Query 001963
Match_columns 990
No_of_seqs 269 out of 1264
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 06:30:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 3E-164 9E-169 1547.8 88.5 893 23-988 68-1045(1045)
2 2wyh_A Alpha-mannosidase; hydr 100.0 1E-123 4E-128 1173.1 77.0 805 25-987 15-923 (923)
3 3lvt_A Glycosyl hydrolase, fam 100.0 1E-115 5E-120 1090.4 73.7 799 33-985 4-898 (899)
4 1o7d_A Lysosomal alpha-mannosi 100.0 1E-76 3.5E-81 644.6 32.8 294 23-318 1-297 (298)
5 1o7d_D Lysosomal alpha-mannosi 100.0 7.1E-60 2.4E-64 501.2 29.0 251 596-852 2-273 (282)
6 1o7d_C Lysosomal alpha-mannosi 100.0 2.6E-30 9E-35 257.3 16.8 150 395-576 2-151 (159)
7 1o7d_E Lysosomal alpha-mannosi 99.9 1.1E-26 3.7E-31 217.6 10.9 119 862-989 3-123 (126)
8 1o7d_B Lysosomal alpha-mannosi 99.9 1.8E-23 6.1E-28 178.8 6.9 74 316-389 2-75 (84)
9 1k1x_A 4-alpha-glucanotransfer 99.8 1E-17 3.5E-22 200.7 27.5 144 35-193 3-147 (659)
10 3p0b_A TT1467 protein; glycosi 98.7 6.6E-08 2.3E-12 111.0 14.7 285 99-411 135-481 (540)
11 3n98_A Alpha-amylase, GH57 fam 98.7 7.1E-08 2.4E-12 111.3 13.8 91 99-191 114-220 (562)
12 2b5d_X Alpha-amylase; (beta/al 98.7 3.4E-06 1.2E-10 98.6 26.4 151 36-192 3-208 (528)
13 3rxz_A Polysaccharide deacetyl 95.1 1.7 5.9E-05 46.7 21.4 276 29-349 18-299 (300)
14 3s6o_A Polysaccharide deacetyl 94.2 4.1 0.00014 44.2 21.7 222 71-334 85-308 (321)
15 3cl6_A PUUE allantoinase; URIC 94.2 2.8 9.7E-05 45.2 20.3 107 72-192 81-189 (308)
16 3qbu_A Putative uncharacterize 91.3 7.1 0.00024 42.4 18.4 108 71-191 73-182 (326)
17 2y8u_A Chitin deacetylase; hyd 89.5 1.5 5E-05 45.3 10.3 102 74-188 47-150 (230)
18 2cc0_A Acetyl-xylan esterase; 87.9 1.8 6.1E-05 43.3 9.4 101 74-187 19-121 (195)
19 2iw0_A Chitin deacetylase; hyd 75.5 4.9 0.00017 42.0 7.3 106 74-188 56-164 (254)
20 1ny1_A Probable polysaccharide 75.3 5.1 0.00017 41.4 7.3 100 76-188 60-162 (240)
21 2j13_A Polysaccharide deacetyl 73.0 5.7 0.00019 41.3 7.0 100 76-188 72-174 (247)
22 3vus_A Poly-beta-1,6-N-acetyl- 72.2 11 0.00038 39.6 9.1 81 109-192 126-234 (268)
23 2vyo_A ECU11_0510, chitooligos 72.1 7.6 0.00026 40.4 7.7 101 75-187 42-149 (254)
24 4f9d_A Poly-beta-1,6-N-acetyl- 67.5 6.5 0.00022 46.4 6.5 81 109-192 130-238 (618)
25 2c71_A Glycoside hydrolase, fa 66.4 15 0.00052 37.1 8.3 88 75-173 21-109 (216)
26 2c1i_A Peptidoglycan glcnac de 62.1 22 0.00074 40.1 9.3 97 75-186 252-349 (431)
27 4hd5_A Polysaccharide deacetyl 54.5 9.5 0.00033 41.7 4.4 79 108-192 246-325 (360)
28 1u69_A Hypothetical protein; s 54.3 4.8 0.00017 38.9 1.9 18 161-178 106-124 (163)
29 2w3z_A Putative deacetylase; P 37.9 50 0.0017 35.3 6.9 102 74-187 122-236 (311)
30 1ldd_A APC2WHB, anaphase promo 26.9 38 0.0013 27.8 2.7 23 106-128 48-71 (74)
31 4esj_A Type-2 restriction enzy 25.6 77 0.0026 32.0 5.1 59 70-128 188-253 (257)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=2.6e-164 Score=1547.78 Aligned_cols=893 Identities=25% Similarity=0.423 Sum_probs=749.4
Q ss_pred eeecCCCCCCCCeeEEEEEeCccCCCccchhhhheeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHh
Q 001963 23 MMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWR 102 (990)
Q Consensus 23 ~~~~~~~~~~~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~w~~ 102 (990)
+.|+.+.+....+++||+|||||||+||+||+++||. +.++++|++|+++|+++|++||+|+|++||++||+
T Consensus 68 ~~~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~--------~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~w~~ 139 (1045)
T 3bvx_A 68 IKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFARFYH 139 (1045)
T ss_dssp CCCCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHH
T ss_pred hhhhccccCCCCceEEEEEecCCCCccccchHHHhhh--------HHHHHHHHHHHHHHHHCCCcEEEEecHHHHHHHHH
Confidence 3355444444558999999999999999999999996 67899999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchhhHHHHHhh
Q 001963 103 DQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAE 182 (990)
Q Consensus 103 ~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~ 182 (990)
+++|+.+++||+||++|||||+||||||+|||++||||+||||++||+|++++||+.|++||+|||||||+++|||| ++
T Consensus 140 e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil-~~ 218 (1045)
T 3bvx_A 140 DLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL-QK 218 (1045)
T ss_dssp HSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHH-HT
T ss_pred HCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCCCCccHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCcEEEEeecCHHHHHHhhhcCceeEEEeeCCCCCCCCceeEeeCCC-CCCC-----CCC----CCccccCCC---CCC
Q 001963 183 VGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPK-NYEP-----PSD----NFYFEVGDT---SPI 249 (990)
Q Consensus 183 ~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~~s~i~t~~~~~-~Y~~-----p~~----~f~f~~~~~---~~p 249 (990)
|||++++++|++|++++.|+..+.+||+|+|+|+..+|++||||++|. +|+. |++ +|+|+.+.. .||
T Consensus 219 ~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~dGs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~~~~~~~~ 298 (1045)
T 3bvx_A 219 SGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKGDTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMGSFGLSCP 298 (1045)
T ss_dssp TTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSCTTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSSTTSCCCT
T ss_pred cCCCeEEEecccccccccccccCCceEEEeCCCCCCCCCeEEEEeccccccCcccccCCCccccccccccccccccccCc
Confidence 999999999999999999999999999999776655699999999994 6753 323 355655432 355
Q ss_pred ccCC-ccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHH---HHHHHHHHHHHhcCC--CeeEEeCC
Q 001963 250 VQDD-MNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTW---FRQMDKFIHYVNQDG--RVNALYST 323 (990)
Q Consensus 250 ~~~~-~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~y~~a~~~---~~~~~~li~~~N~~~--~~~i~~sT 323 (990)
+.++ ..+.++|++++++.|++++++++..|+++++|+|+|+||+|.++.+| |+||++||+++|+.+ .++++|||
T Consensus 299 ~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~~~v~~sT 378 (1045)
T 3bvx_A 299 WKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFNVQAQFGT 378 (1045)
T ss_dssp TSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGCEEEEECC
T ss_pred ccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCCCCceEEECC
Confidence 5444 35678899999999999999999999999999999999999998766 999999999999764 58999999
Q ss_pred hhhHHHHHHhcC----CCCCcccCCCccccccCCCceeeeeecccchhhHHHHhhHHHHHHHHHHhhccc---ccCCCch
Q 001963 324 PSMYIDAKYAAN----ESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR---NEVGLST 396 (990)
Q Consensus 324 ~~~Yf~a~~~~~----~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~---~~~~~~~ 396 (990)
+++||++++++. ..||+++||||||+++.++||+|||||||++|+++|++|++|++||+|++++.. .++...+
T Consensus 379 ~~~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~~~~~~~L 458 (1045)
T 3bvx_A 379 LQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGMARIEERL 458 (1045)
T ss_dssp HHHHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGGGCHHHHH
T ss_pred HHHHHHHHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHH
Confidence 999999998753 369999999999999999999999999999999999999999999999999743 4556678
Q ss_pred HHHHHHHHhhhccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC---cccccccCcccccCC
Q 001963 397 DSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPI---TNFQQCPLLNISYCP 473 (990)
Q Consensus 397 ~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~---~~~~~~~~~n~s~~~ 473 (990)
+++|++|+++||||+||||++++|++||.+||.+|...++.+++.+++.|+......+..+. .+++.|.+++.+.||
T Consensus 459 ~~~wk~lll~QhHD~i~Gts~~~V~~d~~~rl~~a~~~~~~l~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (1045)
T 3bvx_A 459 EQARRELSLFQHHDGITGTAKTHVVVDYEQRMQEALKACQMVMQQSVYRLLTKPSIYSPDFSFSYFTLDDSRWPGSGVED 538 (1045)
T ss_dssp HHHHHHHHHHTBTTTTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCTTTCCCCTTSCSEEEECSSSSCTTTCC
T ss_pred HHHHHHHhccccccCCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccchhhhccccccccc
Confidence 99999999999999999999999999999999999999999999999999853221111111 123345556777777
Q ss_pred CCccccCCCC---cEEEEEEcCCCceeeEEEEEEEcCceEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCC
Q 001963 474 PSEVDLSSGK---SLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVT 550 (990)
Q Consensus 474 ~~~~~~~~~~---~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (990)
....-...++ ...|+|||||+|+|+++|+|+|+.+.+.|+|.+|++|++|+++.+.....+....+ ......
T Consensus 539 ~~~~i~~~~~~~~~~~vvvfN~L~~~r~~~V~v~v~~~~~~V~D~~G~~v~~Qi~~~~~~~~~~~~~~~-----~~~~~~ 613 (1045)
T 3bvx_A 539 SRTTIILGEDILPSKHVVMHNTLPHWREQLVDFYVSSPFVSVTDLANNPVEAQVSPVWSWHHDTLTKTI-----HPQGST 613 (1045)
T ss_dssp CCCEECCBTTTBSEEEEEEEECSSSCEEEEEEEEESCSCEEEEETTCCEECEEEEEEEEEEEETTTTEE-----EEEEEE
T ss_pred ccccccccccccCCceEEEEcCCCcceeeEEEEEeccCceEEEcCCCCEEeEEEeeccccccccccccc-----cccCCC
Confidence 5421000122 56899999999999999999999999999999999999999987653221100000 000012
Q ss_pred CcEEEEEEeecCCCceEEEEEEecCcccCcccccee----------eec-cccCCCceEEcCCeE------EEEEeCCCC
Q 001963 551 PSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTV----------YKS-QIRQNDTIEVGPGNL------KLLYSGKRA 613 (990)
Q Consensus 551 ~~~~l~f~~~vP~lG~~~y~i~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~ieN~~~------~l~~~~~~G 613 (990)
..|+|+|.++||||||++|.|............+.+ ... .....+...|||++| +|+||+ +|
T Consensus 614 ~~~~L~f~a~vP~lG~~ty~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~leN~~~~~~~~~~v~fd~-~G 692 (1045)
T 3bvx_A 614 TKYRIIFKARVPPMGLATYVLTISDSKPEHTSYASNLLLRKNPTSLPLGQYPEDVKFGDPREISLRVGNGPTLAFSE-QG 692 (1045)
T ss_dssp EEEEEEEEEEECTTEEEEEEEEECSSCCTTEEECEEEEECSSCCCCCCTTCSSCCEEECCCCEEEECTTSCEEEECT-TS
T ss_pred CcEEEEEEeccCCceeEEEEEEecCCccccccccceeecccccccccccccccCCCceeecccccccccccEEEECC-CC
Confidence 457899999999999999999876543210000011 000 001234478999999 999995 99
Q ss_pred eEEEEEecCCCcEEEEEEEEEEeeccCC-----CC------------CCeeeEEEEeCCceEEEEEEecCeEEEEEEEec
Q 001963 614 KLMRYINSKTSVNKLLEQSYIYYRGDDG-----SK------------DLQLSFTILRGPLLDEVHQRINPWIYQVTRVYK 676 (990)
Q Consensus 614 ~l~si~dk~~g~~~~~~~~f~~Y~~~~g-----~~------------~~~~~i~v~~Gpl~~~v~~~~~~~i~~~vrLy~ 676 (990)
.|+||+||++|+++.+.++|.+|.+.+| .+ .....+.+++||++++|++.+ ++++|++||
T Consensus 693 ~L~si~dk~~g~e~~~~~~f~~Y~~~~~~~~sgaY~F~P~~~~~~~~~~~~~~~v~~Gpl~~ev~~~~-~~i~q~irL-- 769 (1045)
T 3bvx_A 693 LLKSIQLTQDSPHVPVHFKFLKYGVRSHGDRSGAYLFLPNGPASPVELGQPVVLVTKGKLESSVSVGL-PSVVHQTIM-- 769 (1045)
T ss_dssp CEEEEECSTTSCCEEEEEEEEEECBCSSSCCCCSSCCCBSSSCEECCCCSCCEEEEECSSCEEEEEEE-TTEEEEEEE--
T ss_pred cEEEEEEcCCCeEEEEeeEEEEEecccCCCCCcceEecCCCCCcccccCCceEEEEeCCeEEEEEEEE-eeEEEEEEE--
Confidence 9999999999999999999999965422 22 112456789999999999999 589999999
Q ss_pred CCCceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeEEEcCCCccceeeccccccCcccccccccccceEeccceeeEE
Q 001963 677 GKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQPIAGNYYPVNLGIYMK 756 (990)
Q Consensus 677 ~~~~ie~e~~V~~i~~~~~~~~e~~~~f~t~I~s~~~fYTDsNG~~~ikR~~~~r~~w~~~~~~pv~~NyYPv~s~~~I~ 756 (990)
++++|||+++|+ |.+..|||++++|+|+|+|++.||||+||||+++|+++. .+|+++|||||+++|+|+
T Consensus 770 ~~~~ieie~~Vd---~~~~~~~el~~rf~t~i~s~~~fyTD~nG~~~ikR~~~~--------~~p~~~NyYPv~s~~~i~ 838 (1045)
T 3bvx_A 770 RGGAPEIRNLVD---IGSLDNTEIVMRLETHIDSGDIFYTDLNGLQFIKRRRLD--------KLPLQANYYPIPSGMFIE 838 (1045)
T ss_dssp SSSSCEEEEEEC---CTTCTTEEEEEEEEECCCCTTEEEEEETTTEEEEEECCT--------TSCGGGGCEEESSEEEEE
T ss_pred CCeeEEEEEEEe---cCCCCCeEEEEEeecccCCCCeEEEecCCceeEEcCCCC--------CCCcccceEEeeeeEEEE
Confidence 788999999995 454569999999999999988999999999999999874 478999999999999999
Q ss_pred ecCcceEEEecccccccccCCCeEEEEEEEEeeccCCcCccccccccccccccccCeEEeeEEEEEecCccchhh-----
Q 001963 757 DNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYLRIDPVGEAAK----- 831 (990)
Q Consensus 757 D~~~~ltvl~Drs~G~sSl~~G~iElmL~Rr~~~DD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l~l~~~~~~~~----- 831 (990)
|++.|||||+||+|||||+++|+||||||||+++||+|||||||+|+ ++++|+|||+|++...++.
T Consensus 839 D~~~~ltvl~drs~G~sSl~~G~lElmlhRrl~~DD~rGvge~l~d~---------~~~~~~~~l~l~~~~~~~~~~~~~ 909 (1045)
T 3bvx_A 839 DANTRLTLLTGQPLGGSSLASGELEIMQDRRLASDDERGLGQGVLDN---------KPVLHIYRLVLEKVNNCVRPSKLH 909 (1045)
T ss_dssp CSSEEEEEEESSCEEEECCSTTEEEEEEEEEBCSCCSSSCCSCBCCC---------CCEEEEEEEEEEECTTSCCCCTTC
T ss_pred cCCeeEEEEecCCccccccCCCeEEEEEeeeeccCCcccccccccCC---------ceeeeEEEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999999999986 4699999999997764331
Q ss_pred -------hcccchhhhccCceeeecccCCCccccccccccccCccccCCCCcceEEEeeecCCCc-----EEEEEecc--
Q 001963 832 -------WRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDSGK-----ILLRLAHL-- 897 (990)
Q Consensus 832 -------~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~nvhlltl~~~~~~~-----illRl~~l-- 897 (990)
..|..++++++|++++++.... +. ....+|+++.. +|||||||+|||++++++ +|||| |.
T Consensus 910 ~~~~~s~~~~~~~~~l~~p~~~~~~~~~~--~~-~~~~~~~~l~~--~lP~~vhlltL~~~~~~~~~~~~~ll~L-~~~~ 983 (1045)
T 3bvx_A 910 PAGYLTSAAHKASQSLLDPLDKFIFAENE--WI-GAQGQFGGDHP--SAREDLDVSVMRRLTKSSAKTQRVGYVL-HRTN 983 (1045)
T ss_dssp SEECCCHHHHHHHHHHHSCCEEEEECSSC--CT-TBCSEECTTSC--CCCTTEEEEEEEECSCTTCSEEEEEEEE-EECC
T ss_pred cccccCHHHHHHHHHHhCCcceeeccCcc--cc-cccccCCcccc--cCCCCEEEEEeEecCCCCccCceEEEEE-eeec
Confidence 2456788999999998876322 22 24567888764 899999999999999888 99999 55
Q ss_pred ccccccCCCcceeeeeccccCCcCccceEEeccccccchhhHhhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCc
Q 001963 898 YEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPM 977 (990)
Q Consensus 898 ~~~~~~~~~s~~~~v~l~~lf~~~~~~~i~EtsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~Pm 977 (990)
|+++++.. +++++|||.+||.. +.+++||||||++.++++. +...|+|+||
T Consensus 984 ~~~~~~~~-s~~~~~~l~~lf~~--i~~~~etsL~~~~~~~~~~--------------------------~~~~v~l~Pm 1034 (1045)
T 3bvx_A 984 LMQCGTPE-EHTQKLDVCHLLPN--VARCERTTLTFLQNLEHLD--------------------------GMVAPEVCPM 1034 (1045)
T ss_dssp CCCCSCCC-CCCCCCCGGGSSSS--EEEEEEECTTSCSEEEECG--------------------------GGCCCCCCTT
T ss_pred cccCcCcc-cCcccccHHHHhcC--cceEEEecccCCccccccC--------------------------CCcceEEcCc
Confidence 88988766 78999999999998 9999999999998776541 1236899999
Q ss_pred ceeEEEEEEee
Q 001963 978 EIRTFVIEFYS 988 (990)
Q Consensus 978 eIrTf~i~~~~ 988 (990)
|||||+|++++
T Consensus 1035 eirTf~i~~~~ 1045 (1045)
T 3bvx_A 1035 ETAAYVSSHSS 1045 (1045)
T ss_dssp CEEEEEEEEEC
T ss_pred eeEEEEEEeeC
Confidence 99999999874
No 2
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=1.1e-123 Score=1173.08 Aligned_cols=805 Identities=15% Similarity=0.171 Sum_probs=637.5
Q ss_pred ecCCCCCCCCeeEEEEEeCccCCCccchhhhheeeccCccchhhhHHHHHHHHHHHHHhCCCCe-EEEechhHHHHHHhc
Q 001963 25 YNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRK-FIYVEQAFFQRWWRD 103 (990)
Q Consensus 25 ~~~~~~~~~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~k-F~~~e~~~~~~w~~~ 103 (990)
|++|+..++++++||+|||||+|+||+||+++|+ .+++++|++|+++|+++|+++ |+|+|++++.+||.+
T Consensus 15 ~~~~~~~~~~~~~v~~v~HsH~D~~Wl~t~~~~~---------~~~~~~~~~vl~~l~~~p~~~~F~~~~q~~~~~~~~~ 85 (923)
T 2wyh_A 15 EVLFQGPAMATKKVHIISHSHWDREWYMAYEQHH---------MRLINLIDDLLEVFQTDPDFHSFHLDGQTIILDDYLK 85 (923)
T ss_dssp HHHSCCCCCCCEEEEEEEBCBCCSSSSSCHHHHH---------HHHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHH
T ss_pred hhccCCCCCCceEEEEEccCCCCcccccHHHHHH---------HHHHHHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHH
Confidence 8899999999999999999999999999999998 689999999999999999998 999999888899999
Q ss_pred CCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchhhHHHHHhhc
Q 001963 104 QSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEV 183 (990)
Q Consensus 104 ~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~ 183 (990)
++|+.+++||+||++||||+ ||||||+||+++|+||+||||++||+|+++ ||+.|++||+|||||||++||||| ++|
T Consensus 86 ~~p~~~~~vk~lV~~Grlei-G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~pD~FG~s~~lPqil-~~~ 162 (923)
T 2wyh_A 86 VRPEREPEIRQAIASGKLRI-GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WGASVPLGYFPDTFGNMGQTPQLM-LKA 162 (923)
T ss_dssp HCGGGHHHHHHHHHTTSEEC-CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HTCCCSSEEESSCSSBCTTHHHHH-HTT
T ss_pred HCHHHHHHHHHHHHcCCEEE-eeeeeccccccCCHHHHHHHHHHHHHHHHH-cCCCCceeEecCCCCcchHHHHHH-HHc
Confidence 99999999999999999996 554599999999999999999999999999 999999999999999999999999 999
Q ss_pred CCcEEEEeecC----HHHH---HHhhhcCceeEEEeeCCCCCCCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCccc
Q 001963 184 GFDFLFFARID----YQDR---AKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNL 256 (990)
Q Consensus 184 G~~~~~~~Ri~----~~~k---~~~~~~~~~eF~W~g~d~~~~~s~i~t~~~~~~Y~~p~~~f~f~~~~~~~p~~~~~~~ 256 (990)
||++++++|++ |+++ ..+...+.++|+|+|+| ||+||||++|.+|+.+ ..+ . .
T Consensus 163 Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~d----Gs~Ilt~~~p~~Y~~g-~~~-----------~----~ 222 (923)
T 2wyh_A 163 GLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPD----NSRILGLLFANWYSNG-NEI-----------P----T 222 (923)
T ss_dssp TCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECTT----CCEEEEEECTTCTTTT-CSC-----------C----S
T ss_pred CCCEEEEEeccccccccccccchhhccCCCceEEEECCC----CCeEEEEECCCCccCC-CCC-----------C----C
Confidence 99999999999 7754 23344577899999999 9999999999999866 111 0 1
Q ss_pred cCCChHHHHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHhc-CCCeeEEeCChhhHHHHHHhc-
Q 001963 257 FDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQ-DGRVNALYSTPSMYIDAKYAA- 334 (990)
Q Consensus 257 ~~~nv~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~y~~a~~~~~~~~~li~~~N~-~~~~~i~~sT~~~Yf~a~~~~- 334 (990)
+..|++++++.+++.+++ .++++++|+|+|+||+|.. ++|+++|+++|+ .+.++++|||+++||++++++
T Consensus 223 ~~~~v~~~~~~~~~~~~~---~~~t~~~l~~~G~D~~~~~-----~~~~~~i~~~n~~~~~~~~~~sT~~~yf~~l~~~~ 294 (923)
T 2wyh_A 223 TEAEARLFWDKKLADAER---FASTKHLLMMNGCDHQPVQ-----LDVTKAIALANQLYPDYEFVHSCFEDYLADLADDL 294 (923)
T ss_dssp SHHHHHHHHHHHHHHHHH---HCSSSEEEEEECCBTCCCC-----TTHHHHHHHHHHHCTTEEEEECCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHh---cCCCCeEEEEeecCCCCcc-----hhHHHHHHHHHhhCCCceEEECCHHHHHHHHHhhc
Confidence 235677777777666543 4899999999999998876 799999999998 578999999999999999876
Q ss_pred CCCCCcccCCCc-cccccCCCce-e--eeeecccchhhHHHHhhHHH-HHHHHHHhhc---ccccCCCchHHHHHHHHhh
Q 001963 335 NESWPLKTDDFF-PYADRENAYW-T--GYFTSRPALKGYVRTMSAYY-LAARQLEFFK---GRNEVGLSTDSLADALALV 406 (990)
Q Consensus 335 ~~~~p~~~gDf~-py~~~~~~yW-t--G~yTSr~~~K~~~R~~e~~L-~~ae~l~~l~---~~~~~~~~~~~l~~~l~~~ 406 (990)
...||+++|||+ ||+++ | | |||||||++|+++|++|++| ++||+|++++ +..||...++++|++|+++
T Consensus 295 ~~~lp~~~GEl~~~~~~~----W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~L~~~Wk~ll~~ 370 (923)
T 2wyh_A 295 PENLSTVQGEITSQETDG----WYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEVTSTYPHDQLRYAWKTLMQN 370 (923)
T ss_dssp CSCCCEEESCBSCTTSCS----SSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTT
T ss_pred cccCceecccccCccccc----ceecCCEeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHhcc
Confidence 467999999987 88653 5 5 99999999999999999999 7999999986 4457777899999999999
Q ss_pred hccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccccccCcccccCCCCccccCCCCcEE
Q 001963 407 QHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLV 486 (990)
Q Consensus 407 QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~n~s~~~~~~~~~~~~~~~~ 486 (990)
||||+|||||+++|++||.+||.++.+.++.+++.+++.|+..... .. ...+...
T Consensus 371 Q~HD~i~Gts~~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~---------------------~~----~~~~~~~ 425 (923)
T 2wyh_A 371 HPHDSICGCSVDSVHREMMTRFEKAYEVGHYLAKEAAKQIADAIDT---------------------RD----FPMDSQP 425 (923)
T ss_dssp CBHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC---------------------TT----SCTTSEE
T ss_pred CCCcCcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---------------------cc----CCCCceE
Confidence 9999999999999999999999999999999999999999864310 00 0123567
Q ss_pred EEEEcCCCceeeEEEEEEEc-------------------------CceEEEEcCCCCEEE-EEEeecccccccccccccc
Q 001963 487 VVVYNPLGWKREDIIRIPVI-------------------------NENVTVKDSKGKVIE-SQLLPLLKDSMSLRNSYST 540 (990)
Q Consensus 487 v~vfNpl~~~r~~~V~i~v~-------------------------~~~~~v~d~~g~~v~-~Qi~~~~~~~~~~~~~~~~ 540 (990)
++|||||+|+|+++|+++|. ...+.|+|.+|++|| +|+++... ... ..+.
T Consensus 426 vvvfN~l~~~r~~vV~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~~qi~~~~~-~~~---~~~~ 501 (923)
T 2wyh_A 426 FVLFNTSGHSKTSVAELSLTWKKYHFGQRFPKEVYQEAQEYLARLSQSFQIIDTSGQVRPEAEILGTSI-AFD---YDLP 501 (923)
T ss_dssp EEEEECSSSCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHTCCSEEEEECTTCCBCTTCEEEEEEE-EEE---EECC
T ss_pred EEEEcCCCceEeEEEEEEEEcccccccccccccccchhhhhhcccCCCEEEECCCCCEeccEEEEeccc-ccc---cccc
Confidence 99999999999999999986 368999999999999 99998751 100 0000
Q ss_pred cccCC-CCCCCCcEEEEEEeecCCCceEEEEEEecCcccCccccceeeecccc-CCCceEEcCCeEEEEEeCCCCeEEEE
Q 001963 541 AYLGK-STNVTPSYWLAFSASVPPLGFNTYIISSAKQAASHSGMRTVYKSQIR-QNDTIEVGPGNLKLLYSGKRAKLMRY 618 (990)
Q Consensus 541 ~~~~~-~~~~~~~~~l~f~~~vP~lG~~~y~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~ieN~~~~l~~~~~~G~l~si 618 (990)
..|. .+.....++|.|.++||||||++|.|.......... . . .. ..+..+|||++++|+|| .+|.| ||
T Consensus 502 -~~~~~~~~~~~~~~l~f~a~vP~lG~~~~~i~~~~~~~~~~-~-~-----~~~~~~~~~leN~~~~v~~d-~~G~l-si 571 (923)
T 2wyh_A 502 -KRSFREPYFAIKVRLRLPITLPAMSWKTLALKLGNETTPSE-T-V-----SLYDDSNQCLENGFLKVMIQ-TDGRL-TI 571 (923)
T ss_dssp -SSSCCEEEEEEEEEEEEEEEECTTEEEEEEEEEEC-------C-C-----CSEETTTTEEECSSEEEEEC-TTSCE-EE
T ss_pred -ccccccccceeeEEEEEEEEcCCcceEEEEEEECCCccccc-c-c-----ccccCCCceEecCeEEEEEe-CCCCE-EE
Confidence 0000 000112368999999999999999998754322100 0 0 00 23457899999999999 56998 79
Q ss_pred EecCCCcEEEEEEEEEEee--ccCCCC--------C-------CeeeEEEEe-CCceEEEEEEe----------------
Q 001963 619 INSKTSVNKLLEQSYIYYR--GDDGSK--------D-------LQLSFTILR-GPLLDEVHQRI---------------- 664 (990)
Q Consensus 619 ~dk~~g~~~~~~~~f~~Y~--~~~g~~--------~-------~~~~i~v~~-Gpl~~~v~~~~---------------- 664 (990)
+||++|+++. +|..|. ++.|+. . ....++++. ||++++|++.+
T Consensus 572 ~dk~~gr~~~---~~~~y~d~~d~~day~f~p~~~~~~~~~~~~~~~i~v~~~gpl~~~v~~~~~~~vP~~~~~~L~~~~ 648 (923)
T 2wyh_A 572 TDKQSGLIYQ---DLLRFEDCGDIGNEYISRQPNHDQPFYADQGTIKLNIISNTAQVAELEIQQTFAIPISADKLLQAEM 648 (923)
T ss_dssp EETTTCCEEE---EESEEEEEECCSCSSCCCCCTTCCCEEGGGSEEEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHH
T ss_pred EECCCCeEEE---EEEEEeecCCCCCeeEEEcCCCCceeeccCCCceEEEEEcCCCEEEEEEEEEecCCccchhhhcccc
Confidence 9999999986 677773 222332 1 123566555 99999999886
Q ss_pred -------------cC-----eEEEEEEEecCCCceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeEEEcCCCccceee
Q 001963 665 -------------NP-----WIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIER 726 (990)
Q Consensus 665 -------------~~-----~i~~~vrLy~~~~~ie~e~~V~~i~~~~~~~~e~~~~f~t~I~s~~~fYTDsNG~~~ikR 726 (990)
++ +++|+++||+++++|||++.|++.+ .+|+++++|+|+|.++..+| | ||||+++|
T Consensus 649 ~~~~~~~~r~~~~s~~~~~~~i~q~i~L~~~~~~ie~~~~vd~~~----~~~~l~v~fpt~i~s~~~~~-d-~~fg~i~R 722 (923)
T 2wyh_A 649 EAVIDITERQARRSQEKAELTLTTLIRMEKNNPRLQFTTRFDNQM----TNHRLRVLFPTHLKTDHHLA-D-SIFETVKR 722 (923)
T ss_dssp HTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCSCEEEEEEEEECC----CSEEEEEEEECCCCCSEEEE-E-ETTEEEEE
T ss_pred ccccchhhhhhcccccccceEEEEEEEEeCCCceEEEEEEECCcc----CCEEEEEEeccccCCCCEEE-e-cCceEEEc
Confidence 13 6999999999999999999998763 58999999999999976555 5 99999999
Q ss_pred cccccc-CcccccccccccceEeccceeeEEecCcceEEEeccccccccc-CCCeEEEEEEEEe--eccCCcCccccccc
Q 001963 727 IRDYRK-DWNLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSI-ADGQLELMLHRRL--VADDNRGVSEALNE 802 (990)
Q Consensus 727 ~~~~r~-~w~~~~~~pv~~NyYPv~s~~~I~D~~~~ltvl~Drs~G~sSl-~~G~iElmL~Rr~--~~DD~rGv~e~l~e 802 (990)
+++.++ +|+. ++||||++++|+|+|.+.++||+||+++|++++ .+|+|+|||||++ +.| +|+ +|..|
T Consensus 723 ~~~~~~~~w~~------a~~~~p~~~~v~l~d~~~gvavlnd~~~g~~~~~~~~~i~LtLlRs~~~lg~--~G~-~p~p~ 793 (923)
T 2wyh_A 723 PNHPDATFWKN------PSNPQHQECFVSLFDGENGVTIGNYGLNEYEILPDTNTIAITLLRSVGEMGD--WGY-FPTPE 793 (923)
T ss_dssp ESSCCTTTCCC------SCCCEECSSEEEEECSSEEEEEEESSCCEEEEETTTTEEEEEEEEECSBCCT--TSC-CBCGG
T ss_pred cCCCCCCCccc------ccceEeeeeEEEEECCCCcEEEEeCCccceEEecCCCeEEEEEecccccccc--CCc-ccCch
Confidence 998877 7753 799999999999999999999999999999988 4899999999998 455 787 77766
Q ss_pred cccccccccCeEEeeEEEEEecCccch-hhhcccchhhhccCceeeecccCCCccccccccccccCccccCCCCcceEEE
Q 001963 803 TVCVFDKCEGLTIIGKYYLRIDPVGEA-AKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALIT 881 (990)
Q Consensus 803 ~~~~~~~~~gl~~~~~~~l~l~~~~~~-~~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~nvhllt 881 (990)
.++ .| .+.|.+.+.+.... ....++.+++++.|++++...... ......++.+. .-|++|+|.+
T Consensus 794 a~~-----~G---~h~f~yal~~~~g~~~~~~~~~a~~~~~Pl~~~~~~~~~----~~~~~~~s~l~---~~~~~v~l~a 858 (923)
T 2wyh_A 794 AQC-----LG---KHSLSYSFESITKQTQFASYWRAQEGQVPVITTQTNQHE----GTLAAEYSYLT---GTNDQVALTA 858 (923)
T ss_dssp GGC-----CE---EEEEEEEEEEEETTTHHHHHHHHHHTTSCCEEEECCSCC----CSBCSEEESCB---CCCTTEEEEE
T ss_pred hHh-----ce---EEEEEEEEcccCCchhHHHHHHHHHHhCCHhheecCccc----CcCCcccccee---cCCCCEEEEE
Confidence 542 23 22333333332211 101245788999998876543211 11122334442 2378999999
Q ss_pred eeecCC-CcEEEEEeccccccccCCCcceeeeeccccCCcCccceEEeccccccchhhHhhhcceeeeecCCCCCCCccc
Q 001963 882 LQELDS-GKILLRLAHLYEIEEDTDLSVMSSVELKKVFPKKKISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAV 960 (990)
Q Consensus 882 l~~~~~-~~illRl~~l~~~~~~~~~s~~~~v~l~~lf~~~~~~~i~EtsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~ 960 (990)
||+.++ +.++|||.|..... .+.+.+ .+.+..+.+++|.+.. ..
T Consensus 859 lK~aed~~~~ilRl~n~~g~~-------~~~l~~-----~~~~~~~~~~~llE~~-~~---------------------- 903 (923)
T 2wyh_A 859 FKRRLADNALITRSYNLSNDK-------TCDFSL-----SLPNYNAKVTNLLEKD-SK---------------------- 903 (923)
T ss_dssp EEECTTTCCEEEEEEESCSSC-------CEECCC-----BCTTEEEEEECTTCCB-CS----------------------
T ss_pred EEEccCCCcEEEEEecCCCCc-------ceEEEe-----ccccceEEEeeccCcc-cc----------------------
Confidence 999976 57999987754221 122322 2345578888887531 00
Q ss_pred CCCCCCCCCceEEecCcceeEEEEEEe
Q 001963 961 RGSPVDPAKLVVELAPMEIRTFVIEFY 987 (990)
Q Consensus 961 ~~~~~~~~~~~i~l~PmeIrTf~i~~~ 987 (990)
.+. . ++|.|.||+||+|+++
T Consensus 904 ---~~~---~-~~l~p~ei~T~~l~~~ 923 (923)
T 2wyh_A 904 ---QST---P-SQLGKAEILTLAWKKQ 923 (923)
T ss_dssp ---CCC---C-SEECTTCEEEEEEEEC
T ss_pred ---ccc---c-ceEcCcceEEEEEEeC
Confidence 000 0 6799999999999864
No 3
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=1.4e-115 Score=1090.38 Aligned_cols=799 Identities=16% Similarity=0.172 Sum_probs=579.2
Q ss_pred CCeeEEEEEeCccCCCccchhhhheeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEe-chhHHHHHHhcCCHHHHHH
Q 001963 33 PGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYV-EQAFFQRWWRDQSEEVQNV 111 (990)
Q Consensus 33 ~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~-e~~~~~~w~~~~~p~~~~~ 111 (990)
+.+.+||+|||||||+|||||++||+ .++.++|++|+++|+++|+++|++. ++.++++||++++|+.+++
T Consensus 4 m~~~~v~~v~HsH~D~~Wl~t~~e~~---------~~~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~~~~~ 74 (899)
T 3lvt_A 4 MTKKKVYIVSHSHWDREWYLPYEEHH---------MRLIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPEKKEA 74 (899)
T ss_dssp CCCEEEEEEEEECC----CCCHHHHH---------HHHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHH
T ss_pred cccceEEEECCCCCChHhcCcHHHHH---------HHHHHHHHHHHHHHHhCCCceEEEEcccHHHHHHHHhhCHHHHHH
Confidence 34679999999999999999999997 6899999999999999999999886 5778889999999999999
Q ss_pred HHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchhhHHHHHhhcCCcEEEEe
Q 001963 112 VKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFA 191 (990)
Q Consensus 112 vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~ 191 (990)
||+||++|||| |||||||+||+++|+||+||||++||+|+++ ||++|++||+|||||||+++|||| +++||++++|+
T Consensus 75 vk~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~-~~~Gi~~~~~~ 151 (899)
T 3lvt_A 75 VKKAVQAGKLK-IGPFYILQDDFLISSESNVRNMLIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMM-QLANLPAAAFG 151 (899)
T ss_dssp HHHHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHHHHHHHHHHH-HTCCCCCEEESCCCT---THHHHH-HTTTCCEEEEC
T ss_pred HHHHHHcCCEE-ECchhccccccCCCHHHHHHHHHHHHHHHHH-cCCCCceeEeCCCCCCchHHHHHH-HHcCCCeEEEe
Confidence 99999999999 7999999999999999999999999999999 999999999999999999999999 99999999999
Q ss_pred ecC----HHHHHHh--hhcCceeEEEeeCCCCCCCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCccccCCChHHHH
Q 001963 192 RID----YQDRAKR--INEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERV 265 (990)
Q Consensus 192 Ri~----~~~k~~~--~~~~~~eF~W~g~d~~~~~s~i~t~~~~~~Y~~p~~~f~f~~~~~~~p~~~~~~~~~~nv~~~~ 265 (990)
|++ +...... ...+.++|+|+|+| ||+||||+++++|+.+ .. .| ...+|++.++
T Consensus 152 Rg~~~~~~~~~k~~~~~~~p~~~F~W~g~d----Gs~vlt~~~~~~Y~~g---~~-------~p------~~~~~~~~~~ 211 (899)
T 3lvt_A 152 RGVKPIGFDNQVLESDYSSQYSEMWWEGPD----QTKIFGLLFANWYSNG---NE-------IP------SEKEAAIAFW 211 (899)
T ss_dssp ---------------------CEEEEECTT----SCEEEEEECCCC-------CC-------SC------SSHHHHHHHH
T ss_pred cccccccccccccccccCCCCceEEEECCC----CCeEEEEECCCcCcCc---cC-------CC------CcHHHHHHHH
Confidence 986 3332111 11245799999999 9999999999999854 21 11 1235666666
Q ss_pred HHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHhc-CCCeeEEeCChhhHHHHHHhcC-CCCCcccC
Q 001963 266 NDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQ-DGRVNALYSTPSMYIDAKYAAN-ESWPLKTD 343 (990)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~il~~~G~Df~y~~a~~~~~~~~~li~~~N~-~~~~~i~~sT~~~Yf~a~~~~~-~~~p~~~g 343 (990)
+.+++.++ ..+.++++|+|+|+||. .++++|+++|+++|+ .+.++++|||+++||++++++. ..||+++|
T Consensus 212 ~~~~~~~~---~~~~t~~il~~~G~D~~-----p~~~~l~~~i~~~n~~~p~~~~~~st~~~yf~~l~~~~~~~lp~~~G 283 (899)
T 3lvt_A 212 KQKLADVE---RYASTNHLLMMNGVDHQ-----PVQRDITKAIALANELFPEYEFIHSNFDDYLKAVQEELPEDLGTVTG 283 (899)
T ss_dssp HHHHHHHH---HHCSSSEEEEEEEEC-----------CHHHHHHHHHHHCSSEEEEECCHHHHHHHHHHTCC--CCEEEC
T ss_pred HHHHHHHH---hhcCCCeEEEeecCCCC-----chHHHHHHHHHHHHhcCCCceEEEcCHHHHHHHHHHhccccCCcccc
Confidence 66665443 35789999999999974 335899999999996 4789999999999999999876 78999999
Q ss_pred CCc-cccccCCCcee-eeeecccchhhHHHHhhHHHH-HHHHHHhhc---ccccCCCchHHHHHHHHhhhccccccCccc
Q 001963 344 DFF-PYADRENAYWT-GYFTSRPALKGYVRTMSAYYL-AARQLEFFK---GRNEVGLSTDSLADALALVQHHDAVSGTEK 417 (990)
Q Consensus 344 Df~-py~~~~~~yWt-G~yTSr~~~K~~~R~~e~~L~-~ae~l~~l~---~~~~~~~~~~~l~~~l~~~QhHDaItGTs~ 417 (990)
||+ +|+++ .||+ |||||||++|+++|++|++|+ +||.|++++ +..||...++++|++|+++||||+|||||+
T Consensus 284 El~~~~~~G--~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~l~~~Wk~ll~~Q~HD~i~Gtsi 361 (899)
T 3lvt_A 284 ELTSQETDG--WYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAYEVTGDYPHDQFDYAWKTLLQNHPHDSICGCSV 361 (899)
T ss_dssp CC-------------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCSTTTTTSCSC
T ss_pred cccccccCc--eEEECCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHhccCCCCccCCcCc
Confidence 987 78764 4665 778899999999999999999 699999986 446777789999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccccccCcccccCCCCccccCCCCcEEEEEEcCCCcee
Q 001963 418 QHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPPSEVDLSSGKSLVVVVYNPLGWKR 497 (990)
Q Consensus 418 ~~V~~dy~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~n~s~~~~~~~~~~~~~~~~v~vfNpl~~~r 497 (990)
++|++||.+||.++.+.|+.+++.+++.|+..... |.. ..+...++|||||+|+|
T Consensus 362 ~~V~~d~~~~~~~~~~~~~~l~~~al~~l~~~~~~-------------------~~~------~~~~~~v~vfN~l~~~r 416 (899)
T 3lvt_A 362 DEVHRGMMTRFENANDVGHFLADEATRQLTEAIDT-------------------SVF------PEKAHPFVLFNTSGYQK 416 (899)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCC-------------------TTS------CTTCEEEEEEECSSSCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-------------------ccC------CCCCCEEEEEeCCCcee
Confidence 99999999999999999999999999999864310 000 02457899999999999
Q ss_pred eEEEEEEEcC----------------------ceEEEEcCCCCEEEEEEeeccccccc-ccccccccccCCCCCCCCcEE
Q 001963 498 EDIIRIPVIN----------------------ENVTVKDSKGKVIESQLLPLLKDSMS-LRNSYSTAYLGKSTNVTPSYW 554 (990)
Q Consensus 498 ~~~V~i~v~~----------------------~~~~v~d~~g~~v~~Qi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 554 (990)
+++|++++.. +.+.|.|.+|++||+|+++....... +... ....+.....+.
T Consensus 417 ~~~V~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~G~~v~~qv~~~~~~~~~~l~~~-----~~~~~~~~~~~~ 491 (899)
T 3lvt_A 417 TEVVTVEVEIERLPFYTGKPEDLYHELKQKATPDYQVIDPTGKAVASRIVKEDVRFGYDLPKD-----AFRQPYMAKYLT 491 (899)
T ss_dssp EEEEEEEEEEEEEEGGGSCHHHHHHHHHHSCCCCEEEECSSSCEECCEEEEEEEEEEECCC----------CEEEEEEEE
T ss_pred eeEEEEEEEccccccccccchhhhhhhccccCCceEEECCCCCEEeEEEeecccccccccccc-----ccccccccceEE
Confidence 9999999864 67999999999999999987542110 0000 000001112457
Q ss_pred EEEEe-ecCCCceEEEEEEecCcccCccccceeeeccccCCCceEEcCCeEEEEEeCCCCeEEEEEecCCCcEEEEEEEE
Q 001963 555 LAFSA-SVPPLGFNTYIISSAKQAASHSGMRTVYKSQIRQNDTIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSY 633 (990)
Q Consensus 555 l~f~~-~vP~lG~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ieN~~~~l~~~~~~G~l~si~dk~~g~~~~~~~~f 633 (990)
|.|.+ +||||||++|.|...+...... .+ ....+..+|||++|+|+|| .+|.| +|+||.+|+++. .+
T Consensus 492 l~f~a~~vPalGy~~~~i~~~~~~~~~~---~~----~~~~~~~~leN~~~~v~~d-~~G~l-sl~Dk~~gre~~---~~ 559 (899)
T 3lvt_A 492 VELSVKEMAPFSWDSFALIQGETKAFEG---SL----LAQPATNEMENEFIQVKIE-NNGSL-TIADKKTGETFS---KL 559 (899)
T ss_dssp EEEEEEEECTTEEEEEEEEESCCCCCCS---CC----SEETTTTEEECSSEEEEEC-TTSCE-EEEETTTCCEEE---EE
T ss_pred EEEEecCCCCCCCEEEEEEecCcccccc---cc----cccccCcEEecCcEEEEEc-CCCcE-EEEECCCCeEEE---EE
Confidence 88877 9999999999998765422110 00 0011457899999999999 59999 699999999886 34
Q ss_pred EEe-ecc-CCCC--------C-------CeeeEEE-EeCCceEEEEEEec----------------------------C-
Q 001963 634 IYY-RGD-DGSK--------D-------LQLSFTI-LRGPLLDEVHQRIN----------------------------P- 666 (990)
Q Consensus 634 ~~Y-~~~-~g~~--------~-------~~~~i~v-~~Gpl~~~v~~~~~----------------------------~- 666 (990)
..| +++ .|+. + ....+++ ++||++++|++.+. +
T Consensus 560 ~~~~d~gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~ 639 (899)
T 3lvt_A 560 LTFEDTGDIGNEYIFFKPTEDQGITTENVTAEITNKENSPVKASYQIKQTVMLPVAADERLEEEQKAVREFRERLAQRST 639 (899)
T ss_dssp TEEEEEECCSBTTBCCCCTTCCCEESTTCCCEEEEEEECSSEEEEEEEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCS
T ss_pred EEEecCCCCCCceeecCCcCCceeeccCCCceEEEEEcCCCEEEEEEEEEEccccchhhhhcccccccccchhhhhcccc
Confidence 444 332 2321 1 1245665 58999999986642 3
Q ss_pred -----eEEEEEEEecCCCceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeEEEcCCCccceeeccccccCcccccccc
Q 001963 667 -----WIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDWNLEVNQP 741 (990)
Q Consensus 667 -----~i~~~vrLy~~~~~ie~e~~V~~i~~~~~~~~e~~~~f~t~I~s~~~fYTDsNG~~~ikR~~~~r~~w~~~~~~p 741 (990)
+++|+|+||+++++|||+++|++. +.+|+|++.|+++|.+...+| .++||+++|+++.+++|+
T Consensus 640 ~~~~~~i~q~i~L~~~~~~id~~~~Vdw~----~~~~~Lrv~Fp~~i~s~~~~~--d~~fG~i~Rpt~~~t~We------ 707 (899)
T 3lvt_A 640 TLRPFEITTMVTMIKESNQLFFETTINNQ----IKDHRLRVLFPTGMVTETHEA--DSIYEVVTRPNQVSDTWE------ 707 (899)
T ss_dssp CEEEEEEEEEEEEETTCCCEEEEEEEEEC----CCSEEEEEEECCSCCCSEEEE--ECSSSEEEEEC-------------
T ss_pred cccceEEEEEEEEeCCCCEEEEEEEECCC----cCCEEEEEECCCCCCcCceEE--eccceEEECCCCCCcccc------
Confidence 799999999999999999999764 568999999999999988888 489999999999888996
Q ss_pred cccceEeccceeeEEecCcceEEEecccccccccCCCeEEEEEEEEeeccCCcCccccccccccccccccCeEEeeEEEE
Q 001963 742 IAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLTIIGKYYL 821 (990)
Q Consensus 742 v~~NyYPv~s~~~I~D~~~~ltvl~Drs~G~sSl~~G~iElmL~Rr~~~DD~rGv~e~l~e~~~~~~~~~gl~~~~~~~l 821 (990)
.++|+||+.+||+|.|.+.+++|+||+++|++++.+|+|+|||+|+...-=.+|+- |--|. +|.| .++|.+
T Consensus 708 ~a~~e~~~~~~vdlsd~~~Gvavlnd~~~gy~v~~d~~i~LTLlRs~g~lG~~g~~-p~Pda-----~~~G---~h~F~y 778 (899)
T 3lvt_A 708 NPTNPQHQQAFVNVHDQNKGVTIFNEGLNEYEVLADGTIAVTLIRCVGELGDWGYF-ATPEA-----QCQG---EYTFKY 778 (899)
T ss_dssp CCCCCEECSSEEEEECSSCEEEEEESSCCEEEECTTCCEEEEEEEECSBCCTTSCC-BCGGG-----GCCE---EEEEEE
T ss_pred CCCcceeeeeEEEEecCCceEEEEeCCCcceeEcCCCEEEEEEecccCcccccCCc-CCcch-----hhhC---ceEEEE
Confidence 36889999999999999999999999999998877899999999997311112311 11111 2334 334555
Q ss_pred EecCccc---hhhhcccchhhhccCceeeecccCCCccccccccccccCccccCCCCcceEEEeeecCC-CcEEEEEecc
Q 001963 822 RIDPVGE---AAKWRRSFGQEIYSPFLLAFTEQDGDHWANSHLATYSAMDTTYVLPDNVALITLQELDS-GKILLRLAHL 897 (990)
Q Consensus 822 ~l~~~~~---~~~~~r~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lp~nvhlltl~~~~~-~~illRl~~l 897 (990)
.|-+... .+.. -+.+.+++.|+..+-..... ......+|.+. .-+++|.+-++|..++ +.++||+
T Consensus 779 al~ph~g~~~~~~~-~~~a~~~n~pl~~~~~~~~~----~~l~~~~s~~~---~~~~~v~lsavK~aEd~~~~IlRl--- 847 (899)
T 3lvt_A 779 GLSLHGKPEERFAT-YQQAYSAQIPFTAATTARHE----GKLAPNHVYLT---TAEGPIGWTAVKRQEQTNHLVVRG--- 847 (899)
T ss_dssp EEEEESSGGGHHHH-HHHHHHHTSCCEEEECCSCC----CSBCSEEESEE---CCCSSEEEEEEEECTTTCCEEEEE---
T ss_pred EEEecCCCchhhHH-HHHHHHhcCCcceeeccccc----CcCCCccccee---eCCCCEEEEEEEeeecCCcEEEEE---
Confidence 4443221 2212 23578899998754322111 11111233321 2356999999999875 4699995
Q ss_pred ccccccCCCcceeeeeccccCCcCc-cceEEeccccccchhhHhhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecC
Q 001963 898 YEIEEDTDLSVMSSVELKKVFPKKK-ISKVTEMNLSANQERAVMEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAP 976 (990)
Q Consensus 898 ~~~~~~~~~s~~~~v~l~~lf~~~~-~~~i~EtsLt~~~~~~~~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~P 976 (990)
|+.... .+++.+. +. +..+.||+|-... + .+ ...+.+.|.|
T Consensus 848 ye~~g~-----~~~l~~~-----~~~~~~~~~~nllE~~---------~----~~---------------~~~~~~~~~p 889 (899)
T 3lvt_A 848 FNLTAQ-----NIPCELH-----KETQPATCLTNVLEEP---------L----TP---------------AIEVDAPLRP 889 (899)
T ss_dssp EECSSS-----CBCCCCE-----ETTEECCEEECTTSCB---------C----SS---------------CCCTTSCBCT
T ss_pred EcCCCC-----cEEEEEc-----cCcccceEEecccccc---------c----cC---------------CcceeeeEcC
Confidence 553211 1122221 12 3557788877531 0 00 0023467999
Q ss_pred cceeEEEEE
Q 001963 977 MEIRTFVIE 985 (990)
Q Consensus 977 meIrTf~i~ 985 (990)
.||+||+|+
T Consensus 890 feI~T~~~~ 898 (899)
T 3lvt_A 890 FEIRTWRFE 898 (899)
T ss_dssp TCEEEEEEC
T ss_pred ceEEEEEEe
Confidence 999999983
No 4
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=100.00 E-value=1e-76 Score=644.57 Aligned_cols=294 Identities=49% Similarity=0.869 Sum_probs=279.2
Q ss_pred eeecCCCCCCCCeeEEEEEeCccCCCccchhhhheeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHh
Q 001963 23 MMYNTSAGIVPGKINVHLVPHSHDDVGWLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWR 102 (990)
Q Consensus 23 ~~~~~~~~~~~~~~~V~lvpHSH~D~gWl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~w~~ 102 (990)
++|++|+..++++++||+|||||+|+||+||+++||+++++.|+.++++++|++|+++|+++|++||+|+|++++++||+
T Consensus 1 ~~~~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~e~~~~~~~~i~~~~~~~~~~~vl~~l~~~p~~~F~~~e~~~~~~w~~ 80 (298)
T 1o7d_A 1 AGYKTCPKVKPDMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLANPTRRFIYVEIAFFSRWWR 80 (298)
T ss_dssp -CCTTCCCCCSSSEEEEEEEBCBCCSSSSSCHHHHHHTCCTTTCCCCHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHH
T ss_pred CCCcCCCCCCCCceEEEEeCCCCCcccccccHHHhhccccchhHHHHHHHHHHHHHHHHHHCCCCeEEEecchHhHHHHH
Confidence 35999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCC--CcceeecCCCCCchhhHHHHH
Q 001963 103 DQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVT--PRIGWQIDPFGHSAVQAYLLS 180 (990)
Q Consensus 103 ~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~~fG~~--p~v~w~~D~FGhs~~~p~ll~ 180 (990)
+++|+.+++||+||++||||||||||||+|||++|+||+||||++|++|++++||+. |++||+|||||||+++|+||
T Consensus 81 ~~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s~~lP~il- 159 (298)
T 1o7d_A 81 QQTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQASLF- 159 (298)
T ss_dssp TSCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCCHHHHHHH-
T ss_pred hcCHHHHHHHHHHHHCCCEEEECceeeccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCceeEeCCCCCccHHHHHHH-
Confidence 999999999999999999999999999999999999999999999999999999997 99999999999999999999
Q ss_pred hhcCCcEEEEeecCHHHHHHhhhcCceeEEEeeCCCCC-CCCceeEeeCCCCCCCCCCCCccccCCCCCCccCCccccCC
Q 001963 181 AEVGFDFLFFARIDYQDRAKRINEKTLEVVWRASKSLG-SSAQIMTGISPKNYEPPSDNFYFEVGDTSPIVQDDMNLFDY 259 (990)
Q Consensus 181 ~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~-~~s~i~t~~~~~~Y~~p~~~f~f~~~~~~~p~~~~~~~~~~ 259 (990)
+++||++++++|++|++++.+...+.+||+|+|+++++ +|++||||++|.+|++| .|||||..|.++|+.++|.++++
T Consensus 160 ~~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dgs~i~t~~~~~~Y~~~-~g~~fd~~~~~~p~~~~~~~~~~ 238 (298)
T 1o7d_A 160 AQMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPTADLFTSVLPNMYNPP-EGLCWDMLCADKPVVEDTRSPEY 238 (298)
T ss_dssp HHHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTTTEEEEEECSSTTSCC-TTCCCSTTCCCCCCCCCTTSTTC
T ss_pred HHcCCCeEEEEecccccccccccCCCceEEEECCCCCCCCCCeEEEEEeCCCCCCC-CCcccccccCCcCccCCccchHH
Confidence 99999999999999999988777788999999997666 69999999999999998 89999999988888888888999
Q ss_pred ChHHHHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHhcCCCee
Q 001963 260 NVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVN 318 (990)
Q Consensus 260 nv~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~y~~a~~~~~~~~~li~~~N~~~~~~ 318 (990)
|+++|++.|+++++++++.|+|++||+|+|+||+|.+|..||.||++||+++|++..++
T Consensus 239 nv~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~a~~~f~n~~~li~~iN~~~~~~ 297 (298)
T 1o7d_A 239 NAKELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQRAN 297 (298)
T ss_dssp CHHHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTTHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcEEeccCCCCCccchhHHHHHHHHHHHHHhhcCccC
Confidence 99999999999999999999999999999999999999999999999999999876554
No 5
>1o7d_D Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=100.00 E-value=7.1e-60 Score=501.24 Aligned_cols=251 Identities=37% Similarity=0.649 Sum_probs=231.3
Q ss_pred ceEEcCCeEEEEEeCCCCeEEEEEecCCCcEEEEEEEEEEeeccCC---------CC------------CCeeeEEEEeC
Q 001963 596 TIEVGPGNLKLLYSGKRAKLMRYINSKTSVNKLLEQSYIYYRGDDG---------SK------------DLQLSFTILRG 654 (990)
Q Consensus 596 ~~~ieN~~~~l~~~~~~G~l~si~dk~~g~~~~~~~~f~~Y~~~~g---------~~------------~~~~~i~v~~G 654 (990)
.+.|+|++++++||+.+|+|++|+++++|.++.+.++|.+|.+..| .+ ..++.+.+++|
T Consensus 2 ~~~i~n~~~~l~fd~~tG~L~si~~~~~g~~~~v~q~f~~Y~s~~g~~~~~~~SGAYiFrP~g~~~~~~~~~~~~~v~~G 81 (282)
T 1o7d_D 2 DLVIQNEYLRARFDPNTGLLMELENLEQNLLLPVRQAFYWYNASTGNNLSSQASGAYIFRPNQNKPLFVSHWAQTHLVKA 81 (282)
T ss_dssp CCEEECSSEEEEECTTTCSEEEEEEC---CEEECEEEEEEEEBCCCBTTBSCCCCSSCCCBSSSSCEESCSCCEEEEEEC
T ss_pred cEEEcCceEEEEECCCCCcEEEEEEcCCCeEEEEeEEEEEEecccCCCCCCCCCceEEecCCCCCCcccCCCcEEEEEEC
Confidence 3689999999999988899999999999999999999999987632 22 11245779999
Q ss_pred CceEEEEEEecCeEEEEEEEecCCCceEEEEEeCcccccCCCCcEEEEEEEeeccCCCeEEEcCCCccceeeccccccCc
Q 001963 655 PLLDEVHQRINPWIYQVTRVYKGKDHAEIEFTVGPIPIDDGIGKEVVTQITSNMISNKTFYTDSSGRDFIERIRDYRKDW 734 (990)
Q Consensus 655 pl~~~v~~~~~~~i~~~vrLy~~~~~ie~e~~V~~i~~~~~~~~e~~~~f~t~I~s~~~fYTDsNG~~~ikR~~~~r~~w 734 (990)
|++++|++.+++|++|++|||++..+||++|+|+|||++++.|||+++||.|+|+|+++||||+||+||+||++++|++|
T Consensus 82 ~lv~eV~~~~~~~~sq~~Rly~~~~~vE~e~~Vgpipi~d~~~kEiv~r~~T~i~s~~~FYTDsNG~e~~kR~~~~r~~~ 161 (282)
T 1o7d_D 82 SLVQEVHQNFSAWCSQVVRLYPRQRHLELEWTVGPIPVGDGWGKEVISRFDTALATRGLFYTDSNGREILERRRNYRPTW 161 (282)
T ss_dssp SSCEEEEEEEETTEEEEEEECTTCSSEEEEEEECCCCCTTSCCEEEEEEEECCCCCTTEEEEESTTSSEEEEETTCCSSS
T ss_pred CEEEEEEEEECCcEEEEEEEecCCceEEEEEEEccccccCCCCcEEEEEEEeeeccCCeEEECCCCceeeEEEecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccceEeccceeeEEecCcceEEEecccccccccCCCeEEEEEEEEeeccCCcCccccccccccccccccCeE
Q 001963 735 NLEVNQPIAGNYYPVNLGIYMKDNSSELSILVDRSVGGSSIADGQLELMLHRRLVADDNRGVSEALNETVCVFDKCEGLT 814 (990)
Q Consensus 735 ~~~~~~pv~~NyYPv~s~~~I~D~~~~ltvl~Drs~G~sSl~~G~iElmL~Rr~~~DD~rGv~e~l~e~~~~~~~~~gl~ 814 (990)
+...++|++||||||+++|||+|++.||||++|||+||||+++|+||||||||+++||+|||||||+|++ +|++
T Consensus 162 ~~~~~~pv~gNYYPv~s~~~IqD~~~rltvl~drs~G~sSl~~G~lElMlhRRl~~DD~rGvge~l~d~~------~gl~ 235 (282)
T 1o7d_D 162 KLNQTEPVAGNYYPVNSRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRLLKDDARGVGEPLNKEG------SGLW 235 (282)
T ss_dssp CCCCSCTTGGGCEEESSEEEEECSSEEEEEEESSCEEECCSSTTEEEEEEEEECSSCCSSSCCSCSCCCG------GGGS
T ss_pred ccccccCcccceeeeeeEEEEEcCCeEEEEEecccccccccCCCeEEEEEeeeccccccccccccccccC------CCeE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999982 6899
Q ss_pred EeeEEEEEecCccchhhhcccchhhhccCceeeecccC
Q 001963 815 IIGKYYLRIDPVGEAAKWRRSFGQEIYSPFLLAFTEQD 852 (990)
Q Consensus 815 ~~~~~~l~l~~~~~~~~~~r~~~~~l~~p~~~~~~~~~ 852 (990)
++|+|||+|++...++..+|.+++++++||+++|+..+
T Consensus 236 v~g~~~l~l~~~~~~~~~~r~~~~~~~~p~~~~fs~~~ 273 (282)
T 1o7d_D 236 VRGRHLVLLDKKETAAARHRLQAEMEVLAPQVVLAQGG 273 (282)
T ss_dssp EEEEEEEEEEEHHHHHHHHHHHHHHHHSCCEEEEEEC-
T ss_pred EEEEEEEEEeCcccchhhhhHHHHhhhCchhhheecCC
Confidence 99999999999888877888899999999999998754
No 6
>1o7d_C Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 b.30.5.6
Probab=99.97 E-value=2.6e-30 Score=257.34 Aligned_cols=150 Identities=41% Similarity=0.697 Sum_probs=133.1
Q ss_pred chHHHHHHHHhhhccccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCcccccccCcccccCCC
Q 001963 395 STDSLADALALVQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAASLACLTEFSKNGCVNPITNFQQCPLLNISYCPP 474 (990)
Q Consensus 395 ~~~~l~~~l~~~QhHDaItGTs~~~V~~dy~~rl~~a~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~n~s~~~~ 474 (990)
.++++|++|+++||||+||||++++|++||.+||.+|++.++.+++.+++.|+... .+|..|.++|++.||.
T Consensus 2 ~L~~~~k~l~~~QhHDaItGts~~~V~~Dy~~rl~~~~~~~~~l~~~~l~~L~~~~--------~~~~~~~~ln~~~~~~ 73 (159)
T 1o7d_C 2 DSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLSEGWRPCEVLMSNALAHLSGLK--------EDFAFCRKLNISICPL 73 (159)
T ss_dssp CSHHHHHHHHHTTBTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------SCEECCTTGGGTCCHH
T ss_pred hHHHHHHHHhCcccCCcCCccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------cccccccccccccCcc
Confidence 47889999999999999999999999999999999999999999999999998532 2677899999999987
Q ss_pred CccccCCCCcEEEEEEcCCCceeeEEEEEEEcCceEEEEcCCCCEEEEEEeecccccccccccccccccCCCCCCCCcEE
Q 001963 475 SEVDLSSGKSLVVVVYNPLGWKREDIIRIPVINENVTVKDSKGKVIESQLLPLLKDSMSLRNSYSTAYLGKSTNVTPSYW 554 (990)
Q Consensus 475 ~~~~~~~~~~~~v~vfNpl~~~r~~~V~i~v~~~~~~v~d~~g~~v~~Qi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (990)
++. ++...|+|||||+|+|+++|+++|+.+.+.|+|.+|++|++|+++.+.. ..++
T Consensus 74 ~~~----~~~~~vvvfN~l~~~r~~~V~v~v~~~~~~v~d~~G~~v~~qi~~~~~~--------------------~~~~ 129 (159)
T 1o7d_C 74 TQT----AERFQVIVYNPLGRKVDWMVRLPVSKHVYLVKDPGGKIVPSDVVTIPSS--------------------DSQE 129 (159)
T ss_dssp HHH----CSEEEEEEEECSSSCEEEEEEEEECSSCEEEECSSSCEECCEEEEETTT--------------------TEEE
T ss_pred ccC----CccEEEEEECCCCceEeEEEEEEEcCCcEEEEcCCCCEeeeEEEeccCC--------------------CceE
Confidence 541 4567899999999999999999999999999999999999999987642 2357
Q ss_pred EEEEeecCCCceEEEEEEecCc
Q 001963 555 LAFSASVPPLGFNTYIISSAKQ 576 (990)
Q Consensus 555 l~f~~~vP~lG~~~y~i~~~~~ 576 (990)
|+|.++||||||++|+|...+.
T Consensus 130 l~f~a~vP~lG~~ty~i~~~~~ 151 (159)
T 1o7d_C 130 LLFSALVPAVGFSIYSVSQMPN 151 (159)
T ss_dssp EEEEEEECTTEEEEEEEEECC-
T ss_pred EEEEeecCCceeEEEEEEECCC
Confidence 9999999999999999987654
No 7
>1o7d_E Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: b.30.5.6
Probab=99.94 E-value=1.1e-26 Score=217.60 Aligned_cols=119 Identities=34% Similarity=0.554 Sum_probs=98.3
Q ss_pred cccccCccccCCCCcceEEEeeecCCCcEEEEEeccccccccC--CCcceeeeeccccCCcCccceEEeccccccchhhH
Q 001963 862 ATYSAMDTTYVLPDNVALITLQELDSGKILLRLAHLYEIEEDT--DLSVMSSVELKKVFPKKKISKVTEMNLSANQERAV 939 (990)
Q Consensus 862 ~~~~~l~~~~~lp~nvhlltl~~~~~~~illRl~~l~~~~~~~--~~s~~~~v~l~~lf~~~~~~~i~EtsLt~~~~~~~ 939 (990)
.+|+++.. +||+||||+||++|+++++||||+|+|++++|+ .+|+|++|||++||..++|.+|+||||+||+++++
T Consensus 3 ~~~s~l~~--~LP~nvhLlTLe~~~~~~iLlRl~hl~e~~ed~~~~~s~pv~v~l~~lF~~~~i~~i~EttLtgn~~~~~ 80 (126)
T 1o7d_E 3 TQFSGLRR--ELPPSVRLLTLARWGPETLLLRLEHQFAVGEDSGRNLSSPVTLDLTNLFSAFTITNLRETTLAANQLLAY 80 (126)
T ss_dssp CEECSBSS--CCCTTCEEEEEEEEETTEEEEEEECCCCTTTTTTTTCSSCEEEECSSSBSSSEEEEEEEECTTSSSBGGG
T ss_pred cccCcccc--cCCCcEeEEEEEEcCCCcEEEEEEeecccccCcccccCcceEEeHHHhhcccccceEEEEcccccccccc
Confidence 35777764 899999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred hhhcceeeeecCCCCCCCcccCCCCCCCCCceEEecCcceeEEEEEEeec
Q 001963 940 MEKKRLVWRVEGSSKEQPTAVRGSPVDPAKLVVELAPMEIRTFVIEFYSE 989 (990)
Q Consensus 940 ~~~~r~~w~~~~~~~~~~~~~~~~~~~~~~~~i~l~PmeIrTf~i~~~~~ 989 (990)
+ +||+|++++..... + .+++.+.+.|+|.|||||||+|+++.+
T Consensus 81 ~--~Rl~w~~~~~~~~~----~-~~~~~~~~~vtL~PmEIRTFii~~~~~ 123 (126)
T 1o7d_E 81 A--SRLQWTTDTGPTPH----P-SPSRPVSATITLQPMEIRTFLASVQWE 123 (126)
T ss_dssp C--CCCCCCBC-------------------CEEEECTTCEEEEEEEEEC-
T ss_pred c--cccccccCCCCccc----c-cccCCCCceEEEcCccEEEEEEEEEec
Confidence 7 99999988744321 1 444556789999999999999999864
No 8
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=99.88 E-value=1.8e-23 Score=178.83 Aligned_cols=74 Identities=53% Similarity=0.894 Sum_probs=70.9
Q ss_pred CeeEEeCChhhHHHHHHhcCCCCCcccCCCccccccCCCceeeeeecccchhhHHHHhhHHHHHHHHHHhhccc
Q 001963 316 RVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWTGYFTSRPALKGYVRTMSAYYLAARQLEFFKGR 389 (990)
Q Consensus 316 ~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDf~py~~~~~~yWtG~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~ 389 (990)
+++++||||+|||+++++.+..||+++||||||++++++||||||||||.+|+++|++++.|++||+|.++++.
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L~~la~~ 75 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKANLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQLEALAGP 75 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTCCCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred eEEEEeCCHHHHHHHHHHhCCCCcccCCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 48999999999999999988899999999999999999999999999999999999999999999999998753
No 9
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=99.79 E-value=1e-17 Score=200.70 Aligned_cols=144 Identities=16% Similarity=0.238 Sum_probs=131.5
Q ss_pred eeEEEEEeCccCCCc-cchhhhheeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHHHHHHHH
Q 001963 35 KINVHLVPHSHDDVG-WLKTVDQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEEVQNVVK 113 (990)
Q Consensus 35 ~~~V~lvpHSH~D~g-Wl~t~~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~w~~~~~p~~~~~vk 113 (990)
+..|.+|.|+|.|.+ |.|.+++ .+.+.+..+++.|+++|++||...-...+..|+++.+|+..+++|
T Consensus 3 ~~~l~lv~H~HqP~~~~~~~~e~------------a~~~~Y~pll~ll~~~~~~k~~~~~s~~ll~~l~~~~p~l~~~ik 70 (659)
T 1k1x_A 3 RINFIFGIHNHQPLGNFGWVFEE------------AYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEENKPDYLDLLR 70 (659)
T ss_dssp CEEEEEEEEECCCTTCCHHHHHH------------HHHHTHHHHHHHHTTCTTCCEEEEECHHHHHHHHHHCHHHHHHHH
T ss_pred ceEEEEEEEccCCCccCcHHHHH------------HHHHHHHHHHHHHHhCCCcEEEEEccHHHHHHHHHHCHHHHHHHH
Confidence 478999999999999 5555553 356788889999999999999876667777899999999999999
Q ss_pred HHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCchhhHHHHHhhcCCcEEEEeec
Q 001963 114 QLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFARI 193 (990)
Q Consensus 114 ~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~Ri 193 (990)
+++++||+|++||+|+.++..+++.|++++|+..|.++++ .||++|+..|.||. |+++.+|++| +++||+++++.-.
T Consensus 71 ~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL-~~~Gi~y~~td~~ 147 (659)
T 1k1x_A 71 SLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYAR-KLGYDAKGVWLTER-VWQPELVKSL-REAGIEYVVVDDY 147 (659)
T ss_dssp HHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHHHHHHHH-HTTCCCCEEECGGG-CBCTTHHHHH-HHTTCCEEEEEHH
T ss_pred HHHHCCCEEEEccCcccccccCCCHHHHHHHHHHHHHHHH-HcCCCCCEEECccc-ccChhHHHHH-HHcCCcEEEECch
Confidence 9999999999999999999999999999999999999999 99999999999999 5999999999 9999999999854
No 10
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=98.74 E-value=6.6e-08 Score=111.02 Aligned_cols=285 Identities=14% Similarity=0.098 Sum_probs=165.6
Q ss_pred HHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCC-CHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCch----
Q 001963 99 RWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAP-HYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSA---- 173 (990)
Q Consensus 99 ~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~-~~es~i~ql~~G~~~l~~~fG~~p~v~w~~D~FGhs~---- 173 (990)
+-|+...++.-+.+|+|++.|++||+++++.-+--.+. ..|++..|+..|.+.+++.||.+|+..|.|.. |++.
T Consensus 135 ~~~~~~~~dii~~fr~L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~ 213 (540)
T 3p0b_A 135 DHFQRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPW 213 (540)
T ss_dssp HHHHHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEE
T ss_pred HHHHHhhHHHHHHHHHHHHCCCEEEEcCCchhhHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECccc-ceeCcccc
Confidence 34455688999999999999999999999999988888 58999999999999999999999999999998 9998
Q ss_pred -------------hhHHHHHhhcCCcEEEEeecCHHHHHHhhhcCceeE---EEeeCCC---------CCCCCceeEee-
Q 001963 174 -------------VQAYLLSAEVGFDFLFFARIDYQDRAKRINEKTLEV---VWRASKS---------LGSSAQIMTGI- 227 (990)
Q Consensus 174 -------------~~p~ll~~~~G~~~~~~~Ri~~~~k~~~~~~~~~eF---~W~g~d~---------~~~~s~i~t~~- 227 (990)
.+..+| +++||+++++.--.... ....-.+ ...+..+ .++|-.||.--
T Consensus 214 ~~~~~~~~~~~~~~l~~~L-~~~Gi~y~~vd~~~~~~-----~~~~p~yG~~~~~p~~~~~~py~v~~~~~~i~vf~RD~ 287 (540)
T 3p0b_A 214 KPPVEGPPEGVRPGVDELL-MRAGIRYTFVDAHLVQG-----GEPLSPYGEAALGPVESQEATYHVHELESGLRVLARNP 287 (540)
T ss_dssp CCSSSCSCCEEECCHHHHH-HHTTCCEEEECTHHHHC-----SSCCCC--------CCCCGGGGSEEECTTSCEEEEBCH
T ss_pred ccccccccccchhhHHHHH-HHcCCeEEEECchhhcc-----CCCCCCCCccccccccccccceeeccCCCceEEEeCCH
Confidence 999999 89999999975321100 0000000 1111110 01132333210
Q ss_pred --------CCCCCCCCC-----------CCCccccCC-CCCCccCCccccCCC-------hHHHHHHHHHHHHHHhhhcC
Q 001963 228 --------SPKNYEPPS-----------DNFYFEVGD-TSPIVQDDMNLFDYN-------VPERVNDFVSAAIAQANITR 280 (990)
Q Consensus 228 --------~~~~Y~~p~-----------~~f~f~~~~-~~~p~~~~~~~~~~n-------v~~~~~~~~~~~~~~~~~~~ 280 (990)
...+|-.-+ .||.|-+.. ...|.. .-..|+ +++-|+.|+..++++.....
T Consensus 288 ~lS~~VWS~~~GYPGd~~YReF~rd~~~tGfky~rit~~~~~l~---~K~pYdp~~A~~~~~~hA~~Fv~~l~~~~~~~~ 364 (540)
T 3p0b_A 288 ETTLQVWSADYGYPGEGLYREFHRKDPLSGLHHWRVTHRKADLA---EKAPYDPEAAFAKTEEHARHFVGLLERLAGRHP 364 (540)
T ss_dssp HHHHHHHCTTTSGGGSTTSBCSSCCCTTTCCCCBBCCSTTCCGG---GCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred HHHhhccccccCCCCChhHhhhccccccccceeeccCCccCCcc---ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 001221100 133322211 000000 012234 33347889988877655555
Q ss_pred CCeEEEeecC---CCCCcchHHHHHHHHHHHHHHhcCCCeeEEeCChhhHHHHHHhcCCCCCcccCCCccccccCCCcee
Q 001963 281 TNHIMWTMGT---DFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAANESWPLKTDDFFPYADRENAYWT 357 (990)
Q Consensus 281 ~~~il~~~G~---Df~y~~a~~~~~~~~~li~~~N~~~~~~i~~sT~~~Yf~a~~~~~~~~p~~~gDf~py~~~~~~yWt 357 (990)
.+.|.+++-. .+.+..+. .-++.+++.+.+ ...+++.||++|++....... ++ .+-+- ..+.+..|.
T Consensus 365 ~~lvv~~~D~ElfGHww~eG~---~fL~~l~r~l~~--~~~i~~~T~se~L~~~~~~~~-~~--~sSWg--~~g~~~~Wl 434 (540)
T 3p0b_A 365 EGVILSPYDAELFGHWWYEGV---AWLEAVLRLLAQ--NPKVRPVTAREAVQGPAVRTA-LP--EGSWG--RGGDHRVWL 434 (540)
T ss_dssp TCEEEEEEEGGGBTTTBTTHH---HHHHHHHHHHTT--CSSEEECCHHHHTCSCEEECC-CC--SBCSS--GGGSSTTTS
T ss_pred CCEEEEEechhhcccCccHHH---HHHHHHHHHHhh--cCCeEEECHHHHHHhCCCCCC-CC--CCCCC--CCCCcCccC
Confidence 5777777632 13444454 345566666532 357899999999875332222 11 11111 023456777
Q ss_pred eeeecccchhhHHHHhhHHHHHHHHHHhhccc-ccCCCchHHHHHHHHhhhcccc
Q 001963 358 GYFTSRPALKGYVRTMSAYYLAARQLEFFKGR-NEVGLSTDSLADALALVQHHDA 411 (990)
Q Consensus 358 G~yTSr~~~K~~~R~~e~~L~~ae~l~~l~~~-~~~~~~~~~l~~~l~~~QhHDa 411 (990)
|--.. .+ -...-++.+.+..++.. ......++.+++.|++.|--|-
T Consensus 435 g~~~~-----w~---~~~l~~a~~~m~~~~~~~~~~~r~l~Qa~RELLlAesSDW 481 (540)
T 3p0b_A 435 NEKTL-----DY---WEKVYRAEGAMREAARRGVLPEGVLRQAMRELLLLEASDW 481 (540)
T ss_dssp SGGGH-----HH---HHHHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHTBTHH
T ss_pred CCHHH-----HH---HHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHhCcc
Confidence 73322 11 11122222333333210 1112357889999999999996
No 11
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=98.71 E-value=7.1e-08 Score=111.29 Aligned_cols=91 Identities=15% Similarity=0.286 Sum_probs=84.0
Q ss_pred HHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCC-HHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCCch----
Q 001963 99 RWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPH-YIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSA---- 173 (990)
Q Consensus 99 ~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~-~es~i~ql~~G~~~l~~~fG~~p~v~w~~D~FGhs~---- 173 (990)
+-|.+..++.-..+|+|++.|++||++++|.-+--.+.. .|++..|+..|.+.+++.||.+|+..|.|.. +++.
T Consensus 114 ~~~~~~~~dii~~fr~L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~ 192 (562)
T 3n98_A 114 DYWKAINGDIIGKLRELQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFGMKPKGIWLPEC-AYRPAGEW 192 (562)
T ss_dssp HHHHHTTTCHHHHHHHHHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCSBEECGGG-CBCCSEEE
T ss_pred HHHHHhhhHHHHHHHHHHHCCCEEEEcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCCCCCEEECccc-ceeCcccc
Confidence 345566889999999999999999999999999888775 8999999999999999999999999999999 9998
Q ss_pred -----------hhHHHHHhhcCCcEEEEe
Q 001963 174 -----------VQAYLLSAEVGFDFLFFA 191 (990)
Q Consensus 174 -----------~~p~ll~~~~G~~~~~~~ 191 (990)
.+..+| +++||+++++.
T Consensus 193 ~~~~~~~~~~~~i~~~L-~~~Gi~y~~vd 220 (562)
T 3n98_A 193 ELPGGRKVKRQGIEKFL-EEFGLRYFFVE 220 (562)
T ss_dssp ECGGGCEEEECCHHHHH-HTTTCCEEEEC
T ss_pred ccccccccchhhHHHHH-HHcCCeEEEEC
Confidence 999999 89999999975
No 12
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=98.66 E-value=3.4e-06 Score=98.57 Aligned_cols=151 Identities=12% Similarity=0.135 Sum_probs=109.7
Q ss_pred eEEEEEeCccCCCccchhh-hheeeccCccchhhhHHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhc-----------
Q 001963 36 INVHLVPHSHDDVGWLKTV-DQYYVGSNNSIQVACVQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRD----------- 103 (990)
Q Consensus 36 ~~V~lvpHSH~D~gWl~t~-~ey~~~~~~~i~~~~v~~il~~vi~~L~~~p~~kF~~~e~~~~~~w~~~----------- 103 (990)
..|-+|=|.|.=. ...+- ++|+ +...........+--++..|++.|++|++.+=...+.+++++
T Consensus 3 ~~l~lvlH~HqP~-~~~~~~~~~~---~e~W~~~~~~~~Y~pll~~l~~~~~~k~t~~lSP~LleqL~d~~l~~r~~~~l 78 (528)
T 2b5d_X 3 GKILIFLHAHLPY-VHHPEYDHFL---EERWLFEAITETYIPLLMMFDEIEDFRLTMSITPPLMEMLSSRDLQEKYERHM 78 (528)
T ss_dssp EEEEEEEEECCCC-CCCTTCSSCT---THHHHHHHHHHTHHHHHHHHHHSSCCCEEEEECHHHHHHHHCHHHHHHHHHHH
T ss_pred eeEEEEEECCCCC-ccCCCCCCcC---cChHHHHHHHHHHHHHHHHHHhCcCccEEEEECHHHHHHHhChhhhhhHHHHH
Confidence 6788999999844 11111 1111 001111334455556778888988888666633334455543
Q ss_pred ----------------C-------------------------CHHHHHHHHHHHHCCCEEEEcceeeecccCCCC--HHH
Q 001963 104 ----------------Q-------------------------SEEVQNVVKQLVNSGQLELINGGMCMHDEAAPH--YID 140 (990)
Q Consensus 104 ----------------~-------------------------~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~--~es 140 (990)
. .++.-..+|+|++.|++|++++++.-+=-.+.. .++
T Consensus 79 ~~~~~~~~~e~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~li~~~r~L~~~G~vEll~~~y~H~ilPLl~d~~ed 158 (528)
T 2b5d_X 79 EKLIELANKEVERTKKEHPLKHKMAKFYREHFEKILNVFRSYDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEV 158 (528)
T ss_dssp HHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHH
T ss_pred HHHHHHHhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHCCCEEEEcCchhhHHHHhcCCCHHH
Confidence 1 222336789999999999999999777655555 799
Q ss_pred HHHHHHHHHHHHHHHcCCCCcceeecCCCCCchhhHHHHHhhcCCcEEEEee
Q 001963 141 MIDQTTLGHRYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFDFLFFAR 192 (990)
Q Consensus 141 ~i~ql~~G~~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~~~~~~R 192 (990)
...|+..|.+.+++.||.+|+.-|.+-. +.+..+..+| +++||+++++.-
T Consensus 159 ~~~QI~~g~~~~~~~FG~~P~G~WlpE~-a~~~~l~~~l-~~~Gi~y~i~d~ 208 (528)
T 2b5d_X 159 VNAQITVGVKNYEKHMKKHPRGIWLAEC-GYYQGLDLYL-AQNNVEYFFVDS 208 (528)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEECGGG-CBCTTHHHHH-HHTTCCEEEECT
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEECchh-ccChhHHHHH-HHcCCeEEEECc
Confidence 9999999999999999999999999987 8999999999 899999999864
No 13
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=95.11 E-value=1.7 Score=46.68 Aligned_cols=276 Identities=13% Similarity=0.050 Sum_probs=150.4
Q ss_pred CCCCCCeeEEEEEeCccCCCccchhhhheeec-cCccchhhhHHHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCH
Q 001963 29 AGIVPGKINVHLVPHSHDDVGWLKTVDQYYVG-SNNSIQVACVQNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSE 106 (990)
Q Consensus 29 ~~~~~~~~~V~lvpHSH~D~gWl~t~~ey~~~-~~~~i~~~~v~~il~~vi~~L~~~p~-~kF~~~e~~~~~~w~~~~~p 106 (990)
.+...+++-|.++-..=-+.+|+..-...-.. .....-...-..-+..+++.|+++.- .+|-..... .+..|
T Consensus 18 ~wP~g~r~av~~~~d~e~~~~~~~~~~~~~~~~~~~s~~~yG~~~~~~rll~ll~~~~v~aTfFv~g~~------~~~~p 91 (300)
T 3rxz_A 18 SWPDGKTCAVAFTFDVDAESPLLTTDPAFADRMGTMSHQAYGPLVGVPRLLGILDEFNVPGTFFVPGYT------AHRHP 91 (300)
T ss_dssp CCSTTCCEEEEEEEECCTTHHHHHHCGGGGGCHHHHHHHHHHHHTHHHHHHHHHHHTTCCEEEEECHHH------HHHSH
T ss_pred CCCCCCEEEEEEEECCCCCccccCCCCccccCcccccccccCcHHHHHHHHHHHHHcCCCEEEEEEHHH------HhhCH
Confidence 45556667777777554444554321110000 00000001224557788899988853 335444322 12333
Q ss_pred HHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCC-CchhhHHHHHhhcCC
Q 001963 107 EVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFG-HSAVQAYLLSAEVGF 185 (990)
Q Consensus 107 ~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~~fG~~p~v~w~~D~FG-hs~~~p~ll~~~~G~ 185 (990)
+.+|+++++| .||.+=||.-.+-...+.+.+.++|..+.+.|++.+|..|+ +|-+ |+| ++..+..++ +++||
T Consensus 92 ---~~v~~~~~~G-hEIg~H~~~H~~~~~~s~~~~~~ei~~~~~~l~~~~G~~p~-~fr~-P~g~~~~~~~~~l-~e~G~ 164 (300)
T 3rxz_A 92 ---EPIRSIARAG-HEIAHHGYLHESLVGADEDTERKILTRGIEALEEVAGVHPV-GYRA-PMWEMNWHTPKLL-AEFGF 164 (300)
T ss_dssp ---HHHHHHHHTT-CEEEECCSSCCCCTTCCHHHHHHHHHHHHHHHHHHHSCCCC-EECC-GGGCCCTTHHHHH-HHTTC
T ss_pred ---HHHHHHHHcC-CEEEecCCCCcccccCCHHHHHHHHHHHHHHHHHHhCCCCc-EEEC-CCCCCCHHHHHHH-HHcCC
Confidence 6789999999 78988899877777789999999999999999999999876 3433 444 467889999 89999
Q ss_pred cEEEEeecCHHHHHHhhhcCceeEEEeeCCCCCCCCceeEeeCCCCCCCCC-CCCccc-cCCCCCCccCCccccCCChHH
Q 001963 186 DFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGISPKNYEPPS-DNFYFE-VGDTSPIVQDDMNLFDYNVPE 263 (990)
Q Consensus 186 ~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~~s~i~t~~~~~~Y~~p~-~~f~f~-~~~~~~p~~~~~~~~~~nv~~ 263 (990)
.+..-.+.+. ..|+-+. + +..++ .+|.++..-+ ..|.+. ....+. ...+.++
T Consensus 165 ~ydss~~~~~-----------~Py~~~~-~----~~~l~--~iP~~~~~~D~~~~~~~~~~~~~~--------~~~~~~~ 218 (300)
T 3rxz_A 165 LYDSTLMDSD-----------HPYELAV-G----DGSLV--ELPVSWALDDWQQYCFVPDFSGTG--------LIETPAK 218 (300)
T ss_dssp SEECCCCSCS-----------SCEEBCC-T----TSCCE--ECCCCGGGBSHHHHCCBTTTBCSS--------CCCCHHH
T ss_pred EEEeeccCCC-----------CceEeec-C----CCCeE--EEeeeeecCCcHhhhcccccccCC--------CCCCHHH
Confidence 9876554431 1222211 1 22232 2343321110 011111 000000 0012222
Q ss_pred HHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHHHHHhcCCCeeEEeCChhhHHHHHHhcC-CCCCccc
Q 001963 264 RVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFIHYVNQDGRVNALYSTPSMYIDAKYAAN-ESWPLKT 342 (990)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~il~~~G~Df~y~~a~~~~~~~~~li~~~N~~~~~~i~~sT~~~Yf~a~~~~~-~~~p~~~ 342 (990)
..+.+.+.+... |..+. ++.++..............++++++++.+. ..+.+.|.++..+-..+.. ...++-.
T Consensus 219 ~~~~~~~~fd~~---~~~g~-~~~i~~H~~~~g~p~~~~~l~~~l~~~~~~--~~V~~~t~~eia~~~~~~~~~~~~v~~ 292 (300)
T 3rxz_A 219 AIELWRAELNAM---RDIGG-AWVLTNHPFLSGRPGRAAALREFIAEVCAM--DDVWVAGMSQIAEHVRAQKLTPRTLTR 292 (300)
T ss_dssp HHHHHHHHHHHH---HHHTC-EEEEEECHHHHTSHHHHHHHHHHHHHHHTC--TTEEECCHHHHHHHHHHTCCCCBCCCC
T ss_pred HHHHHHHHHHHH---HHcCC-eEEEEEChhhcCCHHHHHHHHHHHHHHHhC--CCEEEEcHHHHHHHHHhhcCCCccccC
Confidence 233333333221 21121 233332221122234467889999999875 3478899999988876653 4566778
Q ss_pred CCCcccc
Q 001963 343 DDFFPYA 349 (990)
Q Consensus 343 gDf~py~ 349 (990)
||+.|.+
T Consensus 293 ~~~~~~~ 299 (300)
T 3rxz_A 293 PELTPVA 299 (300)
T ss_dssp CCCC---
T ss_pred cccccCC
Confidence 8887754
No 14
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=94.22 E-value=4.1 Score=44.18 Aligned_cols=222 Identities=14% Similarity=0.086 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHhCC-CCeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHH
Q 001963 71 QNVLDSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 149 (990)
Q Consensus 71 ~~il~~vi~~L~~~p-~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~ 149 (990)
..-+..+++.|+++- ..+|-..... .+..| +.+|+++++| .||-+=+|.-.+-...+.+.+.++|..+.
T Consensus 85 ~~~~~rll~lL~~~~v~aTfFv~g~~------~~~~p---~~v~~i~~~G-hEIg~H~~~H~~~~~ls~~~~~~ei~~~~ 154 (321)
T 3s6o_A 85 RAGVWRILREFDKRGLPLTVFGVGMA------IERHP---ELARAFVELG-HEIACHGWRWIHYQDMTPEREAEHMRLGM 154 (321)
T ss_dssp HTHHHHHHHHHHHHTCCCEEEECHHH------HHHCH---HHHHHHHHTT-CEEEECCSSCSCCTTCCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHcCCCEEEEEEHHH------hhhCH---HHHHHHHHcC-CEEeeCCccccccccCCHHHHHHHHHHHH
Confidence 345777888888774 3455554322 23344 4789999999 78988888877777788999999999999
Q ss_pred HHHHHHcCCCCcceeecCCCCCchhhHHHHHhhcC-CcEEEEeecCHHHHHHhhhcCceeEEEeeCCCCCCCCceeEeeC
Q 001963 150 RYIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVG-FDFLFFARIDYQDRAKRINEKTLEVVWRASKSLGSSAQIMTGIS 228 (990)
Q Consensus 150 ~~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G-~~~~~~~Ri~~~~k~~~~~~~~~eF~W~g~d~~~~~s~i~t~~~ 228 (990)
+.|++..|..|+ +|- .-.++..+..++ +++| |.+-.-.+.+. ..|+-+..+.. +...-...+
T Consensus 155 ~~l~~~~G~~p~-g~r--~g~~s~~t~~ll-~e~G~f~Ydss~~~dd-----------~Py~~~~~~~~--g~~~~l~~i 217 (321)
T 3s6o_A 155 EAIERVTGVRPL-GWY--TGRDSPNTHRLV-AEYGGFLYDSDHYGDD-----------LPFWMDVEVSG--GASVPQLIV 217 (321)
T ss_dssp HHHHHHHSCCCC-EEC--CSSCCTTHHHHH-HHHCCCSEECCCCSCS-----------SCEEEEEECTT--SCEEEEEEC
T ss_pred HHHHHHhCCCcc-cEE--CCCCCHHHHHHH-HHcCCeEEEEeccCCC-----------CCcceeccCcC--CCCCCEEEE
Confidence 999999999876 455 335778899999 8999 99876554431 23433322211 331222245
Q ss_pred CCCCCCCCCCCccccCCCCCCccCCccccCCChHHHHHHHHHHHHHHhhhcCCCeEEEeecCCCCCcchHHHHHHHHHHH
Q 001963 229 PKNYEPPSDNFYFEVGDTSPIVQDDMNLFDYNVPERVNDFVSAAIAQANITRTNHIMWTMGTDFKYQYAHTWFRQMDKFI 308 (990)
Q Consensus 229 ~~~Y~~p~~~f~f~~~~~~~p~~~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~il~~~G~Df~y~~a~~~~~~~~~li 308 (990)
|.+.... .+.|... .. . .+.++-.+.+.+.+...-.......-++++|--............+++++
T Consensus 218 P~t~~~~--D~~~~~~---~g------~--~~~~~~~~~l~~~Fd~~y~eg~~ap~~~~i~lH~~~~g~p~r~~~le~fL 284 (321)
T 3s6o_A 218 PYTLDAN--DMRFATP---QG------F--NTADHFFHYLRDAFDVLYEEGDEAPKMMSIGMHCRLLGRPGRFRALQRFL 284 (321)
T ss_dssp CCCSSSB--GGGGSSS---SC------C--CSHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEETTTTTSHHHHHHHHHHH
T ss_pred eEeeeeC--CeeeecC---CC------C--CCHHHHHHHHHHHHHHHHHhCCCCCceEEEEeChHHcCCHHHHHHHHHHH
Confidence 6332211 0111100 00 0 01222223333333322111111112334332222222233357889999
Q ss_pred HHHhcCCCeeEEeCChhhHHHHHHhc
Q 001963 309 HYVNQDGRVNALYSTPSMYIDAKYAA 334 (990)
Q Consensus 309 ~~~N~~~~~~i~~sT~~~Yf~a~~~~ 334 (990)
+++.+.. .|.+.|..+..+...+.
T Consensus 285 ~~i~~~~--~Vw~~t~~eia~~~~~~ 308 (321)
T 3s6o_A 285 DHIERHD--RVWVARRVEIARHWREH 308 (321)
T ss_dssp HHHHTCS--SEEECCHHHHHHHHHHH
T ss_pred HHHHhCC--CEEEEcHHHHHHHHHhh
Confidence 9998764 47888998887776654
No 15
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=94.18 E-value=2.8 Score=45.18 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHH
Q 001963 72 NVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHR 150 (990)
Q Consensus 72 ~il~~vi~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~ 150 (990)
..+..+++.|+++.- .+|-...... +.+| +.+|+++++| .||-+=+|.-.+-...+.+.+.++|..+.+
T Consensus 81 ~~~~~ll~iL~~~~v~aTfFv~g~~~------~~~p---~~v~~i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~ 150 (308)
T 3cl6_A 81 AGVWRILKLFKAFDIPLTIFAVAMAA------QRHP---DVIRAMVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIR 150 (308)
T ss_dssp THHHHHHHHHHHTTCCCEEEECHHHH------HHCH---HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEeEHHHH------HHCH---HHHHHHHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHH
Confidence 456778999988853 4455543221 2344 5789999999 789889997777667789999999999999
Q ss_pred HHHHHcCCCCcceeecCCCCCchhhHHHHHhhcC-CcEEEEee
Q 001963 151 YIKEQFNVTPRIGWQIDPFGHSAVQAYLLSAEVG-FDFLFFAR 192 (990)
Q Consensus 151 ~l~~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G-~~~~~~~R 192 (990)
.|++.+|..|+ +|-. | .++..+..++ ++.| |.+..-.+
T Consensus 151 ~l~~~~G~~p~-g~r~-~-~~~~~~~~~l-~~~G~~~y~ss~~ 189 (308)
T 3cl6_A 151 ILTELTGERPL-GWYT-G-RTGPNTRRLV-MEEGGFLYDCDTY 189 (308)
T ss_dssp HHHHHHSSCCS-EECC-S-SCCTTHHHHH-HHHCCCSEECCCC
T ss_pred HHHHHhCCCcc-eEEC-C-CCCHHHHHHH-HHCCCceEEeccC
Confidence 99999998876 5664 3 5688899999 8999 98865444
No 16
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=91.31 E-value=7.1 Score=42.38 Aligned_cols=108 Identities=17% Similarity=0.201 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHH
Q 001963 71 QNVLDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGH 149 (990)
Q Consensus 71 ~~il~~vi~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~ 149 (990)
+.-+..+++.|+++-- .+|-..... + +.. .+.+|+++++|- ||.+=||.=.+-..-+.+.+.++|..+.
T Consensus 73 ~~~~~rlL~lL~~~~v~aTfFv~g~~-~-----~~~---p~~v~~i~~~Gh-EIg~H~~~H~~~~~~s~~~~~~ei~~~~ 142 (326)
T 3qbu_A 73 EVGIPRLLKLFKKYHLPATWFVPGHS-I-----ETF---PEQMKMIVDAGH-EVGAHGYSHENPIAMSTKQEEDVLLKSV 142 (326)
T ss_dssp HTHHHHHHHHHHHTTCCCEEECCHHH-H-----HHC---HHHHHHHHTTTC-EEEBCCSSCCCGGGSCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHcCCCEEEEEEhHH-h-----hhC---HHHHHHHHHcCC-EEEeCCCCCcChhhCCHHHHHHHHHHHH
Confidence 3456778889988753 445544322 1 223 357899999997 8988888777666778999999999999
Q ss_pred HHHHHHcCCCCcceeecCCCC-CchhhHHHHHhhcCCcEEEEe
Q 001963 150 RYIKEQFNVTPRIGWQIDPFG-HSAVQAYLLSAEVGFDFLFFA 191 (990)
Q Consensus 150 ~~l~~~fG~~p~v~w~~D~FG-hs~~~p~ll~~~~G~~~~~~~ 191 (990)
+.|++.+|..|+ +|- =|+| .+..+..++ +++||.+..-.
T Consensus 143 ~~l~~~~G~~p~-~fr-~P~g~~~~~~~~~l-~e~G~~ydss~ 182 (326)
T 3qbu_A 143 ELIKDLTGKAPT-GYV-APWWEFSNITNELL-LKHGFKYDHSL 182 (326)
T ss_dssp HHHHHHHSSCCC-EEC-CGGGCCSSHHHHHH-HTTTCCEECCC
T ss_pred HHHHHHHCCCCc-EEE-CCCCCCCHHHHHHH-HHcCCEEEeec
Confidence 999999998876 343 3444 467888999 89999985433
No 17
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=89.53 E-value=1.5 Score=45.28 Aligned_cols=102 Identities=12% Similarity=0.185 Sum_probs=75.6
Q ss_pred HHHHHHHHHhCC-CCeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHH
Q 001963 74 LDSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYI 152 (990)
Q Consensus 74 l~~vi~~L~~~p-~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l 152 (990)
...+++.|+++. ..+|-..+. ++ +.+| +.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.|
T Consensus 47 ~~~il~iL~~~~v~ATfFv~g~-~~-----~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 116 (230)
T 2y8u_A 47 TPQLLDLLSRYSARATFFVLGD-AA-----AQNP---GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVI 116 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEECHH-HH-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecH-HH-----hHCH---HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 345667776664 345554432 12 2233 6899999999 78989999887777778999999999999999
Q ss_pred HHHcCCCCcceeecCCCCC-chhhHHHHHhhcCCcEE
Q 001963 153 KEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 188 (990)
Q Consensus 153 ~~~fG~~p~v~w~~D~FGh-s~~~p~ll~~~~G~~~~ 188 (990)
++..|..|+ +--=|+|. +..+..++ +++|+..+
T Consensus 117 ~~~~G~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~~ 150 (230)
T 2y8u_A 117 RPALGVAPA--YMRPPYLETNELVLQVM-RDLDYRVI 150 (230)
T ss_dssp HHHHSSCBS--EECCGGGCCCHHHHHHH-HHTTCEEE
T ss_pred HHHhCCCCc--EEECCCCCCCHHHHHHH-HHcCCEEE
Confidence 999998775 45567775 56778888 89998754
No 18
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=87.88 E-value=1.8 Score=43.28 Aligned_cols=101 Identities=19% Similarity=0.199 Sum_probs=75.3
Q ss_pred HHHHHHHHHhCC-CCeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHH
Q 001963 74 LDSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYI 152 (990)
Q Consensus 74 l~~vi~~L~~~p-~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l 152 (990)
...+++.|+++. ..+|-.... ++ +.+| +.+|+++++| .||-+=+|.-++-...+.+.+.+++....+.|
T Consensus 19 ~~~il~iL~~~~v~aTfFv~g~-~~-----~~~~---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 88 (195)
T 2cc0_A 19 TQSLLNALRQNGLRATMFNQGQ-YA-----AQNP---SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAI 88 (195)
T ss_dssp HHHHHHHHHHTTCCCEEEECHH-HH-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCh-hh-----hhCH---HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHH
Confidence 456677777764 344554432 11 2233 5789999999 78989999877777778999999999999999
Q ss_pred HHHcCCCCcceeecCCCCC-chhhHHHHHhhcCCcE
Q 001963 153 KEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDF 187 (990)
Q Consensus 153 ~~~fG~~p~v~w~~D~FGh-s~~~p~ll~~~~G~~~ 187 (990)
++..|..|+ +--=|+|. +..+..++ +++|+..
T Consensus 89 ~~~~G~~~~--~fr~P~G~~~~~~~~~~-~~~G~~~ 121 (195)
T 2cc0_A 89 AGAGGGTPK--LFRPPYGETNATLRSVE-AKYGLTE 121 (195)
T ss_dssp HHTTSCCCS--EECCGGGCCCHHHHHHH-HHTTCEE
T ss_pred HHHhCCCCC--EEECCCCCcCHHHHHHH-HHCCCeE
Confidence 999998875 45567886 45677888 8999875
No 19
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=75.51 E-value=4.9 Score=41.97 Aligned_cols=106 Identities=13% Similarity=0.177 Sum_probs=75.6
Q ss_pred HHHHHHHHHhCC-CCeEEEechhHHHHHHhcC-CHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHH
Q 001963 74 LDSLIPALVADK-NRKFIYVEQAFFQRWWRDQ-SEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRY 151 (990)
Q Consensus 74 l~~vi~~L~~~p-~~kF~~~e~~~~~~w~~~~-~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~ 151 (990)
...+++.|+++. ..+|-..... +... .....+.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.
T Consensus 56 ~~~il~iL~~~~vkATFFv~g~~-----~g~~~~~~~p~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~ 129 (254)
T 2iw0_A 56 TPQLLDILKQNDVRATFFVNGNN-----WANIEAGSNPDTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEA 129 (254)
T ss_dssp HHHHHHHHHHHTCCCEEEECSBS-----SSBTTSTTHHHHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEECCc-----ccccccccCHHHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHH
Confidence 345566666654 3444444321 1000 113347899999999 7899999987777777899999999999999
Q ss_pred HHHHcCCCCcceeecCCCCC-chhhHHHHHhhcCCcEE
Q 001963 152 IKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 188 (990)
Q Consensus 152 l~~~fG~~p~v~w~~D~FGh-s~~~p~ll~~~~G~~~~ 188 (990)
|++..|..|+ +--=|+|. +..+..++ +++|+..+
T Consensus 130 l~~~~G~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 164 (254)
T 2iw0_A 130 TRRIDGFAPK--YMRAPYLSCDAGCQGDL-GGLGYHII 164 (254)
T ss_dssp HHHHHSCEES--EECCGGGCCCHHHHHHH-HHTTCEEE
T ss_pred HHHHhCCCCC--EEECCCCCCCHHHHHHH-HHcCCeEE
Confidence 9999998765 45567775 56778888 89998753
No 20
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=75.29 E-value=5.1 Score=41.40 Aligned_cols=100 Identities=12% Similarity=0.150 Sum_probs=73.6
Q ss_pred HHHHHHHhCC-CCeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHH
Q 001963 76 SLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKE 154 (990)
Q Consensus 76 ~vi~~L~~~p-~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~ 154 (990)
.+++.|+++. ..+|-.... ++ +.+| +.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.|++
T Consensus 60 ~il~iL~~~~v~ATfFv~g~-~~-----~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~ 129 (240)
T 1ny1_A 60 KVLDVLKKHRVTGTFFVTGH-FV-----KDQP---QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYK 129 (240)
T ss_dssp HHHHHHHHTTCCCEEEECHH-HH-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeCh-hh-----hhCH---HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHHH
Confidence 4566776664 344544432 12 2233 5789999999 7899999987777777899999999999999999
Q ss_pred HcCCC-CcceeecCCCCC-chhhHHHHHhhcCCcEE
Q 001963 155 QFNVT-PRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 188 (990)
Q Consensus 155 ~fG~~-p~v~w~~D~FGh-s~~~p~ll~~~~G~~~~ 188 (990)
..|.. |+ +--=|+|. +..+..++ +++|+..+
T Consensus 130 ~~G~~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 162 (240)
T 1ny1_A 130 ITGKQDNL--YLRPPRGVFSEYVLKET-KRLGYQTV 162 (240)
T ss_dssp HHSCCCCC--EECCGGGEECHHHHHHH-HHTTCEEB
T ss_pred HhCCCCCc--EEeCCCCCCCHHHHHHH-HHcCCEEE
Confidence 99986 54 45567775 56788888 89998753
No 21
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=73.05 E-value=5.7 Score=41.26 Aligned_cols=100 Identities=16% Similarity=0.184 Sum_probs=73.4
Q ss_pred HHHHHHHhCC-CCeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHH
Q 001963 76 SLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKE 154 (990)
Q Consensus 76 ~vi~~L~~~p-~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~ 154 (990)
.+++.|+++. ..+|-.... ++ +..| +.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.|++
T Consensus 72 ~il~iL~~~~v~ATfFv~g~-~~-----~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~ 141 (247)
T 2j13_A 72 KILDVLKEKKVPATFFVTGH-YI-----KTQK---DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIKK 141 (247)
T ss_dssp HHHHHHHHHTCCEEEEECHH-HH-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeCh-hh-----hhCH---HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHHH
Confidence 4566665553 344544432 11 2233 6789999999 7898999988777777899999999999999999
Q ss_pred HcCCC-CcceeecCCCCC-chhhHHHHHhhcCCcEE
Q 001963 155 QFNVT-PRIGWQIDPFGH-SAVQAYLLSAEVGFDFL 188 (990)
Q Consensus 155 ~fG~~-p~v~w~~D~FGh-s~~~p~ll~~~~G~~~~ 188 (990)
.+|.. |+ |.-=|+|. +..+..++ +++|+..+
T Consensus 142 ~~G~~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 174 (247)
T 2j13_A 142 VTGQKEVK--YVRPPRGVFSERTLALT-KEMGYYNV 174 (247)
T ss_dssp HHCCSCCC--EECCGGGEECHHHHHHH-HHTTCEEE
T ss_pred HhCCCCCc--EEeCCCCCCCHHHHHHH-HHCCCEEE
Confidence 99987 43 45557774 66778888 89999864
No 22
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=72.25 E-value=11 Score=39.57 Aligned_cols=81 Identities=17% Similarity=0.272 Sum_probs=62.5
Q ss_pred HHHHHHHHHCCCEEEEcceeeecccCC-----------------------CC----HHHHHHHHHHHHHHHHHHcCCCCc
Q 001963 109 QNVVKQLVNSGQLELINGGMCMHDEAA-----------------------PH----YIDMIDQTTLGHRYIKEQFNVTPR 161 (990)
Q Consensus 109 ~~~vk~lV~~Grle~vgGgwv~~Dea~-----------------------~~----~es~i~ql~~G~~~l~~~fG~~p~ 161 (990)
.+++|+++++|-.||-+=+|..+.-.. .+ .+.+.+++....+.|++.+|..|+
T Consensus 126 ~~~lr~m~~~G~~eIgsHT~~hH~~~~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~~~~G~~~~ 205 (268)
T 3vus_A 126 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 205 (268)
T ss_dssp HHHHHHHHHTTSEEECBCCSSCCSBCCCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHCCCeEEecCccccccccccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 478999999999999888887553211 12 345788899999999999999876
Q ss_pred ceeecCCCCC-chhhHHHHHhhcCCcEEEEee
Q 001963 162 IGWQIDPFGH-SAVQAYLLSAEVGFDFLFFAR 192 (990)
Q Consensus 162 v~w~~D~FGh-s~~~p~ll~~~~G~~~~~~~R 192 (990)
+..=|||. +...-.++ +++||+..+..+
T Consensus 206 --~fr~PyG~~n~~~~~~~-~~~Gy~~a~t~~ 234 (268)
T 3vus_A 206 --VFVWPYGEANGIAIEEL-KKLGYDMFFTLE 234 (268)
T ss_dssp --EEECGGGCCCHHHHHHH-HHTTCCEEECCC
T ss_pred --EEEeCCCcCCHHHHHHH-HHCCCcEEEEec
Confidence 33459997 66778888 899999887554
No 23
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=72.08 E-value=7.6 Score=40.45 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=73.7
Q ss_pred HHHHHHHHhCC-CCeE-EEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeee--cccCCCCHHHHHHHHHHHHH
Q 001963 75 DSLIPALVADK-NRKF-IYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCM--HDEAAPHYIDMIDQTTLGHR 150 (990)
Q Consensus 75 ~~vi~~L~~~p-~~kF-~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~--~Dea~~~~es~i~ql~~G~~ 150 (990)
..+++.|+++. ..+| -..+. |.+.+|+ +.+|+++++| .||-+=+|.- ++-...+.+.+.+++....+
T Consensus 42 ~~il~iL~~~~v~ATF~Fv~g~------~~~~~p~--~~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~ 112 (254)
T 2vyo_A 42 DRILNTLDELGVKATFSFTVNQ------KAVGNVG--QLYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREID 112 (254)
T ss_dssp HHHHHHHHHHTCCCEEEECCSS------CCCGGGT--HHHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEccCh------HHhHCHH--HHHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHH
Confidence 34566666553 3456 43332 1223443 3899999999 7898899988 67666789999999999999
Q ss_pred HHHHHcCCCCcceeecCCC--CC-chhhHHHHHhhcCCcE
Q 001963 151 YIKEQFNVTPRIGWQIDPF--GH-SAVQAYLLSAEVGFDF 187 (990)
Q Consensus 151 ~l~~~fG~~p~v~w~~D~F--Gh-s~~~p~ll~~~~G~~~ 187 (990)
.|++..|..|+ +--=|+ |. +..+..++ +++|+..
T Consensus 113 ~l~~~~G~~~~--~fr~P~~~G~~~~~~~~~l-~~~G~~~ 149 (254)
T 2vyo_A 113 TIDGLSGTEIR--YAAVPICNGQVNSEMYNIL-TERGVLP 149 (254)
T ss_dssp HHHHHHTSCCC--EEECCCBTTEECHHHHHHH-HTTTCEE
T ss_pred HHHHHHCCCCe--EEeCCccCCCCCHHHHHHH-HHCCCEE
Confidence 99999998775 455677 74 56788888 8999874
No 24
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=67.49 E-value=6.5 Score=46.41 Aligned_cols=81 Identities=17% Similarity=0.271 Sum_probs=62.6
Q ss_pred HHHHHHHHHCCCEEEEcceeeecccC------------CC-----------C----HHHHHHHHHHHHHHHHHHcCCCCc
Q 001963 109 QNVVKQLVNSGQLELINGGMCMHDEA------------AP-----------H----YIDMIDQTTLGHRYIKEQFNVTPR 161 (990)
Q Consensus 109 ~~~vk~lV~~Grle~vgGgwv~~Dea------------~~-----------~----~es~i~ql~~G~~~l~~~fG~~p~ 161 (990)
.+.+|++.++|-+||-+=+|..|--. ++ + -+.+.+++....+.|++.+|..|+
T Consensus 130 w~qlrem~~sG~~EIGsHT~shH~~l~~~p~G~~~Pa~l~r~~~~~~~~~es~~e~~~~i~~EL~~Sk~~Le~~lG~~~~ 209 (618)
T 4f9d_A 130 WQQVREVARSRLVELASHTWNSHYGIQANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPH 209 (618)
T ss_dssp HHHHHHHHHHTSEEECBCCSSCCSEEECSTTCCEEEGGGSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHHHHCCCcEEeecccccccccccccccccccchhcccccccccccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 47899999999999977777643211 00 1 256899999999999999999876
Q ss_pred ceeecCCCCC-chhhHHHHHhhcCCcEEEEee
Q 001963 162 IGWQIDPFGH-SAVQAYLLSAEVGFDFLFFAR 192 (990)
Q Consensus 162 v~w~~D~FGh-s~~~p~ll~~~~G~~~~~~~R 192 (990)
+..=|||. +...-.++ +++||+..+..+
T Consensus 210 --~FayPyG~~n~~~~~~a-ke~Gy~~afTt~ 238 (618)
T 4f9d_A 210 --VFVWPYGEANGIAIEEL-KKLGYDMFFTLE 238 (618)
T ss_dssp --EEECGGGCCCHHHHHHH-HHTTCCEEECCC
T ss_pred --EEEcCCCCCCHHHHHHH-HHcCCEEEEEec
Confidence 33449996 77888888 899999988554
No 25
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=66.39 E-value=15 Score=37.07 Aligned_cols=88 Identities=18% Similarity=0.208 Sum_probs=64.0
Q ss_pred HHHHHHHHhCC-CCeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHH
Q 001963 75 DSLIPALVADK-NRKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 153 (990)
Q Consensus 75 ~~vi~~L~~~p-~~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~ 153 (990)
..+++.|+++. ..+|-..... + +..|+ +.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.|+
T Consensus 21 ~~il~iL~~~~v~ATfFv~g~~-~-----~~~p~--~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 91 (216)
T 2c71_A 21 ARVLDKLDKYNVKATFMVVGQR-V-----NDSTA--AIIRRMVNSG-HEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQ 91 (216)
T ss_dssp HHHHHHHHHHTCCCEEEECGGG-C-----SHHHH--HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEChh-h-----hhCHH--HHHHHHHHCC-CEEeeCCcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 35677777664 3445444321 1 11222 4899999999 789999998877777789999999999999999
Q ss_pred HHcCCCCcceeecCCCCCch
Q 001963 154 EQFNVTPRIGWQIDPFGHSA 173 (990)
Q Consensus 154 ~~fG~~p~v~w~~D~FGhs~ 173 (990)
+..|..|+ +--=|+|...
T Consensus 92 ~~~G~~~~--~fr~P~G~~~ 109 (216)
T 2c71_A 92 KYAGTTPK--FFRPPNLETS 109 (216)
T ss_dssp HHHSCCCS--EECCGGGCCC
T ss_pred HhhCCCCe--EEECCCCCCC
Confidence 99998876 4556888643
No 26
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=62.12 E-value=22 Score=40.10 Aligned_cols=97 Identities=11% Similarity=0.118 Sum_probs=71.1
Q ss_pred HHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHH
Q 001963 75 DSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIK 153 (990)
Q Consensus 75 ~~vi~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~ 153 (990)
..+++.|+++.- .+|-..+. |.+.+| +.+|+++++| .||-+=+|.-++-...+.+.+.+++..+.+.|+
T Consensus 252 ~~il~iL~k~~vkATFFvig~------~i~~~p---~~lr~m~~~G-heIgnHT~sH~~l~~ls~~~~~~EI~~s~~~L~ 321 (431)
T 2c1i_A 252 PQVLETLAKYDIKATFFVLGK------NVSGNE---DLVKRIKSEG-HVVGNHSWSHPILSQLSLDEAKKQITDTEDVLT 321 (431)
T ss_dssp HHHHHHHHHTTCCCEEEECGG------GTTTCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEEECc------cccCCH---HHHHHHHHCC-CEEeecCCCCcccccCCHHHHHHHHHHHHHHHH
Confidence 367788877643 44443332 223344 5799999999 789899998777666789999999999999999
Q ss_pred HHcCCCCcceeecCCCCCchhhHHHHHhhcCCc
Q 001963 154 EQFNVTPRIGWQIDPFGHSAVQAYLLSAEVGFD 186 (990)
Q Consensus 154 ~~fG~~p~v~w~~D~FGhs~~~p~ll~~~~G~~ 186 (990)
+..|..|+ +-.=|||... +.+. +.+|+.
T Consensus 322 ~~~G~~~~--~fr~PyG~~n--~~v~-~~~G~~ 349 (431)
T 2c1i_A 322 KVLGSSSK--LMRPPYGAIT--DDIR-NSLDLS 349 (431)
T ss_dssp HHHSCCCC--EECCGGGCCC--HHHH-HTSSCE
T ss_pred HhhCCCCe--EEECCCCCCC--HHHH-HHCCCe
Confidence 99998765 4455888754 5567 677765
No 27
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=54.49 E-value=9.5 Score=41.69 Aligned_cols=79 Identities=11% Similarity=0.091 Sum_probs=57.1
Q ss_pred HHHHHHHHHHCCCEEEEcceeeecccCCCCHHHHHHHHHHHHHHHHHHcCCCCcceeecCCCCC-chhhHHHHHhhcCCc
Q 001963 108 VQNVVKQLVNSGQLELINGGMCMHDEAAPHYIDMIDQTTLGHRYIKEQFNVTPRIGWQIDPFGH-SAVQAYLLSAEVGFD 186 (990)
Q Consensus 108 ~~~~vk~lV~~Grle~vgGgwv~~Dea~~~~es~i~ql~~G~~~l~~~fG~~p~v~w~~D~FGh-s~~~p~ll~~~~G~~ 186 (990)
..++||+|.++|-+||-+=+|.-++-.- ....-+++....+.|++.+|..|+ +..=|||. +.....+. +.|++
T Consensus 246 sw~qIrem~~~G~~eIGsHT~sH~~L~~--ls~~e~EI~~Sk~~Le~~lG~~v~--~FAYPyG~yn~~v~~~a--k~gy~ 319 (360)
T 4hd5_A 246 STSEIKEMVDSGIFSVQSHTATHADLPK--ITNYEEELKGSKEKLEKITGKPVI--AIAYXFGHVDDKVVTET--KKYYQ 319 (360)
T ss_dssp CHHHHHHHHHTTSEEEEECCSSCCCGGG--CSCHHHHHHHHHHHHHHHHSSCCC--EEECGGGCCCHHHHHHH--TTTCS
T ss_pred CHHHHHHHHHcCCceeeccCCccccccc--CCHHHHHHHHHHHHHHHHhCCCCc--EEEcCCCCCCHHHHHHH--HhCCc
Confidence 4677999999999999777776555322 223447899999999999999876 34459996 44455554 45898
Q ss_pred EEEEee
Q 001963 187 FLFFAR 192 (990)
Q Consensus 187 ~~~~~R 192 (990)
..+..+
T Consensus 320 ~AfTt~ 325 (360)
T 4hd5_A 320 FATTTK 325 (360)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 887664
No 28
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=54.27 E-value=4.8 Score=38.89 Aligned_cols=18 Identities=28% Similarity=0.407 Sum_probs=14.6
Q ss_pred cceeecCCCCCchhh-HHH
Q 001963 161 RIGWQIDPFGHSAVQ-AYL 178 (990)
Q Consensus 161 ~v~w~~D~FGhs~~~-p~l 178 (990)
+.||..|+||++|++ |.+
T Consensus 106 ~~G~v~D~fGv~W~i~~~~ 124 (163)
T 1u69_A 106 ACGWCRDKWGISWQITPRV 124 (163)
T ss_dssp STTEEECTTSCEEEEEEHH
T ss_pred EEEEEECCCCCEEEEEeEc
Confidence 778999999999983 444
No 29
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=37.90 E-value=50 Score=35.32 Aligned_cols=102 Identities=15% Similarity=0.173 Sum_probs=70.4
Q ss_pred HHHHHHHHHhCCC-CeEEEechhHHHHHHhcCCHHHHHHHHHHHHCCCEEEEcceeeecccC-----CCCHHHHHHHHHH
Q 001963 74 LDSLIPALVADKN-RKFIYVEQAFFQRWWRDQSEEVQNVVKQLVNSGQLELINGGMCMHDEA-----APHYIDMIDQTTL 147 (990)
Q Consensus 74 l~~vi~~L~~~p~-~kF~~~e~~~~~~w~~~~~p~~~~~vk~lV~~Grle~vgGgwv~~Dea-----~~~~es~i~ql~~ 147 (990)
...+++.|+++.- .+|-..+.. .+. +..+.+|+++++| .|+-+=+|.-++-. ..+.+.+.+++..
T Consensus 122 t~~iLdiL~~~~vkATFFv~G~~------i~~--~~p~~vr~i~~~G-heIgnHt~sH~~~~~~~~~~ls~~~~~~Ei~~ 192 (311)
T 2w3z_A 122 TPKILDVLAQQHVHATFFLVGCN------ITD--KVKPILQRQITEG-HALGIHSFSHVYSLLYPNRVGNTQQIVSEVTR 192 (311)
T ss_dssp HHHHHHHHHHTTCCCEEEECGGG------CCG--GGHHHHHHHHHTT-CEEEECCSSCCHHHHSGGGBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEEeChh------hcc--cCHHHHHHHHHCC-CeeeccCCccccccccccCCCCHHHHHHHHHH
Confidence 4567788877643 445444321 121 1236799999999 78888888655431 2478999999999
Q ss_pred HHHHHHHHcC--CCCcceeecCCCCCchh-----hHHHHHhhcCCcE
Q 001963 148 GHRYIKEQFN--VTPRIGWQIDPFGHSAV-----QAYLLSAEVGFDF 187 (990)
Q Consensus 148 G~~~l~~~fG--~~p~v~w~~D~FGhs~~-----~p~ll~~~~G~~~ 187 (990)
+.+.|++..| ..|+ +--=|+|.... +..++ +++|+..
T Consensus 193 ~~~~L~~~~G~~~~p~--~fR~PyG~~~~~~~~~~~~~l-~~~G~~~ 236 (311)
T 2w3z_A 193 TQNALKDQLGQNFKTG--VWRYPGGHLSWTGLEAADKQL-AAQGIQW 236 (311)
T ss_dssp HHHHHHHHHCTTBCCC--EECCTTCGGGCBCCHHHHHHH-HTTTCEE
T ss_pred HHHHHHHHhCCCCCCc--EEECCCCCcChhHHHHHHHHH-HHCCCEE
Confidence 9999999999 4444 45568887542 44688 8999875
No 30
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=26.94 E-value=38 Score=27.82 Aligned_cols=23 Identities=26% Similarity=0.627 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHCCCEEEE-ccee
Q 001963 106 EEVQNVVKQLVNSGQLELI-NGGM 128 (990)
Q Consensus 106 p~~~~~vk~lV~~Grle~v-gGgw 128 (990)
++.++-+-++|++|+||++ ||-|
T Consensus 48 ~eL~~fL~~~v~e~kL~~~~gG~Y 71 (74)
T 1ldd_A 48 QQLEGYLNTLADEGRLKYIANGSY 71 (74)
T ss_dssp HHHHHHHHHHHHTTSEECCTTTEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCCEE
Confidence 5677888999999999975 7766
No 31
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=25.65 E-value=77 Score=32.00 Aligned_cols=59 Identities=8% Similarity=0.101 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHhCCCCeEEEechhHHHHHHhcCCHH-------HHHHHHHHHHCCCEEEEccee
Q 001963 70 VQNVLDSLIPALVADKNRKFIYVEQAFFQRWWRDQSEE-------VQNVVKQLVNSGQLELINGGM 128 (990)
Q Consensus 70 v~~il~~vi~~L~~~p~~kF~~~e~~~~~~w~~~~~p~-------~~~~vk~lV~~Grle~vgGgw 128 (990)
-+--+-.++.-+++=|...|+++++.-|+.-.....|. .|++++-|=..|-|||+|-|-
T Consensus 188 ~rgWlldi~~cid~i~~~eFtL~diY~fe~~L~~~~P~N~~Ik~KIRQqLQ~LRD~g~IeFl~rG~ 253 (257)
T 4esj_A 188 SRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGK 253 (257)
T ss_dssp HHHHHHHHHHHHHHSCSSEEEHHHHHTTHHHHHHHSTTCSCHHHHHHHHHHHHHHTTSEEECSTTE
T ss_pred cccHHHHHHHHHHhcCcceeeHHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHhhcCceEEecCCc
Confidence 34556667777888888889999999888888777664 477777788899999999774
Done!