BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001966
(989 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4G24|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Mn
pdb|4G26|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Ca
Length = 501
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 340 IDGFVKQGDVEEAFRVKDELVASGNQIDLVIYNTLL------KGFCKSGK---MEKAREV 390
+D K+GDV EA R+ DE +G Q+ YN LL + +S + + ++
Sbjct: 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDI 92
Query: 391 LNEIIRMGIEPNSRTYTSLIQGYCRMRKMVSAFELLDEMKKKNLVPSVFTYGVIIDGLCH 450
++I + PN T+T+ + AF+++ +MK + P + +YG + G C
Sbjct: 93 FKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR 152
Query: 451 CGDLRQINAILGEM 464
GD + + M
Sbjct: 153 KGDADKAYEVDAHM 166
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 14/190 (7%)
Query: 585 VDGYCKEGNIAEAISKFRCMLARGILPEVQTYSVLI---------NGLSKKLELREALGI 635
+D K+G++ EA+ + G+ Y+VL+ S L I
Sbjct: 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDI 92
Query: 636 FLELLEKGLVPDVDTYNSLITSFCKICDVDKAFQLYEEMCEKGVEPNTLTYNVLIDGFCK 695
F +++ +VP+ T+ + D + AF + ++M G++P +Y + GFC+
Sbjct: 93 FKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCR 152
Query: 696 AGDLTEPFQLFDEMTKRGVPLDGSVYNALLS---GCCKEEKLEQALELFRDMLEKGLAST 752
GD + +++ M + V + ALL +K+ + L+ RD++ + ST
Sbjct: 153 KGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKST 212
Query: 753 LSFNTLIEFL 762
F+ + E+
Sbjct: 213 --FDMIEEWF 220
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 61/159 (38%), Gaps = 25/159 (15%)
Query: 690 IDGFCKAGDLTEPFQLFDEMTKRGVPLDGSVYNALLSGCCKEEKLEQALELFRDMLEKGL 749
+D K GD+ E +L+DE + GV L YN LL C E
Sbjct: 33 LDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAE----------------- 75
Query: 750 ASTLSFNTLIEFLCISNKLQEAHQLLDAMLEEQVNPNHDTYTTLINQYCKVQNMEKAKQL 809
A+T S + L + M+ ++V PN T+T + E A +
Sbjct: 76 AATES--------SPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDM 127
Query: 810 FLEMQQRNLKPATITYRSLLNGYNRMGNRSEVFVVFEEM 848
+M+ ++P +Y L G+ R G+ + + V M
Sbjct: 128 VKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHM 166
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 419 MVSAFELLDEMKKKNLVPSVFTYGVI--IDGLCHCGDLRQINA-------ILGEMITRGL 469
++ A L DE ++ + S + Y V+ + L N I +MI +
Sbjct: 42 VLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKV 101
Query: 470 KPNAIIYTNLVSTYFKKNKLQEAGKLVERMRREGITPDVSCFNSLIIGLCKAKRMDEA 527
PN +TN K+ + A +V++M+ GI P + + + G C+ D+A
Sbjct: 102 VPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKA 159
>pdb|4G23|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana With Mn
pdb|4G25|A Chain A, Crystal Structure Of Proteinaceous Rnase P 1 (Prorp1) From
A. Thaliana, Semet Substituted Form With Sr
Length = 501
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 340 IDGFVKQGDVEEAFRVKDELVASGNQIDLVIYNTLL------KGFCKSGK---MEKAREV 390
+D K+GDV EA R+ DE +G Q+ YN LL + +S + + ++
Sbjct: 33 LDXCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDI 92
Query: 391 LNEIIRMGIEPNSRTYTSLIQGYCRMRKMVSAFELLDEMKKKNLVPSVFTYGVIIDGLCH 450
+ I + PN T+T+ + AF+ + + K + P + +YG + G C
Sbjct: 93 FKQXIVDKVVPNEATFTNGARLAVAKDDPEXAFDXVKQXKAFGIQPRLRSYGPALFGFCR 152
Query: 451 CGD 453
GD
Sbjct: 153 KGD 155
Score = 34.7 bits (78), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 78/190 (41%), Gaps = 14/190 (7%)
Query: 585 VDGYCKEGNIAEAISKFRCMLARGILPEVQTYSVLI---------NGLSKKLELREALGI 635
+D K+G++ EA+ + G+ Y+VL+ S L I
Sbjct: 33 LDXCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDI 92
Query: 636 FLELLEKGLVPDVDTYNSLITSFCKICDVDKAFQLYEEMCEKGVEPNTLTYNVLIDGFCK 695
F + + +VP+ T+ + D + AF ++ G++P +Y + GFC+
Sbjct: 93 FKQXIVDKVVPNEATFTNGARLAVAKDDPEXAFDXVKQXKAFGIQPRLRSYGPALFGFCR 152
Query: 696 AGDLTEPFQLFDEMTKRGVPLDGSVYNALLS---GCCKEEKLEQALELFRDMLEKGLAST 752
GD + +++ + V + ALL +K+ + L+ RD++ + ST
Sbjct: 153 KGDADKAYEVDAHXVESEVVPEEPELAALLKVSXDTKNADKVYKTLQRLRDLVRQVSKST 212
Query: 753 LSFNTLIEFL 762
F+ + E+
Sbjct: 213 --FDXIEEWF 220
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 10/127 (7%)
Query: 690 IDGFCKAGDLTEPFQLFDEMTKRGVPLDGSVYNALLSGCCKEEK---------LEQALEL 740
+D K GD+ E +L+DE + GV L YN LL C E L + ++
Sbjct: 33 LDXCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDI 92
Query: 741 FRD-MLEKGLASTLSFNTLIEFLCISNKLQEAHQLLDAMLEEQVNPNHDTYTTLINQYCK 799
F+ +++K + + +F + + A + + P +Y + +C+
Sbjct: 93 FKQXIVDKVVPNEATFTNGARLAVAKDDPEXAFDXVKQXKAFGIQPRLRSYGPALFGFCR 152
Query: 800 VQNMEKA 806
+ +KA
Sbjct: 153 KGDADKA 159
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 9/118 (7%)
Query: 419 MVSAFELLDEMKKKNLVPSVFTYGVI--IDGLCHCGDLRQINA-------ILGEMITRGL 469
++ A L DE ++ + S + Y V+ + L N I + I +
Sbjct: 42 VLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQXIVDKV 101
Query: 470 KPNAIIYTNLVSTYFKKNKLQEAGKLVERMRREGITPDVSCFNSLIIGLCKAKRMDEA 527
PN +TN K+ + A V++ + GI P + + + G C+ D+A
Sbjct: 102 VPNEATFTNGARLAVAKDDPEXAFDXVKQXKAFGIQPRLRSYGPALFGFCRKGDADKA 159
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 23/47 (48%)
Query: 344 VKQGDVEEAFRVKDELVASGNQIDLVIYNTLLKGFCKSGKMEKAREV 390
V + D E AF + A G Q L Y L GFC+ G +KA EV
Sbjct: 116 VAKDDPEXAFDXVKQXKAFGIQPRLRSYGPALFGFCRKGDADKAYEV 162
>pdb|2RAL|A Chain A, Crystal Structure Analysis Of Double Cysteine Mutant Of
S.Epidermidis Adhesin Sdrg: Evidence For The Dock,Lock
And Latch Ligand Binding Mechanism
pdb|2RAL|B Chain B, Crystal Structure Analysis Of Double Cysteine Mutant Of
S.Epidermidis Adhesin Sdrg: Evidence For The Dock,Lock
And Latch Ligand Binding Mechanism
Length = 340
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 337 YALIDGFVKQGDVEE-----AFRVKDELVASGNQIDLVI-YNTLLKGFCKSGKMEKAREV 390
Y DG +K D E F V D+ V SG+ + + I NT+ S + K ++
Sbjct: 39 YDDSDGIIKAHDAENLIYDVTFEV-DDKVKSGDTMTVNIDKNTVPSDLTDSFAIPKIKDN 97
Query: 391 LNEIIRMGIEPNSR-----TYTSLIQGYCRMRKMVSAFELLDEMKKKN 433
EII G N+ T+T + YC ++ + +D+ K N
Sbjct: 98 SGEIIATGTYDNTNKQITYTFTDYVDKYCNIKAHLKLTSYIDKSKVPN 145
>pdb|4E51|A Chain A, Crystal Structure Of A Histidyl-Trna Synthetase Hisrs From
Burkholderia Thailandensis Bound To Histidine
pdb|4E51|B Chain B, Crystal Structure Of A Histidyl-Trna Synthetase Hisrs From
Burkholderia Thailandensis Bound To Histidine
Length = 467
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 50 QRLLTSSNVPKKLNPDVIRSVIHLNRAHNLTRLLSFFHWSERQMGT 95
QRLL ++NVP +NP ++R + + N L+ F W ++G
Sbjct: 268 QRLLKANNVPFTINPRLVRGLDYYN--------LTVFEWVTDKLGA 305
>pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Trigonal Crystal Form)
pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Orthorombic Crystal Form)
Length = 136
Score = 31.6 bits (70), Expect = 2.4, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 825 YRSLLNGYNRMGNRSEVFVVFEEMLGKGIEPDNF-TYYVMIDAHCKEGNVMEALKL--KD 881
+ +L N Y + G+ E +++ L ++P + +Y + +A+ K+G+ EA++ K
Sbjct: 4 WYNLGNAYYKQGDYDEAIEYYQKALE--LDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKA 61
Query: 882 LIFDKRMPISAEAYKAIIKALCKREEYSEALRLLNEMGESGFRLGFASCRTVANDFLREG 941
L D R SAEA+ + A K+ +Y EA+ + E R A + N + ++G
Sbjct: 62 LELDPR---SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEA-WYNLGNAYYKQG 117
Query: 942 ----VMDYAAKVLE 951
++Y K LE
Sbjct: 118 DYDEAIEYYQKALE 131
Score = 30.8 bits (68), Expect = 4.3, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 236 DAYFKVRNAEEGKRVFSEMGEKGCRPNVATYNVVIGGLCRVGFVDEAVELKNSMVEKGLV 295
+AY+K + +E + + E R A YN+ + G DEA+E +E L
Sbjct: 9 NAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLG-NAYYKQGDYDEAIEYYQKALE--LD 65
Query: 296 PDSY-TYVNLIYGFSAAKRLGDVRLVLSELIGKGLKLD---TVAYYALIDGFVKQGDVEE 351
P S + NL +A + GD + E K L+LD A+Y L + + KQGD +E
Sbjct: 66 PRSAEAWYNL---GNAYYKQGDYDEAI-EYYQKALELDPRSAEAWYNLGNAYYKQGDYDE 121
Query: 352 A 352
A
Sbjct: 122 A 122
>pdb|3PE3|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|B Chain B, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE3|D Chain D, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE4|A Chain A, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3PE4|C Chain C, Structure Of Human O-Glcnac Transferase And Its Complex
With A Peptide Substrate
pdb|3TAX|A Chain A, A Neutral Diphosphate Mimic Crosslinks The Active Site Of
Human O- Glcnac Transferase
pdb|3TAX|C Chain C, A Neutral Diphosphate Mimic Crosslinks The Active Site Of
Human O- Glcnac Transferase
pdb|4AY5|A Chain A, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|B Chain B, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|C Chain C, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY5|D Chain D, Human O-Glcnac Transferase (Ogt) In Complex With Udp And
Glycopeptide
pdb|4AY6|A Chain A, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|B Chain B, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|C Chain C, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4AY6|D Chain D, Human O-Glcnac Transferase (Ogt) In Complex With
Udp-5sglcnac And Substrate Peptide
pdb|4GYW|A Chain A, Crystal Structure Of Human O-Glcnac Transferase In Complex
With Udp And A Glycopeptide
pdb|4GYW|C Chain C, Crystal Structure Of Human O-Glcnac Transferase In Complex
With Udp And A Glycopeptide
pdb|4GYY|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac And A Peptide Substrate
pdb|4GYY|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac And A Peptide Substrate
pdb|4GZ3|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With Udp
And A Thioglycopeptide
pdb|4GZ3|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With Udp
And A Thioglycopeptide
pdb|4GZ5|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|B Chain B, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ5|D Chain D, Crystal Structure Of Human O-Glcnac Transferase With
Udp-Glcnac
pdb|4GZ6|A Chain A, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|B Chain B, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|C Chain C, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
pdb|4GZ6|D Chain D, Crystal Structure Of Human O-Glcnac Transferase With
Udp-5sglcnac
Length = 723
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Query: 715 PLDGSVYNALLSGCCKEEKLEQALELFRDMLEKGLASTLSFNTLIEFLCISNKLQEAHQL 774
P N L + ++ +E+A+ L+R LE + + L L KLQEA L
Sbjct: 6 PTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEA--L 63
Query: 775 LDAMLEEQVNPN-HDTYTTLINQYCKVQNMEKAKQLFLEMQQRNLKPA-TITYRSLLNGY 832
+ +++P D Y+ + N ++Q+++ A Q + Q N PA + +L + +
Sbjct: 64 MHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQIN--PAFADAHSNLASIH 121
Query: 833 NRMGNRSEVFVVFEEMLGKGIEPDNFTYYVMIDAHC 868
GN E + L ++PD Y + AHC
Sbjct: 122 KDSGNIPEAIASYRTAL--KLKPDFPDAYCNL-AHC 154
>pdb|3GIZ|H Chain H, Crystal Structure Of The Fab Fragment Of Anti-Cd20
Antibody Ofatumumab
Length = 222
Score = 30.8 bits (68), Expect = 3.6, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 923 FRLGFASCRTVANDFLREGVMDYAAKVLECMASFGWVSNSISLADIVKG 971
RL A+ ND+ V K LE +++ W S SI AD VKG
Sbjct: 18 LRLSCAASGFTFNDYAMHWVRQAPGKGLEWVSTISWNSGSIGYADSVKG 66
>pdb|1UF2|A Chain A, The Atomic Structure Of Rice Dwarf Virus (Rdv)
pdb|1UF2|B Chain B, The Atomic Structure Of Rice Dwarf Virus (Rdv)
Length = 1019
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 465 ITRGLKPNAIIYTNLVSTYFKKNKLQEAGKLV 496
I L P ++ TNL+ TYF+ N Q+A +++
Sbjct: 458 IYNNLLPGELVLTNLIQTYFRGNTAQQAAEIL 489
>pdb|1DFB|H Chain H, Structure Of A Human Monoclonal Antibody Fab Fragment
Against Gp41 Of Human Immunodeficiency Virus Type I
Length = 229
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%)
Query: 923 FRLGFASCRTVANDFLREGVMDYAAKVLECMASFGWVSNSISLADIVKG 971
RL A+ ND+ V K LE ++ W S+SI AD VKG
Sbjct: 18 LRLSCAASGFTFNDYAMHWVRQAPGKGLEWVSGISWDSSSIGYADSVKG 66
>pdb|1CP2|A Chain A, Nitrogenase Iron Protein From Clostridium Pasteurianum
pdb|1CP2|B Chain B, Nitrogenase Iron Protein From Clostridium Pasteurianum
Length = 269
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 39/189 (20%)
Query: 258 GCRPNVATYNVVIGGLCRVGFVDEAVELKNSMVEKGLVPDSYTYVNLIY------GFSAA 311
GC P + +++GGL + +D E + ++ + Y + + G A
Sbjct: 36 GCDPKADSTRLLLGGLAQKSVLDTLREEGEDVELDSILKEGYGGIRCVESGGPEPGVGCA 95
Query: 312 KRLGDVRLVLSELIGKGLK-LDTVAYYALID----GF---VKQGDVEEAFRVKDELVASG 363
R + + E +G LD V Y L D GF +++G +E + +VASG
Sbjct: 96 GRGIITSINMLEQLGAYTDDLDYVFYDVLGDVVCGGFAMPIREGKAQEIY-----IVASG 150
Query: 364 NQIDLVIYNTLLKGFCKSGKMEKAREVLNEIIRMGIEPNSRTYTSLIQGYCRMRKMVSAF 423
+ L N + KG K K R L II C RK+ + +
Sbjct: 151 EMMALYAANNISKGIQKYAKSGGVR--LGGII------------------CNSRKVANEY 190
Query: 424 ELLDEMKKK 432
ELLD K+
Sbjct: 191 ELLDAFAKE 199
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,919,649
Number of Sequences: 62578
Number of extensions: 1170658
Number of successful extensions: 2714
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2673
Number of HSP's gapped (non-prelim): 35
length of query: 989
length of database: 14,973,337
effective HSP length: 108
effective length of query: 881
effective length of database: 8,214,913
effective search space: 7237338353
effective search space used: 7237338353
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)