+ +....|.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~------------------~~~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQD------------------LGMRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecc------------------cCCCCCCHH
Confidence 4689999999999999999999999876654433222 233221111222111 1111232
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
-=..+.+.+.-. .+.++++||...|+.+-++|++-.
T Consensus 146 ~~~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 146 IYQHVLQAEGFS-AADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEE
Confidence 112222333222 356899999999999999988754
No 162
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=91.45 E-value=0.28 Score=50.28 Aligned_cols=121 Identities=21% Similarity=0.270 Sum_probs=72.6
Q ss_pred CCcccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcc--ccceEeccCh-
Q 001960 660 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP--KIQVMARSSP- 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi-~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~--~~~v~ar~sP- 735 (991)
|+-|+..++|+.+++.|- .++++|--|..-...+-+..|+..--..+.+.+.--+- .-.-.+.+ .-.-|.+|.|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da--~G~L~v~pyH~~hsC~~CPsN 161 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA--SGRLLVRPYHTQHSCNLCPSN 161 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC--CCcEEeecCCCCCccCcCchh
Confidence 667899999999999997 99999999998888888888875210001110000000 00000000 0012333333
Q ss_pred hhHHHHHHHHHhhc---C---CEEEEeCCCCCC-hHhhhhCCeeEEecCCCcHH
Q 001960 736 MDKHTLVKHLRTTL---G---EVVAVTGDGTND-APALHEADIGLAMGIAGTEV 782 (991)
Q Consensus 736 ~~K~~~v~~l~~~~---g---~~v~~iGDG~ND-~~al~~Advgiamg~~g~~~ 782 (991)
.=|..++..++... | +.+..+|||.|| +|+++...--+||--.|-+.
T Consensus 162 mCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 162 MCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred hhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 34666666665430 2 378999999999 78887777667775455444
No 163
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=89.69 E-value=0.77 Score=46.90 Aligned_cols=93 Identities=10% Similarity=-0.012 Sum_probs=62.2
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEec---cChh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR---SSPM 736 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar---~sP~ 736 (991)
++.+++.+++++|+ .++.++|.-+...+..+.+..|+...-+.++.+++. -.+ ..|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~-----------------~~~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTA-----------------NPDYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecc-----------------cCccCCCCCC
Confidence 46789999999997 478999999999999999999986432233333221 111 2332
Q ss_pred h--HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 737 D--KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 737 ~--K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
. =..+++.+... .+.++|+||...|+.+=+.|++..
T Consensus 144 p~~~~~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 144 PQAYEKALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 2 22333333323 366889999999999988887653
No 164
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=89.35 E-value=0.76 Score=47.01 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=61.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHH
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 741 (991)
-|+ .+.++.|++. ++..++||.....+..+-+..|+...-+.++.+++.. ..+-.|+-=...
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~p~~~~~~ 151 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ----------------HHKPAPDTFLRC 151 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc----------------CCCCChHHHHHH
Confidence 344 5899999875 8999999999999999999999864323344333211 011122222233
Q ss_pred HHHHHhhcCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 742 VKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 742 v~~l~~~~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
.+.+.-. .+.+.++||..+|+.+-+.|++-.
T Consensus 152 ~~~~~~~-~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 152 AQLMGVQ-PTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHcCCC-HHHeEEEeccHhhHHHHHHCCCEE
Confidence 3333222 245889999999999999998753
No 165
>PRK10444 UMP phosphatase; Provisional
Probab=89.20 E-value=1.6 Score=47.15 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=40.3
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 700 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~---~gi~ 700 (991)
|.+.-.+.+-|++.++++.|+++|++++++|+....+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555678889999999999999999999999998887777776 4664
No 166
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=88.97 E-value=0.45 Score=50.63 Aligned_cols=91 Identities=22% Similarity=0.289 Sum_probs=59.4
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
+++.=|++.+.++.+++.|++|+++||++.. ....--++.|....+.+++.+..-.. ....
T Consensus 113 ~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~----------------~~~~ 176 (229)
T PF03767_consen 113 KAPAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPS----------------KKSA 176 (229)
T ss_dssp GGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTS----------------S---
T ss_pred cCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccc----------------cccc
Confidence 3466688999999999999999999998854 33333455676543333333322100 0012
Q ss_pred hhhHHHHHHHHHhhcC-CEEEEeCCCCCChHh
Q 001960 735 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 765 (991)
Q Consensus 735 P~~K~~~v~~l~~~~g-~~v~~iGDG~ND~~a 765 (991)
.+-|...-+.++++ | ++++.+||-.+|..-
T Consensus 177 ~~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 177 VEYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ---SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred cccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 23477778888877 6 688999999999876
No 167
>PLN02645 phosphoglycolate phosphatase
Probab=88.95 E-value=0.76 Score=51.46 Aligned_cols=49 Identities=22% Similarity=0.369 Sum_probs=38.6
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCcc
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILT 701 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia---~~~gi~~ 701 (991)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 344445666799999999999999999999999976666666 5677753
No 168
>PHA02597 30.2 hypothetical protein; Provisional
Probab=88.44 E-value=0.93 Score=46.89 Aligned_cols=94 Identities=15% Similarity=0.116 Sum_probs=56.7
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++.||+.+.++.|++.+ +.+++|.-+..+....-+.+|+..-.. ..+ ...+.++... .|-
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~-----------------~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFP-----------------GAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCC-----------------Ccc-cEEEEeccCc-ccH
Confidence 46899999999999985 566667655444444555666542100 000 0002222222 134
Q ss_pred HHHHHHHhhcC-CEEEEeCCCCCChHhhhhC--CeeE
Q 001960 740 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGL 773 (991)
Q Consensus 740 ~~v~~l~~~~g-~~v~~iGDG~ND~~al~~A--dvgi 773 (991)
++++...+++| +.++++||..+|+.+-++| ++-.
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 45554444435 4588999999999999999 8853
No 169
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=87.83 E-value=1.7 Score=43.70 Aligned_cols=83 Identities=19% Similarity=0.155 Sum_probs=62.0
Q ss_pred cCCCcccHHHHHHHHHHCCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccc
Q 001960 658 KDPMRPGVKESVAICRSAGI--TVRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi--~v~mlTGD-------~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (991)
++.+-|+..+.+++|++.+. +|.++|-- +...|..+++.+|+.--
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 67888999999999999987 49999986 48899999999998520
Q ss_pred eEeccChhhHHHHHHHHHhh----cCCEEEEeCCCC-CChHhh
Q 001960 729 VMARSSPMDKHTLVKHLRTT----LGEVVAVTGDGT-NDAPAL 766 (991)
Q Consensus 729 v~ar~sP~~K~~~v~~l~~~----~g~~v~~iGDG~-ND~~al 766 (991)
.+....|.-..++.+.++.+ ..+.++||||-. .|+-+=
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~g 153 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMG 153 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHh
Confidence 12334786666777777643 135699999963 355443
No 170
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=87.77 E-value=3.2 Score=42.34 Aligned_cols=51 Identities=22% Similarity=0.354 Sum_probs=42.1
Q ss_pred EEEEEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH---HcCCc
Q 001960 650 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR---ECGIL 700 (991)
Q Consensus 650 ~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~---~~gi~ 700 (991)
.+-|.+.++|..-|++.||++.|+.++.+|..+|.-..+.-+.+.+ .||+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 3569999999999999999999999999999999877665555554 46664
No 171
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=85.32 E-value=1.9 Score=46.92 Aligned_cols=52 Identities=15% Similarity=0.177 Sum_probs=44.2
Q ss_pred Cc-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 001960 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (991)
Q Consensus 661 lr-~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~ 712 (991)
+| |++.+++++|+++|+++.++|+-....+...-+++|+...-+.++.+.+.
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCcc
Confidence 67 99999999999999999999999999999999999997543455555444
No 172
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=85.20 E-value=1.8 Score=45.88 Aligned_cols=100 Identities=16% Similarity=0.192 Sum_probs=74.9
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
..++.||+.+.+++|++.|+.+.+.|+-....+..+.+..|+...-..++++.+.. -.+-.|+-
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~----------------~~KP~Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA----------------RGKPAPDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh----------------cCCCCCHH
Confidence 35789999999999999999999999999999999999999986544444444321 11334444
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEE
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 774 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgia 774 (991)
=....+.|.-. ...+.++.|..|.+.|-++|+.-+-
T Consensus 148 yL~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv 183 (221)
T COG0637 148 YLLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVV 183 (221)
T ss_pred HHHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEE
Confidence 44555554333 4678999999999999999996643
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=84.27 E-value=4.6 Score=43.63 Aligned_cols=88 Identities=20% Similarity=0.283 Sum_probs=55.2
Q ss_pred cCCCcccHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEecc
Q 001960 658 KDPMRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 733 (991)
Q Consensus 658 ~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~----ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~ 733 (991)
+.|.=|++.+..+.+++.|++|+++||+... |..++ ++.|......+++.++.-. -...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~----------------~~~~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDN----------------SAEN 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCC----------------ccch
Confidence 5567789999999999999999999999854 33443 3467754333333221100 0001
Q ss_pred ChhhHHHHHHHHHhhcC-CEEEEeCCCCCCh
Q 001960 734 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 763 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g-~~v~~iGDG~ND~ 763 (991)
..+.|...=+.+.+. | ++++.+||-.+|.
T Consensus 206 av~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 113354444445555 5 6889999999986
No 174
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=83.26 E-value=11 Score=44.85 Aligned_cols=98 Identities=13% Similarity=0.059 Sum_probs=62.3
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhccccceEec------c
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 733 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~-~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar------~ 733 (991)
+++++.+ .+++.|.+ +++|+-...-+..+|++ +|++. ++ |.+++.- .+-.+-++ +
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~---------~~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL-GTELEVS---------KSGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE-ecccEEC---------cCCEEeeeecCCCCC
Confidence 5566544 44567755 99999999999999988 89862 11 1111100 00001111 3
Q ss_pred ChhhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecC
Q 001960 734 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 777 (991)
Q Consensus 734 sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~ 777 (991)
.-++|..-++..... .....+-||..||.|||+.|+-+.+++.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCC
Confidence 446788877743211 1123677999999999999999999983
No 175
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=82.86 E-value=9.7 Score=41.84 Aligned_cols=48 Identities=17% Similarity=0.183 Sum_probs=35.2
Q ss_pred EeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHH---HHHHHHHHcCCcc
Q 001960 654 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILT 701 (991)
Q Consensus 654 ~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~---ta~~ia~~~gi~~ 701 (991)
.+.-.+.+=|++.++|++|++.|++++++|+.... ....-.+++|+..
T Consensus 12 tl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 12 VLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred ceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33445677788999999999999999999996543 3223345678753
No 176
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=81.65 E-value=3.7 Score=43.92 Aligned_cols=91 Identities=12% Similarity=0.138 Sum_probs=55.4
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++-||+.++++.|++. +++.++|.-+.. .+..|+...-+.++...+. .+..|. .
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~--p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPF--S 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCc--H
Confidence 4568999999999875 899999886654 2556764321222222211 112232 2
Q ss_pred HHHHHHHhhcC---CEEEEeCCC-CCChHhhhhCCeeEEec
Q 001960 740 TLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLAMG 776 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG-~ND~~al~~Advgiamg 776 (991)
.+.....++.| +.++||||. ..|+.+-+.|++-....
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 22222222223 569999999 59999999998765543
No 177
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=81.52 E-value=3.5 Score=45.06 Aligned_cols=51 Identities=20% Similarity=0.149 Sum_probs=42.0
Q ss_pred Cc-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcc
Q 001960 661 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711 (991)
Q Consensus 661 lr-~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~ 711 (991)
+| |++.+++++|+++|+++.++|+.+...+..+.+..|+...-..++.+.+
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 56 8999999999999999999998888888999999999754344554443
No 178
>PLN02151 trehalose-phosphatase
Probab=80.84 E-value=15 Score=41.59 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=44.2
Q ss_pred hhHHHHHHHHHhhcC------CEEEEeCCCCCChHhhhhC-----CeeEEecCCCcHHHHhhcCEEeccCCchHHHHHH
Q 001960 736 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g------~~v~~iGDG~ND~~al~~A-----dvgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
-+|...|+.+.+..+ ..++++||-..|-.|++.. ++||-+| .+.. .-.|++.+.+ ...+..++
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCCC--HHHHHHHH
Confidence 489999998876644 2489999999999998753 6777776 2211 2358888865 66666554
No 179
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=79.69 E-value=5.1 Score=39.76 Aligned_cols=86 Identities=20% Similarity=0.298 Sum_probs=58.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhh
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 737 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~----~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~ 737 (991)
++=+++.|..-++.|=.+..+||+.. .++..+|+...|.+.+.....|+. .|...-+
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk-------------------~k~~qy~ 176 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDK-------------------PKPGQYT 176 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCC-------------------CCccccc
Confidence 44568889999999999999999985 356777888888654433333322 0111133
Q ss_pred HHHHHHHHHhhcCCEEEEeCCCCCChHhhhhCCe
Q 001960 738 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 771 (991)
Q Consensus 738 K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~Adv 771 (991)
| ...+|++ +-. ..-||+.||+.|-++|++
T Consensus 177 K---t~~i~~~-~~~-IhYGDSD~Di~AAkeaG~ 205 (237)
T COG3700 177 K---TQWIQDK-NIR-IHYGDSDNDITAAKEAGA 205 (237)
T ss_pred c---cHHHHhc-Cce-EEecCCchhhhHHHhcCc
Confidence 4 4456655 444 455999999999999875
No 180
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=79.16 E-value=3.9 Score=39.07 Aligned_cols=31 Identities=16% Similarity=0.192 Sum_probs=28.4
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHH
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINT 689 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t 689 (991)
+++.+++.++++++++.|+.++++||+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6789999999999999999999999998754
No 181
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=77.83 E-value=4.6 Score=43.61 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=40.0
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCcc
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILT 701 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTG---D~~~ta~~ia~~~gi~~ 701 (991)
|.+.-.+.+=|++.++|++|++.|++++++|| +.........+++|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33334566667999999999999999999996 77888888888899864
No 182
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=76.57 E-value=3.4 Score=44.09 Aligned_cols=64 Identities=23% Similarity=0.280 Sum_probs=32.6
Q ss_pred eEeccChhhHHHHHHHHHhhcCC------EEEEeCCCCCChHhhhhC------CeeEEecCCCcHH-HHhhcCEEecc
Q 001960 729 VMARSSPMDKHTLVKHLRTTLGE------VVAVTGDGTNDAPALHEA------DIGLAMGIAGTEV-AKESADVIILD 793 (991)
Q Consensus 729 v~ar~sP~~K~~~v~~l~~~~g~------~v~~iGDG~ND~~al~~A------dvgiamg~~g~~~-ak~~ad~vl~~ 793 (991)
|-.|..-..|...|+.+.+..+. .++++||...|-.|++.. +++|.+| .+... -..+|++-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 33454445699999988777443 699999999999998763 6678777 43322 33456666544
No 183
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=74.76 E-value=2.2 Score=42.78 Aligned_cols=95 Identities=12% Similarity=-0.012 Sum_probs=62.1
Q ss_pred eccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhccccceEeccC
Q 001960 656 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSS 734 (991)
Q Consensus 656 ~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~-~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~s 734 (991)
.+.=..|||+.+.++.|.+. +.+++.|......|..+...++..... ..++..+. .
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~----------------------~ 94 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRES----------------------C 94 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccc----------------------c
Confidence 34446899999999999988 999999999999999999998864310 01111111 0
Q ss_pred hhhHHHHHHHHHhh--cCCEEEEeCCCCCChHhhhhCCeeE
Q 001960 735 PMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 735 P~~K~~~v~~l~~~--~g~~v~~iGDG~ND~~al~~Advgi 773 (991)
...|...++.|..- .-..|.++||...|..+-+++.|-+
T Consensus 95 ~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 95 VFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred EEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 00011133444332 0256899999998887766665554
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=73.89 E-value=8.6 Score=46.02 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=33.3
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHHcCCc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGIL 700 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~------------~ta~~ia~~~gi~ 700 (991)
+-|+++++++.|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998554 3467778888874
No 185
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=72.56 E-value=72 Score=41.87 Aligned_cols=195 Identities=13% Similarity=0.113 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh-----cCCcEEEE----EeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeec
Q 001960 210 ILLVVFVTATSDYKQSLQFKDLDRE-----KKKITVQV----ARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF 280 (991)
Q Consensus 210 lllvi~v~~~~~~~~~~~~~~l~~~-----~~~~~v~V----~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~ 280 (991)
-.++.+..-.+..+...+..++... .+....+| +.-|....+...|.+|.|.+.++..+ +=+|=-.|.|+
T Consensus 117 ~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~-l~VdeS~LTGE 195 (997)
T TIGR01106 117 TGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG-CKVDNSSLTGE 195 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC-cEEEccccCCC
Confidence 3444555666666666666665321 12222222 24688999999999999999998653 44666666776
Q ss_pred ceEEecccCCCCCcceeccC---CCCeEEeccEEecCeEEEEEEEEeccchhhHHHhhhcCC-CCCCChhHHHHHHHHHH
Q 001960 281 SVLINESSLTGESEPVNVNA---LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG-GDDETPLQVKLNGVATI 356 (991)
Q Consensus 281 ~l~VDeS~LTGES~pv~k~~---~~~~l~sGt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~-~~~~t~lq~~l~~~~~~ 356 (991)
+.-|.-..-.-+..|....+ .+..+.+|+...-=..++.=+..|.-. ++++..... ..-...+++..+.++.+
T Consensus 196 S~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~---~~~~~~~~~~~pl~~~~~~~~~~~~~~ 272 (997)
T TIGR01106 196 SEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIA---SLASGLENGKTPIAIEIEHFIHIITGV 272 (997)
T ss_pred CCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHH---hhhhhcccCCCcHHHHHHHHHHHHHHH
Confidence 64343322111112222111 123477776433222233444455443 333332222 22224556666666665
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 001960 357 IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (991)
Q Consensus 357 i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~ 426 (991)
...+++++.++.++.. ..+.. .+...+...+..+-.+.|..++++...+...
T Consensus 273 ~~~~~~~~~~~~~~~~-~~~~~-----------------~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~ 324 (997)
T TIGR01106 273 AVFLGVSFFILSLILG-YTWLE-----------------AVIFLIGIIVANVPEGLLATVTVCLTLTAKR 324 (997)
T ss_pred HHHHHHHHHHHHHHhc-CCHHH-----------------HHHHHHHHHhhcCCccchHHHHHHHHHHHHH
Confidence 5554444443332221 11110 1112233344445566677777777766543
No 186
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=72.01 E-value=17 Score=39.41 Aligned_cols=125 Identities=18% Similarity=0.206 Sum_probs=79.4
Q ss_pred EEEeeccCCCcccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcCC--ccCCceee---eCcccccCCH--------
Q 001960 652 IGIVGIKDPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI--LTDNGIAI---EGPEFREKSD-------- 717 (991)
Q Consensus 652 lG~~~i~D~lr~~v~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~gi--~~~~~~vi---~g~~~~~~~~-------- 717 (991)
+..--...++-++..+.++.|... ...++|+||+..........--|| ...++..+ +|.......+
T Consensus 32 i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~ 111 (266)
T COG1877 32 IVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLK 111 (266)
T ss_pred cccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHH
Confidence 344445667778889999999988 457999999999988887764333 22333222 3332221111
Q ss_pred ----------------------------------HH-----Hhhh------------ccccceEeccChhhHHHHHHHHH
Q 001960 718 ----------------------------------EE-----LSKL------------IPKIQVMARSSPMDKHTLVKHLR 746 (991)
Q Consensus 718 ----------------------------------~~-----~~~~------------~~~~~v~ar~sP~~K~~~v~~l~ 746 (991)
++ +.+. ..+..|-+|.+-..|...++.+.
T Consensus 112 ~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~ 191 (266)
T COG1877 112 EVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIM 191 (266)
T ss_pred HHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHH
Confidence 00 0000 01223566666677999999766
Q ss_pred hhcCC---EEEEeCCCCCChHhhhhCC----eeEEec
Q 001960 747 TTLGE---VVAVTGDGTNDAPALHEAD----IGLAMG 776 (991)
Q Consensus 747 ~~~g~---~v~~iGDG~ND~~al~~Ad----vgiamg 776 (991)
+..+. .+.+.||...|-.|++..+ ++|-+|
T Consensus 192 ~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 192 DELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred hcCCCCCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 55343 4888999999999999887 455556
No 187
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=70.67 E-value=3.5 Score=41.57 Aligned_cols=83 Identities=12% Similarity=0.081 Sum_probs=52.3
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhH-
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 738 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K- 738 (991)
++.||+.++++ ++.++|.-+........+..|+...-..++++++. ....|.-.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~------------------~~~KP~p~~ 144 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTV------------------RAYKPDPVV 144 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhc------------------CCCCCCHHH
Confidence 47889999998 36789999888888888989985422222222221 11123222
Q ss_pred -HHHHHHHHhhcCCEEEEeCCCCCChHhhhh
Q 001960 739 -HTLVKHLRTTLGEVVAVTGDGTNDAPALHE 768 (991)
Q Consensus 739 -~~~v~~l~~~~g~~v~~iGDG~ND~~al~~ 768 (991)
....+.+.-. .+.++||||...|+.+-++
T Consensus 145 f~~~~~~~~~~-p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 145 YELVFDTVGLP-PDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHCCC-HHHeEeEecChhhHHHHhc
Confidence 3333333322 3669999999999877654
No 188
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=69.96 E-value=31 Score=36.19 Aligned_cols=121 Identities=15% Similarity=0.183 Sum_probs=70.8
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHH
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~ 739 (991)
++-+++.++++.+++. +++.++|--....+....+++|+...-+.++...+ .....|..+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~------------------~g~~KP~~~- 158 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISED------------------VGVAKPDPE- 158 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecc------------------cccCCCCcH-
Confidence 4567889999999998 99999999888888899999997653222222211 123344333
Q ss_pred HHHHHHHhh--cCCEEEEeCCC-CCChHhhhhCCee-EEecCCCc---HHHHhhcCEEeccCCchHHHHHH
Q 001960 740 TLVKHLRTT--LGEVVAVTGDG-TNDAPALHEADIG-LAMGIAGT---EVAKESADVIILDDNFSTIVTVA 803 (991)
Q Consensus 740 ~~v~~l~~~--~g~~v~~iGDG-~ND~~al~~Advg-iamg~~g~---~~ak~~ad~vl~~~~~~~i~~~i 803 (991)
..-..+++. ..+.+++|||. .||+..-++++.- +-+...+. +.. ...|+.+.+ +..+..++
T Consensus 159 ~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~-~~~~~~i~~--l~~l~~~~ 226 (229)
T COG1011 159 IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDAL-EAPDYEISS--LAELLDLL 226 (229)
T ss_pred HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCc-cCCceEEcC--HHHHHHHH
Confidence 222223322 03579999996 5674555555543 32331221 112 446666644 55555544
No 189
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=67.65 E-value=2.4e+02 Score=37.44 Aligned_cols=20 Identities=25% Similarity=0.430 Sum_probs=11.7
Q ss_pred CcEEEeCCCCeecccEEEEe
Q 001960 259 GDIVHLCMGDQVPADGLFVS 278 (991)
Q Consensus 259 GDIV~l~~Gd~VPaDgill~ 278 (991)
|....+...|.+|-|.++++
T Consensus 237 g~~~~I~s~eLvpGDiv~l~ 256 (1054)
T TIGR01657 237 GKWVTIASDELVPGDIVSIP 256 (1054)
T ss_pred CEEEEEEcccCCCCCEEEEe
Confidence 55555555666666666554
No 190
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=67.56 E-value=23 Score=36.06 Aligned_cols=97 Identities=23% Similarity=0.256 Sum_probs=56.6
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCH---HHHhhhcc--ccceEeccCh
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSD---EELSKLIP--KIQVMARSSP 735 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~---~~~~~~~~--~~~v~ar~sP 735 (991)
+.|++.+++..|+++|++++|+|--. ||... ..++++|..+.. +.+.+.-- ....+|.-.|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rg---yf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p 97 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRG---YFTEADFDKLHNKMLKILASQGVKIDGILYCPHHP 97 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Ccccc---CccHHHHHHHHHHHHHHHHHcCCccceEEECCCCC
Confidence 46899999999999999999999532 33221 111122221111 11111100 0114444444
Q ss_pred hh--------HHHHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCee
Q 001960 736 MD--------KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 772 (991)
Q Consensus 736 ~~--------K~~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Advg 772 (991)
++ ...+.+.+++. + ....+|||-..|..+-..|++.
T Consensus 98 ~~~c~cRKP~~gm~~~~~~~~-~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 98 EDNCDCRKPKPGMLLSALKEY-NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCcccCCChHHHHHHHHHh-CCCccceEEecCcHHHHHHHHHCCCC
Confidence 43 23444555544 5 6789999999999998888776
No 191
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=64.60 E-value=0.46 Score=38.99 Aligned_cols=52 Identities=12% Similarity=0.212 Sum_probs=43.3
Q ss_pred ccchhhhHHHHHhhhhhhhHHHHhhhhhhhhhhcccCCCCccccccccccCCcc
Q 001960 44 NLSKRFEAEAIRRSNQEKFRVAVLVSQAALQFIHGLNLSSEYTVPEEVAASGFQ 97 (991)
Q Consensus 44 ~l~~~~e~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 97 (991)
.+.++.++.+.+.+++.++.+++...++.+.|+.+ .....++.+.++++||.
T Consensus 11 ~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~--~~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 11 GCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD--KTSIEKIIEAIEKAGYE 62 (62)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT--TSCHHHHHHHHHHTTSE
T ss_pred HHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC--CCCHHHHHHHHHHhCcC
Confidence 45677889999999999999999999999999766 34557788888888884
No 192
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=64.43 E-value=1.2e+02 Score=29.00 Aligned_cols=84 Identities=15% Similarity=0.257 Sum_probs=47.6
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh-
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP- 735 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP- 735 (991)
+-+++.++..+.+++ |+.+.+......+......+.+.. ++++..+
T Consensus 3 i~~~~~~~~~~~l~~----~~~v~~~~~~~~~~~~~~l~~~d~-----------------------------ii~~~~~~ 49 (133)
T PF00389_consen 3 ITDPLPDEEIERLEE----GFEVEFCDSPSEEELAERLKDADA-----------------------------IIVGSGTP 49 (133)
T ss_dssp ESSS-SHHHHHHHHH----TSEEEEESSSSHHHHHHHHTTESE-----------------------------EEESTTST
T ss_pred EeccCCHHHHHHHHC----CceEEEeCCCCHHHHHHHhCCCeE-----------------------------EEEcCCCC
Confidence 345665555555554 777777774444433333333222 3444444
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCC--ChHhhhhCCeeEEec
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTN--DAPALHEADIGLAMG 776 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~N--D~~al~~Advgiamg 776 (991)
-+ ..+++.+.+ =+.+...|-|.| |.+++++-+|-++=.
T Consensus 50 ~~-~~~l~~~~~--Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 50 LT-AEVLEAAPN--LKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp BS-HHHHHHHTT---SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred cC-HHHHhccce--eEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 33 344555532 267888999998 788889888888643
No 193
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=63.87 E-value=29 Score=37.15 Aligned_cols=132 Identities=18% Similarity=0.255 Sum_probs=70.9
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCc-ccccCCHHHHhhhccccceEecc----
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMARS---- 733 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~-~~~~~~~~~~~~~~~~~~v~ar~---- 733 (991)
-.+|+|+.+.++.|++.+|.+.++|+-=-.-...+-++-|...++-.+++.. .|++- -.+.+=.
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~-----------g~l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDED-----------GVLVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TT-----------SBEEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCc-----------ceEeecCCCce
Confidence 4689999999999999999999999887777777778878877665444321 11100 0000000
Q ss_pred ChhhHHH-------HHHHHHhhcCCEEEEeCCCCCChHhhhhC---CeeEEecC-C-CcH----HHHhhcCEEeccCCch
Q 001960 734 SPMDKHT-------LVKHLRTTLGEVVAVTGDGTNDAPALHEA---DIGLAMGI-A-GTE----VAKESADVIILDDNFS 797 (991)
Q Consensus 734 sP~~K~~-------~v~~l~~~~g~~v~~iGDG~ND~~al~~A---dvgiamg~-~-g~~----~ak~~ad~vl~~~~~~ 797 (991)
.+-.|-. .-+.++. ...|+..||..-|+.|-.-. +.-+.+|- + ..| .-+++=|+|+.+|.=-
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~--R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm 235 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKK--RTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTM 235 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT----EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-
T ss_pred EEeeCCcccccCchHHHHhcc--CCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCc
Confidence 0111211 1223333 25688889999999997655 33333331 1 122 2457899999998755
Q ss_pred HHHHHH
Q 001960 798 TIVTVA 803 (991)
Q Consensus 798 ~i~~~i 803 (991)
.++..|
T Consensus 236 ~v~~~i 241 (246)
T PF05822_consen 236 DVPNAI 241 (246)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 555443
No 194
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=63.27 E-value=25 Score=39.67 Aligned_cols=106 Identities=15% Similarity=0.145 Sum_probs=65.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-C-------CccCCceeeeCcc----------cccCCHH----H
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-G-------ILTDNGIAIEGPE----------FREKSDE----E 719 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~-g-------i~~~~~~vi~g~~----------~~~~~~~----~ 719 (991)
-|++++.++.|+++|+++.++|+-....+..+.+.+ | +..--+.++.+.. ++..+.+ .
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~~~ 265 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVETGSLK 265 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCCCccc
Confidence 469999999999999999999999999999999996 6 4332334554433 1111110 0
Q ss_pred Hhhh--ccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCC-CChHhhh-hCCe
Q 001960 720 LSKL--IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT-NDAPALH-EADI 771 (991)
Q Consensus 720 ~~~~--~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~-ND~~al~-~Adv 771 (991)
.... +.+-.|++.=+-. .+.+.+.-. ++.|+++||-. .|+-.-+ .++.
T Consensus 266 ~~~~~~l~~g~vY~gGn~~---~~~~~l~~~-~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 266 WGEVDGLEPGKVYSGGSLK---QFHELLKWR-GKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred CCccccccCCCeEeCCCHH---HHHHHHCCC-CCcEEEECCcchHHHHhhHHhcCc
Confidence 0000 1222344443332 233444445 78999999974 4766555 4543
No 195
>PTZ00445 p36-lilke protein; Provisional
Probab=62.93 E-value=56 Score=34.10 Aligned_cols=138 Identities=16% Similarity=0.193 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEE--EeeccCC----------CcccHHHHHHHHHHCCC
Q 001960 610 NHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG--IVGIKDP----------MRPGVKESVAICRSAGI 677 (991)
Q Consensus 610 ~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG--~~~i~D~----------lr~~v~~~I~~l~~aGi 677 (991)
+.....++.+.+.|.|++++-+ |.|+++ .=|--+| ++|+.++-+++|+++||
T Consensus 29 ~~~~~~v~~L~~~GIk~Va~D~----------------DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I 92 (219)
T PTZ00445 29 ESADKFVDLLNECGIKVIASDF----------------DLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNI 92 (219)
T ss_pred HHHHHHHHHHHHcCCeEEEecc----------------hhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCC
Confidence 3445566778899999988742 233333 0112233 79999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEe------------------ccChhhHH
Q 001960 678 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA------------------RSSPMDKH 739 (991)
Q Consensus 678 ~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~a------------------r~sP~~K~ 739 (991)
+|.++|=-...+ +-. ......|.|.++-...-+.-..-..-..++| .-.|+.|.
T Consensus 93 ~v~VVTfSd~~~---~~~-----~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~ 164 (219)
T PTZ00445 93 KISVVTFSDKEL---IPS-----ENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKS 164 (219)
T ss_pred eEEEEEccchhh---ccc-----cCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchH
Confidence 999999666544 000 1122445555432211100000000000121 22344544
Q ss_pred HHHHHHHhhcC---CEEEEeCCCCCChHhhhhCCe
Q 001960 740 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI 771 (991)
Q Consensus 740 ~~v~~l~~~~g---~~v~~iGDG~ND~~al~~Adv 771 (991)
.=.+.+.+++| +.++++=|....+.+-++.++
T Consensus 165 yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 165 YHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred HHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 43355554435 568999999888888776543
No 196
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=62.70 E-value=1.4e+02 Score=37.85 Aligned_cols=194 Identities=16% Similarity=0.136 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeec-ceEEe
Q 001960 207 VMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF-SVLIN 285 (991)
Q Consensus 207 ~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~-~l~VD 285 (991)
.+.+++++++++..++.|+++.++..+...+... ....+ ++-|....+...|.+|-|.++++.. .+-+|
T Consensus 58 ~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~------~~~~V----~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD 127 (755)
T TIGR01647 58 FVIILGLLLLNATIGFIEENKAGNAVEALKQSLA------PKARV----LRDGKWQEIPASELVPGDVVRLKIGDIVPAD 127 (755)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCC------CeEEE----EECCEEEEEEhhhCcCCCEEEECCCCEEece
Confidence 4555566677777788888776666555554211 11222 2347788999999999999999854 35566
Q ss_pred cccCCCCCcceecc----CCCCe-EEeccEEecCeEEEEEEEEeccchhhH---HHhhhcCCCCCCChhHHHHHHHHHHH
Q 001960 286 ESSLTGESEPVNVN----ALNPF-LLSGTKVQNGSCKMLVTTVGMRTQWGK---LMATLSEGGDDETPLQVKLNGVATII 357 (991)
Q Consensus 286 eS~LTGES~pv~k~----~~~~~-l~sGt~v~~g~~~~~V~~~G~~T~~g~---i~~~~~~~~~~~t~lq~~l~~~~~~i 357 (991)
=-.+.|+..-+.-+ +..|. -..|..+..|+...-=..++.-+..|. +.+..+.-++. .+-...+++....+
T Consensus 128 g~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~-~~~~~~lq~~~~~i 206 (755)
T TIGR01647 128 CRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQST-ETGSGHLQKILSKI 206 (755)
T ss_pred EEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhcc-CCCCCcHHHHHHHH
Confidence 66666664333221 12231 235777777775544444444444442 22222222222 11122455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHH---HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Q 001960 358 GKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL---EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKM 431 (991)
Q Consensus 358 ~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~ilv~~vP~~L~lav~~~l~~~~~~~ 431 (991)
......+++++.++. ++. .+. ..+..++...+...-.+.|.+++++...++..-
T Consensus 207 ~~~~~~~~~~~~~i~---~~~-----------------~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g 263 (755)
T TIGR01647 207 GLFLIVLIGVLVLIE---LVV-----------------LFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVG 263 (755)
T ss_pred HHHHHHHHHHHHHHH---HHH-----------------HHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHH
Confidence 544333222222111 110 111 123445555555556677777777777766543
No 197
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=58.74 E-value=2.2e+02 Score=37.10 Aligned_cols=79 Identities=19% Similarity=0.082 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecc-e
Q 001960 204 LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-V 282 (991)
Q Consensus 204 ~~i~~~lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~-l 282 (991)
+.-.+.++++++++++-.+.++++.++.-+...... . ....| ++-|....+..-|.+|-|.++++..+ +
T Consensus 36 ~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~-----~-~~~~V----iRdg~~~~I~~~~Lv~GDiv~l~~Gd~I 105 (917)
T TIGR01116 36 FVEPFVILLILVANAIVGVWQERNAEKAIEALKEYE-----S-EHAKV----LRDGRWSVIKAKDLVPGDIVELAVGDKV 105 (917)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----C-CceEE----EECCEEEEEEHHHCCCCCEEEECCCCEe
Confidence 334455556666666666666655555444444311 1 11122 22377777788888888888877543 3
Q ss_pred EEecccCCCC
Q 001960 283 LINESSLTGE 292 (991)
Q Consensus 283 ~VDeS~LTGE 292 (991)
-.|=-.+.|+
T Consensus 106 PaD~~ll~~~ 115 (917)
T TIGR01116 106 PADIRVLSLK 115 (917)
T ss_pred eccEEEEEec
Confidence 3344444444
No 198
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=55.44 E-value=34 Score=34.49 Aligned_cols=41 Identities=17% Similarity=0.266 Sum_probs=31.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEc-CCCHHHHHHHHHHcCCc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVT-GDNINTAKAIARECGIL 700 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlT-GD~~~ta~~ia~~~gi~ 700 (991)
.+-|+++++++.|++.|+++.+.| -+.+.-|+.+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467899999999999999999999 58899999999999997
No 199
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=49.48 E-value=2.2e+02 Score=36.28 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=31.2
Q ss_pred CcccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHHcC
Q 001960 661 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECG 698 (991)
Q Consensus 661 lr~~v~~~I~~l~~a-Gi~v~mlTGD~~~ta~~ia~~~g 698 (991)
+-|+..++++.|.+. +..|+++||+...+.......++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 556788889998876 78899999999999888876543
No 200
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=47.62 E-value=1.4e+02 Score=32.78 Aligned_cols=172 Identities=17% Similarity=0.206 Sum_probs=101.0
Q ss_pred EEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC-----CCC---------
Q 001960 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SAD--------- 641 (991)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~-----~~~--------- 641 (991)
+.+---|.+..+.+.... .+-..+..+=..-.++...+++++++|+.++.++.+..++-. ..+
T Consensus 69 ViirAHGv~~~~~~~~~~---~gl~viDaTCP~V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~ 145 (280)
T TIGR00216 69 VIIRAHGVPPEVREELEK---KGLEVIDATCPLVTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLE 145 (280)
T ss_pred EEEeCCCCCHHHHHHHHH---CCCeEEeCCCcccHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHH
Confidence 333344777666654331 111222222222356788899999999999999987665420 000
Q ss_pred -CCCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCC--C------EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 001960 642 -APIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAG--I------TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 712 (991)
Q Consensus 642 -~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aG--i------~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~ 712 (991)
.+.+. ...-++++.=--..+++..+.++.|++.. . .+.-.|-+.+..+..+|+++.+. +
T Consensus 146 d~~~l~-~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~m----i------- 213 (280)
T TIGR00216 146 DLENFK-VEDLLGVVSQTTLSQEDTKEIVAELKARVPQKEVPVFNTICYATQNRQDAVKELAPEVDLM----I------- 213 (280)
T ss_pred HHHhCC-CCCcEEEEEcCCCcHHHHHHHHHHHHHhCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEE----E-------
Confidence 00010 11226666666666777788888888765 2 25677888888888888887654 2
Q ss_pred ccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCC-CChHhhhhCC-eeEEecCCCc
Q 001960 713 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEAD-IGLAMGIAGT 780 (991)
Q Consensus 713 ~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~-ND~~al~~Ad-vgiamg~~g~ 780 (991)
|.+.-....-.++.+..++. |..+..+.+.. -|...|+.++ |||.-| .+|
T Consensus 214 ----------------VVGg~nSsNT~rL~ei~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGiTAG-AST 265 (280)
T TIGR00216 214 ----------------VIGGKNSSNTTRLYEIAEEH-GPPSYLIETAEELPEEWLKGVKVVGITAG-AST 265 (280)
T ss_pred ----------------EECCCCCchHHHHHHHHHHh-CCCEEEECChHHCCHHHhCCCCEEEEEec-CCC
Confidence 33322333334566666666 76677765532 2455677554 788877 444
No 201
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=46.80 E-value=5.9e+02 Score=33.09 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=31.5
Q ss_pred eCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEec
Q 001960 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 286 (991)
Q Consensus 244 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDe 286 (991)
.-|....+..-|.+|-|.+.++ |+.+=+|==.+.|++.-|+-
T Consensus 184 vpGDiV~l~~Gd~IPaDg~li~-g~~l~VDES~LTGES~PV~K 225 (902)
T PRK10517 184 VPGDIIKLAAGDMIPADLRILQ-ARDLFVAQASLTGESLPVEK 225 (902)
T ss_pred CCCCEEEECCCCEEeeeEEEEE-cCceEEEecCcCCCCCceec
Confidence 3588999999999999999886 44455677777777644443
No 202
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=46.53 E-value=1.6e+02 Score=31.00 Aligned_cols=145 Identities=16% Similarity=0.155 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcCCcEEEEEeCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecc-eEEeccc
Q 001960 210 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFS-VLINESS 288 (991)
Q Consensus 210 lllvi~v~~~~~~~~~~~~~~l~~~~~~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~-l~VDeS~ 288 (991)
++++++++.+.++.++++.++..+..+... ..+...+ +.-|....+...|.+|-|.+.+...+ +-+|=-.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~v----~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~l 72 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLN-----PQKKVTV----IRDGRWQKIPSSELVPGDIIILKAGDIVPADGIL 72 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-----SSEEEEE----EETTEEEEEEGGGT-TTSEEEEETTEBESSEEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccC-----CCccEEE----EeccccccchHhhccceeeeecccccccccCccc
Confidence 556667777777777776666655454422 1221333 23379999999999999999998653 2233333
Q ss_pred CC-CCCcceec---cCCCCeE-E-----eccEEecCeEEEEEEEEeccchhhH---HHhhhcCCCCCCChhHHHHHHHHH
Q 001960 289 LT-GESEPVNV---NALNPFL-L-----SGTKVQNGSCKMLVTTVGMRTQWGK---LMATLSEGGDDETPLQVKLNGVAT 355 (991)
Q Consensus 289 LT-GES~pv~k---~~~~~~l-~-----sGt~v~~g~~~~~V~~~G~~T~~g~---i~~~~~~~~~~~t~lq~~l~~~~~ 355 (991)
|. |...--+- .+..|.- . .|..+..|+...-=...|.-+..|. +.+........ .+-...+++...
T Consensus 73 l~~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~-~~~~~~~~~~~~ 151 (230)
T PF00122_consen 73 LESGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS-ESKKSPLERKLN 151 (230)
T ss_dssp EESSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS-CSS-THHHHHHH
T ss_pred eeccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccc-cccchhhhhhhH
Confidence 33 32111110 0122322 2 6788888875442233344443342 22333322222 333455666666
Q ss_pred HHHHHHHHH
Q 001960 356 IIGKIGLFF 364 (991)
Q Consensus 356 ~i~~~~l~~ 364 (991)
.+....+.+
T Consensus 152 ~~~~~~~~~ 160 (230)
T PF00122_consen 152 KIAKILIII 160 (230)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 665544433
No 203
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=42.88 E-value=1.5e+02 Score=32.94 Aligned_cols=174 Identities=12% Similarity=0.153 Sum_probs=96.7
Q ss_pred EEEEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC-----CC----------
Q 001960 576 FRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SA---------- 640 (991)
Q Consensus 576 ~~~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~-----~~---------- 640 (991)
+.+---|.+..+.+.... .+-..+..+=..-.++.+.+++++++|+.++.++.+..++-. ..
T Consensus 69 ViirAHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~ 145 (298)
T PRK01045 69 VIFSAHGVSPAVREEAKE---RGLTVIDATCPLVTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPE 145 (298)
T ss_pred EEEeCCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHH
Confidence 333344777666654331 111222222122346778899999999999999977655420 00
Q ss_pred CCCCC-CCCcEEEEEeeccCCCcccHHHHHHHHHHCCCE--------EEEEcCCCHHHHHHHHHHcCCccCCceeeeCcc
Q 001960 641 DAPIP-TEGYTCIGIVGIKDPMRPGVKESVAICRSAGIT--------VRMVTGDNINTAKAIARECGILTDNGIAIEGPE 711 (991)
Q Consensus 641 ~~~~~-e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~--------v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~ 711 (991)
+.+.+ ..+..-++++.=--..+++..+.++.|++..-. +...|-+.+..+..+|+++... +
T Consensus 146 e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~m----i------ 215 (298)
T PRK01045 146 DVAKLEVKDPDKLALVTQTTLSVDDTAEIIAALKERFPEIQGPPKDDICYATQNRQEAVKELAPQADLV----I------ 215 (298)
T ss_pred HHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHHHHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEE----E------
Confidence 00011 012233566665555666777777777766432 2446777777788888776653 2
Q ss_pred cccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCC-CCChHhhhhC-CeeEEecCCCcH
Q 001960 712 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEA-DIGLAMGIAGTE 781 (991)
Q Consensus 712 ~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG-~ND~~al~~A-dvgiamg~~g~~ 781 (991)
|.+.-....-.++.+..++. |..+..+.+- --|...|+.. .|||.-| .+|+
T Consensus 216 -----------------VVGg~~SsNT~kL~~i~~~~-~~~t~~Ie~~~el~~~~l~~~~~VGitaG-ASTP 268 (298)
T PRK01045 216 -----------------VVGSKNSSNSNRLREVAEEA-GAPAYLIDDASEIDPEWFKGVKTVGVTAG-ASAP 268 (298)
T ss_pred -----------------EECCCCCccHHHHHHHHHHH-CCCEEEECChHHCcHHHhcCCCEEEEEec-CCCC
Confidence 33322333334566666666 7667776553 2244556544 5999877 4443
No 204
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=42.82 E-value=6.4e+02 Score=32.73 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=29.8
Q ss_pred CCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEe
Q 001960 245 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLIN 285 (991)
Q Consensus 245 ~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VD 285 (991)
-|....+..-|.+|-|.+.++.. ..=+|=-.+.|++.-|+
T Consensus 137 ~GDiv~l~~Gd~IPaDg~ii~g~-~l~VDES~LTGES~pv~ 176 (884)
T TIGR01522 137 PGDLVCLSVGDRVPADLRIVEAV-DLSIDESNLTGETTPVS 176 (884)
T ss_pred cCCEEEecCCCEEeeeEEEEEcC-ceEEEcccccCCCccee
Confidence 48889999999999999998743 34467667777764343
No 205
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=40.67 E-value=31 Score=37.55 Aligned_cols=94 Identities=19% Similarity=0.261 Sum_probs=62.1
Q ss_pred EEeeccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc----CCccCCceeeeCcccccCCHHHHhhhccccc
Q 001960 653 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC----GILTDNGIAIEGPEFREKSDEELSKLIPKIQ 728 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~----gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~ 728 (991)
|.+.--+.+=|++.++|+.|+++|++++++|-....+...++.++ |+....+.
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~----------------------- 73 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDD----------------------- 73 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHH-----------------------
Confidence 777778889999999999999999999999998877777554443 33221111
Q ss_pred eEeccChhhHHHHHHHHHhh-cCCEEEEeCCCCCChHhhhhCCeeEEe
Q 001960 729 VMARSSPMDKHTLVKHLRTT-LGEVVAVTGDGTNDAPALHEADIGLAM 775 (991)
Q Consensus 729 v~ar~sP~~K~~~v~~l~~~-~g~~v~~iGDG~ND~~al~~Advgiam 775 (991)
++.-. ......++++ .+..|.++|.+ .+...|+.+++-+.-
T Consensus 74 i~TS~-----~at~~~l~~~~~~~kv~viG~~-~l~~~l~~~G~~~~~ 115 (269)
T COG0647 74 IVTSG-----DATADYLAKQKPGKKVYVIGEE-GLKEELEGAGFELVD 115 (269)
T ss_pred eecHH-----HHHHHHHHhhCCCCEEEEECCc-chHHHHHhCCcEEec
Confidence 21111 1122334443 13689999953 667888888877643
No 206
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=40.32 E-value=37 Score=28.87 Aligned_cols=44 Identities=23% Similarity=0.317 Sum_probs=30.1
Q ss_pred CCEEEEeCCC-CCChHhhhhCCeeEE-e--cCCCcHHH---HhhcCEEecc
Q 001960 750 GEVVAVTGDG-TNDAPALHEADIGLA-M--GIAGTEVA---KESADVIILD 793 (991)
Q Consensus 750 g~~v~~iGDG-~ND~~al~~Advgia-m--g~~g~~~a---k~~ad~vl~~ 793 (991)
...++||||. ..|..+=+++++--. + |....+.. ...+|+|+.+
T Consensus 21 ~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 21 PSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp GGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 3579999999 999999999986533 2 32222222 3578998754
No 207
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.96 E-value=1.4e+02 Score=32.88 Aligned_cols=63 Identities=17% Similarity=0.245 Sum_probs=36.6
Q ss_pred EeccChhhHHHHHHHHHhh-cCCEEEEeCCCCCC----hHhhhh------CCeeEEecCCCcHH--HHhhcCEEecc
Q 001960 730 MARSSPMDKHTLVKHLRTT-LGEVVAVTGDGTND----APALHE------ADIGLAMGIAGTEV--AKESADVIILD 793 (991)
Q Consensus 730 ~ar~sP~~K~~~v~~l~~~-~g~~v~~iGDG~ND----~~al~~------Advgiamg~~g~~~--ak~~ad~vl~~ 793 (991)
|.-|||.-=.++++...-. .|+.+.++|-+..= +-+|.. |.|-++.. ...+. .-..||+++.-
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFVA 211 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 4456666555555544311 37899999988542 234544 56666554 33332 45779998864
No 208
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=39.73 E-value=28 Score=32.62 Aligned_cols=40 Identities=28% Similarity=0.288 Sum_probs=30.6
Q ss_pred CcccHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHcCCc
Q 001960 661 MRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~-v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
..+.+.+.+++|.+.|++ +|+.+|...+.+...|++.|+.
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 345679999999999996 9999999999999999999874
No 209
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=39.16 E-value=5.2e+02 Score=33.46 Aligned_cols=41 Identities=15% Similarity=0.188 Sum_probs=31.3
Q ss_pred eCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEe
Q 001960 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLIN 285 (991)
Q Consensus 244 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VD 285 (991)
.-|....+..-|.+|-|.+.++ |+-+=+|==.+.|++.-|+
T Consensus 150 v~GDiV~l~~Gd~VPaDg~li~-g~~l~VDES~LTGES~PV~ 190 (867)
T TIGR01524 150 VPGDLIELAAGDIIPADARVIS-ARDLFINQSALTGESLPVE 190 (867)
T ss_pred CCCCEEEECCCCEEcccEEEEe-cCceEEEcccccCCCCccc
Confidence 3588999999999999999887 4445567777788764443
No 210
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.69 E-value=3.4e+02 Score=29.88 Aligned_cols=166 Identities=14% Similarity=0.166 Sum_probs=87.1
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcc--cHHHHHHHHHHCCCEEEE
Q 001960 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~v~~~I~~l~~aGi~v~m 681 (991)
+.++.++++.+.++.+..+|.+. .+ +++-+-|.+-. -++..++.|++.||.+.+
T Consensus 11 va~~i~~~lk~~i~~l~~~g~~p-~L-----------------------aii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~ 66 (285)
T PRK14189 11 LSKQLRAEAAQRAAALTARGHQP-GL-----------------------AVILVGDNPASQVYVRNKVKACEDNGFHSLK 66 (285)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eE-----------------------EEEEeCCCchHHHHHHHHHHHHHHcCCEEEE
Confidence 44566677778888887766543 33 33333333322 247778999999998766
Q ss_pred EcCCC---HHHHHHHHHHcCCccC-CceeeeCcccccCCHHHHhhhc------------------cccceEeccChhhHH
Q 001960 682 VTGDN---INTAKAIARECGILTD-NGIAIEGPEFREKSDEELSKLI------------------PKIQVMARSSPMDKH 739 (991)
Q Consensus 682 lTGD~---~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~~~~~------------------~~~~v~ar~sP~~K~ 739 (991)
.-=+. .+...+.-++++=+.. +++++.-+-...++++++.+.+ ..-..|.=|||.-=.
T Consensus 67 ~~l~~~~~~~~l~~~I~~lN~d~~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii 146 (285)
T PRK14189 67 DRYPADLSEAELLARIDELNRDPKIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVM 146 (285)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHH
Confidence 54332 3334444444543322 2344443333333333332222 111234456665555
Q ss_pred HHHHHHHhh-cCCEEEEeCCCCC-C---hHhhhhCCeeEEecCCCc-HH--HHhhcCEEecc
Q 001960 740 TLVKHLRTT-LGEVVAVTGDGTN-D---APALHEADIGLAMGIAGT-EV--AKESADVIILD 793 (991)
Q Consensus 740 ~~v~~l~~~-~g~~v~~iGDG~N-D---~~al~~Advgiamg~~g~-~~--ak~~ad~vl~~ 793 (991)
++++...-. .|+.|.++|-|.. = +.+|...+.-+.+-.+.+ +. .-..||+++.-
T Consensus 147 ~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 147 KMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 555443211 3789999999866 2 335555554443322222 22 44679998864
No 211
>PRK00208 thiG thiazole synthase; Reviewed
Probab=38.66 E-value=2e+02 Score=30.84 Aligned_cols=50 Identities=16% Similarity=0.227 Sum_probs=40.5
Q ss_pred CCcEEEEEeeccCCCcccHHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHH
Q 001960 647 EGYTCIGIVGIKDPMRPGVKESVAICRSA---GITVRMVTGDNINTAKAIARE 696 (991)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~v~~~I~~l~~a---Gi~v~mlTGD~~~ta~~ia~~ 696 (991)
.++.=+=+++=.+.+.|+..++|+.++.. |..|+-.+-|++.+|++++.-
T Consensus 91 ~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 91 TNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34555556666777899999999999999 999997788888888888764
No 212
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=36.00 E-value=53 Score=32.62 Aligned_cols=43 Identities=19% Similarity=0.076 Sum_probs=38.2
Q ss_pred ccCCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 657 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
..=.+|||+.+.++.|++. +++.+.|.-....|..+.+.++..
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3445799999999999955 999999999999999999999875
No 213
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=35.93 E-value=3e+02 Score=30.47 Aligned_cols=75 Identities=24% Similarity=0.378 Sum_probs=48.7
Q ss_pred CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhc----CCE
Q 001960 677 ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL----GEV 752 (991)
Q Consensus 677 i~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~----g~~ 752 (991)
+..+|+-|...++...+|+..+++ |++|-. -...|-|-+.=+..+++++ |.+
T Consensus 100 ~D~I~~R~~~~~~ve~lA~~s~VP-----ViNgLt-------------------D~~HP~Q~LADl~Ti~E~~g~l~g~k 155 (310)
T COG0078 100 VDAIMIRGFSHETLEELAKYSGVP-----VINGLT-------------------DEFHPCQALADLMTIKEHFGSLKGLK 155 (310)
T ss_pred hheEEEecccHHHHHHHHHhCCCc-----eEcccc-------------------cccCcHHHHHHHHHHHHhcCcccCcE
Confidence 567899999999999999999985 455522 1124555544444455543 478
Q ss_pred EEEeCCCCCChH--hhhhCCeeEEe
Q 001960 753 VAVTGDGTNDAP--ALHEADIGLAM 775 (991)
Q Consensus 753 v~~iGDG~ND~~--al~~Advgiam 775 (991)
++++|||.|=+. ++..|-.|+-+
T Consensus 156 ~a~vGDgNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 156 LAYVGDGNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred EEEEcCcchHHHHHHHHHHHhCCeE
Confidence 999999965433 34444444433
No 214
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=35.79 E-value=70 Score=34.08 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=34.8
Q ss_pred EeeccCCCcccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHH-cCCc
Q 001960 654 IVGIKDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARE-CGIL 700 (991)
Q Consensus 654 ~~~i~D~lr~~v~~~I~~l~~aGi~v~mlT---GD~~~ta~~ia~~-~gi~ 700 (991)
++.-.+.+=|++.++|+.++++|++++++| |...........+ .|+.
T Consensus 8 vL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 8 VLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred ccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 333345666799999999999999999998 6666655554444 6764
No 215
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=34.82 E-value=1.2e+02 Score=33.79 Aligned_cols=91 Identities=25% Similarity=0.344 Sum_probs=61.8
Q ss_pred HHHHHHHHCCCE--EE-EEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHH
Q 001960 667 ESVAICRSAGIT--VR-MVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 740 (991)
Q Consensus 667 ~~I~~l~~aGi~--v~-mlTGD~~~---ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~ 740 (991)
-.|-.|-..||- +. =+|+|+.+ .+..|-+.+|+-.....+++.+. |+|+. -+-..
T Consensus 214 igig~LL~~GIGDTIRVSLT~dP~~EV~va~~IL~slglr~~g~~iiSCPt------------------CGR~~-~dl~~ 274 (346)
T TIGR00612 214 AGIGILLARGIGDTIRVSLTDDPTHEVPVAFEILQSLGLRARGVEIVACPS------------------CGRTG-FDVEK 274 (346)
T ss_pred HHHHHHHhhCCCCeEEEECCCCcHHHHHHHHHHHHHcCCCcCCCeEEECCC------------------CCCcC-CCHHH
Confidence 347788888873 33 37899855 56788999999766555555543 45544 23333
Q ss_pred HHHHHHhh-----cCCEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 741 LVKHLRTT-----LGEVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 741 ~v~~l~~~-----~g~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
+++.+.++ .+-.|++.|==+|-..--+.||+|||-|
T Consensus 275 ~~~~ve~~l~~~~~~l~VAVMGCvVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 275 VVRRVQEALFHLKTPLKVAVMGCVVNGPGEAKHADIGISGG 315 (346)
T ss_pred HHHHHHHHHhcCCCCCEEEEECceecCCchhhccCeeeecC
Confidence 33333322 1357999999999999999999999966
No 216
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=34.34 E-value=1.3e+02 Score=33.66 Aligned_cols=48 Identities=15% Similarity=0.143 Sum_probs=38.7
Q ss_pred EEeeccCCCcccHHHHHHHHHHC----CCEEEEEcCCC---HHH-HHHHHHHcCCc
Q 001960 653 GIVGIKDPMRPGVKESVAICRSA----GITVRMVTGDN---INT-AKAIARECGIL 700 (991)
Q Consensus 653 G~~~i~D~lr~~v~~~I~~l~~a----Gi~v~mlTGD~---~~t-a~~ia~~~gi~ 700 (991)
|++.-.+++-|++.++++.|++. |+++..+|-.. ..+ +..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 66667788899999999999999 99999999654 333 55666788875
No 217
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=33.85 E-value=32 Score=36.77 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=50.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHH
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTL 741 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~ 741 (991)
-++..++++.|++.|++. ++|......+.......|.. .-+ ..+...-.+...+..-+|+-=...
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------~~~-----~~i~~~g~~~~~~gKP~~~~~~~~ 204 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------YYA-----ELIKQLGGKVIYSGKPYPAIFHKA 204 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------HHH-----HHHHHhCCcEecCCCCCHHHHHHH
Confidence 478899999999999997 77776544333222222211 000 000000011112233333322333
Q ss_pred HHHHHhhcCCEEEEeCCC-CCChHhhhhCCeeE
Q 001960 742 VKHLRTTLGEVVAVTGDG-TNDAPALHEADIGL 773 (991)
Q Consensus 742 v~~l~~~~g~~v~~iGDG-~ND~~al~~Advgi 773 (991)
.+.+.....+.++|+||. .+|..+=+.|++-.
T Consensus 205 ~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 205 LKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 333321112469999999 59999988887653
No 218
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.70 E-value=5.5e+02 Score=28.47 Aligned_cols=166 Identities=13% Similarity=0.177 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcc--cHHHHHHHHHHCCCEEE
Q 001960 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVR 680 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~-glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~v~~~I~~l~~aGi~v~ 680 (991)
+.++.++++.+.++.+..+ |.+. . |+++-.-|..-. -++..++.|++.||.+.
T Consensus 10 ~a~~i~~~i~~~v~~l~~~~g~~p-~-----------------------La~i~vg~~~~s~~Yv~~k~k~a~~~Gi~~~ 65 (296)
T PRK14188 10 FAADVRATVAAEVARLKAAHGVTP-G-----------------------LAVVLVGEDPASQVYVRSKGKQTKEAGMASF 65 (296)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC-e-----------------------EEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 3455566777777777665 4432 2 223333333322 34677899999999866
Q ss_pred EE--cCC-CHHHHHHHHHHcCCccC-CceeeeCcccccCCHHHHh------------------hhccccceEeccChhhH
Q 001960 681 MV--TGD-NINTAKAIARECGILTD-NGIAIEGPEFREKSDEELS------------------KLIPKIQVMARSSPMDK 738 (991)
Q Consensus 681 ml--TGD-~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~~------------------~~~~~~~v~ar~sP~~K 738 (991)
+. ..+ ..+...+.-++++=+.. +++.+.-+-...+++.++. +++..-..|.-|||.-=
T Consensus 66 ~~~l~~~~~~~el~~~i~~lN~d~~V~GIlvq~Plp~~~~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~ai 145 (296)
T PRK14188 66 EHKLPADTSQAELLALIARLNADPAIHGILVQLPLPKHLDSEAVIQAIDPEKDVDGLHVVNAGRLATGETALVPCTPLGC 145 (296)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCHHHHHhccCcccccccCChhhHHHHhCCCCCCcCCCHHHH
Confidence 65 232 33344445555543322 2344433322233333322 22222223445666655
Q ss_pred HHHHHHHHh-hcCCEEEEeCC-CCCChH---hhhhCCeeEEecCC---CcHHHHhhcCEEecc
Q 001960 739 HTLVKHLRT-TLGEVVAVTGD-GTNDAP---ALHEADIGLAMGIA---GTEVAKESADVIILD 793 (991)
Q Consensus 739 ~~~v~~l~~-~~g~~v~~iGD-G~ND~~---al~~Advgiamg~~---g~~~ak~~ad~vl~~ 793 (991)
.++++...- -.|+.|+++|- +.-=.| +|..++..+.+-.+ ..+.+...||+++.-
T Consensus 146 ~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 146 MMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred HHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 555554321 13789999994 444444 46666666654311 122344568988764
No 219
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.62 E-value=4.7e+02 Score=29.04 Aligned_cols=166 Identities=15% Similarity=0.203 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcc--cHHHHHHHHHHCCCEEEE
Q 001960 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVRM 681 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~v~~~I~~l~~aGi~v~m 681 (991)
+.++.++++.+.++.+..+|.+. .+ +++-.-|.+-. -++.-++.|++.||+..+
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P-~L-----------------------aiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 67 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEP-AL-----------------------AVILVGNDPASQVYVRNKILRAEEAGIRSLE 67 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-eE-----------------------EEEEeCCChhHHHHHHHHHHHHHHcCCEEEE
Confidence 34556677778888887766443 22 33333333322 346778899999998655
Q ss_pred E--cCC-CHHHHHHHHHHcCCccC-CceeeeCcccccCCHHHH------------------hhhccccceEeccChhhHH
Q 001960 682 V--TGD-NINTAKAIARECGILTD-NGIAIEGPEFREKSDEEL------------------SKLIPKIQVMARSSPMDKH 739 (991)
Q Consensus 682 l--TGD-~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~------------------~~~~~~~~v~ar~sP~~K~ 739 (991)
. ..+ ..+...+.-++++=+.. +++.+.-+-...+++..+ .++...-.-|.-|||.-=.
T Consensus 68 ~~l~~~~t~~~l~~~I~~lN~D~~V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii 147 (301)
T PRK14194 68 HRLPADTSQARLLALIAELNADPSVNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCL 147 (301)
T ss_pred EECCCCCCHHHHHHHHHHHcCCCCCCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHH
Confidence 4 322 23334444444543322 234443332223333332 2222221234556666655
Q ss_pred HHHHHHHhh-cCCEEEEeCCC-CCChH---hhhhCCeeEEecCCCc---HHHHhhcCEEecc
Q 001960 740 TLVKHLRTT-LGEVVAVTGDG-TNDAP---ALHEADIGLAMGIAGT---EVAKESADVIILD 793 (991)
Q Consensus 740 ~~v~~l~~~-~g~~v~~iGDG-~ND~~---al~~Advgiamg~~g~---~~ak~~ad~vl~~ 793 (991)
++++...-. .|+.|+++|-| .-=.| +|..++..+.+=.+.+ ..+...||+++.-
T Consensus 148 ~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 148 RLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred HHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 555554321 37899999997 44444 4666666665431222 2244668999864
No 220
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=33.07 E-value=22 Score=31.18 Aligned_cols=22 Identities=36% Similarity=0.536 Sum_probs=16.5
Q ss_pred eecCCcccCcEEEe-CCCCeecc
Q 001960 251 ISIYDLLPGDIVHL-CMGDQVPA 272 (991)
Q Consensus 251 I~~~dLvvGDIV~l-~~Gd~VPa 272 (991)
+.-.+|.+||.|.+ +.||.||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 44578999999998 57999996
No 221
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.60 E-value=7.1e+02 Score=27.42 Aligned_cols=166 Identities=16% Similarity=0.227 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCccc--HHHHHHHHHHCCCEEE
Q 001960 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVR 680 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~-glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~--v~~~I~~l~~aGi~v~ 680 (991)
+.++.++++.+.++.+..+ |.+. . |+++-..|..-.. ++..++.|++.|+.+.
T Consensus 10 ia~~i~~~lk~~v~~l~~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 65 (284)
T PRK14179 10 LAQKMQAELAEKVAKLKEEKGIVP-G-----------------------LVVILVGDNPASQVYVRNKERSALAAGFKSE 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCc-e-----------------------EEEEEeCCChhHHHHHHHHHHHHHHcCCEEE
Confidence 4455666777777777655 4332 2 3334444444332 3667899999999876
Q ss_pred EEcCCC---HHHHHHHHHHcCCccC-CceeeeCcccccCCHHHH------------------hhhccccceEeccChhhH
Q 001960 681 MVTGDN---INTAKAIARECGILTD-NGIAIEGPEFREKSDEEL------------------SKLIPKIQVMARSSPMDK 738 (991)
Q Consensus 681 mlTGD~---~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~------------------~~~~~~~~v~ar~sP~~K 738 (991)
...=+. .+...+.-++++=... +++++.-+-...++++.+ .+++..-.-+.-|||.-=
T Consensus 66 ~~~l~~~~~~~~l~~~I~~lN~d~~V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av 145 (284)
T PRK14179 66 VVRLPETISQEELLDLIERYNQDPTWHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGI 145 (284)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHH
Confidence 654332 3334444444443221 233333332223333332 222222223455667665
Q ss_pred HHHHHHHHhh-cCCEEEEeCC-CCCChH---hhhhCCeeEEecCCCcH---HHHhhcCEEecc
Q 001960 739 HTLVKHLRTT-LGEVVAVTGD-GTNDAP---ALHEADIGLAMGIAGTE---VAKESADVIILD 793 (991)
Q Consensus 739 ~~~v~~l~~~-~g~~v~~iGD-G~ND~~---al~~Advgiamg~~g~~---~ak~~ad~vl~~ 793 (991)
.++++...-. .|+.++++|- |.-=.| +|..++.-+.+=.+-++ .....||+++.-
T Consensus 146 i~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 146 MEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 5555543221 3789999999 555555 45556555544212222 234679999864
No 222
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=32.52 E-value=1.2e+03 Score=30.21 Aligned_cols=158 Identities=13% Similarity=0.083 Sum_probs=81.1
Q ss_pred eCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccC------------CCCCcc-eecc---CCCCeEEe
Q 001960 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSL------------TGESEP-VNVN---ALNPFLLS 307 (991)
Q Consensus 244 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~L------------TGES~p-v~k~---~~~~~l~s 307 (991)
.-|....+..-|.+|-|.+.++. +.+=+|=-.+.|++.-|+-... .|+..+ ..+. -.+..+.+
T Consensus 173 v~GDiV~l~~Gd~IPaDg~li~g-~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~ 251 (903)
T PRK15122 173 VPGDIVHLSAGDMIPADVRLIES-RDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVS 251 (903)
T ss_pred CCCCEEEECCCCEEeeeEEEEEc-CceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEe
Confidence 35889999999999999998874 3455676677777644544321 122111 1111 12345777
Q ss_pred ccEEecCeEEEEEEEEeccchhhHHHhhhcCCCC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCC
Q 001960 308 GTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGD---DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 384 (991)
Q Consensus 308 Gt~v~~g~~~~~V~~~G~~T~~g~i~~~~~~~~~---~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~ 384 (991)
|+...-=..++.=+..|.=. +.+..-..... +-.++.+.+..++.++.++.++++.+...-+. .
T Consensus 252 G~~~~~V~atG~~T~~gkI~---~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~-~--------- 318 (903)
T PRK15122 252 GTATAVVVATGSRTYFGSLA---KSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTKGDWL-E--------- 318 (903)
T ss_pred eeEEEEEEEeccccHhhHHH---HHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHH-H---------
Confidence 76544322233333333222 11111111111 11345666777777776666655543221111 0
Q ss_pred CccccCCcChHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Q 001960 385 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAF 426 (991)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~i~ilv~~vP~~L~lav~~~l~~ 426 (991)
.+...+..++...-.+.|..+++++..+...
T Consensus 319 -----------~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~ 349 (903)
T PRK15122 319 -----------ALLFALAVAVGLTPEMLPMIVSSNLAKGAIA 349 (903)
T ss_pred -----------HHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 1223344556666666677777777766543
No 223
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.29 E-value=1.9e+02 Score=31.75 Aligned_cols=45 Identities=20% Similarity=0.304 Sum_probs=31.3
Q ss_pred ccCCCcccHHHHHHHHHHCCCE---EEEEcCCCHHHH------HHHHHHcCCcc
Q 001960 657 IKDPMRPGVKESVAICRSAGIT---VRMVTGDNINTA------KAIARECGILT 701 (991)
Q Consensus 657 i~D~lr~~v~~~I~~l~~aGi~---v~mlTGD~~~ta------~~ia~~~gi~~ 701 (991)
+...++.+.++.++.|++.|++ ..++.||++... ...|+++||..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 4456778888888888887775 566778876543 34567778753
No 224
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=30.68 E-value=2.7e+02 Score=31.53 Aligned_cols=141 Identities=21% Similarity=0.278 Sum_probs=79.0
Q ss_pred HHHHHHHHHHcccceeeeeEEecCCC--------CCCCCCCCCCCcEEEEEeeccCCCcccH---HHHHHHHHHCCCE--
Q 001960 612 LNETIEKFASEALRTLCLACMEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGV---KESVAICRSAGIT-- 678 (991)
Q Consensus 612 ~~~~~~~~a~~glR~l~~A~~~l~~~--------~~~~~~~~e~~l~~lG~~~i~D~lr~~v---~~~I~~l~~aGi~-- 678 (991)
..+.++-+.+.|+.-+.++.|.-+-. ..+..+ .- --+|++--- +..+++ .-.+-.|-..||-
T Consensus 162 A~~~~~~le~~~f~~iviSlKsSdv~~~i~ayr~la~~~d---yP-LHLGvTEAG-~~~~g~IkSsigiG~LL~~GIGDT 236 (359)
T PF04551_consen 162 ALEHVRILEELGFDDIVISLKSSDVPETIEAYRLLAERMD---YP-LHLGVTEAG-TGEDGTIKSSIGIGALLLDGIGDT 236 (359)
T ss_dssp HHHHHHHHHHCT-GGEEEEEEBSSHHHHHHHHHHHHHH-----S--EEEEBSSEE-SCHHHHHHHHHHHHHHHHTT--SE
T ss_pred HHHHHHHHHHCCCCcEEEEEEeCChHHHHHHHHHHHHhcC---CC-eEEeecCCC-CcccchhHHHHHHHHHHHcCCCCE
Confidence 34455566677777677766532211 000001 11 124554322 333343 3346678888883
Q ss_pred EE-EEcCCC---HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhhc-----
Q 001960 679 VR-MVTGDN---INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL----- 749 (991)
Q Consensus 679 v~-mlTGD~---~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~----- 749 (991)
++ -+|+|+ ...+..|-+.+|+-.....+++.+ -|+|. --|-..+++.+++++
T Consensus 237 IRVSLt~~p~~EV~va~~IL~al~lR~~g~~~ISCP------------------tCGRt-~~Dl~~~~~~ie~~l~~l~~ 297 (359)
T PF04551_consen 237 IRVSLTGDPVEEVKVAFEILQALGLRKRGPEIISCP------------------TCGRT-EFDLQELVAEIEERLKHLKK 297 (359)
T ss_dssp EEE-ECSSCCCHHHHHHHHHHHTTSS-SS-EEEE----------------------TT---SHHHHHHHHHHHHCCCHHC
T ss_pred EEEECCCCchHHHHHHHHHHHHhCcCcCCceeeeCC------------------CCCCc-cchHHHHHHHHHHHHhcCCC
Confidence 33 368887 457888889999875444444443 34554 556667777777663
Q ss_pred CCEEEEeCCCCCChHhhhhCCeeEEec
Q 001960 750 GEVVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 750 g~~v~~iGDG~ND~~al~~Advgiamg 776 (991)
+-.|++.|==+|=..-.+.||+|++.|
T Consensus 298 ~lkIAVMGCiVNGPGEa~~AD~GiaGg 324 (359)
T PF04551_consen 298 GLKIAVMGCIVNGPGEAKDADIGIAGG 324 (359)
T ss_dssp G-EEEEESSTCCCHHHCTTSSEEEE-E
T ss_pred CceEEEEeeeecCCchhhhCceeeecC
Confidence 347999999999999999999999944
No 225
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=30.28 E-value=30 Score=37.93 Aligned_cols=169 Identities=14% Similarity=0.216 Sum_probs=85.6
Q ss_pred EcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCC-----CCC--C----------C
Q 001960 580 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE-----FSA--D----------A 642 (991)
Q Consensus 580 ~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~-----~~~--~----------~ 642 (991)
--|.+..+.+.... .+-..+..+=..-.++.+.+++++++|+.++.++.+..++- ... . .
T Consensus 71 AHGv~~~~~~~l~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~ 147 (281)
T PF02401_consen 71 AHGVPPEVYEELKE---RGLEVIDATCPFVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVE 147 (281)
T ss_dssp TT---HHHHHHHHH---TTEEEEE---HHHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHH
T ss_pred CCCCCHHHHHHHHH---cCCEEEECCChhHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhc
Confidence 34777666654331 11223333333456788899999999999999986544321 000 0 0
Q ss_pred CCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCEEE--------EEcCCCHHHHHHHHHHcCCccCCceeeeCccccc
Q 001960 643 PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVR--------MVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 714 (991)
Q Consensus 643 ~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~v~--------mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~ 714 (991)
.....+..-++++.=--..+++..+.++.|++..-... -.|-+.+..+..+|+++.+.
T Consensus 148 ~l~~~~~~kv~vvsQTT~~~~~~~~i~~~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~m-------------- 213 (281)
T PF02401_consen 148 KLPISDPKKVAVVSQTTQSVEKFEEIVEALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAM-------------- 213 (281)
T ss_dssp HGGGSSTTCEEEEE-TTS-HHHHHHHHHHHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEE--------------
T ss_pred ccCCCCCCeEEEEEeecccHHHHHHHHHHHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEE--------------
Confidence 00111122345555445555666666777766654443 33444455555555554432
Q ss_pred CCHHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCCh--HhhhhC-CeeEEecCCCcH
Q 001960 715 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA--PALHEA-DIGLAMGIAGTE 781 (991)
Q Consensus 715 ~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND~--~al~~A-dvgiamg~~g~~ 781 (991)
.|.+.-....-.++.+..++. |..+..+.+ ..|. .+|+.+ .|||.-| ++|+
T Consensus 214 -------------iVIGg~~SsNT~kL~eia~~~-~~~t~~Ie~-~~el~~~~l~~~~~VGItaG-ASTP 267 (281)
T PF02401_consen 214 -------------IVIGGKNSSNTRKLAEIAKEH-GKPTYHIET-ADELDPEWLKGVKKVGITAG-ASTP 267 (281)
T ss_dssp -------------EEES-TT-HHHHHHHHHHHHC-TTCEEEESS-GGG--HHHHTT-SEEEEEE--TTS-
T ss_pred -------------EEecCCCCccHHHHHHHHHHh-CCCEEEeCC-ccccCHhHhCCCCEEEEEcc-CCCC
Confidence 144444445566777877777 877888766 3454 467777 7999888 5444
No 226
>PRK14042 pyruvate carboxylase subunit B; Provisional
Probab=29.98 E-value=1.6e+02 Score=36.08 Aligned_cols=116 Identities=14% Similarity=0.156 Sum_probs=77.1
Q ss_pred EeeccCCCcccHHHHHHHHHHCCCEE-EEEcC----CCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcc---
Q 001960 654 IVGIKDPMRPGVKESVAICRSAGITV-RMVTG----DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP--- 725 (991)
Q Consensus 654 ~~~i~D~lr~~v~~~I~~l~~aGi~v-~mlTG----D~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~--- 725 (991)
++|....+++=+...++...+.|+.+ ++.+. ||...+...++++|......+++++.. ..+.+.+.++..
T Consensus 87 ~vGy~~~~d~vv~~~v~~a~~~Gidv~Rifd~lnd~~n~~~~i~~~k~~G~~~~~~i~yt~sp--~~t~e~~~~~ak~l~ 164 (596)
T PRK14042 87 LLGYRNYADDVVRAFVKLAVNNGVDVFRVFDALNDARNLKVAIDAIKSHKKHAQGAICYTTSP--VHTLDNFLELGKKLA 164 (596)
T ss_pred ccccccCChHHHHHHHHHHHHcCCCEEEEcccCcchHHHHHHHHHHHHcCCEEEEEEEecCCC--CCCHHHHHHHHHHHH
Confidence 66777777777788999999999974 44444 457788889999998877667777755 334444333331
Q ss_pred ----cc----ceEeccChhhHHHHHHHHHhhcCCEEEEeCCCCCC-----hHhhhhCCeeE
Q 001960 726 ----KI----QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND-----APALHEADIGL 773 (991)
Q Consensus 726 ----~~----~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG~ND-----~~al~~Advgi 773 (991)
+. .-.+-++|.+=.++|+.+++.++-.+.+ .+.|| +.++++++.|+
T Consensus 165 ~~Gad~I~IkDtaG~l~P~~v~~lv~alk~~~~ipi~~--H~Hnt~Gla~an~laAieaGa 223 (596)
T PRK14042 165 EMGCDSIAIKDMAGLLTPTVTVELYAGLKQATGLPVHL--HSHSTSGLASICHYEAVLAGC 223 (596)
T ss_pred HcCCCEEEeCCcccCCCHHHHHHHHHHHHhhcCCEEEE--EeCCCCCcHHHHHHHHHHhCC
Confidence 11 1245688999999999999875533333 22333 44566665554
No 227
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=29.95 E-value=1.1e+02 Score=25.68 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=24.7
Q ss_pred CcEEEEEeCCeEEEeec---CCcccCcEEEeCCCCe
Q 001960 237 KITVQVARNGFRRKISI---YDLLPGDIVHLCMGDQ 269 (991)
Q Consensus 237 ~~~v~V~R~G~~~~I~~---~dLvvGDIV~l~~Gd~ 269 (991)
...+.|-.+|..++|+. .++.|||-|.+..|-.
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~A 51 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFA 51 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChh
Confidence 44677778999999874 5788999999999954
No 228
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=29.50 E-value=26 Score=35.54 Aligned_cols=14 Identities=36% Similarity=0.385 Sum_probs=12.5
Q ss_pred EEeCccCccccCce
Q 001960 453 ICSDKTGTLTTNHM 466 (991)
Q Consensus 453 I~~DKTGTLT~n~m 466 (991)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999883
No 229
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=28.53 E-value=1.4e+03 Score=29.74 Aligned_cols=175 Identities=14% Similarity=0.042 Sum_probs=79.6
Q ss_pred eCCeEEEeecCCcccCcEEEeCCCCeecccEEEEeecceEEecccCCCCCcceeccCCCCeEEeccEEecCeEEEEEEEE
Q 001960 244 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTV 323 (991)
Q Consensus 244 R~G~~~~I~~~dLvvGDIV~l~~Gd~VPaDgill~g~~l~VDeS~LTGES~pv~k~~~~~~l~sGt~v~~g~~~~~V~~~ 323 (991)
.-|....+...|.+|.|.+.++ |+..=+|=-.|.|++.-++-. .|+.+.+. . +..+.+|+...-=..++.=+..
T Consensus 185 v~GDiV~l~~Gd~IPaD~~li~-g~~l~VdES~LTGES~pv~K~--~~~~n~v~--~-GT~v~~G~~~~iV~~tG~~T~~ 258 (941)
T TIGR01517 185 VVGDIVSLSTGDVVPADGVFIS-GLSLEIDESSITGESDPIKKG--APKDSFLL--S-GTVVNEGSGRMLVTAVGVNSFG 258 (941)
T ss_pred CCCCEEEECCCCEecccEEEEE-cCcEEEEecccCCCCCccccc--CCCCceEE--e-CCeEEeeEEEEEEEEeCCCcHH
Confidence 3588999999999999999985 444556666667766433322 23333333 2 2346666533321222222222
Q ss_pred eccchhhHHHhhhcCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCccccCCcChHHHHHHHHH
Q 001960 324 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 403 (991)
Q Consensus 324 G~~T~~g~i~~~~~~~~~~~t~lq~~l~~~~~~i~~~~l~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (991)
|.=. +.+........-+..+.+..+.+..+...+++++.++.++.++...............+ .....+...+..
T Consensus 259 gki~---~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~al~l 333 (941)
T TIGR01517 259 GKLM---MELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQ--TFLDHFIIAVTI 333 (941)
T ss_pred HHHH---HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhH--HHHHHHHHHHHH
Confidence 2211 11111111222222333333344333333333222222222222111110000000000 001245566666
Q ss_pred HHHHHHHHcCCchHHHHHHHHHHHHH
Q 001960 404 AVTIVVVAVPEGLPLAVTLSLAFAMK 429 (991)
Q Consensus 404 ~i~ilv~~vP~~L~lav~~~l~~~~~ 429 (991)
.+...-.+.|...++++..+.....+
T Consensus 334 lv~~iP~~Lp~~vti~l~~~~~~mak 359 (941)
T TIGR01517 334 VVVAVPEGLPLAVTIALAYSMKKMMK 359 (941)
T ss_pred HHhhCCCchHHHHHHHHHHHHHHHHh
Confidence 67776677788888888877655443
No 230
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.77 E-value=7.3e+02 Score=27.50 Aligned_cols=165 Identities=14% Similarity=0.231 Sum_probs=85.6
Q ss_pred CCHHHHHHHHHHHHHHHHc-ccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCcc--cHHHHHHHHHHCCCEEE
Q 001960 604 LNEAAVNHLNETIEKFASE-ALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP--GVKESVAICRSAGITVR 680 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~-glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~--~v~~~I~~l~~aGi~v~ 680 (991)
+.++.++++.+.++.+.++ |.+. . |+++-.-|.+-. -++..++.|++.||++.
T Consensus 9 iA~~i~~~i~~~v~~l~~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~ 64 (295)
T PRK14174 9 VSLDLKNELKTRVEAYRAKTGKVP-G-----------------------LTVIIVGEDPASQVYVRNKAKSCKEIGMNST 64 (295)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCC-e-----------------------EEEEEeCCChHHHHHHHHHHHHHHHcCCEEE
Confidence 3455666777777777665 4332 2 233333333332 34777899999999866
Q ss_pred EEc--CC-CHHHHHHHHHHcCCccC-CceeeeCcccccCCHHH------------------Hhhhcccc--ceEeccChh
Q 001960 681 MVT--GD-NINTAKAIARECGILTD-NGIAIEGPEFREKSDEE------------------LSKLIPKI--QVMARSSPM 736 (991)
Q Consensus 681 mlT--GD-~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~------------------~~~~~~~~--~v~ar~sP~ 736 (991)
..- .+ ..+...+.-++++-+.. +++.+.-+-...+++.. +.+++..- .-|.-|||.
T Consensus 65 ~~~l~~~~~~~el~~~I~~lN~D~~V~GIlvq~Plp~~id~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~~~PcTp~ 144 (295)
T PRK14174 65 VIELPADTTEEHLLKKIEDLNNDPDVHGILVQQPLPKQIDEFAVTLAIDPAKDVDGFHPENLGRLVMGHLDKCFVSCTPY 144 (295)
T ss_pred EEECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhcCCccccccccChhhHHHHhcCCCCCCcCCCCHH
Confidence 553 33 23333444455543322 23444333222333332 22222111 234456776
Q ss_pred hHHHHHHHHHhh-cCCEEEEeCCCCCC----hHhhh------hCCeeEEecCCCcH--HHHhhcCEEecc
Q 001960 737 DKHTLVKHLRTT-LGEVVAVTGDGTND----APALH------EADIGLAMGIAGTE--VAKESADVIILD 793 (991)
Q Consensus 737 ~K~~~v~~l~~~-~g~~v~~iGDG~ND----~~al~------~Advgiamg~~g~~--~ak~~ad~vl~~ 793 (991)
-=.++++...-. .|+.|+++|-+..= +-||. .|.|-++.. ...+ ..-..||+++.-
T Consensus 145 ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 145 GILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIAA 213 (295)
T ss_pred HHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEEe
Confidence 555555544311 37899999998552 22443 366666654 3222 245779999865
No 231
>PRK11507 ribosome-associated protein; Provisional
Probab=27.50 E-value=66 Score=27.25 Aligned_cols=26 Identities=19% Similarity=0.233 Sum_probs=21.6
Q ss_pred EEEeCCeEEEeecCCcccCcEEEeCC
Q 001960 241 QVARNGFRRKISIYDLLPGDIVHLCM 266 (991)
Q Consensus 241 ~V~R~G~~~~I~~~dLvvGDIV~l~~ 266 (991)
.|..||+...-.-+.|.+||+|.+.-
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 35559999988999999999998754
No 232
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=27.03 E-value=1.4e+02 Score=25.96 Aligned_cols=47 Identities=19% Similarity=0.191 Sum_probs=38.6
Q ss_pred EeeccCCCcccHHHHHHHHHHCCCEEEE-EcCCCHHHHHHHHHHcCCc
Q 001960 654 IVGIKDPMRPGVKESVAICRSAGITVRM-VTGDNINTAKAIARECGIL 700 (991)
Q Consensus 654 ~~~i~D~lr~~v~~~I~~l~~aGi~v~m-lTGD~~~ta~~ia~~~gi~ 700 (991)
++.+.+..++.+.+..+.|++.|+++.+ ..+.+...-..-|...|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445667888899999999999999988 5777777888888888875
No 233
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=26.92 E-value=3.9e+02 Score=29.36 Aligned_cols=171 Identities=13% Similarity=0.154 Sum_probs=94.0
Q ss_pred EEEcCchHHHHHhccccccCCCeeecCCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCC-----CCCC----------
Q 001960 578 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF-----SADA---------- 642 (991)
Q Consensus 578 ~~~KGa~e~il~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~-----~~~~---------- 642 (991)
+---|.+..+.+.... .+-..+..+=..-.++...+++++++|+.++.++.+..++-. ..+.
T Consensus 74 irAHGv~~~~~~~~~~---~g~~viDaTCP~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~vv~~~~d~ 150 (281)
T PRK12360 74 IRSHGVSKKVYKDLKD---KGLEIIDATCPFVKKIQNIVEEYYNKGYSIIIVGDKNHPEVIGINGWCDNSAYIVNSIEEV 150 (281)
T ss_pred EeCCCCCHHHHHHHHH---CCCeEEeCCCccchHHHHHHHHHHhCCCEEEEEcCCCCceeeEeccCcCCCeEEECCHHHH
Confidence 3344777666654331 111122122122345778889999999999999876655420 0000
Q ss_pred CCCCCCcEEEEEeeccCCCcccHHHHHHHHHHCCCE------EEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCC
Q 001960 643 PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGIT------VRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 716 (991)
Q Consensus 643 ~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~aGi~------v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~ 716 (991)
+.+. ...=++++.=--..+++..+.++.|++..-. +...|-+.+..+..+|+++.+. +
T Consensus 151 ~~l~-~~~kv~~vsQTT~~~~~~~~iv~~l~~~~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~m----i----------- 214 (281)
T PRK12360 151 ENIP-FLDKACVVAQTTIIPELWEDILNVIKLKSKELVFFNTICSATKKRQESAKELSKEVDVM----I----------- 214 (281)
T ss_pred hhCc-cccCEEEEECCCCcHHHHHHHHHHHHHhCcccccCCCcchhhhhHHHHHHHHHHhCCEE----E-----------
Confidence 0000 0122455555555566667777777765433 3445666677777777776654 2
Q ss_pred HHHHhhhccccceEeccChhhHHHHHHHHHhhcCCEEEEeCCC-CCChHhhhhC-CeeEEecCCCcH
Q 001960 717 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEA-DIGLAMGIAGTE 781 (991)
Q Consensus 717 ~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~~g~~v~~iGDG-~ND~~al~~A-dvgiamg~~g~~ 781 (991)
|.+......-.++.+..++. |..+..+.+- --|...|+.+ .|||.-| .+|+
T Consensus 215 ------------VVGg~~SsNT~rL~eia~~~-~~~t~~Ie~~~el~~~~~~~~~~VGitaG-ASTP 267 (281)
T PRK12360 215 ------------VIGGKHSSNTQKLVKICEKN-CPNTFHIETADELDLEMLKDYKIIGITAG-ASTP 267 (281)
T ss_pred ------------EecCCCCccHHHHHHHHHHH-CCCEEEECChHHCCHHHhCCCCEEEEEcc-CCCC
Confidence 33333333334566666666 7656666442 3355567644 6999877 4443
No 234
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=26.78 E-value=1.4e+02 Score=32.63 Aligned_cols=97 Identities=15% Similarity=0.146 Sum_probs=48.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc-cccceEeccChhhHHH
Q 001960 662 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI-PKIQVMARSSPMDKHT 740 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~-~~~~v~ar~sP~~K~~ 740 (991)
-+++.++++.|++.|+ ..++|.-...... .-+....+ .|.-+ ..+.... .+......-+|+-=..
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~----~~~~~~~~----~g~~~-----~~i~~~~g~~~~~~gKP~p~~~~~ 210 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPL----SDGSRTPG----TGSLV-----AAIETASGRQPLVVGKPSPYMFEC 210 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCC----cCCCcccC----hHHHH-----HHHHHHhCCceeccCCCCHHHHHH
Confidence 6788999999999998 5666654421110 00110000 00000 0000000 0111233344433233
Q ss_pred HHHHHHhhcCCEEEEeCCCC-CChHhhhhCCeeE
Q 001960 741 LVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGL 773 (991)
Q Consensus 741 ~v~~l~~~~g~~v~~iGDG~-ND~~al~~Advgi 773 (991)
+.+.+.-. .+.++||||.. .|..+-+.|++--
T Consensus 211 ~~~~~~~~-~~~~lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 211 ITENFSID-PARTLMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred HHHHhCCC-hhhEEEECCChHHHHHHHHHcCCcE
Confidence 33433322 36799999995 9999999888653
No 235
>PF15584 Imm44: Immunity protein 44
Probab=26.66 E-value=27 Score=30.94 Aligned_cols=20 Identities=25% Similarity=0.596 Sum_probs=15.5
Q ss_pred cCcEEEeCCCCeecccEEEE
Q 001960 258 PGDIVHLCMGDQVPADGLFV 277 (991)
Q Consensus 258 vGDIV~l~~Gd~VPaDgill 277 (991)
+.+-..|+.|++|||||+--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 34456788999999999863
No 236
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=25.09 E-value=4e+02 Score=30.15 Aligned_cols=40 Identities=15% Similarity=0.125 Sum_probs=33.5
Q ss_pred CcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCc
Q 001960 661 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 700 (991)
Q Consensus 661 lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~ 700 (991)
|=.+.++||+..++.|+.|.++--|=..|-+..-..+++.
T Consensus 97 PGsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~ 136 (388)
T COG1916 97 PGSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFW 136 (388)
T ss_pred ChHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHH
Confidence 4456799999999999999999999888888877766653
No 237
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
Probab=25.00 E-value=3e+02 Score=30.77 Aligned_cols=50 Identities=16% Similarity=0.225 Sum_probs=41.3
Q ss_pred CCcEEEEEeeccCCCcccHHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHHH
Q 001960 647 EGYTCIGIVGIKDPMRPGVKESVAICRSA---GITVRMVTGDNINTAKAIARE 696 (991)
Q Consensus 647 ~~l~~lG~~~i~D~lr~~v~~~I~~l~~a---Gi~v~mlTGD~~~ta~~ia~~ 696 (991)
.++.=+=+++=...+-|+..++++.++.. |..|...+-|++.+|++++.-
T Consensus 165 ~~~iKlEvi~e~~~llpd~~~~v~aa~~L~~~Gf~v~~yc~~d~~~a~~l~~~ 217 (326)
T PRK11840 165 WDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDA 217 (326)
T ss_pred CCeEEEEEcCCCCCcccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhc
Confidence 44555556666677889999999999999 999999999999999998874
No 238
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.37 E-value=3.9e+02 Score=29.64 Aligned_cols=63 Identities=17% Similarity=0.258 Sum_probs=34.4
Q ss_pred EeccChhhHHHHHHHHHhh-cCCEEEEeCCCCCC----hHhhhh--CCeeEEecCCCcH--HHHhhcCEEecc
Q 001960 730 MARSSPMDKHTLVKHLRTT-LGEVVAVTGDGTND----APALHE--ADIGLAMGIAGTE--VAKESADVIILD 793 (991)
Q Consensus 730 ~ar~sP~~K~~~v~~l~~~-~g~~v~~iGDG~ND----~~al~~--Advgiamg~~g~~--~ak~~ad~vl~~ 793 (991)
|.-|||.-=.++++...-. .|+.|+++|-+..= +-||.. |-|-++-. ...+ ..-..||+++.-
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs-~T~~l~~~~~~ADIvIsA 208 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHS-RTQDLASITREADILVAA 208 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCC-CCCCHHHHHhhCCEEEEc
Confidence 3446666555555554321 37899999987542 234544 44444433 1222 234669998864
No 239
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=24.36 E-value=1.2e+02 Score=28.23 Aligned_cols=39 Identities=18% Similarity=0.239 Sum_probs=29.6
Q ss_pred CCCcccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Q 001960 659 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 699 (991)
Q Consensus 659 D~lr~~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi 699 (991)
.---+++.++++.+++.|++++.+|++.. ....+.+-|.
T Consensus 53 SG~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 53 SGNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 33456889999999999999999999874 3345555554
No 240
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=24.29 E-value=91 Score=31.89 Aligned_cols=41 Identities=20% Similarity=0.328 Sum_probs=29.6
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHcCCc
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNI--------NTAKAIARECGIL 700 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~--------~ta~~ia~~~gi~ 700 (991)
++-||+.+++++|.+.|..++++|+... .|..-+.+.+|-.
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i 121 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFI 121 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHH
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCC
Confidence 5668999999999999999888888763 4455566665543
No 241
>PLN02591 tryptophan synthase
Probab=24.09 E-value=3.6e+02 Score=29.06 Aligned_cols=78 Identities=22% Similarity=0.262 Sum_probs=44.9
Q ss_pred ccHHHHHHHHHHCCCEE-EEEcCCC-HHHHHHHHHHc-CCccCCceee--eCcccccCCHHHHhhhccccceEec-cChh
Q 001960 663 PGVKESVAICRSAGITV-RMVTGDN-INTAKAIAREC-GILTDNGIAI--EGPEFREKSDEELSKLIPKIQVMAR-SSPM 736 (991)
Q Consensus 663 ~~v~~~I~~l~~aGi~v-~mlTGD~-~~ta~~ia~~~-gi~~~~~~vi--~g~~~~~~~~~~~~~~~~~~~v~ar-~sP~ 736 (991)
++..+..+.|++.|+.. .++|-.. .+....+++.. |.. .++ .|-+ - .| ..|.
T Consensus 118 ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFI----Y~Vs~~GvT-----------------G-~~~~~~~ 175 (250)
T PLN02591 118 EETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFV----YLVSSTGVT-----------------G-ARASVSG 175 (250)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcE----EEeeCCCCc-----------------C-CCcCCch
Confidence 67778888888888874 4444444 34566677664 222 011 1100 0 01 2255
Q ss_pred hHHHHHHHHHhhcCCEEEEeCCCCCCh
Q 001960 737 DKHTLVKHLRTTLGEVVAVTGDGTNDA 763 (991)
Q Consensus 737 ~K~~~v~~l~~~~g~~v~~iGDG~ND~ 763 (991)
+-...++.+++. ...-.++|=|+++.
T Consensus 176 ~~~~~i~~vk~~-~~~Pv~vGFGI~~~ 201 (250)
T PLN02591 176 RVESLLQELKEV-TDKPVAVGFGISKP 201 (250)
T ss_pred hHHHHHHHHHhc-CCCceEEeCCCCCH
Confidence 666778888876 55566679998843
No 242
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=23.88 E-value=47 Score=27.71 Aligned_cols=23 Identities=35% Similarity=0.403 Sum_probs=12.7
Q ss_pred EEeCCeEEEeecCCcccCcEEEe
Q 001960 242 VARNGFRRKISIYDLLPGDIVHL 264 (991)
Q Consensus 242 V~R~G~~~~I~~~dLvvGDIV~l 264 (991)
|..||+...-.-+.|.+||+|.+
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HEETTB----SS----SSEEEEE
T ss_pred eEECCEEccccCCcCCCCCEEEE
Confidence 44588888888899999999998
No 243
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=23.87 E-value=3.2e+02 Score=25.52 Aligned_cols=107 Identities=16% Similarity=0.185 Sum_probs=56.9
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc-cccce-Eec-cChhhHHH
Q 001960 664 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI-PKIQV-MAR-SSPMDKHT 740 (991)
Q Consensus 664 ~v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~-~~~~v-~ar-~sP~~K~~ 740 (991)
+..++++.+.+++.-.+.-+|.....|...+..+.........+.+.+... ......- ..+.+ ++. -.+.+-.+
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~iS~~g~~~~~~~ 78 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPVVLLSDPHLQL---MSAANLTPGDVVIAISFSGETKETVE 78 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCCceEEecCHHHHH---HHHHcCCCCCEEEEEeCCCCCHHHHH
Confidence 356788888888776777777777777777777654332212222211100 0001111 12222 221 22345567
Q ss_pred HHHHHHhhcCC-EEEEeCCCCCChHhhhhCCeeEEec
Q 001960 741 LVKHLRTTLGE-VVAVTGDGTNDAPALHEADIGLAMG 776 (991)
Q Consensus 741 ~v~~l~~~~g~-~v~~iGDG~ND~~al~~Advgiamg 776 (991)
.++.++++ |- +++++++.. .+.-+.+|.-+-..
T Consensus 79 ~~~~a~~~-g~~iv~iT~~~~--~~l~~~~d~~i~~~ 112 (139)
T cd05013 79 AAEIAKER-GAKVIAITDSAN--SPLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHc-CCeEEEEcCCCC--ChhHHhcCEEEEcC
Confidence 78888887 64 555566543 44446777777554
No 244
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=22.98 E-value=2.1e+02 Score=28.93 Aligned_cols=106 Identities=14% Similarity=0.177 Sum_probs=61.4
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHH
Q 001960 665 VKESVAICRSAGITVRMVTGDNINT-AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 743 (991)
Q Consensus 665 v~~~I~~l~~aGi~v~mlTGD~~~t-a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~ 743 (991)
.-++++++++.|-++.+++=++... ...+..-+|+. +..+.=.++++=...++
T Consensus 66 il~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~--------------------------i~~~~~~~~~e~~~~i~ 119 (176)
T PF06506_consen 66 ILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD--------------------------IKIYPYDSEEEIEAAIK 119 (176)
T ss_dssp HHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E--------------------------EEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc--------------------------eEEEEECCHHHHHHHHH
Confidence 3445555555555666655555443 45555555542 23555567888888899
Q ss_pred HHHhhcCCEEEEeCCCCCChHhhhhCCeeEEecCCCcHHHHhhcCEEeccCCchHHHHHHHHHHHHHHHHHH
Q 001960 744 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 815 (991)
Q Consensus 744 ~l~~~~g~~v~~iGDG~ND~~al~~Advgiamg~~g~~~ak~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~k 815 (991)
.+++. |- -+.+|++.- ...-+ +..-..++...+..++..++.+++++++..++
T Consensus 120 ~~~~~-G~-~viVGg~~~-~~~A~----------------~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 120 QAKAE-GV-DVIVGGGVV-CRLAR----------------KLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHT-T---EEEESHHH-HHHHH----------------HTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHc-CC-cEEECCHHH-HHHHH----------------HcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 99887 74 445576521 11111 12234566677789999999999999887664
No 245
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=22.92 E-value=3.6e+02 Score=28.80 Aligned_cols=87 Identities=13% Similarity=0.125 Sum_probs=52.9
Q ss_pred CCcccHHHHHHHHHHCCCEEEEEcCCCHHH----HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccCh
Q 001960 660 PMRPGVKESVAICRSAGITVRMVTGDNINT----AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 735 (991)
Q Consensus 660 ~lr~~v~~~I~~l~~aGi~v~mlTGD~~~t----a~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP 735 (991)
.+=||+.+-++...+.|.+|..+|-+..+. ...=-++.|+.... .+..++-+ .-
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~---------------------~~~~llkk-~~ 179 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVL---------------------ESHLLLKK-DK 179 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccc---------------------ccceEEee-CC
Confidence 345899999999999999999999988665 33334556665321 00001111 11
Q ss_pred hhHHHHHHHHHhhcCCEEEEeCCCCCChHhhhhC
Q 001960 736 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 769 (991)
Q Consensus 736 ~~K~~~v~~l~~~~g~~v~~iGDG~ND~~al~~A 769 (991)
..|..--+.+++- -++|+.+||..+|-......
T Consensus 180 k~Ke~R~~~v~k~-~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 180 KSKEVRRQAVEKD-YKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred CcHHHHHHHHhhc-cceeeEecCchhhhcchhhh
Confidence 1222222333333 47899999999997765443
No 246
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=22.47 E-value=1.7e+02 Score=32.29 Aligned_cols=38 Identities=26% Similarity=0.391 Sum_probs=27.9
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHcCCc
Q 001960 663 PGVKESVAICRSAGITVRMVTGDNINTA-KAIARECGIL 700 (991)
Q Consensus 663 ~~v~~~I~~l~~aGi~v~mlTGD~~~ta-~~ia~~~gi~ 700 (991)
+|+...-+.|++.|.+++++|.+....+ .+..+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 5677778889999999999998775544 4455555553
No 247
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.16 E-value=1.1e+03 Score=25.96 Aligned_cols=166 Identities=18% Similarity=0.221 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCccc--HHHHHHHHHHCCCEEEE
Q 001960 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~--v~~~I~~l~~aGi~v~m 681 (991)
+.++.++++.+.++++.++|.+. . |+++-.-|.+-.. ++...+.|++.|+.+..
T Consensus 9 ~a~~i~~~l~~~v~~l~~~g~~P-~-----------------------Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14166 9 LSAKIKEELKEKNQFLKSKGIES-C-----------------------LAVILVGDNPASQTYVKSKAKACEECGIKSLV 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCc-e-----------------------EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44566677778888887777543 2 2333333433332 46778899999998666
Q ss_pred EcCCC---HHHHHHHHHHcCCccC-CceeeeCcccccCCHHHH------------------hhhccc-cceEeccChhhH
Q 001960 682 VTGDN---INTAKAIARECGILTD-NGIAIEGPEFREKSDEEL------------------SKLIPK-IQVMARSSPMDK 738 (991)
Q Consensus 682 lTGD~---~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~------------------~~~~~~-~~v~ar~sP~~K 738 (991)
.-=+. .+...+.-++++=+.. +++.+.-+-...++++++ .+++.. -.-|.-|||.-=
T Consensus 65 ~~l~~~~t~~~l~~~I~~lN~D~~V~GIivq~PLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~PcTp~av 144 (282)
T PRK14166 65 YHLNENTTQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISSKDVDGFHPINVGYLNLGLESGFLPCTPLGV 144 (282)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhcCCCCCCcCCCHHHH
Confidence 53332 3334444444443221 234443332223333332 222211 113445666655
Q ss_pred HHHHHHHHh-hcCCEEEEeCCCCCC----hHhhhhCCeeEEecCCCcH-H--HHhhcCEEecc
Q 001960 739 HTLVKHLRT-TLGEVVAVTGDGTND----APALHEADIGLAMGIAGTE-V--AKESADVIILD 793 (991)
Q Consensus 739 ~~~v~~l~~-~~g~~v~~iGDG~ND----~~al~~Advgiamg~~g~~-~--ak~~ad~vl~~ 793 (991)
.++++...- -.|+.|+++|-+..= +-+|...+.-+.+-.+-|. . .-..||+++.-
T Consensus 145 i~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 145 MKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 555555431 137899999988652 3355555544443223332 2 34678988754
No 248
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=20.86 E-value=6.1e+02 Score=22.99 Aligned_cols=99 Identities=18% Similarity=0.160 Sum_probs=58.4
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh-c--cccceEeccChhhHHHH
Q 001960 665 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL-I--PKIQVMARSSPMDKHTL 741 (991)
Q Consensus 665 v~~~I~~l~~aGi~v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~-~--~~~~v~ar~sP~~K~~~ 741 (991)
..+.++.|++.+++++++.-|.... .-+++-|. .++.|+..+ ++.+++. + .+..+.+-.+++....+
T Consensus 10 ~~~i~~~L~~~~~~vvvid~d~~~~--~~~~~~~~-----~~i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~~n~~~ 79 (116)
T PF02254_consen 10 GREIAEQLKEGGIDVVVIDRDPERV--EELREEGV-----EVIYGDATD---PEVLERAGIEKADAVVILTDDDEENLLI 79 (116)
T ss_dssp HHHHHHHHHHTTSEEEEEESSHHHH--HHHHHTTS-----EEEES-TTS---HHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEECCcHHH--HHHHhccc-----ccccccchh---hhHHhhcCccccCEEEEccCCHHHHHHH
Confidence 4678899999888999998887652 33344443 355554432 2233222 1 22234444456666777
Q ss_pred HHHHHhhcC-CEEEEeCCCCCChHhhhhCCeeE
Q 001960 742 VKHLRTTLG-EVVAVTGDGTNDAPALHEADIGL 773 (991)
Q Consensus 742 v~~l~~~~g-~~v~~iGDG~ND~~al~~Advgi 773 (991)
...+++..+ ..+.+.-+..+....|+.+++-.
T Consensus 80 ~~~~r~~~~~~~ii~~~~~~~~~~~l~~~g~d~ 112 (116)
T PF02254_consen 80 ALLARELNPDIRIIARVNDPENAELLRQAGADH 112 (116)
T ss_dssp HHHHHHHTTTSEEEEEESSHHHHHHHHHTT-SE
T ss_pred HHHHHHHCCCCeEEEEECCHHHHHHHHHCCcCE
Confidence 777777533 35666666667777788776543
No 249
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=20.78 E-value=98 Score=28.16 Aligned_cols=31 Identities=29% Similarity=0.397 Sum_probs=23.8
Q ss_pred CcEEEEEeCCeEEEeecCCcccCcEEEeCCCCee
Q 001960 237 KITVQVARNGFRRKISIYDLLPGDIVHLCMGDQV 270 (991)
Q Consensus 237 ~~~v~V~R~G~~~~I~~~dLvvGDIV~l~~Gd~V 270 (991)
...|.+ ||+.. -++.++++||+|.|.-|...
T Consensus 33 ~GrV~v--NG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 33 GGRVKV--NGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred CCeEEE--CCEEc-ccccccCCCCEEEEEeCCcE
Confidence 334444 78766 78999999999999988753
No 250
>PRK00087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed
Probab=20.46 E-value=4.6e+02 Score=32.65 Aligned_cols=140 Identities=12% Similarity=0.141 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHcccceeeeeEEecCCCC-----CCC----------CCCCCCCcEEEEEeeccCCCcccHHHHHHHHHH
Q 001960 610 NHLNETIEKFASEALRTLCLACMEIGNEF-----SAD----------APIPTEGYTCIGIVGIKDPMRPGVKESVAICRS 674 (991)
Q Consensus 610 ~~~~~~~~~~a~~glR~l~~A~~~l~~~~-----~~~----------~~~~e~~l~~lG~~~i~D~lr~~v~~~I~~l~~ 674 (991)
.++.+.+..++.+|+.++.++.+..++-. ..+ .+.+.. ..-++++.=--....+..+.++.|++
T Consensus 100 ~k~~~~~~~~~~~g~~ivi~G~~~HpEv~g~~g~~~~~~~vv~~~~~~~~~~~-~~~~~~~~QTT~~~~~~~~~~~~l~~ 178 (647)
T PRK00087 100 KNIQKLAKKYYEEGYQIVIVGDKNHPEVIGINGWCNNSAIIVEDGEEAEKLPF-DKKICVVSQTTEKQENFEKVLKELKK 178 (647)
T ss_pred hHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccccCCCEEEECCHHHHhhCCC-CCCEEEEEcCCCcHHHHHHHHHHHHH
Confidence 45778889999999999999977655420 000 000000 12255555555556666777777776
Q ss_pred CCCE------EEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhccccceEeccChhhHHHHHHHHHhh
Q 001960 675 AGIT------VRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTT 748 (991)
Q Consensus 675 aGi~------v~mlTGD~~~ta~~ia~~~gi~~~~~~vi~g~~~~~~~~~~~~~~~~~~~v~ar~sP~~K~~~v~~l~~~ 748 (991)
..-. +.-.|-+.+..+..+|+++.+. + |.+......-.++++..++.
T Consensus 179 ~~~~~~~~~tiC~at~~Rq~a~~~la~~~d~~----~-----------------------vvGg~~SsNt~~L~~i~~~~ 231 (647)
T PRK00087 179 KGKEVKVFNTICNATEVRQEAAEKLAKKVDVM----I-----------------------VVGGKNSSNTTKLYEICKSN 231 (647)
T ss_pred hCCCcccCCCcchhhhhHHHHHHHHHhhCCEE----E-----------------------EECCCCCccHHHHHHHHHHH
Confidence 5433 3445666677777777766553 2 33333333344566666666
Q ss_pred cCCEEEEeCCCCC--ChHhhhhC-CeeEEecCCCc
Q 001960 749 LGEVVAVTGDGTN--DAPALHEA-DIGLAMGIAGT 780 (991)
Q Consensus 749 ~g~~v~~iGDG~N--D~~al~~A-dvgiamg~~g~ 780 (991)
|..+..+-+- + |...++.+ .|||.-| ++|
T Consensus 232 -~~~~~~ie~~-~el~~~~~~~~~~vgitag-aSt 263 (647)
T PRK00087 232 -CTNTIHIENA-GELPEEWFKGVKIIGVTAG-AST 263 (647)
T ss_pred -CCCEEEECCh-HHCCHHHhCCCCEEEEEec-cCC
Confidence 7667776543 3 33566655 4888877 444
No 251
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=20.33 E-value=83 Score=31.32 Aligned_cols=24 Identities=29% Similarity=0.486 Sum_probs=20.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC
Q 001960 662 RPGVKESVAICRSAGITVRMVTGD 685 (991)
Q Consensus 662 r~~v~~~I~~l~~aGi~v~mlTGD 685 (991)
-++|++++++|++.|++++|+|--
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred chhHHHHHHHHHhcCCeEEEEeCc
Confidence 357999999999999999999953
No 252
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=20.31 E-value=1.1e+02 Score=27.04 Aligned_cols=29 Identities=24% Similarity=0.189 Sum_probs=22.1
Q ss_pred CcEEEEEeCCeEEEeecCCcccCcEEEeC
Q 001960 237 KITVQVARNGFRRKISIYDLLPGDIVHLC 265 (991)
Q Consensus 237 ~~~v~V~R~G~~~~I~~~dLvvGDIV~l~ 265 (991)
+....+.++|..+.+.+.+|++||.|.+.
T Consensus 71 ~H~~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 71 DHLLLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred CCEEEEecCCcEEEEEHHHCCCCCEEEec
Confidence 34555666777778999999999999764
No 253
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.28 E-value=1.2e+03 Score=25.73 Aligned_cols=164 Identities=17% Similarity=0.211 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHHHHcccceeeeeEEecCCCCCCCCCCCCCCcEEEEEeeccCCCccc--HHHHHHHHHHCCCEEEE
Q 001960 604 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPG--VKESVAICRSAGITVRM 681 (991)
Q Consensus 604 l~~~~~~~~~~~~~~~a~~glR~l~~A~~~l~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~--v~~~I~~l~~aGi~v~m 681 (991)
+.++.++++.+.++.+.++|.+. . |+++-..|.+-.. ++..++.|++.||++..
T Consensus 9 iA~~i~~~ik~~v~~l~~~g~~P-~-----------------------LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 64 (282)
T PRK14182 9 IAAKVKGEVATEVRALAARGVQT-G-----------------------LTVVRVGDDPASAIYVRGKRKDCEEVGITSVE 64 (282)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCC-e-----------------------EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 34556677788888887766543 2 3344444443332 36778999999998665
Q ss_pred Ec--CC-CHHHHHHHHHHcCCccC-CceeeeCcccccCCHHHH------------------hhhccccce-EeccChhhH
Q 001960 682 VT--GD-NINTAKAIARECGILTD-NGIAIEGPEFREKSDEEL------------------SKLIPKIQV-MARSSPMDK 738 (991)
Q Consensus 682 lT--GD-~~~ta~~ia~~~gi~~~-~~~vi~g~~~~~~~~~~~------------------~~~~~~~~v-~ar~sP~~K 738 (991)
.- .| .++...+.-++++-+.. +++.+.-+-...+++.++ .+++..-.- +.-|||.-=
T Consensus 65 ~~l~~~~t~~~l~~~I~~lN~d~~V~GIivqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~~PcTp~av 144 (282)
T PRK14182 65 HHLPATTTQAELLALIARLNADPAVHGILVQLPLPKHVDERAVLDAISPAKDADGFHPFNVGALSIGIAGVPRPCTPAGV 144 (282)
T ss_pred EECCCCCCHHHHHHHHHHHhCCCCCCEEEEeCCCCCCCCHHHHHhccCcccCcCCCCHhHHHHHhCCCCCCCCCCCHHHH
Confidence 43 33 23334444455543322 234443332233333332 222211111 345566555
Q ss_pred HHHHHHHHhh-cCCEEEEeCCCCCC----hHhhhh--CCeeEEecCCCcH-H--HHhhcCEEecc
Q 001960 739 HTLVKHLRTT-LGEVVAVTGDGTND----APALHE--ADIGLAMGIAGTE-V--AKESADVIILD 793 (991)
Q Consensus 739 ~~~v~~l~~~-~g~~v~~iGDG~ND----~~al~~--Advgiamg~~g~~-~--ak~~ad~vl~~ 793 (991)
.++++..+-. .|+.|.++|.+..= +-||.. |-|-++- +.|. . .-..||+++.-
T Consensus 145 i~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtich--s~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 145 MRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAH--SRTADLAGEVGRADILVAA 207 (282)
T ss_pred HHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeC--CCCCCHHHHHhhCCEEEEe
Confidence 5555443211 37899999988542 335543 4444443 2232 2 33568988764
No 254
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=20.14 E-value=2.1e+02 Score=25.09 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=39.3
Q ss_pred EEeeccC---CCcccHHHHHHHHHHCCCEEEEE-cCCCHHHHHHHHHHcCCc
Q 001960 653 GIVGIKD---PMRPGVKESVAICRSAGITVRMV-TGDNINTAKAIARECGIL 700 (991)
Q Consensus 653 G~~~i~D---~lr~~v~~~I~~l~~aGi~v~ml-TGD~~~ta~~ia~~~gi~ 700 (991)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+.
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p 54 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIP 54 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTES
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCe
Confidence 4566666 77788899999999999998888 667777888888888875
Done!