BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 001969
         (989 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
 gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
          Length = 1113

 Score = 1373 bits (3553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 776/1008 (76%), Positives = 849/1008 (84%), Gaps = 21/1008 (2%)

Query: 1    MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
            MK+PAN A AA  +GEG   EKK+IN ELW ACAGPLVNLPAAGTHVVYFPQGHSEQVAA
Sbjct: 1    MKSPANGAAAAVTNGEGV--EKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAA 58

Query: 61   SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
            S+KKD++ QIPNYPNLPSKLLC+L NVTLHAD ETDEVY QMTLQPV S+D++ALLRSDL
Sbjct: 59   SLKKDVNAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYVQMTLQPVSSFDKDALLRSDL 118

Query: 121  ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEK FPPLDFSMQPPAQEL+ARDLHDN
Sbjct: 119  ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKTFPPLDFSMQPPAQELVARDLHDN 178

Query: 181  IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            +WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLF+RDEKQQLLLGIRRANRQP NL
Sbjct: 179  VWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNL 238

Query: 241  SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
            SSSVLSSDSMHIGILAAAAHAAANNSPFTV+YNPRASPSEFV+PLAKYYKAV+SNQISLG
Sbjct: 239  SSSVLSSDSMHIGILAAAAHAAANNSPFTVYYNPRASPSEFVIPLAKYYKAVYSNQISLG 298

Query: 301  MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
            MRFRMMFETEESGTRR+MGTITGISDLD VRWKNSQWRNLQVGWDESTAGE+RNRVSIWE
Sbjct: 299  MRFRMMFETEESGTRRHMGTITGISDLDAVRWKNSQWRNLQVGWDESTAGERRNRVSIWE 358

Query: 361  IEPVTAPFFICPPPFFRSKHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGL 417
            IEPVTAPFFICPPPFFRSKHPRQ    DDD++D D++FKRTMPW+GDD  +KD Q LPGL
Sbjct: 359  IEPVTAPFFICPPPFFRSKHPRQPGMPDDDSTDFDSLFKRTMPWLGDDIYMKDPQVLPGL 418

Query: 418  SLVQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGG-LS--------QMPQQNNLQYTG 468
            SL Q MNMQQNPSLAN+MQ +YM SL GS+LQNL GG LS        QMPQ NNLQ+  
Sbjct: 419  SLAQRMNMQQNPSLANSMQPNYMQSLSGSVLQNLPGGDLSRQLGLSSPQMPQPNNLQFNA 478

Query: 469  QSLPQQVPQIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQ 528
            Q LPQQ  Q+DQL KL S +NPLGS I  QQ +GDI+QQSRQNM+ Q LPS  VQAQ+LQ
Sbjct: 479  QRLPQQAQQLDQLPKLQSLLNPLGSIIQSQQQMGDITQQSRQNMMAQTLPSSQVQAQLLQ 538

Query: 529  PQNLVQTSNILQQQPSIQNPQLPANLPQNLQ--QQQQQQHIMGQNQQQNLMQTQLPDPIN 586
            PQ L QT+NILQQQPSIQ+ QL  NLPQ L   QQ QQQHIMGQNQQQ+LMQ+QL D +N
Sbjct: 539  PQTLAQTNNILQQQPSIQSHQLLRNLPQTLHQQQQNQQQHIMGQNQQQSLMQSQLSDQVN 598

Query: 587  QNLQMSDKQIQLHLLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGT 646
            Q++QMSD QIQ  L+QKLQQQ+QS+ +QQSA+ Q  QL QLQD QRQLLDASQSFSRS T
Sbjct: 599  QHMQMSDNQIQSQLMQKLQQQQQSVSAQQSAMHQAGQLGQLQDSQRQLLDASQSFSRSMT 658

Query: 647  PTQMLEMHQVTPTSLPQSNIMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGI--LPQMPG 704
            P+QMLE+ Q TPTSLPQ N + QQ+  + +  N +FS  PQQ K +QQ  GI  L +M G
Sbjct: 659  PSQMLEIPQTTPTSLPQPNTIPQQMTKNNNQTNTRFSHLPQQLKPQQQHSGIMLLSEMAG 718

Query: 705  HMGLPASHIINPVSTAGNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRT 764
            HMGLP S + N +STAG+S LT AAG GQS ITDD PSCSTSPSTNNC  ++QP IN   
Sbjct: 719  HMGLPPSSMANQLSTAGSSILTAAAGPGQSGITDDVPSCSTSPSTNNCPNIVQPMINGWA 778

Query: 765  HRSAGIGEEVAQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQ 824
            HRS  +GE++AQSA  L +PSALET+ SN NLVKDL  KS+VKPS+NISK QN G F+ Q
Sbjct: 779  HRSTAMGEDMAQSAVTLFSPSALETVSSNGNLVKDLLQKSEVKPSLNISKNQNPGLFSSQ 838

Query: 825  TYLNGAATQTDYLDTSSSTTSVCLSQNDVHLQQ-NNSLSYNPQST-LRDASQDGEVPVDP 882
            TYLNG A Q DYLDTSSSTTSVCLSQNDVHLQQ NNSLSYNPQS  LRDAS DGE+  DP
Sbjct: 839  TYLNGVAAQIDYLDTSSSTTSVCLSQNDVHLQQNNNSLSYNPQSVLLRDASHDGELQGDP 898

Query: 883  RSNIPYGANIDGPLGS-MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSS 941
            R+NI YG NID  L   +N D LLTKGMMGLGKDFSNN SSG ML N ENSKD QQELSS
Sbjct: 899  RNNILYGTNIDSQLVMPINSDHLLTKGMMGLGKDFSNNFSSGGMLTNCENSKDPQQELSS 958

Query: 942  SIVSQSFGVPDMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            +IVS+SFGVPDM FNSIDSTINDSS LN G WAPP Q  QRMRTYTKV
Sbjct: 959  AIVSKSFGVPDMPFNSIDSTINDSSLLNRGSWAPPQQQFQRMRTYTKV 1006


>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
 gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
          Length = 1109

 Score = 1303 bits (3372), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 733/986 (74%), Positives = 822/986 (83%), Gaps = 24/986 (2%)

Query: 19   GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
            G EKK+IN ELW ACAGPLV+LPAAGTHVVYFPQGHSEQVAASMKKD+D QIPNYPNLPS
Sbjct: 26   GVEKKSINQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPS 85

Query: 79   KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
            KL C+L NVTLHAD ETDEVYAQMTLQPVPS+D++ALLRSDL LKSNKPQT+FFCKTLTA
Sbjct: 86   KLFCLLHNVTLHADPETDEVYAQMTLQPVPSFDKDALLRSDLTLKSNKPQTDFFCKTLTA 145

Query: 139  SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
            SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+ARDLHDNIWTFRHIYRGQPKRHLLT
Sbjct: 146  SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLLT 205

Query: 199  TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
            TGWSLFVSGKRLFAGDSVLFIRD+KQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA
Sbjct: 206  TGWSLFVSGKRLFAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 265

Query: 259  AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
            AHAAANNSPFTVFYNPRASPSEFV+PLAKYYKAV SNQISLGMRFRMMFETEESGTRRYM
Sbjct: 266  AHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESGTRRYM 325

Query: 319  GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
            GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS
Sbjct: 326  GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 385

Query: 379  KHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAM 435
            K PRQ    DDD+ DLD++FK+TMPW+GDD  +KD QSLPGLSL+QWMN+QQNPSLAN+M
Sbjct: 386  KRPRQPGMPDDDSPDLDSIFKKTMPWLGDDIYMKDPQSLPGLSLMQWMNLQQNPSLANSM 445

Query: 436  QSSYMHSLPGSILQNLNG-------GLS--QMPQQNNLQYTGQSLPQQVPQIDQLAKLPS 486
            Q +YM SL GS+LQNL G       G S  Q+PQ NNLQ+  Q LPQQ   +DQL KL S
Sbjct: 446  QPNYMQSLSGSVLQNLAGADLSRQLGFSAPQLPQSNNLQFNAQRLPQQAQLLDQLPKLQS 505

Query: 487  TVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSIQ 546
             +NPLG+ I  QQ LGD SQQSRQN+ TQN+PS  VQAQ+LQPQ LVQ +N+LQQQPS++
Sbjct: 506  LLNPLGTIIQSQQQLGDTSQQSRQNLATQNIPSSQVQAQILQPQTLVQNTNMLQQQPSLK 565

Query: 547  NPQLPANLP--QNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLLQKL 604
            + QLP N P     QQQ QQQHIMGQNQQ N++Q+QLPD ++Q+LQMSD Q Q H L + 
Sbjct: 566  SHQLPRNHPQSMQQQQQSQQQHIMGQNQQPNVIQSQLPDQVSQHLQMSDNQYQ-HQLLQK 624

Query: 605  QQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSLPQS 664
             QQ+Q  L    +LQQP+Q +QLQD QRQLL+ASQ+FSR   P Q+ EM Q TPTSLPQS
Sbjct: 625  LQQQQQSLLALQSLQQPSQFMQLQDPQRQLLEASQTFSRPTLPNQLPEMPQTTPTSLPQS 684

Query: 665  NIMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHIINPVSTAGNSA 724
            NI  Q   NS S  + +FSQ PQQ K  QQQPGIL +M G MGLP S  IN  STAG+S 
Sbjct: 685  NIQQQMTKNS-SQTSGRFSQLPQQLKF-QQQPGILSEMAGDMGLPPSSAINQHSTAGSSI 742

Query: 725  LTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNP 784
            L  AAG G S +T++ PSCSTSPSTNN    +QP ++S  H+S  +GE++AQSA+ LL+P
Sbjct: 743  LCAAAGAGLSGVTEEVPSCSTSPSTNNFANAVQPMMSSLAHQSTTLGEDMAQSAATLLSP 802

Query: 785  SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
             ALE +  NAN++KD+  KSD+KPS+N++K QNQGFFTPQTYLN A  QTD+LDTSSSTT
Sbjct: 803  GALEPISCNANIIKDIQQKSDIKPSLNMTKHQNQGFFTPQTYLNAATVQTDFLDTSSSTT 862

Query: 845  SVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANIDGPLG-SMNPDP 903
            SVC     V    N+S        LRD +QDGE+P DPR+N+PYG+N+ G +G S+N D 
Sbjct: 863  SVC-----VSQNNNSSSCNPQSMLLRDTNQDGELPADPRNNVPYGSNVGGQVGVSLNSDH 917

Query: 904  LLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSIDSTIN 963
             LTKG++GLGKDFSNN+SSG MLAN EN+KD Q ELSSS+VSQSFGVPDMAFNSIDSTIN
Sbjct: 918  GLTKGIVGLGKDFSNNLSSGGMLANCENAKDPQNELSSSMVSQSFGVPDMAFNSIDSTIN 977

Query: 964  DSSFLNGGPWAPPPQFPQRMRTYTKV 989
            DSSF+N GPWAPPPQF QRMRTYTKV
Sbjct: 978  DSSFMNRGPWAPPPQF-QRMRTYTKV 1002


>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
          Length = 1099

 Score = 1286 bits (3328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 712/998 (71%), Positives = 813/998 (81%), Gaps = 27/998 (2%)

Query: 7   TAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI 66
           T G  S+   G   E++ IN ELW ACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK+D+
Sbjct: 7   TDGCLSDDA-GEAPERRHINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKRDV 65

Query: 67  DGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNK 126
           D QIPNYPNLPSKLLC+L NVTLHAD ETDEVYAQMTLQPV S+D+EALLRSDL+LKSNK
Sbjct: 66  DAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVSSFDKEALLRSDLSLKSNK 125

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
           PQ EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQ PAQEL+ARDLH+N+W FRH
Sbjct: 126 PQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQTPAQELVARDLHENVWKFRH 185

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRG+PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDE QQLLLGIRRANRQPANLSSSVLS
Sbjct: 186 IYRGKPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDETQQLLLGIRRANRQPANLSSSVLS 245

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           SDSMHIGILAAAAHAAANNSPFTVFYNPRAS SEFV+PLAKYYKAV+++QIS GMRFRMM
Sbjct: 246 SDSMHIGILAAAAHAAANNSPFTVFYNPRASLSEFVIPLAKYYKAVYNHQISPGMRFRMM 305

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FETEESGTRRYMGTITGISD+DPVRWKNSQWRNLQVGWDESTAGE+RNRVSIWEIEPVTA
Sbjct: 306 FETEESGTRRYMGTITGISDIDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTA 365

Query: 367 PFFICPPPFFRSKHPRQAD---DDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWM 423
           PFFICP P FRSK PRQ     D+ SDLDN+FKR MPW+GDD  +KDS + PGLSLVQWM
Sbjct: 366 PFFICPSPLFRSKRPRQPGMLADEYSDLDNLFKRPMPWLGDDICLKDSDAHPGLSLVQWM 425

Query: 424 NMQQNPSLANAMQSSYMHSLPGSILQNLNG-------GLS--QMPQQNNLQYTGQSLPQQ 474
           NMQQNP LAN+MQ ++M SL GS +QN +G       GLS  QMPQ NNLQ+    LPQ+
Sbjct: 426 NMQQNPLLANSMQPNFMQSLAGSTMQNFDGADLSHQMGLSAPQMPQPNNLQFNAHRLPQK 485

Query: 475 VPQIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQ 534
           V Q+DQ+ KLPST+N LGS I PQQ L D++QQSRQN++ Q LPS    +QVLQPQ LV+
Sbjct: 486 VQQLDQVPKLPSTMNSLGSIIQPQQ-LNDMTQQSRQNLVAQTLPS----SQVLQPQALVR 540

Query: 535 TSNIL-QQQPSIQNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSD 593
           ++NIL QQQ S    QLP +       QQQQQ+++G N  QNLM +QLPDP+NQ+LQ+ D
Sbjct: 541 SNNILHQQQTSNPTHQLPLS--LPQNLQQQQQYLVGPNHPQNLMHSQLPDPLNQHLQVPD 598

Query: 594 KQIQLHLLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEM 653
            Q+Q  L+QKLQQQ+Q LL+QQSALQQP  L Q QDQQRQLLDASQSFS S T +Q+LEM
Sbjct: 599 NQVQFQLMQKLQQQQQLLLAQQSALQQPGLLAQPQDQQRQLLDASQSFSSSVTASQVLEM 658

Query: 654 HQVTPTSLPQSNIMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHI 713
            Q  PT LPQSN+  QQ+  + S  NV FSQPP Q K++QQQ G+LP++PG +G   +  
Sbjct: 659 PQNIPTLLPQSNVAPQQMPKNNSQANVWFSQPPLQSKVQQQQTGMLPEVPGLVGPFQTTA 718

Query: 714 INPVSTAGNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEE 773
            N  STA +S +T AA    SVITDDNPSCSTSPST NC  ++QP I+SR HRSAG+G++
Sbjct: 719 TNQFSTAVSSVMTSAAVAAPSVITDDNPSCSTSPST-NCPSVLQPMIDSRVHRSAGLGDD 777

Query: 774 VAQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQ 833
           ++QSA+ +LNP+ALETM + AN+VK+   KS VKP +NISK+QNQG F PQ  +NGA   
Sbjct: 778 ISQSAATVLNPNALETMSTKANMVKEQQQKS-VKPLLNISKSQNQGSFAPQNCINGATAH 836

Query: 834 TDYLDTSSSTTSVCLSQNDVHLQQNNSLSYNPQST-LRDASQDGEVPVDPRSNIPYGANI 892
            D LDTSSSTTSVCLSQ+D HL Q N+LSYNPQ+  LRD SQ+GEV   PR+N+ YG N+
Sbjct: 837 ADCLDTSSSTTSVCLSQSDAHLHQ-NTLSYNPQTMLLRDTSQEGEVRAYPRNNVSYGNNM 895

Query: 893 DGPLGS-MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVP 951
           D  +   MN D L  KGMMGLGKDFSN++SSG +LA+YEN KDAQQELSSS+VSQ + VP
Sbjct: 896 DSQIEMPMNSDTLSAKGMMGLGKDFSNHLSSGGILASYENPKDAQQELSSSMVSQPYRVP 955

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           DMAFNSID TIN SSF+N   W PP QF QR+RTYTKV
Sbjct: 956 DMAFNSIDPTINHSSFINRNAWTPPSQF-QRLRTYTKV 992


>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
          Length = 1117

 Score = 1270 bits (3286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 759/993 (76%), Positives = 841/993 (84%), Gaps = 24/993 (2%)

Query: 18   GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
            G GEKK+IN ELW ACAGPLVNLP AGT VVYFPQGHSEQVAASMKKD+D QIPNYPNLP
Sbjct: 21   GKGEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLP 80

Query: 78   SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            S+LLCIL NVTLHAD ETDEVYAQMTLQPVP+YD+E+LLRSDLALK+NKPQT+FFCKTLT
Sbjct: 81   SRLLCILHNVTLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLT 140

Query: 138  ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+A+DLHDN+WTFRHIYRGQPKRHLL
Sbjct: 141  ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 200

Query: 198  TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
            TTGWSLFVSGKRLFAGD+VLFIRDEKQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAA
Sbjct: 201  TTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 260

Query: 258  AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            AAHAAANNSPFTVFYNPRASPSEFV+PLAKYYKA +SNQISLGMRFRMMFETEESGTRRY
Sbjct: 261  AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRY 320

Query: 318  MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGE+RNRVSIWEIEPVTAPFFICPPPFFR
Sbjct: 321  MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFR 380

Query: 378  SKHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANA 434
            SK PRQ    DD++SDL+N+FKRTMPW+GDD  +KD Q++ GLSLVQWMNMQQNP L N+
Sbjct: 381  SKRPRQPGMPDDESSDLENLFKRTMPWLGDDICMKDPQAVHGLSLVQWMNMQQNPPLGNS 440

Query: 435  MQSSYMHSLPGSILQNLNG-------GLS--QMPQQNNLQY-TGQSLPQQVPQIDQLAKL 484
             Q +YMHSL GS++QNL G       GLS  Q+PQQ+NLQ+   Q  PQQVPQ+DQL KL
Sbjct: 441  AQPNYMHSLSGSVMQNLAGADLSRQLGLSAPQIPQQSNLQFNNAQRPPQQVPQLDQLTKL 500

Query: 485  PSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTS-NILQQQP 543
            P+T+NPLGS I PQQ L DI+QQ RQN++ Q LPS  VQAQ+LQ    +  + NILQQQP
Sbjct: 501  PATLNPLGSVIQPQQQLNDIAQQPRQNLMNQTLPSSQVQAQLLQQPQALVQNHNILQQQP 560

Query: 544  SIQNPQLPANLP----QNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLH 599
            S+QN QL  NLP    Q  Q QQQQQ IMGQNQQQNLM +Q PD  NQ LQMSD QIQL 
Sbjct: 561  SVQNQQLHRNLPQNLQQQQQPQQQQQQIMGQNQQQNLMPSQPPDQANQQLQMSDNQIQLQ 620

Query: 600  LLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPT 659
            LLQKLQQQ+QSLL+QQS +QQ AQL QLQD QRQLLD SQ+FSRS    Q+LEM Q T T
Sbjct: 621  LLQKLQQQQQSLLAQQSTMQQTAQLTQLQDPQRQLLDVSQNFSRSVASGQILEMPQATST 680

Query: 660  SLPQSNIMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHIINPVST 719
            SLPQS ++ QQI  S S  NV+FS PPQQPKL+QQQPG+LP++PGH+ LP     N +ST
Sbjct: 681  SLPQSLVIPQQITKSNSQTNVRFSHPPQQPKLQQQQPGMLPELPGHVVLPPMTATNQLST 740

Query: 720  AGNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSAS 779
            AG+S LTGAAG GQS ITDD PSCSTSPSTNNC  +IQP +N R HR+  + EE+AQS++
Sbjct: 741  AGSSLLTGAAGAGQSGITDDVPSCSTSPSTNNCPNVIQPILNGRAHRTTAM-EEMAQSSA 799

Query: 780  ALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDT 839
             LL+ S LET+ +NANLVKD   K D+KPS+NISK+ NQGFF PQTY+N AA QTDYLDT
Sbjct: 800  TLLSGSGLETISANANLVKDFQQKPDIKPSLNISKSHNQGFFAPQTYVNVAAVQTDYLDT 859

Query: 840  SSSTTSVCLSQNDVHLQQNNS-LSYN-PQSTLRDASQDGEVPVDPRSNIPYGANIDGPLG 897
            SSS TSVCLSQND HLQQNN+ LS+N P    RD SQD E   DPR+N+ +G NID  LG
Sbjct: 860  SSSATSVCLSQND-HLQQNNNPLSFNQPSMMFRDTSQDREAQADPRNNVQFGTNIDSQLG 918

Query: 898  -SMNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFN 956
              M PDP+L+KGM+G GK+FSNN+SSG +LANYEN KDAQQ+LSSSIVSQSFGVPDMAFN
Sbjct: 919  IPMLPDPILSKGMVGSGKEFSNNLSSGGLLANYENPKDAQQDLSSSIVSQSFGVPDMAFN 978

Query: 957  SIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            SIDS INDSSFLN GPWAP PQF QRMRTYTKV
Sbjct: 979  SIDSAINDSSFLNRGPWAPAPQF-QRMRTYTKV 1010


>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
          Length = 1107

 Score = 1235 bits (3196), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 693/991 (69%), Positives = 788/991 (79%), Gaps = 29/991 (2%)

Query: 18   GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
            GG EKK IN ELW ACAGPLVNLP AG HVVYFPQGHSEQVAAS++KD+DGQ+PNYP+L 
Sbjct: 20   GGLEKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLA 79

Query: 78   SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            SKLLC+L NVTLHAD ETDEVYAQMTL PVPS+D++ALLRSDLALKSNKPQ EFFCKTLT
Sbjct: 80   SKLLCLLHNVTLHADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLT 139

Query: 138  ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+A+DLHDN+WTFRHIYRGQPKRHLL
Sbjct: 140  ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 199

Query: 198  TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
            TTGWSLFVSGKRL AGDSVLFIRDEKQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAA
Sbjct: 200  TTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 259

Query: 258  AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            AAHAAANNSPFTVFYNPRASPSEFV+PLAKYYKAV +NQISLGMRFRMMFETEESGTRRY
Sbjct: 260  AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRY 319

Query: 318  MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            MGTITGISDLDPVRWK SQWRNLQVGWDEST GE+RNRVS+WEIEPV APFFICPPPF R
Sbjct: 320  MGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPFLR 379

Query: 378  SKHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANA 434
            SK PRQ    DDD+SDLD +FKRTM   GDDF +KD Q  PGL+LVQWMNM QNPSL+N+
Sbjct: 380  SKRPRQPGMPDDDSSDLDGIFKRTM--FGDDFCMKDPQGYPGLNLVQWMNM-QNPSLSNS 436

Query: 435  MQSSYMHSLPGSILQNLNG-------GLS--QMPQQNNLQYTGQSLPQQVPQIDQLAKLP 485
            MQ +YMHS  GS+L NL         GLS  Q+PQ NN+Q+  Q L  Q  Q+DQL KLP
Sbjct: 437  MQQNYMHSFSGSMLPNLGSVDISRQLGLSNAQLPQSNNIQFNAQRLLSQAQQLDQLPKLP 496

Query: 486  STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSI 545
            +++N LGS + P Q L D+SQQ+RQN+I QN  S  +QAQ++Q  +   T+ ILQQQ ++
Sbjct: 497  TSMNSLGSVVQPPQQLDDMSQQTRQNLINQNAVSSQIQAQIMQQPH---TNGILQQQTAL 553

Query: 546  QNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLLQKLQ 605
            QN QL  N PQNLQ QQ QQ +  QNQQQN+  +   + +N  LQMSD Q+ + +LQK Q
Sbjct: 554  QNQQLQRNAPQNLQMQQHQQILS-QNQQQNMNPSPHLEQLNHQLQMSDNQVHIQMLQKFQ 612

Query: 606  QQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSLPQSN 665
            QQ QSLL+QQSAL QP+QL+QL DQQRQ +DASQSFSRS +  QML++ Q TP + P SN
Sbjct: 613  QQPQSLLAQQSAL-QPSQLVQLPDQQRQSVDASQSFSRSMSSNQMLDIPQSTPAAGPPSN 671

Query: 666  IMSQQIANSGSLNNVQFSQPPQQPKLEQ-QQPG---ILPQMPGHMGLPASHIINPVSTAG 721
             + QQ AN     N +FS    QPKL Q QQP    +L  M   MGLP + I N +S A 
Sbjct: 672  ALPQQAANCNGQTNNRFSNQHLQPKLPQLQQPASSTVLSDMSRPMGLPPAQINNQLSAAT 731

Query: 722  NSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASAL 781
            +S +TG AG GQS ITDD PSCSTSPSTNNC  L+QP  N R HR+ G+ E+VAQS + +
Sbjct: 732  SSLITGVAGAGQSGITDDIPSCSTSPSTNNCSSLVQPVANGRVHRTTGLVEDVAQSTATI 791

Query: 782  LNPSALETMPSNANLV-KDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTS 840
             + + L+ M  NANLV KDLP K+ VKPS+NISK Q+ G F  QT+L+G   QTD+LDTS
Sbjct: 792  FSSNTLDNMSPNANLVHKDLPQKTAVKPSLNISKNQSHGIFAQQTFLSGVVAQTDFLDTS 851

Query: 841  SSTTSVCLSQNDVHLQQNNSLSYNPQSTL-RDASQDGEVPVDPRSNIPYGANIDGPL-GS 898
            SSTTS CLSQND  LQQNN +S+N Q  L +D SQD EVP D   NIPYG ++DG +   
Sbjct: 852  SSTTSACLSQNDAQLQQNNMMSFNSQPMLFKDNSQDLEVPTD-LHNIPYGNHVDGQMVAQ 910

Query: 899  MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSI 958
            ++ DPLL KG+ GLGKDFSNN SSGAML  Y+  KD QQE+SSSIVSQSFG+PDM FNS+
Sbjct: 911  LSSDPLLDKGIGGLGKDFSNNFSSGAMLTTYDAQKDPQQEISSSIVSQSFGIPDMTFNSM 970

Query: 959  DSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            DSTIND++FLN   WAPPP F QRMRTYTKV
Sbjct: 971  DSTINDNTFLNRNQWAPPPPF-QRMRTYTKV 1000


>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
          Length = 1107

 Score = 1231 bits (3186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/991 (69%), Positives = 787/991 (79%), Gaps = 29/991 (2%)

Query: 18   GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
            GG EKK IN ELW ACAGPLVNLP AG HVVYFPQGHSEQVAAS++KD+DGQ+PNYP+L 
Sbjct: 20   GGLEKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLA 79

Query: 78   SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            SKLLC+L NVTLHAD ETDEVYAQMTL PV S+D++ALLRSDLALKSNKPQ EFFCKTLT
Sbjct: 80   SKLLCLLHNVTLHADPETDEVYAQMTLLPVLSFDKDALLRSDLALKSNKPQPEFFCKTLT 139

Query: 138  ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+A+DLHDN+WTFRHIYRGQPKRHLL
Sbjct: 140  ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 199

Query: 198  TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
            TTGWSLFVSGKRL AGDSVLFIRDEKQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAA
Sbjct: 200  TTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 259

Query: 258  AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            AAHAAANNSPFTVFYNPRASPSEFV+PLAKYYKAV +NQISLGMRFRMMFETEESGTRRY
Sbjct: 260  AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRY 319

Query: 318  MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            MGTITGISDLDPVRWK SQWRNLQVGWDEST GE+RNRVS+WEIEPV APFFICPPPF R
Sbjct: 320  MGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPFLR 379

Query: 378  SKHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANA 434
            SK PRQ    DDD+SDLD +FKRTM   GDDF +KD Q  PGL+LVQWMNM QNPSL+N+
Sbjct: 380  SKRPRQPGMPDDDSSDLDGIFKRTM--FGDDFCMKDPQGYPGLNLVQWMNM-QNPSLSNS 436

Query: 435  MQSSYMHSLPGSILQNLNG-------GLS--QMPQQNNLQYTGQSLPQQVPQIDQLAKLP 485
            MQ +YMHS  GS+L NL         GLS  Q+PQ NN+Q+  Q L  Q  Q+DQL KLP
Sbjct: 437  MQQNYMHSFSGSMLPNLGSVDISRQLGLSNAQLPQSNNIQFNAQRLLSQAQQLDQLPKLP 496

Query: 486  STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSI 545
            +++N LGS + P Q L D+SQQ+RQN+I QN  S  +QAQ++Q  +   T+ ILQQQ ++
Sbjct: 497  TSMNSLGSVVQPPQQLDDMSQQTRQNLINQNAVSSQIQAQIMQQPH---TNGILQQQTAL 553

Query: 546  QNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLLQKLQ 605
            QN QL  N PQNLQ QQ QQ +  QNQQQN+  +   + +N  LQMSD Q+ + +LQK Q
Sbjct: 554  QNQQLQRNAPQNLQMQQHQQILS-QNQQQNMNPSPHLEQLNHQLQMSDNQVHIQMLQKFQ 612

Query: 606  QQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSLPQSN 665
            QQ QSLL+QQSAL QP+QL+QL DQQRQ +DASQSFSRS +  QML++ Q TP + P SN
Sbjct: 613  QQPQSLLAQQSAL-QPSQLVQLPDQQRQSVDASQSFSRSMSSNQMLDIPQSTPAAGPPSN 671

Query: 666  IMSQQIANSGSLNNVQFSQPPQQPKLEQ-QQPG---ILPQMPGHMGLPASHIINPVSTAG 721
             + QQ AN     N +FS    QPKL Q QQP    +L  M   MGLP + I N +S A 
Sbjct: 672  ALPQQAANCNGQTNNRFSNQHLQPKLPQLQQPASSTVLSDMSRPMGLPPAQINNQLSAAT 731

Query: 722  NSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASAL 781
            +S +TG AG GQS ITDD PSCSTSPSTNNC  L+QP  N R HR+ G+ E+VAQS + +
Sbjct: 732  SSLITGVAGAGQSGITDDIPSCSTSPSTNNCSSLVQPVANGRVHRTTGLVEDVAQSTATI 791

Query: 782  LNPSALETMPSNANLV-KDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTS 840
             + + L+ M  NANLV KDLP K+ VKPS+NISK Q+ G F  QT+L+G   QTD+LDTS
Sbjct: 792  FSSNTLDNMSPNANLVHKDLPQKTAVKPSLNISKNQSHGIFAQQTFLSGVVAQTDFLDTS 851

Query: 841  SSTTSVCLSQNDVHLQQNNSLSYNPQSTL-RDASQDGEVPVDPRSNIPYGANIDGPL-GS 898
            SSTTS CLSQND  LQQNN +S+N Q  L +D SQD EVP D   NIPYG ++DG +   
Sbjct: 852  SSTTSACLSQNDAQLQQNNMMSFNSQPMLFKDNSQDLEVPTD-LHNIPYGNHVDGQMVAQ 910

Query: 899  MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSI 958
            ++ DPLL KG+ GLGKDFSNN SSGAML  Y+  KD QQE+SSSIVSQSFG+PDM FNS+
Sbjct: 911  LSSDPLLDKGIGGLGKDFSNNFSSGAMLTTYDAQKDPQQEISSSIVSQSFGIPDMTFNSM 970

Query: 959  DSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            DSTIND++FLN   WAPPP F QRMRTYTKV
Sbjct: 971  DSTINDNTFLNRNQWAPPPPF-QRMRTYTKV 1000


>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
          Length = 1034

 Score = 1215 bits (3143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 710/978 (72%), Positives = 785/978 (80%), Gaps = 79/978 (8%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK+IN ELW ACAGPLVNLP AGT VVYFPQGHSEQVAASMKKD+D QIPNYPNLPS+
Sbjct: 21  GEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSR 80

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLCIL NVTLHAD ETDEVYAQMTLQPVP+YD+E+LLRSDLALK+NKPQT+FFCKTLTAS
Sbjct: 81  LLCILHNVTLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTAS 140

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+A+DLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 141 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLLTT 200

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEK-QQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           GWSLFVSGKRLFAGD+VLFIRDE  QQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAA
Sbjct: 201 GWSLFVSGKRLFAGDAVLFIRDE-KQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAA 259

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAANNSPFTVFYNPRASPSEFV+PLAKYYKA +SNQISLGMRFRMMFETEESGTRRYM
Sbjct: 260 AHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYM 319

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTITGISDLDPVRWKNSQWRNLQVGWDESTAGE+RNRVSIWEIEPVTAPFFICPPPFFRS
Sbjct: 320 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRS 379

Query: 379 KHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAM 435
           K PRQ    DD++SDL+N+FKRTMPW+GDD  +KD Q++ GLSLVQWMNMQQNP L N+ 
Sbjct: 380 KRPRQPGMPDDESSDLENLFKRTMPWLGDDICMKDPQAVHGLSLVQWMNMQQNPPLGNSA 439

Query: 436 QSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGSNI 495
           Q +YMHSL GS                               +DQL KLP+T+NPLGS I
Sbjct: 440 QPNYMHSLSGS-------------------------------LDQLTKLPATLNPLGSVI 468

Query: 496 LPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTS-NILQQQPSIQNPQLPANL 554
            PQQ L DI+QQ RQN++ Q LPS  VQAQ+LQ    +  + NILQQQPS          
Sbjct: 469 QPQQQLNDIAQQPRQNLMNQTLPSSQVQAQLLQQPQALVQNHNILQQQPSP--------- 519

Query: 555 PQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLLQKLQQQRQSLLSQ 614
                                      PD  NQ LQMSD QIQL LLQKLQQQ+QSLL+Q
Sbjct: 520 ---------------------------PDQANQQLQMSDNQIQLQLLQKLQQQQQSLLAQ 552

Query: 615 QSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSLPQSNIMSQQIANS 674
           QS +QQ AQL QLQD QRQLLD SQ+FSRS    Q+LEM Q T TSLPQS ++ QQI  S
Sbjct: 553 QSTMQQTAQLTQLQDPQRQLLDVSQNFSRSVASGQILEMPQATSTSLPQSLVIPQQITKS 612

Query: 675 GSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHIINPVSTAGNSALTGAAGVGQS 734
            S  NV+FS PPQQPKL+QQQPG+LP++PGH+ LP     N +STAG+S LTGAAG GQS
Sbjct: 613 NSQTNVRFSHPPQQPKLQQQQPGMLPELPGHVVLPPMTATNQLSTAGSSLLTGAAGAGQS 672

Query: 735 VITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNPSALETMPSNA 794
            ITDD PSCSTSPSTNNC  +IQP +N R HR+  + EE+AQS++ LL+ S LET+ +NA
Sbjct: 673 GITDDVPSCSTSPSTNNCPNVIQPILNGRAHRTTAM-EEMAQSSATLLSGSGLETISANA 731

Query: 795 NLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVCLSQNDVH 854
           NLVKD   K D+KPS+NISK+ NQGFF PQTY+N AA QTDYLDTSSS TSVCLSQND H
Sbjct: 732 NLVKDFQQKPDIKPSLNISKSHNQGFFAPQTYVNVAAVQTDYLDTSSSATSVCLSQND-H 790

Query: 855 LQQNNS-LSYN-PQSTLRDASQDGEVPVDPRSNIPYGANIDGPLG-SMNPDPLLTKGMMG 911
           LQQNN+ LS+N P    RD SQD E   DPR+N+ +G NID  LG  M PDP+L+KGM+G
Sbjct: 791 LQQNNNPLSFNQPSMMFRDTSQDREAQADPRNNVQFGTNIDSQLGIPMLPDPILSKGMVG 850

Query: 912 LGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSIDSTINDSSFLNGG 971
            GK+FSNN+SSG +LANYEN KDAQQ+LSSSIVSQSFGVPDMAFNSIDS INDSSFLN G
Sbjct: 851 SGKEFSNNLSSGGLLANYENPKDAQQDLSSSIVSQSFGVPDMAFNSIDSAINDSSFLNRG 910

Query: 972 PWAPPPQFPQRMRTYTKV 989
           PWAP PQF QRMRTYTKV
Sbjct: 911 PWAPAPQF-QRMRTYTKV 927


>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101205542
            [Cucumis sativus]
          Length = 1107

 Score = 1198 bits (3099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/991 (68%), Positives = 775/991 (78%), Gaps = 29/991 (2%)

Query: 18   GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
            GG EKK IN ELW ACAGPLVNLP AG HVVYFPQGHSEQVAAS++KD+DGQ+  Y    
Sbjct: 20   GGLEKKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVTIYLYHY 79

Query: 78   SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
                  L ++ L AD ETDEVYAQMTL PVPS+D++ALLRSDLALKSNKPQ EFFCKTLT
Sbjct: 80   YFAFLKLCSLYLXADPETDEVYAQMTLLPVPSFDKDALLRSDLALKSNKPQPEFFCKTLT 139

Query: 138  ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+A+DLHDN+WTFRHIYRGQPKRHLL
Sbjct: 140  ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 199

Query: 198  TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
            TTGWSLFVSGKRL AGDSVLFIRDEKQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAA
Sbjct: 200  TTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 259

Query: 258  AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            AAHAAANNSPFTVFYNPRASPSEFV+PLAKYYKAV +NQISLGMRFRMMFETEESGTRRY
Sbjct: 260  AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRY 319

Query: 318  MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            MGTITGISDLDPVRWK SQWRNLQVGWDEST GE+RNRVS+WEIEPV APFFICPPPF R
Sbjct: 320  MGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIEPVIAPFFICPPPFLR 379

Query: 378  SKHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANA 434
            SK PRQ    DDD+SDLD +FKRTM   GDDF +KD Q  PGL+LVQWMNM QNPSL+N+
Sbjct: 380  SKRPRQPGMPDDDSSDLDGIFKRTM--FGDDFCMKDPQGYPGLNLVQWMNM-QNPSLSNS 436

Query: 435  MQSSYMHSLPGSILQNLNG-------GLS--QMPQQNNLQYTGQSLPQQVPQIDQLAKLP 485
            MQ +YMHS  GS+L NL         GLS  Q+PQ NN+Q+  Q L  Q  Q+DQL KLP
Sbjct: 437  MQQNYMHSFSGSMLPNLGSVDISRQLGLSNAQLPQSNNIQFNAQRLLSQAQQLDQLPKLP 496

Query: 486  STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSI 545
            +++N LGS + P Q L D+SQQ+RQN+I QN  S  +QAQ++Q  +   T+ ILQQQ ++
Sbjct: 497  TSMNSLGSVVQPPQQLDDMSQQTRQNLINQNAVSSQIQAQIMQQPH---TNGILQQQTAL 553

Query: 546  QNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLLQKLQ 605
            QN QL  N PQNLQ QQ QQ +  QNQQQN+  +   + +N  LQMSD Q+ + +LQK Q
Sbjct: 554  QNQQLQRNAPQNLQMQQHQQILS-QNQQQNMNPSPHLEQLNHQLQMSDNQVHIQMLQKFQ 612

Query: 606  QQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSLPQSN 665
            QQ QSLL+QQSAL QP+QL+QL DQQRQ +DASQSFSRS +  QML++ Q TP + P SN
Sbjct: 613  QQPQSLLAQQSAL-QPSQLVQLPDQQRQSVDASQSFSRSMSSNQMLDIPQSTPAAGPPSN 671

Query: 666  IMSQQIANSGSLNNVQFSQPPQQPKLEQ-QQPG---ILPQMPGHMGLPASHIINPVSTAG 721
             + QQ AN     N +FS    QPKL Q QQP    +L  M   MGLP + I N +S A 
Sbjct: 672  ALPQQAANCNGQTNNRFSNQHLQPKLPQLQQPASSTVLSDMSRPMGLPPAQINNQLSAAT 731

Query: 722  NSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASAL 781
            +S +TG AG GQS ITDD PSCSTSPSTNNC  L+QP  N R HR+ G+ E+VAQS + +
Sbjct: 732  SSLITGVAGAGQSGITDDIPSCSTSPSTNNCSSLVQPVANGRVHRTTGLVEDVAQSTATI 791

Query: 782  LNPSALETMPSNANLV-KDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTS 840
             + + L+ M  NANLV KDLP K+ VKPS+NISK Q+ G F  QT+L+G   QTD+LDTS
Sbjct: 792  FSSNTLDNMSPNANLVHKDLPQKTAVKPSLNISKNQSHGIFAQQTFLSGVVAQTDFLDTS 851

Query: 841  SSTTSVCLSQNDVHLQQNNSLSYNPQSTL-RDASQDGEVPVDPRSNIPYGANIDGPL-GS 898
            SSTTS CLSQND  LQQNN +S+N Q  L +D SQD EVP D   NIPYG ++DG +   
Sbjct: 852  SSTTSACLSQNDAQLQQNNMMSFNSQPMLFKDNSQDLEVPTD-LHNIPYGNHVDGQMVAQ 910

Query: 899  MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSI 958
            ++ DPLL KG+ GLGKDFSNN SSGAML  Y+  KD QQE+SSSIVSQSFG+PDM FNS+
Sbjct: 911  LSSDPLLDKGIGGLGKDFSNNFSSGAMLTTYDAQKDPQQEISSSIVSQSFGIPDMTFNSM 970

Query: 959  DSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            DSTIND++FLN   WAPPP F QRMRTYTKV
Sbjct: 971  DSTINDNTFLNRNQWAPPPPF-QRMRTYTKV 1000


>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
 gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
 gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
          Length = 1112

 Score = 1196 bits (3093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 703/1014 (69%), Positives = 799/1014 (78%), Gaps = 33/1014 (3%)

Query: 1    MKTPANTAGA---ASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ 57
            MKTP NTAG     + +G  G  EKK+IN ELW ACAGPLVNLPAAGTHVVYFPQGHSEQ
Sbjct: 1    MKTPVNTAGVQQQHTVNGNPGEVEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQ 60

Query: 58   VAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLR 117
            VAASMKKD+D QIPNYPNLPSKL+C+L N+TLHAD E DEVYAQMTLQPVPS+D+EALLR
Sbjct: 61   VAASMKKDVDAQIPNYPNLPSKLVCLLHNITLHADPEADEVYAQMTLQPVPSFDKEALLR 120

Query: 118  SDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDL 177
            SDL++K+NKPQTEFFCKTLTASDTSTHGGFSVPRR+AEKIFPPLD+SMQPPAQEL+ARDL
Sbjct: 121  SDLSMKANKPQTEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQELVARDL 180

Query: 178  HDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP 237
            HDN+WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP
Sbjct: 181  HDNLWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP 240

Query: 238  ANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQI 297
             NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRAS SEFV+PLAKYYKA +S+Q+
Sbjct: 241  TNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASHSEFVIPLAKYYKATYSSQV 300

Query: 298  SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVS 357
            SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGE+RNRVS
Sbjct: 301  SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVS 360

Query: 358  IWEIEPVTAPFFICP-PPFFRSKHPR---QADDDASDLDNVFKRTMPWIGDDFGVKDSQS 413
            IWEIEPVTAPFFICP PPFFRSK PR     DDD SDLD +FKRTMPW+GDDFG+KD Q 
Sbjct: 361  IWEIEPVTAPFFICPTPPFFRSKRPRLPGMPDDDCSDLDGLFKRTMPWLGDDFGMKDPQG 420

Query: 414  LPGLSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGGLS----------QMPQQNN 463
            LPGLSLVQWMNMQQNPSLAN+MQ +Y+HSL GS+LQN+ GG            Q+PQQN 
Sbjct: 421  LPGLSLVQWMNMQQNPSLANSMQPNYLHSLSGSVLQNVGGGADLSRQLCLPAPQLPQQNT 480

Query: 464  LQYTGQSLPQQVPQIDQLAKLP-STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPV 522
            LQ+  Q   QQV Q+DQL K+P +T++P GS + PQQ L DISQQ RQN+I Q++P+  V
Sbjct: 481  LQFGSQRPTQQVQQLDQLQKIPTTTLSPAGSIMQPQQQLSDISQQPRQNLINQSVPTNHV 540

Query: 523  QAQVLQPQNLVQTSNILQQQPSIQNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLP 582
            QAQ+LQ Q+LVQ+ N+LQQQ S QN           Q   QQQ IM Q QQQ+ MQ Q  
Sbjct: 541  QAQLLQAQSLVQSQNVLQQQQSFQN----QLQRNLPQNLPQQQQIMNQTQQQSFMQPQPS 596

Query: 583  DPINQNLQMSDKQIQLHLLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFS 642
            DP+NQ L  SD Q+Q+ LLQKLQQQ              +QL+ +QDQQ+  LD SQ+FS
Sbjct: 597  DPLNQQLHFSDNQLQMQLLQKLQQQSLLAQQSLLQQP--SQLMPIQDQQKH-LDVSQNFS 653

Query: 643  RSGTPTQMLEMHQVT--PTSLPQSNIMSQQIANSGSLNNVQFSQPPQQPK--LEQQQPGI 698
            RS   +QML+M Q T   TSL Q  +  QQ+  + S +N++F+QP Q  K   +QQQPGI
Sbjct: 654  RSLATSQMLDMSQTTSNSTSLSQPQVAQQQMTINNSQSNLRFAQPNQHMKQQQQQQQPGI 713

Query: 699  LPQMPGHMGLPASHIINPVSTAGNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQP 758
            LP++PG +G       N +S   +S LTG  G GQSV+TDD PSCSTSPSTNNCQ ++QP
Sbjct: 714  LPEIPGQVGQILPPTTNQLSANCSSFLTGVVGGGQSVVTDDIPSCSTSPSTNNCQNVVQP 773

Query: 759  TINSRTHRSAGIGEEVAQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQ 818
             +N R HR     EE  QS+  LL+ S LE M  N NLVKDL  K DVKPS+NISK+QN 
Sbjct: 774  IMNGRIHRGTAAAEETTQSSLPLLSSSGLEAMSPNRNLVKDLQQKPDVKPSMNISKSQNH 833

Query: 819  GFFTPQTYLNGAATQTDYLDTSSSTTSVCLSQNDVHLQQ-NNSLSYNPQSTLRDASQDGE 877
            GF TPQTYLN A  Q DYLD+SSS TSV  SQNDV LQQ  N +S++ Q+ +   SQDGE
Sbjct: 834  GFSTPQTYLNNAVPQMDYLDSSSSATSVYFSQNDVQLQQTTNPMSFSSQAIVFRDSQDGE 893

Query: 878  VPVDPRSNIPYGANIDGPLG-SMNPDPLLTKGMMGLGKDFSNNISS-GAMLANYENSKDA 935
            V  DPR ++ +GAN+D  LG SM PD L+T  ++G  KD SNNISS G ML++YEN KDA
Sbjct: 894  VQGDPRHSVAFGANMDNQLGISMMPDSLITNSLVGSRKDVSNNISSGGGMLSSYENPKDA 953

Query: 936  QQELSSSIVSQSFGVPDMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            Q ELSSS+VSQSFGVPDMAFNSIDSTIN+ SF+N G WAPPPQ P RMRT+TKV
Sbjct: 954  QPELSSSMVSQSFGVPDMAFNSIDSTINEGSFMNRGAWAPPPQMP-RMRTFTKV 1006


>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
          Length = 1096

 Score = 1192 bits (3083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 729/990 (73%), Positives = 810/990 (81%), Gaps = 53/990 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK+IN ELW ACAGPLVNLP AGT VVYFPQGHSEQVAASMKKD+D QIPNYPNLPS+
Sbjct: 21  GEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSR 80

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLCIL NVTLHAD ETDEVYAQMTLQPVP+YD+E+LLRSDLALK+NKPQT+FFCKTLTAS
Sbjct: 81  LLCILHNVTLHADPETDEVYAQMTLQPVPAYDKESLLRSDLALKTNKPQTDFFCKTLTAS 140

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+A+DLHDN+WTFRHIYRG         
Sbjct: 141 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRG--------- 191

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
                               RDEKQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAAA
Sbjct: 192 --------------------RDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAA 231

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAANNSPFTVFYNPRASPSEFV+PLAKYYKA +SNQISLGMRFRMMFETEESGTRRYMG
Sbjct: 232 HAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESGTRRYMG 291

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TITGISDLDPVRWKNSQWRNLQVGWDESTAGE+RNRVSIWEIEPVTAPFFICPPPFFRSK
Sbjct: 292 TITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPPPFFRSK 351

Query: 380 HPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAMQ 436
            PRQ    DD++SDL+N+FKRTMPW+GDD  +KD Q++ GLSLVQWMNMQQNP L N+ Q
Sbjct: 352 RPRQPGMPDDESSDLENLFKRTMPWLGDDICMKDPQAVHGLSLVQWMNMQQNPPLGNSAQ 411

Query: 437 SSYMHSLPGSILQNLNG-------GLS--QMPQQNNLQY-TGQSLPQQVPQIDQLAKLPS 486
            +YMHSL GS++QNL G       GLS  Q+PQQ+NLQ+   Q  PQQVPQ+DQL KLP+
Sbjct: 412 PNYMHSLSGSVMQNLAGADLSRQLGLSAPQIPQQSNLQFNNAQRPPQQVPQLDQLTKLPA 471

Query: 487 TVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTS-NILQQQPSI 545
           T+NPLGS I PQQ L DI+QQ RQN++ Q LPS  VQAQ+LQ    +  + NILQQQPS+
Sbjct: 472 TLNPLGSVIQPQQQLNDIAQQPRQNLMNQTLPSSQVQAQLLQQPQALVQNHNILQQQPSV 531

Query: 546 QNPQLPANLP----QNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLL 601
           QN QL  NLP    Q  Q QQQQQ IMGQNQQQNLM +Q PD  NQ LQMSD QIQL LL
Sbjct: 532 QNQQLHRNLPQNLQQQQQPQQQQQQIMGQNQQQNLMPSQPPDQANQQLQMSDNQIQLQLL 591

Query: 602 QKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSL 661
           QKLQQQ+QSLL+QQS +QQ AQL QLQD QRQLLD SQ+FSRS    Q+LEM Q T TSL
Sbjct: 592 QKLQQQQQSLLAQQSTMQQTAQLTQLQDPQRQLLDVSQNFSRSVASGQILEMPQATSTSL 651

Query: 662 PQSNIMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHIINPVSTAG 721
           PQS ++ QQI  S S  NV+FS PPQQPKL+QQQPG+LP++PGH+ LP     N +STAG
Sbjct: 652 PQSLVIPQQITKSNSQTNVRFSHPPQQPKLQQQQPGMLPELPGHVXLPPMTATNQLSTAG 711

Query: 722 NSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASAL 781
           +S LTGAAG GQS ITDD PSCSTSPSTNNC  +IQP +N R HR+  + EE+AQS++ L
Sbjct: 712 SSLLTGAAGAGQSGITDDVPSCSTSPSTNNCPNVIQPILNGRAHRTTAM-EEMAQSSATL 770

Query: 782 LNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSS 841
           L+ S LET+ +NANLVKD   K D+KPS+NISK+ NQGFF PQTY+N AA QTDYLDTSS
Sbjct: 771 LSGSGLETISANANLVKDFQQKPDIKPSLNISKSHNQGFFAPQTYVNVAAVQTDYLDTSS 830

Query: 842 STTSVCLSQNDVHLQQNNS-LSYN-PQSTLRDASQDGEVPVDPRSNIPYGANIDGPLG-S 898
           S TSVCLSQND HLQQNN+ LS+N P    RD SQD E   DPR+N+ +G NID  LG  
Sbjct: 831 SATSVCLSQND-HLQQNNNPLSFNQPSMMFRDTSQDREAQADPRNNVQFGTNIDSQLGIP 889

Query: 899 MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSI 958
           M PDP+L+KGM+G GK+FSNN+SSG +LANYEN KDAQQ+LSSSIVSQSFGVPDMAFNSI
Sbjct: 890 MLPDPILSKGMVGSGKEFSNNLSSGGLLANYENPKDAQQDLSSSIVSQSFGVPDMAFNSI 949

Query: 959 DSTINDSSFLNGGPWAPPPQFPQRMRTYTK 988
           DS INDSSFLN GPWAP PQF QRMRTYTK
Sbjct: 950 DSAINDSSFLNRGPWAPAPQF-QRMRTYTK 978


>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1110

 Score = 1191 bits (3082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 696/993 (70%), Positives = 800/993 (80%), Gaps = 31/993 (3%)

Query: 21   EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
            +KK+IN ELW ACAGPLVNLP +GTHV+YFPQGHSEQVAAS+ KD   QIPNYPNLPSKL
Sbjct: 18   KKKSINPELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYPNLPSKL 77

Query: 81   LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
            LC+L N+TL AD ETDEVYAQ+TLQPVPS+D++ALLRSDLALKS+KPQ +FFCK LTASD
Sbjct: 78   LCLLHNLTLLADPETDEVYAQITLQPVPSFDKDALLRSDLALKSSKPQPDFFCKQLTASD 137

Query: 141  TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
            TSTHGGFSVPRRAA+KIFPPLD+SMQPPAQEL+ARDLHD +WTFRHIYRGQPKRHLLTTG
Sbjct: 138  TSTHGGFSVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKRHLLTTG 197

Query: 201  WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
            WSLFVSGKRL AGDSVLFIRDEKQ LLLGIRRANRQP N+SSSVLSSDSMHIGILAAAAH
Sbjct: 198  WSLFVSGKRLLAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAH 257

Query: 261  AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
            AAANNSPFTVFYNPR SPSEFV+PLAKYYK+V+S+Q SLGMRFRMMFETE+SGTRRYMGT
Sbjct: 258  AAANNSPFTVFYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRYMGT 317

Query: 321  ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKH 380
            ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKR+RVS+WEIEPVTAPFFICPPPFFRSK 
Sbjct: 318  ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVTAPFFICPPPFFRSKR 377

Query: 381  PRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAMQS 437
            PRQ    DD+ SD DN+FKRTMPW+GDD  +KD Q LPGLSL QWMNMQQNP+LAN++Q 
Sbjct: 378  PRQPGMPDDELSDFDNIFKRTMPWLGDDMCMKDPQGLPGLSLAQWMNMQQNPALANSLQP 437

Query: 438  SYMHSLPGSILQNLNG-------GLS--QMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTV 488
            +Y  SL GSILQN+ G       G S  Q+ Q +N+    Q L Q   Q+D L KLPST 
Sbjct: 438  NYAPSLSGSILQNIPGADISRQLGFSAPQISQSDNVALNTQRLLQTAQQLDHLQKLPSTS 497

Query: 489  NPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNIL-QQQPSIQN 547
            + LG+ +LPQQ LGDI+QQ RQN+  Q +P G VQ+Q+L PQN+VQT+NIL QQQPSIQN
Sbjct: 498  STLGTVLLPQQQLGDITQQPRQNLANQTIPQGQVQSQLLHPQNMVQTNNILQQQQPSIQN 557

Query: 548  PQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLLQKLQQQ 607
             QL  +L QN     QQQ  +GQNQ QNL+Q+ +PD + Q LQMSD QIQL LLQKLQQQ
Sbjct: 558  HQLHRSLSQN---PSQQQTTIGQNQPQNLIQSPMPDHV-QQLQMSDNQIQLQLLQKLQQQ 613

Query: 608  RQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSLPQSNIM 667
            +Q+LL+QQ+ALQQP QL Q+QDQQRQLLD + + SR+ TP Q+LE+  +   SLP++N +
Sbjct: 614  KQTLLAQQTALQQPTQLTQIQDQQRQLLDKTHNLSRALTPGQVLEIPHIIQNSLPEANSI 673

Query: 668  SQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHIINPVSTAGNSALTG 727
            S Q+  +   +N+QFSQ  Q    +QQQPG++ +MPGHM L  +   N +S  G+S +TG
Sbjct: 674  SNQMTKANCQSNIQFSQ--QPKLQQQQQPGMVSEMPGHMALLPTATTNQLSAGGSSIVTG 731

Query: 728  AAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNPSAL 787
            A G GQSVITDD PS STSPSTNNC   +   INSR  RS  +G+++A SA+ +L+ SAL
Sbjct: 732  AGGAGQSVITDDVPSRSTSPSTNNCTNALPQLINSRFPRSTMVGDDMAHSAATILSSSAL 791

Query: 788  ETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVC 847
            ET  SNAN++KDL  K +VKPS+NISK QNQG F P TYLNG A  TD LDTSSSTTSVC
Sbjct: 792  ETSSSNANMLKDLQPKFEVKPSLNISKIQNQGHFAPHTYLNGNAAHTDCLDTSSSTTSVC 851

Query: 848  LSQNDVHLQQN-NSLSYNPQSTL-RDASQDGEVPVDPRSNIPYGANIDGPLGS-MNPDPL 904
            LSQ+D H+ QN N LSYN QS L RD +QDGEV  D RSNIPY  NID  +G  +NPD L
Sbjct: 852  LSQSDAHMNQNSNPLSYNRQSMLFRDNNQDGEVQADARSNIPYANNIDSQIGMPLNPDSL 911

Query: 905  LTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSIDSTIND 964
            LTKG + LGK  SNN SS  ML NYEN++DAQQELSSS+VSQ+FGVPDMAFNSIDSTI+D
Sbjct: 912  LTKGTLRLGKYLSNNFSSEGMLGNYENNRDAQQELSSSMVSQTFGVPDMAFNSIDSTIDD 971

Query: 965  SSFLNGG--------PWAPPPQFPQRMRTYTKV 989
            S+FLN G        P  PP QF QRMRTYTKV
Sbjct: 972  SNFLNSGPWAPPPAPPPLPPAQF-QRMRTYTKV 1003


>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 1104

 Score = 1153 bits (2982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 691/1001 (69%), Positives = 802/1001 (80%), Gaps = 38/1001 (3%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           +K +I  ELWHACAGPLV LP +GTHV+YFPQGHSEQV+AS+ +D+  QIPNYPNLPSKL
Sbjct: 3   KKSSIKAELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKL 62

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           LC+L  +TLHAD +TD+VYAQ+TLQP+PS+D++ALLRSDLAL+S KP  +FFCK LTASD
Sbjct: 63  LCLLHTLTLHADPQTDQVYAQITLQPLPSFDKDALLRSDLALESTKPPPDFFCKQLTASD 122

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAEKIFPPLD+SMQPPAQEL+ARDLHD +W FRHIYRGQPKRHLLTTG
Sbjct: 123 TSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLLTTG 182

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP N+SSSVLSSDSMHIGILAAAAH
Sbjct: 183 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAH 242

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAANNSPFTVFYNPRASPSEFV+PLAKYYK+V+S+Q SLGMRFRMMFETE+SGTRR+MGT
Sbjct: 243 AAANNSPFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSGTRRHMGT 302

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKH 380
           +TGISDLDPV+WKNSQWRNLQVGWDESTAGEKR+RVSIWEIEPVTAPFFICPPPFFRSK 
Sbjct: 303 VTGISDLDPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVTAPFFICPPPFFRSKR 362

Query: 381 PRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAMQS 437
           PRQ    DD+ SD DN+FK+TMPW GDD  VKD Q LPGL+L QWMNMQQNP+LA+++Q 
Sbjct: 363 PRQPGMPDDELSDFDNIFKQTMPWPGDDMCVKDPQGLPGLNLAQWMNMQQNPALASSLQP 422

Query: 438 SYMHSLPGSILQNLNG-------GLS--QMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTV 488
           +Y  SL GSILQN+ G       G S  Q+ Q NN+    Q L Q  PQ+D L KLPST 
Sbjct: 423 NYAPSLSGSILQNIPGPDISHQLGFSAPQISQSNNVALNTQRLLQTAPQLDHLQKLPSTS 482

Query: 489 NPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNIL-QQQPSIQN 547
           + LG+ + PQQ LGDI+QQSRQN+  Q +P G VQAQ++ PQN+VQT+NIL QQQPS QN
Sbjct: 483 STLGTVLPPQQQLGDITQQSRQNLANQTIPQGQVQAQLVHPQNIVQTNNILQQQQPSSQN 542

Query: 548 PQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLLQKLQQQ 607
            QL  +L QN   QQQQQ I+GQNQ QNL+Q+ +PD + Q LQMSD QIQL LLQKLQQQ
Sbjct: 543 HQLHRSLSQN-PSQQQQQTIIGQNQHQNLIQSPMPDHV-QQLQMSDDQIQLQLLQKLQQQ 600

Query: 608 RQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSLPQSNIM 667
           +Q+LL+QQ+ALQ   QL Q+QD+QRQLLD + + SR+ TP Q+ E+  +   SLP++N +
Sbjct: 601 KQTLLAQQTALQHSTQLTQIQDRQRQLLDKTHNLSRALTPGQVREIPPIFQNSLPKANSI 660

Query: 668 SQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHIINPVSTAGNSALT- 726
           S  I  +   +N+QF    QQPKL+QQQPG+L +MPGH  L  +   N +S AG+S LT 
Sbjct: 661 SNPITKANCQSNIQFY---QQPKLQQQQPGLLSEMPGHTALHPTTTTNQLSAAGSSILTG 717

Query: 727 --GAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNP 784
             GA G GQSVITD+  SCSTSPS NNC   +   INSR  RS  +G+++AQSA+ +L+ 
Sbjct: 718 AGGAGGAGQSVITDEVLSCSTSPSANNCTNALPQLINSRFQRSTLVGDDMAQSAATILSS 777

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           SALET  SNAN++KDL  KS+VKPS+NISK QNQG F PQTYLNG A  TD LDTSSSTT
Sbjct: 778 SALETTSSNANMLKDLQPKSEVKPSLNISKIQNQGHFAPQTYLNGNAAHTDCLDTSSSTT 837

Query: 845 SVCLSQNDVHLQQNNS-LSYNPQSTL-RDASQDGEVPVDPRSNIPYGANIDGPLGS-MNP 901
           SVCLSQ+D H+ QNN+ LSYNPQS L RD +QDGEV  D RSNIPY  NID  +G  +NP
Sbjct: 838 SVCLSQSDAHMHQNNNPLSYNPQSLLFRDNNQDGEVQADARSNIPYANNIDSQMGMPLNP 897

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSIDST 961
           D L TKG + LGKD SNN SS  ML NYE ++DAQQE SSS+VSQ+FGVPDMAFNSIDST
Sbjct: 898 DSLSTKGTLRLGKDLSNNFSSEGMLGNYEINRDAQQEPSSSMVSQTFGVPDMAFNSIDST 957

Query: 962 INDSSFLNGGPW-------------APPPQFPQRMRTYTKV 989
           I+DS+FLN GPW              PP QF QRMRTYTKV
Sbjct: 958 IDDSNFLNSGPWAPPPAPPLPPLPPLPPAQF-QRMRTYTKV 997


>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
 gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
          Length = 1090

 Score = 1128 bits (2918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 650/997 (65%), Positives = 756/997 (75%), Gaps = 49/997 (4%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
            GEKK +N ELW ACAGPLVNLP AGTHVVYFPQGHSEQVAAS+KKD++ QIPNYPNLP+
Sbjct: 10  AGEKKNLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYPNLPA 69

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           KL+C+L NVTLHAD ETDEVYAQMTLQPVPS+D+EALLRSDL++K+NKPQ EFFCKTLTA
Sbjct: 70  KLICLLHNVTLHADPETDEVYAQMTLQPVPSFDKEALLRSDLSMKANKPQPEFFCKTLTA 129

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEKIFPPLD+S+QPPAQEL+ARDLHDNIWTFRH+YRGQPKRHLLT
Sbjct: 130 SDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLLT 189

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWSL VSGKRLFAGDSVLFIRDEK Q LLGIR+ANRQP NLSSSVLSSDSMHIGILAAA
Sbjct: 190 TGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSMHIGILAAA 249

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAANNSPFTVFYNPRA PSEFV+PLAKYYKA +S+QISLGMRFRMMFETEESGTRRYM
Sbjct: 250 AHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESGTRRYM 309

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTITGISDLDPVRWKNSQWRNLQVGWDESTAGE+ NRVSIWEIEP+TAPF IC  PFF S
Sbjct: 310 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITAPFLICSSPFFSS 369

Query: 379 KHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAM 435
           K PRQ    D D SD+D +FKRTMPW+GDDFG+ D Q LPGLSL+QWMNMQ+NPSLAN M
Sbjct: 370 KRPRQPGMPDGDYSDMDGMFKRTMPWLGDDFGMADPQGLPGLSLIQWMNMQKNPSLANPM 429

Query: 436 QSSYMHSLPGSILQNLNGG-LSQ------------MPQQNNLQYTGQSLPQQVPQIDQLA 482
             +YM+SL GS LQNL G  LS+               Q+NLQ+     P Q  Q+DQL 
Sbjct: 430 IPNYMNSLSGSALQNLAGADLSRQLGMAAPQFQQQQQMQHNLQFNNAHRPNQ--QLDQLQ 487

Query: 483 KLP-STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQ 541
           KLP + +N L S +  QQ L D+SQQ RQN+ TQ+LP+  V  Q +Q Q+L Q+ N+L  
Sbjct: 488 KLPAAALNSLDSIMQSQQQLSDVSQQPRQNLTTQSLPTTQVHTQHMQAQSLGQSQNVLPP 547

Query: 542 QPSIQNP-QLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHL 600
           Q S+QN  QL  NLPQ+L QQ  QQ I+GQ QQQ+ + +Q PDP+NQ    SD Q QL +
Sbjct: 548 QQSVQNQNQLQRNLPQSLSQQHPQQQILGQTQQQSFISSQPPDPVNQQQHFSDNQAQLQM 607

Query: 601 LQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTS 660
           LQK  QQ++SLL+QQS LQQP+QL  +QD Q+QL+DASQ+FSRS    QML++ Q T TS
Sbjct: 608 LQKPHQQQKSLLAQQSGLQQPSQLGSIQDHQKQLMDASQNFSRSLATNQMLDVSQTTSTS 667

Query: 661 LPQSNIMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHIINPVSTA 720
           LP S ++ QQ+    S +N++FSQP QQPKL+QQQ G L  + G +  P       +S  
Sbjct: 668 LPHSQVVQQQMTRINSPSNLRFSQPTQQPKLQQQQSGNLSDLSGPVNYPLPRTSYQLSAN 727

Query: 721 GNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASA 780
           G S LTG AG GQSV+ DD PS STS  TNNC  ++QP +N R     G  +E+   +  
Sbjct: 728 G-SNLTGTAGGGQSVVIDDVPSWSTSVFTNNCHSVVQPNMNGRI---TGARDEMTHCS-- 781

Query: 781 LLNPSALETMPSNANLVKDLPHKSDVKPSVN-ISKTQNQGFFTPQTYLNGAATQTDYLDT 839
                 LE M +N NL      KSDVKPSVN +SK+QN GF  PQT LN +  Q DYLD+
Sbjct: 782 ----GPLEVMSANNNLQP----KSDVKPSVNVVSKSQNHGFLAPQT-LNTSGIQFDYLDS 832

Query: 840 SSSTTSVCLSQNDVHLQQNNS--LSYNPQSTL-RDASQDGEVPVDPRSNIPYG-ANID-G 894
           SSS TS CLSQNDV LQQ  +  LS + Q  + RD+   GEV  DPR+N+ +G AN++  
Sbjct: 833 SSSATSACLSQNDVQLQQTATDPLSGSSQPLIFRDSPDGGEVQGDPRNNVAFGAANMENN 892

Query: 895 PLG-SMNPDPLLTKGMMGLGKDFSNNISS-GAMLANYENSKDAQQELSSSIVSQSFGVPD 952
            LG  M PDPL+TK  MG  KDFS+N+SS G ML++YEN K+AQ EL +S+ S       
Sbjct: 893 QLGLPMIPDPLITKSSMGSRKDFSDNLSSGGGMLSSYENPKEAQPELLASMASDY----- 947

Query: 953 MAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           + FNSIDSTIND SF++ G W PPPQ P R+RTYTKV
Sbjct: 948 VTFNSIDSTINDGSFMDRGAWEPPPQLP-RLRTYTKV 983


>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1099

 Score = 1099 bits (2842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1007 (62%), Positives = 756/1007 (75%), Gaps = 41/1007 (4%)

Query: 4   PANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           P   A  A N+GEGG  EKKTIN ELW ACAGPL+NLP+ GTHVVYFPQGHSEQVAAS+K
Sbjct: 6   PDGAAAVAPNAGEGG--EKKTINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLK 63

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           KD+D Q+PNY NLPSK+ C+L NVTLHAD +TDEVYAQMTLQPVPS+D +ALLRSD+ L+
Sbjct: 64  KDVDAQVPNYTNLPSKIPCLLHNVTLHADPDTDEVYAQMTLQPVPSFDTDALLRSDIFLR 123

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           S+KPQ EFFCK LTASDTSTHGGFSVPRRAAEKIFPPLD+S+QPPAQEL+ARDLHDN+W 
Sbjct: 124 SSKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWR 183

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRGQPKRHLLTTGWSLF+ GKRL AGDSVLF+RDEKQQLLLGIRRANRQP+NLSSS
Sbjct: 184 FRHIYRGQPKRHLLTTGWSLFIGGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSS 243

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           VLSSDSMHIG+LAAAA A ANNSPFTVFYNPRASPSEFV+PLAKY KAV+S+ IS GMRF
Sbjct: 244 VLSSDSMHIGVLAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYSKAVYSHHISPGMRF 303

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RMMFETE+SGTRRYMGTI G+SDLD VRWKNS WRNLQVGWDESTA E+++RVS+WEIEP
Sbjct: 304 RMMFETEDSGTRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIEP 363

Query: 364 VTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQ 421
           VT P+FICPPPFFRSK PR     DD  D +N+FK T+PW+GDD  VK  Q+LPGLSLVQ
Sbjct: 364 VTTPYFICPPPFFRSKIPRLLGMPDDEPDFNNLFKSTVPWLGDDMCVKGPQALPGLSLVQ 423

Query: 422 WMNMQQNPSLANAMQSSYMHSLPGSILQNLNGG---------LSQMPQQNNLQYTGQSLP 472
           WMN+QQNP+LA+++Q +   S+ G +LQNL G           SQ+ Q NN+    Q++ 
Sbjct: 424 WMNIQQNPALASSLQPNCGPSMSGLVLQNLPGADIANPLGFSTSQISQSNNVSVDAQNIL 483

Query: 473 QQVPQIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNL 532
           Q   Q+D + K P   + LG+   P Q LGDI+QQ R N+  Q LP      Q+L PQ +
Sbjct: 484 QTSQQLDHIQKPPCPSSALGAVTQPLQQLGDITQQPR-NLTNQTLPHDQAHTQLLNPQRV 542

Query: 533 VQTSNI-LQQQPSIQNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQM 591
           VQT+NI  QQQ SIQ  QL  +L QN + Q+ QQ  +G N++Q + Q+ +PD  NQ LQM
Sbjct: 543 VQTNNIHQQQQSSIQKQQLLRSLSQN-RAQKHQQTTLGLNERQIVFQSPMPDHFNQQLQM 601

Query: 592 SDKQIQLHLLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQML 651
           SD Q++  LLQKLQQQ+Q+LL+QQSALQQPA LIQ+QDQQRQLLD + + S S  P Q+L
Sbjct: 602 SDNQVRFQLLQKLQQQQQTLLAQQSALQQPA-LIQIQDQQRQLLDVANN-SSSPIPGQVL 659

Query: 652 EMHQVTPTSLPQSNIMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPAS 711
           E       SLP++N ++ QI    S  N  +S          QQP +L +M GH+GLP +
Sbjct: 660 ENLPTLQNSLPEANSITHQITMPSSQKNFHYSH-------LSQQPALLSEMSGHVGLPPT 712

Query: 712 HIINPVSTAGNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIG 771
              NP+S +G S LT   GVGQSVITDD PSCSTSPSTNN   ++ P ++S+ HRS  IG
Sbjct: 713 VTTNPLSASGGSILT---GVGQSVITDDVPSCSTSPSTNNRASVLPPVVSSQIHRSTTIG 769

Query: 772 EEVAQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAA 831
           +++AQSA  +   S LETM SNAN+V+    K +VK S+NISK QNQG   PQTYLNG  
Sbjct: 770 DDMAQSAVTISGASTLETMSSNANIVQP---KYEVKASLNISKNQNQGNVAPQTYLNGVV 826

Query: 832 TQTDYLDTSSSTTSVCLSQNDVHLQQN-NSLSYNPQST-LRDASQDGEVPVDPRSNIPYG 889
            QTDYLD+SSSTTS+   ++D H+ QN N  SYNPQ    RD SQ+ EV  D R+N+  G
Sbjct: 827 -QTDYLDSSSSTTSLYHFRSDTHMHQNTNPFSYNPQLVYCRDNSQNVEVQADARNNVLIG 885

Query: 890 ANIDGPLGS-MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSF 948
            N++G +G   N D LLTKG +GLGK+ SN  +SG +L + EN+K    E+SSS+VSQ+F
Sbjct: 886 NNVNGQMGMPSNLDSLLTKGTVGLGKELSNKFASGGLLRDLENNKGVPPEISSSMVSQTF 945

Query: 949 GVPDMAFNSIDSTINDSSFLNGGPW------APPPQFPQRMRTYTKV 989
            VPDM+FNSIDSTI+ SSFLN GPW       P  Q  QR+RTYTKV
Sbjct: 946 EVPDMSFNSIDSTIDGSSFLNRGPWDLPPPPPPQQQQVQRIRTYTKV 992


>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
          Length = 1113

 Score = 1097 bits (2836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 635/1010 (62%), Positives = 752/1010 (74%), Gaps = 51/1010 (5%)

Query: 13   NSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPN 72
            NSGEGG  EKK+IN ELW ACAGPL+NLP+ GTHVVYFPQGHSEQVAAS+KKD+D Q+PN
Sbjct: 15   NSGEGG--EKKSINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPN 72

Query: 73   YPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFF 132
            Y NLPSK+ C+L NVTLHAD +TDEVYAQM L+PVPS+D +ALLRSD++LK +KPQ EFF
Sbjct: 73   YTNLPSKIPCLLHNVTLHADPDTDEVYAQMALRPVPSFDTDALLRSDISLKLSKPQPEFF 132

Query: 133  CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            CK LTASDTSTHGGFSVPRRAAEKIFPPLD+S+Q P QEL+ARDLHDN+W FRHIYRG+P
Sbjct: 133  CKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKP 192

Query: 193  KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
            KRHLLTTGWSLF+SGKRL AGDSVLF+RDEKQQLLLGIRRANRQP+NLSSSVLSSDSMHI
Sbjct: 193  KRHLLTTGWSLFISGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHI 252

Query: 253  GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
            G+LAAAA A ANNSPFTVFYNPRASPSEFV+PLAKYYKAV+S+ IS GM FRM FETE+S
Sbjct: 253  GVLAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDS 312

Query: 313  GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP 372
            GTRRYMGTI G+SDLD VRWKNS WRNLQVGWDESTA ++R+RVS+WEIEPVT P+FICP
Sbjct: 313  GTRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPVTTPYFICP 372

Query: 373  PPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPS 430
            PPFFRSK PR     DD  D +N+FK T+PW+GDD  +KD Q+LPGLSLVQWMNMQQNP+
Sbjct: 373  PPFFRSKRPRLLGMPDDEPDFNNLFKSTVPWLGDDMCIKDPQALPGLSLVQWMNMQQNPA 432

Query: 431  LANAMQSSYMHSLPGSILQNLNGG---------LSQMPQQNNLQYTGQSLPQQVPQIDQL 481
            LA+++Q + + S+ G +LQNL G           SQ  Q NN+    Q++ Q   Q+D +
Sbjct: 433  LASSLQPNCVPSMSGLVLQNLPGADIANQLGFSTSQTSQSNNVSVNAQNILQTSQQLDHI 492

Query: 482  AKLPSTVNPLGSNI-LPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNIL- 539
             KLP   + LG+   LPQQ L DI+QQ R N+  Q LP      Q+L  Q +VQT+NIL 
Sbjct: 493  QKLPCPSSALGAVTQLPQQ-LADITQQPR-NLTNQTLPQNEAHTQLLNSQRVVQTNNILQ 550

Query: 540  QQQPSIQNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLH 599
            QQQ SIQN QL  +L QN   Q+ QQ   GQN++QN+ Q+ +PD  NQ LQMSD Q++  
Sbjct: 551  QQQSSIQNHQLLRSLSQN-PPQKDQQTTFGQNERQNVFQSPMPDHFNQQLQMSDNQVRFQ 609

Query: 600  LLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPT 659
            LLQKLQQQ+Q+LL+QQSALQQPA LIQ+QDQQRQLLD + + S S    Q+LE       
Sbjct: 610  LLQKLQQQQQTLLAQQSALQQPA-LIQVQDQQRQLLDVTNN-SSSLISGQVLENPPTLQN 667

Query: 660  SLPQSNIMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGILPQMPGHMGLPASHIINPVST 719
            SLP++N ++ QI    S  N  +S   QQP L       L +M GH GL  +   NP+S 
Sbjct: 668  SLPEANSVTHQITMPSSQKNFHYSHLSQQPAL-------LSEMSGHAGLLPTVTTNPLSA 720

Query: 720  AGNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSAS 779
            +G S LTGA   GQSVITDD PSCSTSPSTNN    + P ++S+ HRS  IG+++AQSA 
Sbjct: 721  SGGSILTGA---GQSVITDDVPSCSTSPSTNNRASALPPVVSSQIHRSTTIGDDMAQSAV 777

Query: 780  ALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDT 839
             +  PS LET+ SNAN+VKD+  K +VKPS NISK QN G    Q YLNG   QTDYLD+
Sbjct: 778  TISGPSTLETLSSNANMVKDVRPKYEVKPSSNISKNQNHGNVARQMYLNGVV-QTDYLDS 836

Query: 840  SSSTTSVCLSQNDVHLQQNNS-LSYNPQST-LRDASQDGEVPVDPRSNIPYGANIDGPLG 897
            SSSTTS+   Q+D H+ QNN+  SYNPQ    RD SQ+ EV  D RSN+P+  +I+G +G
Sbjct: 837  SSSTTSLYHFQSDTHMHQNNNPFSYNPQLIYCRDNSQNVEVQADARSNVPFVNDINGQMG 896

Query: 898  S-MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFN 956
               N D LLT G +GLGKD SNN SSG +L + EN+K  Q ELSSS+VSQ+F VPDM+FN
Sbjct: 897  MPSNLDSLLTNGTVGLGKDLSNNFSSGGLLGDLENNKGVQPELSSSMVSQTFEVPDMSFN 956

Query: 957  SIDSTINDSSFLNGGPW-----------------APPPQFPQRMRTYTKV 989
            SIDSTI+ SSFLN GPW                     Q  QR+RTYTKV
Sbjct: 957  SIDSTIDGSSFLNRGPWDLPPPPPPPPPPPPPPPPQQQQQIQRIRTYTKV 1006


>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
 gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
          Length = 1096

 Score = 1068 bits (2762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1006 (61%), Positives = 743/1006 (73%), Gaps = 49/1006 (4%)

Query: 7   TAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI 66
           +A  A+ + EG       +N+ELW ACAGPLVNLP  GTHVVYFPQGHSEQVAAS+KKD 
Sbjct: 10  SAAIAAVASEGEDKNDGGVNSELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDG 69

Query: 67  DGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNK 126
           D Q+PNY NLPSKL C L ++TLHAD++TDEVYA+MTLQPV S+D +A+LRSD++LKSNK
Sbjct: 70  DVQVPNYSNLPSKLPCTLHSLTLHADSDTDEVYARMTLQPVSSFDMDAILRSDISLKSNK 129

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
           PQ EFFCK LTASDTSTHGGFSVPRRAAEKIFPPLDFS QPPAQEL+A+DLH N+W FRH
Sbjct: 130 PQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRH 189

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRGQPKRHLLTTGWSLF+SGKRL AGDSVLFIRDEKQQLLLGIRRANRQP NLSSSVLS
Sbjct: 190 IYRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLS 249

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           SDSMHIGILAAAAHA+ANNSPFTVFYNPRASPSEFV+PLAKYY+AV+S+QIS GMRFRMM
Sbjct: 250 SDSMHIGILAAAAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMM 309

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FETE+SGTRRYMGT+ G+SDLD VRWKNSQWRNLQVGWDE+TAGE+R+RVSIWEIEPVTA
Sbjct: 310 FETEDSGTRRYMGTVIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVTA 369

Query: 367 ---PFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWM 423
                        R + P   DD++ D  N+FK TMPW+GDD  +KD Q+ PG+SL QWM
Sbjct: 370 PFFICPPPFFRPKRPRQPGMPDDESFDFSNLFKNTMPWLGDDMCMKDPQAFPGMSLAQWM 429

Query: 424 NMQQNPSLANAMQSSYMHSLPGSILQNLNG-------GLS--QMPQQNNLQYTGQSLPQQ 474
           N+QQNP++ +++Q +++ S+P S++QNL G       G S  Q+ Q NN+ +    +PQ 
Sbjct: 430 NIQQNPAMVSSLQPNHVPSMPASVVQNLPGSDIAHQLGFSTQQISQSNNVAFNAPGMPQ- 488

Query: 475 VPQIDQLAKLP-STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLV 533
                    +P ST + LG+ + P+       Q SRQN+  Q LP   VQ Q+L PQ++V
Sbjct: 489 ---------MPLSTSSGLGAVMQPE-------QHSRQNLAYQTLPQSQVQTQLLNPQSIV 532

Query: 534 QTSNILQ-QQPSIQNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMS 592
           QT+NILQ QQPSIQN QL  +L QN   QQ QQ I+GQNQ QN+++  +PD INQ L MS
Sbjct: 533 QTNNILQSQQPSIQNNQLHRSLSQN-PLQQFQQTIIGQNQPQNMIRPTMPDHINQQLHMS 591

Query: 593 DKQIQLHLLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLE 652
           D Q++L LLQKLQQQ+Q+LLSQQSALQQPAQ+IQ  DQQRQ LD + + SR+ TP Q+ E
Sbjct: 592 DNQVRLQLLQKLQQQQQTLLSQQSALQQPAQIIQNHDQQRQELDVTHN-SRAITPRQVFE 650

Query: 653 MHQVTPTSLPQSNIMSQQIANSGSLNNVQFSQPPQ----QPKLEQQQPGILPQMPGHMGL 708
           +      SL ++N M+ Q+ +  S NNVQFS P +    Q + +Q QPG L +M  H+GL
Sbjct: 651 IPHTLQNSLLEANSMNHQMTDHSSQNNVQFSHPAKQQKLQHQQQQTQPGSLSKMSSHVGL 710

Query: 709 PASHIINPVSTAGNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSA 768
           P++   N +S +G S  T A G   SV TD  PSCSTSPSTNNC   + P   S+   S 
Sbjct: 711 PSATTANQLSASGCSIRTVATGTVPSVNTDHAPSCSTSPSTNNCVGALPPVTTSQILMST 770

Query: 769 GIGEEVAQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLN 828
            IG++VAQSA  +L+ S      SNAN+VK      DVKP +NIS+  N   F PQT LN
Sbjct: 771 -IGDDVAQSAVTILSQS------SNANVVKYAQPNYDVKPCLNISENHNPVNFYPQTCLN 823

Query: 829 GAATQTDYLDTSSSTTSVCLSQNDVHLQQNNS-LSYNPQSTL-RDASQDGEVPVDPRSNI 886
           GAA QTD LDTSSSTTSVCLSQ+D    Q +  +SY PQS   RD  Q+ EV  D R N+
Sbjct: 824 GAAIQTDCLDTSSSTTSVCLSQSDSRFHQTDRPVSYYPQSMFSRDNIQNVEVQADARCNV 883

Query: 887 PYGANIDGPLGS-MNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVS 945
            YG +++G +   +N D  +TKG   LGKD SN+ SSG +L  YEN+ DAQ ELSSS+VS
Sbjct: 884 AYGNSMNGQMRMPLNLDSTVTKGTARLGKDLSNDFSSGGLLGGYENNGDAQPELSSSMVS 943

Query: 946 QSFGVPDMAFNSIDSTINDSSFLNGGPWA--PPPQFPQRMRTYTKV 989
           Q++GVPDM FNSIDSTINDS FL+ GPWA  PPP   QR+RTYTKV
Sbjct: 944 QTWGVPDMTFNSIDSTINDSGFLDSGPWAPRPPPHQFQRIRTYTKV 989


>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1083

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 520/1032 (50%), Positives = 634/1032 (61%), Gaps = 143/1032 (13%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N ELW+ACAGPLV LP  G+ VVYFPQGHSEQVAASM+KD D QIP+YPNLPSKL+CIL
Sbjct: 20  VNQELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 79

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLALKSNKPQTEFFCKTLTASDT 141
            +VT+ +D ETDEVYA+MTLQPV +    D+E LL S+LALK NKPQTEFFCKTLTASDT
Sbjct: 80  HSVTMQSDPETDEVYARMTLQPVSNVTQCDKEILLASELALKQNKPQTEFFCKTLTASDT 139

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSVPRRAAE+IFP LDFS+QPPAQEL ARDLHD IWTFRHI+RGQPKRHLLTTGW
Sbjct: 140 STHGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLLTTGW 199

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           SLF+SGKRL AGDSVLFIRD KQQLLLGIRRANRQP NLSSSVLSSDSMHIG+LAAAAHA
Sbjct: 200 SLFISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGVLAAAAHA 259

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
           AANNS FT+FYNPRASPSEFV+P AKY KAV+ NQ+SLGMRFRMMFETEESGTRRYMGTI
Sbjct: 260 AANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 319

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
           TGISDLDPVRWKNSQWRN+QV WDE+   E+R RVS+W+IEPV APFFI P P F +K  
Sbjct: 320 TGISDLDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIAPFFIYPTPLFTAKRA 379

Query: 382 RQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSL---VQWMNMQQNPSL 431
           RQ    DDD S +DN+FKRTMPW+G++   KD  +    +PGL+L   VQWMNMQQN SL
Sbjct: 380 RQPGMIDDDTSGMDNLFKRTMPWLGEEICKKDMNTQNSIVPGLNLAQSVQWMNMQQNLSL 439

Query: 432 A-NAMQSSYMHSLPGSILQNLNGG--------LSQMPQQNNLQYTGQSLPQQVPQIDQLA 482
           A   MQ   ++SL G  +QNL+            Q  QQNN+Q+    LPQQ  Q +QLA
Sbjct: 440 AGTVMQPELLNSLAGKHVQNLSAADISRQISFQPQFLQQNNIQFDTSLLPQQNQQAEQLA 499

Query: 483 KLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQ 542
           K  +T N L + + PQ+   D     +Q  +TQ +        + QP+++VQ        
Sbjct: 500 KAIATPNQLENIMAPQKVDQDCYSDQKQRAVTQTVQGSQANLNITQPEHVVQA------- 552

Query: 543 PSIQNPQLPANLPQNLQQQQQQQHIMGQN---------------------------QQQN 575
              + PQ+        QQ   Q H + Q                            QQ  
Sbjct: 553 -QFEQPQVILQAQLQQQQPLVQSHTIFQGGLQEIQVLQQQQQPQHHQQVQHSVQEQQQMK 611

Query: 576 LMQTQLPDPINQNLQM-SDKQIQLHLLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQL 634
           +    +P   N N Q+ SD Q++L LL+ L  Q+   + QQ           L D Q+Q+
Sbjct: 612 IRPVHVPSDANMNTQLSSDHQMKLQLLKALHSQQHLTMEQQKM---------LFDLQQQV 662

Query: 635 LDA-SQSFSRSGTPTQMLEMHQVTPTSLPQSNIMSQQIANSGSLNNVQFSQPPQQPKLEQ 693
           +++ S    R    TQ +  H                  NS   N +Q++    Q K + 
Sbjct: 663 INSQSNPQQRVQGATQTVGFH------------------NS---NTIQYA---TQQKAQS 698

Query: 694 QQPGILPQMPGHMGLPASHIINPVSTAGNSALTGAAGVGQSVITDD------------NP 741
            QP  +   PG   +P +   + +++ G S+L   + + Q V TD+            NP
Sbjct: 699 HQP--IEGSPGGT-IPVAK-SDTITSIGASSLNVTSRM-QLVRTDNVPSSSTSPSTTTNP 753

Query: 742 SCSTS-PSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNPSALETMPSNANLVKDL 800
               S PS++  Q L  PT    +  S G+G  + Q                      ++
Sbjct: 754 VLLHSIPSSSKNQSL--PTAAKTSQSSVGLGSTIEQ----------------------EM 789

Query: 801 PHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVCLSQNDVHLQQNN- 859
            H   VKP++ I K   QG  T + Y+N      DYLDTSSS TSVCLSQ D  LQQN  
Sbjct: 790 KHYQSVKPTIMIPKMIEQGPATERDYINNP--HMDYLDTSSSATSVCLSQADGSLQQNFP 847

Query: 860 SLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLG-SMNPDPLLTKGMMGLGKDFS 917
           S S++    LRD + D E  + DP +N+ +G NIDG LG  +N D LL      +  D  
Sbjct: 848 SSSFDQHQLLRDTAPDSEFEISDPTNNLLFGVNIDGQLGLPLNADALLAN---SIENDKF 904

Query: 918 NNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSIDSTINDSSFLNGGPWAPPP 977
            +  +G  ++NY +SKD+QQELSSS++S S GV DM FNSIDS  ND  FLN    AP P
Sbjct: 905 MDEMAGNGISNYISSKDSQQELSSSMISHSLGVADMGFNSIDSATNDPPFLNRNSRAPAP 964

Query: 978 QFPQRMRTYTKV 989
              QRMRTYTKV
Sbjct: 965 AH-QRMRTYTKV 975


>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
          Length = 1142

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/548 (68%), Positives = 440/548 (80%), Gaps = 20/548 (3%)

Query: 20  GEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GE+K   IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAASM+KD+D  +P+YPNLP
Sbjct: 34  GERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLP 93

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
           SKL+C+L  V LHAD +TDEVYAQMTLQPV +Y +EAL  S+LALK  +PQ EFFCKTLT
Sbjct: 94  SKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLT 153

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARD+HDN+WTFRHIYRGQPKRHLL
Sbjct: 154 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLL 213

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFVSGKRLFAGDSV+ +RDEK QLLLGIRRANRQP N+SSSVLSSDSMHIG+LAA
Sbjct: 214 TTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAA 273

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAAN+SPFT+FYNPRASP+EFV+P AKY KA++SNQISLGMRFRMMFETEE GTRRY
Sbjct: 274 AAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRY 333

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
           MGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV APFF+CP PFF 
Sbjct: 334 MGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFG 393

Query: 378 SKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQ----SLPGLSLVQWMNM--QQNPSL 431
            K PRQ DD+ S+++N+FKR MPW+G++  +KD+Q    + PGLSLVQWMNM  QQ+ SL
Sbjct: 394 VKRPRQLDDE-SEMENLFKRAMPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQSSSL 452

Query: 432 AN-AMQSSYMHSLPGSILQNLNGGL--------SQMPQQNNLQYTGQSLPQQVPQIDQLA 482
           AN A QS Y+ +L    +QNL            + + QQN +Q+    LPQQ+  ++ L+
Sbjct: 453 ANTAAQSEYLQALGNPAMQNLAADELARQLYVQNNLLQQNCIQFNSPKLPQQMQTMNDLS 512

Query: 483 KLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQ 542
           K    +N LG+ I PQ    D     RQ    Q +P    Q+ ++Q Q +VQ + + QQ+
Sbjct: 513 KAAIPLNQLGAIINPQDQKQDAVNHQRQQNSIQVIPLSQAQSNLVQAQVIVQ-NQMQQQK 571

Query: 543 PS-IQNPQ 549
           PS  QNPQ
Sbjct: 572 PSPTQNPQ 579


>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
          Length = 1139

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/548 (68%), Positives = 440/548 (80%), Gaps = 20/548 (3%)

Query: 20  GEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GE+K   IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAASM+KD+D  +P+YPNLP
Sbjct: 31  GERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLP 90

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
           SKL+C+L  V LHAD +TDEVYAQMTLQPV +Y +EAL  S+LALK  +PQ EFFCKTLT
Sbjct: 91  SKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEFFCKTLT 150

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARD+HDN+WTFRHIYRGQPKRHLL
Sbjct: 151 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLL 210

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFVSGKRLFAGDSV+ +RDEK QLLLGIRRANRQP N+SSSVLSSDSMHIG+LAA
Sbjct: 211 TTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAA 270

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAAN+SPFT+FYNPRASP+EFV+P AKY KA++SNQISLGMRFRMMFETEE GTRRY
Sbjct: 271 AAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRY 330

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
           MGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV APFF+CP PFF 
Sbjct: 331 MGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFG 390

Query: 378 SKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQ----SLPGLSLVQWMNM--QQNPSL 431
            K PRQ DD+ S+++N+FKR MPW+G++  +KD+Q    + PGLSLVQWMNM  QQ+ SL
Sbjct: 391 VKRPRQLDDE-SEMENLFKRAMPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQSSSL 449

Query: 432 AN-AMQSSYMHSLPGSILQNLNGGL--------SQMPQQNNLQYTGQSLPQQVPQIDQLA 482
           AN A QS Y+ +L    +QNL            + + QQN +Q+    LPQQ+  ++ L+
Sbjct: 450 ANTAAQSEYLQALGNPAMQNLAADELARQLYVQNNLLQQNCIQFNSPKLPQQMQTMNDLS 509

Query: 483 KLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQ 542
           K    +N LG+ I PQ    D     RQ    Q +P    Q+ ++Q Q +VQ + + QQ+
Sbjct: 510 KAAIPLNQLGAIINPQDQKQDAVNHQRQQNSIQVIPLSQAQSNLVQAQVIVQ-NQMQQQK 568

Query: 543 PS-IQNPQ 549
           PS  QNPQ
Sbjct: 569 PSPTQNPQ 576


>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
 gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
          Length = 1143

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/544 (67%), Positives = 437/544 (80%), Gaps = 19/544 (3%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           ++ GAA+  GE    +   IN +LW+ACAGPLV+LP  G+ VVYFPQGHSEQVAASM+KD
Sbjct: 21  DSTGAAACEGER---KAPAINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKD 77

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN 125
           ID  +P+YPNLPSKL+C+L +VTLHAD +TDEVYAQMTLQPV +Y +EAL  S+LALK  
Sbjct: 78  IDAHVPSYPNLPSKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHA 137

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
           +PQ EFFCKTLTASDTSTHGGFSVPRRAAEKI PPLDFSMQPPAQEL ARD+HDN+WTFR
Sbjct: 138 RPQMEFFCKTLTASDTSTHGGFSVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFR 197

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL 245
           HI+RGQPKRHLLTTGWSLFV GKRLFAGDSV+F+RDE+QQLLLGIRRA+RQP N+SSSVL
Sbjct: 198 HIFRGQPKRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVL 257

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
           SSDSMHIG+LAAAAHAAANNSPFT+FYNPRASP+EFV+P AKY KA++SNQISLGMRFRM
Sbjct: 258 SSDSMHIGVLAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRM 317

Query: 306 MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           MFETEE G RRYMGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVS+WEIEP+ 
Sbjct: 318 MFETEELGMRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIA 377

Query: 366 APFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQ----SLPGLSLVQ 421
           APFFICP PFF  K PRQ DD++S+++N+FKR MPW+G++  +KD+Q    ++PGLSLVQ
Sbjct: 378 APFFICPQPFFGVKRPRQIDDESSEMENLFKRAMPWLGEEICIKDAQTQNTTMPGLSLVQ 437

Query: 422 WMNM--QQNPSLAN-AMQSSYMHSLPGSILQNLNGGL--------SQMPQQNNLQYTGQS 470
           WMNM  QQ+ +LAN  +QS Y+ SL    +QNL            + + QQN++Q     
Sbjct: 438 WMNMNRQQSSTLANTGIQSEYLRSLSNPAMQNLGAAELARQLYVQNHLLQQNSVQLNASK 497

Query: 471 LPQQVPQIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQNM-ITQNLPSGPVQAQVLQP 529
           LPQQ+  I++LAK   + N L +    Q+   ++  Q RQ   I Q +P    QA ++Q 
Sbjct: 498 LPQQMQPINELAKGSLSCNQLDTITNHQELKQEVGNQQRQQQHINQTIPLSQAQANLVQA 557

Query: 530 QNLV 533
           Q ++
Sbjct: 558 QVII 561


>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
          Length = 1149

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/560 (70%), Positives = 452/560 (80%), Gaps = 20/560 (3%)

Query: 10  AASNSGEGGGGEKK--TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
            AS +G G  GEKK   IN+ELWHACAGPLV+LP AG+ VVYFPQGHSEQVAASM+KD+D
Sbjct: 25  VASLAGAGCEGEKKAPVINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVD 84

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP 127
             +PNYPNLPSKL+C+L N+TLHAD ETDEVYAQMTLQPV SY +EAL  S+LALK ++P
Sbjct: 85  AHVPNYPNLPSKLICLLHNITLHADLETDEVYAQMTLQPVTSYGKEALQLSELALKQSRP 144

Query: 128 QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHI 187
           Q EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE+ ARDLHDN+WTFRHI
Sbjct: 145 QNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHI 204

Query: 188 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSS 247
           YRGQPKRHLLTTGWSLFVSGKRLFAGDSV+F+RDE+QQLLLGIRRANRQP N+SSSVLSS
Sbjct: 205 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSS 264

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
           DSMHIGILAAAAHA ANNSPFT+FYNPRASP+EFV+P AKY KAV+ NQ+SLGMRFRMMF
Sbjct: 265 DSMHIGILAAAAHADANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMF 324

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           ETEE GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV AP
Sbjct: 325 ETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAP 384

Query: 368 FFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQW- 422
           FFICPPPFF SK PRQ DD++S+++N+ KR MPW+G++  +KD Q+    +PGLSLVQW 
Sbjct: 385 FFICPPPFFGSKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWM 444

Query: 423 -MNMQQNPSLAN-AMQSSYMHSLPGSILQNLNG-GLSQ------MPQQNNLQYTGQSLPQ 473
            MNMQQ  S AN AMQS Y+ S+    +QN+    LS+      + QQNN+Q+    LPQ
Sbjct: 445 NMNMQQGSSFANTAMQSEYLRSITNPSMQNIGSTDLSRQLLQNQLLQQNNIQFNTPKLPQ 504

Query: 474 QVPQIDQLAKLPSTVNPLGSNILPQQPLGDISQ-QSRQNMITQNLPSGPVQAQVLQPQNL 532
           Q+   + L+K    +N LG +   Q+   D S  Q +Q  +   LP    Q  + Q Q L
Sbjct: 505 QMQPNNDLSKAALPLNQLGVSTKLQEQTQDASNLQRQQQSMNYALPLSQAQTSLAQAQVL 564

Query: 533 VQTSNILQQQPSIQNPQLPA 552
           VQ  N +QQQP  QN QLPA
Sbjct: 565 VQ--NQMQQQPMSQN-QLPA 581


>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
 gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
          Length = 1143

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/535 (71%), Positives = 439/535 (82%), Gaps = 18/535 (3%)

Query: 17  GGGGEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
           G  GEKK   IN+ELWHACAGPLV+LP AG+ VVYFPQGHSEQVAASM+KD+DG +P+YP
Sbjct: 22  GCEGEKKAPPINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHVPSYP 81

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
           NLPSKL+C+L NVTLHAD ETDEVYAQMTL PV SY +EAL  S+LALK  +PQTEFFCK
Sbjct: 82  NLPSKLICLLHNVTLHADPETDEVYAQMTLLPVTSYGKEALQLSELALKQPRPQTEFFCK 141

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE+ ARDLHDN+WTFRHIYRGQPKR
Sbjct: 142 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKR 201

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWSLFVSGKRLFAGDSV+F+RDE+QQLLLGIRRANRQP N+SSSVLSSDSMHIGI
Sbjct: 202 HLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGI 261

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAANNSPFT+FYNPRASP+EFVVP AKY KA++ NQISLGMRFRMMFETEE GT
Sbjct: 262 LAAAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGT 321

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV APFFICPPP
Sbjct: 322 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPP 381

Query: 375 FFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQW--MNMQQN 428
           FF SK PRQ DD++S+++N+ KR MPW+G++  +KD Q+    +PGLSLVQW  MNMQQN
Sbjct: 382 FFGSKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTVMPGLSLVQWMNMNMQQN 441

Query: 429 PSLAN-AMQSSYMHSLPGSILQNLNGG--------LSQMPQQNNLQYTGQSLPQQVPQID 479
            S  N AMQS Y+ SL    +QNL            +Q+ QQN++Q++   LPQQ+  ++
Sbjct: 442 SSFGNSAMQSEYLRSLSNPNMQNLGAADLSRQLNMQNQILQQNSIQFSSPKLPQQMQPVN 501

Query: 480 QLAKLPSTVNPLGSNILPQQPLGDISQ-QSRQNMITQNLPSGPVQAQVLQPQNLV 533
           +L+K    +N LG     Q+   D S  Q +Q  + Q LP    Q  ++Q Q L+
Sbjct: 502 ELSKASLPLNQLGVGTKQQEQTQDPSSLQRQQQSMNQLLPLSQSQTNLVQAQVLI 556


>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
          Length = 1161

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/547 (71%), Positives = 445/547 (81%), Gaps = 21/547 (3%)

Query: 15  GEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           G G  GEK     IN+ELWHACAGPLV+LP AG+ VVYFPQGHSEQVAASM+KD+D  +P
Sbjct: 34  GSGCEGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVP 93

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
           +YPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV SY +EAL  S+LALK  +PQTEF
Sbjct: 94  SYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEF 153

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARDLHDN+WTFRHIYRGQ
Sbjct: 154 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQ 213

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           PKRHLLTTGWSLFVSGKRLFAGDSV+F+RDEKQQLLLGIRRANRQP N+SSSVLSSDSMH
Sbjct: 214 PKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 273

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           IGILAAAAHAAANNSPFT+FYNPRASP+EFV+P AKY KAV+ NQISLGMRFRMMFETEE
Sbjct: 274 IGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEE 333

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
            GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV APFFIC
Sbjct: 334 LGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFIC 393

Query: 372 PPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQW--MNM 425
           PPPFF +K PRQ DD++S+++N+ KR MPW+G++  +KD Q+    +PGLSLVQW  MNM
Sbjct: 394 PPPFFGAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNM 453

Query: 426 QQNPSLAN-AMQSSYMHSLPGSILQNLNGG-LSQ-------MPQQNNLQYTGQSLPQQVP 476
           QQ+ S AN AMQS Y+ SL    +QNL    LS+       + QQNN+Q+    L QQ+ 
Sbjct: 454 QQSSSFANTAMQSEYLRSLSNPNMQNLGAADLSRQLCLQNQLLQQNNIQFNTPKLSQQMQ 513

Query: 477 QIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQN-MITQNLPSGPVQAQVLQPQNLVQT 535
            +++LAK    +N LG +  PQ+ + D S   RQ   +   LP    Q  + Q Q LVQ 
Sbjct: 514 PVNELAKAGIPLNQLGVSTKPQEQIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQ- 572

Query: 536 SNILQQQ 542
            N +QQQ
Sbjct: 573 -NQMQQQ 578


>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
          Length = 1138

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/547 (71%), Positives = 445/547 (81%), Gaps = 21/547 (3%)

Query: 15  GEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           G G  GEK     IN+ELWHACAGPLV+LP AG+ VVYFPQGHSEQVAASM+KD+D  +P
Sbjct: 11  GSGCEGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVP 70

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
           +YPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV SY +EAL  S+LALK  +PQTEF
Sbjct: 71  SYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEF 130

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARDLHDN+WTFRHIYRGQ
Sbjct: 131 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQ 190

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           PKRHLLTTGWSLFVSGKRLFAGDSV+F+RDEKQQLLLGIRRANRQP N+SSSVLSSDSMH
Sbjct: 191 PKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 250

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           IGILAAAAHAAANNSPFT+FYNPRASP+EFV+P AKY KAV+ NQISLGMRFRMMFETEE
Sbjct: 251 IGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEE 310

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
            GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV APFFIC
Sbjct: 311 LGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFIC 370

Query: 372 PPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQW--MNM 425
           PPPFF +K PRQ DD++S+++N+ KR MPW+G++  +KD Q+    +PGLSLVQW  MNM
Sbjct: 371 PPPFFGAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNM 430

Query: 426 QQNPSLAN-AMQSSYMHSLPGSILQNLNGG-LSQ-------MPQQNNLQYTGQSLPQQVP 476
           QQ+ S AN AMQS Y+ SL    +QNL    LS+       + QQNN+Q+    L QQ+ 
Sbjct: 431 QQSSSFANTAMQSEYLRSLSNPNMQNLGAADLSRQLCLQNQLLQQNNIQFNTPKLSQQMQ 490

Query: 477 QIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQN-MITQNLPSGPVQAQVLQPQNLVQT 535
            +++LAK    +N LG +  PQ+ + D S   RQ   +   LP    Q  + Q Q LVQ 
Sbjct: 491 PVNELAKAGIPLNQLGVSTKPQEQIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQ- 549

Query: 536 SNILQQQ 542
            N +QQQ
Sbjct: 550 -NQMQQQ 555


>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
          Length = 1137

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/547 (71%), Positives = 445/547 (81%), Gaps = 21/547 (3%)

Query: 15  GEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           G G  GEK     IN+ELWHACAGPLV+LP AG+ VVYFPQGHSEQVAASM+KD+D  +P
Sbjct: 11  GSGCEGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVP 70

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
           +YPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV SY +EAL  S+LALK  +PQTEF
Sbjct: 71  SYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEF 130

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARDLHDN+WTFRHIYRGQ
Sbjct: 131 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQ 190

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           PKRHLLTTGWSLFVSGKRLFAGDSV+F+RDEKQQLLLGIRRANRQP N+SSSVLSSDSMH
Sbjct: 191 PKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 250

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           IGILAAAAHAAANNSPFT+FYNPRASP+EFV+P AKY KAV+ NQISLGMRFRMMFETEE
Sbjct: 251 IGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEE 310

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
            GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV APFFIC
Sbjct: 311 LGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFIC 370

Query: 372 PPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQW--MNM 425
           PPPFF +K PRQ DD++S+++N+ KR MPW+G++  +KD Q+    +PGLSLVQW  MNM
Sbjct: 371 PPPFFGAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNM 430

Query: 426 QQNPSLAN-AMQSSYMHSLPGSILQNLNGG-LSQ-------MPQQNNLQYTGQSLPQQVP 476
           QQ+ S AN AMQS Y+ SL    +QNL    LS+       + QQNN+Q+    L QQ+ 
Sbjct: 431 QQSSSFANTAMQSEYLRSLSNPNMQNLGAADLSRQLCLQNQLLQQNNIQFNTPKLSQQMQ 490

Query: 477 QIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQN-MITQNLPSGPVQAQVLQPQNLVQT 535
            +++LAK    +N LG +  PQ+ + D S   RQ   +   LP    Q  + Q Q LVQ 
Sbjct: 491 PVNELAKAGIPLNQLGVSTKPQEQIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQ- 549

Query: 536 SNILQQQ 542
            N +QQQ
Sbjct: 550 -NQMQQQ 555


>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
          Length = 1147

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/531 (67%), Positives = 427/531 (80%), Gaps = 17/531 (3%)

Query: 20  GEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GE+K   IN +LW+ACAGPLV+LP  G+ VVYFPQGHSEQVAASM+KDID  +P+YPNLP
Sbjct: 34  GERKAPAINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLP 93

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
           SKL+C+L +VTLHAD +TDEVYAQMTLQPV +Y +EAL  S+LALK  +PQ EFFCKTLT
Sbjct: 94  SKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLT 153

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEKI PPLDF MQPPAQEL ARD+HDN+WTFRHI+RGQPKRHLL
Sbjct: 154 ASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLL 213

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV GKRLFAGDSV+F+RDE+QQLLLGIRRA+RQP N+SSSVLSSDSMHIG+LAA
Sbjct: 214 TTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAA 273

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAANNSPFT+FYNPRASP+EFV+P AK+ KA++SNQISLGMRFRMMFETEE G RRY
Sbjct: 274 AAHAAANNSPFTIFYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMRRY 333

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
           MGTITGI+DLDPVRWKNSQWRNLQVGWDES AGE+RNRVS+WEIEP+ APFFICP PFF 
Sbjct: 334 MGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPFFG 393

Query: 378 SKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQ----SLPGLSLVQWMNMQ--QNPSL 431
            K PRQ DD++S+++N+FKR MPW+G++  +KD+Q    ++PGLSLVQWMNM   Q+ +L
Sbjct: 394 VKRPRQIDDESSEMENLFKRAMPWLGEEICIKDAQTHNTTMPGLSLVQWMNMNRPQSSTL 453

Query: 432 ANAMQSSYMHSLPGSILQNLNGGL--------SQMPQQNNLQYTGQSLPQQVPQIDQLAK 483
              +QS Y+ SL    +QNL            + + QQN++Q     LPQQV  I++LAK
Sbjct: 454 NTGIQSEYLRSLSNPAMQNLGAAELARQLYVQNHLLQQNSVQLNASKLPQQVQPINELAK 513

Query: 484 LPSTVNPLGSNILPQQPLGDISQQSRQNM-ITQNLPSGPVQAQVLQPQNLV 533
              + N L   I  Q+   ++  Q RQ   + Q +P    Q  ++Q Q ++
Sbjct: 514 GSLSCNQLDVIINQQELKQEVGNQQRQQQPVNQAIPLSQAQTNLVQAQVII 564


>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
 gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
 gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
 gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
          Length = 991

 Score =  714 bits (1844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/547 (71%), Positives = 445/547 (81%), Gaps = 21/547 (3%)

Query: 15  GEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           G G  GEK     IN+ELWHACAGPLV+LP AG+ VVYFPQGHSEQVAASM+KD+D  +P
Sbjct: 34  GSGCEGEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVP 93

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
           +YPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV SY +EAL  S+LALK  +PQTEF
Sbjct: 94  SYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEF 153

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARDLHDN+WTFRHIYRGQ
Sbjct: 154 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQ 213

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           PKRHLLTTGWSLFVSGKRLFAGDSV+F+RDEKQQLLLGIRRANRQP N+SSSVLSSDSMH
Sbjct: 214 PKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMH 273

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           IGILAAAAHAAANNSPFT+FYNPRASP+EFV+P AKY KAV+ NQISLGMRFRMMFETEE
Sbjct: 274 IGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEE 333

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
            GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV APFFIC
Sbjct: 334 LGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFIC 393

Query: 372 PPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQW--MNM 425
           PPPFF +K PRQ DD++S+++N+ KR MPW+G++  +KD Q+    +PGLSLVQW  MNM
Sbjct: 394 PPPFFGAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNM 453

Query: 426 QQNPSLAN-AMQSSYMHSLPGSILQNLNGG-LSQ-------MPQQNNLQYTGQSLPQQVP 476
           QQ+ S AN AMQS Y+ SL    +QNL    LS+       + QQNN+Q+    L QQ+ 
Sbjct: 454 QQSSSFANTAMQSEYLRSLSNPNMQNLGAADLSRQLCLQNQLLQQNNIQFNTPKLSQQMQ 513

Query: 477 QIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQN-MITQNLPSGPVQAQVLQPQNLVQT 535
            +++LAK    +N LG +  PQ+ + D S   RQ   +   LP    Q  + Q Q LVQ 
Sbjct: 514 PVNELAKAGIPLNQLGVSTKPQEQIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQ- 572

Query: 536 SNILQQQ 542
            N +QQQ
Sbjct: 573 -NQMQQQ 578



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 11/147 (7%)

Query: 849 SQNDVHLQQNNSLS-YNPQSTLRDASQDGEV-PVDPRSNIPYGANIDGPLG---SMNPDP 903
           SQND  L QN  +S +N     +DA  D E+   +  +N  +G N DGPLG    +  D 
Sbjct: 721 SQNDGLLHQNFPMSNFNQPQMFKDAPPDAEIHAANTSNNALFGINGDGPLGFPIGLGTDD 780

Query: 904 LLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSIDSTIN 963
            L+ G+      + N+IS+  +  +Y   KDAQQE+SSS+VSQSFG  DMAFNSIDSTIN
Sbjct: 781 FLSNGIDA--AKYENHIST-EIDNSYRIPKDAQQEISSSMVSQSFGASDMAFNSIDSTIN 837

Query: 964 DSSFLNGGPWAPPPQFP-QRMRTYTKV 989
           D  FLN   W  PP  P +RMRT+TKV
Sbjct: 838 DGGFLNRSSW--PPAAPLKRMRTFTKV 862


>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
          Length = 1123

 Score =  714 bits (1843), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/542 (72%), Positives = 443/542 (81%), Gaps = 21/542 (3%)

Query: 20  GEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           GEK     IN+ELWHACAGPLV+LP AG+ VVYFPQGHSEQVAASM+KD+D  +P+YPNL
Sbjct: 1   GEKTKAPAINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNL 60

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTL 136
           PSKL+C+L NVTLHAD ETDEVYAQMTLQPV SY +EAL  S+LALK  +PQTEFFCKTL
Sbjct: 61  PSKLICLLHNVTLHADPETDEVYAQMTLQPVTSYGKEALQLSELALKQARPQTEFFCKTL 120

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARDLHDN+WTFRHIYRGQPKRHL
Sbjct: 121 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHL 180

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWSLFVSGKRLFAGDSV+F+RDEKQQLLLGIRRANRQP N+SSSVLSSDSMHIGILA
Sbjct: 181 LTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILA 240

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
           AAAHAAANNSPFT+FYNPRASP+EFV+P AKY KAV+ NQISLGMRFRMMFETEE GTRR
Sbjct: 241 AAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELGTRR 300

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFF 376
           YMGTITGISDLDPVRWKNSQWRNLQVGWDES AGE+RNRVSIWEIEPV APFFICPPPFF
Sbjct: 301 YMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFF 360

Query: 377 RSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQW--MNMQQNPS 430
            +K PRQ DD++S+++N+ KR MPW+G++  +KD Q+    +PGLSLVQW  MNMQQ+ S
Sbjct: 361 GAKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNMQQSSS 420

Query: 431 LAN-AMQSSYMHSLPGSILQNLNGG-LSQ-------MPQQNNLQYTGQSLPQQVPQIDQL 481
            AN AMQS Y+ SL    +QNL    LS+       + QQNN+Q+    L QQ+  +++L
Sbjct: 421 FANTAMQSEYLRSLSNPNMQNLGAADLSRQLCLQNQLLQQNNIQFNTPKLSQQMQPVNEL 480

Query: 482 AKLPSTVNPLGSNILPQQPLGDISQQSRQN-MITQNLPSGPVQAQVLQPQNLVQTSNILQ 540
           AK    +N LG +  PQ+ + D S   RQ   +   LP    Q  + Q Q LVQ  N +Q
Sbjct: 481 AKAGIPLNQLGVSTKPQEQIHDASNLQRQQPSMNHMLPLSQAQTNLGQAQVLVQ--NQMQ 538

Query: 541 QQ 542
           QQ
Sbjct: 539 QQ 540


>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
          Length = 1086

 Score =  710 bits (1832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/530 (69%), Positives = 424/530 (80%), Gaps = 20/530 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N ELW+ACAGPLV LP AG+ VVYFPQGHSEQVAASM+KD D +IP+YPNL SKL+CIL
Sbjct: 21  VNEELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICIL 80

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLALKSNKPQTEFFCKTLTASDT 141
            +VT+ AD +TDEVYA+MTLQPV +    D+E LL ++LALK  +PQTEFFCKTLTASDT
Sbjct: 81  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDT 140

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSVPRRAAE+IFP LDFS+QPPAQEL ARDLHD IWTFRHIYRGQPKRHLLTTGW
Sbjct: 141 STHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 200

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           SLFVSGKRL AGDSVLFIRD +QQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAAAHA
Sbjct: 201 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 260

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
           AANNS FTVFYNPRASPSEFV+P AKY KAV+SNQ+SLGMRFRMMFETEES TRRYMGTI
Sbjct: 261 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 320

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
           TGISD+DP+RWKNSQWRN+QV WDE+   E+R RVS+WE+EPV APFFI P P F +K P
Sbjct: 321 TGISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPLFTAKRP 380

Query: 382 RQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQWMNMQQNPSLAN- 433
           RQ    DDD+S++DN+FKRTMPW G++ G +D  +    +PGLSLVQWMNMQ NPSLAN 
Sbjct: 381 RQPGVTDDDSSEMDNLFKRTMPWFGEEVGKRDLSTQNGLVPGLSLVQWMNMQHNPSLANT 440

Query: 434 AMQSSYMHSLPGSILQNLNGG-LS-------QMPQQNNLQYTGQSLPQQVPQIDQLAKLP 485
            MQ   ++SL G  +Q L    LS       Q  QQNN+Q+    LP Q  Q +QLA + 
Sbjct: 441 VMQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQQNNIQFNTSLLPPQNQQTEQLANVI 500

Query: 486 STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQT 535
           +T N LGS I+PQ+ + + S + +QN++TQ L        V QPQ LV T
Sbjct: 501 ATPNQLGSVIVPQKAVQNSSSEQKQNLVTQPLQVSQPMVSVAQPQ-LVHT 549


>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
          Length = 1149

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/533 (67%), Positives = 427/533 (80%), Gaps = 19/533 (3%)

Query: 20  GEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GE+K   IN +LW+ACAGPLV+LP  G+ VVYFPQGHSEQVAASM+KDID  +P+YPNLP
Sbjct: 34  GERKAPAINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLP 93

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
           SKL+C+L +VTLHAD +TDEVYAQMTLQPV +Y +EAL  S+LALK  +PQ EFFCKTLT
Sbjct: 94  SKLICLLHSVTLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKHARPQMEFFCKTLT 153

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEKI PPLDF MQPPAQEL ARD+HDN+WTFRHI+RGQPKRHLL
Sbjct: 154 ASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLL 213

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV GKRLFAGDSV+F+RDE+QQLLLGIRRA+RQP N+SSSVLSSDSMHIG+LAA
Sbjct: 214 TTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMHIGVLAA 273

Query: 258 AAHAAANNSPFTVFYNPR--ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           AAHAAANNSPFT+FYNPR  ASP+EFV+P AK+ KA++SNQISLGMRFRMMFETEE G R
Sbjct: 274 AAHAAANNSPFTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELGMR 333

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           RYMGTITGI+DLDPVRWKNSQWRNLQVGWDES AGE+RNRVS+WEIEP+ APFFICP PF
Sbjct: 334 RYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPF 393

Query: 376 FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQ----SLPGLSLVQWMNMQ--QNP 429
           F  K PRQ DD++S+++N+FKR MPW+G++  +KD+Q    ++PGLSLVQWMNM   Q+ 
Sbjct: 394 FGVKRPRQIDDESSEMENLFKRAMPWLGEEICIKDAQTHNTTMPGLSLVQWMNMNRPQSS 453

Query: 430 SLANAMQSSYMHSLPGSILQNLNGGL--------SQMPQQNNLQYTGQSLPQQVPQIDQL 481
           +L   +QS Y+ SL    +QNL            + + QQN++Q     LPQQV  I++L
Sbjct: 454 TLNTGIQSEYLRSLSNPAMQNLGAAELARQLYVQNHLLQQNSVQLNASKLPQQVQPINEL 513

Query: 482 AKLPSTVNPLGSNILPQQPLGDISQQSRQNM-ITQNLPSGPVQAQVLQPQNLV 533
           AK   + N L   I  Q+   ++  Q RQ   + Q +P    Q  ++Q Q ++
Sbjct: 514 AKGSLSCNQLDVIINQQELKQEVGNQQRQQQPVNQAIPLSQAQTNLVQAQVII 566


>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
 gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
          Length = 1095

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/530 (69%), Positives = 421/530 (79%), Gaps = 20/530 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N ELW+ACAGPLV LP AG+ VVYFPQGHSEQVAASM+KD D +IP+YPNLPSKL+CIL
Sbjct: 24  VNQELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICIL 83

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLALKSNKPQTEFFCKTLTASDT 141
            +VT+ AD +TDEVYA+MTLQPV +    D+E LL SDLALK  +PQTEFFCKTLTASDT
Sbjct: 84  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQTRPQTEFFCKTLTASDT 143

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSVPRRAAE+IFP LDFSMQPPAQEL ARDLHD IWTFRHIYRGQPKRHLLTTGW
Sbjct: 144 STHGGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 203

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           SLFVSGKRL AGDSVLFIRD +QQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAAAHA
Sbjct: 204 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 263

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
           AANNS FTVFYNPRASPSEFV+P AKY KAV+SNQ+SLGMRFRMMFETEES TRRYMGTI
Sbjct: 264 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 323

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
           TGISD+DPVRWKNSQWRN+QV WDE+   E+R RVS+WE+EPV APFFI P P F +K P
Sbjct: 324 TGISDMDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIAPFFIYPSPLFTAKRP 383

Query: 382 RQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQWMNMQQNPSL-AN 433
           RQ    DDD+S++D +FKRTMPW G++ G KD  +    +PGLSLVQWMNMQQ  SL + 
Sbjct: 384 RQPGITDDDSSEMDTLFKRTMPWFGEEIGKKDLSTQNSLVPGLSLVQWMNMQQTSSLTST 443

Query: 434 AMQSSYMHSLPGSILQNLNGG-LS-------QMPQQNNLQYTGQSLPQQVPQIDQLAKLP 485
            MQ   ++SL G  +Q L    LS       Q  QQNN+Q+    LP Q  Q +QLA + 
Sbjct: 444 VMQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQQNNIQFNTSLLPPQNQQTEQLANVI 503

Query: 486 STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQT 535
           +T N LGS I+PQ+ + + S + +QN +TQ L        + QPQ LV T
Sbjct: 504 ATPNQLGSVIVPQKVVPNCSSEQKQNPVTQPLQVSQPMISMAQPQ-LVHT 552


>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
          Length = 1085

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/529 (69%), Positives = 423/529 (79%), Gaps = 19/529 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N ELW+ACAGPLV LP AG+ VVYFPQGHSEQVAASM+KD D +IP+YPNL SKL+CIL
Sbjct: 21  VNEELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICIL 80

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLALKSNKPQTEFFCKTLTASDT 141
            +VT+ AD +TDEVYA+MTLQPV +    D+E LL ++LALK  +PQTEFFCKTLTASDT
Sbjct: 81  RSVTMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQTRPQTEFFCKTLTASDT 140

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSVPRRAAE+IFP LDFS+QPPAQEL ARDLHD IWTFRHIYRGQPKRHLLTTGW
Sbjct: 141 STHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTGW 200

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           SLFVSGKRL AGDSVLFIRD +QQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAAAHA
Sbjct: 201 SLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAAAAHA 260

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
           AANNS FTVFYNPRASPSEFV+P AKY KAV+SNQ+SLGMRFRMMFETEES TRRYMGTI
Sbjct: 261 AANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRYMGTI 320

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
           TGISD+DP+RWKNSQWRN+QV WDE+   E+R RVS+WE+EPV APFFI P P F +K P
Sbjct: 321 TGISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPLFTAKRP 380

Query: 382 RQ--ADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQWMNMQQNPSLAN-A 434
           RQ    DD+S++DN+FKRTMPW G++ G +D  +    +PGLSLVQWMNMQ NPSLAN  
Sbjct: 381 RQPGVTDDSSEMDNLFKRTMPWFGEEVGKRDLSTQNGLVPGLSLVQWMNMQHNPSLANTV 440

Query: 435 MQSSYMHSLPGSILQNLNGG-LS-------QMPQQNNLQYTGQSLPQQVPQIDQLAKLPS 486
           MQ   ++SL G  +Q L    LS       Q  QQNN+Q+    LP Q  Q +QLA + +
Sbjct: 441 MQPELLNSLAGKPVQTLAAADLSRQISFQPQFLQQNNIQFNTSLLPPQNQQTEQLANVIA 500

Query: 487 TVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQT 535
           T N LGS I+PQ+ + + S + +QN++TQ L        V QPQ LV T
Sbjct: 501 TPNQLGSVIVPQKAVQNSSSEQKQNLVTQPLQVSQPMVSVAQPQ-LVHT 548


>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
          Length = 1088

 Score =  701 bits (1809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/556 (66%), Positives = 430/556 (77%), Gaps = 27/556 (4%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           M  P ++ G      E  G  +  +N ELW+ACAGPLV LP AG+ VVYFPQGHSEQVAA
Sbjct: 1   MSAPESSCGG----DEEAGMRRSKVNQELWYACAGPLVALPPAGSLVVYFPQGHSEQVAA 56

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSY---DREALLR 117
           SM+KD D QIP+YPNLPSKL+CIL NVT+ AD +TDEVYA+MTLQPV +    D+E LL 
Sbjct: 57  SMRKDADAQIPSYPNLPSKLICILHNVTMEADPDTDEVYARMTLQPVSNVTQCDKEILLA 116

Query: 118 SDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDL 177
           S++ALK ++PQTEFFCKTLTASDTSTHGGFSVPRRAAE+IFP LDFS+QPPAQEL ARDL
Sbjct: 117 SEIALKQSRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPQLDFSLQPPAQELQARDL 176

Query: 178 HDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP 237
           HDN WTFRHI+RGQPKRHLLTTGWSLF+SGKRL AGDSVLFIRD K QLLLGIRRANRQP
Sbjct: 177 HDNTWTFRHIFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDGKHQLLLGIRRANRQP 236

Query: 238 ANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQI 297
            NLSSSVLSSDSMHIG+LAAAAHAAANNS FT+FYNPRASPSEFV+P AKY KAV+SNQ+
Sbjct: 237 TNLSSSVLSSDSMHIGVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYSNQL 296

Query: 298 SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVS 357
           SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWK+SQWR++QV WDE+   E+R RVS
Sbjct: 297 SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKSSQWRSIQVAWDEAAPTERRTRVS 356

Query: 358 IWEIEPVTAPFFICPPPFFRSKHPRQ---ADDDASDLDNVFKRTMPWIGDDFGVKDSQS- 413
           +WEIEPV APFFI P P F +K  RQ    DD+ S++DN+FKRTMPW+G+D   KD  S 
Sbjct: 357 LWEIEPVIAPFFIYPSPLFTAKRARQPGMIDDETSEMDNLFKRTMPWLGEDICKKDLNSQ 416

Query: 414 ---LPGLSLV---QWMNMQQNPSLA-NAMQSSYMHSLPGSILQNLNGG--------LSQM 458
               PGL+LV   QWMNMQQN SLA   MQ   ++SL    +QNL+            Q 
Sbjct: 417 NSIAPGLNLVQSLQWMNMQQNLSLAGTGMQPELLNSLASKHVQNLSAADISRQISFQPQF 476

Query: 459 PQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLP 518
            QQNN+Q+    LPQQ  Q +QLAK+ +  N LG+ ++PQ+   D +   +Q+++TQ+LP
Sbjct: 477 LQQNNIQFNTSLLPQQNQQNEQLAKVIAP-NQLGNIMVPQKVDQDRNSDQKQHVVTQSLP 535

Query: 519 SGPVQAQVLQPQNLVQ 534
            G     + +PQ + Q
Sbjct: 536 GGQASINITRPQLVAQ 551


>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1176

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/529 (70%), Positives = 435/529 (82%), Gaps = 24/529 (4%)

Query: 4   PANTAGAASNS---GEGGGGEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV 58
           P++ AG+A      G G  GEKK   IN++LWHACAGPLV LP AG+ VVYFPQGHSEQV
Sbjct: 13  PSSAAGSAVTVAVPGVGCEGEKKAPAINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQV 72

Query: 59  AASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS 118
           AASM+KD+D  +PNYPNLPSKL+C+L N+TLHAD ETDEVYA+MTLQPV SY +EAL  S
Sbjct: 73  AASMQKDVDAHVPNYPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEALQLS 132

Query: 119 DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLH 178
           +LALK  +PQ EFFCKTLTASDTSTHGGFSVPRR+AEKIFPPLDFSMQPPAQE+ ARDLH
Sbjct: 133 ELALKQARPQNEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLH 192

Query: 179 DNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA 238
           DN+WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSV+F+RDE+QQLLLGIRRANRQP 
Sbjct: 193 DNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPT 252

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS 298
           N+SSSVLSSDSMHIGILAAAAHAAANNSPFT+FYNPRASP+EFV+P AKY KAV+ NQ+S
Sbjct: 253 NISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLS 312

Query: 299 LGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSI 358
           LGMRFRMMFETEE GTRRYMGTITGI+DLDPVRWKNSQWRNLQVGWDES AGE+RNRVSI
Sbjct: 313 LGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSI 372

Query: 359 WEIEPVTAPFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----L 414
           WEIEPV APFFICPPPFF +K PRQ DD++S+++N++KR MPW+G++  +KD Q+    +
Sbjct: 373 WEIEPVAAPFFICPPPFFGAKRPRQLDDESSEMENLWKRAMPWLGEEICIKDPQTQNTIM 432

Query: 415 PGLSLVQW--MNMQQNPSLAN-AMQSSYMHSLPGSILQNLNGGLSQMPQ----------Q 461
           PGLSLVQW  MNMQQ+ S AN AMQS Y+ S+  S +QN+  G S++ +          Q
Sbjct: 433 PGLSLVQWMNMNMQQSSSFANTAMQSEYLRSITNSSMQNI--GSSELSRQLCLQNQLLQQ 490

Query: 462 NNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQ 510
           NN+Q+    LPQQ+   + L+K    +N  G +I  Q+   D S   RQ
Sbjct: 491 NNMQFNSPKLPQQMQPNNDLSKAAVPLNQNGMSIKQQEQTQDASNFQRQ 539


>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1176

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/529 (70%), Positives = 435/529 (82%), Gaps = 24/529 (4%)

Query: 4   PANTAGAASNS---GEGGGGEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV 58
           P++ AG+A      G G  GEKK   IN++LWHACAGPLV LP AG+ VVYFPQGHSEQV
Sbjct: 13  PSSAAGSAVTVAVPGVGCEGEKKAPAINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQV 72

Query: 59  AASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS 118
           AASM+KD+D  +PNYPNLPSKL+C+L N+TLHAD ETDEVYA+MTLQPV SY +EAL  S
Sbjct: 73  AASMQKDVDAHVPNYPNLPSKLICLLHNITLHADLETDEVYARMTLQPVTSYGKEALQLS 132

Query: 119 DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLH 178
           +LALK  +PQ EFFCKTLTASDTSTHGGFSVPRR+AEKIFPPLDFSMQPPAQE+ ARDLH
Sbjct: 133 ELALKQARPQNEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLH 192

Query: 179 DNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA 238
           DN+WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSV+F+RDE+QQLLLGIRRANRQP 
Sbjct: 193 DNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPT 252

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS 298
           N+SSSVLSSDSMHIGILAAAAHAAANNSPFT+FYNPRASP+EFV+P AKY KAV+ NQ+S
Sbjct: 253 NISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLS 312

Query: 299 LGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSI 358
           LGMRFRMMFETEE GTRRYMGTITGI+DLDPVRWKNSQWRNLQVGWDES AGE+RNRVSI
Sbjct: 313 LGMRFRMMFETEELGTRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSI 372

Query: 359 WEIEPVTAPFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----L 414
           WEIEPV APFFICPPPFF +K PRQ DD++S+++N++KR MPW+G++  +KD Q+    +
Sbjct: 373 WEIEPVAAPFFICPPPFFGAKRPRQLDDESSEMENLWKRAMPWLGEEICIKDPQTQNTIM 432

Query: 415 PGLSLVQW--MNMQQNPSLAN-AMQSSYMHSLPGSILQNLNGGLSQMPQ----------Q 461
           PGLSLVQW  MNMQQ+ S AN AMQS Y+ S+  S +QN+  G S++ +          Q
Sbjct: 433 PGLSLVQWMNMNMQQSSSFANTAMQSEYLRSITNSSMQNI--GSSELSRQLCLQNQLLQQ 490

Query: 462 NNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQ 510
           NN+Q+    LPQQ+   + L+K    +N  G +I  Q+   D S   RQ
Sbjct: 491 NNMQFNPPKLPQQMQPNNDLSKAAVPLNQNGMSIKQQEQTQDASNFQRQ 539


>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
          Length = 1141

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/509 (68%), Positives = 409/509 (80%), Gaps = 27/509 (5%)

Query: 20  GEKK--TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GE+K  TIN ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAASM+KD++ Q+PNYPNLP
Sbjct: 23  GERKAATINGELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAQVPNYPNLP 82

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
           SKL+C+L +V L AD +TDEVYAQMTLQPV +Y +EAL  S+LAL+  +PQ EFFCKTLT
Sbjct: 83  SKLICLLHSVILQADPDTDEVYAQMTLQPVNTYAKEALQLSELALRQARPQMEFFCKTLT 142

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEKIFP LDFS+QPP QEL ARD+HDNIWTFRHI+RGQPKRHLL
Sbjct: 143 ASDTSTHGGFSVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFRGQPKRHLL 202

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFVSGK+LFAGDSV+F+RDEK QLLLGIRRANRQP N+SSSVLSSDSMHIG+LAA
Sbjct: 203 TTGWSLFVSGKKLFAGDSVIFVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAA 262

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAAN+SPFT+FYNPRASP+EFV+P AKY KA++SNQISLGMRFRM  ETEE GTRRY
Sbjct: 263 AAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCETEELGTRRY 322

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
           MGTITGISDLDPVRWK+SQWR+LQVGWDES AGE+RNRVSIWEIEP+ APFFICP PFF 
Sbjct: 323 MGTITGISDLDPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEIEPLAAPFFICPQPFFG 382

Query: 378 SKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQ----SLPGLSLVQWMNM--QQNPSL 431
            K  RQ DD++S+++N++KR MPW+G++  +KD+Q    ++PGLSLVQWMNM  QQ+ SL
Sbjct: 383 VKRSRQLDDESSEMENLWKRAMPWLGEEVCIKDAQTQGATIPGLSLVQWMNMNRQQSSSL 442

Query: 432 AN-AMQSSYMHSLPGSILQNLNGG--------LSQMPQQNNLQYTGQSLPQQVPQIDQLA 482
           A+ +MQS Y+ S     +QN             + + QQNN+      L +Q   ++ L 
Sbjct: 443 ASTSMQSEYLRSASNPAMQNFGAADLARQLYMQNHLLQQNNIHLNSSKLHEQAKPVNDLC 502

Query: 483 KLPSTVNPLGSNILPQQPLGDISQQSRQN 511
           K            LP   LG I +Q  QN
Sbjct: 503 K----------ETLPLDQLGAIRKQQDQN 521


>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
          Length = 1136

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/554 (66%), Positives = 428/554 (77%), Gaps = 38/554 (6%)

Query: 20  GEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV------AASMKKDIDGQIP 71
           GE+K   IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQV      AASM+KD+D  +P
Sbjct: 34  GERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVP 93

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
           +YPNLPSKL+C+L  V LHAD +TDEVYAQMTLQPV +Y +EAL  S+LALK  +PQ EF
Sbjct: 94  SYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQISELALKQARPQMEF 153

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARD+HDN+WTFRHIYRGQ
Sbjct: 154 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQ 213

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           PKRHLLTTGWSLFVSGKRLFAGDSV+ +RDEK QLLLGIRRANRQP N+SSSVLSSDSMH
Sbjct: 214 PKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMH 273

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           IG+LAAAAHAAAN+SPFT+FYNPRASP+EFV+P AKY KA++SNQISLGMRFRMMFETEE
Sbjct: 274 IGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEE 333

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
            GTRRYMGTITGISDLDP            VGWDES AGE+RNRVSIWEIEPV APFF+C
Sbjct: 334 LGTRRYMGTITGISDLDP------------VGWDESAAGERRNRVSIWEIEPVAAPFFLC 381

Query: 372 PPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQ----SLPGLSLVQWMNM-- 425
           P PFF  K PRQ DD+ S+++N+FKR MPW+G++  +KD+Q    + PGLSLVQWMNM  
Sbjct: 382 PQPFFGVKRPRQLDDE-SEMENLFKRAMPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNR 440

Query: 426 QQNPSLAN-AMQSSYMHSLPGSILQNLNGGL--------SQMPQQNNLQYTGQSLPQQVP 476
           QQ+ SLAN A QS Y+ +L    +QNL            + + QQN +Q+    LPQQ+ 
Sbjct: 441 QQSSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQNNLLQQNCIQFNSPKLPQQMQ 500

Query: 477 QIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTS 536
            ++ L+K    +N LG+ I PQ    D     RQ    Q +P    Q+ ++Q Q +VQ +
Sbjct: 501 TMNDLSKAAIPLNQLGAIINPQDQKQDAVNHQRQQNSIQVIPLSQAQSNLVQAQVIVQ-N 559

Query: 537 NILQQQPS-IQNPQ 549
            + QQ+PS  QNPQ
Sbjct: 560 QMQQQKPSPTQNPQ 573


>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
 gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
 gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
          Length = 1096

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/506 (69%), Positives = 407/506 (80%), Gaps = 15/506 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N ELW+ACAGPLV+LP  G+ +VYFPQGHSEQVAASM+KD D QIP+YPNLPSKL+CIL
Sbjct: 5   VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 64

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
            +VT+ AD +TDEVYA+MTLQPV + D+E LL S+LALK  +PQTEFFCKTLTASDTSTH
Sbjct: 65  HSVTMLADPDTDEVYARMTLQPVSNCDKETLLASELALKQTRPQTEFFCKTLTASDTSTH 124

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPRRAAE+IFP LDFSMQPPAQEL ARDLHDN+WTFRHIYRGQPKRHLLTTGWSLF
Sbjct: 125 GGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLF 184

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VSGKRL AGDSVLFIRD KQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAAAHAAAN
Sbjct: 185 VSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAAN 244

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
           NS FT++YNPRAS SEFV+P AKY KAV+ NQ+SLGMRFRMMFETEESGTRRYMGTITGI
Sbjct: 245 NSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGI 304

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR-- 382
           SDLDPVRWK S WRN+QV WDE+   E+R RVS+WEIEP+ APFFI P P F +K PR  
Sbjct: 305 SDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPRLP 364

Query: 383 QADDDASDLDNVFKRTMPWIGDDFGVKD----SQSLPGLSLVQWMNMQQNPSL-ANAMQS 437
              DD +++D + KR MPW+G++   KD    +  +PGL+L QWMNMQ + SL    +Q 
Sbjct: 365 GMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGTVVQP 424

Query: 438 SYMHSLPGSILQNLNGG-LS-------QMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVN 489
             ++SL G  +QNL    LS       Q  QQNN+Q+    +PQQ  Q +QLAK+  T N
Sbjct: 425 ELLNSLSGKPVQNLAAADLSRQISFHPQFLQQNNIQFNTALVPQQNQQTEQLAKVIPTPN 484

Query: 490 PLGSNILPQQPLGDISQQSRQNMITQ 515
            LGS I+PQ+ + D + + RQ+++TQ
Sbjct: 485 QLGSVIIPQKVVQDCNSEQRQHVVTQ 510


>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
 gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
          Length = 1113

 Score =  689 bits (1778), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/506 (69%), Positives = 406/506 (80%), Gaps = 15/506 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N ELW+ACAGPLV+LP  G+ +VYFPQGHSEQVAASM+KD D QIP+YPNLPSKL+CIL
Sbjct: 22  VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
            +VT+ AD +TDEVYA+MTLQPV   D+E LL S+LALK  +PQTEFFCKTLTASDTSTH
Sbjct: 82  HSVTMLADPDTDEVYARMTLQPVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTH 141

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPRRAAE+IFP LDFSMQPPAQEL ARDLHDN+WTFRHIYRGQPKRHLLTTGWSLF
Sbjct: 142 GGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLF 201

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VSGKRL AGDSVLFIRD KQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAAAHAAAN
Sbjct: 202 VSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAAN 261

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
           NS FT++YNPRAS SEFV+P AKY KAV+ NQ+SLGMRFRMMFETEESGTRRYMGTITGI
Sbjct: 262 NSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGI 321

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR-- 382
           SDLDPVRWK S WRN+QV WDE+   E+R RVS+WEIEP+ APFFI P P F +K PR  
Sbjct: 322 SDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPRLP 381

Query: 383 QADDDASDLDNVFKRTMPWIGDDFGVKD----SQSLPGLSLVQWMNMQQNPSL-ANAMQS 437
              DD +++D + KR MPW+G++   KD    +  +PGL+L QWMNMQ + SL    +Q 
Sbjct: 382 GMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGTVVQP 441

Query: 438 SYMHSLPGSILQNLNGG-LS-------QMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVN 489
             ++SL G  +QNL    LS       Q  QQNN+Q+    +PQQ  Q +QLAK+  T N
Sbjct: 442 ELLNSLSGKPVQNLAAADLSRQISFHPQFLQQNNIQFNTALVPQQNQQTEQLAKVIPTPN 501

Query: 490 PLGSNILPQQPLGDISQQSRQNMITQ 515
            LGS I+PQ+ + D + + RQ+++TQ
Sbjct: 502 QLGSVIIPQKVVQDCNSEQRQHVVTQ 527


>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
 gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
          Length = 1120

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/493 (72%), Positives = 401/493 (81%), Gaps = 20/493 (4%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P N  G   NSGEG   E+KTIN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPNN--GYMPNSGEG---ERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IP+YPNLPSKL+C+L NV LHAD ETDEVYAQMTLQPV  YD++A+L SD 
Sbjct: 56  SMQKQTDF-IPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKDAILASDF 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+A+DLHDN
Sbjct: 115 GLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            W FRHIYRGQPKRHLLTTGWS+F+S KRLFAGDSVLFIRDEKQQLLLG+RRANRQ   L
Sbjct: 175 TWAFRHIYRGQPKRHLLTTGWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHAAANNSPFT++YNPRASPSEFVVPLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHAAANNSPFTIYYNPRASPSEFVVPLAKYNKAMYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGT+TGISDLDPVRWKNSQWRNLQVGWDESTAGE+ +RVSIW+
Sbjct: 294 MRFRMMFETEESGVRRYMGTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWD 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR   P      DD SD++N FKR MPW+GDDFG+KD+ S   PG
Sbjct: 354 IEPVVTPFYICPPPFFRQNFPGHPGMPDDGSDVENSFKRAMPWLGDDFGMKDASSSVFPG 413

Query: 417 LSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQ-NLNGG-----LS-QMPQQN--NLQYT 467
           LSLVQWM+MQQ    + A    +   L  + L  NL+       LS Q P  +  NLQ+ 
Sbjct: 414 LSLVQWMSMQQKNQFSGAQSGCFPSMLSSNTLHSNLSTDDPSKLLSFQAPALSAPNLQFN 473

Query: 468 GQSLPQQVPQIDQ 480
             +LP Q+ Q+ Q
Sbjct: 474 KPNLPNQINQLQQ 486


>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
          Length = 1116

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/509 (68%), Positives = 407/509 (79%), Gaps = 18/509 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N ELW+ACAGPLV+LP  G+ +VYFPQGHSEQVAASM+KD D QIP+YPNLPSKL+CIL
Sbjct: 22  VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLALKSNKPQTEFFCKTLTASDT 141
            +VT+ AD +TDEVYA+MTLQPV +    D+E LL S+LALK  +PQTEFFCKTLTASDT
Sbjct: 82  HSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDT 141

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSVPRRAAE+IFP LDFSMQPPAQEL ARDLHDN+WTFRHIYRGQPKRHLLTTGW
Sbjct: 142 STHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGW 201

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           SLFVSGKRL AGDSVLFIRD KQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAAAHA
Sbjct: 202 SLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHA 261

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
           AANNS FT++YNPRAS SEFV+P AKY KAV+ NQ+SLGMRFRMMFETEESGTRRYMGTI
Sbjct: 262 AANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTI 321

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
           TGISDLDPVRWK S WRN+QV WDE+   E+R RVS+WEIEP+ APFFI P P F +K P
Sbjct: 322 TGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRP 381

Query: 382 R--QADDDASDLDNVFKRTMPWIGDDFGVKD----SQSLPGLSLVQWMNMQQNPSL-ANA 434
           R     DD +++D + KR MPW+G++   KD    +  +PGL+L QWMNMQ + SL    
Sbjct: 382 RLPGMTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGTV 441

Query: 435 MQSSYMHSLPGSILQNLNGG-LS-------QMPQQNNLQYTGQSLPQQVPQIDQLAKLPS 486
           +Q   ++SL G  +QNL    LS       Q  QQNN+Q+    +PQQ  Q +QLAK+  
Sbjct: 442 VQPELLNSLSGKPVQNLAAADLSRQISFHPQFLQQNNIQFNTALVPQQNQQTEQLAKVIP 501

Query: 487 TVNPLGSNILPQQPLGDISQQSRQNMITQ 515
           T N LGS I+PQ+ + D + + RQ+++TQ
Sbjct: 502 TPNQLGSVIIPQKVVQDCNSEQRQHVVTQ 530


>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
 gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
           Full=Auxin-responsive protein IAA22
 gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
 gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
 gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
 gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
 gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 1086

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/438 (77%), Positives = 380/438 (86%), Gaps = 11/438 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N    +SN GE     KK IN++LWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSNGFLPSSNEGE-----KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IPNYPNLPSKL+C+L +VTLHADTETDEVYAQMTLQPV  YDREALL SD+
Sbjct: 56  SMQKQTDF-IPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++A+DLHD 
Sbjct: 115 GLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDT 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLF+RDEK QL+LGIRRANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHA AN+SPFT+F+NPRASPSEFVVPLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYA-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETE+ G RRYMGT+TGISDLDPVRWK SQWRNLQVGWDESTAG++ +RVSIWE
Sbjct: 294 MRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K+PRQ    DD  D++N FKR MPW+G+DFG+KD+QS   PG
Sbjct: 354 IEPVITPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEDFGMKDAQSSMFPG 413

Query: 417 LSLVQWMNMQQNPSLANA 434
           LSLVQWM+MQQN  L+ +
Sbjct: 414 LSLVQWMSMQQNNPLSGS 431


>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
 gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
          Length = 952

 Score =  681 bits (1756), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/431 (76%), Positives = 372/431 (86%), Gaps = 10/431 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAASM K++D  IP+YP+LPSK
Sbjct: 16  GEKKPINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-TIPSYPSLPSK 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C LL++TLHAD+ETDEVYAQMTLQPV  YDR+A+L S+L LK NK  TEFFCKTLTAS
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTAS 134

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEKIFPPLDF+MQPPAQEL+A+DLHD  W FRHIYRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTT 194

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFIRDEK QLLLGIRRA+R    LSSSVLS DSMHIGILAAAA
Sbjct: 195 GWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCDSMHIGILAAAA 254

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAAN+SPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLGMRFRM+FETE+SG RRYMG
Sbjct: 255 HAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYT-QVSLGMRFRMLFETEDSGVRRYMG 313

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TITGI DLDP+RWKNS WRNLQVGWDESTA E+R RVSIWEIEPV  PF+ICPPPFFR K
Sbjct: 314 TITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPK 373

Query: 380 HPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWMNMQQNPSL---- 431
            P+Q    DD S++++ FKR MPW+ DDF +KD Q+   PGLSLVQWM MQQNP +    
Sbjct: 374 LPKQPGMPDDESEVESAFKRAMPWLADDFALKDVQNALFPGLSLVQWMAMQQNPQMLATA 433

Query: 432 ANAMQSSYMHS 442
           A A+QS Y+ S
Sbjct: 434 APAVQSQYLTS 444



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 113/261 (43%), Gaps = 64/261 (24%)

Query: 739 DNPSCSTSPSTNNCQRLIQPTINS--RTHRSAGIGEEVAQSASALLNPSALETMPSNANL 796
           + PS ST+PS +     I P INS  R H+ +              N   +   P   +L
Sbjct: 637 EEPSSSTAPSGSR----ISP-INSLSRAHQGS-------------RNLPEMPATPQIEHL 678

Query: 797 VKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVCLSQNDVHLQ 856
           ++++  KSD +   +I  ++ +    P  +L      +D LD SS+T S CL ++     
Sbjct: 679 LQEIQCKSDNRIKNDIQGSK-ETVHAPNRHL-----ASDQLDASSAT-SFCLDES----- 726

Query: 857 QNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANIDGPLGSMNPDPLLTKGMMGLGKDF 916
                S+ P         D  V VDPR N     N+D    ++ PD LL++GM       
Sbjct: 727 PREGFSFPP------VCLDNNVQVDPRENFLIAENVD----TLMPDALLSRGM------- 769

Query: 917 SNNISSGAMLANY----ENSKDAQQELSSSIVSQSF-GVPDMAFN---SIDSTINDSSFL 968
               SSG  + N      + +D + ELSS+  S    GVPDM+F    S D  + D    
Sbjct: 770 ----SSGKGICNLPTGQRDHRDVENELSSAAFSSQSFGVPDMSFKPGCSSDVAVADGGMA 825

Query: 969 NGGPWAPPPQFPQRMRTYTKV 989
           + G W       QRMRT+TKV
Sbjct: 826 SQGLWNSQ---TQRMRTFTKV 843


>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
          Length = 1049

 Score =  678 bits (1750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/436 (77%), Positives = 378/436 (86%), Gaps = 11/436 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G   N  EG   EKK IN++LWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSN--GFHPNPAEG---EKKAINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IPNYPNLPSKL+C+L +VTLHADTETDEVYAQMTLQPV  YDREALL SD+
Sbjct: 56  SMQKQTDF-IPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++A+DLHD 
Sbjct: 115 GLKINRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDT 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLF+RDEK QL LGIRRANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHA AN+SPFT+F+NPRASPSEFVVPLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYA-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETE+ G RRYMGT+TGISDLDPVRWK SQWRNLQVGWDESTAG++ +RVSIWE
Sbjct: 294 MRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K+PRQ    DD  D++N FKR MPW+G++FG+KD+QS   PG
Sbjct: 354 IEPVITPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEEFGMKDAQSSMFPG 413

Query: 417 LSLVQWMNMQQNPSLA 432
           LSLVQWM+MQQN  L+
Sbjct: 414 LSLVQWMSMQQNNPLS 429



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 65/113 (57%), Gaps = 25/113 (22%)

Query: 882 PRSNIPYGANIDGPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELS 940
           PR+N+ +  N++    ++NPD L ++      KDF N      ++ NY N+ +D + ELS
Sbjct: 834 PRNNLAFAGNLE----AVNPDALYSQ------KDFQN-----LVVPNYGNAPRDIETELS 878

Query: 941 SSIVSQSFGVPDMAFNSIDST----INDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           S+  SQSFG+P + F S  S     INDS  +NGG W   P   QRMRTYTKV
Sbjct: 879 SA--SQSFGIPSIPFKSGGSNEIGGINDSGIMNGGIW---PNQAQRMRTYTKV 926


>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
 gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
          Length = 1119

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/454 (77%), Positives = 387/454 (85%), Gaps = 11/454 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P N  G  +NS EG   E+K+IN+ELWHACAGPLV LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKVPPN--GFMANSAEG---ERKSINSELWHACAGPLVALPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ D  IP+YPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV  YD+EALL SD+
Sbjct: 56  SMQKETDF-IPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVNKYDKEALLASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK ++  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+ARDLHDN
Sbjct: 115 GLKQSRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEK QLLLGIRRANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHAAANNSPFT+FYNPRASPSEFV+P +KY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKAMYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGISDLDPVRWK SQWRNLQVGWDESTAGE+ +RVSIWE
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGISDLDPVRWKTSQWRNLQVGWDESTAGERPSRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           +EPV  PF+ICPPPFFR K P+Q    DD SD++N FKR MPW+GDDFG+KD+QS   PG
Sbjct: 354 VEPVVTPFYICPPPFFRPKFPKQPGMPDDESDIENAFKRAMPWLGDDFGLKDTQSSIFPG 413

Query: 417 LSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQN 450
           LSLVQWM+MQQN     A    +   LP + L N
Sbjct: 414 LSLVQWMSMQQNNQFPGAQAGFFPSMLPSNTLHN 447


>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
          Length = 1020

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/436 (76%), Positives = 378/436 (86%), Gaps = 11/436 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G   +S EG   EKK IN++LWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSN--GFHPSSAEG---EKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IPNYPNLPSKL+C+L +VTLHADTETDEVYAQMTLQPV  YDREALL SD+
Sbjct: 56  SMQKQTDF-IPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++A+DLHD 
Sbjct: 115 GLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDT 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRL AGDSVLF+RDEK QL L IRRANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLIAGDSVLFVRDEKSQLTLVIRRANRQTPTL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHA ANNSPFT+F+NPRASPSEFVVPLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHANANNSPFTIFFNPRASPSEFVVPLAKYNKALYA-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETE+ G RRYMGT+TG+SDLDPVRWK SQWRNLQVGWDESTAG++ +RVS+WE
Sbjct: 294 MRFRMMFETEDCGVRRYMGTVTGVSDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSVWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K+PRQ    DD  D++N FKR MPW+G++FG+KD+QS   PG
Sbjct: 354 IEPVITPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEEFGMKDAQSSMFPG 413

Query: 417 LSLVQWMNMQQNPSLA 432
           LSLVQWM+MQQN +L+
Sbjct: 414 LSLVQWMSMQQNNTLS 429



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 25/114 (21%)

Query: 883 RSNIPYGANIDGPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS 941
           R+N+ +  N++       PD L ++      K+F N      ++ NY N+ +D + ELSS
Sbjct: 802 RNNLAFAGNLEA---VTTPDALYSQ------KEFQN------LVPNYGNAPRDIETELSS 846

Query: 942 S-IVSQSFGVPDMAFNSIDST----INDSSFLNGGP-WAPPPQFPQRMRTYTKV 989
           + I SQSFG+P + F S  S     +NDS  +NGG  W   P   QRMRTYTKV
Sbjct: 847 AAISSQSFGIPSIPFKSGGSNEIGGVNDSGIMNGGGLW---PNQAQRMRTYTKV 897


>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1096

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/509 (68%), Positives = 400/509 (78%), Gaps = 42/509 (8%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N     SN GE     KK IN++LWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSNGFLPTSNEGE-----KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IPNYPNLPSKL+C+L +VTLHADTETDEVYAQMTLQPV  YDREALL SD+
Sbjct: 56  SMQKQTDF-IPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKYDREALLASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++A+DLHD 
Sbjct: 115 GLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDT 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI--------------RDEKQQL 226
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLF+              RDEK QL
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRIGLSSSHKGTWVCRDEKSQL 234

Query: 227 LLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLA 286
           +LGIRRANRQ   LSSSV+SSDSMHIGILAAAAHA AN+SPFT+F+NPRASPSEF+VPLA
Sbjct: 235 MLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFIVPLA 294

Query: 287 KYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDE 346
           KY KA+++ Q+SLGMRFRMMFETE+ G RRYMGT+TGISDLDPVRWK SQWRNLQVGWDE
Sbjct: 295 KYNKALYA-QVSLGMRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDE 353

Query: 347 STAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGD 404
           STAG++ +RVSIWEIEPV  PF+ICPPPFFR K+PRQ    DD  D++N FKR MPW+G+
Sbjct: 354 STAGDRPSRVSIWEIEPVITPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGE 413

Query: 405 DFGVKDSQS--LPGLSLVQWMNMQQN--------PSLANAMQS-----SYMHSLPGSILQ 449
           DFG+KD+QS   PGLSLVQWM+MQQN        P L +A+ S     ++  + P  +L 
Sbjct: 414 DFGMKDAQSSMFPGLSLVQWMSMQQNNPLSGSATPQLPSALSSYNLPNNFASNDPSKLLN 473

Query: 450 ----NLNGGLSQMPQQNNLQYTGQSLPQQ 474
               NL+   SQ  + N + +  Q +  Q
Sbjct: 474 FQSPNLSSANSQFNKSNTVNHISQQMQAQ 502


>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
          Length = 1084

 Score =  673 bits (1736), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/432 (78%), Positives = 378/432 (87%), Gaps = 11/432 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P N  G  + SGEG   E+K+IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPPN--GFLAGSGEG---ERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ +  +P+YPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV  YD+EALL SDL
Sbjct: 56  SMQKETEC-VPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVSKYDKEALLASDL 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK ++   EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++ARDLHDN
Sbjct: 115 GLKQSRQPVEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEK QLLLGIRRANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+S DSMHIGILAAAAHAAANNSPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISCDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGIS+LD  RWKNSQWRNLQVGWDESTAGE+ +RVSIWE
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF++CPPPFFR K P+Q    DD SD+++ FKR MPW+GDDFG+KD+ S   PG
Sbjct: 354 IEPVVTPFYLCPPPFFRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPG 413

Query: 417 LSLVQWMNMQQN 428
           L+LVQWM+MQQN
Sbjct: 414 LNLVQWMSMQQN 425



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/268 (39%), Positives = 137/268 (51%), Gaps = 59/268 (22%)

Query: 732 GQSVITD-DNPSCSTSPSTNNCQRLIQPTINSRTHRSAGI--GEEVAQSASALLNPSALE 788
             S +TD D PSCSTSPSTNNCQ  +     +R  +   I  G+ V + AS         
Sbjct: 744 AHSGLTDGDAPSCSTSPSTNNCQ--VPSNFLNRNQQGPAILLGDSVVEPAS--------- 792

Query: 789 TMPSNANLVKDLPHKSD--VKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSV 846
                 NLV++L  KSD  +K  V  SK  +Q        L    T TD L+ SSS TS 
Sbjct: 793 ------NLVQELQSKSDIRIKNEVPSSKVPDQ--------LRYKGTVTDQLEASSSATSY 838

Query: 847 CLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANIDGPLGSMNPDPLLT 906
           CL      LQQN +L   P   L     DG+V  +P+SN P+  NIDG    + PD LL+
Sbjct: 839 CLDAGT--LQQNFTL---PTFCL-----DGDVQSNPQSNPPFAVNIDG----LTPDTLLS 884

Query: 907 KGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAFN---SIDST 961
           +G    GKD  N      +L+NY  + +D + ELS+ +I SQSFGVP+M+F    S D  
Sbjct: 885 RGFDS-GKDLQN------LLSNYGGTPRDIETELSTAAISSQSFGVPNMSFKPGCSNDVA 937

Query: 962 INDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           I ++  L+ G W       QRMRTYTKV
Sbjct: 938 ITETGVLSNGLWT---NQAQRMRTYTKV 962


>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/432 (78%), Positives = 378/432 (87%), Gaps = 11/432 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P N  G  + SGEG   E+K+IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPPN--GFLAGSGEG---ERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ +  +P+YPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV  YD+EALL SDL
Sbjct: 56  SMQKETEC-VPSYPNLPSKLICMLHNVTLHADAETDEVYAQMTLQPVSKYDKEALLASDL 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK ++   EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++ARDLHDN
Sbjct: 115 GLKQSRQPVEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEK QLLLGIRRANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+S DSMHIGILAAAAHAAANNSPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISCDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGIS+LD  RWKNSQWRNLQVGWDESTAGE+ +RVSIWE
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF++CPPPFFR K P+Q    DD SD+++ FKR MPW+GDDFG+KD+ S   PG
Sbjct: 354 IEPVVTPFYLCPPPFFRPKFPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPG 413

Query: 417 LSLVQWMNMQQN 428
           L+LVQWM+MQQN
Sbjct: 414 LNLVQWMSMQQN 425



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 39/113 (34%)

Query: 881 DPRSNIPYGANIDGPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYENSKDAQQELS 940
           +P+SN P+  NIDG    + PD LL                            D + ELS
Sbjct: 679 NPQSNPPFAVNIDG----LTPDTLL----------------------------DIETELS 706

Query: 941 SS-IVSQSFGVPDMAFN---SIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           ++ I SQSFGVP+M+F    S D  I ++  L+ G W       QRMRTYTKV
Sbjct: 707 TAAISSQSFGVPNMSFKPGCSNDVAITETGVLSNGLWT---NQAQRMRTYTKV 756


>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
          Length = 1125

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/498 (72%), Positives = 408/498 (81%), Gaps = 29/498 (5%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P N  G   NSGEG   E+KTIN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPPN--GYLPNSGEG---ERKTINSELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ D  IP+YPNLPSKL+C+L NV LHAD ETDEVYAQMTLQPV  YD+EALL SD+
Sbjct: 56  SMQKEADF-IPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEALLASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++A+DLHDN
Sbjct: 115 GLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEKQQLLLGI+RANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHAA+NNSPFT+FYNPRASPSEFV+PLAKY KA+  NQ+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALF-NQVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGI+DLDPVRWKNSQWRNLQVGWDESTAGE+ +RVSIW+
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWD 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K P+Q    DD SD++N FKR MPW+GDD G+KD+ S   PG
Sbjct: 354 IEPVVTPFYICPPPFFRPKFPKQPGMPDDESDIENAFKRAMPWLGDDLGMKDASSSVFPG 413

Query: 417 LSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQN--LNGGLS----------QMP--QQN 462
            SL+QWM+MQQN   + A QS +   +P S+L +  L+G L+          Q P     
Sbjct: 414 FSLMQWMSMQQNNQFS-AAQSGF---IPPSMLSSNALHGNLTTDDPSKLLSFQAPVLSSP 469

Query: 463 NLQYTGQSLPQQVPQIDQ 480
           NLQ+   +L  QV Q+ Q
Sbjct: 470 NLQFNKPNLANQVNQLQQ 487


>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 970

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/461 (73%), Positives = 383/461 (83%), Gaps = 10/461 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK IN+ELWHAC+GPLV +P  G+ VVYFPQGHSEQVAASM K++D  IPNYP+LPSK
Sbjct: 16  GEKKAINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVD-IIPNYPSLPSK 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C LL++TLHAD+ETDEVYAQMTLQPV  YDR+A+L S+L LK NK   EFFCKTLTAS
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQPVEFFCKTLTAS 134

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEKIFPPLDF+MQPPAQELMA+DLHD  W FRHI+RGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKRHLLTT 194

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFIRDEK QLLLGIRRA R    LSSSVLSSDSMHIGILAAAA
Sbjct: 195 GWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAA 254

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAAN+SPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLGMRFRM+FETE+SG RRYMG
Sbjct: 255 HAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYT-QVSLGMRFRMLFETEDSGVRRYMG 313

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TITGI DLDPVRWKNS WRNLQVGWDESTA E+R RVSIWEIEPV  PF+ICPPPFFR K
Sbjct: 314 TITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRPK 373

Query: 380 HPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWMNMQQNPSL---- 431
            P+Q    DD S++D+ FKR MPW+GDDF +KD QS   PGLSLVQWM MQQNP +    
Sbjct: 374 LPKQPGMPDDESEVDSAFKRAMPWLGDDFALKDVQSQLFPGLSLVQWMAMQQNPQMLPAG 433

Query: 432 ANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLP 472
           A A+Q+ Y++S    +   +  G   + ++ N+Q     LP
Sbjct: 434 APAVQAPYLNSSAMGMQDGMGTGNEDLMRRFNMQGQNIGLP 474


>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
          Length = 1131

 Score =  667 bits (1720), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/453 (76%), Positives = 386/453 (85%), Gaps = 11/453 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G   NSGEG   E+KTIN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSN--GYLPNSGEG---ERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ D  IP+YPNLPSKL+C+L NV LHAD ETDEVYAQMTLQPV  Y++EA+L SD+
Sbjct: 56  SMQKEADF-IPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYEKEAILASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLD+SMQPPAQEL+A+DLHDN
Sbjct: 115 GLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            W FRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEKQ LLLGIRRANRQ   L
Sbjct: 175 TWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHAAANNSPFT+FYNPRASPSEFVVPLAKY K  ++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKVTYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGI+DLDPVRWK+SQWRN+QVGWDESTAGE+ +RVSIWE
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGINDLDPVRWKSSQWRNIQVGWDESTAGERPSRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K PRQ    DD SD++N FKR +PW+GDDFG+KD+ S   PG
Sbjct: 354 IEPVVTPFYICPPPFFRPKFPRQPGMPDDESDMENAFKRAVPWLGDDFGMKDASSSIFPG 413

Query: 417 LSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQ 449
            SLVQWM+MQQN  L  A    +   LP + LQ
Sbjct: 414 FSLVQWMSMQQNNQLTAAQSGCFPSMLPFNTLQ 446


>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
 gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
          Length = 1055

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/443 (74%), Positives = 373/443 (84%), Gaps = 12/443 (2%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G++  S   G GEKK IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAASM K++D 
Sbjct: 5   GSSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN 64

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ 128
            IP YP+LPSKL+C LL++TLHAD+ETDEVYAQMTLQPV  YDR+A+L S+L LK NK  
Sbjct: 65  -IPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQP 123

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
            EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDF+MQPPAQEL+A+DLHD  W FRHIY
Sbjct: 124 AEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIY 183

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSS 247
           RGQPKRHLLTTGWS+FVS KRL AGDSVLFIRDEK QLLLGIRRA R QPA  SS + S 
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSD 243

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
            SMHIGILAAAAHAAAN+SPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLGMRFRM+F
Sbjct: 244 -SMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYT-QVSLGMRFRMLF 301

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           ETE+SG RRYMGTITGI DLDPVRWKNS WRNLQVGWDESTA E+R RVSIWEIEPV  P
Sbjct: 302 ETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATP 361

Query: 368 FFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWM 423
           F+ICPPPFFR K P+Q    DD +++++ FKR MPW+ DDF +KD QS   PGLSLVQWM
Sbjct: 362 FYICPPPFFRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQWM 421

Query: 424 NMQQNPSLANA----MQSSYMHS 442
            MQQNP +  A    +QS Y++S
Sbjct: 422 AMQQNPQMLTAASQTVQSPYLNS 444


>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
 gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
          Length = 1055

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/443 (74%), Positives = 372/443 (83%), Gaps = 12/443 (2%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G++  S   G GEKK IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAASM K++D 
Sbjct: 5   GSSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDN 64

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ 128
            IP YP+LPSKL+C LL++TLHAD+ETDEVY QMTLQPV  YDR+A+L S+L LK NK  
Sbjct: 65  -IPGYPSLPSKLICKLLSLTLHADSETDEVYVQMTLQPVNKYDRDAMLASELGLKQNKQP 123

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
            EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDF+MQPPAQEL+A+DLHD  W FRHIY
Sbjct: 124 AEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIY 183

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSS 247
           RGQPKRHLLTTGWS+FVS KRL AGDSVLFIRDEK QLLLGIRRA R QPA  SS + S 
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSD 243

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
            SMHIGILAAAAHAAAN+SPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLGMRFRM+F
Sbjct: 244 -SMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYT-QVSLGMRFRMLF 301

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           ETE+SG RRYMGTITGI DLDPVRWKNS WRNLQVGWDESTA E+R RVSIWEIEPV  P
Sbjct: 302 ETEDSGVRRYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATP 361

Query: 368 FFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWM 423
           F+ICPPPFFR K P+Q    DD +++++ FKR MPW+ DDF +KD QS   PGLSLVQWM
Sbjct: 362 FYICPPPFFRPKLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSALFPGLSLVQWM 421

Query: 424 NMQQNPSLANA----MQSSYMHS 442
            MQQNP +  A    +QS Y++S
Sbjct: 422 AMQQNPQMLTAASQTVQSPYLNS 444


>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
          Length = 1063

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/462 (71%), Positives = 379/462 (82%), Gaps = 12/462 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK IN+ELWHACAGPLV +P  G+ VVYFPQGHSEQVAASM K++D  IPNYP+LPSK
Sbjct: 16  GEKKAINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVD-VIPNYPSLPSK 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C LL++TLHAD+ETDEVYAQMTLQPV  YDR+A+L S+L LK NK   EFFCKTLTAS
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMTLQPVSKYDRDAMLASELGLKQNKQPMEFFCKTLTAS 134

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEKIFPPLDF+MQPPAQELMA+DLHD  W FRHI+RGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRHLLTT 194

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIGILAAA 258
           GWS+FVS KRL AGDSVLFIRDEK QLLLGIRR+ R QPA  SS + S  SMHIGILAAA
Sbjct: 195 GWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSD-SMHIGILAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAAN+SPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLGMRFRM+FETE+SG RRYM
Sbjct: 254 AHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYT-QVSLGMRFRMLFETEDSGVRRYM 312

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTITGI DLDPVRWKNS WRNLQVGWDESTA E+R RVSIWEIEPV  PF+ICPPPFFR 
Sbjct: 313 GTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRP 372

Query: 379 KHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWMNMQQNPSL--- 431
           K P+Q    DD +++++ FKR MPW+ DDF +KD QS   PGLSLVQWM MQQNP +   
Sbjct: 373 KLPKQPGMPDDENEVESAFKRAMPWLADDFALKDVQSQLFPGLSLVQWMAMQQNPQMLPT 432

Query: 432 -ANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLP 472
            A A+QS Y+ S   ++   +  G     ++ N+Q     LP
Sbjct: 433 SAPAVQSPYLTSSALALQDGMGTGNEDPTRRLNIQGQNIGLP 474


>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
 gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
          Length = 1057

 Score =  660 bits (1703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/454 (75%), Positives = 383/454 (84%), Gaps = 11/454 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G   N  EG   E+K IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKVPSN--GFLPNFAEG---ERKCINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ D  IP+YPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV  Y++EALL SD+
Sbjct: 56  SMQKETDF-IPSYPNLPSKLICMLHNVTLHADVETDEVYAQMTLQPVSKYEKEALLASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL+ARDLHDN
Sbjct: 115 GLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEK QLLLGIRRANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHAAANNSPFT+FYNPRASPSEFV+P +KY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKALYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGISD+DPVRWKNSQWRNLQVGWDESTAGE+ +RVSIWE
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGISDMDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKD--SQSLPG 416
           IEPV  PF+I PPPFFR K P+Q    DD SD++N FKR MPW+GD+FG+KD  S   PG
Sbjct: 354 IEPVVTPFYIYPPPFFRPKFPKQPGMPDDDSDIENAFKRAMPWLGDEFGMKDPPSSIFPG 413

Query: 417 LSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQN 450
           LSLVQWM+MQQN          +   +P + L N
Sbjct: 414 LSLVQWMSMQQNNQFPATQSGLFPSMVPSNALHN 447



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/264 (39%), Positives = 141/264 (53%), Gaps = 47/264 (17%)

Query: 732 GQSVITD-DNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNPSALETM 790
            +S ITD + PSCSTSPSTNNCQ   Q  +N R H +  +          L+  SA+E  
Sbjct: 713 ARSSITDGEAPSCSTSPSTNNCQISPQNFLN-RNHLAPAM----------LMGDSAIEPA 761

Query: 791 PSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVCLSQ 850
              +NLV+DL +KS+++  V      ++G    Q    GA T  D L+ SSS TS CL  
Sbjct: 762 ---SNLVQDLQNKSEIR--VKNEFPSSRGL--DQLKYKGAVT--DQLEASSSGTSYCLDA 812

Query: 851 NDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANIDGPLGSMNPDPLLTKGMM 910
            ++  QQN S+   P   L     D +V   PR+++P+ +NID    ++ PD LL++G  
Sbjct: 813 GNI--QQNFSV---PTFGL-----DSDVQSHPRNSLPFASNID----ALAPDTLLSRGYD 858

Query: 911 GLGKDFSNNISSGAMLANYE-NSKDAQQELSSS-IVSQSFGVPDMAFN---SIDSTINDS 965
              KD  N      +LANY   ++D + ELS++ I SQSF VP++ F    S D  IND+
Sbjct: 859 S-QKDLQN------LLANYGGTTRDIETELSTAAISSQSFAVPNIPFKPGCSNDVAINDT 911

Query: 966 SFLNGGPWAPPPQFPQRMRTYTKV 989
             LN G W       QRMRTYTKV
Sbjct: 912 GVLNNGLWTNQTNQTQRMRTYTKV 935


>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
 gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
          Length = 1053

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/432 (76%), Positives = 375/432 (86%), Gaps = 12/432 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAASM K++D  +P+YP+LPSK
Sbjct: 16  GEKKPINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD-TVPSYPSLPSK 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C LL++TLHAD+ETDEVYAQM LQPV  YDR+A+L S+L LK NK  TEFFCKTLTAS
Sbjct: 75  LICKLLSLTLHADSETDEVYAQMMLQPVNKYDRDAMLASELGLKQNKQPTEFFCKTLTAS 134

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEKIFPPLDF+MQPPAQEL+A+DLHD  W FRHIYRGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTT 194

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIGILAAA 258
           GWS+FVS KRL AGDSVLFIRDEK QLLLGIRRA+R QPA  SSSVLSSDSMHIGILAAA
Sbjct: 195 GWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPAL-SSSVLSSDSMHIGILAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAAN+SPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLGMRFRM+FETE+SG RRYM
Sbjct: 254 AHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYT-QVSLGMRFRMLFETEDSGVRRYM 312

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTITGI DLDP+RWKNS WRNLQVGWDESTA E+R RVSIWEIEPV  PF+ICPPPFFR 
Sbjct: 313 GTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFFRP 372

Query: 379 KHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWMNMQQNPSL--- 431
           K P+QA   DD +++++ FKR MPW+ DDF +KD Q+   PGLSLVQWM MQQNP +   
Sbjct: 373 KLPKQAGMPDDENEVESAFKRAMPWLADDFALKDVQNALFPGLSLVQWMAMQQNPQMLAT 432

Query: 432 -ANAMQSSYMHS 442
            + A+QS Y+ S
Sbjct: 433 ASPAVQSQYLTS 444


>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
          Length = 1122

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/498 (71%), Positives = 406/498 (81%), Gaps = 29/498 (5%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P   +G   NSGEG   E+KTIN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPP--SGYLPNSGEG---ERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ D  IP+YPNLPSKL+C+L NV LHAD ETDEVYAQMTLQPV  YD+EA+L SD+
Sbjct: 56  SMQKEADF-IPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYDKEAILASDM 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++A+DLHDN
Sbjct: 115 GLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEKQQLLLGI+RANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHAA+NNSPFT+FYNPRASPSEFV+P AKY KA++ N  SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALY-NHASLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGI+D+DPVRWKNSQWRNLQVGWDESTAGE+ +RVSIW+
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGITDVDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWD 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K P++    DD SD++N FKR MPW+GDD G+KD+ S   PG
Sbjct: 354 IEPVVTPFYICPPPFFRPKFPKEPGMPDDESDIENAFKRAMPWLGDDLGMKDASSSVFPG 413

Query: 417 LSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQN--LNGGLS----------QMP--QQN 462
            SL+QWM+MQQN   + A QS +   +P S+L +  L+G L+          Q P     
Sbjct: 414 FSLMQWMSMQQNNQFS-AAQSGF---IPPSMLSSNALHGNLTTDDPSKLLSFQAPVLSSP 469

Query: 463 NLQYTGQSLPQQVPQIDQ 480
           NLQ+   +L  QV Q+ Q
Sbjct: 470 NLQFNKPNLANQVNQLQQ 487


>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
          Length = 1136

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/453 (75%), Positives = 385/453 (84%), Gaps = 11/453 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G   NSGEG   E+KT+N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSN--GYLPNSGEG---ERKTMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ D  IP+YPNLPSKL+C+L NV LHAD ETDEVYAQMTLQPV  Y++EA+L SD+
Sbjct: 56  SMQKEADF-IPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYEKEAILASDI 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+  TEFFCKTLTASDTSTHGGFSVPRRAAEKI PPLD+SMQPPAQEL+A+DLHDN
Sbjct: 115 GLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKILPPLDYSMQPPAQELVAKDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            W FRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEKQ LLLGIRRANRQ   L
Sbjct: 175 TWAFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHAAANNSPFT+FYNPRASPSEFVVPLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG R YMGTITGISDLDPVRWK+SQWRN+QVGWDESTAGE+  RVSIWE
Sbjct: 294 MRFRMMFETEESGVRGYMGTITGISDLDPVRWKSSQWRNIQVGWDESTAGERPRRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K PRQ    DD SD++N FKR +PW+GDDFG+KD+ S   PG
Sbjct: 354 IEPVVTPFYICPPPFFRPKFPRQPGMPDDESDMENAFKRAVPWLGDDFGMKDASSSIFPG 413

Query: 417 LSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQ 449
            SL+QWM+MQQN  L+ A    +   L  + LQ
Sbjct: 414 FSLMQWMSMQQNNQLSAAQSGCFPSMLSSNTLQ 446


>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
          Length = 1097

 Score =  657 bits (1696), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/432 (79%), Positives = 377/432 (87%), Gaps = 11/432 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G  +NSGEG   E+K IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSN--GFLANSGEG---ERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM K+ D  IPNYPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV  Y++EALL SD+
Sbjct: 56  SMNKETDF-IPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDI 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK ++   EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLD+SMQPPAQEL+ARDLHDN
Sbjct: 115 GLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEK QLLLGIRRANRQ   L
Sbjct: 175 SWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILA+AAHAAANNSPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGISD+D VRWKNSQWRNLQVGWDES AGE+ NRVSIWE
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           +EPV  PF+ICPPPFFR K P+Q    DD SD++N FKR MPW GDDFG+KD+ S   PG
Sbjct: 354 VEPVVTPFYICPPPFFRPKFPKQQGMPDDESDIENAFKRAMPWFGDDFGMKDTPSSIFPG 413

Query: 417 LSLVQWMNMQQN 428
           LSLVQWM+MQ N
Sbjct: 414 LSLVQWMSMQHN 425


>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
          Length = 1081

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/432 (79%), Positives = 377/432 (87%), Gaps = 11/432 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G  +NSGEG   E+K IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSN--GFLANSGEG---ERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM K+ D  IPNYPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV  Y++EALL SD+
Sbjct: 56  SMNKETDF-IPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDI 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK ++   EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLD+SMQPPAQEL+ARDLHDN
Sbjct: 115 GLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEK QLLLGIRRANRQ   L
Sbjct: 175 SWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILA+AAHAAANNSPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLG
Sbjct: 235 SSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYT-QVSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGISD+D VRWKNSQWRNLQVGWDES AGE+ NRVSIWE
Sbjct: 294 MRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           +EPV  PF+ICPPPFFR K P+Q    DD SD++N FKR MPW GDDFG+KD+ S   PG
Sbjct: 354 VEPVVTPFYICPPPFFRPKFPKQQGMPDDESDIENAFKRAMPWFGDDFGMKDTPSSIFPG 413

Query: 417 LSLVQWMNMQQN 428
           LSLVQWM+MQ N
Sbjct: 414 LSLVQWMSMQHN 425


>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1164

 Score =  636 bits (1641), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 341/507 (67%), Positives = 398/507 (78%), Gaps = 29/507 (5%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P++  G + N  EG   E++ IN+ELWHACAGPL++LP AG+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSSN-GVSPNPVEG---ERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAA 56

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IP+YPNLPSKL+C+L NVTL+AD ETDEVYAQMTLQPV  YDR+ALL SD+
Sbjct: 57  SMQKQTDF-IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDM 115

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+   EFFCKTLTASDTSTHGGFSVPRRAAEKIFP LDFSMQPP QEL+A+D+HDN
Sbjct: 116 GLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDN 175

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD K QLLLGIRRANRQ   L
Sbjct: 176 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPAL 235

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIG+LAAAAHA ANNSPFT+FYNPRA+P+EFVVPLAKY KA+++ Q+SLG
Sbjct: 236 SSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYA-QVSLG 294

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRM+FETEE G RRYMGT+TGISDLDPVRWKNSQWRNLQ+GWDES AG++ +RVS+W+
Sbjct: 295 MRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWD 354

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR +   Q    DD +D+++  KR MPW+ +   +KD  S   PG
Sbjct: 355 IEPVLTPFYICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPG 414

Query: 417 LSLVQWMNM-QQNPSL-ANAMQSSYMHSL--PGSILQNLNGGLS--------QMPQ---- 460
           LSLVQWMNM QQN  L + A Q  +  S+  P + L N  GG          Q P     
Sbjct: 415 LSLVQWMNMQQQNGQLPSAAAQPGFFPSMLSPTAALHNNLGGTDDPSKLLSFQTPHGGIS 474

Query: 461 QNNLQYTGQSLPQQVPQIDQLAKLPST 487
            +NLQ+  Q+  QQ P + QL + P+T
Sbjct: 475 SSNLQFNKQN--QQAP-MSQLPQPPTT 498



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775  AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
            +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 863  SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 909

Query: 835  DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
            D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 910  DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 957

Query: 894  GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                   PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 958  N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 1007

Query: 952  DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 1008 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 1042


>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
           Full=Auxin-responsive protein IAA21/IAA23/IAA25;
           AltName: Full=Protein BIPOSTO; AltName: Full=Protein
           NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
           TRANSPORT INHIBITOR RESPONSE 5
 gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
 gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
 gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1164

 Score =  636 bits (1640), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 341/507 (67%), Positives = 398/507 (78%), Gaps = 29/507 (5%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P++  G + N  EG   E++ IN+ELWHACAGPL++LP AG+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSSN-GVSPNPVEG---ERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAA 56

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IP+YPNLPSKL+C+L NVTL+AD ETDEVYAQMTLQPV  YDR+ALL SD+
Sbjct: 57  SMQKQTDF-IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDM 115

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+   EFFCKTLTASDTSTHGGFSVPRRAAEKIFP LDFSMQPP QEL+A+D+HDN
Sbjct: 116 GLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDN 175

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD K QLLLGIRRANRQ   L
Sbjct: 176 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPAL 235

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIG+LAAAAHA ANNSPFT+FYNPRA+P+EFVVPLAKY KA+++ Q+SLG
Sbjct: 236 SSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYA-QVSLG 294

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRM+FETEE G RRYMGT+TGISDLDPVRWKNSQWRNLQ+GWDES AG++ +RVS+W+
Sbjct: 295 MRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWD 354

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR +   Q    DD +D+++  KR MPW+ +   +KD  S   PG
Sbjct: 355 IEPVLTPFYICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPG 414

Query: 417 LSLVQWMNM-QQNPSL-ANAMQSSYMHSL--PGSILQNLNGGLS--------QMPQ---- 460
           LSLVQWMNM QQN  L + A Q  +  S+  P + L N  GG          Q P     
Sbjct: 415 LSLVQWMNMQQQNGQLPSAAAQPGFFPSMLSPTAALHNNLGGTDDPSKLLSFQTPHGGIS 474

Query: 461 QNNLQYTGQSLPQQVPQIDQLAKLPST 487
            +NLQ+  Q+  QQ P + QL + P+T
Sbjct: 475 SSNLQFNKQN--QQAP-MSQLPQPPTT 498



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775  AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
            +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 863  SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 909

Query: 835  DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
            D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 910  DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 957

Query: 894  GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                   PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 958  N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 1007

Query: 952  DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 1008 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 1042


>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
 gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
          Length = 1047

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 331/429 (77%), Positives = 367/429 (85%), Gaps = 11/429 (2%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G   NS EG   E+K+IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKVPSN--GFLPNSAEG---ERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K+ D  +P+YPNL SKL+C+L NVTLHAD ETDEVYAQMTLQPV  YD+EALL SDL
Sbjct: 56  SMQKETDF-VPSYPNLTSKLICMLHNVTLHADVETDEVYAQMTLQPVSKYDKEALLASDL 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
             K ++  TEFFCKTLTASDTSTHGGF VPRRAAEKIFPPLDFSMQPPAQEL+ARDLHDN
Sbjct: 115 GQKQSRQPTEFFCKTLTASDTSTHGGFFVPRRAAEKIFPPLDFSMQPPAQELVARDLHDN 174

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KR+F GDSVLFIRDEK QLLLGIR ANRQ   L
Sbjct: 175 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRIFTGDSVLFIRDEKSQLLLGIRHANRQQPAL 234

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSS++SSDSMHIGILAAAAHAAANNSPFT+FYNP ASPSEFV+P +KY KA+++ Q SLG
Sbjct: 235 SSSLISSDSMHIGILAAAAHAAANNSPFTIFYNPSASPSEFVIPFSKYNKAMYT-QGSLG 293

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMF TEESG RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA E+ NRVSIWE
Sbjct: 294 MRFRMMFTTEESGVRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTASERPNRVSIWE 353

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K P+Q    +D SD +N FKR +PW+GD+FG KD+ S   PG
Sbjct: 354 IEPVVTPFYICPPPFFRPKFPKQPGMPNDESDTENAFKRAVPWLGDEFGKKDAASSIFPG 413

Query: 417 LSLVQWMNM 425
           LSLVQWM+M
Sbjct: 414 LSLVQWMSM 422


>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
 gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1150

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 341/508 (67%), Positives = 398/508 (78%), Gaps = 30/508 (5%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P++  G + N  EG   E++ IN+ELWHACAGPL++LP AG+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSSN-GVSPNPVEG---ERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAA 56

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IP+YPNLPSKL+C+L NVTL+AD ETDEVYAQMTLQPV  YDR+ALL SD+
Sbjct: 57  SMQKQTDF-IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDM 115

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+   EFFCKTLTASDTSTHGGFSVPRRAAEKIFP LDFSMQPP QEL+A+D+HDN
Sbjct: 116 GLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDN 175

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD K QLLLGIRRANRQ   L
Sbjct: 176 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPAL 235

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPR-ASPSEFVVPLAKYYKAVHSNQISL 299
           SSSV+SSDSMHIG+LAAAAHA ANNSPFT+FYNPR A+P+EFVVPLAKY KA+++ Q+SL
Sbjct: 236 SSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYA-QVSL 294

Query: 300 GMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIW 359
           GMRFRM+FETEE G RRYMGT+TGISDLDPVRWKNSQWRNLQ+GWDES AG++ +RVS+W
Sbjct: 295 GMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVW 354

Query: 360 EIEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LP 415
           +IEPV  PF+ICPPPFFR +   Q    DD +D+++  KR MPW+ +   +KD  S   P
Sbjct: 355 DIEPVLTPFYICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFP 414

Query: 416 GLSLVQWMNM-QQNPSL-ANAMQSSYMHSL--PGSILQNLNGGLS--------QMPQ--- 460
           GLSLVQWMNM QQN  L + A Q  +  S+  P + L N  GG          Q P    
Sbjct: 415 GLSLVQWMNMQQQNGQLPSAAAQPGFFPSMLSPTAALHNNLGGTDDPSKLLSFQTPHGGI 474

Query: 461 -QNNLQYTGQSLPQQVPQIDQLAKLPST 487
             +NLQ+  Q+  QQ P + QL + P+T
Sbjct: 475 SSSNLQFNKQN--QQAP-MSQLPQPPTT 499



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775  AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
            +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 864  SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 910

Query: 835  DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
            D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 911  DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 958

Query: 894  GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                   PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 959  N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 1008

Query: 952  DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 1009 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 1043


>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
 gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 1165

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 341/508 (67%), Positives = 398/508 (78%), Gaps = 30/508 (5%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P++  G + N  EG   E++ IN+ELWHACAGPL++LP AG+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSSN-GVSPNPVEG---ERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAA 56

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IP+YPNLPSKL+C+L NVTL+AD ETDEVYAQMTLQPV  YDR+ALL SD+
Sbjct: 57  SMQKQTDF-IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDM 115

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+   EFFCKTLTASDTSTHGGFSVPRRAAEKIFP LDFSMQPP QEL+A+D+HDN
Sbjct: 116 GLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDN 175

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD K QLLLGIRRANRQ   L
Sbjct: 176 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPAL 235

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPR-ASPSEFVVPLAKYYKAVHSNQISL 299
           SSSV+SSDSMHIG+LAAAAHA ANNSPFT+FYNPR A+P+EFVVPLAKY KA+++ Q+SL
Sbjct: 236 SSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYA-QVSL 294

Query: 300 GMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIW 359
           GMRFRM+FETEE G RRYMGT+TGISDLDPVRWKNSQWRNLQ+GWDES AG++ +RVS+W
Sbjct: 295 GMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVW 354

Query: 360 EIEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LP 415
           +IEPV  PF+ICPPPFFR +   Q    DD +D+++  KR MPW+ +   +KD  S   P
Sbjct: 355 DIEPVLTPFYICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFP 414

Query: 416 GLSLVQWMNM-QQNPSL-ANAMQSSYMHSL--PGSILQNLNGGLS--------QMPQ--- 460
           GLSLVQWMNM QQN  L + A Q  +  S+  P + L N  GG          Q P    
Sbjct: 415 GLSLVQWMNMQQQNGQLPSAAAQPGFFPSMLSPTAALHNNLGGTDDPSKLLSFQTPHGGI 474

Query: 461 -QNNLQYTGQSLPQQVPQIDQLAKLPST 487
             +NLQ+  Q+  QQ P + QL + P+T
Sbjct: 475 SSSNLQFNKQN--QQAP-MSQLPQPPTT 499



 Score = 73.9 bits (180), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775  AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
            +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 864  SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 910

Query: 835  DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
            D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 911  DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 958

Query: 894  GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                   PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 959  N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 1008

Query: 952  DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 1009 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 1043


>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1168

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 328/463 (70%), Positives = 379/463 (81%), Gaps = 15/463 (3%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P++  G + N  EG   E++ IN+ELWHACAGPL++LP AG+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSSN-GVSPNPVEG---ERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAA 56

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IP+YPNLPSKL+C+L NVTL+AD ETDEVYAQMTLQPV  YDR+ALL SD+
Sbjct: 57  SMQKQTDF-IPSYPNLPSKLICMLHNVTLNADPETDEVYAQMTLQPVNKYDRDALLASDM 115

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK N+   EFFCKTLTASDTSTHGGFSVPRRAAEKIFP LDFSMQPP QEL+A+D+HDN
Sbjct: 116 GLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDN 175

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD K QLLLGIRRANRQ   L
Sbjct: 176 TWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPAL 235

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPR-ASPSEFVVPLAKYYKAVHSNQISL 299
           SSSV+SSDSMHIG+LAAAAHA ANNSPFT+FYNPR A+P+EFVVPLAKY KA+++ Q+SL
Sbjct: 236 SSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYA-QVSL 294

Query: 300 GMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIW 359
           GMRFRM+FETEE G RRYMGT+TGISDLDPVRWKNSQWRNLQ+GWDES AG++ +RVS+W
Sbjct: 295 GMRFRMIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVW 354

Query: 360 EIEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LP 415
           +IEPV  PF+ICPPPFFR +   Q    DD +D+++  KR MPW+ +   +KD  S   P
Sbjct: 355 DIEPVLTPFYICPPPFFRPRFSGQPGMLDDETDMESALKRAMPWLDNSLEMKDPSSTIFP 414

Query: 416 GLSLVQWMNM-QQNPSL-ANAMQSSYMHSL--PGSILQNLNGG 454
           GLSLVQWMNM QQN  L + A Q  +  S+  P + L N  GG
Sbjct: 415 GLSLVQWMNMQQQNGQLPSAATQPGFFPSMLSPTAALHNNLGG 457



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775  AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
            +QS  A+L P A   +  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 867  SQSGPAILIPDA--AIDISGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 913

Query: 835  DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
            D+ L+ S+S TS  L   D + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 914  DHQLEASASGTSYGLDGGDNNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 961

Query: 894  GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                   PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 962  N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 1011

Query: 952  DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 1012 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 1046


>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
           from Arabidopsis thaliana gb|AF186466 [Arabidopsis
           thaliana]
          Length = 1062

 Score =  624 bits (1609), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 317/438 (72%), Positives = 359/438 (81%), Gaps = 35/438 (7%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N    +SN GE     KK IN++LWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSNGFLPSSNEGE-----KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM+K  D  IPNYPNLPSKL+C+L +VTLHADTETDEVYAQMTLQPV   +R+       
Sbjct: 56  SMQKQTDF-IPNYPNLPSKLICLLHSVTLHADTETDEVYAQMTLQPVNKLNRQP------ 108

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
                   TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++A+DLHD 
Sbjct: 109 --------TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDT 160

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
            WTFRHIYRG          WS+FVS KRLFAGDSVLF+RDEK QL+LGIRRANRQ   L
Sbjct: 161 TWTFRHIYRG----------WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTL 210

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILAAAAHA AN+SPFT+F+NPRASPSEFVVPLAKY KA+++ Q+SLG
Sbjct: 211 SSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYA-QVSLG 269

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETE+ G RRYMGT+TGISDLDPVRWK SQWRNLQVGWDESTAG++ +RVSIWE
Sbjct: 270 MRFRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWE 329

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           IEPV  PF+ICPPPFFR K+PRQ    DD  D++N FKR MPW+G+DFG+KD+QS   PG
Sbjct: 330 IEPVITPFYICPPPFFRPKYPRQPGMPDDELDMENAFKRAMPWMGEDFGMKDAQSSMFPG 389

Query: 417 LSLVQWMNMQQNPSLANA 434
           LSLVQWM+MQQN  L+ +
Sbjct: 390 LSLVQWMSMQQNNPLSGS 407


>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
          Length = 975

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 353/570 (61%), Positives = 410/570 (71%), Gaps = 62/570 (10%)

Query: 20  GEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GEKK   IN+ELWHACAGPLV+LP AG+ VVYFPQGHSEQ                    
Sbjct: 26  GEKKAPPINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQF------------------- 66

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
                + + +T++ D                 Y +EAL  S+LALK  +PQTEFFCKTLT
Sbjct: 67  -----LDIKLTVNGD----------------QYGKEALQLSELALKQPRPQTEFFCKTLT 105

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE+ ARDLHDN+WTFRHIYRGQPKRHLL
Sbjct: 106 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLL 165

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFVSGKRL AGDSV+F+RDEKQQLLLG RRANRQP N+SSSVLSSDSMHIGILAA
Sbjct: 166 TTGWSLFVSGKRLLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSVLSSDSMHIGILAA 225

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAANNSPFT+FYNPRASP+EFVVP AKY KA++ NQISLGMRFRMMFETEE GTRRY
Sbjct: 226 AAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRRY 285

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
           MGTITGISDLDPVRWKNSQWRN+QVGWDES AGE+RNRVSIWEIEPV APFFICPPPFF 
Sbjct: 286 MGTITGISDLDPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFG 345

Query: 378 SKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS----LPGLSLVQW--MNMQQNPSL 431
           SK PRQ DD++S+++N+ KR MPW+G++  +KD Q+    +PGLSLVQW  MNMQQN   
Sbjct: 346 SKRPRQLDDESSEMENLLKRAMPWLGEEICIKDPQTQNTIMPGLSLVQWMNMNMQQNSFA 405

Query: 432 ANAMQSSYMHSLPGSILQNLN-GGLS-------QMPQQNNLQYTGQSLPQQVPQIDQLAK 483
            +AMQS Y+ SL    +QNL    LS       Q+ QQN++Q++   LPQQ+   ++L+K
Sbjct: 406 NSAMQSEYLRSLSNPNMQNLGVADLSRQLNLQNQILQQNSIQFSSPKLPQQMQLANELSK 465

Query: 484 LPSTVNPLGSNILPQQPLGDISQ-QSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQ- 541
               +N +G    PQ+   D +  Q +Q  + Q LP    Q  ++Q Q  +  S  L Q 
Sbjct: 466 ASLPLNQIGVGTKPQEQTQDPNNLQRQQQSMNQLLPLSQSQTNLVQAQQQLSNSQPLSQQ 525

Query: 542 ----QPSIQNPQLPANLPQNLQQQQQQQHI 567
               Q SIQ P      P    QQ+ QQ +
Sbjct: 526 QTMPQQSIQVPSRATPPPTTTVQQESQQKL 555



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 167/491 (34%), Positives = 244/491 (49%), Gaps = 56/491 (11%)

Query: 538 ILQQQPSIQNPQLPA-NLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQI 596
           I  + P  QN  +P  +L Q +    QQ        Q   +++ L +P  QNL ++D   
Sbjct: 374 ICIKDPQTQNTIMPGLSLVQWMNMNMQQNSFANSAMQSEYLRS-LSNPNMQNLGVADLSR 432

Query: 597 QLHLLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLE---- 652
           QL+L  ++ QQ     S     QQ    +QL ++   L  AS   ++ G  T+  E    
Sbjct: 433 QLNLQNQILQQNSIQFSSPKLPQQ----MQLANE---LSKASLPLNQIGVGTKPQEQTQD 485

Query: 653 ----------MHQVTPTSLPQSNIMS--QQIANSGSLNNVQF-----------SQPPQQP 689
                     M+Q+ P S  Q+N++   QQ++NS  L+  Q            + PP   
Sbjct: 486 PNNLQRQQQSMNQLLPLSQSQTNLVQAQQQLSNSQPLSQQQTMPQQSIQVPSRATPPPTT 545

Query: 690 KLEQQQPGILPQM------PGHMGLPASHIINPVSTAGNSALTGAAGVGQSVITDDNPSC 743
            ++Q+    LPQ         H  +P +  +N +S  G+  +  A G   SV+TD+ PSC
Sbjct: 546 TVQQESQQKLPQKHVGFTDTSHTTIPPTTSVNTISVVGSPLM--ATGATHSVVTDEIPSC 603

Query: 744 STSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNPSALETMPSNANLVKDLPH- 802
           STSPST N   ++QP +  R    + I  E    ++ +  PS+LE + +    +K+LP  
Sbjct: 604 STSPSTANGNHIVQPVL-GRNQLCSMINYEKVPQSTPMSIPSSLEAVTATPRSIKELPKL 662

Query: 803 KSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVCLSQNDVHLQQNNSLS 862
            S+VK SV  SK  N G       L   A  TDY +T+SS TSV LSQ D  L  +  +S
Sbjct: 663 NSNVKQSVMASKLPNAGHVAQN--LTNNAPPTDYPETASSATSVWLSQADGLLHHSFPMS 720

Query: 863 -YNPQSTL-RDASQDGEV-PVDPRSNIPYGANIDGPLG-SMNPDPLLTKGMMGLGKDFSN 918
            +N Q  + + A+ + ++   DP +N  +G N DG LG  M  D  L+ G+      +  
Sbjct: 721 NFNQQQQMFKAAAPETDIQGADPSNNTLFGINGDGQLGFPMGADDFLSNGIDA--SKYQG 778

Query: 919 NISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSIDSTINDSSFLNGGPWAPPPQ 978
           +IS+  +  NY  SKD QQE+SSS+VSQSFG  DMAFNSIDS +ND  F+N   W P P 
Sbjct: 779 HISTD-IDGNYRISKDGQQEISSSMVSQSFGASDMAFNSIDSGMNDGGFVNRTSWPPAPP 837

Query: 979 FPQRMRTYTKV 989
             +RMRT+TKV
Sbjct: 838 L-KRMRTFTKV 847


>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
          Length = 1092

 Score =  601 bits (1550), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 322/432 (74%), Positives = 362/432 (83%), Gaps = 16/432 (3%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P+N  G  +NSGEG   E+K IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSN--GFLANSGEG---ERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAA 55

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL 120
           SM K+ D  IPNYPNLPSKL+C+L NVTLHAD ETDEVYAQMTLQPV  Y++EALL SD+
Sbjct: 56  SMNKETDF-IPNYPNLPSKLICMLHNVTLHADPETDEVYAQMTLQPVNKYEKEALLASDI 114

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
            LK ++   EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPL+ +M      L++  +H N
Sbjct: 115 GLKQSRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLNMNMN--VVILISLQIHKN 172

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
           +     I+ GQPKRHLLTTGWS+FVS KRLFAGDSVLFIRDEK QLLLGIRRANRQ   L
Sbjct: 173 V---HCIFSGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPAL 229

Query: 241 SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
           SSSV+SSDSMHIGILA+AAHAAANNSPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLG
Sbjct: 230 SSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYT-QVSLG 288

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRMMFETEESG RRYMGTITGISD+D VRWKNSQWRNLQVGWDES AGE+ NRVSIWE
Sbjct: 289 MRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWE 348

Query: 361 IEPVTAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPG 416
           +EPV  PF+ICPPPFFR K P+Q    DD SD++N FKR MPW GDDFG+KD+ S   PG
Sbjct: 349 VEPVVTPFYICPPPFFRPKFPKQQGMPDDESDIENAFKRAMPWFGDDFGMKDTPSSIFPG 408

Query: 417 LSLVQWMNMQQN 428
           LSLVQWM+MQ N
Sbjct: 409 LSLVQWMSMQHN 420


>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
 gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
          Length = 1031

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 302/445 (67%), Positives = 350/445 (78%), Gaps = 18/445 (4%)

Query: 89  LHADTETDEVYAQMTLQPVPSY---DREALLRSDLALKSNKPQTEFFCKTLTASDTSTHG 145
           + AD +TDEVYA+MTLQPV +    D+E LL S+LALK  +PQTEFFCKTLTASDTSTHG
Sbjct: 1   MEADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHG 60

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSVPRRAAE+IFP LDFSMQPPAQEL ARDLHDN+WTFRHIYRGQPKRHLLTTGWSLFV
Sbjct: 61  GFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFV 120

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           SGKRL AGDSVLFIRD KQQLLLGIRRANRQP NLSSSVLSSDSMHIGILAAAAHAAANN
Sbjct: 121 SGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANN 180

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           S FT++YNPRAS SEFV+P AKY KAV+ NQ+SLGMRFRMMFETEESGTRRYMGTITGIS
Sbjct: 181 SQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGTITGIS 240

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR--Q 383
           DLDPVRWK S WRN+QV WDE+   E+R RVS+WEIEP+ APFFI P P F +K PR   
Sbjct: 241 DLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTAKRPRLPG 300

Query: 384 ADDDASDLDNVFKRTMPWIGDDFGVKD----SQSLPGLSLVQWMNMQQNPSL-ANAMQSS 438
             DD +++D + KR MPW+G++   KD    +  +PGL+L QWMNMQ + SL    +Q  
Sbjct: 301 MTDDETEMDGLLKRAMPWVGEEICKKDLNIQNSVVPGLNLAQWMNMQHSSSLPGTVVQPE 360

Query: 439 YMHSLPGSILQNLNGG-LS-------QMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNP 490
            ++SL G  +QNL    LS       Q  QQNN+Q+    +PQQ  Q +QLAK+  T N 
Sbjct: 361 LLNSLSGKPVQNLAAADLSRQISFHPQFLQQNNIQFNTALVPQQNQQTEQLAKVIPTPNQ 420

Query: 491 LGSNILPQQPLGDISQQSRQNMITQ 515
           LGS I+PQ+ + D + + RQ+++TQ
Sbjct: 421 LGSVIIPQKVVQDCNSEQRQHVVTQ 445


>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 875

 Score =  576 bits (1485), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 279/411 (67%), Positives = 333/411 (81%), Gaps = 11/411 (2%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV-AASMKKDIDGQIPNYPNLPSK 79
           E++++N+ELWHACAGPLV+LP  G+ VVYFPQGH+EQV AAS +K+ D  IPNYPNLPS+
Sbjct: 4   ERRSLNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSR 63

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C+L NVTLHAD ETDEVYAQMTL PV P+ ++EAL+  D+ ++S +P TE+FCKTLTA
Sbjct: 64  LVCLLDNVTLHADLETDEVYAQMTLIPVLPANEKEALISPDIGMRSRQP-TEYFCKTLTA 122

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFS+PRRAAEK+FPPLD++  PPAQEL ARDLHD  W FRHIYRGQP+RHLLT
Sbjct: 123 SDTSTHGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRHLLT 182

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGD+VLFIRD+K QL LGIRR NRQ   + SSVLSSDSMHIG+LAAA
Sbjct: 183 TGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIGVLAAA 242

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
            HAAA +S FT+FYNPR SPSEFV+P+AKY KA+ S Q+S+GMRFRM+FETEES  RRYM
Sbjct: 243 NHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESSVRRYM 302

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITG+ DLDP+RW NS WR+L+VGWDESTAGE++ RVS+WEIEP+T PF +CPPP  FR
Sbjct: 303 GTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLLCPPPVAFR 362

Query: 378 SKHPRQADDDASDLDNVFKRTMPWIGD-DFGVKDSQSLPGLSLVQWMNMQQ 427
           +K PR   D  S      K++  W GD D GV    +   LS+  WM  QQ
Sbjct: 363 TKRPRGGRDSTS------KKSSFWSGDEDTGVLGGLNFRNLSMDSWMRPQQ 407


>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
          Length = 914

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 290/449 (64%), Positives = 342/449 (76%), Gaps = 22/449 (4%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K++D  IPNYP+LP +
Sbjct: 15  GEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++A L +DL     +P T +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDAFLPADLGTSGKQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHPR---------QADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQ 426
            K P            DDD           + W+ D    ++ QSL   GL +  WM  +
Sbjct: 373 LKRPWPPGLPSLHGNKDDDLG-----MSAPLMWLRDG-ADRNMQSLNFQGLGVSPWMPQR 426

Query: 427 QNPSLANAMQSSYMHSLPGSILQNLNGGL 455
            + SL   MQS    ++  + LQ + GG+
Sbjct: 427 FDSSLL-GMQSDVYQAMAAAALQEMRGGI 454


>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 841

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 289/456 (63%), Positives = 347/456 (76%), Gaps = 15/456 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GGEKK +N+ELWHACAGPLV+LP AGT VVYFPQGHSEQVAA+  ++IDG IPNYP+LP 
Sbjct: 15  GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPP 74

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLT 137
           +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P + +FCKTLT
Sbjct: 75  QLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLSMELGIPSKQP-SNYFCKTLT 133

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLDFS+QPPAQEL+ARDLHD  W FRHI+RGQPKRHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKFRHIFRGQPKRHLL 193

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAA
Sbjct: 194 TTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 253

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FTVFYNPRASPSEFV+PL+KY KAV+  +IS+GMRFRM+FETEES  RRY
Sbjct: 254 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRY 313

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFF--ICPPP 374
           MGTITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  + P  
Sbjct: 314 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 373

Query: 375 FFRSKHP-----RQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNP 429
             R  HP         D+A++   ++ R  P    D G+ +S +  G  ++ WM  + +P
Sbjct: 374 LKRPWHPGTSSLHDGRDEATN-GLMWMRGGP---VDQGL-NSLNFQGAGMLPWMQQRLDP 428

Query: 430 SLANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQ 465
           +L    Q+    ++  + LQNL  G     Q  N Q
Sbjct: 429 TLLGNDQNQQYQAMLAAGLQNLGSGYLMKQQMMNFQ 464


>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
 gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
          Length = 824

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 257/364 (70%), Positives = 306/364 (84%), Gaps = 3/364 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K+  N ELWHACAGPLV+LP+ GT VVYFPQGHSEQVAAS +K+ D  IP+YPNLP  
Sbjct: 19  GVKRGPNPELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPH 78

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C L N+TLHADTETDEVYAQMTLQP+ + ++++ + SDL  ++ +P +E+FCKTLTAS
Sbjct: 79  LVCQLHNITLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQP-SEYFCKTLTAS 137

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFS+PRRAAEK+FPPLDFS QPPAQE++ARDLHD  W FRHIYRGQP+RHLLTT
Sbjct: 138 DTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTT 197

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL  GD+VLFIRDEK QLLLGIRRANRQ A++  S+LS+DSM+IGILAAAA
Sbjct: 198 GWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAA 257

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSN-QISLGMRFRMMFETEESGTRRYM 318
           HA + +S FT+FYNPRASPSEFV+PL+KYY AV++N Q+S GMRFRM FETEESG RR+ 
Sbjct: 258 HANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHT 317

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTI G  DLDPVRW NS WR+L+V WDE  AGEK+ R+S+WEIEP + P+ +C P F FR
Sbjct: 318 GTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEPASTPYLVCSPSFTFR 377

Query: 378 SKHP 381
           SK P
Sbjct: 378 SKRP 381


>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
 gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
          Length = 824

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 257/364 (70%), Positives = 306/364 (84%), Gaps = 3/364 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K+  N ELWHACAGPLV+LP+ GT VVYFPQGHSEQVAAS +K+ D  IP+YPNLP  
Sbjct: 19  GVKRGPNPELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPH 78

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C L N+TLHADTETDEVYAQMTLQP+ + ++++ + SDL  ++ +P +E+FCKTLTAS
Sbjct: 79  LVCQLHNITLHADTETDEVYAQMTLQPMNAQEKDSFMVSDLGRQNRQP-SEYFCKTLTAS 137

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFS+PRRAAEK+FPPLDFS QPPAQE++ARDLHD  W FRHIYRGQP+RHLLTT
Sbjct: 138 DTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLLTT 197

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL  GD+VLFIRDEK QLLLGIRRANRQ A++  S+LS+DSM+IGILAAAA
Sbjct: 198 GWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAAAA 257

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSN-QISLGMRFRMMFETEESGTRRYM 318
           HA + +S FT+FYNPRASPSEFV+PL+KYY AV++N Q+S GMRFRM FETEESG RR+ 
Sbjct: 258 HANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRRHT 317

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTI G  DLDPVRW NS WR+L+V WDE  AGEK+ R+S+WEIEP + P+ +C P F FR
Sbjct: 318 GTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEPASTPYLVCSPSFTFR 377

Query: 378 SKHP 381
           SK P
Sbjct: 378 SKRP 381


>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
 gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
          Length = 849

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 289/452 (63%), Positives = 346/452 (76%), Gaps = 12/452 (2%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV+LP AGT VVYFPQGHSEQV+A+  ++IDGQIPNYP+LP +L+
Sbjct: 20  KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLV 79

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P + +FCKTLTASD
Sbjct: 80  CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGIPSKQP-SNYFCKTLTASD 138

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTG 198

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAAAAH
Sbjct: 199 WSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAH 258

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           A+A NS FTVFYNPRASPSEFV+PL+KY KAV+  +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 259 ASATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRYMGT 318

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           ITGISDLD VRW+NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  F  R K
Sbjct: 319 ITGISDLDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLRLK 377

Query: 380 HPRQADDDASDLDNVFKRT--MPWIGD---DFGVKDSQSLPGLSLVQWMNMQQNPS-LAN 433
            P      +S LD   + T  + W+     D G+ +S +  G  ++ WM  + +P+ L N
Sbjct: 378 RPWHP-GTSSLLDGRDEATNALMWMRGGPADQGL-NSLNFQGAGMLPWMQQRLDPTLLGN 435

Query: 434 AMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQ 465
                Y   L  + +QN+ GG    PQ  N Q
Sbjct: 436 DQNQQYQAMLAAAGMQNMGGGYLMRPQMVNFQ 467


>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
          Length = 895

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 288/454 (63%), Positives = 345/454 (75%), Gaps = 14/454 (3%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           ++AG +  S EG   EKK +N+ELWHACAGPLV+LPA GT VVYFPQGHSEQVAAS  K+
Sbjct: 4   SSAGFSPQSQEG---EKKVLNSELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKE 60

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKS 124
           +D  IPN+P+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L + L    
Sbjct: 61  VDAHIPNHPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLNPQEQKDGYLPAGLG-SP 119

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
           NK  T +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+ARDLHDN W F
Sbjct: 120 NKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKF 179

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANRQ   + SSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSV 239

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMH+G+LAAAAHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+   IS+GMRFR
Sbjct: 240 LSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFR 299

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITGISDLDP RW NS WR+++VGWDESTAGE++ RVS+WE+EP+
Sbjct: 300 MLFETEESSVRRYMGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPL 359

Query: 365 TAPFFICPPPF-FRSKHPRQ----ADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGL 417
           T  F + P PF  R K P      + +   D D      + W+  + G +  QSL  PG+
Sbjct: 360 TT-FPMYPSPFQLRLKRPWTPGLPSFNGMRDDDLGMNSQLVWLQGNNGDRGMQSLNFPGM 418

Query: 418 SLVQWMNMQQNPSLANAMQSSYMHSLPGSILQNL 451
            +  WM  + + S+   +QS    ++  + LQ +
Sbjct: 419 GVTPWMQPRLDASMI-GLQSDMYQAMAAAALQEM 451


>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 411

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 262/365 (71%), Positives = 304/365 (83%), Gaps = 4/365 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVA S +K+ D  IPNYPNL   
Sbjct: 31  GEKR-INSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLRPH 89

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C L NVTLHAD ETD+VYAQM L P    ++E +L  D+ +++ +P TE+FCKTLTAS
Sbjct: 90  LICTLENVTLHADLETDDVYAQMVLIPTQDPEKETMLLPDVVVQNKQP-TEYFCKTLTAS 148

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR-GQPKRHLLT 198
           DTSTHGGFS+PRRAAEK+FP LD++ QPPAQEL+ARDLHD  W FRHIYR GQP+RHLLT
Sbjct: 149 DTSTHGGFSIPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLT 208

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+F+S KRL AGD+VLFIRD+K QLLLGIRRANR    + SSVLSSDSMHIGILAAA
Sbjct: 209 TGWSIFISAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIGILAAA 268

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           +HAA  +S FT+FYNPR SPSEFV+P AKY KAV+S QI++GMRFRMMFETEES  RRYM
Sbjct: 269 SHAAQTSSRFTIFYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEESTVRRYM 328

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GT+TGI DLDPVRW NS WR+L+VGWDESTAGE++ RVS+WEIEP+T PF ICPPP   R
Sbjct: 329 GTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLICPPPIVLR 388

Query: 378 SKHPR 382
           SK  R
Sbjct: 389 SKRAR 393


>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1103

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 276/455 (60%), Positives = 341/455 (74%), Gaps = 26/455 (5%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E+++  +ELWHACAGPLV+LP  G+ VVYFPQGH+EQVAAS +++ +  IPNYP+LPS+L
Sbjct: 70  ERRSPTSELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRL 129

Query: 81  LCILLNVTLH---------------ADTETDEVYAQMTLQPVP-SYDREALLRSDLALKS 124
           +C+L NVTLH               AD ETDEVYAQMTL PVP + ++EAL+  D+ ++S
Sbjct: 130 VCLLDNVTLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPANEKEALMSPDIGIRS 189

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P T++FCKTLTASDTSTHGGFS+PRRAAEK+FPPLD+S  PPAQEL ARDLHD  W F
Sbjct: 190 RQP-TDYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHF 248

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHIYRGQP+RHLLTTGWS+FVS KRL AGD+VLFIRD+K QL LGIRR NRQ   + SSV
Sbjct: 249 RHIYRGQPRRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSV 308

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMHIG+LAAA HAAA +S FT+FYNPR SPSEFV+P+AKY KA+ + Q+S+GMRFR
Sbjct: 309 LSSDSMHIGVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICNLQVSVGMRFR 368

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITG+ DLDP+RW NS WR+L+VGWDESTAGE++ RVS+WEIEP+
Sbjct: 369 MVFETEESSVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPL 428

Query: 365 TAPFFICPPPF-FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKD---SQSLPGLSLV 420
           T PF +CPPP  FR+K P     D  ++D++ K+   W GD     D   + +L    + 
Sbjct: 429 TTPFLLCPPPLTFRAKRPWGGRVD-EEMDSMLKKASFWSGDSGSHMDALGALNLRNFGMS 487

Query: 421 QWMNMQQ---NPSLANAMQSSYMHSLPGSILQNLN 452
            WM   Q    P L  A Q+ Y  +   + LQ + 
Sbjct: 488 SWMRTPQQRVEPGLP-AQQNEYYRAFAAAALQEIR 521


>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 842

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 287/455 (63%), Positives = 341/455 (74%), Gaps = 7/455 (1%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           +G  GEKK +N+ELWHACAGPLV+LP AGT VVYFPQGHSEQVAA+  +++DG IPNYP+
Sbjct: 11  QGHEGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPS 70

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCK 134
           LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P + +FCK
Sbjct: 71  LPPQLVCQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQP-SNYFCK 129

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RGQPKR
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKR 189

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+
Sbjct: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGL 249

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAA NS FTVFYNPRASPSEFV+PL+KY KAV+  ++S+GMRFRM+FETEES  
Sbjct: 250 LAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSV 309

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  
Sbjct: 310 RRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSL 368

Query: 375 F-FRSKHPRQ-ADDDASDLDNVFKRTMPWIGDDFG--VKDSQSLPGLSLVQWMNMQQNPS 430
           F  R K P         D  +     + W+    G    +S +  G  L+ WM  + +P+
Sbjct: 369 FPLRLKRPWHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPWMQQRMDPT 428

Query: 431 LANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQ 465
           L     +    ++  S LQNL  G     Q  N Q
Sbjct: 429 LLGNDHNQQYQAMFASGLQNLGSGDLMRQQMMNFQ 463


>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 896

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/421 (66%), Positives = 329/421 (78%), Gaps = 11/421 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  +++D  IPNYPNLP +
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQ 75

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREA-LLRSDLALKSNKPQTEFFCKTLT 137
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  LL ++L   S +P T +FCKTLT
Sbjct: 76  LICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPSKQP-TNYFCKTLT 134

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD+S QPPAQEL+ARDLHDN W FRHI+RGQPKRHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 194

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAA
Sbjct: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAA 254

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FT+FYNPRASPSEF +PLAKY KAV+  ++S+GMRFRM+FETEES  RRY
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-F 376
           MGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  
Sbjct: 315 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPL 373

Query: 377 RSKHPRQADDDA----SDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPS 430
           R K P  +   +     D D        W+    G +  QSL   GL +  WM  + +PS
Sbjct: 374 RLKRPWPSGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGLGVTPWMQPRLDPS 433

Query: 431 L 431
           +
Sbjct: 434 I 434


>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 891

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/457 (63%), Positives = 346/457 (75%), Gaps = 13/457 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K++D  IPNYP+L  +
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDRE-ALLRSDLALKSNKPQTEFFCKTLT 137
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  LL ++L   S +P T +FCKTLT
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQP-TNYFCKTLT 133

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD++ QPPAQEL+ARDLH N W FRHI+RGQPKRHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLL 193

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAA
Sbjct: 194 TTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAA 253

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRY
Sbjct: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRY 313

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-F 376
           MGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPL 372

Query: 377 RSKHPRQAD----DDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPS 430
           R K P  +         D D      + W+  D G +  QSL   G  L  WM  + + S
Sbjct: 373 RLKRPWPSALPSFHAHKDGDMSINSPLMWLRGDIGDQGIQSLNFQGYGLTPWMQPRLDAS 432

Query: 431 LANAMQSSYMHSLPGSILQNLNG-GLSQMPQQNNLQY 466
           +   +QS+   ++  + LQ L     S+ P Q+ LQ+
Sbjct: 433 ML-GLQSNMQQAIAAASLQELRALDPSKHPAQSLLQF 468


>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 846

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 283/444 (63%), Positives = 338/444 (76%), Gaps = 7/444 (1%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           +G  GEKK +N+ELWHACAGPLV+LP AGT V YFPQGHSEQVAA+  +++DG IPNYP+
Sbjct: 11  QGHEGEKKCLNSELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNREVDGHIPNYPS 70

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCK 134
           LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P + +FCK
Sbjct: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGVPSKQP-SNYFCK 129

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RGQPKR
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKR 189

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+
Sbjct: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGL 249

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAA NS FTVFYNPRASPSEFV+PL+KY KAV+  ++S+GMRFRM+FETEES  
Sbjct: 250 LAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSV 309

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  
Sbjct: 310 RRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSL 368

Query: 375 F-FRSKHPRQ-ADDDASDLDNVFKRTMPWIGDDFG--VKDSQSLPGLSLVQWMNMQQNPS 430
           F  R K P         D  +     + W+    G    +S +  G  L+ WM  + +P+
Sbjct: 369 FPLRLKRPWHPGTSSFHDGRDEATNGLMWLRGGPGDQALNSLNFQGSGLLPWMQQRMDPT 428

Query: 431 LANAMQSSYMHSLPGSILQNLNGG 454
           L     + +  ++  S LQNL  G
Sbjct: 429 LLANDHNQHYQAMFASGLQNLGSG 452


>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
          Length = 836

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/457 (63%), Positives = 346/457 (75%), Gaps = 13/457 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K++D  IPNYP+L  +
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDRE-ALLRSDLALKSNKPQTEFFCKTLT 137
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  LL ++L   S +P T +FCKTLT
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKEVCLLPAELGSPSKQP-TNYFCKTLT 133

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD++ QPPAQEL+ARDLH N W FRHI+RGQPKRHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLL 193

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAA
Sbjct: 194 TTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAA 253

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRY
Sbjct: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRY 313

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-F 376
           MGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPL 372

Query: 377 RSKHPRQAD----DDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPS 430
           R K P  +         D D      + W+  D G +  QSL   G  L  WM  + + S
Sbjct: 373 RLKRPWPSALPSFHAHKDGDMSINSPLMWLRGDIGDQGIQSLNFQGYGLTPWMQPRLDAS 432

Query: 431 LANAMQSSYMHSLPGSILQNLNG-GLSQMPQQNNLQY 466
           +   +QS+   ++  + LQ L     S+ P Q+ LQ+
Sbjct: 433 ML-GLQSNMQQAIAAASLQELRALDPSKHPAQSLLQF 468


>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 908

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/442 (63%), Positives = 340/442 (76%), Gaps = 11/442 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K++D  IPNYP+LP +
Sbjct: 15  GEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++A L ++L + S +P + +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQP-SNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHPR----QADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPSL 431
            K P      +     D D      + W+  D   +  QSL   G+ +  WM  + + S+
Sbjct: 373 LKRPWPPGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVNPWMQPRLDASM 432

Query: 432 ANAMQSSYMHSLPGSILQNLNG 453
              +Q+    ++  + LQ +  
Sbjct: 433 L-GLQTDMYQAMAAAALQEMRA 453


>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 372

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 260/364 (71%), Positives = 310/364 (85%), Gaps = 2/364 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++++N+ELWHACAGPLV+LP  G+ VVYFPQGH EQVAAS +KD D  IPNYP+LPSK
Sbjct: 1   GERRSLNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSK 60

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           ++C+L NVTLHAD ETDEVYAQM L P+   ++EALL  DL + + +P TE+FCKTLTAS
Sbjct: 61  IICLLDNVTLHADPETDEVYAQMILLPIQISEKEALLSPDLEVVNKQP-TEYFCKTLTAS 119

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFS+PRRAAEK+FPPLDF+  PPAQEL+ARDLHD  W FRHIYRGQP+RHLLTT
Sbjct: 120 DTSTHGGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRHLLTT 179

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFIRD+K  LLLGIRRANRQ   + SSVLSSDSMH G+LAAA+
Sbjct: 180 GWSVFVSAKRLQAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFGVLAAAS 239

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAA +S F +FYNPR SPSEFV+PL KY+KA+++ Q ++GMRFRM+FETEES  RRY+G
Sbjct: 240 HAAATSSRFKIFYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESSVRRYVG 299

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITG+ DLDP+RW  S WR+L+VGWDESTAGE+++RVS+WEIEP+T PF +CPPP   RS
Sbjct: 300 TITGLGDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPLTTPFLLCPPPLALRS 359

Query: 379 KHPR 382
           K PR
Sbjct: 360 KRPR 363


>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
          Length = 843

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/456 (62%), Positives = 339/456 (74%), Gaps = 8/456 (1%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           +G  GEKK +N+ELWHACAGPLV+LP AGT VVYFPQGHSEQVAA+  ++IDG IPNYP+
Sbjct: 11  QGHEGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPS 70

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCK 134
           LP +L+C L N+T+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P + +FCK
Sbjct: 71  LPPQLICQLHNITMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQP-SNYFCK 129

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RGQPKR
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKR 189

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+
Sbjct: 190 HLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGL 249

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAA NS FTVFYNPRASPSEFV+PL+KY KAV+  +IS+GMRFRM+FETEES  
Sbjct: 250 LAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSV 309

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  
Sbjct: 310 RRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSL 368

Query: 375 F-FRSKHPRQ-ADDDASDLDNVFKRTMPWIGD---DFGVKDSQSLPGLSLVQWMNMQQNP 429
           F  R K P         D  +     + W+     D G+          ++ WM  + +P
Sbjct: 369 FPLRLKRPWHPGTSSLHDGRDEATNGLMWLRGGPVDQGLNSLNFQGAGGMLPWMQQRLDP 428

Query: 430 SLANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQ 465
           +L    Q+    ++  + LQNL  G     Q  N Q
Sbjct: 429 TLLGNDQNQQYQAMLAAGLQNLGSGYLMKQQLMNFQ 464


>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
 gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
          Length = 827

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 296/479 (61%), Positives = 350/479 (73%), Gaps = 32/479 (6%)

Query: 12  SNSGEGG--GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           S SG GG   GEKK +N+ELWHACAGPLV+LP AG+ VVYFPQGHSEQVAA+  K++D  
Sbjct: 4   STSGLGGQQAGEKKCLNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEVDAH 63

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQ 128
           IPNYP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  L  DL + S +P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMDLGMPSKQP- 122

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
           T +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+ARDLHD  W FRHI+
Sbjct: 123 TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIF 182

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSVLSSD
Sbjct: 183 RGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSD 242

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMHIG+LAAAAHAAA NS FTVFYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FE
Sbjct: 243 SMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRMLFE 302

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
           TEES  RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F
Sbjct: 303 TEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-F 361

Query: 369 FICPPPF-FRSKHPRQ--------ADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGL-- 417
            + P  F  R K P          + D+AS+        + W+    G      LP L  
Sbjct: 362 PMYPSLFPLRLKRPWHPGSPSLLDSRDEASN-------GLMWLR---GGSGEPGLPSLNF 411

Query: 418 --SLVQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGG--LSQ--MPQQNNLQYTGQS 470
             +++ WM  + +P++     +    ++  + +QNL  G  L Q  M  Q   QY  QS
Sbjct: 412 QANMLPWMQQRLDPTMLGNDHNQRYQAMLAAGMQNLGSGDPLRQQFMQLQQPFQYLQQS 470


>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
 gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
          Length = 478

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 283/442 (64%), Positives = 341/442 (77%), Gaps = 12/442 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE + +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K++D  IPNYP+LP +
Sbjct: 15  GENRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++A L ++L   + +P T +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGTPNKQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHPR----QADDDASDLDNVFKRTMPWI-GD-DFGVKDSQSLPGLSLVQWMNMQQNPSL 431
            K P      +     D D      + W+ GD D G++ S +  GL +  WM  + + S+
Sbjct: 373 LKRPWPPGLPSFHGIKDDDLGMNSPLMWLRGDADRGIQ-SMNFQGLGVTPWMQPRVDASM 431

Query: 432 ANAMQSSYMHSLPGSILQNLNG 453
              +Q+    ++  + LQ +  
Sbjct: 432 L-GLQTDMYQAMAAAALQEMRA 452


>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/360 (72%), Positives = 298/360 (82%), Gaps = 3/360 (0%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVA S +K+ D  IPNYPNL   L+C L
Sbjct: 1   INSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTL 60

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
            N+TLHAD ETDEVYAQM L P    D+E +L  D A+  NK  TE+FCKTLTASDTSTH
Sbjct: 61  DNITLHADLETDEVYAQMVLIPSQDPDKETMLLPD-AVVQNKQPTEYFCKTLTASDTSTH 119

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR-GQPKRHLLTTGWSL 203
           GGFS+PRRAAEK+FP LD++ QPPAQEL+ARDLHD  W FRHIYR GQP+RHLLTTGWS+
Sbjct: 120 GGFSIPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTTGWSV 179

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FVS KRL AGD+VLFIRD+K QLLLGIRRANR    + SSVLSSDSMHIGILAAA+HAA 
Sbjct: 180 FVSAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGILAAASHAAQ 239

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITG 323
            +S FT+FYNPR SPSEFV+PLAKY KAV+S Q+++GMRFRM+FETEES  RRYMGT+TG
Sbjct: 240 TSSRFTIFYNPRQSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTVRRYMGTVTG 299

Query: 324 ISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFF-RSKHPR 382
           I DLDPVRW NS WR+L+VGWDESTAGE++ RVS+WEIEP+T PF  CPPP   RSK  R
Sbjct: 300 IGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLSCPPPLASRSKRAR 359


>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 282/442 (63%), Positives = 340/442 (76%), Gaps = 11/442 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K++D  IPNYP+LP +
Sbjct: 15  GEKRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++A L ++L + S +P + +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQP-SNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHPR----QADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPSL 431
            K P      +     D D      + W+  D   +  QSL   G+ +  WM  + + S+
Sbjct: 373 LKRPWPPGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVNPWMQPRLDASM 432

Query: 432 ANAMQSSYMHSLPGSILQNLNG 453
              +Q+    ++  + LQ +  
Sbjct: 433 L-GLQTDMYQAMAAAALQEMRA 453


>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
 gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
          Length = 841

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 285/440 (64%), Positives = 341/440 (77%), Gaps = 12/440 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GGEKK +N+ELWHACAGPLV+LP AGT VVYFPQGHSEQV+A+  ++IDGQIPNYP+LP 
Sbjct: 15  GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPP 74

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLT 137
           +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P T +FCKTLT
Sbjct: 75  QLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQP-TNYFCKTLT 133

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RGQPKRHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 193

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+LAA
Sbjct: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAA 253

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FTVF+NPRASPSEFV+PL+KY KAV+  ++S+GMRFRM+FETEES  RRY
Sbjct: 254 AAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 313

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-F 376
           MGTIT ISD+DPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  F  
Sbjct: 314 MGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPL 372

Query: 377 RSKHPRQADDDASDLDNVFKRT--MPWIG---DDFGVKDSQSLPGLSLVQWMNMQQNPS- 430
           R K P      +S LD   + T  + W+     D G+ ++ +  G  L+ WM  + +P+ 
Sbjct: 373 RLKRPWHP-GTSSFLDGRDEATNGLMWMRGGPGDHGL-NAMNFQGAGLLPWMQPRLDPTL 430

Query: 431 LANAMQSSYMHSLPGSILQN 450
           L N     Y   L  + LQN
Sbjct: 431 LGNDHNQQYQAMLAAAGLQN 450


>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 866

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 285/440 (64%), Positives = 332/440 (75%), Gaps = 18/440 (4%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  +++D  IPNYPNLP +
Sbjct: 16  GEKKCLNSELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQ 75

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREA-LLRSDLALKSNKPQTEFFCKTLT 137
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  LL ++L     +P T +FCKTLT
Sbjct: 76  LICQLHNVTMHADAETDEVYAQMTLQPLSPQEQKEVYLLPAELGTPGKQP-TNYFCKTLT 134

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD+S QPPAQEL+ARDLHDN W FRHI+RGQPKRHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 194

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAA
Sbjct: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAA 254

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES   RY
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVPRY 314

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-F 376
           MGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  
Sbjct: 315 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPL 373

Query: 377 RSKHPRQADDDA----SDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQN-- 428
           R + P  +   +     D D        W+    G +  QSL   GL +  WM  + +  
Sbjct: 374 RLRRPWPSGLPSLYGLKDGDMGIGSPFMWLQGGLGDQGMQSLNFQGLGVTPWMQPRLDAS 433

Query: 429 -----PSLANAMQSSYMHSL 443
                P L  AM SS    +
Sbjct: 434 IPGLQPELYQAMASSAFQEI 453


>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 904

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 277/438 (63%), Positives = 335/438 (76%), Gaps = 9/438 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +++ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  +++DG IPNYP+LP +
Sbjct: 15  GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L N+T+HADTETDEVYAQMTLQP+ P   + A L ++L   S +P T +FCK LTA
Sbjct: 75  LICQLHNLTMHADTETDEVYAQMTLQPLNPQEQKGAYLPAELGTPSKQP-TNYFCKILTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPP QEL+ARDLH N W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLD +RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHPRQAD----DDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLAN 433
            K P            D D     ++ W+ D      S +  G+ +  WM  + +PS+ N
Sbjct: 373 LKRPWPPGLPLFHGLKDDDFGINSSLMWLRDTDRGLPSLNFQGIGVSPWMQPRLDPSMVN 432

Query: 434 AMQSSYMHSLPGSILQNL 451
             QS    ++  + LQ++
Sbjct: 433 -YQSDMYQAMAAAALQDM 449


>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
          Length = 924

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 260/357 (72%), Positives = 302/357 (84%), Gaps = 3/357 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++++N+ELWHACAGPLV LP  G+HVVYFPQGHSEQVAAS  K++D  IPNYPNLP +
Sbjct: 12  GERRSLNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQ 71

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVTL AD ETDEVYAQMTLQP+ P   +E+ L   L   S +P T +FCKTLTA
Sbjct: 72  LICQLHNVTLQADVETDEVYAQMTLQPLNPQEPKESYLAPALGTPSGQP-TNYFCKTLTA 130

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFS+PRRAAEK+FP LDF+ QPP QEL+ARDLHD  W FRHIYRGQPKRHLLT
Sbjct: 131 SDTSTHGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKRHLLT 190

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFIR++K QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 191 TGWSVFVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIGVLAAA 250

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAA+ N  FT+FYNPRASPSEFVVPLAK+ KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 251 AHAASTNCRFTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEESTVRRYM 310

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           GTITGI DLDP RW+NSQWR+++VGWDESTAGE++ RVS+WEIEP+T  F + PPP+
Sbjct: 311 GTITGIGDLDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEPLTT-FLMYPPPY 366


>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
          Length = 836

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 283/451 (62%), Positives = 341/451 (75%), Gaps = 14/451 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GGEKK +N+ELWHACAGPLV+LP AGT VVYFPQGHSEQVAA+  K++DG IPNYPNLP 
Sbjct: 15  GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPP 74

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLT 137
           +L+C L NVT+HAD ETDEVYAQMTLQP+ + + ++  L  +L + S +P T +FCKTLT
Sbjct: 75  QLICQLHNVTMHADVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQP-TNYFCKTLT 133

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+A+DLHD  W FRHI+RGQPKRHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLL 193

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSVLSSDSMHIG+LAA
Sbjct: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FTVFYNPRASPSEFV+PL KY KAV   ++S+GMRFRM+FETEES  RRY
Sbjct: 254 AAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 313

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFF--ICPPP 374
           MGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  + P  
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 373

Query: 375 FFRSKHP--RQADDDASDLDNVFKRTMPWIGDDFGVK--DSQSLPGLSLVQWMNMQQNPS 430
             R  HP      D+  D  N     + W+    G +   S +L  +S + W+  + + S
Sbjct: 374 LKRPWHPGVSSVHDNREDASN----GLMWLRGGVGEQGLHSLNLQSVSSLPWLQQRLDSS 429

Query: 431 LANAMQSSYMHSLPGSILQNLNGGLSQMPQQ 461
           +     +    ++  + + NL GG+  + QQ
Sbjct: 430 MFGNDHNQQYQAMLAAGMPNL-GGVDMLRQQ 459


>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
          Length = 846

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 279/445 (62%), Positives = 334/445 (75%), Gaps = 9/445 (2%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           +G  GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K++DG IPNYP+
Sbjct: 12  QGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPS 71

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCK 134
           LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P T +FCK
Sbjct: 72  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQP-TNYFCK 130

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RGQPKR
Sbjct: 131 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKR 190

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSVLSSDSMHIG+
Sbjct: 191 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGL 250

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAA NS FT+FYNPRASPSEFV+PL+KY KAV   ++S+GMRFRM+FETEES  
Sbjct: 251 LAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSV 310

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T   F   P 
Sbjct: 311 RRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYPS 368

Query: 375 FFRSKHPRQADDDASDLDNVFKRT---MPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNP 429
            F  +  R     AS L +        + W+  + G +  QSL    + +  W   + +P
Sbjct: 369 LFPLRLKRPWHPGASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQTVGMFPWTQQRLDP 428

Query: 430 SLANAMQSSYMHSLPGSILQNLNGG 454
           +      +    ++  + LQNL  G
Sbjct: 429 TFLGNDHNQQYQAMLAAGLQNLGSG 453


>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
          Length = 1474

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 270/360 (75%), Positives = 311/360 (86%), Gaps = 5/360 (1%)

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
           +YPNLPSKL+C+L NVTL+AD ET+EVYAQMTLQPV  YDR+ALL SD+ LK N+   EF
Sbjct: 350 SYPNLPSKLICMLQNVTLNADPETEEVYAQMTLQPVNKYDRDALLASDMGLKINRQPNEF 409

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAEKIFP LDFSMQPP QEL+A+D+HDN WTFRHI+RGQ
Sbjct: 410 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIFRGQ 469

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           PKRHLLTTGWS+FVS KRLFAGDSVLF+RD K QLLLGIRRANRQ   LSSSV+SSDSMH
Sbjct: 470 PKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISSDSMH 529

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           IG+LAAAAHA ANNSPFT+FYNPRA+P+EFVVPLAKY KA+++ Q+SLGMRFRM+FETEE
Sbjct: 530 IGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYA-QVSLGMRFRMIFETEE 588

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
            G RRYMGT+TGISDLDPVRWKNSQWRNLQ+GWDES AG++ +RVS+W+IEPV  PF+IC
Sbjct: 589 CGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTPFYIC 648

Query: 372 PPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWMNMQQ 427
           PPPFFR +   Q    DD +D+++  KR MPW+ +   +KD  S   PGLSLVQWM+MQQ
Sbjct: 649 PPPFFRPRFAGQPGMPDDGTDMESALKRAMPWLDNGLEMKDPSSTIFPGLSLVQWMSMQQ 708



 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 165/228 (72%), Positives = 195/228 (85%), Gaps = 3/228 (1%)

Query: 188 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSS 247
           + GQPKRHLLTTGWS+FVS KRLFAGDSVLF+RD K QLLLGIRRANRQ   LSSSV+SS
Sbjct: 114 FLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISS 173

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
           DSMHIG+LAAAAHA ANNSPFT+FYNPRA+P+EFVVPLAKY KA+++ Q+SLGMRFRM+F
Sbjct: 174 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYA-QVSLGMRFRMIF 232

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           ETEE G RRYMGT+TGISDLDPVRWKNSQWRNLQ+GWDES AG++ +RVS+W+IEPV  P
Sbjct: 233 ETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLTP 292

Query: 368 FFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS 413
           F+ICPPPFFR +   Q    DD +D+++  KR MPW+ +   +KD+ S
Sbjct: 293 FYICPPPFFRPRFAGQPGMPDDGTDMESALKRAMPWLDNGLEMKDASS 340



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/107 (68%), Positives = 88/107 (82%), Gaps = 5/107 (4%)

Query: 1   MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
           MK P++  G + N  EG   E++ IN+ELWHACAGPL++LP AG+ VVYFPQGHSEQVAA
Sbjct: 1   MKAPSSN-GVSPNPMEG---ERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAA 56

Query: 61  SMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV 107
           SM+K  D  IP+YPNLPSKL+C+L NVTL+AD ET+EVYAQMTLQPV
Sbjct: 57  SMQKQTDF-IPSYPNLPSKLICMLQNVTLNADPETEEVYAQMTLQPV 102



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 107/219 (48%), Gaps = 42/219 (19%)

Query: 775  AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
            +QS  A+L P     +  + +LV+DL  KSD++    +   Q              A+ T
Sbjct: 1172 SQSGPAILIPDP--AVDVSGSLVQDLYSKSDMRLKHELVSQQKP-----------KASLT 1218

Query: 835  DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGA-NI 892
            D+ L+ S+S TS  L   + + QQN     +P   L     DG    D R+++  GA N+
Sbjct: 1219 DHQLEASASGTSYGLDGGENNRQQN---FLSPNFGL-----DG----DSRNSLFGGAANV 1266

Query: 893  DGPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGV 950
            +       PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFG+
Sbjct: 1267 EN---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGI 1316

Query: 951  PDMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            P++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 1317 PNVPAISNDIAVNDAGVLGGGLW---PTQTQRMRTYTKV 1352


>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
 gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
 gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
 gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
           Japonica Group]
 gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
           Japonica Group]
 gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
 gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
 gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
 gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 908

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 284/444 (63%), Positives = 335/444 (75%), Gaps = 25/444 (5%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E+K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+++ QIPNYPNLP +L
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   S +P T +FCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQP-TNYFCKTLTAS 141

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQELMA+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 322 TITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRL 380

Query: 379 KHPR----------QADDDASDLDNVFKRTMPWIGD--DFGVKDSQSLPGLSLVQWMNMQ 426
           K P           + DD AS L         W+ D  + G + S +  GL +  WM  +
Sbjct: 381 KRPWPTGLPSLYGGKEDDLASSLM--------WLRDSQNTGFQ-SLNFGGLGMSPWMQPR 431

Query: 427 QNPSLANAMQSSYMHSLPGSILQN 450
            + SL       Y      + LQN
Sbjct: 432 LDSSLLGLQPDMYQTIAAAAALQN 455


>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
          Length = 854

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 287/464 (61%), Positives = 346/464 (74%), Gaps = 15/464 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GGEKK +N+ELWHACAGPLV+LP AGT VVYFPQGHSEQVAA+  K++DG IPNYPNLP 
Sbjct: 15  GGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPP 74

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLT 137
           +L+C L NVT+HA  ETDEVYAQMTLQP+ + + ++  L  +L + S +P T +FCKTLT
Sbjct: 75  QLICQLHNVTMHAVVETDEVYAQMTLQPLTAQEQKDTFLPMELGIPSRQP-TNYFCKTLT 133

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+A+DLHD  W FRHI+RGQPKRHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLL 193

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSVLSSDSMHIG+LAA
Sbjct: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FTVFYNPRASPSEFV+PL KY KAV   ++S+GMRFRM+FETEES  RRY
Sbjct: 254 AAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 313

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFF--ICPPP 374
           MGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  + P  
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLR 373

Query: 375 FFRSKHP--RQADDDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWMNMQQNPS 430
             R  HP      D+  D  N     + W+    G +   S  L  +S + W+  + + S
Sbjct: 374 LKRPWHPGVSSVHDNREDASN----GLMWLRGGVGEQGLHSLNLQSVSSLPWLQQRLDSS 429

Query: 431 LANAMQSSYMHSLPGSILQNLNGGLSQMPQQ-NNLQYTGQSLPQ 473
           +     +    ++  + + NL GG+  + QQ  +LQ   Q +PQ
Sbjct: 430 MFGNDHNQQYQAMLAAGMPNL-GGVDMLRQQIMHLQQPFQYIPQ 472


>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
          Length = 889

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 270/402 (67%), Positives = 320/402 (79%), Gaps = 5/402 (1%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           E   GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D  IPNYP 
Sbjct: 13  EEAAGEKKCLNSELWHACAGPLVSLPPVGSGVVYFPQGHSEQVAASTNKEVDAHIPNYPG 72

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFC 133
           LP +L+C L N+T+HAD ETDEVYAQMTLQP+ + +++   LL ++L + S +P T +FC
Sbjct: 73  LPPQLICQLHNLTMHADVETDEVYAQMTLQPLSAQEQKDVCLLPAELGIPSKQP-TNYFC 131

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLTASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+A+DLH N W FRHI+RGQPK
Sbjct: 132 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPK 191

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS KRL AGD+V+FI +E  QLLLGIRRANR    + SSVLSSDSMHIG
Sbjct: 192 RHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIG 251

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LAAAAHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES 
Sbjct: 252 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESS 311

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP 373
            RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P 
Sbjct: 312 VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS 370

Query: 374 PF-FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL 414
           PF  R K P  +     + D      + W+  D G +  QSL
Sbjct: 371 PFSLRLKRPWPSLPGFPNGDMTMNSPLSWLRGDIGDQGIQSL 412


>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
 gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
          Length = 826

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 280/447 (62%), Positives = 337/447 (75%), Gaps = 13/447 (2%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           +G  GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K++DG IPNYP+
Sbjct: 11  QGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPS 70

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCK 134
           LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P T +FCK
Sbjct: 71  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGMPSKQP-TNYFCK 129

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RGQPKR
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKR 189

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSVLSSDSMHIG+
Sbjct: 190 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGL 249

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAA NS FT+FYNPRASPSEFV+PL+KY KAV   ++S+GMRFRM+FETEES  
Sbjct: 250 LAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSV 309

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFF--IC 371
           RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  + 
Sbjct: 310 RRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLF 369

Query: 372 PPPFFRSKH--PRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQ 427
           P    R  H  P    D+  +  N     + W+    G +   SL    +++  W   + 
Sbjct: 370 PLRLRRPWHPGPSSLHDNRDEAGN----GLMWLRGGTGDQGLHSLNFQAVNMFPWSQQRL 425

Query: 428 NPSLANAMQSSYMHSLPGSILQNLNGG 454
           +P+L    Q+ +  ++  S LQN   G
Sbjct: 426 DPALLGNDQNQWYQAMLASGLQNGGNG 452


>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 895

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 280/434 (64%), Positives = 333/434 (76%), Gaps = 24/434 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE + +++ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  K++D  IPNYP+LP +
Sbjct: 15  GENRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L N+T+HAD ETDEVYAQMTLQP+ P   +EA L ++L   S +P T +FCKTLTA
Sbjct: 75  LICQLHNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLH N W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLDPVRW+NS WR+++VGWDESTAG+++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGISDLDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHPR---------QADDDASDLDNVFKRTMP--WIGD-DFGVKDSQSLPGLSLVQWMNM 425
            K P            DDD       F    P  W+ D D G+  S +  G+ +  WM  
Sbjct: 373 LKRPWPPGLPSFHGMKDDD-------FGPNSPLLWLRDPDRGLP-SLNFQGIGINPWMQP 424

Query: 426 QQNPSLANAMQSSY 439
           + +P++ N     Y
Sbjct: 425 RFDPTMLNMQTDMY 438


>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 897

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/427 (64%), Positives = 330/427 (77%), Gaps = 10/427 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +++ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  K++D  IPNYP+LP +
Sbjct: 15  GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L N+T+HAD ETDEVYAQMTLQP+ P    EA L ++L   S +P T +FCKTLTA
Sbjct: 75  LICQLHNMTMHADVETDEVYAQMTLQPLNPQEQNEAYLPAELGTASKQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLH N W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGI DLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  F  R
Sbjct: 314 GTITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSSFPLR 372

Query: 378 SKHPR----QADDDASDLDNVFKRTMPWIGD-DFGVKDSQSLPGLSLVQWMNMQQNPSLA 432
            K P      +     D D      + W+ D D G++ S +  G+ +  WM  + +P++ 
Sbjct: 373 LKRPWPPGLPSFHGMKDDDFGLNSPLLWLRDTDRGLQ-SLNFQGIGVNPWMQPRFDPTVL 431

Query: 433 NAMQSSY 439
           N     Y
Sbjct: 432 NMQTDMY 438


>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
          Length = 1183

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 288/413 (69%), Positives = 324/413 (78%), Gaps = 48/413 (11%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE+K+IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQ                      
Sbjct: 85  GERKSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQ---------------------- 122

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
                      AD ETDEVYAQMTLQP   YD+EALL SDL LK ++   EFFCKTLTAS
Sbjct: 123 -----------ADAETDEVYAQMTLQP---YDKEALLASDLGLKQSRQPVEFFCKTLTAS 168

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE++ARDLHDN WTFRHIYRGQPKRHLLTT
Sbjct: 169 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTT 228

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRLFAGDSVLFIRDEK QLLLGIRRANRQ   LSSSV+S DSMHIGILAAAA
Sbjct: 229 GWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGILAAAA 288

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAANNSPFT+FYNPRASPSEFV+PLAKY KA+++ Q+SLGMRFRMMFETEESG RRYMG
Sbjct: 289 HAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYT-QVSLGMRFRMMFETEESGVRRYMG 347

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TITGIS+L     +       +    + +AGE+ +RVSIWEIEPV  PF++CPPPFFR K
Sbjct: 348 TITGISELRCCAME-------KFTMAQPSAGERPSRVSIWEIEPVVTPFYLCPPPFFRPK 400

Query: 380 HPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLVQWMNMQQN 428
            P+Q    DD SD+++ FKR MPW+GDDFG+KD+ S   PGL+LVQWM+MQQN
Sbjct: 401 FPKQPGFPDDESDIESAFKRGMPWLGDDFGMKDAPSSIFPGLNLVQWMSMQQN 453



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/268 (39%), Positives = 137/268 (51%), Gaps = 59/268 (22%)

Query: 732  GQSVITD-DNPSCSTSPSTNNCQRLIQPTINSRTHRSAGI--GEEVAQSASALLNPSALE 788
              S +TD D PSCSTSPSTNNCQ  +     +R  +   I  G+ V + AS         
Sbjct: 843  AHSGLTDGDAPSCSTSPSTNNCQ--VPSNFLNRNQQGPAILLGDSVVEPAS--------- 891

Query: 789  TMPSNANLVKDLPHKSD--VKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSV 846
                  NLV++L  KSD  +K  V  SK  +Q        L    T TD L+ SSS TS 
Sbjct: 892  ------NLVQELQSKSDIRIKNEVPSSKVPDQ--------LRYKGTVTDQLEASSSATSY 937

Query: 847  CLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANIDGPLGSMNPDPLLT 906
            CL      LQQN +L   P   L     DG+V  +P+SN P+  NIDG    + PD LL+
Sbjct: 938  CLDAGT--LQQNFTL---PTFCL-----DGDVQSNPQSNPPFAVNIDG----LTPDTLLS 983

Query: 907  KGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAFN---SIDST 961
            +G    GKD  N      +L+NY  + +D + ELS+ +I SQSFGVP+M+F    S D  
Sbjct: 984  RGFDS-GKDLQN------LLSNYGGTPRDIETELSTAAISSQSFGVPNMSFKPGCSNDVA 1036

Query: 962  INDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            I ++  L+ G W       QRMRTYTKV
Sbjct: 1037 ITETGVLSNGLWT---NQAQRMRTYTKV 1061


>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
 gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 279/441 (63%), Positives = 334/441 (75%), Gaps = 12/441 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K++D  IPNYP+LP +
Sbjct: 3   GEKKCLNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQ 62

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  L  DL + S +P T +FCKTLTA
Sbjct: 63  LICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLDLGMPSKQP-TNYFCKTLTA 121

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 122 SDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLT 181

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSVLSSDSMHIG+LAAA
Sbjct: 182 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAA 241

Query: 259 AHAAANNSPFTVFYNPR-ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AHAAA NS FTVFYNPR ASPSEFV+PL+KY KAV   ++S+GMRFRM+FETEES  RRY
Sbjct: 242 AHAAATNSCFTVFYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRRY 301

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
           MGTITG SDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T+  F   P  F 
Sbjct: 302 MGTITGTSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTS--FPMYPSLFP 359

Query: 378 SKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGL----SLVQWMNMQQNPSLAN 433
            +  R     +S L +     + W+    G    Q LP L    +++ WM  + +P++  
Sbjct: 360 LRLKRPWHPGSSSLLDEASNGLIWLR---GGSGEQGLPSLNFQANMLPWMQQRLDPTMLG 416

Query: 434 AMQSSYMHSLPGSILQNLNGG 454
              +    ++  + +QNL GG
Sbjct: 417 NDHNQQYQAMLAAGMQNLGGG 437


>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
 gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
          Length = 908

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 277/439 (63%), Positives = 340/439 (77%), Gaps = 11/439 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +++ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  K++D  IPNYP+LP +
Sbjct: 15  GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L N+T+HAD ETDEVYAQMTLQP+ + + +EA L ++L   S +P T +FCKTLTA
Sbjct: 75  LICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLH N W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRA PSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGI DLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHPR----QADDDASDLDNVFKRTMPWIGD-DFGVKDSQSLPGLSLVQWMNMQQNPSLA 432
            K P      +     D D      + W+ D D G++ S +  G+ +  WM  + +P++ 
Sbjct: 373 LKRPWPPGLPSFHGMKDDDFGMSSPLMWLRDTDRGLQ-SLNYQGIGVNPWMQPRFDPAML 431

Query: 433 NAMQSSYMHSLPGSILQNL 451
           N MQ+    ++  + LQ++
Sbjct: 432 N-MQTDMYQAVAAAALQDM 449


>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
          Length = 838

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 273/444 (61%), Positives = 336/444 (75%), Gaps = 9/444 (2%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
            E G GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQV AS  K+ID  IP+YP
Sbjct: 12  AEEGTGEKKCLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTNKEIDAHIPSYP 71

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFF 132
            LP++L+C L NVT+HAD ETDEVYAQMTLQP+ + +++   LL ++L + S +P T +F
Sbjct: 72  GLPAQLICQLHNVTMHADNETDEVYAQMTLQPLSAQEQKDVCLLPAELGMPSKQP-TNYF 130

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
           CKTLTASDTSTHGGFSVPRRAAEK+FPPLD+S QPPAQEL+A+DLH N W FRH++RGQP
Sbjct: 131 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRHVFRGQP 190

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
           KRHLLTTGWS+FVS KRL AGD+V+FI +E  QLLLGIRRANR    + SSVLSSDSMHI
Sbjct: 191 KRHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHI 250

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
           G+LAAAAHAAA NS FT+FYNPRASPS+FV+PLAKY KAV+  ++S+GMRFRM+FETEES
Sbjct: 251 GLLAAAAHAAATNSRFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMRFRMLFETEES 310

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFFIC 371
             RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  
Sbjct: 311 SVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSS 370

Query: 372 PPPFFRSKHPRQ-ADDDASDLDNVFKRTMPWIGDDFGVK---DSQSLPGLSLVQWMNMQQ 427
             P  R K P         D +N     M W+  + G +    S +L    ++ WM  + 
Sbjct: 371 LFP-LRLKRPWYPGPSSFQDSNNEVINGMTWLRGEIGEQGGPQSVNLQSFGMLPWMQQRV 429

Query: 428 NPSLANAMQSSYMHSLPGSILQNL 451
           +P++     +    ++  + LQN 
Sbjct: 430 DPAMLRTDYNQQYQAMLAAGLQNF 453


>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 884

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 264/364 (72%), Positives = 306/364 (84%), Gaps = 4/364 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +++ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  +++DG IPNYP+LP +
Sbjct: 15  GEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HADTETDEVYAQMTLQP+ P   +EA L ++L   S +P T +FCK LTA
Sbjct: 75  LICQLHNVTMHADTETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQP-TNYFCKILTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPP QEL+ARDLH N W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+P AKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHP 381
            K P
Sbjct: 373 LKRP 376


>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
 gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
 gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
 gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
          Length = 935

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/445 (62%), Positives = 338/445 (75%), Gaps = 20/445 (4%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D  IPNYP+L  +
Sbjct: 17  GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 76

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ + + ++  L ++L + S +P T +FCKTLTA
Sbjct: 77  LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQP-TNYFCKTLTA 135

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLD+S QPPAQELMARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI ++K QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 255

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFFICP----- 372
           GTITGI DLDP RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  P     
Sbjct: 316 GTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 375

Query: 373 ----PPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQN 428
               PP   S H  + DD    + +     + W   D G++ S +  G+ +  WM  + +
Sbjct: 376 KRPWPPGLPSFHGLKEDDMGMSMSS----PLMW---DRGLQ-SLNFQGMGVNPWMQPRLD 427

Query: 429 PSLANAMQSSYMHSLPGSILQNLNG 453
            S    MQ+    ++  + LQ++ G
Sbjct: 428 TSGLLGMQNDVYQAMAAAALQDMRG 452


>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
          Length = 870

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 266/406 (65%), Positives = 318/406 (78%), Gaps = 15/406 (3%)

Query: 17  GGG-----GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           GGG     GE++T+N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  +++D QIP
Sbjct: 5   GGGAFPSEGERRTLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRELDVQIP 64

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTE 130
           NY +LP +L+C L NVT++AD ETDEVYAQMTLQP+   + +E+    DL   S +P + 
Sbjct: 65  NYTSLPPQLICHLHNVTMNADVETDEVYAQMTLQPLSLQEQKESYFVPDLGSPSKQP-SN 123

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
           +FC TLTASDTSTHGGFS+PRRAAEK+FP LDF+ QPPAQEL ARDLH+  W FRHIYRG
Sbjct: 124 YFCXTLTASDTSTHGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRG 183

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QPKRHLLTTGWS+FVS KRL AGDSVLFIR++  QLLLGIRRAN+ P  + SSVLSSDSM
Sbjct: 184 QPKRHLLTTGWSVFVSAKRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSSVLSSDSM 243

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           HIG+LAAAAHAAA NSPF +FYNPRASPSEFV+P +KY KAV+  Q+S+G+RFRM+FETE
Sbjct: 244 HIGVLAAAAHAAATNSPFNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETE 303

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           ESG RRYMGTITGI D+DPVRW NS+WR+L+VGWDESTAGE+  RVS+WEIEP+T  F +
Sbjct: 304 ESGVRRYMGTITGIGDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEPLTT-FLM 362

Query: 371 CPPPF-FRSKHPRQADDDASDL------DNVFKRTMPWIGDDFGVK 409
            PPP+    K P       S        D   K+   W+G + G +
Sbjct: 363 YPPPYSLNLKRPWTHLQGISSFPGIKEEDVSMKKPFLWMGGENGER 408


>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 899

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 307/544 (56%), Positives = 371/544 (68%), Gaps = 43/544 (7%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  +++D QIPNYP+LP +
Sbjct: 15  GERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L N+T+HAD ETDEVYAQMTLQP+ + + +EA L ++L   S +P T +FCKTLTA
Sbjct: 75  LICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFSMQPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGD+VLFI +EK QLLLGIRRA+R    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA  S FT+F+NPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLDPVRW+NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R
Sbjct: 314 GTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 372

Query: 378 SKHPRQA---DDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPSLA 432
            K P           D D        W+  D   +  Q L   G  +  WM  + +PS+ 
Sbjct: 373 LKRPWPTGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMM 432

Query: 433 NAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLG 492
             MQS     +  + LQ +            + Y+  S P  V Q  Q   LP   + L 
Sbjct: 433 -GMQSDMYQVMATAALQEMRA----------IDYSKIS-PASVLQFQQPQSLPCQSSTL- 479

Query: 493 SNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSIQNPQLPA 552
                 QP           M+ Q   S P QA +   Q   Q S   Q Q   Q+  L  
Sbjct: 480 -----MQP----------QMLHQ---SQPQQAFLQSVQENQQHS---QPQSQTQSHHLQP 518

Query: 553 NLPQ 556
            LPQ
Sbjct: 519 QLPQ 522


>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
 gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
          Length = 914

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/441 (63%), Positives = 333/441 (75%), Gaps = 24/441 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LPA G+ VVYF QGHSEQVAAS  K++D +IPNYP+LP +
Sbjct: 15  GEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQ+TLQP+ P   ++A L +DL   S +P T +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGI+RA R    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIKRATRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEF++PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFIIPLAKYLKAVYYTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLD  RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  F  R
Sbjct: 314 GTITGISDLDVARWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSTFPLR 372

Query: 378 SKHP-----------------RQADDDASDLDNVFKRTMPWI-GD-DFGVKDSQSLPGLS 418
            K P                 R   D   D D     ++ W+ GD D G++ S +L G+ 
Sbjct: 373 LKRPWTPGLHSFHGKLLYTILRALMDGIKDDDLGMNSSLMWLRGDGDRGIQ-SLNLQGMG 431

Query: 419 LVQWMNMQQNPSLANAMQSSY 439
           +  WM  + + S+       Y
Sbjct: 432 VAPWMQPRVDTSMLGLQNDVY 452


>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
 gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
 gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
 gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
          Length = 933

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 276/445 (62%), Positives = 338/445 (75%), Gaps = 20/445 (4%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D  IPNYP+L  +
Sbjct: 15  GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ + + ++  L ++L + S +P T +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLD+S QPPAQELMARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI ++K QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFFICP----- 372
           GTITGI DLDP RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  P     
Sbjct: 314 GTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 373

Query: 373 ----PPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQN 428
               PP   S H  + DD    + +     + W   D G++ S +  G+ +  WM  + +
Sbjct: 374 KRPWPPGLPSFHGLKEDDMGMSMSS----PLMW---DRGLQ-SLNFQGMGVNPWMQPRLD 425

Query: 429 PSLANAMQSSYMHSLPGSILQNLNG 453
            S    MQ+    ++  + LQ++ G
Sbjct: 426 TSGLLGMQNDVYQAMAAAALQDMRG 450


>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 279/446 (62%), Positives = 334/446 (74%), Gaps = 10/446 (2%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           +G  GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K++DG IPNYP+
Sbjct: 12  QGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPS 71

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCK 134
           LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L  +L + S +P T +FCK
Sbjct: 72  LPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQP-TNYFCK 130

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG-QPK 193
           TLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RG QPK
Sbjct: 131 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPK 190

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSVLSSDSMHIG
Sbjct: 191 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIG 250

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LAAAAHAAA NS FT+FYNPRASPSEFV+PL+KY KAV   ++S+GMRFRM+FETEES 
Sbjct: 251 LLAAAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESS 310

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP 373
            RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T   F   P
Sbjct: 311 VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT--FPMYP 368

Query: 374 PFFRSKHPRQADDDASDLDNVFKRT---MPWIGDDFGVKDSQSL--PGLSLVQWMNMQQN 428
             F  +  R     AS L +        + W+  + G +  QSL    + +  W   + +
Sbjct: 369 SLFPLRLKRPWHPGASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQTVGMFPWTQQRLD 428

Query: 429 PSLANAMQSSYMHSLPGSILQNLNGG 454
           P+      +    ++  + LQNL  G
Sbjct: 429 PTFLGNDHNQQYQAMLAAGLQNLGSG 454


>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
          Length = 929

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 268/414 (64%), Positives = 315/414 (76%), Gaps = 2/414 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +KT+N+ELWHACAGPLV+LP  G+ V YFPQGHSEQVAAS ++    QIPNYPNLP +
Sbjct: 36  GVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPYQ 95

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + NVTLHAD ETDE+YAQMTLQP+ S +RE    SD   K +K  +EFFCKTLTAS
Sbjct: 96  LLCQVQNVTLHADKETDEIYAQMTLQPLNS-EREVFPISDFGHKHSKHPSEFFCKTLTAS 154

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLD+++QPP QEL+ RDLHDN WTFRHIYRGQPKRHLLTT
Sbjct: 155 DTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 214

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDE+ QL +G+RR NRQ   L SSVLS+DSMHIG+LAAAA
Sbjct: 215 GWSLFVGSKRLRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAA 274

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAAN SPFT+FYNPRA PSEFV+PLAKY K+V   Q+S+GMRF MMFETEESG RRYMG
Sbjct: 275 HAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMG 334

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI GISD+DP+RW  S+WRN+QV WDE   G+K+NRVS+WEIE      FI P      K
Sbjct: 335 TIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE-TPESLFIFPSLTSGLK 393

Query: 380 HPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLAN 433
            P  +    ++   + +R    + ++  ++ S S+P L     M M   P L N
Sbjct: 394 RPLPSGLLENEWGTLLRRPFIRVPENGTMELSNSIPNLYSEHMMRMLLKPQLIN 447


>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
          Length = 396

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 265/363 (73%), Positives = 307/363 (84%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E+K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+++ QIPNYPNLP +L
Sbjct: 2   EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 61

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   S +P T +FCKTLTAS
Sbjct: 62  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQP-TNYFCKTLTAS 120

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQELMA+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 121 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTT 180

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 181 GWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 240

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 241 HAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 300

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 301 TITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRL 359

Query: 379 KHP 381
           K P
Sbjct: 360 KRP 362


>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
 gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
          Length = 884

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 264/363 (72%), Positives = 305/363 (84%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           EK+ +N+ELWHACAGPLV+LPA G+  VYFPQGHSEQVAAS  K+++ QIP+YP+LP++L
Sbjct: 16  EKRVLNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKEVNAQIPSYPSLPAQL 75

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   + A L +D+   S +P T +FCKTLTAS
Sbjct: 76  ICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKAAYLPADMGTPSKQP-TNYFCKTLTAS 134

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDFS  PPAQEL+ARDLHDN W FRHI+RGQPKRHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 194

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSVLSSDSMH+G+LAAAA
Sbjct: 195 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHLGLLAAAA 254

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRMMFETEES  RRYMG
Sbjct: 255 HAAATNSRFTIFYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRMMFETEESSVRRYMG 314

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLD VRW NSQWR+++VGWDEST GE++ RVS+WEIEP+T  F   P PF  R 
Sbjct: 315 TITGISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPLTT-FPTYPSPFPLRL 373

Query: 379 KHP 381
           K P
Sbjct: 374 KRP 376


>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 916

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/458 (60%), Positives = 345/458 (75%), Gaps = 22/458 (4%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           +TAG +  + EG   E++ +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  ++
Sbjct: 4   STAGFSPQAPEG---ERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNRE 60

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKS 124
           +D  IP+YP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ + + +E  L ++L   S
Sbjct: 61  VDAHIPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPS 120

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P T +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W F
Sbjct: 121 KQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKF 179

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL AGDSV+FI +EK QLLLGIRRANR    + SSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSV 239

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMH+G+LAAAAHAAA NS FT+FYNPRASPSEF++PLAKY KAV+  ++S+GMRFR
Sbjct: 240 LSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFR 299

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITGISDLD  RW NS WR+++VGWDESTAGE++ RVS+WEIEP+
Sbjct: 300 MLFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359

Query: 365 TAPFFICPPPF-----------FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS 413
           T  F + P PF           F S H  + DD   +   ++ R     G D G++   +
Sbjct: 360 TT-FPMYPSPFPLRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRG---DGLDRGIQ-PLN 414

Query: 414 LPGLSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQNL 451
            PG+ +  WM  + + S+   +Q     ++  + LQ +
Sbjct: 415 FPGIGVAPWMQPRLDASMV-GLQPEIYQAMAAAALQEM 451


>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
          Length = 907

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 282/457 (61%), Positives = 340/457 (74%), Gaps = 13/457 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G+KK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D  IPNYP+LP +
Sbjct: 19  GDKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQ 78

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFCKTLT 137
           L+C L NVT+HAD ETDEVYAQMTLQP+   D++   LL ++L   S +P T +FCKTLT
Sbjct: 79  LICQLHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQP-TNYFCKTLT 137

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FP LD+S  PPAQEL+ARDLHDN W FRHI+RGQPKRHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 197

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAA
Sbjct: 198 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAA 257

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHAAA NS FT+FYNPRASPSEFV+PL KY KAV+  ++S+GMRFRM+FETEES  RRY
Sbjct: 258 AAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 317

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-F 376
           MGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  F  
Sbjct: 318 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSAFPM 376

Query: 377 RSKHPRQAD----DDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPS 430
           R K P  +         D D      M W+    G    QSL      +  W+  + + S
Sbjct: 377 RLKRPWPSGLPSFHGLQDGDLNINSPMMWLQGGVGDLGVQSLNFQSFGVAPWIQPRFDTS 436

Query: 431 LANAMQSSYMHSLPGSILQNLNG-GLSQMPQQNNLQY 466
           +  A+Q     ++  + LQ +     S++  Q++LQ+
Sbjct: 437 MP-ALQPEMYQTMAAAALQEMRTVESSKLASQSHLQF 472


>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
          Length = 934

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 270/416 (64%), Positives = 315/416 (75%), Gaps = 4/416 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +KT+N+ELWHACAGPLV+LP  G+ V YFPQGHSEQVAAS ++    QIPNYPNLPS+
Sbjct: 39  GVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPSQ 98

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N TLHAD ETDE+YAQMTLQP+ S +RE    SD  LK +K  +EFFCKTLTAS
Sbjct: 99  LLCQVQNATLHADKETDEIYAQMTLQPLNS-EREVFPISDFGLKHSKHPSEFFCKTLTAS 157

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLD+++QPP QEL+ RDLHDN WTFRHIYRGQPKRHLLTT
Sbjct: 158 DTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 217

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QL +G+RR NRQ   L SSVLS+DSMHIG+LAAAA
Sbjct: 218 GWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLSADSMHIGVLAAAA 277

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAAN SPFT+FYNPRA PSEFV+PLAKY K+V   Q+S+GMRF MMFETEESG RRYMG
Sbjct: 278 HAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGKRRYMG 337

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI GISD+DP+RW  S+WRN+QV WDE   G+K+NRVS+WEIE      FI P      K
Sbjct: 338 TIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE-TPESLFIFPSLTSGLK 396

Query: 380 HPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLAN 433
            P  +      ++   +  R    + ++  ++ S S+P L     M M   P L N
Sbjct: 397 RPLPSGLLGKKNEWGTLLTRPFIRVPENGTMELSNSIPNLYSEHMMKMLFKPQLIN 452


>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
          Length = 902

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 274/444 (61%), Positives = 338/444 (76%), Gaps = 19/444 (4%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  +++D  IP+YP+LP +
Sbjct: 17  GERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQ 76

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ + + +E  L ++L   S +P T +FCKTLTA
Sbjct: 77  LICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPSKQP-TNYFCKTLTA 135

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSV+FI +EK QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 255

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEF++PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF--- 375
           GTITGISDLD  RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF   
Sbjct: 316 GTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLR 374

Query: 376 --------FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQ 427
                   F S H  + DD   +   ++ R     G D G++   + PG+ +  WM  + 
Sbjct: 375 LKRPWPTGFPSFHGLKEDDLGLNSQLMWLRG---DGLDRGIQ-PLNFPGIGVAPWMQPRL 430

Query: 428 NPSLANAMQSSYMHSLPGSILQNL 451
           + S+   +Q     ++  + LQ +
Sbjct: 431 DASMV-GLQPEIYQAMAAAALQEM 453


>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
          Length = 916

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/458 (60%), Positives = 345/458 (75%), Gaps = 22/458 (4%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           +TAG +  + EG   E++ +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  ++
Sbjct: 4   STAGFSPQAPEG---ERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNRE 60

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKS 124
           +D  IP+YP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ + + +E  L ++L   S
Sbjct: 61  VDAHIPSYPSLPPQLICQLHNVTMHADIETDEVYAQMTLQPLTAQEQKEPYLPAELGAPS 120

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P T +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W F
Sbjct: 121 KQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKF 179

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL AGDSV+FI +EK QLLLGIRRANR    + SSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSV 239

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMH+G+LAAAAHAAA NS FT+FYNPRASPSEF++PLAKY KAV+  ++S+GMRFR
Sbjct: 240 LSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFR 299

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITGISDLD  RW NS WR+++VGWDESTAGE++ RVS+WEIEP+
Sbjct: 300 MLFETEESSVRRYMGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359

Query: 365 TAPFFICPPPF-----------FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQS 413
           T  F + P PF           F S H  + DD   +   ++ R     G D G++   +
Sbjct: 360 TT-FPMYPSPFPLRLKRPWPTGFPSFHGLKEDDLGLNSQLMWLRG---DGLDRGIQ-PLN 414

Query: 414 LPGLSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQNL 451
            PG+ +  WM  + + S+   +Q     ++  + LQ +
Sbjct: 415 FPGIGVAPWMQPRLDASMV-GLQPEIYQAMAAAALQEM 451


>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
          Length = 838

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 282/454 (62%), Positives = 337/454 (74%), Gaps = 25/454 (5%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
            G  GEK+ +N+ELWHACAGPLV+LPA G+ VVY PQGHSEQVAAS  K+ID  IPNYP+
Sbjct: 11  RGLEGEKRCLNSELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKEIDAHIPNYPS 70

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCK 134
           LP +L+C L +VT+HAD ETDEVYAQMTLQP+   + ++A + + L   S +P T +FCK
Sbjct: 71  LPPQLICQLHDVTMHADVETDEVYAQMTLQPLTQQEQKDAYVPTVLGFPSKQP-TNYFCK 129

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+ARDLHD  W FRHI+RGQPKR
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKR 189

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL AGDSV+FI ++K QLLLGIRRA R    + SSVLSSDSMHIG+
Sbjct: 190 HLLTTGWSVFVSAKRLVAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGL 249

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAA NS FT+FYNPRASPSEFV+P AK+ KAV+  +IS+GMRFRM+FETEESG 
Sbjct: 250 LAAAAHAAATNSRFTIFYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESGV 309

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTITG  DLDPVRW NS WR+++VGWDESTAGE++ RVS+W+IEP+T  F + P P
Sbjct: 310 RRYMGTITGKCDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPLTT-FPMYPSP 368

Query: 375 F-FRSKHPRQAD-----DDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMN---- 424
           F  R K P Q       DD  D  N     + W+  D G    + +P L      N    
Sbjct: 369 FALRLKRPWQPGLPSLYDDKDDEGN----PVMWLRGDNG----ERIPALQSPSCQNLGIG 420

Query: 425 ---MQQNPSLA-NAMQSSYMHSLPGSILQNLNGG 454
              MQ  P L+   M+S++  +L  S LQ +  G
Sbjct: 421 NPWMQPRPDLSLQGMESNFYQALAASALQEIRSG 454


>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 891

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 276/445 (62%), Positives = 337/445 (75%), Gaps = 20/445 (4%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D  IPNYP+L  +
Sbjct: 17  GEKRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQ 76

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ + + ++  L ++L + S +P T +FCKTLTA
Sbjct: 77  LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQP-TNYFCKTLTA 135

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLD+S QPPAQELMARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI ++K QLLLGIRRANR    + SSVLSSDSMH+G+LAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAA 255

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFFICP----- 372
           GTITGI DLDP RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  P     
Sbjct: 316 GTITGICDLDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRL 375

Query: 373 ----PPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQN 428
               PP   S H  + DD    + +     + W   D G++ S +  G+    WM  + +
Sbjct: 376 KRPWPPGLPSFHGLKEDDMGMSMSS----PLMW---DRGLQ-SLNFQGMGGNPWMQPRLD 427

Query: 429 PSLANAMQSSYMHSLPGSILQNLNG 453
            S    MQ+    ++  + LQ++ G
Sbjct: 428 ASGLLGMQNDVYQAMAAAALQDMRG 452


>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
          Length = 947

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 312/576 (54%), Positives = 381/576 (66%), Gaps = 33/576 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +K IN+ELWHACAGPLV+LP  G+ V YFPQGHSEQVA S K+    QIPNYPNLPS+
Sbjct: 36  GPRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQ 95

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C + NVTLHAD +TDE+YAQM+LQPV S +++     D  LK +K  +EFFCKTLTAS
Sbjct: 96  LMCQVHNVTLHADKDTDEIYAQMSLQPVNS-EKDIFPIPDFGLKPSKHPSEFFCKTLTAS 154

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLD+SMQPP QEL+ RDLHD  +TFRHIYRGQPKRHLLTT
Sbjct: 155 DTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTT 214

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGD+VLFIRDEK QLLLG+RRANRQ  +L SSVLS+DSMHIG+LAAAA
Sbjct: 215 GWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAA 274

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAAN SPFT+FYNPRA PSEFV+PLAKY K+V+  QIS+GMRF MMFETEESG RRYMG
Sbjct: 275 HAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKRRYMG 334

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI GISDLDP+ W  S+WRNLQV WDES  G+K++RVS WEIE      FI P      K
Sbjct: 335 TIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE-TPESLFIFPSLTSSLK 393

Query: 380 HPRQAD--DDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLAN--- 433
            P  A      ++  ++ KR    + ++  GV    ++P +   Q M M   P L N   
Sbjct: 394 RPMHAGFLGGEAEWGSLMKRPFIRVLENGNGVLPYPTIPNICSEQLMKMLLKPQLVNPPG 453

Query: 434 ----AMQSSYMHSLPGSILQNLNGGLSQ----MPQQNNLQYTGQSLPQQVPQIDQLAKLP 485
               A Q S + +      + + G + Q    +P +N L    Q+ PQ  P +DQ    P
Sbjct: 454 TLTPAFQDSGVKAASLQEARIIEGMIKQQPPPIPSENKL-LQNQNHPQ--PCLDQ----P 506

Query: 486 STVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSI 545
              N    + LP QP   + Q    N +    PSG  +   ++P   V T++ L Q  S 
Sbjct: 507 DATN----SDLPSQP-NLVGQVQPLNKLENQTPSGNAEKSNIEP---VHTADQLSQLTST 558

Query: 546 --QNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQT 579
              + +  A  P+N Q    Q  +  QN+    +QT
Sbjct: 559 GQGDEEKLAKSPKNPQNLVNQPSLSNQNKDPLQLQT 594


>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
 gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
          Length = 949

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 282/464 (60%), Positives = 324/464 (69%), Gaps = 22/464 (4%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +K IN+ELWHACAGPLV+LP  G+ V YFPQGHSEQVA S K+    QIPNYPNLPS+
Sbjct: 38  GARKAINSELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQ 97

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C + NVTLHAD ++DE+YAQM+LQPV S +++  L  D  L+ +K   EFFCKTLTAS
Sbjct: 98  LMCQVQNVTLHADKDSDEIYAQMSLQPVNS-EKDVFLVPDFGLRPSKHPNEFFCKTLTAS 156

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLD++MQPP QEL+ RDLHDN WTFRHIYRGQPKRHLLTT
Sbjct: 157 DTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLTT 216

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRANRQ   L SSVLS+DSMHIG+LAAAA
Sbjct: 217 GWSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAA 276

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAAN SPFT+FYNPRA PSEFV+PLAKY K V+  Q+S GMRF MMFETEESG RRYMG
Sbjct: 277 HAAANRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMG 336

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI GISDLDP+RW  S+WRNLQV WDE    +K+NRVS WEIE      FI P      K
Sbjct: 337 TIVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE-TPESLFIFPSLTSGLK 395

Query: 380 HPRQADDDASDLD--NVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAMQS 437
            P      A + D  ++ KR M  + ++    D    P L     M M   P +      
Sbjct: 396 RPLHGGFLAGETDWGSLVKRPMLRVPENIR-GDLSYAPTLCSEPLMKMLLRPQMV----- 449

Query: 438 SYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQL 481
                       NLNG   Q    NNL         Q P++ QL
Sbjct: 450 ------------NLNGTTLQQDSTNNLVKIQDMKDMQNPKMQQL 481


>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
          Length = 934

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 266/414 (64%), Positives = 321/414 (77%), Gaps = 12/414 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP  G+ V+YFPQGHSEQVAAS  K++DGQIPNYPNLP +
Sbjct: 58  GEQRCLNSELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLPPQ 117

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  L  +L   S +P T +FCKTLTA
Sbjct: 118 LICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQP-TNYFCKTLTA 176

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRR+AEK+FPPLDFS+QPP QEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 177 SDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLLT 236

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSV+FI ++  QLLLGIR ANR    + SSVLSSDSMHIG+LAAA
Sbjct: 237 TGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAAA 296

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPR+SPSEFV+PLAKY K+V+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 297 AHAAATNSRFTIFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYM 356

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GT+T ISDLD VRW NS WR+++VGWDESTAGEK+ RVS+WEIEP+T  F + P  F  R
Sbjct: 357 GTVTAISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTT-FPMYPTAFPLR 415

Query: 378 SKHPRQAD--------DDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWM 423
            K P  +         +   + D     ++ W+G+      S +  GL +  W+
Sbjct: 416 LKRPWASGLPSMHGMFNGVKNDDFARYSSLMWLGNGDRGTQSSNFQGLGVSPWL 469


>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
 gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
          Length = 919

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/363 (72%), Positives = 304/363 (83%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+++ QIPNYPNLP +L
Sbjct: 24  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 83

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   +NK  T +FCKTLTAS
Sbjct: 84  ICQLHNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELG-SANKQPTNYFCKTLTAS 142

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPP QELMA+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 143 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTT 202

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 203 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 262

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 263 HAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 322

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 323 TITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRL 381

Query: 379 KHP 381
           K P
Sbjct: 382 KRP 384


>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
 gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
 gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
 gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
          Length = 899

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/364 (72%), Positives = 303/364 (83%), Gaps = 4/364 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP   + VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 20  GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 79

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  L  +L   S +P T +FCKTLTA
Sbjct: 80  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTA 138

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 139 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 198

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSV+FI ++  QLLLGIRRANRQ   + SSVLSSDSMHIG+LAAA
Sbjct: 199 TGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAA 258

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 259 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 318

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTIT ISDLD VRW NS WR+++VGWDEST G+K+ RVS+WEIEP+T  F + P  F  R
Sbjct: 319 GTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTT-FPMYPSAFPLR 377

Query: 378 SKHP 381
            K P
Sbjct: 378 LKRP 381


>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
          Length = 891

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 272/425 (64%), Positives = 326/425 (76%), Gaps = 11/425 (2%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           E   GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D  IPNYP 
Sbjct: 13  EEATGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPG 72

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFC 133
           LP +L+C L N+T+HAD ETDEVYAQMTLQP+   +++   LL ++L + S +P T +FC
Sbjct: 73  LPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGIPSKQP-TNYFC 131

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLTAS TSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+A+DLH N W FRHI+RGQPK
Sbjct: 132 KTLTASGTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPK 191

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS KRL AGD+V+FI +E  QLLLGIRRANR    + SSVLSSDSMHIG
Sbjct: 192 RHLLTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIG 251

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LAAAAHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES 
Sbjct: 252 LLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS 311

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP 373
            RRYMGTITGISDLDPVRW NS WR+++VGWDESTAG+++ RVS+WEIEP+T  F + P 
Sbjct: 312 VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTT-FPMYPS 370

Query: 374 PF-FRSKHPRQAD----DDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQ 426
           PF  R K P  +         + D      + W+  D G +  QSL   G  +  +M  +
Sbjct: 371 PFSLRLKRPWPSGLPSLTGFPNGDMAMNSPLSWLRGDMGDQGMQSLNFQGFGVTPFMQPR 430

Query: 427 QNPSL 431
            + SL
Sbjct: 431 MDASL 435


>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
          Length = 925

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 312/580 (53%), Positives = 382/580 (65%), Gaps = 33/580 (5%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           + GG   + IN+ELWHACAGPLV+LP  G+ V YFPQGHSEQVA S K+    QIPNYPN
Sbjct: 10  KAGGLVSEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPN 69

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKT 135
           LPS+L+C + NVTLHAD +TDE+YAQM+LQPV S +++     D  LK +K  +EFFCKT
Sbjct: 70  LPSQLMCQVHNVTLHADKDTDEIYAQMSLQPVNS-EKDIFPIPDFGLKPSKHPSEFFCKT 128

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LTASDTSTHGGFSVPRRAAEK+FPPLD+SMQPP QEL+ RDLHD  +TFRHIYRGQPKRH
Sbjct: 129 LTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRH 188

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           LLTTGWS+FVS KRL AGD+VLFIRDEK QLLLG+RRANRQ  +L SSVLS+DSMHIG+L
Sbjct: 189 LLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVL 248

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           AAAAHAAAN SPFT+FYNPRA PSEFV+PLAKY K+V+  QIS+GMRF MMFETEESG R
Sbjct: 249 AAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGKR 308

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           RYMGTI GISDLDP+ W  S+WRNLQV WDES  G+K++RVS WEIE      FI P   
Sbjct: 309 RYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE-TPESLFIFPSLT 367

Query: 376 FRSKHPRQAD--DDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLA 432
              K P  A      ++  ++ KR    + ++  GV    ++P +   Q M M   P L 
Sbjct: 368 SSLKRPMHAGFLGGEAEWGSLMKRPFIRVLENGNGVLPYPTIPNICSEQLMKMLLKPQLV 427

Query: 433 N-------AMQSSYMHSLPGSILQNLNGGLSQ----MPQQNNLQYTGQSLPQQVPQIDQL 481
           N       A Q S + +      + + G + Q    +P +N L    Q+ PQ  P +DQ 
Sbjct: 428 NPPGTLTPAFQDSGVKAASLQEARIIEGMIKQQPPPIPSENKL-LQNQNHPQ--PCLDQ- 483

Query: 482 AKLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQ 541
              P   N    + LP QP   + Q    N +    PSG  +   ++P   V T++ L Q
Sbjct: 484 ---PDATN----SDLPSQP-NLVGQVQPLNKLENQTPSGNAEKSNIEP---VHTADQLSQ 532

Query: 542 QPSI--QNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQT 579
             S    + +  A  P+N Q    Q  +  QN+    +QT
Sbjct: 533 LTSTGQGDEEKLAKSPKNPQNLVNQPSLSNQNKDPLQLQT 572


>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
          Length = 880

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/364 (72%), Positives = 303/364 (83%), Gaps = 4/364 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP   + VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 1   GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 60

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  L  +L   S +P T +FCKTLTA
Sbjct: 61  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTA 119

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 120 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 179

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSV+FI ++  QLLLGIRRANRQ   + SSVLSSDSMHIG+LAAA
Sbjct: 180 TGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAA 239

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 240 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 299

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTIT ISDLD VRW NS WR+++VGWDEST G+K+ RVS+WEIEP+T  F + P  F  R
Sbjct: 300 GTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTT-FPMYPSAFPLR 358

Query: 378 SKHP 381
            K P
Sbjct: 359 LKRP 362


>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
          Length = 899

 Score =  538 bits (1386), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 263/364 (72%), Positives = 303/364 (83%), Gaps = 4/364 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP   + VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 20  GEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 79

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  L  +L   S +P T +FCKTLTA
Sbjct: 80  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQP-TNYFCKTLTA 138

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 139 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 198

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSV+FI ++  QLLLGIRRANRQ   + SSVLSSDSMHIG+LAAA
Sbjct: 199 TGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAA 258

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 259 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 318

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTIT ISDLD VRW NS WR+++VGWDEST G+K+ RVS+WEIEP+T  F + P  F  R
Sbjct: 319 GTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTT-FPMYPSAFPLR 377

Query: 378 SKHP 381
            K P
Sbjct: 378 LKRP 381


>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
          Length = 913

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 262/363 (72%), Positives = 302/363 (83%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+I+ QIPNYPNLP +L
Sbjct: 23  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQL 82

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   +NK  T +FCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLNPQELKDPYLPAELG-SANKQPTNYFCKTLTAS 141

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPP QELMA+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PL KY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGI DLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 322 TITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRL 380

Query: 379 KHP 381
           K P
Sbjct: 381 KRP 383


>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
           partial [Cucumis sativus]
          Length = 884

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 305/543 (56%), Positives = 369/543 (67%), Gaps = 43/543 (7%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E++ +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  +++D QIPNYP+LP +L
Sbjct: 1   ERRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQL 60

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L N+T+HAD ETDEVYAQMTLQP+ + + +EA L ++L   S +P T +FCKTLTAS
Sbjct: 61  ICQLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQP-TNYFCKTLTAS 119

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDFSMQPPAQEL+ARDLHDN W FRHI+RGQPKRHLLTT
Sbjct: 120 DTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTT 179

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGD+VLFI +EK QLLLGIRRA+R    + SSVLSSDSMH+G+LAAAA
Sbjct: 180 GWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAA 239

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAA  S FT+F+NPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FET ES  RRYMG
Sbjct: 240 HAAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRYMG 299

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLDPVRW+NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 300 TITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRL 358

Query: 379 KHPRQA---DDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPSLAN 433
           K P           D D        W+  D   +  Q L   G  +  WM  + +PS+  
Sbjct: 359 KRPWPTGLPSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMM- 417

Query: 434 AMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGS 493
            MQS     +  + LQ +            + Y+  S P  V Q  Q   LP   + L  
Sbjct: 418 GMQSDMYQVMATAALQEMRA----------IDYSKIS-PASVLQFQQPQSLPCQSSTL-- 464

Query: 494 NILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSIQNPQLPAN 553
                QP           M+ Q   S P QA +   Q   Q S   Q Q   Q+  L   
Sbjct: 465 ----MQP----------QMLHQ---SQPQQAFLQSVQENQQHS---QPQSQTQSHHLQPQ 504

Query: 554 LPQ 556
           LPQ
Sbjct: 505 LPQ 507


>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
          Length = 914

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/356 (72%), Positives = 302/356 (84%), Gaps = 3/356 (0%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E K +N+ELWHACAGPLV+LP+ G+ VVYFPQGH EQVAAS  K+++ QIPNYP+LP +L
Sbjct: 23  EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 82

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   SN+P T +FCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQP-TNYFCKTLTAS 141

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+A+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTT 201

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASP EFV+P+AKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           TITGISDLDPVRW NS WR+++VGWDESTAGEK+ RVS+WEIEP+T  F + P PF
Sbjct: 322 TITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTT-FPMYPSPF 376


>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
 gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
          Length = 950

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 342/705 (48%), Positives = 419/705 (59%), Gaps = 56/705 (7%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +KTIN+ELW+ACAGPLV+LP  G+ V YFPQGHSEQVA S K+    QIPNYPNL S+
Sbjct: 37  GTRKTINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLASQ 96

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + NVTLHAD +TDE+YAQM+LQPV S +++     D  LK +K  +EFFCKTLTAS
Sbjct: 97  LLCQVHNVTLHADRDTDEIYAQMSLQPVNS-EKDVFPIPDFGLKPSKHPSEFFCKTLTAS 155

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLD++MQPP QEL+ RDLHDN WTFRHIYRGQPKRHLLTT
Sbjct: 156 DTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 215

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRANRQ   L S VLS+DSMHIG+LAAAA
Sbjct: 216 GWSLFVGSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIGVLAAAA 275

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAAN SPFT+FYNPRA PSEFV+PLAKY KAV   Q+S+GMRF MMFETEESG RRYMG
Sbjct: 276 HAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEESGKRRYMG 335

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI GISDLDP+RW  S+WRNLQV WDE    +K+NRVS WEIE      FI P      K
Sbjct: 336 TIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIE-TPENLFIFPSLTSGLK 394

Query: 380 HPRQAD--DDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLAN--- 433
            P  +      ++  N+ KR + W+ +   G     S+P L   +   M   P   N   
Sbjct: 395 RPLHSGYLGGETEWGNLIKRPLIWLPETANGNFAYPSIPNLCSDRLFKMLMKPQGVNYPG 454

Query: 434 AMQSSY--MHSLPGSILQNLN---GGLSQMPQQNNLQYTG---QSLPQQVP-QIDQLAKL 484
             +SS   + +  G+ L ++    G +  MPQ N    T    Q+  Q  P Q D +   
Sbjct: 455 ICESSLQEVSAAKGASLDDIKAMQGTMKHMPQLNQSVVTSVENQNQSQFCPNQSDTVNSP 514

Query: 485 PSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQ---Q 541
            S +N  G NI P     +I  Q     I + L S P     L    L Q ++I++   +
Sbjct: 515 SSKINATG-NIYPP---SNIENQIPAGNIIEKLKSEPE----LSTDQLSQVTSIVECNEE 566

Query: 542 QPS--IQNPQLPANLPQNLQQQQQQQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLH 599
           +PS    NPQ   N  Q   Q Q Q H+  Q     L+Q+ L   I    Q+   Q   +
Sbjct: 567 KPSSSFTNPQNSGN--QLEFQNQNQSHLHAQTNLW-LVQSSLEPSILHPQQIHVPQADAN 623

Query: 600 LLQKLQQQRQSLLSQQSALQQPAQLIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPT 659
                       L     +  P+            L     +  SG P  M    + +  
Sbjct: 624 TFNC----SLPFLDSDEWMSNPS-----------CLSFPGMYGSSG-PVSMFGFQEPSAI 667

Query: 660 SLPQSN-----IMSQQIANSGSLNNVQFSQPPQQPKLEQQQPGIL 699
            LP++      +M+Q + +   LNN++F  P  Q  L QQ P  L
Sbjct: 668 -LPEAGNPSVPLMNQDLWDQ-QLNNLRFLSPASQNPLAQQDPCSL 710


>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
 gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
          Length = 895

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 285/465 (61%), Positives = 337/465 (72%), Gaps = 34/465 (7%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 17  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 76

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ET+EVYAQMTLQP+ P   +E  L  +L   S +P T +FCKTLTA
Sbjct: 77  LICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKEPFLPIELGAGSKQP-TNYFCKTLTA 135

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPP QEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDS++FI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLD  RW NS WR+++VGWDESTAG+K+ RVS+WEIEP+T  F + P  F  R
Sbjct: 316 GTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTT-FPMYPTAFPLR 374

Query: 378 SKHPRQA-----DDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMN------ 424
            K P  +     +   SD    +   M W+ D  G + +QSL   GL    W+       
Sbjct: 375 LKRPWASGLPMFNGGRSDEFARYSSLM-WLRD--GNRGAQSLNFQGLGASPWLQPRIDYP 431

Query: 425 -MQQNPSLANAMQSSYMHS-------------LPGSILQNLNGGL 455
            M   P     M ++ +               LP    QNLNGGL
Sbjct: 432 LMGLKPDTYQQMAAAALEEIRAGDHLKQTSSLLPVQQTQNLNGGL 476


>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
          Length = 904

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 261/363 (71%), Positives = 305/363 (84%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E+K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+++ QIPNYPNLP +L
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   +NK  T +FCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELG-SANKQPTNYFCKTLTAS 141

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+A+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PL+KY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLD  RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 322 TITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRL 380

Query: 379 KHP 381
           K P
Sbjct: 381 KRP 383


>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
 gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
          Length = 911

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/356 (72%), Positives = 300/356 (84%), Gaps = 3/356 (0%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E K +N+ELWHACAGPLV+LPA G+ VVYFPQGH EQVAAS  K+++ QIPNYP+LP +L
Sbjct: 23  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 82

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   S +P T +FCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASKQP-TNYFCKTLTAS 141

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+A DLH N W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASP EFV+P+AKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           TITGISDLDPVRW NS WR+++VGWDESTAGEK+ RVS+WEIEP+T  F + P PF
Sbjct: 322 TITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTT-FPMYPSPF 376


>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
 gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
 gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
          Length = 930

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 261/366 (71%), Positives = 296/366 (80%), Gaps = 2/366 (0%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG +K I++ELWHACAGPLV LP  G+ V YFPQGHSEQVA S  +    QIPNYPNL S
Sbjct: 35  GGGRKLISSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLAS 94

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           +LLC + NVTLHAD ETDE+YAQM+LQPV S +++     D  LK NK  TEFFCKTLTA
Sbjct: 95  QLLCQVHNVTLHADKETDEIYAQMSLQPVNS-EKDVFPIPDFGLKPNKHPTEFFCKTLTA 153

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLD+SMQPP QEL+ RDLHDN WTFRHIYRGQPKRHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 213

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FV  KRL AGDSVLFIRDEK QLLLG+RRANRQ  +L SSVLS+DSMHIG+LAAA
Sbjct: 214 TGWSMFVGAKRLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAA 273

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAAN S FT+FYNPRA PSEFV+PLAK+ K+V++ Q+S+GMRF MMFETEESG RRYM
Sbjct: 274 AHAAANRSTFTIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRRYM 333

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTI+GISDLDP+RW  S+WR LQV WDE   G+K+NRVS WE+E      FI P      
Sbjct: 334 GTISGISDLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVE-TPESLFIFPSLTAGL 392

Query: 379 KHPRQA 384
           K P Q+
Sbjct: 393 KRPYQS 398


>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
 gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
          Length = 917

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 261/363 (71%), Positives = 305/363 (84%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E+K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+++ QIPNYPNLP +L
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   +NK  T +FCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELG-SANKQPTNYFCKTLTAS 141

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+A+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PL+KY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLD  RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 322 TITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRL 380

Query: 379 KHP 381
           K P
Sbjct: 381 KRP 383


>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
          Length = 954

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 272/419 (64%), Positives = 312/419 (74%), Gaps = 9/419 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +K IN+ELWHACAGPLV LP  G+   YFPQGHSEQVA S K+    QIPNYPNLPS+
Sbjct: 38  GSRKAINSELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQ 97

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + NVTLHAD ETDE+YAQM+L+PV S +++     D  LK +K  +EFFCKTLTAS
Sbjct: 98  LLCQVQNVTLHADKETDEIYAQMSLKPVNS-EKDVFPVPDFGLKPSKHPSEFFCKTLTAS 156

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+MQPP+QEL+ RDLHDN WTFRHIYRGQPKRHLLTT
Sbjct: 157 DTSTHGGFSVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKRHLLTT 216

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAAAA
Sbjct: 217 GWSLFVGAKRLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIGVLAAAA 276

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAAN SPFT+FYNPRA PSEFV+PLA Y KA++  Q+S+GMRF MMFETEESG RRYMG
Sbjct: 277 HAAANRSPFTIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGKRRYMG 336

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI   SDLDP+RW  S+WRNLQV WDE    +K+NRVS WEIE      FI P      K
Sbjct: 337 TIVSTSDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE-TPENIFIFPSLTSSLK 395

Query: 380 HPRQAD--DDASDLDNVFKR---TMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLAN 433
            P         ++  N+ KR    +P IG+  G     S+  L   Q +NM   P L N
Sbjct: 396 RPSHTGFLGAETEWGNLIKRPFIRVPEIGN--GNSFPYSISNLCSEQLVNMLLKPQLVN 452


>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
          Length = 820

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 304/574 (52%), Positives = 377/574 (65%), Gaps = 66/574 (11%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           +T+G +  + EG   E K +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAA+  K+
Sbjct: 4   STSGLSQQAHEG---ENKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKE 60

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKS 124
           +D  IPNYP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   ++  +  +L + S
Sbjct: 61  VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTYIPVELGIPS 120

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P T +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPP QEL+ARDLHD  W F
Sbjct: 121 KQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKF 179

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA R    + SSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSV 239

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMHIG+LAAAAHAA+ NS FT+FYNPRASPSEFV+PL+KY KAV+  ++S+GMRFR
Sbjct: 240 LSSDSMHIGLLAAAAHAASTNSCFTIFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFR 299

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITGI DLDP+RW NS WR+++VGWDESTAGE++ RVS+WEIEP+
Sbjct: 300 MLFETEESSVRRYMGTITGIGDLDPIRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359

Query: 365 TAPFFICPPPFFRSKHPRQADDDASDLDNVFKRT---MPWIGDDFGVKDSQSL--PGLSL 419
           T   F   P  F  +  R     AS   +  +     M W+  + G +   SL    + +
Sbjct: 360 TT--FPMYPSLFPLRLKRPWYPGASSFQDGREGAVNGMTWLRGETGEQGLHSLNFQNVGM 417

Query: 420 VQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQID 479
             W   + + + A    +    ++  + LQN+ G              G SL QQ  Q+ 
Sbjct: 418 FPWTQQRVDTTFARNDLNQQYQAMLAAGLQNIGG--------------GDSLKQQFLQLQ 463

Query: 480 QLAKLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNIL 539
           Q  +                          QN + Q       Q QV+QP     +S+IL
Sbjct: 464 QPFQY-------------------FQHSGSQNPLLQ-------QHQVIQPS---ISSHIL 494

Query: 540 QQQPSIQNPQLPANLPQNLQQQ-------QQQQH 566
           Q Q  +    LP NLP+++QQQ       Q QQH
Sbjct: 495 QAQTQM----LPENLPRHMQQQVNNQSEEQPQQH 524


>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
          Length = 905

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/356 (72%), Positives = 302/356 (84%), Gaps = 3/356 (0%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E K +N+ELWHACAGPLV+LP+ G+ VVYFPQGH EQVAAS  K+++ QIPNYP+LP +L
Sbjct: 14  EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQL 73

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   SN+P T +FCKTLTAS
Sbjct: 74  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTASNQP-TNYFCKTLTAS 132

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+A+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 133 DTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRHLLTT 192

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 193 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 252

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASP EFV+P+AKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 253 HAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 312

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           TITGISDLDPVRW NS WR+++VGWDESTAGEK+ RVS+WEIEP+T  F + P PF
Sbjct: 313 TITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTT-FPMYPSPF 367


>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
 gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
 gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
          Length = 917

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 261/363 (71%), Positives = 305/363 (84%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E+K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+++ QIPNYPNLP +L
Sbjct: 23  EQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQL 82

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ P   ++  L ++L   +NK  T +FCKTLTAS
Sbjct: 83  ICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPYLPAELG-SANKQPTNYFCKTLTAS 141

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+A+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PL+KY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLD  RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 322 TITGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRL 380

Query: 379 KHP 381
           K P
Sbjct: 381 KRP 383


>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 891

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/405 (65%), Positives = 319/405 (78%), Gaps = 14/405 (3%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LPA G+ V+YFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 19  GEQRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 78

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  L  +L   S +P T +FCKTLTA
Sbjct: 79  LICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPIELGAASKQP-TNYFCKTLTA 137

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRR+AEK+FPPLDFS+QPP QEL+A+DLHDN W FRHI+RGQPKRHLLT
Sbjct: 138 SDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHLLT 197

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSV+FI ++  QLLLGIR ANR    + SSVLSSDSMHIG+LAAA
Sbjct: 198 TGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSVLSSDSMHIGLLAAA 257

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEF++PLAKY K+V+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 258 AHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRYM 317

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTIT ISDLD  RW NS WR+++VGWDESTAGEK+ RVS+WEIEP+T  F + P  F  R
Sbjct: 318 GTITTISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTT-FPMYPTAFPLR 376

Query: 378 SKHPRQAD--------DDASDLDNVFKRTMPWIGDDFGVKDSQSL 414
            K P  +         +   + D     ++ W+GD  G + +QSL
Sbjct: 377 LKRPWASGMPSMHGMFNGVKNDDFARYSSLMWLGD--GDRGAQSL 419


>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
 gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
          Length = 844

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/423 (63%), Positives = 320/423 (75%), Gaps = 10/423 (2%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           +T+G    + EG   E K +N+ELWHACAGPLV LP  G+ VVYFPQGHSEQVAA+  K+
Sbjct: 4   STSGMGQQAHEG---ENKCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKE 60

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKS 124
           +D  IPNYPNLP +L+C L NVT+HAD ETDEVYAQMTLQP+   + ++  L  +L + S
Sbjct: 61  LDIHIPNYPNLPPQLICPLHNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPS 120

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P T +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS  PP QEL+ARDLHD  W F
Sbjct: 121 RQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKF 179

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QL LGIRRA R    + SSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSV 239

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMHIG+LAAAAHAA+ NS F VF+NPRASPSEFV+PL+KY KAV+  ++S+GMRFR
Sbjct: 240 LSSDSMHIGLLAAAAHAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFR 299

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITGI DLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+
Sbjct: 300 MLFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359

Query: 365 TAPFFICPPPF-FRSKHP-RQADDDASDLDNVFKRTMPWIGDDFGV--KDSQSLPGLSLV 420
           T  F + P  F  R K P  Q      D +N     M W+  + G     S +L    ++
Sbjct: 360 TT-FPMYPSLFPLRLKRPFYQGTSSYQDSNNEAINRMSWLRGNAGELGHHSMNLQSFGML 418

Query: 421 QWM 423
            WM
Sbjct: 419 PWM 421


>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 758

 Score =  534 bits (1375), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/409 (65%), Positives = 324/409 (79%), Gaps = 11/409 (2%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           ++++N+ELWHACAG LV+LP  G+ VVYFPQGH EQVAAS +K+ D  IPNYP+LPS+L 
Sbjct: 1   RRSLNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLF 60

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C+L NV+LHAD ETDEVYAQMTL P+ + ++EALL  D  + + +P +E+FCKTLTASDT
Sbjct: 61  CLLDNVSLHADHETDEVYAQMTLLPIQNSEKEALLAPDSVIPNKQP-SEYFCKTLTASDT 119

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFS+PRRAAEK+FPPLDF+  PPAQEL+ARDLHD  W FRHIYRGQP+RHLLTTGW
Sbjct: 120 STHGGFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLTTGW 179

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           S+FVS KRL AGDSVLFIRD+K  LLLGIRRANRQ + + SSVLSSDSMH G+LAAA+HA
Sbjct: 180 SVFVSIKRLQAGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFGVLAAASHA 239

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
           AA +S F +FYNPR SPSEFV+PLAKY KA+++ Q++LGMRFRM FETEES  R+YMGTI
Sbjct: 240 AATSSRFKIFYNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESNVRKYMGTI 299

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSKH 380
           T I DLDP RW  S WR+L+VGWDES AG+++ RVS+WEIEP   PF +CPPP   RSK 
Sbjct: 300 TCIGDLDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIEPTPTPFLLCPPPVALRSKR 359

Query: 381 PRQADDDASDLDNVFKRTMPW-IGDDFGVKDSQSLPGLSLV-QWMNMQQ 427
           P++   DA  L+ + K++  W  G D  V  S  + GL L   WM + Q
Sbjct: 360 PQE---DA--LEMLMKKSHMWPHGSDPSV--SLKVGGLRLDPLWMRLPQ 401


>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 310/581 (53%), Positives = 378/581 (65%), Gaps = 45/581 (7%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +K IN+ELWHACAGPLV+LP  G+ V YFPQGHSEQVA S K+    QIPNYPNLPS+
Sbjct: 37  GPRKAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQ 96

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L+C + NVTLHAD +TDE+YAQM+LQPV S +++     D  LK +K  +EFFCKTLTAS
Sbjct: 97  LMCQVHNVTLHADKDTDEIYAQMSLQPVNS-EKDIFPIPDFGLKPSKHPSEFFCKTLTAS 155

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLD+SMQPP QEL+ RDLHD  +TFRHIYRGQPKRHLLTT
Sbjct: 156 DTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLTT 215

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGD+VLFIRDEK QLLLG+RRANRQ  +L SSVLS+DSMHIG+LAAAA
Sbjct: 216 GWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIGVLAAAA 275

Query: 260 HAAANNSPFTVFYNPR-----ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           HAAAN SPFT+FYNPR     A PSEFV+PLAKY K+V+  QIS+GMRF MMFETEESG 
Sbjct: 276 HAAANRSPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGK 335

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTI GISDLDP+ W  S+WRNLQV WDES  G+K++RVS WEIE      FI P  
Sbjct: 336 RRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE-TPESLFIFPSL 394

Query: 375 FFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSL 431
               K P  A      ++  ++ KR    + ++  GV    ++P +   Q M M   P L
Sbjct: 395 TSSLKRPMHAGFLGGEAEWGSLMKRPFIRVLENGNGVLPYPTIPNICSEQLMKMLLKPQL 454

Query: 432 AN-------AMQSSYMHSLPGSILQNLNGGLSQ----MPQQNNLQYTGQSLPQQVPQIDQ 480
            N       A Q S + +      + + G + Q    +P +N L    Q+ PQ  P +DQ
Sbjct: 455 VNPPGTLTPAFQDSGVKAASLQEARIIEGMIKQQPPPIPSENKL-LQNQNHPQ--PCLDQ 511

Query: 481 LAKLPSTVNPLGSNILPQQPLGDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQ 540
               P   N    + LP QP   + Q    N +    PSG  +   ++P   V T++ L 
Sbjct: 512 ----PDATN----SDLPSQP-NLVGQVQPLNKLENQTPSGNAEKSNIEP---VHTADQLS 559

Query: 541 QQPSI---------QNPQLPANLPQNLQQQQQQQHIMGQNQ 572
           Q  S          ++P+ P NL  +  Q   +  I    Q
Sbjct: 560 QLTSTGQGDEEKLAKSPKNPQNLTNSFMQPHLESSIFHAQQ 600


>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
          Length = 907

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 261/363 (71%), Positives = 303/363 (83%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+I+ QIPNYPNLP +L
Sbjct: 24  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQL 83

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT++AD ETDEVYAQMTLQP+ P   ++  L ++L   +NK  T +FCKTLTAS
Sbjct: 84  ICQLHNVTMNADPETDEVYAQMTLQPLNPQELKDPYLPAELG-TANKQPTNYFCKTLTAS 142

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF++QPPAQEL A+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 143 DTSTHGGFSVPRRAAEKVFPPLDFTLQPPAQELFAKDLHGNEWKFRHIFRGQPKRHLLTT 202

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRA R    + SSVLSSDSMHIG+LAAAA
Sbjct: 203 GWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAAA 262

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASP EFV+PLAKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 263 HAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 322

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R 
Sbjct: 323 TITGISDLDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPTPFPLRL 381

Query: 379 KHP 381
           K P
Sbjct: 382 KRP 384


>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
          Length = 795

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 273/425 (64%), Positives = 327/425 (76%), Gaps = 13/425 (3%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           EKK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L
Sbjct: 1   EKKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQL 60

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTAS
Sbjct: 61  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTAS 119

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTT
Sbjct: 120 DTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTT 179

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+LAAAA
Sbjct: 180 GWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAA 239

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMG
Sbjct: 240 HAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMG 299

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TIT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R 
Sbjct: 300 TITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRV 358

Query: 379 KHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLSLVQWMNMQQNPSLANA 434
           KHP  +   +   D+     + W+    G    QSL    PG+    W   + +PSL ++
Sbjct: 359 KHPWYSGVASLHDDS---NALMWLRGVAGEGGFQSLNFQSPGIG--SWGQQRLHPSLLSS 413

Query: 435 MQSSY 439
               Y
Sbjct: 414 DHDQY 418


>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
          Length = 897

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/364 (71%), Positives = 303/364 (83%), Gaps = 4/364 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 17  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 76

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ET+EVYAQMTLQP+ P   ++  L  +L   S +P T +FCKTLTA
Sbjct: 77  LICQLHNVTMHADAETEEVYAQMTLQPLSPEEQKDPFLPIELGAGSKQP-TNYFCKTLTA 135

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPP QEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDS++FI ++  QLLLGIRRA+R    + SSVLSSDSMHIG+LAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLD  RW NS WR+++VGWDESTAG+K+ RVS+WEIEP+T  F + P  F  R
Sbjct: 316 GTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTT-FPMYPTAFPLR 374

Query: 378 SKHP 381
            K P
Sbjct: 375 LKRP 378


>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
 gi|219886495|gb|ACL53622.1| unknown [Zea mays]
 gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 888

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 286/484 (59%), Positives = 346/484 (71%), Gaps = 27/484 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 17  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 76

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ET EVYAQMTLQP+ P   +E  L  +L   SN+P T +FCKTLTA
Sbjct: 77  LICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQP-TNYFCKTLTA 135

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS  PP QEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDS++FI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTIT ISDLD  RW NS WR+++VGWDESTAG+K+ RVS+WEIEP+ A F + P  F  R
Sbjct: 316 GTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA-FPMYPTAFPLR 374

Query: 378 SKHPRQA-----DDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPS 430
            K P  +     +   SD    +   M W+ D  G + +QSL   GL    W+  + +  
Sbjct: 375 LKRPWASGLPMFNGGRSDEFARYSSLM-WLRD--GNRGAQSLNFQGLGASPWLQPRIDYP 431

Query: 431 LANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNP 490
           L      +Y   +  + L+ +  G       ++L+     LP Q PQ      L   ++P
Sbjct: 432 LLGLKLDTYQQ-MAAAALEEIRAG-------DHLKQISSLLPVQQPQ-----NLSGGLDP 478

Query: 491 LGSN 494
           L  N
Sbjct: 479 LYGN 482


>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
 gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
          Length = 372

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 263/364 (72%), Positives = 304/364 (83%), Gaps = 5/364 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           +KK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D  IPNYP+LP +L
Sbjct: 1   DKKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQL 60

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFCKTLTA 138
           +C L NVT+HAD ETDEVYAQMTLQP+   D++   LL ++L   S +P T +FCKTLTA
Sbjct: 61  ICQLHNVTMHADVETDEVYAQMTLQPLSQDDQKDAYLLPAELGTASKQP-TNYFCKTLTA 119

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FP LD+S  PPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 120 SDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 179

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 180 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAAA 239

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PL KY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 240 AHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 299

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  F  R
Sbjct: 300 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSAFPMR 358

Query: 378 SKHP 381
            K P
Sbjct: 359 LKRP 362


>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
          Length = 881

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 286/484 (59%), Positives = 346/484 (71%), Gaps = 27/484 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 10  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 69

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ET EVYAQMTLQP+ P   +E  L  +L   SN+P T +FCKTLTA
Sbjct: 70  LICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQP-TNYFCKTLTA 128

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS  PP QEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 129 SDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 188

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDS++FI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 189 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 248

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 249 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 308

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTIT ISDLD  RW NS WR+++VGWDESTAG+K+ RVS+WEIEP+ A F + P  F  R
Sbjct: 309 GTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA-FPMYPTAFPLR 367

Query: 378 SKHPRQA-----DDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPS 430
            K P  +     +   SD    +   M W+ D  G + +QSL   GL    W+  + +  
Sbjct: 368 LKRPWASGLPMFNGGRSDEFARYSSLM-WLRD--GNRGAQSLNFQGLGASPWLQPRIDYP 424

Query: 431 LANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNP 490
           L      +Y   +  + L+ +  G       ++L+     LP Q PQ      L   ++P
Sbjct: 425 LLGLKLDTYQQ-MAAAALEEIRAG-------DHLKQISSLLPVQQPQ-----NLSGGLDP 471

Query: 491 LGSN 494
           L  N
Sbjct: 472 LYGN 475


>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
          Length = 868

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/404 (65%), Positives = 316/404 (78%), Gaps = 9/404 (2%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
             GEKK++N+ELWHACAGPLV+LP  GT VVYFPQGHSEQVAAS  K+I+G IP+YP LP
Sbjct: 2   AAGEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLP 61

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFCKT 135
            +L+C L NVT+ AD ETDEVYAQMTLQP+   +++   LL ++L   S +P + +FCKT
Sbjct: 62  PQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTLSKQP-SNYFCKT 120

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LTASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ +DLH N W FRHI+RGQPKRH
Sbjct: 121 LTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRH 180

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           LLTTGWS+FVS KRL AGDSV+FI +E  QLLLGIRRANR    L SSVLSSDSMHIG+L
Sbjct: 181 LLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIGLL 240

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           AAAAHAAA NS FT+F+NPRA PSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  R
Sbjct: 241 AAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSIR 300

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           RYMGTITGI DLDPVRW NS W++++VGWDESTAGE++ RVS+WEIEP+T  F + P PF
Sbjct: 301 RYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPF 359

Query: 376 -FRSKHPR----QADDDASDLDNVFKRTMPWIGDDFGVKDSQSL 414
             R K P      +    S+ D      +PW+    G +  QSL
Sbjct: 360 SLRLKRPWPPGLPSFPGLSNGDMTMNSQLPWLHGGMGDQGIQSL 403


>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
          Length = 818

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/362 (71%), Positives = 303/362 (83%), Gaps = 4/362 (1%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L+
Sbjct: 24  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 83

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 84  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 142

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 202

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 203 WSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 263 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 323 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 381

Query: 380 HP 381
           HP
Sbjct: 382 HP 383


>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
          Length = 915

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/363 (71%), Positives = 302/363 (83%), Gaps = 4/363 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E K +N+ELWHACAGPLV+LPA G+ V+YFPQGHSEQV+AS  K+I+ QIPNYPNLP +L
Sbjct: 23  EHKCLNSELWHACAGPLVSLPAVGSRVLYFPQGHSEQVSASTNKEIESQIPNYPNLPPQL 82

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NV +HAD ETDEV AQMTLQP+ P   ++  L ++L   +NK  T +FCKTLTAS
Sbjct: 83  ICQLHNVIMHADAETDEVCAQMTLQPLSPQELKDPFLPAELG-TANKQPTNYFCKTLTAS 141

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQELMA+DLH N W FRHI+RGQPKRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLLTT 201

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+F+S KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 202 GWSVFISAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 261

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 262 HAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 321

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFFICPPPFFRS 378
           TITGISDLDP RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  P +  P P  R 
Sbjct: 322 TITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTIPMYSSPFP-MRL 380

Query: 379 KHP 381
           K P
Sbjct: 381 KRP 383


>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
          Length = 925

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 274/423 (64%), Positives = 325/423 (76%), Gaps = 21/423 (4%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E K +N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVAAS  K+++ QIP+YPNLP +L
Sbjct: 37  EHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPSYPNLPPQL 96

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+ AD ET+EVYAQMTLQP+ P   ++  L ++L L S +P T +FCKTLTAS
Sbjct: 97  ICQLHNVTMQADAETEEVYAQMTLQPLNPQELKDPYLPAELGLVSKQP-TNYFCKTLTAS 155

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDF+ QPP QELMA DLH N W FRHI+RGQPKRHLLTT
Sbjct: 156 DTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKRHLLTT 215

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 216 GWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 275

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA+ NS FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES  RRYMG
Sbjct: 276 HAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMG 335

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFFICPPPFFRS 378
           TITGISDLD VRW NS WR+++VGWDESTAG+++ RVS+WEIEP+T  P +  P P  R 
Sbjct: 336 TITGISDLDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTSPFP-LRL 394

Query: 379 KHP--------RQADDDASDLDNVFKRTMPWIGDDF--GVKDSQSLPGLSLVQWMNMQQN 428
           K P            DD  DL N    ++ W+ D    G + S +  GL +  WM  + +
Sbjct: 395 KRPWPTGLPSLHGGKDD--DLAN----SLMWLRDTTNPGFQ-SLNFGGLGMNSWMQPRLD 447

Query: 429 PSL 431
            SL
Sbjct: 448 TSL 450


>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
 gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
          Length = 881

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/406 (65%), Positives = 317/406 (78%), Gaps = 9/406 (2%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           E   GEKK++N+ELWHACAGPLV+LP  GT VVYFPQGHSEQVAAS  K+I+G IP+YP 
Sbjct: 13  EMAAGEKKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPG 72

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFC 133
           LP +L+C L NVT+ AD ETDEVYAQMTLQP+   +++   LL ++L   S +P + +FC
Sbjct: 73  LPPQLICQLHNVTMDADVETDEVYAQMTLQPLTPQEQKDVCLLPAELGTLSKQP-SNYFC 131

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLTASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ +DLH N W FRHI+RGQPK
Sbjct: 132 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPK 191

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS KRL AGDSV+FI +E  QLLLGIRRANR    L SSVLSSDSMHIG
Sbjct: 192 RHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIG 251

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LAAAAHAAA NS FT+F+NPRA PSEFV+PLAKY KAV+  ++S+GMRF+M+FETEES 
Sbjct: 252 LLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFQMLFETEESS 311

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP 373
            RRYMGTITGI DLDPVRW NS W++++VGWDESTAGE++ RVS+WEIEP+T  F + P 
Sbjct: 312 IRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPS 370

Query: 374 PF-FRSKHPR----QADDDASDLDNVFKRTMPWIGDDFGVKDSQSL 414
           PF  R K P      +    S+ D      +PW+    G +  QSL
Sbjct: 371 PFSLRLKRPWPPGLPSFPGLSNGDMTMNSQLPWLHGGMGDQGIQSL 416


>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
          Length = 819

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/424 (64%), Positives = 325/424 (76%), Gaps = 13/424 (3%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L+
Sbjct: 24  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 83

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 84  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 142

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 202

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 263 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 323 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 381

Query: 380 HPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLSLVQWMNMQQNPSLANAM 435
           HP  +   +   D+     + W+    G    QSL    PG+    W   + +PSL +  
Sbjct: 382 HPWYSGVASLHDDS---NALMWLRGVAGEGGFQSLNFQSPGIG--SWGQQRLHPSLLSTD 436

Query: 436 QSSY 439
              Y
Sbjct: 437 HDQY 440


>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
          Length = 821

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/424 (64%), Positives = 325/424 (76%), Gaps = 13/424 (3%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L+
Sbjct: 24  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 83

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 84  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 142

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 202

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 263 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 323 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 381

Query: 380 HPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLSLVQWMNMQQNPSLANAM 435
           HP  +   +   D+     + W+    G    QSL    PG+    W   + +PSL +  
Sbjct: 382 HPWYSGVASLHDDS---NALMWLRGVAGEGGFQSLNFQSPGIG--SWGQQRLHPSLLSTD 436

Query: 436 QSSY 439
              Y
Sbjct: 437 HDQY 440


>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
 gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
          Length = 816

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/424 (64%), Positives = 326/424 (76%), Gaps = 13/424 (3%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L+
Sbjct: 25  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 85  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 143

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 144 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 203

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 204 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 263

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 264 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 323

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 324 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 382

Query: 380 HPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLSLVQWMNMQQNPSLANAM 435
           HP  +   +   D+     + W+    G    QSL    PG+    W   + +PSL ++ 
Sbjct: 383 HPWYSGVASLHDDS---NALMWLRGVAGEGGFQSLNFQSPGIG--SWGQQRLHPSLLSSD 437

Query: 436 QSSY 439
              Y
Sbjct: 438 HDQY 441


>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
 gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
 gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
 gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
          Length = 818

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/424 (64%), Positives = 326/424 (76%), Gaps = 13/424 (3%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L+
Sbjct: 25  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 85  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 143

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 144 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 203

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 204 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 263

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 264 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 323

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 324 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 382

Query: 380 HPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLSLVQWMNMQQNPSLANAM 435
           HP  +   +   D+     + W+    G    QSL    PG+    W   + +PSL ++ 
Sbjct: 383 HPWYSGVASLHDDS---NALMWLRGVAGEGGFQSLNFQSPGIG--SWGQQRLHPSLLSSD 437

Query: 436 QSSY 439
              Y
Sbjct: 438 HDQY 441


>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
          Length = 818

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 259/362 (71%), Positives = 303/362 (83%), Gaps = 4/362 (1%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L+
Sbjct: 24  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 83

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 84  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 142

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLLTTG 202

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 203 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAH 262

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 263 AAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 322

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 323 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 381

Query: 380 HP 381
           HP
Sbjct: 382 HP 383


>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 781

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 286/484 (59%), Positives = 346/484 (71%), Gaps = 27/484 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 17  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 76

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ET EVYAQMTLQP+ P   +E  L  +L   SN+P T +FCKTLTA
Sbjct: 77  LICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQP-TNYFCKTLTA 135

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS  PP QEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDS++FI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 256 AHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 315

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTIT ISDLD  RW NS WR+++VGWDESTAG+K+ RVS+WEIEP+ A F + P  F  R
Sbjct: 316 GTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA-FPMYPTAFPLR 374

Query: 378 SKHPRQA-----DDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPS 430
            K P  +     +   SD    +   M W+ D  G + +QSL   GL    W+  + +  
Sbjct: 375 LKRPWASGLPMFNGGRSDEFARYSSLM-WLRD--GNRGAQSLNFQGLGASPWLQPRIDYP 431

Query: 431 LANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNP 490
           L      +Y   +  + L+ +  G       ++L+     LP Q PQ      L   ++P
Sbjct: 432 LLGLKLDTYQQ-MAAAALEEIRAG-------DHLKQISSLLPVQQPQ-----NLSGGLDP 478

Query: 491 LGSN 494
           L  N
Sbjct: 479 LYGN 482


>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
          Length = 843

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 277/453 (61%), Positives = 336/453 (74%), Gaps = 11/453 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK +N+EL HACAGPLV LP  G+ VVYFPQGHSEQVAA+  K++D  IPNYPNLP +
Sbjct: 15  GEKKCLNSELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+   + ++  L  +L + S +P T +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQMTLQPLTRQEQKDTYLPVELGIPSRQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS  PP QEL+ARDLHD  W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI ++K QLLLGIRRA R    + SSVLSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FTVF+NPRASPSEFV+PL+KY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGI DLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  F  R
Sbjct: 314 GTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSLFPLR 372

Query: 378 SKHPRQADDDASDLDNVFK-RTMPWIGDDFGVKDSQ--SLPGLSLVQWMNMQQNPS-LAN 433
            K P      +   +N      M W+  + G +     +L    ++ WM  + +P+ L N
Sbjct: 373 LKRPWYPGTSSFQENNSETINGMAWLRGEGGDQGPHLMNLQSFGMLPWMQQRVDPTILRN 432

Query: 434 AMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQY 466
            +   Y  ++  + LQN   G   M +Q  +Q+
Sbjct: 433 DLNQQY-QAMLATGLQNFGSG--DMLKQQLMQF 462


>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
 gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
          Length = 844

 Score =  531 bits (1367), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 288/495 (58%), Positives = 347/495 (70%), Gaps = 28/495 (5%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           +T+G    + EG   E K +N+ELWHACAGPLV LP  G+ VVYFPQGHSEQVAA+  K+
Sbjct: 4   STSGMGQQAHEG---ENKCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKE 60

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKS 124
           +D  IPNYPNLP +L+C L NVT+HAD ETDEVYAQMTLQP+   + ++  L  +L + S
Sbjct: 61  VDIHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTLQEQKDTYLPVELGIPS 120

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P T +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLDFS  PP QEL+ARDLHD  W F
Sbjct: 121 RQP-TNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKF 179

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QL LGIRRA R    + SSV
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSV 239

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMHIG+LAAAAHAA+ NS F VF+NPRASPSEFV+PL+KY KAV+  ++S+GMRFR
Sbjct: 240 LSSDSMHIGLLAAAAHAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFR 299

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITGI DLDPVRW NS WR+++VGWDESTAGE++ RVS+WEIEP+
Sbjct: 300 MLFETEESSVRRYMGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPL 359

Query: 365 TAPFFICPPPF-FRSKHPRQADDDASDLDNVFK-RTMPWIGDDFG-----VKDSQSLPGL 417
           T  F + P  F  R K P      +   +N      M W+  +       + + QS  G 
Sbjct: 360 TT-FPMYPSLFPLRLKRPWYPGTSSFQENNSEAINGMTWLRGESSEQGPHLLNLQSFGG- 417

Query: 418 SLVQWMNMQQNPS-LANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVP 476
            +  WM  + +P+ L N +   Y  ++  S LQN   G   M QQ            Q P
Sbjct: 418 -MFPWMQQRVDPTMLRNDLNQQY-QAMLASGLQNFGSG-DLMKQQ----------LMQFP 464

Query: 477 QIDQLAKLPSTVNPL 491
           Q  Q  +   +VNPL
Sbjct: 465 QPVQYVQHAGSVNPL 479


>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
 gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
          Length = 372

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 260/364 (71%), Positives = 302/364 (82%), Gaps = 5/364 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           + K +N+ELWHACAGPLV+LP  G+  VYFPQGHSEQVAAS  K++D  IPNYP+LP++L
Sbjct: 1   DNKCLNSELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQL 60

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFCKTLTA 138
           +C L NVT+HAD ETDEVYAQMTLQP+   D++   LL ++L   S +P + +FCKTLTA
Sbjct: 61  ICQLHNVTMHADVETDEVYAQMTLQPLSPEDKKDAYLLPAELGTASKQP-SNYFCKTLTA 119

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS  PPAQEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 120 SDTSTHGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 179

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI +EK QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 180 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 239

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPR SPSEFV+PL KY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 240 AHAAATNSRFTIFYNPRTSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRYM 299

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGISDLDP RW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P  F  R
Sbjct: 300 GTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSAFPMR 358

Query: 378 SKHP 381
            K P
Sbjct: 359 LKRP 362


>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
          Length = 844

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/381 (68%), Positives = 311/381 (81%), Gaps = 8/381 (2%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           +T+G    S EG    +K +N+ELWHACAGPLV+LP++G+ VVYFPQGHSEQVAA+  K+
Sbjct: 4   STSGLVQQSHEG----EKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 59

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKS 124
           +DG IPNYP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  +  +L + S
Sbjct: 60  VDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPS 119

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P + +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD+S+QPPAQEL+ARDLHD  W F
Sbjct: 120 KQP-SNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKF 178

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL AGDSV+FIR+EK QL LGIRRA R    + SSV
Sbjct: 179 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSV 238

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMHIG+LAAAAHA+A NS FTVF++PRAS SEFV+ L+KY KAV   +IS+GMRFR
Sbjct: 239 LSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFR 298

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+
Sbjct: 299 MLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL 358

Query: 365 TAPFFICPPPF-FRSKHPRQA 384
           T  F + P  F  R K P  A
Sbjct: 359 TT-FPMYPSLFPLRLKRPWHA 378


>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 786

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 258/362 (71%), Positives = 300/362 (82%), Gaps = 4/362 (1%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K++DG IPNYPNLP +L+
Sbjct: 23  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLI 82

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 83  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 141

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 142 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTG 201

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIR A R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 202 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAH 261

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASP+EFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 262 AAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 321

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 322 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 380

Query: 380 HP 381
           HP
Sbjct: 381 HP 382


>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
 gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
          Length = 826

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 267/418 (63%), Positives = 318/418 (76%), Gaps = 16/418 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG+KK IN  LW  CAGPL+ LPA G+ VVYFPQGHSEQV AS  K+ D ++P+YPNLP 
Sbjct: 9   GGDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPP 68

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE----FFCK 134
           +L CIL N+TLHAD E DEV+AQMTLQP   + + ALL+    L     QT+     F K
Sbjct: 69  QLFCILHNITLHADQENDEVFAQMTLQP---FSQTALLKDPFLLPDFGIQTKQTIVSFSK 125

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFS+PRRAAEK+FPPLDF+  PPAQEL+ARDLH+N W FRHIYRGQP+R
Sbjct: 126 TLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRR 185

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL AGD+VLF+RDE+ Q +LGIRRANRQ  NL +S+LSSDSM IG+
Sbjct: 186 HLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGV 245

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAA+ NS FT+FYNPRASPSEFV+PLAKY KA+H  Q+++GMRFRM  ETE+S T
Sbjct: 246 LAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSST 305

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTITGI DLDPVRW NS WR+L+VGWDESTAG+K+ RVS WEIEP+T PF +C   
Sbjct: 306 RRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLCNSS 365

Query: 375 F-FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLS-LVQWMNMQQN 428
           F  RSK PR  +++        K    W   + G    Q++  PGLS +  W+ +QQ 
Sbjct: 366 FLLRSKRPRGTEEELQ-----MKAPSIWARGEEGKFSMQNMNFPGLSGMDHWLQLQQK 418


>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
          Length = 817

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 258/362 (71%), Positives = 300/362 (82%), Gaps = 4/362 (1%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K++DG IPNYPNLP +L+
Sbjct: 23  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLI 82

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 83  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 141

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 142 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTG 201

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIR A R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 202 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAH 261

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASP+EFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 262 AAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 321

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 322 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 380

Query: 380 HP 381
           HP
Sbjct: 381 HP 382


>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
          Length = 831

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/362 (70%), Positives = 300/362 (82%), Gaps = 4/362 (1%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP +L+
Sbjct: 27  KKNLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 86

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 87  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 145

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RGQPKRHLLTTG
Sbjct: 146 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLLTTG 205

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QL LGIRRA+R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 206 WSVFVSAKRLVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLAAAAH 265

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AA+ NS FT+FYNPRA PSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 266 AASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 325

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 326 ITEVSDADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 384

Query: 380 HP 381
           HP
Sbjct: 385 HP 386


>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 773

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/455 (59%), Positives = 336/455 (73%), Gaps = 16/455 (3%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           + S  G+ G   +K +N+ELWHACAGPLV+LP++G+ VVYFPQGHSEQVAA+  K++DG 
Sbjct: 4   STSGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQ 128
           IPNYP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  +  +L + S +P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQP- 122

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
           + +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD+++QPPAQEL+ARDLHD  W FRHI+
Sbjct: 123 SNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIF 182

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQPKRHLLTTGWS+FVS KRL AGDSV+FIR+EK QL LGIR A R    + SSVLSSD
Sbjct: 183 RGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSD 242

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMHIG+LAAAAHA+A NS FTVF++PRAS SEFV+ L+KY KAV   +IS+GMRFRM+FE
Sbjct: 243 SMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFE 302

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
           TEES  RRYMGTITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F
Sbjct: 303 TEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-F 361

Query: 369 FICPPPF-FRSKHPRQAD-----DDASDLDNVFKRTMPWIGDDFGVKDSQ---SLPGLSL 419
            + P  F  R K P  A      D   DL +     + W+    G +      + P + L
Sbjct: 362 PMYPSLFPLRLKRPWHAGTSSLPDGRGDLGS----GLTWLRGGGGEQQGLLPLNYPSVGL 417

Query: 420 VQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGG 454
             WM  + + S      +    ++  + LQN+ GG
Sbjct: 418 FPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGG 452


>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
 gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
          Length = 961

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 275/445 (61%), Positives = 328/445 (73%), Gaps = 16/445 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASM--KKDIDGQIPNYPNL 76
            GEKK +NT LW  CAGPLV LP  G+HVVYFPQGHSEQV AS   K  ++ +IPNYPNL
Sbjct: 6   AGEKKAMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPNL 65

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTL 136
           P+ L+C L N+TLHAD +TDEVYAQMTLQPV + D+E  L  DL ++  K QT  FCKTL
Sbjct: 66  PAHLICHLHNITLHADPDTDEVYAQMTLQPVQN-DKEPFLTPDLGIQP-KQQTLSFCKTL 123

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFS+PRRAAEK+FPPLDF+ QPPAQEL+A+DLH+  WTFRHIYRGQP+RHL
Sbjct: 124 TASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHL 183

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS+FVS KRL AGD+VLFIRDE   LLLGIRRANRQ AN+ SS+LSSDSM IG+LA
Sbjct: 184 LTTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLA 243

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
           AAAHAA  NS FT+FYNPRAS SEFVVP  ++ KA +  ++++GMRFRM  ETE+S TRR
Sbjct: 244 AAAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRR 303

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFF 376
           YMGTITGI DLD VRW NS WR L+VGWDESTAG+++ RVS+WEIEP+TAP+F C    F
Sbjct: 304 YMGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLTAPYFPCTSSLF 363

Query: 377 RSKHPRQ------ADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQN 428
             K  R          +  +LD +  R+  W   + G  D ++L   GLSL  W+  Q  
Sbjct: 364 LRKRTRLDGMLSFCAGELDELDAI--RSQVWARAEDGKMDIRALNAAGLSLEHWLRFQHK 421

Query: 429 P--SLANAMQSSYMHSLPGSILQNL 451
           P  ++A A Q  Y  ++    LQ  
Sbjct: 422 PEAAIATASQPDYYRAMAAQALQEF 446


>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
          Length = 821

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/455 (59%), Positives = 336/455 (73%), Gaps = 16/455 (3%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           + S  G+ G   +K +N+ELWHACAGPLV+LP++G+ VVYFPQGHSEQVAA+  K++DG 
Sbjct: 4   STSGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQ 128
           IPNYP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  +  +L + S +P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQP- 122

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
           + +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD+++QPPAQEL+ARDLHD  W FRHI+
Sbjct: 123 SNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIF 182

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQPKRHLLTTGWS+FVS KRL AGDSV+FIR+EK QL LGIR A R    + SSVLSSD
Sbjct: 183 RGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSD 242

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMHIG+LAAAAHA+A NS FTVF++PRAS SEFV+ L+KY KAV   +IS+GMRFRM+FE
Sbjct: 243 SMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFE 302

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
           TEES  RRYMGTITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F
Sbjct: 303 TEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-F 361

Query: 369 FICPPPF-FRSKHPRQAD-----DDASDLDNVFKRTMPWIGDDFGVKDSQ---SLPGLSL 419
            + P  F  R K P  A      D   DL +     + W+    G +      + P + L
Sbjct: 362 PMYPSLFPLRLKRPWHAGTSSLPDGRGDLGS----GLTWLRGGGGEQQGLLPLNYPSVGL 417

Query: 420 VQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGG 454
             WM  + + S      +    ++  + LQN+ GG
Sbjct: 418 FPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGG 452


>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
           WITHOUT FERTILIZATION
 gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
 gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
 gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
          Length = 811

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/455 (59%), Positives = 336/455 (73%), Gaps = 16/455 (3%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           + S  G+ G   +K +N+ELWHACAGPLV+LP++G+ VVYFPQGHSEQVAA+  K++DG 
Sbjct: 4   STSGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQ 128
           IPNYP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  +  +L + S +P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQP- 122

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
           + +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD+++QPPAQEL+ARDLHD  W FRHI+
Sbjct: 123 SNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIF 182

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQPKRHLLTTGWS+FVS KRL AGDSV+FIR+EK QL LGIR A R    + SSVLSSD
Sbjct: 183 RGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSD 242

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMHIG+LAAAAHA+A NS FTVF++PRAS SEFV+ L+KY KAV   +IS+GMRFRM+FE
Sbjct: 243 SMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFE 302

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
           TEES  RRYMGTITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F
Sbjct: 303 TEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-F 361

Query: 369 FICPPPF-FRSKHPRQAD-----DDASDLDNVFKRTMPWIGDDFGVKDSQ---SLPGLSL 419
            + P  F  R K P  A      D   DL +     + W+    G +      + P + L
Sbjct: 362 PMYPSLFPLRLKRPWHAGTSSLPDGRGDLGS----GLTWLRGGGGEQQGLLPLNYPSVGL 417

Query: 420 VQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGG 454
             WM  + + S      +    ++  + LQN+ GG
Sbjct: 418 FPWMQQRLDLSQMGTDNNQQYQAMLAAGLQNIGGG 452


>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
          Length = 809

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 277/458 (60%), Positives = 335/458 (73%), Gaps = 13/458 (2%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           +++ AAS   +    EKK +N+ELWHACAGPLV LP   T VVYFPQGHSEQVAAS  K+
Sbjct: 2   SSSSAASIGQQPPEEEKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKE 61

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKS 124
           +DG IPNYPNLP +L+C L +VT+HAD ETDEVYAQMTLQP+ P    +  L +++ + S
Sbjct: 62  VDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMS 121

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P T +FCKTLTASDTSTHGGFSVPRRAAE++FPPLDF+ QPP QEL+ARD+HD  W F
Sbjct: 122 KQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKF 180

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSV
Sbjct: 181 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSV 240

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMHIG+LAAAAHAAA NS FT+F+NPRASPSEFV+PL+KY KAV   +IS+GMRFR
Sbjct: 241 LSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFR 300

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTIT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+
Sbjct: 301 MLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPL 360

Query: 365 TAPFFICPPPF-FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLSL 419
           T  F + P  F  R KHP  +   A   D+     + W+    G    QSL    PG+  
Sbjct: 361 TT-FPMYPSLFPLRVKHPWYSGVAALHDDS---NALMWLRGVAGEGGFQSLNFQSPGVG- 415

Query: 420 VQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGGLSQ 457
             W   + +PSL +     Y   +  +     +G L Q
Sbjct: 416 -SWGQQRLHPSLLSNDHDQYQAVVAAAAASQSDGYLKQ 452


>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 805

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 269/451 (59%), Positives = 335/451 (74%), Gaps = 8/451 (1%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           + S  G+ G   +K +N+ELWHACAGPLV+LP++G+ VVYFPQGHSEQVAA+  K++DG 
Sbjct: 4   STSGLGQQGHEGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGH 63

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQ 128
           IPNYP+LP +L+C L NVT+HAD ETDEVYAQMTLQP+ P   +E  +  +L + S +P 
Sbjct: 64  IPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPEEQKETFVPIELGIPSKQP- 122

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
           + +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD+++QPPAQEL+ARDLHD  W FRHI+
Sbjct: 123 SNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIF 182

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQPKRHLLTTGWS+FVS KRL AGDSV+FIR+EK QL LGIR A R    + SSVLSSD
Sbjct: 183 RGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSD 242

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMHIG+LAAAAHA+A NS FTVF++PRAS SEFV+ L+KY KAV   +IS+GMRFRM+FE
Sbjct: 243 SMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFE 302

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
           TEES  RRYMGTITGISDLD VRW NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F
Sbjct: 303 TEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-F 361

Query: 369 FICPPPF-FRSKHPRQADDDA-SDLDNVFKRTMPWIGDDFGVKDSQ---SLPGLSLVQWM 423
            + P  F  R K P  A   + +D        + W+    G +      + P + L  WM
Sbjct: 362 PMYPSLFPLRLKRPWHAGTSSLADGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFPWM 421

Query: 424 NMQQNPSLANAMQSSYMHSLPGSILQNLNGG 454
             + + +      +    ++  + LQN+ GG
Sbjct: 422 QQRLDLTQMGTDNNQQYQAMLAAGLQNIGGG 452


>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
 gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
          Length = 958

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/445 (61%), Positives = 328/445 (73%), Gaps = 16/445 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASM--KKDIDGQIPNYPNL 76
            GEKK +NT LW  CAGPLV LP  G+HVVYFPQGHSEQV AS   K  ++ +IPNYP+L
Sbjct: 6   AGEKKAMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPSL 65

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTL 136
           P+ L+C L N+TLHAD +TDEVYAQMTLQPV + D+E  L  DL ++  K QT  FCKTL
Sbjct: 66  PAHLICHLHNITLHADPDTDEVYAQMTLQPVQN-DKEPFLTPDLGIQP-KQQTLSFCKTL 123

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFS+PRRAAEK+FPPLDF+ QPPAQEL+A+DLH+  WTFRHIYRGQP+RHL
Sbjct: 124 TASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHL 183

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS+FVS KRL AGD+VLFIRDE   LLLGIRRANRQ AN+ SS+LSSDSM IG+LA
Sbjct: 184 LTTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLA 243

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
           AAAHAA  NS FT+FYNPRAS SEFVVP  ++ KA +  ++++GMRFRM  ETE+S TRR
Sbjct: 244 AAAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRR 303

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFF 376
           YMGTITGI DLD VRW NS WR L+VGWDESTAG+++ RVS+WEIEP+TAP+F C    F
Sbjct: 304 YMGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLTAPYFPCTSSLF 363

Query: 377 RSKHPRQ------ADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQN 428
             K  R          +  +LD +  R+  W   + G  D ++L   GLSL  W+  Q  
Sbjct: 364 LRKRTRLDGMLSFCAGELDELDAI--RSQVWARAEDGKMDIRALNAAGLSLEHWLRFQHK 421

Query: 429 P--SLANAMQSSYMHSLPGSILQNL 451
           P  ++A A Q  Y  ++    LQ  
Sbjct: 422 PEAAIATASQPDYYRAMAAQALQEF 446


>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
          Length = 833

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/441 (61%), Positives = 326/441 (73%), Gaps = 30/441 (6%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L+
Sbjct: 25  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDR------------------EALLRSDLALK 123
           C L +VT+HAD ETDEVYAQMTLQP+    R                  +A L +++ + 
Sbjct: 85  CQLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIM 144

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           S +P T +FCKTLTASDTSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W 
Sbjct: 145 SKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWK 203

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SS
Sbjct: 204 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSS 263

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           VLSSDSMHIG+LAAAAHAAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRF
Sbjct: 264 VLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRF 323

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RM+FETEES  RRYMGTIT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP
Sbjct: 324 RMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP 383

Query: 364 VTAPFFICPPPF-FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLS 418
           +T  F + P  F  R KHP  +   +   D+     + W+    G    QSL    PG+ 
Sbjct: 384 LTT-FPMYPSLFPLRVKHPWYSGVASLHDDS---NALMWLRGVAGEGGFQSLNFQSPGIG 439

Query: 419 LVQWMNMQQNPSLANAMQSSY 439
              W   + +PSL ++    Y
Sbjct: 440 --SWGQQRLHPSLLSSDHDQY 458


>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
          Length = 801

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 274/455 (60%), Positives = 335/455 (73%), Gaps = 16/455 (3%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           +T+G    S EG   EKK +N+ELWHACAGPLV+LP++G+ VVYFPQGHSEQVAA+  K+
Sbjct: 4   STSGFGHQSHEG---EKKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKE 60

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKS 124
           ++G IPNYP+LP +L+C L NVT+HAD ETDEVYAQM LQP+   + ++  +  +L + S
Sbjct: 61  VEGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMVLQPLTQEEQKDTFVPIELGIPS 120

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +P + +FCKTLTASDTSTHGGFSVPRRAAEK+FPPLD++ QPPAQEL+ARDLHDN W F
Sbjct: 121 KQP-SNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKF 179

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQPKRHLLTTGWS+FVS KRL  GDSV+FIR+E+ QLLLGIR A+R    + SS+
Sbjct: 180 RHIFRGQPKRHLLTTGWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSM 239

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           LSSDSMHIG+LAAAAHAAA NS FTVFY+PR+S SEFV+PL KY KAV   +IS+GMRFR
Sbjct: 240 LSSDSMHIGLLAAAAHAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFR 299

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEES  RRYMGTITGI DLD VRW NS WR+++VGWDESTAGE++ R S+WEIEP+
Sbjct: 300 MLFETEESSVRRYMGTITGIGDLDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEPL 359

Query: 365 TA-PFF--ICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSL 419
           T  P +  + P    R  HP  +    S  D      + W     G      L  P  SL
Sbjct: 360 TTFPMYPSLFPLRLKRPWHPGASSMHDSRGD--IASGLTWFRGGAGENGMLPLNYPSASL 417

Query: 420 VQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGG 454
             W  MQQ  SL    Q+    ++  + LQN+ GG
Sbjct: 418 FPW--MQQ--SLLGTDQNQQYQAMLAAGLQNIGGG 448


>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
          Length = 886

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 284/484 (58%), Positives = 344/484 (71%), Gaps = 29/484 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 17  GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 76

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ET EVYAQMTLQP+ P   +E  L  +L   SN+P T +FCKTLTA
Sbjct: 77  LICQLHNVTMHADAETGEVYAQMTLQPLSPEEQKEPFLPIELGAGSNQP-TNYFCKTLTA 135

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLDFS  PP QEL+ARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLLT 195

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDS++FI ++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAA
Sbjct: 196 TGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 255

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FT+FYNPR  PSEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 256 AHAAATNSRFTIFYNPR--PSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTIT ISDLD  RW NS WR+++VGWDESTAG+K+ RVS+WEIEP+ A F + P  F  R
Sbjct: 314 GTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMA-FPMYPTAFPLR 372

Query: 378 SKHPRQA-----DDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPS 430
            K P  +     +   SD    +   M W+ D  G + +QSL   GL    W+  + +  
Sbjct: 373 LKRPWASGLPMFNGGRSDEFARYSSLM-WLRD--GNRGAQSLNFQGLGASPWLQPRIDYP 429

Query: 431 LANAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNP 490
           L      +Y   +  + L+ +  G       ++L+     LP Q PQ      L   ++P
Sbjct: 430 LLGLKLDTYQQ-MAAAALEEIRAG-------DHLKQISSLLPVQQPQ-----NLSGGLDP 476

Query: 491 LGSN 494
           L  N
Sbjct: 477 LYGN 480


>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
          Length = 794

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/444 (61%), Positives = 332/444 (74%), Gaps = 16/444 (3%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           G  GEKK++N+ELWHACAGPLV+LPA G+ VVYFPQGHSEQVA S  K+++G IPNYP+L
Sbjct: 14  GQEGEKKSLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVNGHIPNYPSL 73

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKT 135
             +L+C L NVT+HAD ETDEVYAQMTLQP+   + +++ L ++L + S +P T +FCKT
Sbjct: 74  SPQLICQLHNVTMHADMETDEVYAQMTLQPLNQQEQKDSYLPAELGVPSKQP-TNYFCKT 132

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LTASDTSTHGGFSVPRRAAEK+FPPLDF+ QPPAQEL+ARDLHD  W FRHI+RGQPKRH
Sbjct: 133 LTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRHIFRGQPKRH 192

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           LLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+L
Sbjct: 193 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLL 252

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           AAAAHAAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS  MRFRM+FET+ES  R
Sbjct: 253 AAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKAVFHTRISDDMRFRMLFETDESSVR 312

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           RYMG ITGISDLDPVRW NS WR+++V WDESTAGE++ RVS+WEIEP+T  F + P  F
Sbjct: 313 RYMGRITGISDLDPVRWSNSHWRSVKVIWDESTAGERQPRVSLWEIEPLTT-FPMYPSLF 371

Query: 376 -FRSKHPRQAD-----DDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQ 427
             R K P         D+  D  N F     W+  +   +  QSL      +  WM  + 
Sbjct: 372 PLRLKRPWHPGLPTFPDNKDDESNAFM----WLRGNADERGFQSLNFQAFGIGPWMQPRF 427

Query: 428 NPSLANAMQSSYMHSLPGSILQNL 451
           +P L       Y  ++  + LQ++
Sbjct: 428 DPLLLGTDPDQY-QAMAAAALQDI 450


>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
 gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
          Length = 835

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/426 (62%), Positives = 319/426 (74%), Gaps = 18/426 (4%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
            GG+KK IN  LW  CAGPL+ LPA G+ VVYFPQGHSEQV AS  K+ D ++P+YPNLP
Sbjct: 8   AGGDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLP 67

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE----FFC 133
            +L CIL N+TLHAD E DEV+AQMTLQP   + + ALL+    L     QT+     F 
Sbjct: 68  PQLFCILHNITLHADQENDEVFAQMTLQP---FSQTALLKDPFLLPDFGIQTKQTIVSFS 124

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLTASDTSTHGGFS+PRRAAEK+FPPLDF+  PPAQEL+ARDLH+N W FRHIYRGQP+
Sbjct: 125 KTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPR 184

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS KRL AGD+VLF+RDE+ Q +LGIRRANRQ  NL +S+LSSDSM IG
Sbjct: 185 RHLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIG 244

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LAAAAHAA+ NS FT+FYNPRASPSEFV+PLAKY KA+H  Q+++GMRFRM  ETE+S 
Sbjct: 245 VLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSS 304

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP 373
           TRRYMGTITGI DLDPVRW NS WR+L+VGWDESTAG+K+ RVS WEIEP+T PF +C  
Sbjct: 305 TRRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIEPLTVPFLLCNS 364

Query: 374 PF-FRSKHPRQADDDASDL-----DNVFKRTMP--WIGDDFGVKDSQSL--PGLS-LVQW 422
            F  RSK PR      + L     +   +   P  W   + G    Q++  PGLS +  W
Sbjct: 365 SFLLRSKRPRAFSGVLNTLSLSLAEEELQMKAPSIWARGEEGKFSMQNMNFPGLSGMDHW 424

Query: 423 MNMQQN 428
           + +QQ 
Sbjct: 425 LQLQQK 430


>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
          Length = 901

 Score =  523 bits (1347), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 277/486 (56%), Positives = 336/486 (69%), Gaps = 16/486 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ELWHACAGPLV LP  G+ V YF QGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 42  GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPS 101

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+     D  L + +K  TEFFCKTLT
Sbjct: 102 QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVFPVPDFGLLRGSKHPTEFFCKTLT 160

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD++ QPP QEL+ RDLH+N WTFRHIYRGQPKRHLL
Sbjct: 161 ASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 220

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAA
Sbjct: 221 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 280

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHA AN +PF +FYNPRA P+EFV+PLAKY KA+  +Q+S+GMRF MMFETE+SG RRY
Sbjct: 281 AAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRY 340

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP---PP 374
           MGTI GISDLDP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P     
Sbjct: 341 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTSG 399

Query: 375 FFRSKHPRQADDDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLAN 433
             R  HP     + ++  ++ KR +  + D   G+    S P ++  Q M M   P   N
Sbjct: 400 LKRQLHPSYFAGE-TEWGSLIKRPLIRVSDSANGILPYASFPNMASEQLMKMMMRPH-NN 457

Query: 434 AMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGS 493
              +S+M  +  ++L    G L  M  Q  +        Q+   +   +KL  TVNP  S
Sbjct: 458 QNATSFMSEMQQNVLMGHGGLLGDMKMQQPMVRN-----QKSEMVQPESKL--TVNPSAS 510

Query: 494 NILPQQ 499
           NI  Q+
Sbjct: 511 NISGQE 516


>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
          Length = 816

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 257/362 (70%), Positives = 299/362 (82%), Gaps = 5/362 (1%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K++DG IPNYPNLP +L+
Sbjct: 23  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLI 82

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 83  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 141

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W FRHI+RG PKRHLLTTG
Sbjct: 142 TSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLLTTG 200

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGDSVLFI +EK QLLLGIR A R    + SSVLSSDSMHIG+LAAAAH
Sbjct: 201 WSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAAAAH 260

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           AAA NS FT+FYNPRASP+EFV+PL+KY KAV   +IS+GMRFRM+FETEES  RRYMGT
Sbjct: 261 AAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGT 320

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSK 379
           IT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  F  R K
Sbjct: 321 ITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVK 379

Query: 380 HP 381
           HP
Sbjct: 380 HP 381


>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
          Length = 795

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 258/383 (67%), Positives = 303/383 (79%), Gaps = 4/383 (1%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           E   GEKK +N+ELWHACAGPLV LPA  + VVYFPQGHSEQVAAS  +++   +PNYP 
Sbjct: 1   ERLAGEKKCLNSELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPG 60

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCK 134
           LP +L+C L +VT+HAD ETDEVYAQMTLQP+ P   ++A L ++L + +N+P T +FCK
Sbjct: 61  LPPQLICQLHDVTMHADAETDEVYAQMTLQPLSPQEQKDAFLPAELGIPTNQP-TNYFCK 119

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPP+QEL+ARDLHD  W FRHI+RGQPKR
Sbjct: 120 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKR 179

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL  GDSV+FI +EK QLLLGIRRA R    +  SVLSSDSMHIG+
Sbjct: 180 HLLTTGWSVFVSAKRLVTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGL 239

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAA NS FTVFYNPRASPSEFV+ L KY KAV   ++S+GMRFRM+FETEES  
Sbjct: 240 LAAAAHAAATNSRFTVFYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSV 299

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTIT ISDLDPVRW NS WR+++VGWDESTAG ++ RVS+WEIEP+T   F   P 
Sbjct: 300 RRYMGTITSISDLDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTT--FPMYPS 357

Query: 375 FFRSKHPRQADDDASDLDNVFKR 397
            F  +  R    + S L + + R
Sbjct: 358 LFPLRLKRPWLPEMSPLHSTYHR 380


>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
 gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
          Length = 524

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 264/403 (65%), Positives = 312/403 (77%), Gaps = 9/403 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
            GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHS QVAAS  K++D  IPNYP LP 
Sbjct: 15  AGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTNKEVDAHIPNYPGLPP 74

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFCKTL 136
           +L+C L N+T+HAD ETDEVYAQMTLQP+   +++   LL ++L + S  P T +FCKTL
Sbjct: 75  QLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGIPSKLP-TNYFCKTL 133

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+A+DLH N W  RHI+RGQPKRHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKLRHIFRGQPKRHL 193

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS+FVS KRL AGD+V+FI +E  QLLLGIRRANR    +  SVLSSDSMHIG+LA
Sbjct: 194 LTTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPFSVLSSDSMHIGLLA 253

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
           AAAHA A N+ FT+FYNPRASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES  RR
Sbjct: 254 AAAHATATNTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRR 313

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF- 375
           YMGTITGISDLDPV W NS WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF 
Sbjct: 314 YMGTITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFS 372

Query: 376 FRSKHPRQAD-DDASDLDNV---FKRTMPWIGDDFGVKDSQSL 414
            R K P  +         NV       + W+  D G +  QSL
Sbjct: 373 LRLKRPWPSGLPSLPGFPNVGLTMNSPLSWLRGDMGDQGMQSL 415


>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
          Length = 832

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 256/364 (70%), Positives = 305/364 (83%), Gaps = 4/364 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D   PNYP+L  +
Sbjct: 19  GEKRVLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHTPNYPSLQPQ 78

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQMTLQP+ + + +++ L ++L + S +P T +FCKTLTA
Sbjct: 79  LICQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDSYLAAELGVPSRQP-TNYFCKTLTA 137

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLD++ QPPAQELMARDLHDN W FRHI+RGQPKRHLLT
Sbjct: 138 SDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 197

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL AGDSVLFI ++K QLLLGIRRA+R    + SSVLSSDSMH+G+LAAA
Sbjct: 198 TGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRAHRPQTVMPSSVLSSDSMHLGLLAAA 257

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAA  NS FT+FYNPRAS SEFV+PLAKY KAV+  ++S+GMRFRM+FETEES  RRYM
Sbjct: 258 AHAAPTNSRFTIFYNPRASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 317

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FR 377
           GTITGI DLDP RW NS WR+++VGWDESTAG+++ RVS+WEIEP+T  F + P PF  R
Sbjct: 318 GTITGICDLDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTT-FPMYPSPFPLR 376

Query: 378 SKHP 381
            K P
Sbjct: 377 LKRP 380


>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
 gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
           Full=Auxin-responsive protein IAA24; AltName:
           Full=Transcription factor MONOPTEROS
 gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
 gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
 gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
 gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
 gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
          Length = 902

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/486 (57%), Positives = 334/486 (68%), Gaps = 16/486 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ELWHACAGPLV LP  G+ V YF QGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 45  GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPS 104

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLA-LKSNKPQTEFFCKTLT 137
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+     D   L+ +K  TEFFCKTLT
Sbjct: 105 QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVFPVPDFGMLRGSKHPTEFFCKTLT 163

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ RDLH+N WTFRHIYRGQPKRHLL
Sbjct: 164 ASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 223

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAA
Sbjct: 224 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 283

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHA AN +PF +FYNPRA P+EFV+PLAKY KA+  +Q+S+GMRF MMFETE+SG RRY
Sbjct: 284 AAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRY 343

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP---PP 374
           MGTI GISDLDP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P     
Sbjct: 344 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTSG 402

Query: 375 FFRSKHPRQADDDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLAN 433
             R  HP     + ++  ++ KR +  + D   G+    S P ++  Q M M   P   N
Sbjct: 403 LKRQLHPSYFAGE-TEWGSLIKRPLIRVPDSANGIMPYASFPSMASEQLMKMMMRPH-NN 460

Query: 434 AMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGS 493
               S+M  +  +I+    G L  M  Q  L      + Q+   +    KL  TVNP  S
Sbjct: 461 QNVPSFMSEMQQNIVMGNGGLLGDMKMQQPLM-----MNQKSEMVQPQNKL--TVNPSAS 513

Query: 494 NILPQQ 499
           N   Q+
Sbjct: 514 NTSGQE 519


>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
          Length = 890

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/486 (57%), Positives = 334/486 (68%), Gaps = 16/486 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ELWHACAGPLV LP  G+ V YF QGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 33  GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPS 92

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLA-LKSNKPQTEFFCKTLT 137
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+     D   L+ +K  TEFFCKTLT
Sbjct: 93  QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVFPVPDFGMLRGSKHPTEFFCKTLT 151

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ RDLH+N WTFRHIYRGQPKRHLL
Sbjct: 152 ASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 211

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAA
Sbjct: 212 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 271

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHA AN +PF +FYNPRA P+EFV+PLAKY KA+  +Q+S+GMRF MMFETE+SG RRY
Sbjct: 272 AAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRY 331

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP---PP 374
           MGTI GISDLDP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P     
Sbjct: 332 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTSG 390

Query: 375 FFRSKHPRQADDDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLAN 433
             R  HP     + ++  ++ KR +  + D   G+    S P ++  Q M M   P   N
Sbjct: 391 LKRQLHPSYFAGE-TEWGSLIKRPLIRVPDSANGIMPYASFPSMASEQLMKMMMRPH-NN 448

Query: 434 AMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGS 493
               S+M  +  +I+    G L  M  Q  L      + Q+   +    KL  TVNP  S
Sbjct: 449 QNVPSFMSEMQQNIVMGNGGLLGDMKMQQPLM-----MNQKSEMVQPQNKL--TVNPSAS 501

Query: 494 NILPQQ 499
           N   Q+
Sbjct: 502 NTSGQE 507


>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
          Length = 902

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/486 (57%), Positives = 334/486 (68%), Gaps = 16/486 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ELWHACAGPLV LP  G+ V YF QGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 45  GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPS 104

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLA-LKSNKPQTEFFCKTLT 137
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+     D   L+ +K  TEFFCKTLT
Sbjct: 105 QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVFPVPDFGMLRGSKHPTEFFCKTLT 163

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ RDLH+N WTFRHIYRGQPKRHLL
Sbjct: 164 ASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 223

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAA
Sbjct: 224 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 283

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHA AN +PF +FYNPRA P+EFV+PLAKY KA+  +Q+S+GMRF MMFETE+SG RRY
Sbjct: 284 AAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRY 343

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP---PP 374
           MGTI GISDLDP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P     
Sbjct: 344 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTSG 402

Query: 375 FFRSKHPRQADDDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLAN 433
             R  HP     + ++  ++ KR +  + D   G+    S P ++  Q M M   P   N
Sbjct: 403 LKRQLHPSYFAGE-TEWGSLIKRPLIRVPDSANGIMPYASFPSMASEQLMKMMMRPH-NN 460

Query: 434 AMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGS 493
               S+M  +  +I+    G L  M  Q  L      + Q+   +    KL  TVNP  S
Sbjct: 461 QNVPSFMSEMQQNIVMGNGGLLGDMKMQQPLM-----MNQKSEMVQPQNKL--TVNPSAS 513

Query: 494 NILPQQ 499
           N   Q+
Sbjct: 514 NTSGQE 519


>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
          Length = 850

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 278/486 (57%), Positives = 334/486 (68%), Gaps = 16/486 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ELWHACAGPLV LP  G+ V YF QGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 34  GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPS 93

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLA-LKSNKPQTEFFCKTLT 137
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+     D   L+ +K  TEFFCKTLT
Sbjct: 94  QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVFPVPDFGMLRGSKHPTEFFCKTLT 152

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD+S QPP QEL+ RDLH+N WTFRHIYRGQPKRHLL
Sbjct: 153 ASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 212

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAA
Sbjct: 213 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 272

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHA AN +PF +FYNPRA P+EFV+PLAKY KA+  +Q+S+GMRF MMFETE+SG RRY
Sbjct: 273 AAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRRY 332

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP---PP 374
           MGTI GISDLDP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P     
Sbjct: 333 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTSG 391

Query: 375 FFRSKHPRQADDDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLAN 433
             R  HP     + ++  ++ KR +  + D   G+    S P ++  Q M M   P   N
Sbjct: 392 LKRQLHPSYFAGE-TEWGSLIKRPLIRVPDSANGIMPYASFPSMASEQLMKMMMRPH-NN 449

Query: 434 AMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGS 493
               S+M  +  +I+    G L  M  Q  L      + Q+   +    KL  TVNP  S
Sbjct: 450 QNVPSFMSEMQQNIVMGNGGLLGDMKMQQPLM-----MNQKSEMVQPQNKL--TVNPSAS 502

Query: 494 NILPQQ 499
           N   Q+
Sbjct: 503 NTSGQE 508


>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
          Length = 867

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/449 (58%), Positives = 320/449 (71%), Gaps = 12/449 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 43  GTRKPVINSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNYPNLPS 102

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+     +  L + +K  +EFFCKTLT
Sbjct: 103 QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVFPVPEFGLLRGSKHPSEFFCKTLT 161

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD++ QPP QEL+ RDLH+N WTFRHIYRGQPKRHLL
Sbjct: 162 ASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 221

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAA
Sbjct: 222 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 281

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHA AN +PF +FYNPRA P+EFV+P+AKY KA+  +Q+S+ MRF MMFETE+SG RRY
Sbjct: 282 AAHATANRTPFLIFYNPRACPAEFVIPIAKYRKAICGSQLSVSMRFGMMFETEDSGKRRY 341

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP---PP 374
           MGTI GISDLDP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P     
Sbjct: 342 MGTIVGISDLDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTSG 400

Query: 375 FFRSKHPRQADDDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLAN 433
             R  HP     + ++  ++ KR    + D   G+    S P ++  Q M M   P  +N
Sbjct: 401 LKRQLHPSYFAGE-TEWGSLIKRPFIRVSDSTNGILPYASFPNMASEQLMRMMMRPHNSN 459

Query: 434 A----MQSSYMHSLPGSILQNLNGGLSQM 458
           +      +S+M  +  ++L    G L  M
Sbjct: 460 SNNQNATTSFMSEMQQNVLMRQGGLLGDM 488


>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 903

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 276/482 (57%), Positives = 333/482 (69%), Gaps = 17/482 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ELWHACAGPLV LP  G+ V YF QGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 45  GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPS 104

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL--KSNKPQTEFFCKTL 136
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+     D  +    +K  TEFFCKTL
Sbjct: 105 QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVFPVPDFGMLRGGSKHPTEFFCKTL 163

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSVPRRAAEK+FPPLD++ QPP QEL+ RDLH+N WTFRHIYRGQPKRHL
Sbjct: 164 TASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHL 223

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LA
Sbjct: 224 LTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLA 283

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
           AAAHA AN +PF +FYNPRA P+EFV+PLAKY KA+  +Q+S+GMRF MMFETE+SG RR
Sbjct: 284 AAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKRR 343

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP---P 373
           YMGTI GISDLDP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P    
Sbjct: 344 YMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTS 402

Query: 374 PFFRSKHPRQADDDASDLDNVFKRTMPWIGDDF-GVKDSQSLPGLSLVQWMNMQQNPSLA 432
              R  HP     + ++  ++ KR +  + D   G+    S P ++  Q M M   P   
Sbjct: 403 GLKRQLHPSYFAGE-TEWGSLIKRPLIRVPDSANGIMPYASFPNMASEQLMKMMMRPH-N 460

Query: 433 NAMQSSYMHSLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLG 492
           N    S+M  +  +++    G L  M  Q  +  + +S   Q PQ     KL  TVNP  
Sbjct: 461 NQNVPSFMSEMQQNVVMGHGGLLGDMKMQQPMMMSRKSEMLQ-PQ----NKL--TVNPSA 513

Query: 493 SN 494
           SN
Sbjct: 514 SN 515


>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
          Length = 780

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/435 (60%), Positives = 323/435 (74%), Gaps = 7/435 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEKK +N+ELWHACAGPLV+LP++G+ VVYFPQGHSEQVAA+  K+++G IPNYP LP +
Sbjct: 15  GEKKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPTLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQM LQP+   + ++  +  +L + S +P + +FCKTLTA
Sbjct: 75  LICQLHNVTMHADLETDEVYAQMVLQPLTQEEQKDTFVPIELGVPSKQP-SNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAEK+FPPLD++ QPPAQEL+A+DLHDN W FRHI+RGQPKRHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFRHIFRGQPKRHLLT 193

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS+FVS KRL  GDSV+FIR+E+ QLLLGIR A R    + SS+LSSDSMHIG+LAAA
Sbjct: 194 TGWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHATRPQTIVPSSMLSSDSMHIGLLAAA 253

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHAAA NS FTVFY+PR+S SEFV+PL KY KAV   +IS+GMRFRM+FETEES  RRYM
Sbjct: 254 AHAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRRYM 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTITGI DLD V W NS WR+++VGWDESTAGE++ R S+WEIEP+T   F   P  F  
Sbjct: 314 GTITGIGDLDSVLWPNSHWRSVKVGWDESTAGERQARASLWEIEPLTT--FPMYPSLFPL 371

Query: 379 KHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPSLANAMQ 436
           +  R     AS   +  +  + W+    G      L  P  ++  WM  + + SL    Q
Sbjct: 372 RLKRPWHPGASSFQDS-RGDLTWLRGGAGENGLLPLNYPSPNVFPWMQQRLDLSLLGTDQ 430

Query: 437 SSYMHSLPGSILQNL 451
           +    ++  + LQN 
Sbjct: 431 NQQYQAMLAAGLQNF 445


>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
          Length = 898

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 254/363 (69%), Positives = 295/363 (81%), Gaps = 15/363 (4%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E + +N+ELWHACAGPLV+LPA G+           +VAAS  K++D QIPNYP+LP +L
Sbjct: 16  EPRCLNSELWHACAGPLVSLPAVGS-----------RVAASTNKEVDSQIPNYPSLPPQL 64

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L NVT+HAD ETDEVYAQMTLQP+ + + ++  L +DL   S +P T +FCKTLTAS
Sbjct: 65  ICQLHNVTMHADVETDEVYAQMTLQPLSAQEQKDPYLPADLGTPSKQP-TNYFCKTLTAS 123

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLH N W FRHI+RGQPKRHLLTT
Sbjct: 124 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTT 183

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGDSVLFI +E  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAA
Sbjct: 184 GWSVFVSAKRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAA 243

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAAA NS FT+FYNPRASPSEFV+PL KY KAV+  ++S+GMRFRM+FETEES  RRYMG
Sbjct: 244 HAAATNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMG 303

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TITGISDLDPVRW NS WR+++VGWDESTAGEK+ RVS+WEIEP+T  F + P  F  R 
Sbjct: 304 TITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTT-FPMYPSSFPLRF 362

Query: 379 KHP 381
           K P
Sbjct: 363 KRP 365


>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
          Length = 836

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 260/447 (58%), Positives = 317/447 (70%), Gaps = 17/447 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ LWHACAGPLV LP  G+ V YF QGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 33  GTRKPVINSMLWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPS 92

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+ L   DL L + +K  +E+FCKTLT
Sbjct: 93  QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVLPVPDLGLLRGSKHPSEYFCKTLT 151

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAEK+FPPLD++ QPP QEL+ RDLH+N WTFRHIYRGQPKRHLL
Sbjct: 152 ASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 211

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAA
Sbjct: 212 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 271

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AAHA AN +PF +F+NPRA P+EFV+PL KY KA+  +Q+S+GMRF MMFETE+SG RRY
Sbjct: 272 AAHATANRTPFLIFFNPRACPAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGKRRY 331

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP---PP 374
           MGTI GISDLDP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P     
Sbjct: 332 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFPSLTSG 390

Query: 375 FFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANA 434
             R  HP     + +D  ++ KR +P+           + P ++  Q M M   P     
Sbjct: 391 LKRQLHPSYFAGE-NDWGSLIKRPLPY----------ATFPNMASEQLMKMMMRPHNNQN 439

Query: 435 MQSSYMHSLPGSILQNLNGGLSQMPQQ 461
             +S+M  +  ++L    G L  +  Q
Sbjct: 440 AVTSFMPEMQQNVLMGHGGLLGDVKMQ 466


>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
 gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
           AltName: Full=OsMP; AltName: Full=Protein
           MONOPTEROS-like
 gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
           AltName: Full=OsMP; AltName: Full=Protein
           MONOPTEROS-like
 gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
 gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
          Length = 955

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/343 (71%), Positives = 280/343 (81%), Gaps = 1/343 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ +K  + +IPNYPNLPS+
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD +TDEVYAQMTLQPV S      + +  A   +K  TE+FCK LTAS
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEYFCKNLTAS 150

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 151 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 210

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLLLG+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 211 GWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAA 270

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++ S FT++YNPR SPS FV+P+A+Y KA +  Q S+GMRF MMFETEES  RRY G
Sbjct: 271 HAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYM-QPSVGMRFAMMFETEESSKRRYTG 329

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           T+ GISD DP+RW NS+WRNLQV WDE   GE+  RVSIW+IE
Sbjct: 330 TVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372


>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
          Length = 955

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/343 (71%), Positives = 279/343 (81%), Gaps = 1/343 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ +K  + +IPNYPNLPS+
Sbjct: 32  GAKKVINSELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNYPNLPSQ 91

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+T+HAD ETDEVYAQMTLQPV S      + +  +   +K   E+FCK LTAS
Sbjct: 92  LLCQVHNITMHADKETDEVYAQMTLQPVNSETDVFPIPALGSYAKSKHPPEYFCKNLTAS 151

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 152 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 211

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLLLG+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 212 GWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIGVLAAAA 271

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++ S FT++YNPR SPS FVVPLA+Y KA +  Q S+GMRF MMFETEES  RRY G
Sbjct: 272 HAASSGSSFTIYYNPRTSPSPFVVPLARYNKANYVQQ-SVGMRFAMMFETEESSKRRYTG 330

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TI G+SD DP+RW NS+WRNLQV WDE   GE+  RVSIW+IE
Sbjct: 331 TIVGVSDYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 373


>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
 gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
          Length = 946

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/343 (71%), Positives = 278/343 (81%), Gaps = 1/343 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ KK  + +IPNYP+LPS+
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 90

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD ETDE+YAQMTLQPV S      + S  A   +K  TE+FCK LTAS
Sbjct: 91  LLCQVHNITLHADKETDEIYAQMTLQPVHSETDVFPIPSLGAYTKSKHPTEYFCKNLTAS 150

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 151 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 210

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 211 GWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAA 270

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++   FT++YNPR SPS FV+PLA+Y KA +  Q S+GMRF MMFETEES  RR  G
Sbjct: 271 HAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYL-QPSVGMRFAMMFETEESIKRRCTG 329

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TI GISD DP+RW NS+WRNLQV WDE   GE+  RVS+W+IE
Sbjct: 330 TIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372


>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
 gi|224028907|gb|ACN33529.1| unknown [Zea mays]
 gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
          Length = 936

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 241/343 (70%), Positives = 277/343 (80%), Gaps = 1/343 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ KK  + +IPNYP+LPS+
Sbjct: 32  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 91

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD ETDE+YAQMTLQPV S      + +  A   +K  +E+FCK LTAS
Sbjct: 92  LLCQVHNITLHADKETDEIYAQMTLQPVHSETDVFPIPTLGAYTKSKHSSEYFCKNLTAS 151

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 152 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 211

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 212 GWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAA 271

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++   FTV+YNPR SPS FV+PLA+Y  A +  Q S+GMRF MMFETEES  RR  G
Sbjct: 272 HAASSGGSFTVYYNPRTSPSPFVIPLARYNTATYL-QPSVGMRFAMMFETEESSKRRCTG 330

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TI GISD +P+RW NS+WRNLQV WDE   GE+  RVS+W+IE
Sbjct: 331 TIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373


>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
          Length = 935

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/343 (70%), Positives = 277/343 (80%), Gaps = 1/343 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ KK  + +IPNYP+LPS+
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 90

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD ETDE+YAQMTLQPV S      + +  A   +K  +E+FCK LTAS
Sbjct: 91  LLCQVHNITLHADKETDEIYAQMTLQPVHSETDVFPIPTLGAYTKSKHPSEYFCKNLTAS 150

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 151 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 210

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 211 GWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAA 270

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++   FTV+YNPR SPS FV+PLA+Y  A +  Q S+GMRF MMFETEES  RR  G
Sbjct: 271 HAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYL-QPSVGMRFAMMFETEESSKRRCTG 329

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TI GISD +P+RW NS+WRNLQV WDE   GE+  RVS+W+IE
Sbjct: 330 TIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372


>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
          Length = 936

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 241/343 (70%), Positives = 277/343 (80%), Gaps = 1/343 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ KK  + +IPNYP+LPS+
Sbjct: 32  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 91

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD ETDE+YAQMTLQPV S      + +  A   +K  +E+FCK LTAS
Sbjct: 92  LLCQVHNITLHADKETDEIYAQMTLQPVHSETDVFPIPTLGAYTKSKHPSEYFCKNLTAS 151

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 152 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 211

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 212 GWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAA 271

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++   FTV+YNPR SPS FV+PLA+Y  A +  Q S+GMRF MMFETEES  RR  G
Sbjct: 272 HAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYL-QPSVGMRFAMMFETEESSKRRCTG 330

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TI GISD +P+RW NS+WRNLQV WDE   GE+  RVS+W+IE
Sbjct: 331 TIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373


>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
          Length = 945

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 240/343 (69%), Positives = 275/343 (80%), Gaps = 1/343 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ KK  + +IPNYP+LP +
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQ 90

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD ETDE+Y QMTLQP+ S      + +  A   +K  TE+FCK LTAS
Sbjct: 91  LLCQVHNITLHADKETDEIYCQMTLQPLHSETDVFPIPTLGAYTKSKHPTEYFCKNLTAS 150

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 151 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 210

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 211 GWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAA 270

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++   FT++YNPR SPS FV+PLA+Y KA +  Q S+GMRF MMFETEES  RR  G
Sbjct: 271 HAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYL-QPSVGMRFAMMFETEESSKRRCTG 329

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
            I GISD DP+RW NS+WRNLQV WDE   GE+  RVSIW+IE
Sbjct: 330 AIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372


>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
 gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
          Length = 363

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/343 (69%), Positives = 274/343 (79%), Gaps = 15/343 (4%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +K IN+ELW+ACAGPLV+LP  G+ V YFPQGHSEQVA S ++    QIPNYPNLPS+
Sbjct: 12  GIRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPNYPNLPSQ 71

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + NVTLHAD +TDE+YAQM+LQPV + +++     D  L+ +K  +EFFCKTLTAS
Sbjct: 72  LLCQVHNVTLHADKDTDEIYAQMSLQPVNT-EKDVFPIPDFGLRPSKHPSEFFCKTLTAS 130

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLD++MQPP QEL+ RDLHDN WTFRHIYRGQPKRHLLTT
Sbjct: 131 DTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 190

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LAAAA
Sbjct: 191 GWSLFVGSKRLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSADSMHIGVLAAAA 250

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA AN SPFT+FYNPRA PS+FV+PL K+ KAV   Q+S+GMRF MMFETEESG RRYMG
Sbjct: 251 HATANRSPFTIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMFETEESGKRRYMG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TI GISDL              V WDE    +K+NRVS WEIE
Sbjct: 311 TIVGISDL--------------VEWDEPGCSDKQNRVSSWEIE 339


>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 955

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 239/345 (69%), Positives = 278/345 (80%), Gaps = 3/345 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ KK  + +IPNYP+LPS+
Sbjct: 36  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNYPSLPSQ 95

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+T+HAD +TDEVYAQMTLQPV S      ++S  +   +K   E+FCK LTAS
Sbjct: 96  LLCQVHNITMHADKDTDEVYAQMTLQPVNSETDVFPIQSLGSYAKSKHPAEYFCKNLTAS 155

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 156 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 215

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRA  Q   LSSSVLS+DSMHIG+LAAAA
Sbjct: 216 GWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIGVLAAAA 275

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++ S FT++YNPR SPS FVVP+ +Y KA++  Q S+GMR  MM ETEESG RR+ G
Sbjct: 276 HAASSGSSFTIYYNPRTSPSPFVVPMTRYNKAIYIQQ-SVGMRIAMMSETEESGKRRHTG 334

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDEST--AGEKRNRVSIWEIE 362
           TI G+SD DP+RW NS+WRNLQV WDE     GE+  RVSIW+IE
Sbjct: 335 TIVGVSDSDPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIE 379


>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
          Length = 935

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/343 (69%), Positives = 276/343 (80%), Gaps = 2/343 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ KK  + +IPNYP+LPS+
Sbjct: 32  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQ 91

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD ETDE+YAQMTLQPV S      + +  A   +K  +E+FCK LTAS
Sbjct: 92  LLCQVHNITLHADKETDEIYAQMTLQPVHSETDVFPIPTLGAYTKSKHPSEYFCKNLTAS 151

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYR QPKRHLLTT
Sbjct: 152 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKRHLLTT 210

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLL+G+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 211 GWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGVLAAAA 270

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++   FTV+YNPR SPS FV+PLA+Y  A +  Q S+GMRF MMFETEES  RR  G
Sbjct: 271 HAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYL-QPSVGMRFAMMFETEESSKRRCTG 329

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TI GISD +P+RW NS+WRNLQV WDE   GE+  RVS+W+IE
Sbjct: 330 TIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372


>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
          Length = 958

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 240/356 (67%), Positives = 275/356 (77%), Gaps = 14/356 (3%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ KK  + +IPNYP+LP +
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQ 90

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD ETDE+Y QMTLQP+ S      + +  A   +K  TE+FCK LTAS
Sbjct: 91  LLCQVHNITLHADKETDEIYCQMTLQPLHSETDVFPIPTLGAYTKSKHPTEYFCKNLTAS 150

Query: 140 DTSTHGGFSVPRRAAEKIFP-------------PLDFSMQPPAQELMARDLHDNIWTFRH 186
           DTSTHGGFSVPRRAAEK+FP             P D+SMQPP QEL+ RDLHDN+WTFRH
Sbjct: 151 DTSTHGGFSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNMWTFRH 210

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRGQPKRHLLTTGWSLFV  KRL AGDSVLFIRDEK QLL+G+RRA RQ   LSSSVLS
Sbjct: 211 IYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLS 270

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           +DSMHIG+LAAAAHAA++   FT++YNPR SPS FV+PLA+Y KA +  Q S+GMRF MM
Sbjct: 271 TDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYL-QPSVGMRFAMM 329

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           FETEES  RR  G I GISD DP+RW NS+WRNLQV WDE   GE+  RVSIW+IE
Sbjct: 330 FETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 385


>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
 gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
          Length = 954

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 241/344 (70%), Positives = 275/344 (79%), Gaps = 4/344 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ +K  + +IPNYPNLPS+
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD +TDEVYAQMTLQPV S      + +  A   +K  TE+FCK LTAS
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEYFCKNLTAS 150

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 151 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 210

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIRDEK QLLLG+RRA RQ   LSSSVLS+DSMHIG+LAAAA
Sbjct: 211 GWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAA 270

Query: 260 HAAANNSPFTVFYN-PRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           HAA++   F   +N  R SPS FV+P+A+Y KA +  Q S+GMRF MMFETEES  RRY 
Sbjct: 271 HAASSA--FGHSWNLHRTSPSPFVIPVARYNKATYM-QPSVGMRFAMMFETEESSKRRYT 327

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           GT+ GISD DP+RW NS+WRNLQV WDE   GE+  RVSIW+IE
Sbjct: 328 GTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 371


>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
          Length = 470

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/356 (66%), Positives = 273/356 (76%), Gaps = 14/356 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  K  IN+ELWHACAGPLV LP  G+ V YF QGHSEQVA S ++    Q+PNYPNLPS
Sbjct: 39  GTRKPVINSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPS 98

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL--KSNKPQTEFFCKTL 136
           +L+C + NVTLHAD ++DE+YAQM+LQPV S +R+     D  L  +S  P  EFFCKTL
Sbjct: 99  QLMCQVHNVTLHADKDSDEIYAQMSLQPVHS-ERDVFPVPDFGLLNRSKHP-AEFFCKTL 156

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSVPRRAAEK+FPPLD++ QPP QEL+ RDLH+N WTFRHIYRGQPKRHL
Sbjct: 157 TASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHL 216

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWSLFV  KRL AGDSVLFIRDEK QL++G+RRANRQ   L SSVLS+DSMHIG+LA
Sbjct: 217 LTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLA 276

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
           AAAHA AN +PF +FYNPRA P+EFV+PLAKY KA+   Q+S GMRF MMFETE+SG R 
Sbjct: 277 AAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKR- 335

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP 372
                   SD+DP+RW  S+WRNLQV WDE    +K  RVS W+IE      FI P
Sbjct: 336 --------SDMDPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIE-TPESLFIFP 382


>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
          Length = 1045

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 257/383 (67%), Positives = 298/383 (77%), Gaps = 24/383 (6%)

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
           N+   EFFCKTLTASDTSTHGGFSVPRRAAEKIFP LDFSMQPP QEL+A+D+HDN WTF
Sbjct: 1   NRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTF 60

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHIYRGQPKRHLLTTGWS+FVS KRLFAGDSVLFIRD K QLLLGIRRANRQ   LSSSV
Sbjct: 61  RHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSV 120

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           +SSDSMHIG+LAAAAHA ANNSPFT+FYNPRA+P+EFVVPLAKY KA+++ Q+SLGMRFR
Sbjct: 121 ISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYA-QVSLGMRFR 179

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M+FETEE G RRYMGT+TGISDLDPVRWKNSQWRNLQ+GWDES AG++ +RVS+W+IEPV
Sbjct: 180 MIFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV 239

Query: 365 TAPFFICPPPFFRSKHPRQAD--DDASDLDNVFKRTMPWIGDDFGVKDSQS--LPGLSLV 420
             PF+ICPPPFFR +   Q    DD +D+++  KR MPW+ +   +KD  S   PGLSLV
Sbjct: 240 LTPFYICPPPFFRPRFSGQPGMPDDETDMESALKRAMPWLDNSLEMKDPSSTIFPGLSLV 299

Query: 421 QWMNM-QQNPSL-ANAMQSSYMHSL--PGSILQNLNGGLS--------QMPQ----QNNL 464
           QWMNM QQN  L + A Q  +  S+  P + L N  GG          Q P      +NL
Sbjct: 300 QWMNMQQQNGQLPSAAAQPGFFPSMLSPTAALHNNLGGTDDPSKLLSFQTPHGGISSSNL 359

Query: 465 QYTGQSLPQQVPQIDQLAKLPST 487
           Q+  Q+  QQ P + QL + P+T
Sbjct: 360 QFNKQN--QQAP-MSQLPQPPTT 379



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 744 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 790

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 791 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 838

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 839 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 888

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 889 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 923


>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
 gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
          Length = 821

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/422 (61%), Positives = 304/422 (72%), Gaps = 23/422 (5%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K++DG IPNYPNLP +L+
Sbjct: 25  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLI 84

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           C L +VT+HAD ETDEVYAQMTLQP+ P    +A L +++ + S +P T +FCKTLTASD
Sbjct: 85  CQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDAYLPAEMGIMSKQP-TNYFCKTLTASD 143

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG------QPKR 194
           TSTHGGFSVPRRAAE++FPPL  S       L  R L   I+       G      QPKR
Sbjct: 144 TSTHGGFSVPRRAAERVFPPLVIS----HSSLQHRSLLHGIFMMSSGNSGISSEASQPKR 199

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SSVLSSDSMHIG+
Sbjct: 200 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGL 259

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHAAA NS FT+FYNPRASPSEFV+PL+KY KAV   +IS+GMRFRM+FETEES  
Sbjct: 260 LAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSV 319

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           RRYMGTIT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP+T  F + P  
Sbjct: 320 RRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTT-FPMYPSL 378

Query: 375 F-FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLSLVQWMNMQQNP 429
           F  R KHP  +   A   D+     + W+    G    QSL    PG+    W   + +P
Sbjct: 379 FPLRVKHPWYSGVAALHDDS---NALMWLRGVAGEGGFQSLNFQSPGIG--SWGQQRLHP 433

Query: 430 SL 431
           SL
Sbjct: 434 SL 435


>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
 gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
          Length = 316

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 221/306 (72%), Positives = 254/306 (83%), Gaps = 1/306 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +K IN+ELW+ACAGPLV+LP  G+ V YFPQGHSEQVA S K+    QIPNYPNLPS+
Sbjct: 12  GTRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPNLPSQ 71

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + NVTLHAD +TDE++AQM+LQPV S +++     D  LK +K  +EFFCK LTAS
Sbjct: 72  LLCQVHNVTLHADKDTDEIHAQMSLQPVNS-EKDVFPVPDFGLKPSKHPSEFFCKALTAS 130

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FPPLD+SMQPP+QEL+ RDLHDN WTFRHIYRGQPKRHLLTT
Sbjct: 131 DTSTHGGFSVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKRHLLTT 190

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFIR+EK  L++G+R ANRQ   L SSVLS+DSMHIG+LAAAA
Sbjct: 191 GWSLFVGSKRLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLSADSMHIGVLAAAA 250

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA N SPFT+FYNPRA PS+FV+PL K+ K V   Q+S+GMRF MMFETEESG RRYMG
Sbjct: 251 HAAGNRSPFTIFYNPRACPSDFVIPLIKFRKTVFGTQVSVGMRFGMMFETEESGKRRYMG 310

Query: 320 TITGIS 325
           TI GIS
Sbjct: 311 TIVGIS 316


>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
          Length = 856

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 222/320 (69%), Positives = 263/320 (82%), Gaps = 4/320 (1%)

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD-REALLRSDLAL 122
           K++D  IPNYP+LP +L+C L +V +HAD ETDEVYAQMTLQP+   + ++A L ++L  
Sbjct: 3   KEVDTHIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQEQKDAYLPAELGT 62

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
            S +P T +FCK LTASDTSTHGGFSVPRRAAEK+FPPLDF+ QPP+QEL+ARDLH N W
Sbjct: 63  PSRQP-TNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLHGNEW 121

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS 242
            FRHI+RGQPKRHLLTTGWS+FVS KRL AGD+V+FI +EK QLLLGIRR NR  + + S
Sbjct: 122 KFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQSVMPS 181

Query: 243 SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMR 302
           SVLSSDSMHIG+LAAAAHAAA NS FTVFY PRASPSEFV+PL +Y KAV   +IS+GMR
Sbjct: 182 SVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRISVGMR 241

Query: 303 FRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           FRM+FETEES  RRYMGTITGI DLDP RW NS WR+++VGWDESTAGE++ RVS+WEIE
Sbjct: 242 FRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSLWEIE 301

Query: 363 PVTAPFFICPPPF-FRSKHP 381
           P+T  F + P PF  R + P
Sbjct: 302 PLTT-FPMYPSPFPLRLRRP 320


>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
 gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
          Length = 926

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/343 (65%), Positives = 256/343 (74%), Gaps = 30/343 (8%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ +K  + +IPNYPNLPS+
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD +TDEVYAQMTLQPV S      + +  A   +K  TE+FCK LTAS
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEYFCKNLTAS 150

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 151 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 210

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSLFV  KRL AGDSVLFI                             SMHIG+LAAAA
Sbjct: 211 GWSLFVGAKRLKAGDSVLFI-----------------------------SMHIGVLAAAA 241

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HAA++ S FT++YNPR SPS FV+P+A+Y KA +  Q S+GMRF MMFETEES  RRY G
Sbjct: 242 HAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYM-QPSVGMRFAMMFETEESSKRRYTG 300

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           T+ GISD DP+RW NS+WRNLQV WDE   GE+  RVSIW+IE
Sbjct: 301 TVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 343


>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
          Length = 831

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 242/441 (54%), Positives = 291/441 (65%), Gaps = 71/441 (16%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK +N+ELWHACAGPLV LP  GT VVYFPQGHSEQVAAS  K+++G IPNYPNLP++L+
Sbjct: 25  KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDR------------------EALLRSDLALK 123
           C L +VT+HAD ETDEVYAQMTLQP+    R                  +A L +++ + 
Sbjct: 85  CQLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIM 144

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           S +P T +FCKTLTASDTSTHGGFSVPRRAAE++FPPLDF+ QPPAQEL+ARD+HD  W 
Sbjct: 145 SKQP-TNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWK 203

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI +EK QLLLGIRRA+R    + SS
Sbjct: 204 FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSS 263

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           VLSSDSMHIG+LAAAAHAAA NS FT+FYNP                             
Sbjct: 264 VLSSDSMHIGLLAAAAHAAATNSRFTIFYNP----------------------------- 294

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
                       RYMGTIT +SD DPVRW +S WR+++VGWDESTAGE+  RVS+WEIEP
Sbjct: 295 ------------RYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEP 342

Query: 364 VTAPFFICPPPF-FRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSL----PGLS 418
           +T  F + P  F  R KHP  +   +   D+     + W+    G    QSL    PG+ 
Sbjct: 343 LTT-FPMYPSLFPLRVKHPWYSGVASLHDDS---NALMWLRGVAGEGGFQSLNFQSPGIG 398

Query: 419 LVQWMNMQQNPSLANAMQSSY 439
              W   + +PSL ++    Y
Sbjct: 399 --SWGQQRLHPSLLSSDHDQY 417


>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
 gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
          Length = 795

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/364 (60%), Positives = 268/364 (73%), Gaps = 3/364 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G    +++E+WHACAGPLV LP  G  VVYFPQGH EQVAAS  +  D Q+P+Y NLPS+
Sbjct: 28  GNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHY-NLPSQ 86

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           + C LLN+TL AD ETDEV+AQMTL P      +++   D      K +   FCK LT+S
Sbjct: 87  IYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCPKRKLSMFCKNLTSS 146

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAE+  PPLD+   PPAQEL+A+DLH   W FRHIYRGQP+RHLLTT
Sbjct: 147 DTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTT 206

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLS-SSVLSSDSMHIGILAAA 258
           GWS+FVS K+L AGD+VLF+R +  +L +G+RRA RQ  +++ SS+LSS SMH+G+LAAA
Sbjct: 207 GWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAA 266

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHA +  + FT+FYNPRASP+EFVVP  KY KA   N +S+GMRF+M FETEES  RRYM
Sbjct: 267 AHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHN-LSVGMRFKMRFETEESSERRYM 325

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTITG+ D+D  RW NS+WR LQVGWDE TA E++ RVS WEIEP  AP    PP   R 
Sbjct: 326 GTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIAPNVANPPTTQRV 385

Query: 379 KHPR 382
           K  R
Sbjct: 386 KKFR 389


>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
 gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
          Length = 396

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/361 (60%), Positives = 268/361 (74%), Gaps = 3/361 (0%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G    +++E+WHACAGPLV LP  G  VVYFPQGH EQVAAS  +  D Q+P+Y NLPS+
Sbjct: 28  GNTNALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHY-NLPSQ 86

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           + C LLN+TL AD ETDEV+AQMTL P      +++   D      K +   FCK LT+S
Sbjct: 87  IYCRLLNLTLGADRETDEVFAQMTLVPENEQGDQSIDTEDELSPCPKRKLSMFCKNLTSS 146

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAE+  PPLD+   PPAQEL+A+DLH   W FRHIYRGQP+RHLLTT
Sbjct: 147 DTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTT 206

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLS-SSVLSSDSMHIGILAAA 258
           GWS+FVS K+L AGD+VLF+R +  +L +G+RRA RQ  +++ SS+LSS SMH+G+LAAA
Sbjct: 207 GWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAAA 266

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           AHA +  + FT+FYNPRASP+EFVVP  KY KA   N +S+GMRF+M FETEES  RRYM
Sbjct: 267 AHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHN-LSVGMRFKMRFETEESSERRYM 325

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTITG+ D+D  RW NS+WR LQVGWDE TA E++ RVS WEIEP  AP    PP   R+
Sbjct: 326 GTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIAPNVANPPTTQRA 385

Query: 379 K 379
           +
Sbjct: 386 R 386


>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
          Length = 958

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/373 (56%), Positives = 263/373 (70%), Gaps = 8/373 (2%)

Query: 1   MKTPANTAGAASNSGEGGGG---EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ 57
           + +P   +  + N  E  GG    K +I  ELWHACAGPL++LP  G+ VVYFPQGH EQ
Sbjct: 5   LNSPNGYSNGSFNGNEDMGGAALNKTSICLELWHACAGPLISLPRKGSLVVYFPQGHMEQ 64

Query: 58  VAASMKKDIDGQIPNYP-NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPS---YDRE 113
           V  S+K     Q    P +LP ++ C +LNV LHAD ETDEVYAQ+TL P P     D E
Sbjct: 65  VTTSLKHQCLEQRQMRPYDLPPQIFCRVLNVNLHADQETDEVYAQVTLVPEPEPAEKDLE 124

Query: 114 ALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELM 173
                + A   NK     FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++ Q P+QEL+
Sbjct: 125 EEEEDEEAGVLNKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELV 184

Query: 174 ARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA 233
           A+DLH   W FRHIYRGQP+RHLLTTGWS+FV+ K L +GD+VLF+R E  +L LGIRRA
Sbjct: 185 AKDLHGVEWRFRHIYRGQPRRHLLTTGWSVFVNHKGLMSGDAVLFLRGENGELRLGIRRA 244

Query: 234 NRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVH 293
            RQ + + SSVLSS SMH+G+LA+AA+A A  S F +FYNPRASP+EF++P  KY K+ +
Sbjct: 245 ARQQSVIPSSVLSSQSMHLGVLASAANAVATKSMFHIFYNPRASPAEFLIPYHKYVKSCN 304

Query: 294 SNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKR 353
              +S+GMRF+M FETE++  RRY G ITGI D+DP +W  S+WR+L VGWDE  A E++
Sbjct: 305 L-PLSIGMRFKMRFETEDTAERRYTGIITGIGDVDPAKWPGSKWRSLMVGWDEHAANEQQ 363

Query: 354 NRVSIWEIEPVTA 366
            RVS WEIEP  +
Sbjct: 364 ERVSPWEIEPCIS 376


>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
          Length = 737

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/376 (54%), Positives = 262/376 (69%), Gaps = 2/376 (0%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELWHACAGPLV++P  G  V YFPQGH+EQV  S  +  D  +PNY +LPSK+LC +
Sbjct: 42  LYTELWHACAGPLVSVPQMGDKVFYFPQGHTEQVEKSTNQGADQPMPNY-DLPSKILCRV 100

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A+ +TDEVYAQ+TL P P+ D   L +  +     +P    FCKTLTASDTSTH
Sbjct: 101 VNVWLKAEPDTDEVYAQLTLIPEPNQDETTLEKETVQSPPRRPHVYSFCKTLTASDTSTH 160

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR AE+  P LD S QPP QEL+A+DLH   W FRHI+RGQP+RHLLTTGWS F
Sbjct: 161 GGFSVLRRHAEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLTTGWSAF 220

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ +SV+SS SMH+G+LA A HA + 
Sbjct: 221 VSSKRLVAGDAFIFLRGENGELRVGVRRALRQQNNMPTSVISSHSMHLGVLATAMHAFST 280

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + F+VFY PR SPSEFV+P  +Y ++V  N  S+GMRFRM FE EE+  +R+ GTI G+
Sbjct: 281 GTMFSVFYRPRTSPSEFVIPYDQYMESV-KNNYSIGMRFRMRFEGEETPEQRFTGTIVGV 339

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQA 384
            D D  RW  S+WR L+V WDE ++ E+  RVS W+IEP  AP  I PPP  R+K PR  
Sbjct: 340 EDYDSNRWPASKWRCLKVQWDEQSSVERPLRVSPWKIEPSAAPTAINPPPIPRAKRPRTN 399

Query: 385 DDDASDLDNVFKRTMP 400
               SD+ ++ +  +P
Sbjct: 400 VPSPSDVSHLSREGLP 415


>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
          Length = 782

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/379 (52%), Positives = 264/379 (69%), Gaps = 9/379 (2%)

Query: 4   PANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           P + AG ASN       E+  +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  
Sbjct: 41  PESYAGFASN-------EEDFLYNELWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTN 93

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           +  D Q+P Y  LPSK+LC ++N+ L A+ +TDEV+AQMTL P  + D + ++       
Sbjct: 94  QVSDQQMPIY-KLPSKILCTVINIDLKAEPDTDEVFAQMTLVPESTQDEKDIIIETPPPL 152

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
            ++P    FCKTLTASDTSTHGGFSV RR A++  PPLD   QPP+QEL+A+DLH   W+
Sbjct: 153 QSRPHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWS 212

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SS
Sbjct: 213 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSS 272

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           V+SS SMH+G+LA A+HA    + FTV+Y PR SPSEF+VP A+Y +++  N  S+GMRF
Sbjct: 273 VISSHSMHLGVLATASHAIQTGTMFTVYYKPRTSPSEFIVPFAQYVESIKKN-YSIGMRF 331

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE EE+  +R+ GTI GI D+D  RW  S+WR L+V WDE T+  + +++S W+IEP
Sbjct: 332 KMRFEGEEAPEQRFTGTIIGIGDVDSTRWPESKWRCLKVRWDEQTSVPRPDKISPWQIEP 391

Query: 364 VTAPFFICPPPFFRSKHPR 382
             AP  + P P  R+K PR
Sbjct: 392 ALAPIALNPLPVSRTKRPR 410


>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
 gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
          Length = 781

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 214/353 (60%), Positives = 257/353 (72%), Gaps = 12/353 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD-IDGQIPNYPNLPSKLLCI 83
           +++E WHACAGPLV LP  G  VVYFPQGH EQV AS  ++  D QIP Y NLPS++ C 
Sbjct: 72  LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQY-NLPSQIFCR 130

Query: 84  LLNVTLHADTETDEVYAQMTLQP--------VPSYDREALLRSDLALKSNKPQTEFFCKT 135
           +LN++L A  ETDEVYAQMTL P        +     +  L  D    S+K +   FCK 
Sbjct: 131 VLNLSLGAYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTASSKAKLSMFCKN 190

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT+SDTSTHGGFSVPRRAAE+ FP LD+   PPAQE++A+DLH   W FRHIYRGQP+RH
Sbjct: 191 LTSSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRH 250

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIGI 254
           LLTTGWS+FVS K+L AGD+VLF+R +  +L +GIRRA R Q +  SSS+LSS SM IG+
Sbjct: 251 LLTTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGV 310

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LAAAAHA +  + FTVFYNPRASP+EFVVP  KY K+   N I +GMRF+M FETE+S  
Sbjct: 311 LAAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMN-ILIGMRFKMRFETEDSSE 369

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           RRYMGTITGI D+DP RW  S+WR L+VGWDE  A E++ RVS WEIEP  AP
Sbjct: 370 RRYMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAP 422


>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
          Length = 854

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/355 (55%), Positives = 253/355 (71%), Gaps = 2/355 (0%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P     V YFPQGH EQV AS  +  + Q+P Y +LPSKLLC ++NV
Sbjct: 61  ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRVINV 119

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L A+ +TDEVYAQ+TL P P+ D   + +        + Q   FCKTLTASDTSTHGGF
Sbjct: 120 DLKAEADTDEVYAQITLLPEPNQDENVIEKETPPPPPPRFQVHSFCKTLTASDTSTHGGF 179

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 180 SVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSS 239

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 240 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 299

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FTV+Y PR SPSEF+VP  +Y ++V +N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 300 FTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDS 358

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           DP RW  S+WR+L+V WDE+++  + +RVS W+IEP  AP  + P P  R K PR
Sbjct: 359 DPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALAPPALSPVPMPRPKRPR 413


>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
          Length = 851

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/355 (55%), Positives = 253/355 (71%), Gaps = 2/355 (0%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P     V YFPQGH EQV AS  +  + Q+P Y +LPSK+LC ++NV
Sbjct: 57  ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKILCRVINV 115

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L A+ +TDEVYAQ+TL P P  D  A+ +        + Q   FCKTLTASDTSTHGGF
Sbjct: 116 DLKAEADTDEVYAQITLLPEPVQDENAIEKESPPPPPPRFQVHSFCKTLTASDTSTHGGF 175

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV RR A++  PPLD S QPP QEL+A+DLH + W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 176 SVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFVSS 235

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 236 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 295

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FTV+Y PR SPSEF+VP  +Y ++V +N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 296 FTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDS 354

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           DP RW  S+WR+L+V WDE+T+  + +RVS W+IEP  +P  + P P  R K PR
Sbjct: 355 DPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPVPMPRPKRPR 409


>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 858

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/386 (52%), Positives = 261/386 (67%), Gaps = 7/386 (1%)

Query: 2   KTPANTAGAASNSGEGGGGEKKT-----INTELWHACAGPLVNLPAAGTHVVYFPQGHSE 56
           K   N  G  SNS      E+       +  ELWHACAGPLV +P     V YFPQGH E
Sbjct: 26  KETRNGEGQKSNSSRPAAAERAVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIE 85

Query: 57  QVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALL 116
           QV AS  +  + Q+P Y +LPSKLLC ++NV L A+ +TDEVYAQ+TL P  + D  A+ 
Sbjct: 86  QVEASTNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIE 144

Query: 117 RSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARD 176
           +        + Q   FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+D
Sbjct: 145 KEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKD 204

Query: 177 LHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ 236
           LH N W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ
Sbjct: 205 LHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQ 264

Query: 237 PANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQ 296
             N+ SSV+SS SMH+G+LA A HA +  + FTV+Y PR SPSEF+VP  +Y ++V +N 
Sbjct: 265 QGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN- 323

Query: 297 ISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRV 356
            S+GMRF+M FE EE+  +R+ GTI GI D D  RW  S+WR+L+V WDE+++  + +RV
Sbjct: 324 YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDITRWPKSKWRSLKVRWDETSSIPRPDRV 383

Query: 357 SIWEIEPVTAPFFICPPPFFRSKHPR 382
           S W+IEP  AP  + P P  R K PR
Sbjct: 384 SPWKIEPALAPPALSPVPMPRPKRPR 409


>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
 gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/358 (55%), Positives = 255/358 (71%), Gaps = 2/358 (0%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGPLV +P  G HV YFPQGH EQV AS  +  D Q+P Y +LP K+LC +
Sbjct: 50  LYNELWHACAGPLVTVPREGDHVFYFPQGHLEQVEASTNQVADQQMPLY-DLPPKILCRV 108

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A+ +TDEV+AQ+TL P+ + D  A  +        +     FCKTLTASDTSTH
Sbjct: 109 VNVQLKAEPDTDEVFAQVTLLPLHNQDENASEKEPPPPPPPRFHVHSFCKTLTASDTSTH 168

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR A++  PPLD S QPP QEL+A+DLH + W FRHI+RGQP+RHLL +GWS+F
Sbjct: 169 GGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFRHIFRGQPRRHLLQSGWSVF 228

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 229 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATAWHAVST 288

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + FTV+Y PR SP+EF+VP  +Y ++V SN  S+GMRF+M FE EE+  +R+ GTI GI
Sbjct: 289 GTMFTVYYKPRTSPAEFIVPFDQYMESVKSN-YSIGMRFKMRFEGEEAPEQRFTGTIVGI 347

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
            D DP RWK+S+WR L+V WDE++   + +RVS W+IEP  AP  + P P  R K PR
Sbjct: 348 EDADPSRWKDSKWRCLKVRWDETSTIPRPDRVSPWKIEPALAPPALNPLPMPRPKRPR 405


>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
          Length = 769

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/523 (42%), Positives = 314/523 (60%), Gaps = 48/523 (9%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +L +K+LC +
Sbjct: 10  LYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAY-DLRAKILCRV 68

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A+++TDEV+AQ+TL P P  D  +  + D+   + +P+   FCKTLTASDTSTH
Sbjct: 69  INVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTSTH 128

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWSLF
Sbjct: 129 GGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLF 188

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS K+L AGD+ +F+R E  +L +G+RRA RQ +N  SSV+SS SMH+G+LA A HA + 
Sbjct: 189 VSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVST 248

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + FTV+Y PR SP+EF++P  +Y +AV  N  S+GMRF+M FE EE+  +R+ GT+ G 
Sbjct: 249 GTIFTVYYKPRTSPAEFIIPFDQYMEAV-KNHYSIGMRFKMKFEGEEAPEQRFTGTVIGT 307

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQA 384
            D DP+RW  S+WR L+V WDE+++  +   VS W IE    P  + P P  RSK PR  
Sbjct: 308 EDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLNPLPVSRSKRPRAN 367

Query: 385 DDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAMQSSYMHSLP 444
              +S   +V  R                  GLS V  ++       + A+Q   + +L 
Sbjct: 368 MMSSSTESSVLTRE-----------------GLSKVT-IDHSPGSGFSRALQGQEISTLR 409

Query: 445 GSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQ-IDQLAKLPSTVNPLGSNILPQQPLGD 503
           G  ++N           N+L  T +S+ Q   Q +DQ+    +  + +  + +PQ     
Sbjct: 410 GIFMEN----------NNDLVTTQKSIVQPRSQVVDQMDSASTKRSFMSEDWVPQL---- 455

Query: 504 ISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSIQ 546
                RQ +   NL SG        PQ+++ +S +L  + +++
Sbjct: 456 -----RQGVQCANLISG--------PQSMMHSSTVLNMESNVK 485


>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
          Length = 848

 Score =  414 bits (1065), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/355 (55%), Positives = 252/355 (70%), Gaps = 2/355 (0%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P     V YFPQGH EQV AS  +  + Q+P Y +LPSK+LC ++NV
Sbjct: 56  ELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKILCRVINV 114

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L A+ +TDEVYAQ+TL P P  D  ++ +        + Q   FCKTLTASDTSTHGGF
Sbjct: 115 DLKAEADTDEVYAQITLLPEPVQDENSIEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGF 174

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV RR A++  PPLD S QPP QEL+A+DLH + W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 175 SVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPRRHLLQSGWSVFVSS 234

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 235 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTM 294

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FTV+Y PR SPSEF+VP  +Y ++V  N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 295 FTVYYKPRTSPSEFIVPFDQYTESVKIN-YSIGMRFKMRFEGEEAPEQRFTGTIVGIEDS 353

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           DP RW  S+WR+L+V WDE+T+  + +RVS W+IEP  +P  + P P  R K PR
Sbjct: 354 DPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPVPMPRPKRPR 408


>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
 gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
          Length = 774

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/350 (61%), Positives = 257/350 (73%), Gaps = 13/350 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI-DGQIPNYPNLPSKLLCI 83
           +++E WHACAGPLV LP  G  VVYFPQGH EQV AS  ++  D QIP Y NLPS++ C 
Sbjct: 72  LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQY-NLPSQIFCR 130

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREAL---LRSDLALKSNKPQTEFFCKTLTASD 140
           +LN++L A  ETDEVYAQMTL P    + E L   L  D    S+K +   F K LT+SD
Sbjct: 131 VLNLSLGAYRETDEVYAQMTLVP----ENEQLDQSLELDEPTASSKAKLSMFSKNLTSSD 186

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSVPRRAAE+ FP LD+   PPAQE++A+DLH   W FRHIYRGQP+RHLLTTG
Sbjct: 187 TSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTG 246

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIGILAAAA 259
           WS+FVS K+L AGD+VLF+R +  +L +GIRRA R Q +  SSS+LSS SM IG+LAAAA
Sbjct: 247 WSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLAAAA 306

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR--RY 317
           HA +  + FTVFYNPRASP+EFVVP  KY K+   N I +GMRF+M FETE+S  R  RY
Sbjct: 307 HAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMN-ILIGMRFKMRFETEDSSERSVRY 365

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           MGTITGI D+DP RW  S+WR L+VGWDE  A E++ RVS WEIEP  AP
Sbjct: 366 MGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAP 415


>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/523 (42%), Positives = 314/523 (60%), Gaps = 48/523 (9%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +L +K+LC +
Sbjct: 10  LYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAY-DLRAKILCRV 68

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A+++TDEV+AQ+TL P P  D  +  + D+   + +P+   FCKTLTASDTSTH
Sbjct: 69  INVHLKAESDTDEVFAQVTLLPEPKQDENSAEKEDVLTPTPRPRVHSFCKTLTASDTSTH 128

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWSLF
Sbjct: 129 GGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLF 188

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS K+L AGD+ +F+R E  +L +G+RRA RQ +N  SSV+SS SMH+G+LA A HA + 
Sbjct: 189 VSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGVLATAWHAVST 248

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + FTV+Y PR SP+EF++P  +Y +AV  N  S+GMRF+M FE EE+  +R+ GT+ G 
Sbjct: 249 GTIFTVYYKPRTSPAEFIIPFDQYMEAV-KNHYSIGMRFKMKFEGEEAPEQRFTGTVIGT 307

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQA 384
            D DP+RW  S+WR L+V WDE+++  +   VS W IE    P  + P P  RSK PR  
Sbjct: 308 EDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLNPLPVSRSKRPRAN 367

Query: 385 DDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQQNPSLANAMQSSYMHSLP 444
              +S   +V  R                  GLS V  ++       + A+Q   + +L 
Sbjct: 368 MMSSSTESSVLTRE-----------------GLSKVT-IDHSPGSGFSRALQGQEISTLR 409

Query: 445 GSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQ-IDQLAKLPSTVNPLGSNILPQQPLGD 503
           G  ++N           N+L  T +S+ Q   Q +DQ+    +  + +  + +PQ     
Sbjct: 410 GIFMEN----------NNDLVTTQKSIVQPRSQVVDQMDSASTKRSFMSEDWVPQL---- 455

Query: 504 ISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSIQ 546
                RQ +   NL SG        PQ+++ +S +L  + +++
Sbjct: 456 -----RQGVQCANLISG--------PQSMMHSSTVLNMESNVK 485


>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/378 (53%), Positives = 259/378 (68%), Gaps = 6/378 (1%)

Query: 9   GAASNSGEGG----GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKK 64
           G  SNS   G    G  +  + TELWHACAGPLV +P  G  V YFPQGH EQV AS  +
Sbjct: 25  GQNSNSTTSGVKRVGDPEMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQ 84

Query: 65  DIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS 124
             D Q+P Y +LPSK+LC ++NV L A+ +TDEV+AQ+TL P  + D  A+ +       
Sbjct: 85  VADQQMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPESNQDENAVEKEPPPPPP 143

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            +     FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL A+DLH N W F
Sbjct: 144 PRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRF 203

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV
Sbjct: 204 RHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSV 263

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
           +SS SMH+G+LA A HA +  + FTV+Y PR SPSEF+VP  +Y +++ +N  S+GMRF+
Sbjct: 264 ISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNN-YSIGMRFK 322

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           M FE EE+  +R+ GTI GI D DP RW++S+WR L+V WDE++   +  RVS W+IEP 
Sbjct: 323 MRFEGEEAPEQRFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSPWKIEPA 382

Query: 365 TAPFFICPPPFFRSKHPR 382
            AP  +   P  R K PR
Sbjct: 383 LAPPALNSLPMPRPKRPR 400


>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
          Length = 859

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/379 (53%), Positives = 260/379 (68%), Gaps = 7/379 (1%)

Query: 9   GAASNSGEGGGGEKK-----TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           G  SNS      E+       +  ELWHACAGPLV +P     V YFPQGH EQV AS  
Sbjct: 37  GQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTN 96

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           +  + Q+P Y +LPSKLLC ++NV L A+ +TDEVYAQ+TL P  + D  A+ +      
Sbjct: 97  QAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
             + Q   FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W 
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           V+SS SMH+G+LA A HA +  + FTV+Y PR SPSEF+VP  +Y ++V +N  S+GMRF
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRF 334

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE EE+  +R+ GTI GI + DP RW  S+WR+L+V WDE+++  + +RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394

Query: 364 VTAPFFICPPPFFRSKHPR 382
             AP  + P P  R K PR
Sbjct: 395 ALAPPALSPVPMPRPKRPR 413


>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
          Length = 859

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/379 (53%), Positives = 260/379 (68%), Gaps = 7/379 (1%)

Query: 9   GAASNSGEGGGGEKK-----TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           G  SNS      E+       +  ELWHACAGPLV +P     V YFPQGH EQV AS  
Sbjct: 37  GQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTN 96

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           +  + Q+P Y +LPSKLLC ++NV L A+ +TDEVYAQ+TL P  + D  A+ +      
Sbjct: 97  QAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
             + Q   FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W 
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           V+SS SMH+G+LA A HA +  + FTV+Y PR SPSEF+VP  +Y ++V +N  S+GMRF
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRF 334

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE EE+  +R+ GTI GI + DP RW  S+WR+L+V WDE+++  + +RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394

Query: 364 VTAPFFICPPPFFRSKHPR 382
             AP  + P P  R K PR
Sbjct: 395 ALAPPALSPVPMPRPKRPR 413


>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
 gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
           protein; Short=ARF1-BP; AltName: Full=Protein
           MEGAINTEGUMENTA
 gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
 gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
 gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
 gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
 gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 859

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/379 (53%), Positives = 260/379 (68%), Gaps = 7/379 (1%)

Query: 9   GAASNSGEGGGGEKK-----TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           G  SNS      E+       +  ELWHACAGPLV +P     V YFPQGH EQV AS  
Sbjct: 37  GQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTN 96

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           +  + Q+P Y +LPSKLLC ++NV L A+ +TDEVYAQ+TL P  + D  A+ +      
Sbjct: 97  QAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
             + Q   FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W 
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           V+SS SMH+G+LA A HA +  + FTV+Y PR SPSEF+VP  +Y ++V +N  S+GMRF
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRF 334

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE EE+  +R+ GTI GI + DP RW  S+WR+L+V WDE+++  + +RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394

Query: 364 VTAPFFICPPPFFRSKHPR 382
             AP  + P P  R K PR
Sbjct: 395 ALAPPALSPVPMPRPKRPR 413


>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
          Length = 912

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/377 (55%), Positives = 260/377 (68%), Gaps = 38/377 (10%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ-------------------------- 57
           +I +ELWHACAGPL++LP  G+ VVYFPQGH EQ                          
Sbjct: 28  SICSELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFGFDSPLKFTPPVAPVLE 87

Query: 58  --------VAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPS 109
                   VAAS+K+ +D Q P Y NLP ++LC +LNV LHAD E DEVYAQ+TL P   
Sbjct: 88  KTAVASMHVAASIKQGVDQQTPPY-NLPPQILCRVLNVNLHADQEMDEVYAQLTLVPESE 146

Query: 110 YDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPA 169
              + +     A  S  P    FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++ Q P+
Sbjct: 147 KSEKCMEEQVPASTSCTPH--MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPS 204

Query: 170 QELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLG 229
           QEL+A+DLH   W FRHI+RGQP+RHLLTTGWS+FVS KRL +GD+VLF+R E  +L LG
Sbjct: 205 QELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDAVLFLRGENGELRLG 264

Query: 230 IRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYY 289
           IRRA+RQ +  SSSVLSS SMH+G+L AAAHA A  S F +F+NPR SP+EFV+P  KY 
Sbjct: 265 IRRASRQQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNPRTSPAEFVIPYHKYV 324

Query: 290 KAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
           K+  ++ +++GMRF+M FETE++  RRY GTITGI D++P RW  S+WR+L+V WDE  A
Sbjct: 325 KSF-NHPLAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARWPGSKWRSLKVEWDEHAA 383

Query: 350 GEKRNRVSIWEIEPVTA 366
            E++ RVS WEIEP  +
Sbjct: 384 NERQERVSPWEIEPFIS 400


>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
 gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
          Length = 853

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/379 (53%), Positives = 260/379 (68%), Gaps = 7/379 (1%)

Query: 9   GAASNSGEGGGGEKK-----TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           G  SNS      E+       +  ELWHACAGPLV +P     V YFPQGH EQV AS  
Sbjct: 37  GQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTN 96

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           +  + Q+P Y +LPSKLLC ++NV L A+ +TDEVYAQ+TL P  + D  A+ +      
Sbjct: 97  QAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
             + Q   FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W 
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           V+SS SMH+G+LA A HA +  + FTV+Y PR SPSEF+VP  +Y ++V +N  S+GMRF
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRF 334

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE EE+  +R+ GTI GI + DP RW  S+WR+L+V WDE+++  + +RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394

Query: 364 VTAPFFICPPPFFRSKHPR 382
             AP  + P P  R K PR
Sbjct: 395 ALAPPALSPVPMPRPKRPR 413


>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
 gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/374 (54%), Positives = 260/374 (69%), Gaps = 3/374 (0%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G +S SG G   E   + TELWHACAGPLV +P     V YFPQGH EQV AS  +  D 
Sbjct: 42  GHSSVSGAGKDFET-ALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQ 100

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ 128
           Q+P Y +LPSK+LC ++NV L A+ +TDEV+AQ+TL P P+ D  A  +  L     +  
Sbjct: 101 QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFH 159

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH N W FRHI+
Sbjct: 160 VHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIF 219

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS 
Sbjct: 220 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 279

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A HA +  + FTV+Y PR SP+EF+VP  +Y ++V +N  S+GMRF+M FE
Sbjct: 280 SMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKNN-YSIGMRFKMRFE 338

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI GI D DP RW++S+WR L+V WDE++   + +RVS W+IEP   P 
Sbjct: 339 GEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVTPP 398

Query: 369 FICPPPFFRSKHPR 382
            + P P  R K PR
Sbjct: 399 ALNPLPVPRPKRPR 412


>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
 gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
          Length = 678

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/379 (53%), Positives = 260/379 (68%), Gaps = 7/379 (1%)

Query: 9   GAASNSGEGGGGEKK-----TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           G  SNS      E+       +  ELWHACAGPLV +P     V YFPQGH EQV AS  
Sbjct: 37  GQKSNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTN 96

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           +  + Q+P Y +LPSKLLC ++NV L A+ +TDEVYAQ+TL P  + D  A+ +      
Sbjct: 97  QAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPP 155

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
             + Q   FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W 
Sbjct: 156 PPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWR 215

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SS
Sbjct: 216 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSS 275

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           V+SS SMH+G+LA A HA +  + FTV+Y PR SPSEF+VP  +Y ++V +N  S+GMRF
Sbjct: 276 VISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNN-YSIGMRF 334

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE EE+  +R+ GTI GI + DP RW  S+WR+L+V WDE+++  + +RVS W++EP
Sbjct: 335 KMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEP 394

Query: 364 VTAPFFICPPPFFRSKHPR 382
             AP  + P P  R K PR
Sbjct: 395 ALAPPALSPVPMPRPKRPR 413


>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
          Length = 946

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/374 (54%), Positives = 259/374 (69%), Gaps = 3/374 (0%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G +S SG G   E   + TELWHACAGPLV +P     V YFPQGH EQV AS  +  D 
Sbjct: 42  GHSSVSGAGKDFET-ALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQ 100

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ 128
           Q+P Y +LPSK+LC ++NV L A+ +TDEV+AQ+TL P P+ D  A  +  L     +  
Sbjct: 101 QMPVY-DLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPPPPRFH 159

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH N W FRHI+
Sbjct: 160 VHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIF 219

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS 
Sbjct: 220 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSH 279

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A HA +  + FTV+Y PR SP+EF+VP  +Y ++V  N  S+GMRF+M FE
Sbjct: 280 SMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMESV-KNNYSIGMRFKMRFE 338

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI GI D DP RW++S+WR L+V WDE++   + +RVS W+IEP   P 
Sbjct: 339 GEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVTPP 398

Query: 369 FICPPPFFRSKHPR 382
            + P P  R K PR
Sbjct: 399 ALNPLPVPRPKRPR 412


>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
          Length = 840

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/358 (54%), Positives = 251/358 (70%), Gaps = 2/358 (0%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW+ACAGPLV++P     V YFPQGH EQV AS  +  D Q+P Y NLPSK+LC +
Sbjct: 41  LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCRV 99

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A+ ETDEV+AQ+TL P  + D  A+ +        +     FCKTLTASDTSTH
Sbjct: 100 INVHLKAEPETDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTH 159

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWS+F
Sbjct: 160 GGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 219

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 220 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIST 279

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + FTV+Y PR SPSEF+VP  +Y +++     ++GMRF+M FE EE+  +R+ GTI G 
Sbjct: 280 GTMFTVYYKPRTSPSEFIVPYDQYMESI-KKSYTIGMRFKMRFEGEEAPEQRFTGTIIGC 338

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
            D DP RWK+S+WR L+V WDE++   +  +VS W+IEP  AP  + P P  R K PR
Sbjct: 339 EDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPR 396


>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
          Length = 840

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/358 (55%), Positives = 249/358 (69%), Gaps = 3/358 (0%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +L SK+LC +
Sbjct: 34  LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIY-DLRSKILCRV 92

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A  +TDEV+AQ+TL P P+ D  A+ +        +     FCKTLTASDTSTH
Sbjct: 93  INVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTH 152

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR AE+  P LD S QPP Q+L+A+DLH N W FRHI+RGQP+RHLL +GWS+F
Sbjct: 153 GGFSVLRRHAEECLPELDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 212

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS KRL AGD+ +F+R EK +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 213 VSSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 271

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + FTV+Y PR SP+EF+VP  +Y ++V SN  S+GM F M FE EE+  +RY GTI GI
Sbjct: 272 GTMFTVYYKPRISPAEFIVPFDQYMESVKSN-YSIGMGFEMRFEGEEAPEQRYTGTIVGI 330

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
            D DP RW +S+WR L+V WDE++   +  RVS W+IEP  AP  + P P  R K PR
Sbjct: 331 EDADPQRWPDSKWRCLKVRWDETSTVPRPERVSPWKIEPALAPLALNPLPLSRPKRPR 388


>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
 gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
          Length = 846

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/373 (53%), Positives = 257/373 (68%), Gaps = 2/373 (0%)

Query: 12  SNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           S+SG G       + TELW +CAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P
Sbjct: 27  SSSGVGIVDADTALYTELWRSCAGPLVTVPREGELVYYFPQGHIEQVEASTNQVADQQMP 86

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
            Y NLPSK+LC ++NV L A+ +TDEVYAQ+TL P P+ D  A+ +  +     +     
Sbjct: 87  LY-NLPSKILCRVVNVLLKAEPDTDEVYAQVTLMPEPNQDENAVKKEPMRPPPPRFHVHS 145

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSV RR A++  P LD S QPP QEL+A+DLH N W FRHI+RGQ
Sbjct: 146 FCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQ 205

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N  SSV+SS SMH
Sbjct: 206 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNAPSSVISSHSMH 265

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +G+LA A HA    + FTV+Y PR SP+EF+VP   Y ++V +N  S+GMRF+M FE EE
Sbjct: 266 LGVLATAWHAIQTKTMFTVYYKPRTSPAEFIVPYDHYMESVKNN-YSIGMRFKMRFEGEE 324

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
           +  +R+ GTI GI D DP RW  S+WR L+V WDE+++  + +RVS W+IEP  +P  + 
Sbjct: 325 APEQRFTGTIVGIEDADPQRWLESKWRCLKVRWDENSSIPRPDRVSPWKIEPALSPPALN 384

Query: 372 PPPFFRSKHPRQA 384
            PP  R K PR +
Sbjct: 385 VPPVARPKRPRSS 397


>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
          Length = 839

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/358 (53%), Positives = 251/358 (70%), Gaps = 2/358 (0%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW+ACAGPLV++P     V YFPQGH EQV AS  +  D Q+P Y NLPSK+LC +
Sbjct: 41  LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCRV 99

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A+ +TDEV+AQ+TL P  + D  A+ +        +     FCKTLTASDTSTH
Sbjct: 100 INVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTH 159

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWS+F
Sbjct: 160 GGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 219

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 220 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIST 279

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + FTV+Y PR SPSEF+VP  +Y +++     ++GMRF+M FE EE+  +R+ GTI G 
Sbjct: 280 GTLFTVYYKPRTSPSEFIVPYDQYMESI-KKSYTIGMRFKMRFEGEEAPEQRFTGTIIGC 338

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
            D DP RWK+S+WR L+V WDE++   +  +VS W+IEP  AP  + P P  R K PR
Sbjct: 339 EDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPR 396


>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
          Length = 718

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 193/358 (53%), Positives = 251/358 (70%), Gaps = 2/358 (0%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW+ACAGPLV++P     V YFPQGH EQV AS  +  D Q+P Y NLPSK+LC +
Sbjct: 41  LYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVY-NLPSKILCRV 99

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A+ +TDEV+AQ+TL P  + D  A+ +        +     FCKTLTASDTSTH
Sbjct: 100 INVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTH 159

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWS+F
Sbjct: 160 GGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 219

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 220 VSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAIST 279

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + FTV+Y PR SPSEF+VP  +Y +++     ++GMRF+M FE EE+  +R+ GTI G 
Sbjct: 280 GTLFTVYYKPRTSPSEFIVPYDQYMESI-KKSYTIGMRFKMRFEGEEAPEQRFTGTIIGC 338

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
            D DP RWK+S+WR L+V WDE++   +  +VS W+IEP  AP  + P P  R K PR
Sbjct: 339 EDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPR 396


>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
 gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
          Length = 309

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/275 (78%), Positives = 237/275 (86%), Gaps = 3/275 (1%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G++  S   G GEKK IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAASM K++D 
Sbjct: 5   GSSGVSPAPGEGEKKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELD- 63

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ 128
            IP YP+LPSKL+C LL++TLHAD+ETDEVYAQMTLQPV  YDR+A+L S+L LK NK  
Sbjct: 64  NIPGYPSLPSKLICKLLSLTLHADSETDEVYAQMTLQPVNKYDRDAMLASELGLKQNKQP 123

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
            EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDF+MQPPAQEL+A+DLHD  W FRHIY
Sbjct: 124 AEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIY 183

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSS 247
           RGQPKRHLLTTGWS+FVS KRL AGDSVLFIRDEK QLLLGIRRA R QPA  SSSVLSS
Sbjct: 184 RGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPAL-SSSVLSS 242

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFV 282
           DSMHIGILAAAAHAAAN+SPFT+FYNPR   S  +
Sbjct: 243 DSMHIGILAAAAHAAANSSPFTIFYNPRYYSSYLI 277


>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
 gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
          Length = 834

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 241/476 (50%), Positives = 298/476 (62%), Gaps = 54/476 (11%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           EKK +N+ELWHACAGPLV LP   T VVYFPQGHSEQVAAS  K++DG IPNYPNLP +L
Sbjct: 17  EKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQL 76

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +C L +VT+HAD ETDEVYAQMTLQP+ P    +  L +++ + S +P T +FCKTLTAS
Sbjct: 77  ICQLHDVTMHADVETDEVYAQMTLQPLNPQEQNDPYLPAEMGIMSKQP-TNYFCKTLTAS 135

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFS----------------MQPPAQELMARDLHD-NIW 182
           DTSTHGGFSVPRRAAE++FPPL  +                 + P      ++L +   W
Sbjct: 136 DTSTHGGFSVPRRAAERVFPPLLHAGLFGLLLQITGGIVCRQRIPLSSRQRQELRNPGSW 195

Query: 183 TFRHIYRG----QPKRHLLT------------TGWSLFVSGKRLFAGDSVLFIRDEKQQL 226
             R + R     +P R + T            TGW   V G             +EK QL
Sbjct: 196 NGRALARKSRTEKPCRTIETGRCWIVGTAQRRTGWPCGVPGGPGLG--------NEKNQL 247

Query: 227 LLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLA 286
           LLGIRRA+R    + SSVLSSDSMHIG+LAAAAHAAA NS FT+F+NPRASPSEFV+PL+
Sbjct: 248 LLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLS 307

Query: 287 KYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDE 346
           KY KAV   +IS+GMRFRM+FETEES  RRYMGTIT +SD DPVRW +S WR+++VGWDE
Sbjct: 308 KYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDE 367

Query: 347 STAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSKHPRQADDDASDLDNVFKRTMPWIGDD 405
           STAGE+  RVS+WEIEP+T  F + P  F  R KHP  +   A   D+     + W+   
Sbjct: 368 STAGERPPRVSLWEIEPLTT-FPMYPSLFPLRVKHPWYSGVAALHDDS---NALMWLRGV 423

Query: 406 FGVKDSQSL----PGLSLVQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGGLSQ 457
            G    QSL    PG+    W   + +PSL +     Y   +  +     +G L Q
Sbjct: 424 AGEGGFQSLNFQSPGVG--SWGQQRLHPSLLSNDHDQYQAVVAAAAASQSDGYLKQ 477


>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
          Length = 888

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 214/425 (50%), Positives = 279/425 (65%), Gaps = 15/425 (3%)

Query: 14  SGEGGGGE-------KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI 66
           SGEG  G        +  +  ELWHACAGPLV +P     V YFPQGH EQV AS  +  
Sbjct: 68  SGEGQKGHSSRVVDAEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAA 127

Query: 67  DGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNK 126
           + Q+P Y +LPSK+LC ++NV L A+ ++DEVYAQ+TL P    D  A+ +        +
Sbjct: 128 EQQMPLY-DLPSKILCRVINVDLKAEVDSDEVYAQITLLPEAIQDENAIEKEAPPPPPPR 186

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
            Q   FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRH
Sbjct: 187 FQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRH 246

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+SSSV+S
Sbjct: 247 IFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVSSSVIS 306

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMH+G+LA A HA +  + F+V+Y PR SPSEF+VP  +Y ++V  N  S+GMRF+M 
Sbjct: 307 SHSMHLGVLATAWHAISTGTMFSVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMR 365

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE EE+  +R+ GTI GI D DP RW  S+WR+L+V WDE+++  + +RVS W++EP  A
Sbjct: 366 FEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKLEPALA 425

Query: 367 PFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQ 426
           P  + P P  R K PR     +S   +V  R     G   G KD     GLS V  +  Q
Sbjct: 426 PPALSPVPMPRPKRPRSNIAPSSPDSSVLIRE----GSAMGNKDPLPASGLSRV--LQGQ 479

Query: 427 QNPSL 431
           ++P+L
Sbjct: 480 EHPTL 484


>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score =  404 bits (1039), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/384 (51%), Positives = 257/384 (66%), Gaps = 12/384 (3%)

Query: 9   GAASNSGEGGGGEKKTINT----------ELWHACAGPLVNLPAAGTHVVYFPQGHSEQV 58
           G   N  +GG  E  + +T          ELWHACAGPLV +P     V YFPQGH EQV
Sbjct: 10  GNCLNHNDGGATEPHSPSTAKDAEAALFRELWHACAGPLVTVPRERERVFYFPQGHIEQV 69

Query: 59  AASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS 118
            AS  +  D  +P Y +LP K+LC ++NV L A+ +TDEV+AQ+TL P P+ D  A+ + 
Sbjct: 70  EASTNQVADQHMPVY-DLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKE 128

Query: 119 DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLH 178
                  +     FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH
Sbjct: 129 PPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLH 188

Query: 179 DNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA 238
            N W F+HI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  
Sbjct: 189 ANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 248

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS 298
           N+ SSV+SS SMH+G+LA A HA +  + FTV+Y PR SP+EF+VP  +Y +++  N  S
Sbjct: 249 NVPSSVISSHSMHLGVLATAWHAISTGTIFTVYYKPRTSPAEFIVPYDQYMESL-KNNYS 307

Query: 299 LGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSI 358
           +GMRF+M FE EE+  +R+ GTI GI D DP RW++S+WR L+V WDE++   +  RVS 
Sbjct: 308 IGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSP 367

Query: 359 WEIEPVTAPFFICPPPFFRSKHPR 382
           W+IEP  AP  + P    R K PR
Sbjct: 368 WKIEPALAPPALNPLSMPRPKRPR 391


>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 843

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 196/384 (51%), Positives = 256/384 (66%), Gaps = 12/384 (3%)

Query: 9   GAASNSGEGGGGEKKTINT----------ELWHACAGPLVNLPAAGTHVVYFPQGHSEQV 58
           G   N  +GG  E  + +T          ELWHACAGPLV +P     V YFPQGH EQV
Sbjct: 10  GNCLNHNDGGATEPHSPSTAKDAEAALFRELWHACAGPLVTVPREKERVFYFPQGHIEQV 69

Query: 59  AASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS 118
            AS  +  D  +P Y +LP K+LC ++NV L A+ +TDEV+AQ+TL P P+ D  A+ + 
Sbjct: 70  EASTNQVADQHMPVY-DLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDENAVEKE 128

Query: 119 DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLH 178
                  +     FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH
Sbjct: 129 PPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLH 188

Query: 179 DNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA 238
            N W F+HI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  
Sbjct: 189 ANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQG 248

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS 298
           N+ SSV+SS SMH+G+LA A HA    + FTV+Y PR SP+EF+VP  +Y +++  N  S
Sbjct: 249 NVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPAEFIVPYDQYMESL-KNSYS 307

Query: 299 LGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSI 358
           +GMRF+M FE EE+  +R+ GT+ GI D DP RW++S+WR L+V WDE++   +  RVS 
Sbjct: 308 IGMRFKMRFEGEEAPEQRFTGTVVGIEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSP 367

Query: 359 WEIEPVTAPFFICPPPFFRSKHPR 382
           W+IEP  AP  + P    R K PR
Sbjct: 368 WKIEPALAPPALNPLSMPRPKRPR 391


>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 821

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/372 (51%), Positives = 251/372 (67%), Gaps = 2/372 (0%)

Query: 11  ASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQI 70
            S+S   G   +  +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  +  +
Sbjct: 30  GSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHM 89

Query: 71  PNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE 130
           P Y +L  K+LC ++NV L A+ +TDEV+AQ+TL P P+ D  A+ +        +    
Sbjct: 90  PVY-DLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVH 148

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RG
Sbjct: 149 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRG 208

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SM
Sbjct: 209 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 268

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           H+G+LA A HA    + FTV+Y PR SP+EF+VP  +Y +++  N  ++GMRF+M FE E
Sbjct: 269 HLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGE 327

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI D D  RW  S+WR L+V WDE++   +  RVS W+IEP  AP  +
Sbjct: 328 EAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPAL 387

Query: 371 CPPPFFRSKHPR 382
            P P  R K PR
Sbjct: 388 NPLPMPRPKRPR 399


>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 715

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 193/372 (51%), Positives = 251/372 (67%), Gaps = 2/372 (0%)

Query: 11  ASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQI 70
            S+S   G   +  +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  +  +
Sbjct: 30  GSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHM 89

Query: 71  PNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE 130
           P Y +L  K+LC ++NV L A+ +TDEV+AQ+TL P P+ D  A+ +        +    
Sbjct: 90  PVY-DLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVH 148

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RG
Sbjct: 149 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRG 208

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SM
Sbjct: 209 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 268

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           H+G+LA A HA    + FTV+Y PR SP+EF+VP  +Y +++  N  ++GMRF+M FE E
Sbjct: 269 HLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGE 327

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI D D  RW  S+WR L+V WDE++   +  RVS W+IEP  AP  +
Sbjct: 328 EAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPAL 387

Query: 371 CPPPFFRSKHPR 382
            P P  R K PR
Sbjct: 388 NPLPMPRPKRPR 399


>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 766

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 193/372 (51%), Positives = 251/372 (67%), Gaps = 2/372 (0%)

Query: 11  ASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQI 70
            S+S   G   +  +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  +  +
Sbjct: 30  GSSSSSTGREAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHM 89

Query: 71  PNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE 130
           P Y +L  K+LC ++NV L A+ +TDEV+AQ+TL P P+ D  A+ +        +    
Sbjct: 90  PVY-DLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHVH 148

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RG
Sbjct: 149 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRG 208

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SM
Sbjct: 209 QPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSM 268

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           H+G+LA A HA    + FTV+Y PR SP+EF+VP  +Y +++  N  ++GMRF+M FE E
Sbjct: 269 HLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGE 327

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI D D  RW  S+WR L+V WDE++   +  RVS W+IEP  AP  +
Sbjct: 328 EAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPAL 387

Query: 371 CPPPFFRSKHPR 382
            P P  R K PR
Sbjct: 388 NPLPMPRPKRPR 399


>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 858

 Score =  400 bits (1029), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/393 (50%), Positives = 260/393 (66%), Gaps = 18/393 (4%)

Query: 6   NTAGAASN---SGEGGGGEKK-------------TINTELWHACAGPLVNLPAAGTHVVY 49
           N++G  +N   +G GGG  +               +  ELWHACAGPLV +P  G  V Y
Sbjct: 19  NSSGGYTNDVRNGSGGGEARNSSSSSSSARDAEAALYRELWHACAGPLVTVPREGERVFY 78

Query: 50  FPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPS 109
           FPQGH EQV AS  +  +  +P Y +LP K+LC ++NV L A+ +TDEV+AQ+TL P P+
Sbjct: 79  FPQGHIEQVEASTNQVAEQHMPVY-DLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEPN 137

Query: 110 YDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPA 169
            D  A+ +        +     FCKTLTASDTSTHGGFSV RR A++  PPLD + QPP 
Sbjct: 138 QDENAVEKEGPPAAPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTKQPPT 197

Query: 170 QELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLG 229
           QEL+A+DLH N W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G
Sbjct: 198 QELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVG 257

Query: 230 IRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYY 289
           +RRA RQ  N+ SSV+SS SMH+G+LA A HA    + FTV+Y PR SP+EF+VP  +Y 
Sbjct: 258 VRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYM 317

Query: 290 KAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
           +++  N  ++GMRF+M FE EE+  +R+ GTI GI D D  RW  S+WR+L+V WDE++ 
Sbjct: 318 ESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADTKRWPKSKWRSLKVRWDETSN 376

Query: 350 GEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
             +  RVS W+IEP  AP  + P P  R K PR
Sbjct: 377 IPRPERVSQWKIEPALAPPALNPLPMPRPKRPR 409


>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 851

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/355 (53%), Positives = 246/355 (69%), Gaps = 2/355 (0%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P     V YFPQGH EQV AS  +  +  +P Y +LP K+LC ++NV
Sbjct: 51  ELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVAEQHMPVY-DLPPKILCRVINV 109

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L A+ +TDEV+AQ+TL P P+ D  A+ +        +     FCKTLTASDTSTHGGF
Sbjct: 110 MLKAEPDTDEVFAQVTLLPEPNQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHGGF 169

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 170 SVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSS 229

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA    + 
Sbjct: 230 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTM 289

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FTV+Y PR SP+EF+VP  +Y +++  N  ++GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 290 FTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 348

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           D  RW  S+WR+L+V WDE++   +  RVS W+IEP  AP  + P P  R K PR
Sbjct: 349 DTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALAPLALNPLPMPRPKRPR 403


>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
 gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/335 (56%), Positives = 238/335 (71%), Gaps = 2/335 (0%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y  LP K+LC ++NV
Sbjct: 55  ELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLYNLLP-KILCRVVNV 113

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L A+ +TDEV+AQ+TL P  + D   L +        +     FCKTLTASDTSTHGGF
Sbjct: 114 QLKAEPDTDEVFAQVTLLPEHNQDESVLEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGF 173

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWS+FVS 
Sbjct: 174 SVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSS 233

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA +  + 
Sbjct: 234 KRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTL 293

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FTV+Y PR SP+EF+VP  +Y ++V  N  S+GMRF+M FE EE+  +R+ GTI GI D 
Sbjct: 294 FTVYYKPRTSPAEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDA 352

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           DP RWKNS+WR L+V WDE++   +  RVS W+IE
Sbjct: 353 DPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIE 387


>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
          Length = 803

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/357 (54%), Positives = 250/357 (70%), Gaps = 6/357 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQV ASM +  D Q+  Y +LPSKLLC +LNV
Sbjct: 19  ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRVLNV 77

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK--SNKPQTEFFCKTLTASDTSTHG 145
            L A+ +TDEVYAQ+ L P P  +  A+ ++         +P    FCKTLTASDTSTHG
Sbjct: 78  ELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTSTHG 137

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 138 GFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFV 197

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           S KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA    
Sbjct: 198 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTK 257

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R+ GTI G  
Sbjct: 258 SMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSVGMRFRMRFEGEEAPEQRFTGTIIGSE 316

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           +LDPV W  S WR+L+V WDE +   + +RVS W+IEP ++P  + P P  R K PR
Sbjct: 317 NLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSP-PVNPLPLSRVKRPR 371


>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
 gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
 gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
 gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
          Length = 808

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/357 (54%), Positives = 250/357 (70%), Gaps = 6/357 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQV ASM +  D Q+  Y +LPSKLLC +LNV
Sbjct: 24  ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRVLNV 82

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK--SNKPQTEFFCKTLTASDTSTHG 145
            L A+ +TDEVYAQ+ L P P  +  A+ ++         +P    FCKTLTASDTSTHG
Sbjct: 83  ELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTSTHG 142

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 143 GFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFV 202

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           S KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA    
Sbjct: 203 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTK 262

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R+ GTI G  
Sbjct: 263 SMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSVGMRFRMRFEGEEAPEQRFTGTIIGSE 321

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           +LDPV W  S WR+L+V WDE +   + +RVS W+IEP ++P  + P P  R K PR
Sbjct: 322 NLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSP-PVNPLPLSRVKRPR 376


>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
          Length = 791

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/357 (54%), Positives = 250/357 (70%), Gaps = 6/357 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQV ASM +  D Q+  Y +LPSKLLC +LNV
Sbjct: 7   ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRVLNV 65

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK--SNKPQTEFFCKTLTASDTSTHG 145
            L A+ +TDEVYAQ+ L P P  +  A+ ++         +P    FCKTLTASDTSTHG
Sbjct: 66  ELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTSTHG 125

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 126 GFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFV 185

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           S KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA    
Sbjct: 186 SSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTK 245

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R+ GTI G  
Sbjct: 246 SMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSVGMRFRMRFEGEEAPEQRFTGTIIGSE 304

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           +LDPV W  S WR+L+V WDE +   + +RVS W+IEP ++P  + P P  R K PR
Sbjct: 305 NLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSP-PVNPLPLSRVKRPR 359


>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
          Length = 645

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/369 (53%), Positives = 256/369 (69%), Gaps = 5/369 (1%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
           G   G     +  ELWHACAGPLVN+P     V YFPQGH EQ+ ASM + +D ++P++ 
Sbjct: 12  GSKLGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF- 70

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-EFFC 133
           NLPSK+LC ++NV L A+ ETDEVYAQ+TL P P  D+  +   D  L   +  T   FC
Sbjct: 71  NLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEP--DQSEITSPDPPLPEPQSCTVHSFC 128

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH N W FRHI+RGQP+
Sbjct: 129 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPR 188

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+  SV+SS SMH+G
Sbjct: 189 RHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLG 248

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LA A+HA    + F+VFY PRASPSEF+V + KY +A  ++++S+GMRF+M FE +E+ 
Sbjct: 249 VLATASHAITTGTLFSVFYKPRASPSEFIVSVNKYLEA-RNHKVSVGMRFKMRFEGDEAP 307

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP 373
            RR+ GTI G+ D     W +S+WR+L+V WDE ++  +  RVS WE+EP+     +   
Sbjct: 308 ERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQ 367

Query: 374 PFFRSKHPR 382
           P  RSK PR
Sbjct: 368 PMQRSKRPR 376


>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
          Length = 643

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/371 (53%), Positives = 258/371 (69%), Gaps = 9/371 (2%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
           G   G     +  ELWHACAGPLVN+P     V YFPQGH EQ+ ASM + +D ++P++ 
Sbjct: 10  GSKLGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF- 68

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT---EF 131
           NLPSK+LC ++NV L A+ ETDEVYAQ+TL P P  D+  +   D  L   +PQ+     
Sbjct: 69  NLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEP--DQSEITSPDPPLP--EPQSCTVHS 124

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH N W FRHI+RGQ
Sbjct: 125 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQ 184

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+  SV+SS SMH
Sbjct: 185 PRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMH 244

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +G+LA A+HA    + F+VFY PRASPSEF+V + KY +A  ++++S+GMRF+M FE +E
Sbjct: 245 LGVLATASHAITTGTLFSVFYKPRASPSEFIVSVNKYLEA-RNHKVSVGMRFKMRFEGDE 303

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
           +  RR+ GTI G+ D     W +S+WR+L+V WDE ++  +  RVS WE+EP+     + 
Sbjct: 304 APERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLT 363

Query: 372 PPPFFRSKHPR 382
             P  RSK PR
Sbjct: 364 AQPMQRSKRPR 374


>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
 gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
          Length = 671

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 192/349 (55%), Positives = 249/349 (71%), Gaps = 5/349 (1%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG    +  ELWHACAGPLVNLP  G  V YFPQGH EQ+ ASM + ++ Q+P++ +LPS
Sbjct: 9   GGCNDALYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEPQMPSF-DLPS 67

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           K+LC ++NV   A+ ETDEVYAQ+TL P P  D+  +   D  L +  +     FCKTLT
Sbjct: 68  KILCKVVNVQRKAEPETDEVYAQITLLPDP--DQSEVTSPDTPLPEPERCTVHSFCKTLT 125

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH N W FRHI+RGQP+RHLL
Sbjct: 126 ASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLL 185

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS SMH+G+LA 
Sbjct: 186 TTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLAT 245

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA A  + F+VFY PR S SEF+V + KY +A  S+++S+GMRF+M FE EE   RR+
Sbjct: 246 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEA-RSHKLSVGMRFKMRFEGEEVPERRF 304

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            GTI G+ D     W +S+WR+L+V WDE ++  + +RVS WE+EP+ A
Sbjct: 305 SGTIVGVGDNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVA 353


>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
 gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/365 (53%), Positives = 253/365 (69%), Gaps = 5/365 (1%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG    +  ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM + ++ Q+P++ NLPS
Sbjct: 12  GGCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQQMPSF-NLPS 70

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           K+LC ++NV   A+ ETDEVYAQ+TL P P  D+  +   D  L +  +     FCKTLT
Sbjct: 71  KILCKVVNVQRRAEPETDEVYAQITLLPEP--DQSEVTSPDPPLPEPERCTVHSFCKTLT 128

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH N W FRHI+RGQP+RHLL
Sbjct: 129 ASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLL 188

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS SMH+G+LA 
Sbjct: 189 TTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGVLAT 248

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA A  + F+VFY PR S SEF+V L KY +A  ++++S+GMRF+M FE EE   RR+
Sbjct: 249 ASHAIATGTLFSVFYKPRTSRSEFIVNLNKYIEA-QNHKLSVGMRFKMRFEGEEVPERRF 307

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            GTI G+ D     W +S+WR+L+V WDE ++  +  RVS W++EP+ A       P  R
Sbjct: 308 SGTIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVATTPSNSQPMQR 367

Query: 378 SKHPR 382
           +K PR
Sbjct: 368 NKRPR 372


>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
          Length = 665

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/379 (51%), Positives = 262/379 (69%), Gaps = 12/379 (3%)

Query: 10  AASN--SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           AASN   G+ GG     +  ELWHACAGPLV LP  G  V YFP+GH EQ+ ASM + ++
Sbjct: 2   AASNHPCGKPGGALSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NK 126
            Q+P++ NLPSK+LC ++N+   A+ ETDEVYAQ+TL  +P  D+   +  D  ++   K
Sbjct: 62  QQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITL--LPEADQSEPMSPDAPVQEPEK 118

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
                FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH+N W FRH
Sbjct: 119 CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRH 178

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR  RQ  N+ SSV+S
Sbjct: 179 IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVIS 238

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMHIG+LA AAHA    + F+VFY PR S SEF+V + +Y +A  + ++++GMRF+M 
Sbjct: 239 SHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KNQKLAVGMRFKMR 297

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE EE+  +R+ GTI G+ +     W +S+WR+L+V WDE ++  +  RVS WE+EP+ A
Sbjct: 298 FEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 357

Query: 367 ---PFFICPPPFFRSKHPR 382
              P    PP   R+K PR
Sbjct: 358 NNTPSAHLPPQ--RNKRPR 374


>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
          Length = 814

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/357 (54%), Positives = 250/357 (70%), Gaps = 6/357 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQV ASM +  D Q+  Y +LPSKLLC ++NV
Sbjct: 22  ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLY-DLPSKLLCSVINV 80

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRS--DLALKSNKPQTEFFCKTLTASDTSTHG 145
            L A+ +TDEVYAQ+ L P    +  A+ +S    A    KP    FCKTLTASDTSTHG
Sbjct: 81  ELKAEADTDEVYAQVMLIPENDQNEMAVEKSSSKAATTLAKPAVRSFCKTLTASDTSTHG 140

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 141 GFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFV 200

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           S KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA    
Sbjct: 201 SSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTK 260

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           S FTV+Y PR SPSEF++P  +Y ++V +N  S+G+RFRM FE EE+  +R+ GTI G  
Sbjct: 261 SMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGVRFRMRFEGEEAPEQRFTGTIIGSE 319

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           +LDP+ W  S WR+L+V WDE +   + +RVS W+IEP ++P  + P P  R K PR
Sbjct: 320 NLDPL-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSP-PVNPLPLSRVKRPR 374


>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/349 (54%), Positives = 251/349 (71%), Gaps = 5/349 (1%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G     +  ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM + ++ Q+P++ NLPS
Sbjct: 7   GATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPS 65

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           K+LC ++NV L A+ ETDEVYAQ+TL  +P  D+  +   D  L +S +     FCKTLT
Sbjct: 66  KILCKVVNVHLRAEPETDEVYAQITL--LPEADQSEVTSPDDPLPESPRCTVHSFCKTLT 123

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV RR A+   PPLD + QPP QEL+A DLH N W FRHI+RGQP+RHLL
Sbjct: 124 ASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLL 183

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ +N+ SSV+SS SMH+G+LA 
Sbjct: 184 TTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVISSHSMHLGVLAT 243

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA A  + F+VFY PR S SEF+V + KY +A  S+++S+GMRF+M FE +E   RR+
Sbjct: 244 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEA-QSHKLSVGMRFKMRFEGDEVPERRF 302

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            GTI G+ D   + W +S+WR+L+V WDE ++  + +RVS WE+EP+ +
Sbjct: 303 SGTIVGVEDNKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 351


>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 665

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/365 (53%), Positives = 256/365 (70%), Gaps = 5/365 (1%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G     +  ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM + ++ Q+P++ NLPS
Sbjct: 7   GATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPS 65

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           K+LC ++NV L A+ ETDEVYAQ+TL  +P  D+  +   D  L +S +     FCKTLT
Sbjct: 66  KILCKVVNVHLRAEPETDEVYAQITL--LPEADQSEVTSPDDPLPESPRCTVHSFCKTLT 123

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV RR A+   PPLD + QPP QEL+A DLH N W FRHI+RGQP+RHLL
Sbjct: 124 ASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLL 183

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ +N+ SSV+SS SMH+G+LA 
Sbjct: 184 TTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLAT 243

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA A  + F+VFY PR S SEF+V + KY +A  S+++S+GMRF+M FE +E   RR+
Sbjct: 244 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEA-RSHKLSVGMRFKMRFEGDEVPERRF 302

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            GTI G+ D     W +S+WR+L+V WDE ++  + +RVS WE+EP+ +     P P  R
Sbjct: 303 SGTIVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPTNPQPSQR 362

Query: 378 SKHPR 382
           +K  R
Sbjct: 363 NKRSR 367


>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
 gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/364 (54%), Positives = 251/364 (68%), Gaps = 9/364 (2%)

Query: 8   AGAASNSGEGG----GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           A AA N   GG    GG    +  ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM 
Sbjct: 2   AFAAMNHTSGGNPHAGGCNDALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMH 61

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL- 122
           + ++ Q+P + NLPSK+LC ++NV   A+ ETDEVYAQ+TL P P  D+  +   D  L 
Sbjct: 62  QGMEPQMPLF-NLPSKILCKVVNVQRRAEPETDEVYAQITLLPEP--DQSEVTSPDPPLP 118

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
           +  +     FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH N W
Sbjct: 119 EPERCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEW 178

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS 242
            FRHI+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ  N+ S
Sbjct: 179 HFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPS 238

Query: 243 SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMR 302
           SV+SS SMH+G+LA A+HA A  + F+VFY PR S SEF+V L KY + V ++++S+GMR
Sbjct: 239 SVISSQSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLE-VRNHKLSVGMR 297

Query: 303 FRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           F+M FE EE   RR+ GTI G+ D     W +S WR+L+V WDE ++  +  RVS WE+E
Sbjct: 298 FKMRFEGEEVPERRFSGTIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELE 357

Query: 363 PVTA 366
           P+ A
Sbjct: 358 PLVA 361


>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
          Length = 674

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/377 (52%), Positives = 260/377 (68%), Gaps = 9/377 (2%)

Query: 11  ASNSGEGG---GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           AS    GG   G     +  ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM + ++
Sbjct: 2   ASTLKSGGIHTGAINDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLE 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNK 126
            Q+P++ NLPSK+LC ++NV L A+ ETDEVYAQ+TL  +P  D+  +   D  L +S +
Sbjct: 62  QQMPSF-NLPSKILCKVVNVHLRAEPETDEVYAQITL--LPEADQSEVTSPDDPLPESPR 118

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
            +   FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH N W FRH
Sbjct: 119 VKIHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRH 178

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQPKRHLLTTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ +N+ SSV+S
Sbjct: 179 IFRGQPKRHLLTTGWSVFVSSKKLAAGDAFIFLRGENGELRVGVRRVMRQQSNVPSSVIS 238

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMH+G+LA A+HA A  + F+VFY PR S SEF+V + KY + V S+++S+GMRF+M 
Sbjct: 239 SHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLE-VQSHKLSVGMRFKMR 297

Query: 307 FETEESGTRRYMGTITGISD-LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           FE +E   RR+ GTI G+ D      W +S+WR+L+V WDE ++  + +RVS WE+EP+ 
Sbjct: 298 FEGDEIPERRFSGTIVGVGDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLV 357

Query: 366 APFFICPPPFFRSKHPR 382
           +       P  R+K  R
Sbjct: 358 STTLANSQPTQRNKRAR 374


>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 665

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/360 (52%), Positives = 252/360 (70%), Gaps = 5/360 (1%)

Query: 8   AGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           A    +S + GG     + TELWHACAGPLV LP  G  V YFP+GH EQ+ ASM + ++
Sbjct: 2   AATTHSSVKPGGVLSDALCTELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NK 126
            Q+P++ NLPSK+LC ++N+   A+ ETDEVYAQ+TL  +P  D+      D  ++   K
Sbjct: 62  QQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITL--LPELDQNEPTSPDAPVQEPEK 118

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
                FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH+N W FRH
Sbjct: 119 CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRH 178

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR  RQ  N+ SSV+S
Sbjct: 179 IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVIS 238

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMHIG+LA AAHA    + F+VFY PR S SEF+V + +Y +A  + ++S+GMRF+M 
Sbjct: 239 SHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMR 297

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE EE+  +R+ GTI G+ +     W +S+WR+L+V WDE ++  +  RVS WE+EP+ A
Sbjct: 298 FEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 357


>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
 gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
 gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
 gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 665

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/360 (53%), Positives = 254/360 (70%), Gaps = 7/360 (1%)

Query: 10  AASN--SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           AASN  SG+ GG     +  ELWHACAGPLV LP  G  V YFP+GH EQ+ ASM + ++
Sbjct: 2   AASNHSSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NK 126
            Q+P++ NLPSK+LC ++N+   A+ ETDEVYAQ+TL  +P  D+      D  ++   K
Sbjct: 62  QQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITL--LPELDQSEPTSPDAPVQEPEK 118

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
                FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH++ W FRH
Sbjct: 119 CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRH 178

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR  RQ  N+ SSV+S
Sbjct: 179 IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVIS 238

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMHIG+LA AAHA    + F+VFY PR S SEF+V + +Y +A  + ++S+GMRF+M 
Sbjct: 239 SHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMR 297

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE EE+  +R+ GTI G+ +     W +S+WR+L+V WDE ++  +  RVS WE+EP+ A
Sbjct: 298 FEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 357


>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 660

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 191/360 (53%), Positives = 254/360 (70%), Gaps = 7/360 (1%)

Query: 10  AASN--SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           AASN  SG+ GG     +  ELWHACAGPLV LP  G  V YFP+GH EQ+ ASM + ++
Sbjct: 2   AASNHSSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NK 126
            Q+P++ NLPSK+LC ++N+   A+ ETDEVYAQ+TL  +P  D+      D  ++   K
Sbjct: 62  QQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITL--LPELDQSEPTSPDAPVQEPEK 118

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
                FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH++ W FRH
Sbjct: 119 CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRH 178

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR  RQ  N+ SSV+S
Sbjct: 179 IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVIS 238

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMHIG+LA AAHA    + F+VFY PR S SEF+V + +Y +A  + ++S+GMRF+M 
Sbjct: 239 SHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMR 297

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE EE+  +R+ GTI G+ +     W +S+WR+L+V WDE ++  +  RVS WE+EP+ A
Sbjct: 298 FEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 357


>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
 gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 662

 Score =  391 bits (1004), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/360 (53%), Positives = 254/360 (70%), Gaps = 7/360 (1%)

Query: 10  AASN--SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           AASN  SG+ GG     +  ELWHACAGPLV LP  G  V YFP+GH EQ+ ASM + ++
Sbjct: 2   AASNHSSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NK 126
            Q+P++ NLPSK+LC ++N+   A+ ETDEVYAQ+TL  +P  D+      D  ++   K
Sbjct: 62  QQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITL--LPELDQSEPTSPDAPVQEPEK 118

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
                FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH++ W FRH
Sbjct: 119 CTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRH 178

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR  RQ  N+ SSV+S
Sbjct: 179 IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVIS 238

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMHIG+LA AAHA    + F+VFY PR S SEF+V + +Y +A  + ++S+GMRF+M 
Sbjct: 239 SHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMR 297

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE EE+  +R+ GTI G+ +     W +S+WR+L+V WDE ++  +  RVS WE+EP+ A
Sbjct: 298 FEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 357


>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
 gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
          Length = 704

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 202/375 (53%), Positives = 255/375 (68%), Gaps = 11/375 (2%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A SNSG+        +  ELW ACAGPLV +P  G  V YFPQGH EQV ASM +    Q
Sbjct: 13  APSNSGD-------PLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQ 65

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPS-YDREALLRSDLALKSNKPQ 128
           +  Y +LPSKLLC +LNV L A+T+TDEVYAQ+ L P P   D  A   S  +  S +P 
Sbjct: 66  MRLY-DLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQTDVAAEKASSASAASPRPA 124

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+
Sbjct: 125 VRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIF 184

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS 
Sbjct: 185 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQ 244

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A HA    S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE
Sbjct: 245 SMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFE 303

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI G  +LDP+ W +S WR L+V WDE +   + +RVS W+IEP ++P 
Sbjct: 304 GEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPP 362

Query: 369 FICPPPFFRSKHPRQ 383
               P   R K PRQ
Sbjct: 363 VNPLPLSSRVKRPRQ 377


>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
          Length = 801

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/375 (53%), Positives = 254/375 (67%), Gaps = 12/375 (3%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A SNSG+        +  ELW ACAGPLV +P  G  V YFPQGH EQV ASM + + G 
Sbjct: 7   APSNSGD-------PLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQ-VAGN 58

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSY-DREALLRSDLALKSNKPQ 128
                +LPSKLLC +LNV L A+T+TDEVYAQ+ L P P   D  A   S  +    +P 
Sbjct: 59  PMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPA 118

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH   W FRHI+
Sbjct: 119 VRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIF 178

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS 
Sbjct: 179 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQ 238

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A HA    S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE
Sbjct: 239 SMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFE 297

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI G  +LDP+ W +S WR L+V WDE +   + ++VS W+IEP ++P 
Sbjct: 298 GEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSP- 355

Query: 369 FICPPPFFRSKHPRQ 383
            + P P  R K PRQ
Sbjct: 356 PVNPLPLSRGKRPRQ 370


>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
 gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 806

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/375 (53%), Positives = 254/375 (67%), Gaps = 12/375 (3%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A SNSG+        +  ELW ACAGPLV +P  G  V YFPQGH EQV ASM + + G 
Sbjct: 12  APSNSGD-------PLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQ-VAGN 63

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSY-DREALLRSDLALKSNKPQ 128
                +LPSKLLC +LNV L A+T+TDEVYAQ+ L P P   D  A   S  +    +P 
Sbjct: 64  PMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPA 123

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH   W FRHI+
Sbjct: 124 VRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIF 183

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS 
Sbjct: 184 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQ 243

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A HA    S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE
Sbjct: 244 SMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFE 302

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI G  +LDP+ W +S WR L+V WDE +   + ++VS W+IEP ++P 
Sbjct: 303 GEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSP- 360

Query: 369 FICPPPFFRSKHPRQ 383
            + P P  R K PRQ
Sbjct: 361 PVNPLPLSRGKRPRQ 375


>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
 gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 812

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/375 (53%), Positives = 254/375 (67%), Gaps = 12/375 (3%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A SNSG+        +  ELW ACAGPLV +P  G  V YFPQGH EQV ASM + + G 
Sbjct: 12  APSNSGD-------PLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQ-VAGN 63

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSY-DREALLRSDLALKSNKPQ 128
                +LPSKLLC +LNV L A+T+TDEVYAQ+ L P P   D  A   S  +    +P 
Sbjct: 64  PMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPA 123

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH   W FRHI+
Sbjct: 124 VRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIF 183

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS 
Sbjct: 184 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQ 243

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A HA    S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE
Sbjct: 244 SMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFE 302

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI G  +LDP+ W +S WR L+V WDE +   + ++VS W+IEP ++P 
Sbjct: 303 GEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSP- 360

Query: 369 FICPPPFFRSKHPRQ 383
            + P P  R K PRQ
Sbjct: 361 PVNPLPLSRGKRPRQ 375


>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
 gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
          Length = 654

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/361 (52%), Positives = 254/361 (70%), Gaps = 8/361 (2%)

Query: 10  AASNSGEG---GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI 66
           AA++ G G   G      +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +
Sbjct: 5   AANHFGGGTHPGASANNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGV 64

Query: 67  DGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSN 125
           D  +P++ NLP+K+LC ++NV L A++ETDEVYAQ+TL P P  D+  +   D  L +  
Sbjct: 65  DQHLPSF-NLPAKILCKVMNVQLRAESETDEVYAQITLLPEP--DQGEITSPDPPLPEPE 121

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
           K     FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A DLH N W FR
Sbjct: 122 KCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHFR 181

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL 245
           HI+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R +  +L +G+RR  RQ  N+ SSV+
Sbjct: 182 HIFRGQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSVI 241

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
           SS SMH+G+LA A+HA    + F+VFY PR S SEF+V + KY +A  ++++S+GMRF+M
Sbjct: 242 SSHSMHLGVLATASHAIMTGTLFSVFYKPRTSQSEFIVSVNKYLEA-RNHKLSVGMRFKM 300

Query: 306 MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            FE EE   RR+ GTI G+ D    RW +S+WR+L+V WDE ++  + +RVS W++EP+ 
Sbjct: 301 RFEGEEVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLV 360

Query: 366 A 366
           A
Sbjct: 361 A 361


>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
          Length = 816

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 243/475 (51%), Positives = 296/475 (62%), Gaps = 43/475 (9%)

Query: 89  LHADTETDEVYAQMTLQPVPSYD-REALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
           +HAD ETDEVYAQMTLQP+ + + +EA L ++L   S +P T +FCKTLTASDTSTHGGF
Sbjct: 1   MHADAETDEVYAQMTLQPLSAQELKEAYLPAELGTPSRQP-TNYFCKTLTASDTSTHGGF 59

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SVPRRAAEK+FPPLDFSMQPPAQEL+ARDLHDN W FRHI+RGQPKRHLLTTGWS+FVS 
Sbjct: 60  SVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSA 119

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGD+VLFI +EK QLLLGIRRA+R    + SSVLSSDSMH+G+LAAAAHAAA  S 
Sbjct: 120 KRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATISR 179

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FT+F+NPRASPSEFV+PLAKY KAV+  ++S+GMRFRM+FETE             +   
Sbjct: 180 FTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETENQVFVATWAQSLALVTW 239

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSKHPRQA-- 384
            PVRW+NS WR+++VGWDESTAGE++ +VS+WEIEP+T  F + P PF  R K P     
Sbjct: 240 IPVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPLTT-FPMYPSPFPLRLKRPWPTGL 298

Query: 385 -DDDASDLDNVFKRTMPWIGDDFGVKDSQSL--PGLSLVQWMNMQQNPSLANAMQSSYMH 441
                 D D        W+  D   +  Q L   G  +  WM  + +PS+   MQS    
Sbjct: 299 PSFGIKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVSPWMQPRLDPSMM-GMQSDMYQ 357

Query: 442 SLPGSILQNLNGGLSQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGSNILPQQPL 501
            +  + LQ +            + Y+  S P  V Q  Q   LP   + L       QP 
Sbjct: 358 VMATAALQEMRA----------IDYSKIS-PASVLQFQQPQSLPCQSSTL------MQP- 399

Query: 502 GDISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSIQNPQLPANLPQ 556
                     M+ Q   S P QA +   Q   Q S   Q Q   Q+  L   LPQ
Sbjct: 400 ---------QMLHQ---SQPQQAFLQSVQENQQHS---QPQSQTQSHHLQPQLPQ 439


>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
          Length = 728

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/375 (53%), Positives = 254/375 (67%), Gaps = 12/375 (3%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A SNSG+        +  ELW ACAGPLV +P  G  V YFPQGH EQV ASM + + G 
Sbjct: 12  APSNSGD-------PLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQ-VAGN 63

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSY-DREALLRSDLALKSNKPQ 128
                +LPSKLLC +LNV L A+T+TDEVYAQ+ L P P   D  A   S  +    +P 
Sbjct: 64  PMRLYDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKTSSGSAAPPRPA 123

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A+DLH   W FRHI+
Sbjct: 124 VRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIF 183

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS 
Sbjct: 184 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQ 243

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A HA    S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE
Sbjct: 244 SMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFE 302

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI G  +LDP+ W +S WR L+V WDE +   + ++VS W+IEP ++P 
Sbjct: 303 GEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSP- 360

Query: 369 FICPPPFFRSKHPRQ 383
            + P P  R K PRQ
Sbjct: 361 PVNPLPLSRGKRPRQ 375


>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
          Length = 684

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/371 (51%), Positives = 252/371 (67%), Gaps = 3/371 (0%)

Query: 12  SNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           S+   G    K  +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  +  D Q+P
Sbjct: 9   SSGALGSVAYKDALYQELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQQMP 68

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
            + +LP+K+LC +++V L A+ ETDEVYAQ+TL P P    E         +  +     
Sbjct: 69  LF-SLPAKILCRVVHVQLRAEPETDEVYAQITLLPEPEQG-EITSPDPPIPEPPRCTVHS 126

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSV RR A++  P LD S  PP QEL+A DLH N W FRHI+RGQ
Sbjct: 127 FCKTLTASDTSTHGGFSVLRRHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQ 186

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQP+N+ SSV+SS SMH
Sbjct: 187 PRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQPSNMPSSVISSHSMH 246

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +G+LA A+HA +  + F+VFY PR S SEF++ L KY +A  ++++S+GMRF+M FE E+
Sbjct: 247 LGVLATASHAISTGTLFSVFYKPRTSQSEFIISLNKYLEA-KNHKLSVGMRFKMRFEGED 305

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
           +  RR+ GTI G+ D    RW +S+WR+L+V WDE ++  +  RVS WE+EP+ A     
Sbjct: 306 APERRFSGTIIGVGDAVSSRWADSEWRSLKVQWDEPSSIPRPVRVSPWELEPLVAAVPSA 365

Query: 372 PPPFFRSKHPR 382
           P P  RSK  R
Sbjct: 366 PQPTPRSKRAR 376


>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
          Length = 813

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 191/368 (51%), Positives = 247/368 (67%), Gaps = 7/368 (1%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E   +  ELW ACAGPLV++PA G  V YFPQGH EQV AS  +  + Q     NLP K+
Sbjct: 16  ELDELYAELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKI 75

Query: 81  LCILLNVTLHADTETDEVYAQMTLQP------VPSYDREALLRSDLALKSNKPQTEFFCK 134
            C ++NV L A+ +TDEVYAQ+TL P        +   +  + + +     +P+   FCK
Sbjct: 76  PCKVMNVELKAEQDTDEVYAQLTLLPEKQNEHASTEGEKEEVPAAVPAVHERPRVHSFCK 135

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSV RR A++  PPLD S  PP QELM RDLH   W FRHI+RGQPKR
Sbjct: 136 TLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKR 195

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLL +GWS+FVS KRL A D+ +F+R E  +L +G+RRA RQ AN+ SSV+SS SMH+G+
Sbjct: 196 HLLQSGWSVFVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGV 255

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LA A HA    S FTV+Y PR SP+EFVVP   YY+++  N  S+GMRF+M FE EE+  
Sbjct: 256 LATAWHAVNTGSMFTVYYKPRTSPAEFVVPCDLYYESMKRNH-SIGMRFKMRFEGEEAAE 314

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           +R+ GTI GI D DP  W +S+WR+L+V WDE+++  + +RVS W+IEP  +P  + P  
Sbjct: 315 QRFTGTIVGIGDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVSPLSVNPLQ 374

Query: 375 FFRSKHPR 382
             R+K  R
Sbjct: 375 APRNKRSR 382


>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 801

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/357 (53%), Positives = 248/357 (69%), Gaps = 6/357 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQV ASM +    Q+  Y +LP KLLC ++NV
Sbjct: 21  ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRVINV 79

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN--KPQTEFFCKTLTASDTSTHG 145
            L A+ +TDEVYAQ+ L P P  +  A+ +S     +   +P    FCKTLTASDTSTHG
Sbjct: 80  ELKAEADTDEVYAQVMLMPEPEQNEMAVDKSTSTTGATPPRPAVRSFCKTLTASDTSTHG 139

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 140 GFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWSVFV 199

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           S KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA    
Sbjct: 200 SSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTK 259

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R+ GTI G  
Sbjct: 260 SMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFEGEEAPEQRFTGTIVGSE 318

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           +LD + W  S WR+L+V WDE +   + +RVS W+IEP ++P  + P P  R K PR
Sbjct: 319 NLDQL-WPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSP-PVNPLPLSRVKRPR 373


>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
          Length = 709

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/361 (54%), Positives = 251/361 (69%), Gaps = 17/361 (4%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV--AASMKKDIDG---QIPNYPNLPSK 79
           I  ELWHACAGPL+ LP  G  VVYFPQGH EQV  A+S  K ++    ++  Y +LP +
Sbjct: 47  ICLELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTY-DLPPQ 105

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN-------KPQTEFF 132
           + C +L+V LHAD E D+VYAQ+TL  +P  +   +   +L            K     F
Sbjct: 106 IFCRVLDVKLHADQENDDVYAQVTL--LPELESNEVCGKNLEEDEESGSEILCKTIPHMF 163

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
           CKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP
Sbjct: 164 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQP 223

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
           +RHLLTTGWS+FV+ K L +GD+VLF+R E  +L LGIRRA+R P+++  SVLSS  +H+
Sbjct: 224 RRHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLHL 283

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
            IL+ AA+A +  S F VFY+PRASPSEFV+P  KY K++ S  IS+GMRF+M  E E+S
Sbjct: 284 SILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSL-SRPISIGMRFKMRLEMEDS 342

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP-VTAPFFIC 371
             +R  G ITG  D+DP+RW NS+WR L V WD+S+   ++ RVS WEIEP ++ P   C
Sbjct: 343 AEKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSC 402

Query: 372 P 372
           P
Sbjct: 403 P 403


>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
 gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
          Length = 787

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/377 (52%), Positives = 259/377 (68%), Gaps = 9/377 (2%)

Query: 6   NTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           N  G A +  + G    K    ELWHACAGPLV +P  G  V YFPQGH EQV AS  + 
Sbjct: 4   NGNGIAVSGKDSGDALYK----ELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQA 59

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN 125
            D Q+P Y +LP K+LC ++NV L A+ +TDEV+AQ+TL P    D E L+         
Sbjct: 60  ADEQMPAY-DLPGKILCRVVNVQLKAEPDTDEVFAQITLLPQSEQD-ENLVEKKALPAPT 117

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
           +P+   FCKTLTASDTSTHGGFSV RR A++  PPLD S+QPPAQEL+A+DL  N W FR
Sbjct: 118 RPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRFR 177

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL 245
           HI+RGQP+RHLL +GWSLFVS K+L AGD+ +F+R E  +L +G+RRA RQ  N+ SS +
Sbjct: 178 HIFRGQPRRHLLQSGWSLFVSAKKLVAGDAFIFLRGETGELRVGVRRAMRQSCNVPSSFM 237

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
           SS SMHIGILA A HA +  + FTV+Y PR SP+EF++P+ KY ++V +N  ++GMRF+M
Sbjct: 238 SSHSMHIGILATAWHAVSTGTMFTVYYKPRTSPAEFIIPMDKYMESVKNN-FTIGMRFKM 296

Query: 306 MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            FE EE+  +R++GT+ G+   DP RW  S+WR L+V WDE+++  + +RVS WE+EP  
Sbjct: 297 RFEAEEAPEQRFLGTVIGVEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVEPAL 356

Query: 366 APFFICPPPFFRSKHPR 382
           AP  + P P  R K  R
Sbjct: 357 AP--LDPLPTCRLKRSR 371


>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 805

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/357 (54%), Positives = 246/357 (68%), Gaps = 4/357 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW ACAGPLV +P  G  V YFPQGH EQV ASM +    Q+  Y +LP KLLC +LNV
Sbjct: 24  ELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRVLNV 82

Query: 88  TLHADTETDEVYAQMTLQPVPS-YDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGG 146
            L A+T+TDEVYAQ+ L P P   D  A   S     S +P    FCKTLTASDTSTHGG
Sbjct: 83  ELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTASDTSTHGG 142

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           FSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FVS
Sbjct: 143 FSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVS 202

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA    S
Sbjct: 203 SKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKS 262

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R+ GTI G  +
Sbjct: 263 MFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFEGEEAPEQRFTGTIVGCEN 321

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQ 383
           LDP+ W +S WR L+V WDE +   + +RVS W+IEP ++P         R+K PRQ
Sbjct: 322 LDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKRPRQ 377


>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
          Length = 662

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 190/360 (52%), Positives = 253/360 (70%), Gaps = 7/360 (1%)

Query: 10  AASN--SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           AASN  SG+ GG     +  ELWHACAGPLV LP  G  V YFP+GH EQ+ ASM + ++
Sbjct: 2   AASNHSSGKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NK 126
            Q+P++ NLPSK+LC ++N+   A+ ETDEVYAQ+TL  +P  D+      D  ++   K
Sbjct: 62  QQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITL--LPELDQSEPTSPDAPVQEPEK 118

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
                FCKTLTASDTST GGFSV RR A+   PPLD S QPP QEL+A DLH++ W FRH
Sbjct: 119 CTVHSFCKTLTASDTSTQGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRH 178

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R E ++L +G+RR  RQ  N+ SSV+S
Sbjct: 179 IFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVIS 238

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMHIG+LA AAHA    + F+VFY PR S SEF+V + +Y +A  + ++S+GMRF+M 
Sbjct: 239 SHSMHIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEA-KTQKLSVGMRFKMR 297

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE EE+  +R+ GTI G+ +     W +S+WR+L+V WDE ++  +  RVS WE+EP+ A
Sbjct: 298 FEGEEAPEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVA 357


>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
          Length = 919

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/399 (52%), Positives = 271/399 (67%), Gaps = 48/399 (12%)

Query: 11  ASNSGEGGGGEKKTINT------ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVA----- 59
           +S+   G G ++  + T      ELWHACAGPL++LP  G+ VVYFPQGH EQ+A     
Sbjct: 15  SSDDANGDGDKRIGVETGSSVCPELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELH 74

Query: 60  -------------------------------ASMKKDIDGQIPNYPNLPSKLLCILLNVT 88
                                          +S+ + ++ Q+ +Y  LP ++LC +LNV 
Sbjct: 75  RGGRGSFLNVNHAAAPMAEEASSAAALNIPPSSISQAVNQQMLSY-KLPPQILCRVLNVN 133

Query: 89  LHADTETDEVYAQMTLQPVPSYDREALLRSDLALK-SNKPQTEFFCKTLTASDTSTHGGF 147
           LHAD E DEVYAQ+TL P  S   E  +   L++  S+ P    FCKTLTASDTSTHGGF
Sbjct: 134 LHADQEMDEVYAQLTLVP-DSEKNEKCMEEQLSVPPSSTPH--MFCKTLTASDTSTHGGF 190

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHI+RGQP+RHLLTTGWS+FVS 
Sbjct: 191 SVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSY 250

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGD+VLF+RDE  +L LGIRRA++Q +++ SSVLSS  +H G+LAA AHA A  S 
Sbjct: 251 KRLVAGDAVLFLRDENGELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSM 310

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           F ++YNPR SP+EFV+P  KY K+  ++  S+GMRF+M FETE++  RRY GTI GI D+
Sbjct: 311 FHIYYNPRTSPTEFVIPYHKYVKSF-NHSFSIGMRFKMRFETEDATERRYTGTIVGIGDV 369

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           DP+RW NS+WR+ +VGWDE  A E+++RVS WEIEP T+
Sbjct: 370 DPMRWPNSRWRSFKVGWDEHAAQERQDRVSPWEIEPFTS 408


>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
          Length = 799

 Score =  388 bits (996), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/357 (54%), Positives = 246/357 (68%), Gaps = 4/357 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW ACAGPLV +P  G  V YFPQGH EQV ASM +    Q+  Y +LP KLLC +LNV
Sbjct: 18  ELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRVLNV 76

Query: 88  TLHADTETDEVYAQMTLQPVPS-YDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGG 146
            L A+T+TDEVYAQ+ L P P   D  A   S     S +P    FCKTLTASDTSTHGG
Sbjct: 77  ELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTASDTSTHGG 136

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           FSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FVS
Sbjct: 137 FSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVS 196

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA    S
Sbjct: 197 SKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKS 256

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R+ GTI G  +
Sbjct: 257 MFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFEGEEAPEQRFTGTIVGCEN 315

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQ 383
           LDP+ W +S WR L+V WDE +   + +RVS W+IEP ++P         R+K PRQ
Sbjct: 316 LDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKRPRQ 371


>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
          Length = 822

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/357 (54%), Positives = 246/357 (68%), Gaps = 4/357 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW ACAGPLV +P  G  V YFPQGH EQV ASM +    Q+  Y +LP KLLC +LNV
Sbjct: 24  ELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRVLNV 82

Query: 88  TLHADTETDEVYAQMTLQPVPS-YDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGG 146
            L A+T+TDEVYAQ+ L P P   D  A   S     S +P    FCKTLTASDTSTHGG
Sbjct: 83  ELKAETDTDEVYAQIMLMPEPEQTDVPAEKPSSAPAASPRPAVRSFCKTLTASDTSTHGG 142

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           FSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FVS
Sbjct: 143 FSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVS 202

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA A HA    S
Sbjct: 203 SKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKS 262

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R+ GTI G  +
Sbjct: 263 MFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFEGEEAPEQRFTGTIVGCEN 321

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQ 383
           LDP+ W +S WR L+V WDE +   + +RVS W+IEP ++P         R+K PRQ
Sbjct: 322 LDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKRPRQ 377


>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
          Length = 920

 Score =  387 bits (995), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/393 (53%), Positives = 267/393 (67%), Gaps = 49/393 (12%)

Query: 18  GGGEKK-------TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVA----------- 59
           G G+K+       ++  ELWHACAGPL++LP  G+ VVYFPQGH EQ+A           
Sbjct: 21  GDGDKRIVVETGNSVCPELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGS 80

Query: 60  -------------------------ASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTE 94
                                    +S+ + ++ Q+ +Y  LP ++LC +LNV LHAD E
Sbjct: 81  FLNINQAVTPMAEEASSAASLNIPPSSISQAVNQQMLSY-KLPPQILCRVLNVNLHADQE 139

Query: 95  TDEVYAQMTLQPVPSYDREALLRSDLALK-SNKPQTEFFCKTLTASDTSTHGGFSVPRRA 153
            DEVYAQ+TL P  S   E  +   L +  S+ P    FCKTLTASDTSTHGGFSVPRRA
Sbjct: 140 MDEVYAQLTLVP-DSEKSEKCIEEQLPVPPSSTPH--MFCKTLTASDTSTHGGFSVPRRA 196

Query: 154 AEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAG 213
           AE  FPPLD+S Q P+QEL+A+DLH   W FRHI+RGQP+RHLLTTGWS+FVS KRL AG
Sbjct: 197 AEDCFPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAG 256

Query: 214 DSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYN 273
           D+VLF+RDE  +L LGIRRA++Q +++ SSVLSS  +H G+LAA AHA A  S F +FYN
Sbjct: 257 DAVLFLRDENGELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIFYN 316

Query: 274 PRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWK 333
           PR SP+EFV+P  KY K+  ++  S+GMRF+M FETE++  RRY GTI GI D+DP+RW 
Sbjct: 317 PRTSPTEFVIPYHKYVKSF-NHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWP 375

Query: 334 NSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           NS+WR+ +VGWDE  A E++ RVS WEIEP T+
Sbjct: 376 NSEWRSFKVGWDEHAAQERQERVSPWEIEPFTS 408


>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
          Length = 640

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/365 (52%), Positives = 253/365 (69%), Gaps = 7/365 (1%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G     +  ELWHACAGPLVN+P     V YFPQGH EQ+ ASM + +D ++P++ NLPS
Sbjct: 13  GTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPS 71

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-EFFCKTLT 137
           K+LC ++NV L A+ ETDEVYAQ+TL P P  D+  +   D  L   +  T   FCKTLT
Sbjct: 72  KILCKVVNVHLRAEPETDEVYAQVTLLPEP--DQSEITSPDPPLPEPQSCTVHSFCKTLT 129

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH N W FRHI+RGQP+RHLL
Sbjct: 130 ASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLL 189

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+  SV+SS SMH+G+LA 
Sbjct: 190 TTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSVISSHSMHLGVLAT 249

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA    + F+VFY P  SPSEF+V + KY +A  ++++S+GMRF+M FE +E+  RR+
Sbjct: 250 ASHAITTGTLFSVFYKP--SPSEFIVSVNKYLEA-RNHKVSVGMRFKMRFEGDEAPERRF 306

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            GTI G+ D     W +S+WR+L+V WDE ++  +  RVS WE+EP+     +   P  R
Sbjct: 307 SGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPLTAQPMQR 366

Query: 378 SKHPR 382
           SK PR
Sbjct: 367 SKRPR 371


>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
 gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 841

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/368 (51%), Positives = 246/368 (66%), Gaps = 13/368 (3%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
            ELW ACAGPLV +PA G  V Y PQGH EQV AS  +  + Q     NLP K+ C ++N
Sbjct: 31  VELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMN 90

Query: 87  VTLHADTETDEVYAQMTLQPVPSYD----------REALLRSDLA--LKSNKPQTEFFCK 134
           V L A+ +TDEVYAQ+TL P    D          ++ +   ++     + +P+   FCK
Sbjct: 91  VELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCK 150

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RGQP+R
Sbjct: 151 TLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRR 210

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ AN+ SSV+SS SMH+G+
Sbjct: 211 HLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGV 270

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LA A HA    + FTV+Y PR SPSEFVVP   Y +++  N  S+GMRF+M FE EE+  
Sbjct: 271 LATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNH-SIGMRFKMTFEGEEAAE 329

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           +R+ GTI G+ D DP  W +S+WR+L+V WDE+ +  + +RVS W+IEP  +P  + P P
Sbjct: 330 QRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLP 389

Query: 375 FFRSKHPR 382
             R+K  R
Sbjct: 390 APRTKRAR 397


>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
          Length = 672

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/373 (52%), Positives = 254/373 (68%), Gaps = 7/373 (1%)

Query: 13  NSGEGG--GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQI 70
           NSG  G  G     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D  +
Sbjct: 3   NSGVAGALGSSSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQHL 62

Query: 71  PNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD-LALKSNKPQT 129
           P + NLPSK+LC ++NV L A+T++DEVYAQ+ LQP    D+     +D    +  K   
Sbjct: 63  PLF-NLPSKILCKVVNVELRAETDSDEVYAQIMLQP--ETDQSEPSSADPEPHEPEKCNA 119

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR AE+  PPLD +  PP QEL+A+DLH N W FRHI+R
Sbjct: 120 HSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFR 179

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLLTTGWS+FVS KRL AGD+ +F+R +   L +G+RR  RQ  N+ SSV+SS S
Sbjct: 180 GQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQLNNMPSSVISSHS 239

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A  +N++S+GMRF+M FE 
Sbjct: 240 MHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEA-KNNKMSVGMRFKMRFEG 298

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF 369
           +E+  RR+ GTI G+  +    W +S WR+L+V WDE +A  + +RVS WE+EP+ A   
Sbjct: 299 DEAPERRFSGTIIGVGSMTTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELEPLVATSI 358

Query: 370 ICPPPFFRSKHPR 382
             P P  R+K  R
Sbjct: 359 QPPQPPARNKRAR 371


>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
 gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
          Length = 671

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 249/350 (71%), Gaps = 5/350 (1%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
            G     +  ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM + ++ Q+P++ NLP
Sbjct: 13  AGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLP 71

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTL 136
           SK+LC ++N+ L A+ ETDEVYAQ+TL  +P  D+  +   D  L +  +     FCKTL
Sbjct: 72  SKILCKVVNIHLRAEPETDEVYAQITL--LPETDQSEVTSPDDPLPEPPRCTVHSFCKTL 129

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSV RR A+   PPLD + QPP QEL+A DLH N W FRHI+RGQP+RHL
Sbjct: 130 TASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHL 189

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ +N+ SSV+SS SMH+G+LA
Sbjct: 190 LTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVISSHSMHLGVLA 249

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
            A+HA +  + F+VFY PR S SEF+V + KY +A  ++++S+GMRF+M FE +E   RR
Sbjct: 250 TASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEA-RNHKLSVGMRFKMRFEGDEVPERR 308

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           + GTI G+ D     W +S+WR+L+V WDE ++  + +RVS WE+EP+ +
Sbjct: 309 FSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 358


>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
          Length = 681

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 242/347 (69%), Gaps = 3/347 (0%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV+LP  G  V YFPQGH EQ+ ASM + ++ Q+P++ NLPSK+LC ++NV
Sbjct: 30  ELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPSKILCKVVNV 88

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
              A+ ETDEVYAQ+TL P P  + E         +  K     FCKTLTASDTSTHGGF
Sbjct: 89  QRRAEPETDEVYAQITLLPEPDPN-EVTSPDPPPPEPEKCTVHSFCKTLTASDTSTHGGF 147

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV RR A+   PPLD S QPP QEL+A DLH N W FRHI+RGQP+RHLLTTGWS+FVS 
Sbjct: 148 SVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSS 207

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           K+L AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS SMH+G+LA A+HA A  + 
Sbjct: 208 KKLVAGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHLGVLATASHAIATGTL 267

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           F++FY PR S SEF+V + KY +A   +++S+GMRF+M FE EE     + G I G+ D 
Sbjct: 268 FSIFYKPRTSRSEFIVSVNKYLEA-RKHKLSVGMRFKMRFEGEEVPDEGFSGIIVGVEDN 326

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
               W NS+WR+L+V WDE ++  + +RVS WE+EP+ A     PPP
Sbjct: 327 KTSAWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPP 373


>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
          Length = 882

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/360 (52%), Positives = 249/360 (69%), Gaps = 6/360 (1%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
           +ELW ACAGPLV +P  G  V YFPQGH EQV AS  +  + ++  Y NLP K+LC ++N
Sbjct: 69  SELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLY-NLPWKILCEVMN 127

Query: 87  VTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN----KPQTEFFCKTLTASDTS 142
           V L A+++TDEVYAQ+TL P      E     +++   +    +P+   FCKTLTASDTS
Sbjct: 128 VELKAESDTDEVYAQLTLLPESKQQEENASTEEVSAAPSAAPVRPRVHSFCKTLTASDTS 187

Query: 143 THGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWS 202
           THGGFSV RR A++  PPLD S QPP QEL A+DLH   W FRHI+RGQP+RHLL +GWS
Sbjct: 188 THGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQSGWS 247

Query: 203 LFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAA 262
           +FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA 
Sbjct: 248 VFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHAV 307

Query: 263 ANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTIT 322
              + FTV+Y PR SP+EFVVP  +Y +++  N  S+GMRF+M FE EE+  +R+ GTI 
Sbjct: 308 NTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRN-YSIGMRFKMRFEGEEAPEQRFTGTIV 366

Query: 323 GISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           G+ D DP  W  S+WR+L+V WDE+++  +  RVS W+IEP  +P  I P P  R+K PR
Sbjct: 367 GMGDSDPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVPRTKRPR 426


>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 620

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/350 (54%), Positives = 241/350 (68%), Gaps = 9/350 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N ELWHACAGPL  LP   + V+Y+PQGH EQV A+   D+      + NLP+ LLC +
Sbjct: 4   LNCELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAA---DVYQASKQFSNLPAHLLCRI 60

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
             + L AD +TDEV+AQM L P     +E     D      +     FCKTLTASDTSTH
Sbjct: 61  SKIELQADPQTDEVFAQMDLTPQYELSKET---KDAPSPIQQSNVRSFCKTLTASDTSTH 117

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPRRAAE+  P LD +M PP QEL+A+DLH   W+FRHIYRG P+RHLLTTGWS+F
Sbjct: 118 GGFSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGWSVF 177

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS KRL AGD+V+F+R E  QL +G+RRA++Q     S+  SS ++H+G+LAAA+HAA  
Sbjct: 178 VSQKRLVAGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAASHAATE 237

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
              F+V YNPR SPSEFV+P  KY ++   N +++G RF+M FETEES  RRY GTI  I
Sbjct: 238 RLRFSVIYNPRTSPSEFVIPYHKYLRS-EDNNLTVGSRFKMKFETEESTERRYSGTIVEI 296

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           SD+DP++W +S WR+++V WDES A E+  RVS WEIEP+  P    P P
Sbjct: 297 SDVDPLKWPSSAWRSMKVEWDES-ASERHERVSPWEIEPLV-PISTLPTP 344


>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
          Length = 973

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/343 (57%), Positives = 226/343 (65%), Gaps = 56/343 (16%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G KK IN+ELWHACAGPLV LP  G+ V YFPQGHSEQVAA+ +K  + +IPNYPNLPS+
Sbjct: 31  GAKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQ 90

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           LLC + N+TLHAD +TDEVYAQMTLQPV S      + +  A   +K  TE+FCK LTAS
Sbjct: 91  LLCQVHNITLHADKDTDEVYAQMTLQPVNSETDVFPIPTLGAYTKSKHPTEYFCKNLTAS 150

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAEK+FP LD+SMQPP QEL+ RDLHDN+WTFRHIYRGQPKRHLLTT
Sbjct: 151 DTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTT 210

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWSL       F G                                            A 
Sbjct: 211 GWSL-------FVG--------------------------------------------AK 219

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
              A +S   +    R SPS FV+P+A+Y KA +  Q S+GMRF MMFETEES  RRY G
Sbjct: 220 RLKAGDSVLFI----RTSPSPFVIPVARYNKATYM-QPSVGMRFAMMFETEESSKRRYTG 274

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           T+ GISD DP+RW NS+WRNLQV WDE   GE+  RVSIW+IE
Sbjct: 275 TVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 317


>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 398

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 190/351 (54%), Positives = 238/351 (67%), Gaps = 9/351 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ ELWHACAGPL  LP   +HV+Y+PQGH EQV A+   D+      + NLP+ LLC +
Sbjct: 4   LDCELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAA---DVYQASKQFSNLPAHLLCKI 60

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLR-SDLALKSNKPQTEFFCKTLTASDTST 143
             + L AD  TDEV+AQM L   P Y+ E      D    + +     FCKTLTASDTST
Sbjct: 61  SKIELQADPHTDEVFAQMDL--TPQYETEFTKEMKDAPPPTMQKNVRSFCKTLTASDTST 118

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           HGGFSVPRRAAE   P LD SM PP QEL+A+DLH   W FRHIYRG P+RHLLTTGWS+
Sbjct: 119 HGGFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTGWSV 178

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FVS KRL AGD+V+F+R E  QL +G+RRA++Q     S+  S+ ++H+G+LAAA+HAA 
Sbjct: 179 FVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAAASHAAT 238

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITG 323
               F+V YNPR SPSEFV+P  KY K    N +++G RF+M FE++ES  RRY GTI  
Sbjct: 239 ERLRFSVIYNPRTSPSEFVIPYHKYLK-TKENNLTVGSRFKMKFESDESTERRYSGTIVE 297

Query: 324 ISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           +SD DP++W NS WR+++V WDES A E+  RVS WEIEP   P    P P
Sbjct: 298 VSDADPLKWPNSAWRSMKVEWDES-ASERHERVSPWEIEPF-VPISTLPTP 346


>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
 gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
 gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 840

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/367 (50%), Positives = 246/367 (67%), Gaps = 12/367 (3%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
            ELW ACAGPLV +PA G  V Y PQGH EQV AS  +  + Q     NLP K+ C ++N
Sbjct: 31  VELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMN 90

Query: 87  VTLHADTETDEVYAQMTLQPVP---------SYDREALLRSDLA--LKSNKPQTEFFCKT 135
           V L A+ +TDEVYAQ+TL P           +  ++ +   ++     + +P+   FCKT
Sbjct: 91  VELKAEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKT 150

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RGQP+RH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRH 210

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           LL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ AN+ SSV+SS SMH+G+L
Sbjct: 211 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVL 270

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           A A HA    + FTV+Y PR SPSEFVVP   Y +++  N  S+GMRF+M FE EE+  +
Sbjct: 271 ATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNH-SIGMRFKMTFEGEEAAEQ 329

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           R+ GTI G+ D DP  W +S+WR+L+V WDE+ +  + +RVS W+IEP  +P  + P P 
Sbjct: 330 RFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPA 389

Query: 376 FRSKHPR 382
            R+K  R
Sbjct: 390 PRTKRAR 396


>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 826

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/361 (52%), Positives = 247/361 (68%), Gaps = 10/361 (2%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQV ASM +    Q+  Y +LPSKLLC +LNV
Sbjct: 25  ELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLY-DLPSKLLCRVLNV 83

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN------KPQTEFFCKTLTASDT 141
            L A+ +TDEVYAQ+ L P P     A   ++ +  +       +P    FCKTLTASDT
Sbjct: 84  ELKAEADTDEVYAQVMLMPEPEQSEAAATTTEKSSSATGGTMPARPAVRSFCKTLTASDT 143

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GW
Sbjct: 144 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGW 203

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           S+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N++SSV+SS SMH+G+LA A HA
Sbjct: 204 SVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLATAWHA 263

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
               + FTV+Y PR S SEF++P  KY ++V  N  S+G RF+M FE EE+  +R+ GTI
Sbjct: 264 INTKTMFTVYYKPRTSRSEFIIPYDKYTESV-KNIYSIGTRFKMRFEGEEAPEQRFTGTI 322

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
            G  +LD + W  S WR+L+V WDES+   + +RVS WEIEP ++P  + P P  R+K  
Sbjct: 323 VGSDNLDQL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSP-PVNPLPLSRAKRS 380

Query: 382 R 382
           R
Sbjct: 381 R 381


>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
 gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
          Length = 678

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/365 (53%), Positives = 253/365 (69%), Gaps = 10/365 (2%)

Query: 8   AGAASNSGEGG---GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASM-K 63
           A  ASN   GG   G     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS   
Sbjct: 2   ALVASNYPSGGPHAGAPCDALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTTH 61

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL- 122
           + +D Q+P++ NLPSK+LC +++V L A+ ETDEVYAQ+TL P P  D+  +   D  L 
Sbjct: 62  QGLDQQMPSF-NLPSKILCKVVHVQLRAEPETDEVYAQVTLLPEP--DQSEITSPDPPLP 118

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
           +  +     FCKTLTASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH N W
Sbjct: 119 EPQRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEW 178

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS 242
            FRHI+RGQP+RHLLTTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ +N+ S
Sbjct: 179 HFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSNMPS 238

Query: 243 SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMR 302
           SV+SS SMH+G+LA A+HA +  + F+VFY PR S SEF+V L KY +A  ++++S+GMR
Sbjct: 239 SVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSLNKYLEA-RNHKLSVGMR 297

Query: 303 FRMMFETEESGTRRYMGTITGISDLDPVR-WKNSQWRNLQVGWDESTAGEKRNRVSIWEI 361
           F+M FE EE   RR+ GTI G+ D +    W +S+WR+L+V WDE  +  +  RVS WE+
Sbjct: 298 FKMRFEGEEVPERRFSGTIVGVGDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAWEL 357

Query: 362 EPVTA 366
           EP+ A
Sbjct: 358 EPLVA 362


>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
          Length = 905

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/352 (53%), Positives = 246/352 (69%), Gaps = 12/352 (3%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP-NLPSKL 80
           K +I  ELWHACAGPL++LP  G  VVYFPQGH EQ++++ K+      P  P +LP ++
Sbjct: 34  KSSICMELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQI 93

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPS------YDREALLRSDLALKSNKPQTEFFCK 134
            C +LNV L AD ETDEV+AQ+TL P P        D E    S L+    KP    FCK
Sbjct: 94  FCRVLNVNLLADQETDEVFAQVTLVPEPEPVGDNFQDEENQNASVLS----KPTLHMFCK 149

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD++ Q P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQPRR 209

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS K L    +VLF+R E  +L LGIRR NR+ +++ SSV S  ++++ +
Sbjct: 210 HLLTTGWSVFVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVYLSV 269

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           +AAA +A A  S F +FYNPRASP+EF++P  KY ++   + + +G RFRM FE+E++  
Sbjct: 270 IAAATNAVATKSMFHIFYNPRASPAEFIIPYQKYVRSCKQSLL-VGTRFRMKFESEDTAE 328

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           +RY G +T I D DPV+W  S+WR+L+V WDE +  E++ RVS WEIEP  A
Sbjct: 329 KRYTGIVTSIGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEPSIA 380


>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
          Length = 678

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 240/347 (69%), Gaps = 19/347 (5%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D  +P + NLPSK+LC ++NV
Sbjct: 26  ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCKVVNV 84

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ--------TEFFCKTLTAS 139
            L A+T++DEVYAQ+ LQP    +          L S KP+           FCKTLTAS
Sbjct: 85  ELRAETDSDEVYAQIMLQPEADQNE---------LTSPKPEPHEPEKCNVHSFCKTLTAS 135

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSV RR AE+  PPLD +  PP QEL+ARDLH N W FRHI+RGQP+RHLLTT
Sbjct: 136 DTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTT 195

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS SMH+G+LA A+
Sbjct: 196 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATAS 255

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA +  + F+VFY PR S SEFVV   KY +A +S +IS+GMRF+M FE +E+  RR+ G
Sbjct: 256 HAISTGTLFSVFYKPRTSQSEFVVSANKYLEAKNS-KISVGMRFKMRFEGDEAPERRFSG 314

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           TI G+  +    W NS WR+L+V WDE +   + +RVS WE+EP+  
Sbjct: 315 TIIGVGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAV 361


>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
 gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
 gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
           Group]
 gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
 gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
          Length = 678

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 188/347 (54%), Positives = 240/347 (69%), Gaps = 19/347 (5%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D  +P + NLPSK+LC ++NV
Sbjct: 26  ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCKVVNV 84

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ--------TEFFCKTLTAS 139
            L A+T++DEVYAQ+ LQP    +          L S KP+           FCKTLTAS
Sbjct: 85  ELRAETDSDEVYAQIMLQPEADQNE---------LTSPKPEPHEPEKCNVHSFCKTLTAS 135

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSV RR AE+  PPLD +  PP QEL+ARDLH N W FRHI+RGQP+RHLLTT
Sbjct: 136 DTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTT 195

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS SMH+G+LA A+
Sbjct: 196 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATAS 255

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA +  + F+VFY PR S SEFVV   KY +A +S +IS+GMRF+M FE +E+  RR+ G
Sbjct: 256 HAISTGTLFSVFYKPRTSQSEFVVSANKYLEAKNS-KISVGMRFKMRFEGDEAPERRFSG 314

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           TI G+  +    W NS WR+L+V WDE +   + +RVS WE+EP+  
Sbjct: 315 TIIGVGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAV 361


>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
          Length = 817

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/370 (51%), Positives = 251/370 (67%), Gaps = 7/370 (1%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           GGGG +  + TELW+ CAGPLV +P  G  V YFPQGH EQV AS  +  +  +  Y +L
Sbjct: 64  GGGGTEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DL 122

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTL----QPVPSYDREALLRSDLALKSNKPQTEFF 132
           P K+LC ++NV L A+ + DEVYAQ+TL    +P  +   E +  S  A  + +P+   F
Sbjct: 123 PWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALA-RPRVHSF 181

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
           CKTLTASDTSTHGGFSV RR A++  PPLD + QPP QEL+A+DLH   W FRHI+RGQP
Sbjct: 182 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQP 241

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
           +RHLL +GWS+FVS KRL AGD+ +F+R +  +L +G+RRA RQ AN+ SSV+SS SMH+
Sbjct: 242 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHL 301

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
           G+LA A HA    + FTV+Y PR SP+EFVVP  +Y +++  N   +GMRF+M FE EE+
Sbjct: 302 GVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRN-YPIGMRFKMRFEGEEA 360

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP 372
             +R+ GTI G  D D   W  S+WR L+V WDE+++  +  RVS W+IEP  +P  I P
Sbjct: 361 PEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINP 420

Query: 373 PPFFRSKHPR 382
            P  R K PR
Sbjct: 421 LPVHRPKRPR 430


>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
 gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
          Length = 669

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 253/376 (67%), Gaps = 9/376 (2%)

Query: 11  ASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQI 70
           A+N G G G     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D  +
Sbjct: 4   AANPG-GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYL 62

Query: 71  PNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NKPQT 129
           P + NLPSK+LC ++NV L A+ ++DEVYAQ+ LQP    D+  L   D  L+   K   
Sbjct: 63  PMF-NLPSKILCSVVNVELRAEADSDEVYAQIMLQP--EADQSELTSLDPELQDLEKCTA 119

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH   W FRHI+R
Sbjct: 120 HSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFR 179

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS S
Sbjct: 180 GQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHS 239

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A   N +S+GMRF+M FE 
Sbjct: 240 MHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQN-LSVGMRFKMRFEG 298

Query: 310 EESGTRRYMGTITGISDLDPVR---WKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           +E+  RR+ GTI GI  +  +    W +S W++L+V WDE +A  + +RVS WE+EP+ A
Sbjct: 299 DEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDA 358

Query: 367 PFFICPPPFFRSKHPR 382
                P P  R+K  R
Sbjct: 359 SNPQPPQPPLRNKRAR 374


>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
          Length = 739

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/365 (52%), Positives = 253/365 (69%), Gaps = 5/365 (1%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G     +  ELWHACAGPLV LP     V YFPQGH EQ+ ASM + ++ Q+P++ NLPS
Sbjct: 78  GLSSDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPS 136

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           K+LC ++NV L A+++TDEVYAQ+TL  +P  ++  +   D  L +  +     FCKTLT
Sbjct: 137 KILCKVVNVVLRAESDTDEVYAQITL--LPESNQNEVTSPDPPLPEPTRCNVHSFCKTLT 194

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV RR A+   PPLD S QPP QEL+A DLH N W FRHI+RGQP+RHLL
Sbjct: 195 ASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLL 254

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K+L AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS SMH+G+LA 
Sbjct: 255 TTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLAT 314

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA +  + F+VFY PR S S F+V L KY +A  ++++S+GMRF+M FE EE   R +
Sbjct: 315 ASHAISTGTLFSVFYKPRTSRSTFLVSLNKYLEA-QNHKLSVGMRFKMRFEGEEVPERSF 373

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            GTI G+ D     W NS+WR+L+V WDE ++  + ++VS WE+EP+ A   +   P  R
Sbjct: 374 SGTIVGLGDNASPGWANSEWRSLKVQWDEPSSILRPDKVSAWELEPLVASNPLSTQPTQR 433

Query: 378 SKHPR 382
           +K PR
Sbjct: 434 NKRPR 438


>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
 gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
          Length = 376

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/345 (54%), Positives = 248/345 (71%), Gaps = 3/345 (0%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG-QIPNYPNLPSKLLC 82
            +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  D  Q+P Y NLP K+LC
Sbjct: 3   ALYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAY-NLPPKILC 61

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTS 142
            ++NV L A+ +TDEV+AQ+ L PV   D + + + DL     +P+   FCK LTASDTS
Sbjct: 62  RVVNVQLKAELDTDEVFAQVILLPVAEQDVDLVEKEDLPPPPARPRVHSFCKMLTASDTS 121

Query: 143 THGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWS 202
           THGGFSV RR A++  PPLD S+QPPAQEL+A+DLH N W FRHI+RGQP+RHLL +GWS
Sbjct: 122 THGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWS 181

Query: 203 LFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAA 262
           LFVS K+L AGD+ +F+R E ++L +G+RRA  QP+N+ SSV+SS SMHIGILA   HA 
Sbjct: 182 LFVSAKKLVAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHIGILATVWHAV 241

Query: 263 ANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTIT 322
           +  S FTV+Y PR SP+EF++P+ KY ++V  N  ++GMRF+M FE EE+  +R+ GT+ 
Sbjct: 242 STGSMFTVYYKPRTSPAEFIIPIDKYRESVKIN-YAIGMRFKMKFEAEEAPEQRFSGTVI 300

Query: 323 GISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           G+ + DP +W  S+WR L+V WDE++   + +RVS W+IE   AP
Sbjct: 301 GVEEADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIERALAP 345


>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
 gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
 gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
          Length = 673

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 193/370 (52%), Positives = 249/370 (67%), Gaps = 8/370 (2%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           G G     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D  +P + NL
Sbjct: 13  GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMF-NL 71

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NKPQTEFFCKT 135
           PSK+LC ++NV L A+ ++DEVYAQ+ LQP    D+  L   D  L+   K     FCKT
Sbjct: 72  PSKILCSVVNVELRAEADSDEVYAQIMLQP--EADQSELTSLDPELQDLEKCTAHSFCKT 129

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH   W FRHI+RGQP+RH
Sbjct: 130 LTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRH 189

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           LLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS SMH+G+L
Sbjct: 190 LLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHSMHLGVL 249

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           A A+HA +  + F+VFY PR S SEFVV + KY +A   N +S+GMRF+M FE +E+  R
Sbjct: 250 ATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQN-LSVGMRFKMRFEGDEAPER 308

Query: 316 RYMGTITGISDLDPVR---WKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP 372
           R+ GTI GI  +  +    W +S W++L+V WDE +A  + +RVS WE+EP+ A     P
Sbjct: 309 RFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNPQPP 368

Query: 373 PPFFRSKHPR 382
            P  R+K  R
Sbjct: 369 QPPLRNKRAR 378


>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
 gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
          Length = 853

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/343 (53%), Positives = 238/343 (69%), Gaps = 7/343 (2%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
           TELW ACAGPLV +P  G  V YFPQGH EQV AS  +  + ++  Y NLP K+LC ++N
Sbjct: 40  TELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEVMN 98

Query: 87  VTLHADTETDEVYAQMTLQPVPSYDR-----EALLRSDLALKSNKPQTEFFCKTLTASDT 141
           V L A+ +TDEVYAQ+TL P           E  + S  A    +P+   FCKTLTASDT
Sbjct: 99  VELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDT 158

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSV RR A++  PPLD S QPP QEL+A+DLH   W FRHI+RGQP+RHLL +GW
Sbjct: 159 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGW 218

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           S+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA
Sbjct: 219 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHA 278

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
               + FTV+Y PR SP+EFVVP  +Y +++  N  S+GMRF+M FE EE+  +R+ GTI
Sbjct: 279 VNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQN-YSIGMRFKMRFEGEEAPEQRFTGTI 337

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            G+ D DP  W  S+WR+L+V WDE+++  +  RVS W+IEP 
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPA 380


>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
 gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
          Length = 852

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/343 (53%), Positives = 238/343 (69%), Gaps = 7/343 (2%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
           TELW ACAGPLV +P  G  V YFPQGH EQV AS  +  + ++  Y NLP K+LC ++N
Sbjct: 39  TELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEVMN 97

Query: 87  VTLHADTETDEVYAQMTLQPVPSYDR-----EALLRSDLALKSNKPQTEFFCKTLTASDT 141
           V L A+ +TDEVYAQ+TL P           E  + S  A    +P+   FCKTLTASDT
Sbjct: 98  VELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDT 157

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSV RR A++  PPLD S QPP QEL+A+DLH   W FRHI+RGQP+RHLL +GW
Sbjct: 158 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGW 217

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           S+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA
Sbjct: 218 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHA 277

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
               + FTV+Y PR SP+EFVVP  +Y +++  N  S+GMRF+M FE EE+  +R+ GTI
Sbjct: 278 VNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQN-YSIGMRFKMRFEGEEAPEQRFTGTI 336

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            G+ D DP  W  S+WR+L+V WDE+++  +  RVS W+IEP 
Sbjct: 337 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPA 379


>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
          Length = 836

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/343 (53%), Positives = 238/343 (69%), Gaps = 7/343 (2%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
           TELW ACAGPLV +P  G  V YFPQGH EQV AS  +  + ++  Y NLP K+LC ++N
Sbjct: 23  TELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEVMN 81

Query: 87  VTLHADTETDEVYAQMTLQPVPSYDR-----EALLRSDLALKSNKPQTEFFCKTLTASDT 141
           V L A+ +TDEVYAQ+TL P           E  + S  A    +P+   FCKTLTASDT
Sbjct: 82  VELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDT 141

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSV RR A++  PPLD S QPP QEL+A+DLH   W FRHI+RGQP+RHLL +GW
Sbjct: 142 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGW 201

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           S+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA
Sbjct: 202 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHA 261

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
               + FTV+Y PR SP+EFVVP  +Y +++  N  S+GMRF+M FE EE+  +R+ GTI
Sbjct: 262 VNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQN-YSIGMRFKMRFEGEEAPEQRFTGTI 320

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            G+ D DP  W  S+WR+L+V WDE+++  +  RVS W+IEP 
Sbjct: 321 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPA 363


>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
           [Medicago truncatula]
          Length = 670

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/353 (52%), Positives = 249/353 (70%), Gaps = 9/353 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G     +  ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM + ++ Q+P++ NLPS
Sbjct: 9   GSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSF-NLPS 67

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
           K+LC ++N+ L A+ ETDEVYAQ+TL  +P  D+  +   D  L +  +     FCKTLT
Sbjct: 68  KILCKVVNIHLRAEPETDEVYAQITL--LPETDQSEVTSPDDPLPEPPRCTVHSFCKTLT 125

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV RR A+   PPLD + QPP QEL+A DLH N W FRHI+RGQP+RHLL
Sbjct: 126 ASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLL 185

Query: 198 TTGWSLFVSGKRLFAGDSVLFIR----DEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           TTGWS+FVS K+L AGD+ +F+R     E  +L +G+RR  RQ +N+ SSV+SS SMH+G
Sbjct: 186 TTGWSVFVSSKKLVAGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSVISSHSMHLG 245

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LA A+HA +  + F+VFY PR S SEF+V + KY +A  ++++S+GMRF+M FE +E  
Sbjct: 246 VLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEA-RNHKLSVGMRFKMRFEGDEVP 304

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            RR+ GTI G+ D     W +S+WR+L+V WDE ++  + +RVS WE+EP+ +
Sbjct: 305 ERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 357


>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
 gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
          Length = 853

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/343 (53%), Positives = 239/343 (69%), Gaps = 7/343 (2%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
           TELW ACAGPLV +P  G  V YFPQGH EQV AS  +  + ++  Y NLP K+LC ++N
Sbjct: 40  TELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEVMN 98

Query: 87  VTLHADTETDEVYAQMTLQPV-----PSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           V L A+ +TDEVYAQ+TL P       +   E  + S  A    +P+   FCKTLTASDT
Sbjct: 99  VELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASDT 158

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSV RR A++  PPLD S QPP QEL+A+DLH   W FRHI+RGQP+RHLL +GW
Sbjct: 159 STHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGW 218

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           S+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA
Sbjct: 219 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAWHA 278

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
               + FTV+Y PR SP+EFVVP  +Y +++  N  S+GMRF+M FE EE+  +R+ GTI
Sbjct: 279 VNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRN-YSIGMRFKMRFEGEEAPEQRFTGTI 337

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            G+ D DP  W  S+WR+L+V WDE+++  +  RVS W+IEP 
Sbjct: 338 VGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPA 380


>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
          Length = 673

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/340 (53%), Positives = 243/340 (71%), Gaps = 5/340 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM + ++ Q+P++ +LPSK+LC + +V
Sbjct: 22  ELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSF-DLPSKILCKVASV 80

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NKPQTEFFCKTLTASDTSTHGG 146
              A+ +TDEVYAQ+TL  VP  D+  ++  D  L+   +     FCKTLTASDTSTHGG
Sbjct: 81  QRKAEPDTDEVYAQITL--VPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTHGG 138

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           FSV RR A+   PPLD + QPP QEL+A DLH N W FRHI+RGQP+RHLLTTGWS+FVS
Sbjct: 139 FSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVS 198

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            K+L AGD+ +F+R     L +G+RR  RQ AN+ SSV+SS SMH+G+LA A++A +  S
Sbjct: 199 SKKLVAGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLGVLATASYALSTRS 258

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            F++FY PR S SEF+V + KY +A  S+++S+GMRF+M FE EE   RR+ GTI G+  
Sbjct: 259 MFSIFYKPRTSLSEFIVSVNKYLEA-RSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEA 317

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
                W +S+WR+L+V WDE ++  + +RVS WE+EP+ A
Sbjct: 318 DKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVA 357


>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
          Length = 660

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 252/376 (67%), Gaps = 9/376 (2%)

Query: 11  ASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQI 70
           A+N G G G     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D  +
Sbjct: 4   AANPG-GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYL 62

Query: 71  PNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NKPQT 129
           P + NLPSK+LC ++NV L A+ ++DEVYAQ+ LQP    D+  L   D  L+   K   
Sbjct: 63  PMF-NLPSKILCSVVNVELRAEADSDEVYAQIMLQP--EADQSELTSLDPELQDLEKCTA 119

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH   W FRHI+R
Sbjct: 120 HSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFR 179

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS S
Sbjct: 180 GQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHS 239

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A   N +S+GMRF+M FE 
Sbjct: 240 MHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQN-LSVGMRFKMRFEG 298

Query: 310 EESGTRRYMGTITGISDLDPVR---WKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           +E+  RR+ GTI GI  +  +    W +S W++L+V WDE +A    +RVS WE+EP+ A
Sbjct: 299 DEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVCPDRVSPWELEPLDA 358

Query: 367 PFFICPPPFFRSKHPR 382
                P P  R+K  R
Sbjct: 359 SNPQPPQPPLRNKRAR 374


>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
          Length = 857

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 185/345 (53%), Positives = 240/345 (69%), Gaps = 11/345 (3%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
           TELW ACAGPLV +P  G    YFPQGH EQV AS  +  + ++  Y NLP K+LC ++N
Sbjct: 39  TELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEVMN 97

Query: 87  VTLHADTETDEVYAQMTLQPVPSYDR-------EALLRSDLALKSNKPQTEFFCKTLTAS 139
           V L A+ +TDEVYAQ+TL  +P   R       E  + S  A    +P+   FCKTLTAS
Sbjct: 98  VELKAEPDTDEVYAQLTL--LPELKRQEDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTAS 155

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH   W FRHI+RGQP+RHLL +
Sbjct: 156 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQS 215

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A 
Sbjct: 216 GWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMHLGVLATAW 275

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA    + FTV+Y PR SP+EFVVP  +Y +++  N  S+GMRF+M FE+EE+  +R+ G
Sbjct: 276 HAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRN-YSIGMRFKMRFESEEAPEQRFTG 334

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           TI G+ D DP  W  S+WR+L+V WDE+++  +  RVS W+IEP 
Sbjct: 335 TIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPA 379


>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
          Length = 672

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/385 (51%), Positives = 256/385 (66%), Gaps = 22/385 (5%)

Query: 7   TAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI 66
           +AG A  SG  G      +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +
Sbjct: 3   SAGVAGCSGSAGDA----LFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQL 58

Query: 67  DGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNK 126
           D  +P + +LP K+LC ++NV L A+T++DEVYAQ+ LQP      EA      +  S  
Sbjct: 59  DQHLPLF-DLPPKILCKVVNVELRAETDSDEVYAQIMLQP------EADQSEPTSPDSEP 111

Query: 127 PQTEF-----FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNI 181
           P+ E      FCKTLTASDTSTHGGFSV RR AE+  P LD +  PP QEL+A+DLH N 
Sbjct: 112 PEPERCNVYSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNE 171

Query: 182 WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLS 241
           W FRHI+RGQP+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ 
Sbjct: 172 WHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMP 231

Query: 242 SSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGM 301
           SSV+SS +MH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A  ++++S+GM
Sbjct: 232 SSVISSHNMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEA-KNHKVSVGM 290

Query: 302 RFRMMFETEESGTRRYMGTITGISDLDPVR----WKNSQWRNLQVGWDESTAGEKRNRVS 357
           RF+M FE +ES  RR  GTI G+  + P      W NS WR+L+V WDE +A  + +RVS
Sbjct: 291 RFKMRFEGDESPERRLSGTIIGLGSM-PANSTSPWANSDWRSLRVQWDEPSAILRPDRVS 349

Query: 358 IWEIEPVTAPFFICPPPFFRSKHPR 382
            WE+EP+ A     P P  R+K  R
Sbjct: 350 PWELEPLDATNPQPPQPHLRNKRAR 374


>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
 gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
          Length = 672

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/384 (51%), Positives = 257/384 (66%), Gaps = 20/384 (5%)

Query: 8   AGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           A A    G G  G+   +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D
Sbjct: 2   ADAGVARGPGSAGD--ALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLD 59

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP 127
             +P + NLP K+LC ++NV L A+T++DEVYAQ+ LQP      EA      +  +  P
Sbjct: 60  QHLPLF-NLPPKILCKVVNVELRAETDSDEVYAQIMLQP------EAEQNEPTSPDAEPP 112

Query: 128 QTEF-----FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
           + E      FCKTLTASDTSTHGGFSV RR AE+  P LD +  PP QEL+A+DLH N W
Sbjct: 113 EPERCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEW 172

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS 242
            FRHI+RGQP+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ S
Sbjct: 173 HFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPS 232

Query: 243 SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMR 302
           SV+SS SMH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A  ++++S+GMR
Sbjct: 233 SVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEA-KNHKMSVGMR 291

Query: 303 FRMMFETEESGTRRYMGTITGISDLDPVR----WKNSQWRNLQVGWDESTAGEKRNRVSI 358
           F+M FE +ES  RR+ GTI G+  + P      W NS+WR+L+V WDE +A  + +RVS 
Sbjct: 292 FKMRFEGDESPERRFSGTIIGLGSM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSP 350

Query: 359 WEIEPVTAPFFICPPPFFRSKHPR 382
           WE+EP+ A     P P  R+K  R
Sbjct: 351 WELEPLDATNPQPPQPPLRNKRAR 374


>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
          Length = 1673

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 196/376 (52%), Positives = 253/376 (67%), Gaps = 9/376 (2%)

Query: 11  ASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQI 70
           A+N G G G     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D  +
Sbjct: 4   AANPG-GSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYL 62

Query: 71  PNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NKPQT 129
           P + NLPSK+LC ++NV L A+ ++DEVYAQ+ LQP    D+  L   D  L+   K   
Sbjct: 63  PMF-NLPSKILCSVVNVELRAEADSDEVYAQIMLQP--EADQSELTSLDPELQDLEKCTA 119

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH   W FRHI+R
Sbjct: 120 HSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFR 179

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS S
Sbjct: 180 GQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVISSHS 239

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A   N +S+GMRF+M FE 
Sbjct: 240 MHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQN-LSVGMRFKMRFEG 298

Query: 310 EESGTRRYMGTITGISDLDPVR---WKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           +E+  RR+ GTI GI  +  +    W +S W++L+V WDE +A  + +RVS WE+EP+ A
Sbjct: 299 DEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDA 358

Query: 367 PFFICPPPFFRSKHPR 382
                P P  R+K  R
Sbjct: 359 SNPQPPQPPLRNKRAR 374


>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
 gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
          Length = 850

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 188/363 (51%), Positives = 246/363 (67%), Gaps = 8/363 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW+ CAGPLV +P  G  V YFPQGH EQV AS  +  +  +  Y +LP K+LC +
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 85  LNVTLHADTETDEVYAQMTL-----QPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +NV L A+ + DEVYAQ+TL     QP  +   E +  S  A  + +P+   FCKTLTAS
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKQPEENGSSEEMPASPPAALA-RPRVHSFCKTLTAS 156

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSV RR A++  PPLD + QPP QEL+A+DLH   W FRHI+RGQP+RHLL +
Sbjct: 157 DTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQS 216

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+FVS KRL AGD+ +F+R +  +L +G+RRA RQ AN+ SSV+SS SMH+G+LA A 
Sbjct: 217 GWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAW 276

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA    + FTV+Y PR SP+EFVVP  +Y +++  N   +GMRF+M FE EE+  +R+ G
Sbjct: 277 HAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRN-YPIGMRFKMRFEGEEAPEQRFTG 335

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G  D D   W  S+WR L+V WDE+++  +  RVS W+IEP  +P  I P P  R K
Sbjct: 336 TIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPK 395

Query: 380 HPR 382
            PR
Sbjct: 396 RPR 398


>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
          Length = 849

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/362 (51%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW+ CAGPLV +P  G  V YFPQGH EQV AS  +  +  +  Y +LP K+LC +
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 85  LNVTLHADTETDEVYAQMTL----QPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           +NV L A+ + DEVYAQ+TL    +P  +   E +  S  A  + +P+   FCKTLTASD
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALA-RPRVHSFCKTLTASD 156

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSV RR A++  PPLD + QPP QEL+A+DLH   W FRHI+RGQP+RHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGD+ +F+R +  +L +G+RRA RQ AN+ SSV+SS SMH+G+LA A H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWH 276

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           A    + FTV+Y PR SP+EFVVP  +Y +++  N   +GMRF+M FE EE+  +R+ GT
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRN-YPIGMRFKMRFEGEEAPEQRFTGT 335

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKH 380
           I G  D D   W  S+WR L+V WDE+++  +  RVS W+IEP  +P  I P P  R K 
Sbjct: 336 IVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKR 395

Query: 381 PR 382
           PR
Sbjct: 396 PR 397


>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
          Length = 751

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/362 (51%), Positives = 246/362 (67%), Gaps = 7/362 (1%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW+ CAGPLV +P  G  V YFPQGH EQV AS  +  +  +  Y +LP K+LC +
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 85  LNVTLHADTETDEVYAQMTL----QPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           +NV L A+ + DEVYAQ+TL    +P  +   E +  S  A  + +P+   FCKTLTASD
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALA-RPRVHSFCKTLTASD 156

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSV RR A++  PPLD + QPP QEL+A+DLH   W FRHI+RGQP+RHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGD+ +F+R +  +L +G+RRA RQ AN+ SSV+SS SMH+G+LA A H
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHLGVLATAWH 276

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           A    + FTV+Y PR SP+EFVVP  +Y +++  N   +GMRF+M FE EE+  +R+ GT
Sbjct: 277 AVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRN-YPIGMRFKMRFEGEEAPEQRFTGT 335

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKH 380
           I G  D D   W  S+WR L+V WDE+++  +  RVS W+IEP  +P  I P P  R K 
Sbjct: 336 IVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKR 395

Query: 381 PR 382
           PR
Sbjct: 396 PR 397


>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
 gi|238014618|gb|ACR38344.1| unknown [Zea mays]
 gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
          Length = 511

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/384 (51%), Positives = 255/384 (66%), Gaps = 20/384 (5%)

Query: 7   TAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI 66
           +AG A  SG  G      +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +
Sbjct: 3   SAGVAGCSGSAGDA----LFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQL 58

Query: 67  DGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNK 126
           D  +P + +LP K+LC ++NV L A+T++DEVYAQ+ LQP      EA      +  S  
Sbjct: 59  DQHLPLF-DLPPKILCKVVNVELRAETDSDEVYAQIMLQP------EADQSEPTSPDSEP 111

Query: 127 PQTEF-----FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNI 181
           P+ E      FCKTLTASDTSTHGGFSV RR AE+  P LD +  PP QEL+A+DLH N 
Sbjct: 112 PEPERCNVYSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNE 171

Query: 182 WTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLS 241
           W FRHI+RGQP+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ 
Sbjct: 172 WHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMP 231

Query: 242 SSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGM 301
           SSV+SS +MH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A  ++++S+GM
Sbjct: 232 SSVISSHNMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEA-KNHKVSVGM 290

Query: 302 RFRMMFETEESGTRRYMGTITGISDL---DPVRWKNSQWRNLQVGWDESTAGEKRNRVSI 358
           RF+M FE +ES  RR  GTI G+  +       W NS WR+L+V WDE +A  + +RVS 
Sbjct: 291 RFKMRFEGDESPERRLSGTIIGLGSMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSP 350

Query: 359 WEIEPVTAPFFICPPPFFRSKHPR 382
           WE+EP+ A     P P  R+K  R
Sbjct: 351 WELEPLDATNPQPPQPHLRNKRAR 374


>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
 gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
 gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
          Length = 677

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/379 (51%), Positives = 253/379 (66%), Gaps = 12/379 (3%)

Query: 8   AGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           AG A  SG  G      +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D
Sbjct: 4   AGVARGSGSAGDA----LFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLD 59

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP 127
             +P + NLP K+LC ++NV L A+T++DEVYAQ+ LQP  +   E         +  + 
Sbjct: 60  QHLPLF-NLPHKILCKVVNVELRAETDSDEVYAQIMLQPQ-TEQSEPTSPDPEPPEPERC 117

Query: 128 QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHI 187
               FCKTLTASDTSTHGGFSV RR AE+  P LD +  PP QEL+A+DLH N W FRHI
Sbjct: 118 NIHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHI 177

Query: 188 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSS 247
           +RGQP+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS
Sbjct: 178 FRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISS 237

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
            SMH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A  ++++S+GMRF+M F
Sbjct: 238 HSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEA-KNHKMSVGMRFKMRF 296

Query: 308 ETEESGTRRYMGTITGISDLDPVR----WKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           E +ES  RR+ GTI G+  + P      W NS+WR+L+V WDE +A  + +RVS WE+EP
Sbjct: 297 EGDESPERRFSGTIIGMGCM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEP 355

Query: 364 VTAPFFICPPPFFRSKHPR 382
           +       P P  R+K  R
Sbjct: 356 LDRTNPQPPQPPLRNKRAR 374


>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
 gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
          Length = 661

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/367 (51%), Positives = 247/367 (67%), Gaps = 15/367 (4%)

Query: 4   PANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           PA  AG+       GG     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  
Sbjct: 10  PAAAAGS-------GGMPSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTH 62

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           + +D  +P + NLP K+LC ++NV L A+ ++DEVYAQ+ LQP    D+  L   D   +
Sbjct: 63  QQLDQYLPMF-NLPPKILCSVVNVELRAEADSDEVYAQIMLQP--EADQNELTSLDPEPQ 119

Query: 124 S-NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
              K     FCKTLTASDTSTHGGFSV RR AE+  P LD S+ PP QEL+A+DLH   W
Sbjct: 120 EPEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEW 179

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS 242
            FRHI+RGQPKRHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  ++ S
Sbjct: 180 HFRHIFRGQPKRHLLTTGWSVFVSSKRLVAGDAFIFMRGENGELRVGVRRLMRQVNSMPS 239

Query: 243 SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMR 302
           SV+SS SMH+G+LA A+HA +  + F+VFY PR S S+F+V + KY +A    +IS+GMR
Sbjct: 240 SVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEA-KKQKISVGMR 298

Query: 303 FRMMFETEESGTRRYMGTITGISDLDPVR---WKNSQWRNLQVGWDESTAGEKRNRVSIW 359
           F+M FE +E+  RR+ GTI GI  L  +    W +S WR+L+V WDE ++  + +R+S W
Sbjct: 299 FKMRFEGDEAPERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPW 358

Query: 360 EIEPVTA 366
           E+EP+ A
Sbjct: 359 EVEPLDA 365


>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
 gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  371 bits (953), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 175/333 (52%), Positives = 236/333 (70%), Gaps = 3/333 (0%)

Query: 36  PLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ-IPNYPNLPSKLLCILLNVTLHADTE 94
           PLV +P  G  V YFPQGH EQV AS  +  D Q +P Y NL  K+LC ++NV L A+ +
Sbjct: 4   PLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAY-NLSPKILCRVVNVQLKAELD 62

Query: 95  TDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAA 154
           TDEV+AQ+ L P    D E +   DL     +P+   FCK LTASDTSTHGGFSV +R A
Sbjct: 63  TDEVFAQVILLPETQQDVELVEEEDLPPLPARPRVHSFCKMLTASDTSTHGGFSVLKRHA 122

Query: 155 EKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGD 214
           ++  PPLD S+QPP QEL+A+DLH N W FRHI+RGQP+RHLL +GWSLFVS K+L AGD
Sbjct: 123 DECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLVAGD 182

Query: 215 SVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNP 274
           + +F+R E ++L +G+RRA RQP+ + SS++SS SMHIGILA A HA +  S FTV+Y P
Sbjct: 183 AFIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTGSMFTVYYKP 242

Query: 275 RASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKN 334
           R SP+EF++P+ KY ++V  N  ++GMRF+M FE +++  +R+ GT+ G+ + DP +W  
Sbjct: 243 RTSPAEFIIPVDKYMESVKIN-YAIGMRFKMRFEADDAPEQRFSGTVIGVEEADPKKWPR 301

Query: 335 SQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           S WR L+V WDE++   + +RVS W++EP  AP
Sbjct: 302 SNWRCLKVHWDETSPVHRPDRVSPWKVEPALAP 334


>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
          Length = 638

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 190/355 (53%), Positives = 244/355 (68%), Gaps = 14/355 (3%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ-VAASMKKDIDGQIPNYPNLPSKLLC 82
           +I   LWHACAGPL +LP  G  VVYFPQGH EQ + AS   +   QIP+  +LP ++ C
Sbjct: 18  SICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPS-XHLPPQVFC 76

Query: 83  ILLNVTLHADTETDEVYAQMTL------QPVPSYDREALLRSDLALKS-NKPQTEFFCKT 135
            +LNV LHA+ ETDEVYAQ+TL      +       ++L+  +  +   +K     FCKT
Sbjct: 77  RVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTPHMFCKT 136

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP+RH
Sbjct: 137 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRH 196

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL--SSSVLSSD-SMHI 252
           LLTTGWSLFV+ + L +GD+VLF+R +  +L LGIRRA+  P ++  + SVLS      +
Sbjct: 197 LLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRAS-HPRSIIPTHSVLSGQWGSQL 255

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
            +L+AAA+A ++ S F +FYNPRASPSEFV+P  KY + + +  + +GMRF+M FE E++
Sbjct: 256 SVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCI-NRPVCVGMRFKMRFEMEDA 314

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
             RR  G ITGI D+DP+RW +S+WR L V WDE    E R RVS WEIEP   P
Sbjct: 315 AERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLP 369


>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
          Length = 832

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 185/373 (49%), Positives = 239/373 (64%), Gaps = 12/373 (3%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           G G K  +  ELW ACAGPL  +P  G  V Y PQGH EQV AS  +  + Q     NLP
Sbjct: 16  GCGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLP 75

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQ 128
            K+ C L+N+ L  + +TDEVYAQ+TL P    D       +         L   +  P 
Sbjct: 76  WKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPH 135

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+
Sbjct: 136 IHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIF 195

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA R    + SSV+SS 
Sbjct: 196 RGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSH 255

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           +MH+G+LA A HA   +S FTV+Y PR SP+EFVV   +YY+++  N  S+GMRF+M FE
Sbjct: 256 NMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRN-YSIGMRFKMRFE 314

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P 
Sbjct: 315 GEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPC 374

Query: 369 FICPPP--FFRSK 379
            + P P  F RS+
Sbjct: 375 HVNPLPVRFKRSR 387


>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
          Length = 748

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 190/355 (53%), Positives = 244/355 (68%), Gaps = 14/355 (3%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ-VAASMKKDIDGQIPNYPNLPSKLLC 82
           +I   LWHACAGPL +LP  G  VVYFPQGH EQ + AS   +   QIP+  +LP ++ C
Sbjct: 18  SICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPS-XHLPPQVFC 76

Query: 83  ILLNVTLHADTETDEVYAQMTL------QPVPSYDREALLRSDLALKS-NKPQTEFFCKT 135
            +LNV LHA+ ETDEVYAQ+TL      +       ++L+  +  +   +K     FCKT
Sbjct: 77  RVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTPHMFCKT 136

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP+RH
Sbjct: 137 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRH 196

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL--SSSVLSSD-SMHI 252
           LLTTGWSLFV+ + L +GD+VLF+R +  +L LGIRRA+  P ++  + SVLS      +
Sbjct: 197 LLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRAS-HPRSIIPTHSVLSGQWGSQL 255

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
            +L+AAA+A ++ S F +FYNPRASPSEFV+P  KY + + +  + +GMRF+M FE E++
Sbjct: 256 SVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCI-NRPVCVGMRFKMRFEMEDA 314

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
             RR  G ITGI D+DP+RW +S+WR L V WDE    E R RVS WEIEP   P
Sbjct: 315 AERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLP 369


>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 707

 Score =  369 bits (947), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 184/371 (49%), Positives = 238/371 (64%), Gaps = 12/371 (3%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  ELW ACAGPL  +P  G  V Y PQGH EQV AS  +  + Q     NLP K
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQTE 130
           + C L+N+ L  + +TDEVYAQ+TL P    D       +         L   +  P   
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA R    + SSV+SS +M
Sbjct: 196 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNM 255

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           H+G+LA A HA   +S FTV+Y PR SP+EFVV   +YY+++  N  S+GMRF+M FE E
Sbjct: 256 HLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRN-YSIGMRFKMRFEGE 314

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P  +
Sbjct: 315 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHV 374

Query: 371 CPPP--FFRSK 379
            P P  F RS+
Sbjct: 375 NPLPVRFKRSR 385


>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
 gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
          Length = 839

 Score =  369 bits (947), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 185/371 (49%), Positives = 240/371 (64%), Gaps = 14/371 (3%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  ELW ACAGPL ++P  G  V YFPQGH EQV AS  +  + Q     NLP K+ 
Sbjct: 24  KDPLFVELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIP 83

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK-----------SNKPQTE 130
           C L+N+ L A+ +TDEVYAQ+TL P    D       +               +  P+  
Sbjct: 84  CKLMNIELKAEPDTDEVYAQLTLLPDKKQDENTSTTVENEEAEEEVVPHAPPTNEGPRIH 143

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RG
Sbjct: 144 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRG 203

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA R    + SSV+SS SM
Sbjct: 204 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 263

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           H+G+LA A HA    S FTV+Y PR SP+EFVV   +YY+++  N  S+GMRF+M FE E
Sbjct: 264 HLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESLKRN-YSIGMRFKMRFEGE 322

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI   DP  W +S+WR+L+V WDE+++  +  RVS W+IEP  +P  +
Sbjct: 323 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAISPSPV 382

Query: 371 CPPP--FFRSK 379
            P P  F RS+
Sbjct: 383 NPLPVRFKRSR 393


>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
          Length = 830

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 184/371 (49%), Positives = 238/371 (64%), Gaps = 12/371 (3%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  ELW ACAGPL  +P  G  V Y PQGH EQV AS  +  + Q     NLP K
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQTE 130
           + C L+N+ L  + +TDEVYAQ+TL P    D       +         L   +  P   
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA R    + SSV+SS +M
Sbjct: 196 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNM 255

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           H+G+LA A HA   +S FTV+Y PR SP+EFVV   +YY+++  N  S+GMRF+M FE E
Sbjct: 256 HLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRN-YSIGMRFKMRFEGE 314

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P  +
Sbjct: 315 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHV 374

Query: 371 CPPP--FFRSK 379
            P P  F RS+
Sbjct: 375 NPLPVRFKRSR 385


>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
          Length = 826

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 187/372 (50%), Positives = 239/372 (64%), Gaps = 15/372 (4%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  ELW ACAGPL ++P  G  V YFPQGH EQV AS     + Q     NLP K+ 
Sbjct: 25  KDALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIP 84

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK------------SNKPQT 129
           C L+N+ L A+ +TDEVYAQ+TL P    D     R +                S   + 
Sbjct: 85  CKLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRI 144

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+R
Sbjct: 145 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFR 204

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA R    + SSV+SS S
Sbjct: 205 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHS 264

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A HA    S FTV+Y PR SP+EFVV  A+Y +++  N  S+GMRFRM FE 
Sbjct: 265 MHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRN-YSIGMRFRMRFEG 323

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF 369
           EE+  +R+ GTI GI   DP  W +S+WR+L+V WDE+++  +  RVS W+IEP  +P  
Sbjct: 324 EEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSP 383

Query: 370 ICPPP--FFRSK 379
           + P P  F RS+
Sbjct: 384 VNPLPVRFKRSR 395


>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
 gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
          Length = 657

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 190/379 (50%), Positives = 253/379 (66%), Gaps = 13/379 (3%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK-KDID 67
           GAA+    G G     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS   + +D
Sbjct: 7   GAAA----GPGMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLD 62

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP 127
             +P + +LP K+LC ++NV L A+ ++DEVYAQ+ LQP    D+  L   D   +  + 
Sbjct: 63  QYLPMF-DLPPKILCRVVNVELRAEADSDEVYAQIMLQP--EADQNELTSLDAEPQEREK 119

Query: 128 QTEF-FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
            T   FCKTLTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH   W FRH
Sbjct: 120 CTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRH 179

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQPKRHLLTTGWS+FVS KRL +GD+ +F+R E  +L +G+RR  RQ  ++ SSV+S
Sbjct: 180 IFRGQPKRHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVIS 239

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMH+G+LA A+HA +  + F+VFY PR S S+F+V + KY +A    +IS+GMRF+M 
Sbjct: 240 SHSMHLGVLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEA-KKQKISVGMRFKMR 298

Query: 307 FETEESGTRRYMGTITGISDLDPVR---WKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           FE +++  RR+ GTI GI  L  +    W +S WR+L+V WDE ++  + +R+S WE+EP
Sbjct: 299 FEGDDAPERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEP 358

Query: 364 VTAPFFICPPPFFRSKHPR 382
           + A     P P  R+K PR
Sbjct: 359 LDAANPQSPQPPLRAKRPR 377


>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
 gi|224028731|gb|ACN33441.1| unknown [Zea mays]
 gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
 gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
          Length = 813

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 187/372 (50%), Positives = 239/372 (64%), Gaps = 15/372 (4%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  ELW ACAGPL ++P  G  V YFPQGH EQV AS     + Q     NLP K+ 
Sbjct: 25  KDALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIP 84

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK------------SNKPQT 129
           C L+N+ L A+ +TDEVYAQ+TL P    D     R +                S   + 
Sbjct: 85  CKLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRI 144

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+R
Sbjct: 145 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFR 204

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA R    + SSV+SS S
Sbjct: 205 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHS 264

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A HA    S FTV+Y PR SP+EFVV  A+Y +++  N  S+GMRFRM FE 
Sbjct: 265 MHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRN-YSIGMRFRMRFEG 323

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF 369
           EE+  +R+ GTI GI   DP  W +S+WR+L+V WDE+++  +  RVS W+IEP  +P  
Sbjct: 324 EEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSP 383

Query: 370 ICPPP--FFRSK 379
           + P P  F RS+
Sbjct: 384 VNPLPVRFKRSR 395


>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
          Length = 840

 Score =  368 bits (945), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 193/384 (50%), Positives = 244/384 (63%), Gaps = 25/384 (6%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G A  + EG  G   T+  E+W ACAG L++LP  G+ VVYF QGH EQ  AS     DG
Sbjct: 13  GHAPRAEEGAAG---TVCLEVWQACAGSLISLPRKGSVVVYFXQGHLEQAGAS----CDG 65

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREAL--------LRSDL 120
                  LP ++ C ++NV LHAD  +DEVYAQ++L P+P    + L           + 
Sbjct: 66  W-----GLPPQVFCRVINVNLHADQVSDEVYAQVSLTPIPEPVEKGLPEEEVREDGEEEF 120

Query: 121 ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
              S       FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH  
Sbjct: 121 EFVSRSATPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGF 180

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPAN 239
            W FRHIYRGQP+RHLLTTGWS+FV+ K+L AGD+VLF+R E  +L LGIRRA R +  +
Sbjct: 181 EWKFRHIYRGQPRRHLLTTGWSVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGS 240

Query: 240 LSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISL 299
           + S  L S ++     AA + A +  S F V YNPRASP+EF+VP  KYYK  +  Q SL
Sbjct: 241 VPSLALLSQNLSGSTFAAVSKAVSTKSVFHVSYNPRASPAEFIVPYWKYYKNFN-QQFSL 299

Query: 300 GMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIW 359
           GMRF+M  ETE++  RR  G I+G+ D+DPVRW  S+WR L V WDE +  ++ +RVS W
Sbjct: 300 GMRFKMKIETEDTAERRCTGLISGVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPW 359

Query: 360 EIEPV-TAPFFICPPPFFRSKHPR 382
           EI+ + + P F   PP    K PR
Sbjct: 360 EIDLLGSVPVF--SPPATGLKRPR 381


>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
          Length = 813

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 187/372 (50%), Positives = 239/372 (64%), Gaps = 15/372 (4%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  ELW ACAGPL ++P  G  V YFPQGH EQV AS     + Q     NLP K+ 
Sbjct: 25  KDALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIP 84

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK------------SNKPQT 129
           C L+N+ L A+ +TDEVYAQ+TL P    D     R +                S   + 
Sbjct: 85  CKLMNMELKAEPDTDEVYAQLTLLPDKKQDENTSARVENEEAEEEVVPHVPPATSEGLRI 144

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+R
Sbjct: 145 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFR 204

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA R    + SSV+SS S
Sbjct: 205 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHS 264

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A HA    S FTV+Y PR SP+EFVV  A+Y +++  N  S+GMRFRM FE 
Sbjct: 265 MHLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRN-YSIGMRFRMRFEG 323

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF 369
           EE+  +R+ GTI GI   DP  W +S+WR+L+V WDE+++  +  RVS W+IEP  +P  
Sbjct: 324 EEAAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSP 383

Query: 370 ICPPP--FFRSK 379
           + P P  F RS+
Sbjct: 384 VNPLPVRFKRSR 395


>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
          Length = 682

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 185/370 (50%), Positives = 248/370 (67%), Gaps = 12/370 (3%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           G GGE   +  ELW ACAGPLV++P  G  V YFPQGH EQ+ AS  +++  +IP + NL
Sbjct: 4   GFGGEGDDLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLF-NL 62

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD--LALKSNKPQTEFFCK 134
           PSK+LC ++++ L A+ ETDEVYAQ+TL P P    +A  RS      +  +P    FCK
Sbjct: 63  PSKILCRVIHIQLRAEQETDEVYAQITLLPEPD---QAEPRSPDPCTPEPPRPTVHSFCK 119

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
            LTASDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH   W F+HI+RGQP+R
Sbjct: 120 VLTASDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRR 179

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ KRL AGDS +F+R +  +L +G+RR  RQ + + +SV+SS SMH+G+
Sbjct: 180 HLLTTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGV 239

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LA A+HA A  + F V+Y PR   S+F++ L KY +AV SN  ++GMRF+M FE E+S  
Sbjct: 240 LATASHAVATQTLFIVYYKPRT--SQFIIGLNKYLEAV-SNGFAVGMRFKMRFEGEDSPE 296

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV--TAPFFICP 372
           RR+ GTI G  D  P  WK+S+WR+L+V WDE  +  +  +VS WEIE    + P  + P
Sbjct: 297 RRFSGTIVGGEDFSP-EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAP 355

Query: 373 PPFFRSKHPR 382
           P   ++K PR
Sbjct: 356 PGVLKNKRPR 365


>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
          Length = 693

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 185/370 (50%), Positives = 248/370 (67%), Gaps = 12/370 (3%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           G GGE   +  ELW ACAGPLV++P  G  V YFPQGH EQ+ AS  +++  +IP + NL
Sbjct: 4   GFGGEGDDLYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLF-NL 62

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD--LALKSNKPQTEFFCK 134
           PSK+LC ++++ L A+ ETDEVYAQ+TL P P    +A  RS      +  +P    FCK
Sbjct: 63  PSKILCRVIHIQLRAEQETDEVYAQITLLPEPD---QAEPRSPDPCTPEPPRPTVHSFCK 119

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
            LTASDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH   W F+HI+RGQP+R
Sbjct: 120 VLTASDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRR 179

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ KRL AGDS +F+R +  +L +G+RR  RQ + + +SV+SS SMH+G+
Sbjct: 180 HLLTTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQSMHLGV 239

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LA A+HA A  + F V+Y PR   S+F++ L KY +AV SN  ++GMRF+M FE E+S  
Sbjct: 240 LATASHAVATQTLFIVYYKPRT--SQFIIGLNKYLEAV-SNGFAVGMRFKMRFEGEDSPE 296

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV--TAPFFICP 372
           RR+ GTI G  D  P  WK+S+WR+L+V WDE  +  +  +VS WEIE    + P  + P
Sbjct: 297 RRFSGTIVGGEDFSP-EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQGLAP 355

Query: 373 PPFFRSKHPR 382
           P   ++K PR
Sbjct: 356 PGVLKNKRPR 365


>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
 gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
          Length = 730

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 182/353 (51%), Positives = 231/353 (65%), Gaps = 27/353 (7%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP----NLPSK 79
           ++  ELWHACAGPL++LP  G+ VVYFPQGH EQ            +P+ P    +LPS 
Sbjct: 49  SVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQ------------LPDLPLAVYDLPSY 96

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE--------- 130
           + C +++V LHA+T  DEVYAQ++L P      + L +  L     +   E         
Sbjct: 97  IFCRVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKSTTTH 156

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRG
Sbjct: 157 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHIYRG 216

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LGIRRA +     S   L S  +
Sbjct: 217 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCSQQL 276

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           +   L    HA +  S F + YNPRAS SEF++PL K+ K++  +  S+GMRF+M FETE
Sbjct: 277 NQSTLTDVVHAMSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYS-FSVGMRFKMRFETE 335

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           ++  RRYMG ITGISDLDP RW  S+WR L V WD+     + +RVS WEIEP
Sbjct: 336 DAAERRYMGLITGISDLDPARWPGSKWRCLVVRWDDMET-NRHSRVSPWEIEP 387


>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
          Length = 693

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 181/358 (50%), Positives = 244/358 (68%), Gaps = 7/358 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL+ +P  G  V YFPQGH EQ+ AS  + +D  +P + NLPSK+LC ++NV
Sbjct: 74  ELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMF-NLPSKILCSVVNV 132

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L  + ++DEVYAQ+ LQP    ++  L  +    +  +     FCKTLTASDTSTHGGF
Sbjct: 133 ELRTEADSDEVYAQIMLQP--QDEQSELTSAGPPQELERGTIHSFCKTLTASDTSTHGGF 190

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV RR AE+  P LD S  PP QEL+A+DLH   W FRHI+RGQP+RHLLTTGWS+FVS 
Sbjct: 191 SVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGWSVFVSS 250

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGD+ +F+R    +L +G+RR  RQ  N+ SSV+SS SMH+G+LA A+HA +  + 
Sbjct: 251 KRLVAGDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHLGVLATASHAISTGTL 310

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD- 326
           F+VFY PR S SEFVV + KY +A   N +S+GMRF+M FE +E+  RR+ GTI G+   
Sbjct: 311 FSVFYKPRTSRSEFVVSVNKYLEAKKQN-MSVGMRFKMKFEGDEALERRFSGTIVGMGST 369

Query: 327 --LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
             +   +W +S W++L+V WDE ++  + +RVS+WE+EP+ +     P P  R+K  R
Sbjct: 370 PTMPSSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEPLDSANPQTPEPPLRNKRAR 427


>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
          Length = 362

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 178/340 (52%), Positives = 229/340 (67%), Gaps = 7/340 (2%)

Query: 27  TELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLN 86
            ELW ACAGPL  +PA G  V YFPQGH EQV AS  +  + Q     NLP K+ C ++N
Sbjct: 24  VELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKVMN 83

Query: 87  VTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP------QTEFFCKTLTASD 140
           V L A+ +TDEVYAQ+TL P    D       +  +    P      +   FCKTLTASD
Sbjct: 84  VELKAEQDTDEVYAQLTLLPEKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKTLTASD 143

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RGQP+RHLL +G
Sbjct: 144 TSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRHLLQSG 203

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ AN+ SSV+SS SMH+G+LA A H
Sbjct: 204 WSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHSMHLGVLATAWH 263

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
            A   + FTV+Y PR SP+EFVVP   + +++  N  S+GMRF+M FE EE+  +R+ GT
Sbjct: 264 VANTGTMFTVYYKPRTSPAEFVVPRDWFDESLKRNH-SIGMRFKMRFEGEEAAEQRFTGT 322

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           I GI D DP  W +S+WR+L+V WDE+++  +  RVS W+
Sbjct: 323 IVGIGDSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362


>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
 gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
          Length = 676

 Score =  362 bits (930), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 191/379 (50%), Positives = 250/379 (65%), Gaps = 13/379 (3%)

Query: 8   AGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDID 67
           AG A  SG  G      +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS  + +D
Sbjct: 4   AGVARGSGSAGDA----LFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLD 59

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP 127
             +P + NLP K+LC ++NV L A+T++DEVYAQ+ LQP  +   E         +  + 
Sbjct: 60  QHLPLF-NLPHKILCKVVNVELRAETDSDEVYAQIMLQP-QTEQSEPTSPDPEPPEPERC 117

Query: 128 QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHI 187
               FCKTLTASDTSTH G SV RR AE+  P LD +  PP QEL+A+DLH N W FRHI
Sbjct: 118 NIHSFCKTLTASDTSTH-GLSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHI 176

Query: 188 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSS 247
           +RGQP+RHLLTTGWS+FVS KRL AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS
Sbjct: 177 FRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISS 236

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
            SMH+G+LA A+HA +  + F+VFY PR S SEFVV + KY +A  ++++S+GMRF+M F
Sbjct: 237 HSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEA-KNHKMSVGMRFKMRF 295

Query: 308 ETEESGTRRYMGTITGISDLDPVR----WKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           E +ES  RR+ G I G+  + P      W NS+WR+L+V WDE +A  + +RVS WE+EP
Sbjct: 296 EGDESPERRFSGIIIGMGCM-PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEP 354

Query: 364 VTAPFFICPPPFFRSKHPR 382
           +       P P  R+K  R
Sbjct: 355 LNRTNPQPPQPPLRNKRAR 373


>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  362 bits (930), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 190/382 (49%), Positives = 250/382 (65%), Gaps = 14/382 (3%)

Query: 10  AASNSGEGG---GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI 66
           A  N+  GG   G E   + TELW ACAGPLV++P     V YFPQGH EQ+ AS  + +
Sbjct: 2   AHGNNIRGGLEPGLESDHLFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGV 61

Query: 67  DGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNK 126
           D +IP + NLPSK+LC +++  L A+ ETDEVYAQ+TLQP    D+      D       
Sbjct: 62  DQRIPLF-NLPSKILCRVVHTRLLAEQETDEVYAQITLQP--EADQTEPKSPDSCPDEAP 118

Query: 127 PQT-EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
            QT   FCK LTASDTSTHGGFSV R+ A +  PPLD S   P QEL+ARDLH   W F+
Sbjct: 119 KQTVHSFCKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFK 178

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL 245
           HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R +  +L +G+RR  RQ + + SSV+
Sbjct: 179 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVI 238

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
           SS SMH+G+LA A+HA    + F V+Y PR   S+F++ L KY +AV+    ++GMRF+M
Sbjct: 239 SSQSMHLGVLATASHAVTTQTLFVVYYKPRT--SQFIISLNKYLEAVNYG-FAVGMRFKM 295

Query: 306 MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP-- 363
            FE E+S  RR+ GTI GI D+ P +W NS+WR+L++ WDE    ++  RVS W+IEP  
Sbjct: 296 RFEGEDSPERRFTGTIVGIGDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFV 354

Query: 364 VTAPFFICPPPFFRSKHPRQAD 385
            +A   +  PP  + K PR  D
Sbjct: 355 ASASLNLTQPP-VKIKRPRPLD 375


>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
          Length = 629

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 178/362 (49%), Positives = 241/362 (66%), Gaps = 15/362 (4%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP--NLPSKLLCILL 85
           ELW  CAGP+V++P A   V YFPQGH EQ+ AS ++D++   P  P  +LP K+LC ++
Sbjct: 10  ELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTKPLFDLPPKILCRVM 69

Query: 86  NVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHG 145
           +V L A+ +TDEVYAQ+ L P  + D E +       +S +P+   F K LTASDTSTHG
Sbjct: 70  DVRLQAEKDTDEVYAQIMLMPEGTVD-EPMSPDPSPPESQRPKVHSFSKVLTASDTSTHG 128

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSV R+ A +  PPLD + Q P QEL+A D+H   W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 129 GFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWSTFV 188

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           + KRL AGD+ +F+R E  +L +G+RRANRQ  N+ SSV+SS SMH+G+LA A HA    
Sbjct: 189 TAKRLVAGDTFVFLRGENGELRVGVRRANRQQTNMPSSVISSHSMHLGVLATACHATQTR 248

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           S FTV+Y PR   S+F++ L KY +A+ SN+ S+G+RF+M FE E+S  RR+ GT+ G+ 
Sbjct: 249 SMFTVYYKPRT--SQFIISLNKYLEAM-SNKFSVGIRFKMRFEGEDSPERRFSGTVVGVK 305

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT----APFFICPPPFFRSKHP 381
           D     WK+S WR L+V WDE  +  + ++VS WEIEP       P  + P    ++K P
Sbjct: 306 DCS-THWKDSNWRCLEVHWDEPASISRPDKVSPWEIEPFVTSENVPHSVMP----KNKRP 360

Query: 382 RQ 383
           R 
Sbjct: 361 RH 362


>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
          Length = 672

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 181/340 (53%), Positives = 242/340 (71%), Gaps = 5/340 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV LP  G  V YFPQGH EQ+ ASM + ++ Q+P++ +LPSK+LC + +V
Sbjct: 22  ELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSF-DLPSKILCKVASV 80

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NKPQTEFFCKTLTASDTSTHGG 146
              A+ +TDEVYAQ+TL  VP  D+  ++  D  L+   +     FCKTLTASDTSTHGG
Sbjct: 81  QRKAEPDTDEVYAQITL--VPEVDQSEVMSPDDPLQEPERCIVHSFCKTLTASDTSTHGG 138

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           FSV RR A+   PPLD + QPP QEL+A DLH N W FRHI RGQP+RHLLTTGWS+FVS
Sbjct: 139 FSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRHLLTTGWSVFVS 198

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            K+L AGD+++F+R     L +G+RR  RQ AN+ SSV+SS S+ +G+LA A++A +  S
Sbjct: 199 SKKLVAGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILGVLATASYALSTRS 258

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            F++FY PR S SEF+V + KY +A  S+++S+GMRF+M FE EE   RR+ GTI G+  
Sbjct: 259 MFSIFYKPRTSLSEFIVSVNKYLEA-RSHKLSVGMRFKMRFEGEEVPERRFSGTIVGVEA 317

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
                W +S+WR+L+V WDE ++  + +RVS WE+EP+ A
Sbjct: 318 DKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVA 357


>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
 gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
          Length = 694

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 188/381 (49%), Positives = 255/381 (66%), Gaps = 10/381 (2%)

Query: 5   ANTAGAAS-NSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK 63
           AN  G+ S  + EG  G+   + TELW ACAGPLV++P  G  V YFPQGH EQ+ AS  
Sbjct: 3   ANRVGSFSQGNSEGSCGDD--LYTELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTN 60

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
           ++++ ++P + NLPSK+LC ++N+ L A+ +TDEVYAQ+TL P              A  
Sbjct: 61  QELNQRVPLF-NLPSKILCRVINIHLLAEQDTDEVYAQITLLPESDQTEPTSPDPSPAEP 119

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           S +P    FCK LTASDTSTHGGFSV R+ A +  P LD +   P QEL+A+DLH   W 
Sbjct: 120 SRRPAVHSFCKVLTASDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWR 179

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           F+HI+RGQP+RHLLTTGWS FV+ KRL AGDS +F+R E  +L +G+RR  RQ +++ SS
Sbjct: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSS 239

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           V+SS SMH+G+LA A+HA A  + F V+Y PR   S+F++ L KY +A++ N+ S+GMRF
Sbjct: 240 VISSQSMHLGVLATASHAVATQTLFVVYYKPRT--SQFIISLNKYLEAIN-NKFSVGMRF 296

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE E+S  RR+ GTI G+ D  P  W +S+WR L+V WDE  +  + ++VS WEIEP
Sbjct: 297 KMRFEGEDSPERRFSGTIVGVEDFSP-HWLDSKWRQLKVQWDEPASIPRPDKVSPWEIEP 355

Query: 364 --VTAPFFICPPPFFRSKHPR 382
              +AP  I  P   ++K PR
Sbjct: 356 FSASAPSNISQPVPLKNKRPR 376


>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 709

 Score =  358 bits (920), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 180/355 (50%), Positives = 229/355 (64%), Gaps = 21/355 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G   T+  ELWHACAGPL++LP  G+ VVYFPQGH EQ         D  +P   N+PS 
Sbjct: 20  GSSSTVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQHLH------DFPLPASANIPSH 73

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQP----VPSYDREALLRSD-------LALKSNKPQ 128
           + C +L+V LHA+  +DEV+ Q+ L P    V    RE    +D         +KS  P 
Sbjct: 74  VFCRVLDVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADGEEEDAEAVMKSTTPH 133

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIY
Sbjct: 134 --MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIY 191

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R E  +L LGIRRA +  +  + S LS  
Sbjct: 192 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQ 251

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            +    L    +A +    F++ YNPR S SEF++P+ ++ K++     S GMRFRM FE
Sbjct: 252 QLSPTSLMDVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSL-DYSYSAGMRFRMRFE 310

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           TE++  RR+ G I GI+D+DPVRW  S+WR L V WD+     + NRVS WEIEP
Sbjct: 311 TEDAAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDDLEV-TRHNRVSPWEIEP 364


>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 764

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 182/366 (49%), Positives = 245/366 (66%), Gaps = 11/366 (3%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + ++++LW ACAGPLV++P     V YFPQGH EQ+ AS  + +D +IP + NLPSK+LC
Sbjct: 81  EAVSSQLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLF-NLPSKILC 139

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-EFFCKTLTASDT 141
            +++  L A+ ETDEVYAQ+TLQP    D+      D        QT   FCK LTASDT
Sbjct: 140 RVVHTRLLAEQETDEVYAQITLQP--EADQTEPKSPDSCPDEAPKQTVHSFCKILTASDT 197

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSV R+ A +  PPLD S   P QEL+ARDLH   W F+HI+RGQP+RHLLTTGW
Sbjct: 198 STHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGW 257

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           S FV+ KRL AGD+ +F+R +  +L +G+RR  RQ + + SSV+SS SMH+G+LA A+HA
Sbjct: 258 STFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHA 317

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
               + F V+Y PR   S+F++ L KY +AV+    ++GMRF+M FE E+S  RR+ GTI
Sbjct: 318 VTTQTLFVVYYKPRT--SQFIISLNKYLEAVNYG-FAVGMRFKMRFEGEDSPERRFTGTI 374

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP--VTAPFFICPPPFFRSK 379
            GI D+ P +W NS+WR+L++ WDE    ++  RVS W+IEP   +A   +  PP  + K
Sbjct: 375 VGIGDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQPP-VKIK 432

Query: 380 HPRQAD 385
            PR  D
Sbjct: 433 RPRPLD 438


>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
          Length = 1067

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 167/222 (75%), Positives = 189/222 (85%), Gaps = 10/222 (4%)

Query: 20  GEKKT--INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV------AASMKKDIDGQIP 71
           GE+K   IN+ELWHACAGPLV+LP  G+ VVYFPQGHSEQV      AASM+KD+D  +P
Sbjct: 34  GERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVP 93

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
           +YPNLPSKL+C+L  V LHAD +TDEVYAQMTLQPV +Y +EAL  S+LALK  +PQ EF
Sbjct: 94  SYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKQARPQMEF 153

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL ARD+HDN+WTFRHIYRGQ
Sbjct: 154 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQ 213

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRD--EKQQLLLGIR 231
           PKRHLLTTGWSLFVSGKRLFAGDSV+ +R   +  Q+ LG+R
Sbjct: 214 PKRHLLTTGWSLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/276 (51%), Positives = 178/276 (64%), Gaps = 30/276 (10%)

Query: 290 KAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
           +   SNQISLGMRFRMMFETEE GTRRYMGTITGISDLDPV            GWDES A
Sbjct: 243 RHCDSNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPV------------GWDESAA 290

Query: 350 GEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVK 409
           GE+RNRVSIWEIEPV APFF+CP PFF  K PRQ DD+ S+++N+FKR MPW+G++  +K
Sbjct: 291 GERRNRVSIWEIEPVAAPFFLCPQPFFGVKRPRQLDDE-SEMENLFKRAMPWLGEEVCIK 349

Query: 410 DSQ----SLPGLSLVQWMNM--QQNPSLAN-AMQSSYMHSLPGSILQNLNGGL------- 455
           D+Q    + PGLSLVQWMNM  QQ+ SLAN A QS Y+ +L    +QNL           
Sbjct: 350 DTQNQNSTAPGLSLVQWMNMNRQQSSSLANTAAQSEYLQALGNPAMQNLAADELARQLYV 409

Query: 456 -SQMPQQNNLQYTGQSLPQQVPQIDQLAKLPSTVNPLGSNILPQQPLGDISQQSRQNMIT 514
            + + QQN +Q+    LPQQ+  ++ L+K    +N LG+ I PQ    D     RQ    
Sbjct: 410 QNNLLQQNCIQFNSPKLPQQMQTMNDLSKAAIPLNQLGAIINPQDQKQDAVNHQRQQNSI 469

Query: 515 QNLPSGPVQAQVLQPQNLVQTSNILQQQPS-IQNPQ 549
           Q +P    Q+ ++Q Q +VQ + + QQ+PS  QNPQ
Sbjct: 470 QVIPLSQAQSNLVQAQVIVQ-NQMQQQKPSPTQNPQ 504


>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 714

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 180/351 (51%), Positives = 229/351 (65%), Gaps = 21/351 (5%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           T+  ELWHACAGP+++LP  G+ VVYFPQGH EQ         D  +P   N+PS + C 
Sbjct: 29  TVCLELWHACAGPMISLPKKGSVVVYFPQGHLEQHLH------DFPLPASANIPSHVFCR 82

Query: 84  LLNVTLHADTETDEVYAQMTLQP----VPSYDREALLRSD-------LALKSNKPQTEFF 132
           +L+V LHA+  +DEVY Q+ L P    V    RE    +D         +KS  P    F
Sbjct: 83  VLDVKLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADGEEEDAEAVMKSTTPH--MF 140

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
           CKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP
Sbjct: 141 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQP 200

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
           +RHLLTTGWS FV+ K+L +GD+VLF+R E  +L LGIRRA +  +  + S LS      
Sbjct: 201 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQGSP 260

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
             L    +A +    F++ YNPR S SEF++P+ ++ K++  +  S GMRFRM FETE++
Sbjct: 261 TSLMDVVNALSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYS-YSAGMRFRMRFETEDA 319

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
             RR+ G I GI+D+DPVRW  S+WR L V WD+  A  + NRVS WEIEP
Sbjct: 320 AERRFTGLIVGIADVDPVRWPGSRWRCLMVRWDDLEA-TRHNRVSPWEIEP 369


>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 791

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 190/366 (51%), Positives = 235/366 (64%), Gaps = 19/366 (5%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL +LP  G  VVYFPQGH EQVA S       +IP Y +L  ++ C ++NV
Sbjct: 53  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SFSPFTPLEIPTY-DLQPQIFCRVVNV 110

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS----------NKPQTEFFCKTLT 137
            L A+ E DEVY Q+TL P    +   L   +L               K     FCKTLT
Sbjct: 111 QLLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKSTPHMFCKTLT 170

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLHD  W FRHIYRGQP+RHLL
Sbjct: 171 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPRRHLL 230

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R   +L  SV+ S + +  +L++
Sbjct: 231 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYPNVLSS 290

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            A+A +  S F VFY+PRAS ++FVVP  KY K++  N +S+G RF+M FE +ES  RR 
Sbjct: 291 VANAISTKSKFHVFYSPRASQADFVVPYQKYVKSI-KNPVSIGTRFKMRFEMDESQERRC 349

Query: 318 M-GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFF 376
             G + G SDLDP RW  S+WR L V WDE      ++RVS WEI+P +AP     PP  
Sbjct: 350 CSGMLIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDP-SAPL----PPLS 404

Query: 377 RSKHPR 382
               PR
Sbjct: 405 IQSSPR 410


>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 693

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 179/358 (50%), Positives = 237/358 (66%), Gaps = 19/358 (5%)

Query: 13  NSGEGGGG-EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           N GE   G E + +  ELW ACAGPLV +P  G  V YFPQGH EQ+  S  ++++ QIP
Sbjct: 7   NPGESRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIP 66

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVP------SYDREALLRSDLALKSN 125
           ++ +LP K+LC ++N+ L A+ ETDEVYAQ+TL P        S D E   R+   + S 
Sbjct: 67  HF-DLPPKILCRVVNIRLLAEKETDEVYAQITLYPEADQSEPQSADPEPPERTRQTVHS- 124

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
                 FCK LTASDTSTHGGFSV R+ A +  PPLD S   P QEL A+DLH   W F+
Sbjct: 125 ------FCKILTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFK 178

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL 245
           HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R +  +L +G+RR  RQ + + SSV+
Sbjct: 179 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVI 238

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
           SS SMH+G+LA A+HA    + F V+Y PR   S+F++ L KY + V  N   +GMRF+M
Sbjct: 239 SSHSMHLGVLATASHAVRTQTYFVVYYKPRT--SQFIISLNKYLETV-KNGYEVGMRFKM 295

Query: 306 MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            FE EES  RR+ GTI G+ D+ P +W +S+WR+L++ WDE    ++  RVS WEIEP
Sbjct: 296 RFEGEESPERRFTGTIVGVGDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIEP 352


>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
          Length = 837

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 179/346 (51%), Positives = 228/346 (65%), Gaps = 22/346 (6%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW ACAGP+++LP  GT VVYFPQGH EQ         D        +P  L C +LNV
Sbjct: 33  ELWRACAGPVISLPRKGTIVVYFPQGHLEQAPKFRAFAHD--------IPPHLFCRVLNV 84

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREAL---------LRSDLALKSNKPQTEFFCKTLTA 138
            LHA+  TDEVYAQ++L P P    ++L               L +  P    FCKTLTA
Sbjct: 85  NLHAEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEIEELSTATPH--MFCKTLTA 142

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH   W FRHIYRGQP+RHLLT
Sbjct: 143 SDTSTHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLT 202

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS FV+ K+L +GD+VLF+R E  +L LGIRRA R    +  S+L S ++++  LAA 
Sbjct: 203 TGWSSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALAAV 262

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQ-ISLGMRFRMMFETEESGTRRY 317
           + A +  S F V+YNPRASP+EF++P  K+ K++  NQ +S+G RF+M +ETE++  +R 
Sbjct: 263 STAVSTKSMFHVYYNPRASPAEFIIPYRKFSKSI--NQPLSIGTRFKMRYETEDATEQRP 320

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            G ITGI D+DPVRW  S+WR L V WDE      +++VS WEIEP
Sbjct: 321 TGLITGIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEP 366


>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 179/355 (50%), Positives = 233/355 (65%), Gaps = 32/355 (9%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP----NLPSK 79
           ++  ELWHACAGPL++LP  G+ VVYFPQGH EQ++            +YP    +LP  
Sbjct: 45  SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 92

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL------------ALKSNKP 127
           + C +++V LHA+  TDEVYAQ++L P     ++ L   ++            ++KS  P
Sbjct: 93  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGSIKSMTP 152

Query: 128 QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHI 187
               FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHI
Sbjct: 153 H--MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHI 210

Query: 188 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSS 247
           YRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R    +L LGIRRA +   +     L S
Sbjct: 211 YRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCS 270

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
             +++  L A  +A +  S F + YNPRAS SEF++PL K+ K++  +  S GMRF+M  
Sbjct: 271 QQLNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSI-DHSFSAGMRFKMRV 329

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           ETE++  RRY G ITGISD+DPVRW  S+WR L V WD+  A  + NRVS WEIE
Sbjct: 330 ETEDAAERRYTGLITGISDMDPVRWPGSKWRCLLVRWDDIEA-NRHNRVSPWEIE 383


>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 791

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 189/366 (51%), Positives = 236/366 (64%), Gaps = 19/366 (5%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL +L   G  VVYFPQGH EQVA S       +IP Y +L  ++ C ++NV
Sbjct: 54  ELWHACAGPLTSLLKKGNVVVYFPQGHLEQVA-SFSPFTPLEIPTY-DLQPQIFCRVVNV 111

Query: 88  TLHADTETDEVYAQMTLQPVPSYD---REALLRSDLALKSN-------KPQTEFFCKTLT 137
            L A+ E DEVY Q+TL P P  +    E     +L  + +       K     FCKTLT
Sbjct: 112 QLLANKENDEVYTQVTLLPQPELEGMYSEGKELEELGAEEDGDERSPTKSTPHMFCKTLT 171

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQP+RHLL
Sbjct: 172 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 231

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R   +L  SV+ S + +  +L++
Sbjct: 232 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSNVLSS 291

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            A+A +  S F VFY+PRAS ++FVVP  KY K++  N +S+G RF+M FE +ES  RR 
Sbjct: 292 VANAISTKSKFHVFYSPRASHADFVVPYQKYVKSI-KNPVSIGTRFKMRFEMDESQERRC 350

Query: 318 -MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFF 376
             GT+   SDLDP RW  S+WR L V WDE      ++RVS WEI+P +AP     PP  
Sbjct: 351 SSGTLIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDP-SAPL----PPLS 405

Query: 377 RSKHPR 382
               PR
Sbjct: 406 IQSSPR 411


>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
 gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  355 bits (910), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 178/350 (50%), Positives = 237/350 (67%), Gaps = 15/350 (4%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV-----AASMKKDIDGQIPNYPNLPSK 79
           + TELWHACAGPLV +P AG  V YFPQGH EQV     AA M ++   ++P Y +LP K
Sbjct: 2   LYTELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIY-DLPYK 60

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS----NKPQTEFFCKT 135
           +LC +++V L A+  TDEV+A++TL PV   D    L S+   KS     K     F K 
Sbjct: 61  ILCKVVHVELKAEAGTDEVFARITLLPVAEEDE---LSSNKDGKSLPLHRKTCARSFTKK 117

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SDT THGGFSVP+R A++  PPLD S QPP QEL+A+DLH   W F+HIYRGQPKRH
Sbjct: 118 LTPSDTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKRH 177

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           L+T+GWS FVS KRL AGDS +F+R E  +L +G+RRA +   NLS+++LSS SM +GIL
Sbjct: 178 LITSGWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSMQLGIL 237

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           ++A+HA    S FT++++P  SP+EF++P  +Y K+   +  S G RFRM+FE EE   +
Sbjct: 238 SSASHAITTGSMFTIYFHPWTSPAEFIIPYDQYMKSAEIDY-SAGTRFRMLFEGEECAEQ 296

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA-GEKRNRVSIWEIEPV 364
           R+ GT+ G  D+D +RW NS+WR L+V WD ++     + RVS W IEP+
Sbjct: 297 RFEGTVVGTEDVDHIRWPNSEWRILKVKWDAASEPFVHQERVSPWNIEPI 346


>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  355 bits (910), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 180/354 (50%), Positives = 234/354 (66%), Gaps = 31/354 (8%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP----NLPSK 79
           ++  ELWHACAGPL++LP  G+ VVYFPQGH EQ++            +YP    +LP  
Sbjct: 42  SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 89

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQP---VPSYDREALLRSDL--------ALKSNKPQ 128
           + C +++V LHA+  TDEVYAQ++L P   +    +E  + +D         ++KS  P 
Sbjct: 90  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPH 149

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIY
Sbjct: 150 --MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIY 207

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R    +L LGIRRA +   +     L S 
Sbjct: 208 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQ 267

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            +++  L A  +A +  S F + YNPRAS SEF++PL K+ K++  +  S GMRF+M  E
Sbjct: 268 QLNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSI-DHSFSAGMRFKMRVE 326

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TE++  RRY G ITGISD+DPVRW  S+WR L V WD+  A  + NRVS WEIE
Sbjct: 327 TEDAAERRYTGLITGISDMDPVRWPGSKWRCLLVRWDDIEA-NRHNRVSPWEIE 379


>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 176/360 (48%), Positives = 232/360 (64%), Gaps = 12/360 (3%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E   + TELW  CAGPLVN+  AG  VVYFPQGH EQV A   +D   ++P Y NLPSK+
Sbjct: 27  ENDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIY-NLPSKI 85

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
            C ++ V L A+  TDEV+AQ+TL P    + ++    +      +  +  F KTLT SD
Sbjct: 86  FCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDHGNSQFFPRRTHSYSFSKTLTPSD 145

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           T+THGGFSVP+R A++  PPLD + QPP QEL+A+DLH   W FRHI+RGQPKRHLLT+G
Sbjct: 146 TNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSG 205

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS FV+ K+L AGD+ +F+R    +L +G+RRA R   N+S+SVLS  SM  GILA+A H
Sbjct: 206 WSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFH 265

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           A +  + FTV++ P  SP EF++P  +Y K+  +N  S+G RFRM+FE EE   +R  GT
Sbjct: 266 AISTGTMFTVYFRPWTSP-EFIIPYDQYIKSAENN-YSVGTRFRMLFEGEECSQQRCAGT 323

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKH 380
           I GI D+D +RW NS+WR  +V WD S       RV+ W IEP+          F + KH
Sbjct: 324 IVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIE---------FIKKKH 374


>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
 gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
          Length = 844

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 181/361 (50%), Positives = 239/361 (66%), Gaps = 10/361 (2%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K + TELW+ACAGPLV +P     V YFPQGH EQV AS  +  D Q+P Y NLPSK+L
Sbjct: 49  EKALYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEASTNQLADQQMPVY-NLPSKIL 107

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++NV L A+ +TDEV+AQ+TL P P  D  A+ +        +     FCKTLTASDT
Sbjct: 108 CRVINVQLKAEPDTDEVFAQVTLLPEPIQDENAVKKDPPQPPPPRFHVHSFCKTLTASDT 167

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           STHGGFSV RR A++  PPL   +   + E + R L D I     +  GQP+RHLL +GW
Sbjct: 168 STHGGFSVLRRHADECLPPL---VSINSTEFV-RCLIDII----MLIPGQPRRHLLQSGW 219

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           S+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA
Sbjct: 220 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHA 279

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
            +  + FTV+Y PR SP+EF+VP  +Y ++V  N   +GMRF+M FE EE+  +R+ GTI
Sbjct: 280 ISTGTLFTVYYKPRTSPAEFIVPFDRYMESV-KNNYCIGMRFKMRFEGEEAPEQRFTGTI 338

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
            GI D D  RW+ S+WR+L+V WDE++   + +RVS W +EP  AP  + P P  R K P
Sbjct: 339 VGIEDADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVEPALAPPALNPLPVPRPKRP 398

Query: 382 R 382
           R
Sbjct: 399 R 399


>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
          Length = 808

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 180/353 (50%), Positives = 227/353 (64%), Gaps = 21/353 (5%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAAS-----MKKDIDGQIPNYPNLPSK 79
           I  ELW+ACAGPL  LP  G  VVYFPQGH E+ A+S     MK D+    P +  L  +
Sbjct: 58  IYMELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDL----PTF-GLHPQ 112

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVP---SYDREALLRSDLALKSN-------KPQT 129
           + C + +V L A+ E DEVY Q++L P+P   +   E     D  +          K  +
Sbjct: 113 IFCRVDDVQLLANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERNGVNPGKSAS 172

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYR
Sbjct: 173 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYR 232

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLLTTGWS+FVS K L +GD+VLF+R E   L LGIRRA R    L  S++ S  
Sbjct: 233 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQY 292

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
               +L+A A A +  S F VFY+PRAS ++FVVP  KY K++ + +I +G RF+M F+ 
Sbjct: 293 SGSDVLSAVASAVSTKSAFNVFYSPRASHADFVVPYQKYVKSIKT-RIPVGTRFKMRFDL 351

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           ++S  RRY G +TGISD+DP RW NS+WR L V WDE      + RVS WEI+
Sbjct: 352 DDSPERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEID 404


>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
          Length = 695

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 180/370 (48%), Positives = 249/370 (67%), Gaps = 11/370 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW  CAGPLV++P  G  V YFPQGH EQ+ +S  ++++ QIP + NLPSK+LC +
Sbjct: 22  LYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLF-NLPSKILCSV 80

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD-LALKSNKPQTEFFCKTLTASDTST 143
           +++ L A+ ETDEVYAQ+TL P    D+      D    ++ K    +FCK LTASDTST
Sbjct: 81  VHIRLLAEQETDEVYAQITLHP--EADQCEPSSPDPCKPEAPKATVHWFCKILTASDTST 138

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           HGGFSV R+ A +  PPLD +   P QEL+A+DLH   W F+HI+RGQP+RHLLTTGWS 
Sbjct: 139 HGGFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRHLLTTGWST 198

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FV+ KRL AGD+ +F+R +  +L  G+RR  RQ + + SSV+SS SMH+G+LA A+HA  
Sbjct: 199 FVTSKRLVAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSVISSQSMHLGVLATASHALM 258

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITG 323
             + F V+  PR   S+F++ L+KY +A  + + SLG RFRM FE +ES  RR+ GTI  
Sbjct: 259 TKTLFVVYSKPRT--SQFIIGLSKYLEATKT-KFSLGTRFRMRFEGDESPERRFTGTIVE 315

Query: 324 ISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP--VTAPFFICPPPFFRSKHP 381
           + DL P +W  S+WR+L+V WDE  A ++ +RVS W+IEP   +AP  +   P  +SK P
Sbjct: 316 VGDLSP-QWSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAPSNLA-QPMVKSKRP 373

Query: 382 RQADDDASDL 391
           R  +  +S++
Sbjct: 374 RPVEISSSEV 383


>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
          Length = 801

 Score =  354 bits (908), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 176/360 (48%), Positives = 232/360 (64%), Gaps = 12/360 (3%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E   + TELW  CAGPLVN+  AG  VVYFPQGH EQV A   +D   ++P Y NLPSK+
Sbjct: 132 ENDDLYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIY-NLPSKI 190

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
            C ++ V L A+  TDEV+AQ+TL P    + ++    +      +  +  F KTLT SD
Sbjct: 191 FCKVVYVQLKAEACTDEVFAQVTLLPEAKQEWQSPDHGNSQFFPRRTHSYSFSKTLTPSD 250

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           T+THGGFSVP+R A++  PPLD + QPP QEL+A+DLH   W FRHI+RGQPKRHLLT+G
Sbjct: 251 TNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSG 310

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS FV+ K+L AGD+ +F+R    +L +G+RRA R   N+S+SVLS  SM  GILA+A H
Sbjct: 311 WSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGILASAFH 370

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
           A +  + FTV++ P  SP EF++P  +Y K+  +N  S+G RFRM+FE EE   +R  GT
Sbjct: 371 AISTGTMFTVYFRPWTSP-EFIIPYDQYIKSAENN-YSVGTRFRMLFEGEECSQQRCAGT 428

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKH 380
           I GI D+D +RW NS+WR  +V WD S       RV+ W IEP+          F + KH
Sbjct: 429 IVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIE---------FIKKKH 479


>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
 gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
          Length = 810

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 180/350 (51%), Positives = 228/350 (65%), Gaps = 13/350 (3%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           +I  ELWHACAGPL +LP  G  VVYFPQGH EQVA S       ++P + +L  ++ C 
Sbjct: 43  SIYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVAPSSPFS-PMEMPTF-DLQPQIFCK 100

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLALKSN-------KPQTEFFC 133
           ++NV L A+ E DEVY Q+ L P P     + E     +L +          K     FC
Sbjct: 101 VVNVQLLANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKSTPHMFC 160

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQP+
Sbjct: 161 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 220

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  SV+   + +  
Sbjct: 221 RHLLTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNSYPS 280

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +L+  A+A +  S F V Y+PRAS ++FVVP  KY K++  N + +G RF+M FE ++S 
Sbjct: 281 VLSVVANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIM-NPVCIGTRFKMRFEMDDSP 339

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            RR  G +TGISDL+P RW NS+WR L V WDE    + + RVS WEI+P
Sbjct: 340 ERRCSGVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDP 389


>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 736

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 176/349 (50%), Positives = 229/349 (65%), Gaps = 19/349 (5%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           ++  ELWHACAGPL++LP  G+ VVY PQGH E V        D  +  Y ++P  + C 
Sbjct: 49  SVCLELWHACAGPLISLPKKGSVVVYLPQGHFEHVQ-------DFPVTAY-DIPPHVFCR 100

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE---------FFCK 134
           +L+V LHA+  +DEVY Q+ L P      ++L   ++     +  TE          FCK
Sbjct: 101 VLDVKLHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADGEEEDTEAIVKSTTPHMFCK 160

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 161 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRR 220

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L +GD+VLF+R +  +L LGIRRA +  +  S +V S   ++   
Sbjct: 221 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPAT 280

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           L    +A +    F+V YNPR S SEF++P+ K+ K++  +  S+GMRFRM FETE++  
Sbjct: 281 LKGVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCS-YSVGMRFRMRFETEDAAE 339

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RR  G I GISD+DPVRW  S+WR L V WD+  A  +RNRVS WEIEP
Sbjct: 340 RRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAA-RRNRVSPWEIEP 387


>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
          Length = 722

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 183/380 (48%), Positives = 247/380 (65%), Gaps = 11/380 (2%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G++  S    G +   +  ELW  CAGPLV++P  G  V YFPQGH EQ+ AS  ++++ 
Sbjct: 12  GSSGTSQPEKGLKDDDLYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQ 71

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ 128
           +IP++ NLP+K+ C ++N+ L A+ +TDEVYA + L  +P  D+      D  + S  P+
Sbjct: 72  EIPHF-NLPAKIFCRVVNIQLLAEQDTDEVYACIAL--LPESDQTEPTNPDPNV-SEAPK 127

Query: 129 TEF--FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
            +F  FCK LTASDTSTHGGFSV R+ A +  P LD +   P QEL A+DLH   W F+H
Sbjct: 128 QKFHSFCKILTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKH 187

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E  QL +G+RR  RQ + + SSV+S
Sbjct: 188 IYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVIS 247

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S SMH+G+LA A+HA    + F V+Y PR   S+F+V L KY +AV+ N+ SL MRF+M 
Sbjct: 248 SQSMHLGVLATASHAVMTRTMFLVYYKPRT--SQFIVGLNKYLEAVN-NKFSLSMRFKMR 304

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE ++S  RR+ GTI G+ D+    W NSQWR+L+V WDE     + +RVS WEIEP  A
Sbjct: 305 FEGDDSPERRFSGTIVGVGDVS-AGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVA 363

Query: 367 PFFI-CPPPFFRSKHPRQAD 385
              +    P  + K  R AD
Sbjct: 364 STALNVTQPAVKGKRSRPAD 383


>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
          Length = 799

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 182/365 (49%), Positives = 243/365 (66%), Gaps = 11/365 (3%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW  CAGPLV++P  G  V YFPQGH EQ+ AS  ++++ +IP++ NLP+K+ C ++N+
Sbjct: 115 ELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHF-NLPAKIFCRVVNI 173

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF--FCKTLTASDTSTHG 145
            L A+ +TDEVYA + L  +P  D+      D  + S  P+ +F  FCK LTASDTSTHG
Sbjct: 174 QLLAEQDTDEVYACIAL--LPESDQTEPTNPDPNI-SEPPKQKFHSFCKILTASDTSTHG 230

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSV R+ A +  P LD +   P QEL A+DLH   W F+HIYRGQP+RHLLTTGWS FV
Sbjct: 231 GFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFV 290

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           + KRL AGD+ +F+R E  QL +G+RR  RQ + + SSV+SS SMH+G+LA A+HA    
Sbjct: 291 ASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTR 350

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           + F V+Y PR   S+F+V L KY +AV+ N+ SLGMRF+M FE ++S  RR+ GTI G+ 
Sbjct: 351 TMFLVYYKPRT--SQFIVGLNKYLEAVN-NKFSLGMRFKMRFEGDDSPERRFSGTIVGVG 407

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI-CPPPFFRSKHPRQA 384
           D+    W NSQWR+L+V WDE     + +RVS WEIEP  A   +    P  + K  R A
Sbjct: 408 DVS-AGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAVKGKRSRPA 466

Query: 385 DDDAS 389
           D  +S
Sbjct: 467 DVSSS 471


>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
          Length = 718

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 178/350 (50%), Positives = 230/350 (65%), Gaps = 22/350 (6%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGPL++LP  G+ VVY PQGH EQ         D  +  Y N+P+ + C +
Sbjct: 46  VCLELWHACAGPLISLPKKGSVVVYIPQGHFEQAQ-------DFPVTAY-NIPTHVFCRV 97

Query: 85  LNVTLHADTETDEVYAQMTLQPVPS----------YDREALLRSDLALKSNKPQTEFFCK 134
           L+V LHA+  +DEVY Q+ L P              D +    ++  +KS  P    FCK
Sbjct: 98  LDVKLHAEEGSDEVYCQVLLIPESEQVEKNLGEGDTDADGEEDTEAMVKSTTPH--MFCK 155

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 156 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRR 215

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L +GD+VLF+R +  +L LGIRRA +  +  S +  S   +  G 
Sbjct: 216 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGT 275

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           L   A+A ++   F+  YNPR S SEF++P+ K+ K++  +  S+GMRFRM FETE+S  
Sbjct: 276 LMDVANALSSRCAFSACYNPRVSSSEFIIPVNKFMKSLDCS-YSVGMRFRMRFETEDSAE 334

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           RR+ G + GISD+DPVRW  S+WR L V WD+  AG + NRVS WEIEP 
Sbjct: 335 RRFTGLVLGISDVDPVRWPGSKWRCLLVRWDDIEAG-RHNRVSPWEIEPF 383


>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
           Aux/IAA_ARF_dimerisation [Medicago truncatula]
          Length = 810

 Score =  353 bits (906), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 183/350 (52%), Positives = 229/350 (65%), Gaps = 14/350 (4%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL +LP  G  VVYFPQGH EQVA S+      +IP Y  L  ++LC ++NV
Sbjct: 56  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SLSLFSSLEIPTY-GLQPQILCRVVNV 113

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREAL-------LRSDLALKSNKPQ---TEFFCKTLT 137
            L A+ E DEVY Q+ L P        L       L +D       P    +  FCKTLT
Sbjct: 114 QLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLT 173

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQP+RHLL
Sbjct: 174 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHLL 233

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  S++ + S     L++
Sbjct: 234 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLSS 293

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            A+A +  S F VFY+PRAS ++FVVP  KY K++  N +++G RF+M FE +ES  RR 
Sbjct: 294 VANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIR-NPVTIGTRFKMKFEMDESPERRC 352

Query: 318 -MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
             G +TG+SDLDP +W  S+WR L V WDE      ++RVS WEI+P T+
Sbjct: 353 SSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTS 402


>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 584

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 180/371 (48%), Positives = 246/371 (66%), Gaps = 9/371 (2%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           S +G G  +  +  ELW ACAGPLV++P     V YFPQGH EQ+ AS   +++ +IP +
Sbjct: 15  SAQGCG--RDDLYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRIPLF 72

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFC 133
            NL SK+LC ++++   AD E+DEVYAQ+TL P  S   E         +  +P    FC
Sbjct: 73  -NLDSKILCRVIHIEPLADHESDEVYAQITLMP-ESNQNEPKSMDPCPPEPPRPVVHSFC 130

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           K LTASDTSTHGGFSV R+ A +  PPLD ++  P Q+L+A+DLH   W F+HI+RGQP+
Sbjct: 131 KVLTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPR 190

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS FV+ KRL AGDS +F+R +  +L +G+RR  RQ +++  SV+SS SMH+G
Sbjct: 191 RHLLTTGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLG 250

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LA A+HA    + F V+Y PR    +F++ L KY +AV +N+ S+GMRF M FE E+S 
Sbjct: 251 VLATASHAVTTQTRFVVYYKPRT--CQFIISLNKYLEAV-NNKFSVGMRFNMSFEGEDSP 307

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI-CP 372
            RR+ GTI G  D+ P  W NS WR+L+V WDE T+  + +RVS W+IEP+T+       
Sbjct: 308 ERRFSGTIIGAVDISP-HWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLS 366

Query: 373 PPFFRSKHPRQ 383
            P F++K PRQ
Sbjct: 367 QPXFKNKRPRQ 377


>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
 gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
 gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 601

 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 181/357 (50%), Positives = 236/357 (66%), Gaps = 8/357 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI-DGQIPNYPNLP 77
           G     + TELW ACAGPLV +P  G  V YFPQGH EQ+ AS  + + D +IP + NLP
Sbjct: 12  GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLP 70

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            K+LC +L+VTL A+ ETDEVYAQ+TLQP         L   L ++  KP  + F K LT
Sbjct: 71  PKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPL-VEPAKPTVDSFVKILT 129

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV R+ A +  P LD +   P QEL+ARDLH   W F+HI+RGQP+RHLL
Sbjct: 130 ASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLL 189

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS FV+ KRL AGD+ +F+R E   L +G+RR  +Q + + +SV+SS SM +G+LA 
Sbjct: 190 TTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLAT 249

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA    + F VFY PR S  +F++ + KY  A+  N  SLGMR+RM FE EES  R +
Sbjct: 250 ASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMK-NGFSLGMRYRMRFEGEESPERIF 306

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
            GTI G  DL   +W  S+WR+LQ+ WDE ++ ++ N+VS WEIEP  +P  + P P
Sbjct: 307 TGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPF-SPSALTPTP 361


>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
 gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana]
 gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
           [Arabidopsis thaliana]
 gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
 gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 622

 Score =  353 bits (905), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 182/361 (50%), Positives = 237/361 (65%), Gaps = 8/361 (2%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI-DGQIPNY 73
           G   G     + TELW ACAGPLV +P  G  V YFPQGH EQ+ AS  + + D +IP +
Sbjct: 29  GWNLGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF 88

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFC 133
            NLP K+LC +L+VTL A+ ETDEVYAQ+TLQP         L   L ++  KP  + F 
Sbjct: 89  -NLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPL-VEPAKPTVDSFV 146

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           K LTASDTSTHGGFSV R+ A +  P LD +   P QEL+ARDLH   W F+HI+RGQP+
Sbjct: 147 KILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPR 206

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS FV+ KRL AGD+ +F+R E   L +G+RR  +Q + + +SV+SS SM +G
Sbjct: 207 RHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLG 266

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LA A+HA    + F VFY PR S  +F++ + KY  A+  N  SLGMR+RM FE EES 
Sbjct: 267 VLATASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMK-NGFSLGMRYRMRFEGEESP 323

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP 373
            R + GTI G  DL   +W  S+WR+LQ+ WDE ++ ++ N+VS WEIEP  +P  + P 
Sbjct: 324 ERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPF-SPSALTPT 381

Query: 374 P 374
           P
Sbjct: 382 P 382


>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
           [Arabidopsis thaliana]
          Length = 601

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 181/357 (50%), Positives = 236/357 (66%), Gaps = 8/357 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI-DGQIPNYPNLP 77
           G     + TELW ACAGPLV +P  G  V YFPQGH EQ+ AS  + + D +IP + NLP
Sbjct: 12  GSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLP 70

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            K+LC +L+VTL A+ ETDEVYAQ+TLQP         L   L ++  KP  + F K LT
Sbjct: 71  PKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPL-VEPAKPAVDSFVKILT 129

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV R+ A +  P LD +   P QEL+ARDLH   W F+HI+RGQP+RHLL
Sbjct: 130 ASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLL 189

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS FV+ KRL AGD+ +F+R E   L +G+RR  +Q + + +SV+SS SM +G+LA 
Sbjct: 190 TTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLAT 249

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA    + F VFY PR S  +F++ + KY  A+  N  SLGMR+RM FE EES  R +
Sbjct: 250 ASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMK-NGFSLGMRYRMRFEGEESPERIF 306

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
            GTI G  DL   +W  S+WR+LQ+ WDE ++ ++ N+VS WEIEP  +P  + P P
Sbjct: 307 TGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPF-SPSALTPTP 361


>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  352 bits (903), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 185/376 (49%), Positives = 251/376 (66%), Gaps = 9/376 (2%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKK-DIDGQIPNYPNL 76
           GGGE   +  ELW  C+GPLV++P A   V YFPQGH EQ+ AS ++ D++   P +  L
Sbjct: 2   GGGE--YLYDELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-L 58

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTL 136
           P K+LC ++NV+L A+ +TDEVYAQ+TL PV +             +  +P+   F K L
Sbjct: 59  PPKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDGPTSPDPSPPELQRPKVHSFSKVL 118

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSV R+ A +  PPLD + Q P QEL+A D+H   W F+HI+RGQP+RHL
Sbjct: 119 TASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHL 178

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ KRL AGD+ +F+R EK +L +G+RRANRQ +++ SSV+SS SMH+G+LA
Sbjct: 179 LTTGWSTFVTSKRLVAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISSHSMHLGVLA 238

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
            A HA    + F V+Y PR   S+F++ L KY +A+ SN+ S+GMRF+M FE E+S  RR
Sbjct: 239 TARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPERR 295

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFF 376
           Y GT+ G++D  P  WK+S+WR L+V WDE  +  + N+VS WEIEP      +      
Sbjct: 296 YSGTVIGVNDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVTSENVPKSVML 354

Query: 377 RSKHPRQADDDASDLD 392
           ++K PRQ   + S LD
Sbjct: 355 KNKRPRQV-SEVSALD 369


>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
 gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
          Length = 575

 Score =  352 bits (903), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 180/350 (51%), Positives = 242/350 (69%), Gaps = 9/350 (2%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           G GE   + TELW ACAGPLV++P  G  V YFPQGH EQ+ AS  ++++ ++P + NLP
Sbjct: 11  GCGEDD-LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLF-NLP 68

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD-LALKSNKPQTEFFCKTL 136
           SK+LC ++N  L A+ ETDEVYAQ+TL  +P  D+      D    +  +P    FCK L
Sbjct: 69  SKILCRVINTQLLAEQETDEVYAQITL--LPESDQIETTSPDPCPSEPPRPTVHSFCKVL 126

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSV R+ A +  PPLD     P QEL+A+DLH   W F+HI+RGQP+RHL
Sbjct: 127 TASDTSTHGGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRHL 186

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ KRL AGDS +F+R E  +L +G+RR  RQ +++ SSV+SS SMH+G+LA
Sbjct: 187 LTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVLA 246

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
            A+HA +  + F V+Y PR   S+F++ L KY +AV+ N+ ++GMRF+M FE E+S  RR
Sbjct: 247 TASHAISTLTLFVVYYKPRT--SQFIISLNKYLEAVN-NKFAVGMRFKMRFEGEDSPERR 303

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           + GTI G+ D  P  W +S+WR+L+V WDE  +  + +RVS WEIEP  A
Sbjct: 304 FSGTIVGVEDFSP-HWNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCVA 352


>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
 gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
 gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
 gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
 gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
 gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
          Length = 788

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 181/349 (51%), Positives = 231/349 (66%), Gaps = 14/349 (4%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           I +ELWHACAGPL  LP  G  VVYFPQGH EQ  A +      +IP + +L  +++C +
Sbjct: 62  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKF-DLNPQIVCRV 119

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLALK-------SNKPQTEFFCK 134
           +NV L A+ +TDEVY Q+TL P+  +   + E     +L  +       S K     FCK
Sbjct: 120 VNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCK 179

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  F PLD+  Q P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 180 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 239

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS K L +GD+VLF+RDE  +L LGIRRA R    L  S++  +S    I
Sbjct: 240 HLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 298

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           L+  A+A +  S F VFY+PRA+ +EFV+P  KY  ++ S  + +G RFRM FE ++S  
Sbjct: 299 LSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRS-PVCIGTRFRMRFEMDDSPE 357

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RR  G +TG+ DLDP RW NS+WR L V WDES   + + RVS WEI+P
Sbjct: 358 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDP 406


>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
 gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
          Length = 798

 Score =  352 bits (902), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 181/352 (51%), Positives = 227/352 (64%), Gaps = 19/352 (5%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK---KDIDGQIPNYPNLPSKLL 81
           I  ELWH CAG L +LP  G  VVYFPQGH EQ A+S      DI        +LP ++ 
Sbjct: 52  IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQAASSSPFPPMDISTF-----DLPPQIF 106

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL----------ALKSNKPQTEF 131
           C ++NV L A+ E DEVY Q+TL P P      L   +L               K     
Sbjct: 107 CRVVNVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHM 166

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 167 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 226

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  S++ + + +
Sbjct: 227 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSY 286

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
             +L+ AA+A A  S F VFY+PRAS +EFV+P  KY K++ +N IS+G RF+M ++ ++
Sbjct: 287 PNVLSLAANAVATKSMFHVFYSPRASHAEFVIPYQKYVKSI-TNPISIGTRFKMRYDMDD 345

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           S  RR  G +TGI DLDP RW NS+WR L V WD+    + + RVS WEI+P
Sbjct: 346 SPERRSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDP 397


>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
          Length = 758

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 185/350 (52%), Positives = 228/350 (65%), Gaps = 16/350 (4%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVA-ASMKKDIDGQIPNYPNLPSKLLCI 83
           I +ELWHACAGPL +LP  G  VVYFPQGH EQ A  S    +D  IP   +L  ++ C 
Sbjct: 50  IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGAMVSYSSPLD--IPKL-DLSPQIFCR 106

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLA-------LKSNKPQTEFFC 133
           + NV L A+ ETDEVY Q+TL P+      + E     +L          S K     FC
Sbjct: 107 VANVHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTPHMFC 166

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLTASDTSTHGGFSVPRRAAE  F PLD+  Q P+QEL+A+DLH   W FRHIYRGQP+
Sbjct: 167 KTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPR 226

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS K L +GD+VLF+RDE  +L LGIRR+ R    L  S++   S    
Sbjct: 227 RHLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSSS-S 285

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           IL+  A+A +N S F VFY+PRA+ SEFV+P  KY  ++  N I +G RFRM FE ++S 
Sbjct: 286 ILSLVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSI-KNPICIGTRFRMRFEMDDSP 344

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            RR  G +TG+ D+DP RW NS+WR L V WDES   + + RVS WEI+P
Sbjct: 345 ERRCAGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDP 394


>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
 gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
          Length = 811

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 177/349 (50%), Positives = 226/349 (64%), Gaps = 13/349 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ-VAASMKKDIDGQIPNYPNLPSKLLCI 83
           I  ELWHACAGPL +LP  G  VVYFPQGH E+ V+A     +   +P +  L  ++ C 
Sbjct: 59  IYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTF-GLQPQIFCR 117

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPS----------YDREALLRSDLALKSNKPQTEFFC 133
           + +V L A+ E DEVY Q+TL P+P           ++          +   K  +  FC
Sbjct: 118 VEDVQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFC 177

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLTASDT+THGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQP+
Sbjct: 178 KTLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPR 237

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS+FVS K L +GD+VLF+R E   L LGIRRA R    L  S++ S      
Sbjct: 238 RHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGPD 297

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +L++ A A +  S F VFY+PRAS ++FVVP  KY KA++S +I +G RF+M F+ ++S 
Sbjct: 298 VLSSVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAINS-RIPVGTRFKMKFDLDDSP 356

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
            RRY G +TGISD+DP RW NS+WR L V WDE      + RVS WEI+
Sbjct: 357 ERRYSGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEID 405


>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 791

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 181/349 (51%), Positives = 231/349 (66%), Gaps = 14/349 (4%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           I +ELWHACAGPL  LP  G  VVYFPQGH EQ  A +      +IP + +L  ++ C +
Sbjct: 57  IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQ-DAMVSYSSPLEIPKF-DLNPQIFCRV 114

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYD---------REALLRSDLALKSNKPQT-EFFCK 134
           ++V L A+ ETDEVY Q+TL P+  +          +E     +  + S+  +T   FCK
Sbjct: 115 VHVQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTPHMFCK 174

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  F PLD+  Q P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 175 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 234

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS+FVS K L +GD+VLF+RDE  +L LGIRRA R    L  S++  +S    I
Sbjct: 235 HLLTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NI 293

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           L+  A+A +  S F VFY+PRA+ +EFV+P  KY  ++  N I +G RFRM FE ++S  
Sbjct: 294 LSLLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIR-NPICIGTRFRMRFEMDDSPE 352

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RR  G +TG+ DLDP RW NS+WR L V WDES   + + RVS WEI+P
Sbjct: 353 RRCAGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDP 401


>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
          Length = 335

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 173/315 (54%), Positives = 226/315 (71%), Gaps = 5/315 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV LP     V YFPQGH EQ+ ASM + ++ Q+P++ NLPSK+LC ++NV
Sbjct: 25  ELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSF-NLPSKILCKVVNV 83

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLTASDTSTHGG 146
            L A+++TDEVYAQ+TL  +P  ++  +   D  L +  +     FCKTLTASDTSTHGG
Sbjct: 84  VLRAESDTDEVYAQITL--LPESNQNEVTSPDPPLPEPTRCNVHSFCKTLTASDTSTHGG 141

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           FSV RR A+   PPLD S QPP QEL+A DLH N W FRHI+RGQP+RHLLTTGWS+FVS
Sbjct: 142 FSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWSVFVS 201

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            K+L AGD+ +F+R E  +L +G+RR  RQ  N+ SSV+SS SMH+G+LA A+HA +  +
Sbjct: 202 SKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGVLATASHAISTGT 261

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            F+VFY PR S S F+V L KY +A  ++++S+GMRF+M FE EE   R + GTI G+ D
Sbjct: 262 LFSVFYKPRTSRSTFLVSLNKYLEA-QNHKLSVGMRFKMRFEGEEVPERSFSGTIVGLGD 320

Query: 327 LDPVRWKNSQWRNLQ 341
                W NS+WR+L+
Sbjct: 321 NASPGWANSEWRSLK 335


>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
 gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
          Length = 405

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 180/380 (47%), Positives = 252/380 (66%), Gaps = 18/380 (4%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW  CAGPLV++P     V YFPQGH EQ+ AS  ++++  IP + NL  K+LC +L++
Sbjct: 31  ELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLF-NLQPKILCRVLHI 89

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLTASDTSTHGG 146
            L A+ ++DEVYAQ+ L  +P  D+      DL+L +  +P+  FFCK LTASDTSTHGG
Sbjct: 90  QLLAEQDSDEVYAQIAL--LPEADQVEPTSPDLSLPEPPRPKVHFFCKVLTASDTSTHGG 147

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           FS+ R+ A +  PPLD +   PAQEL+A+DLH   W F+HI+RGQP+RHLLTTGWS FVS
Sbjct: 148 FSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLTTGWSTFVS 207

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            KRL  GDS +F+R  K ++ +GIRR  RQP+++  SV+SS SMH+G+LA A+HA    +
Sbjct: 208 SKRLVTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGVLATASHAVTTQT 267

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            F V+Y PR   S+F++ L KY +AV  ++ S+GMRF+M FE EE   +R+ GTI G+ D
Sbjct: 268 MFVVYYKPRT--SQFIIGLNKYLEAV-KHRYSVGMRFKMKFEGEEIPEKRFTGTIVGVED 324

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF--ICPPPFFRSKHPRQA 384
               +WK+S+WR+L+V WDE  +  + +RVS W+IEP  A     + PP   ++K  R  
Sbjct: 325 -SSSQWKDSKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPPMGVKNKRHRAH 383

Query: 385 DDDAS--------DLDNVFK 396
           ++  S        +L +VFK
Sbjct: 384 NEPKSSGGNKHIHNLWHVFK 403


>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
          Length = 712

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 173/352 (49%), Positives = 227/352 (64%), Gaps = 18/352 (5%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G   ++  ELWHACAGPL++LP  GT VVY PQGH EQV+       D     Y +LP  
Sbjct: 33  GSSASVCLELWHACAGPLISLPKKGTVVVYLPQGHLEQVS-------DFPTSAY-DLPPH 84

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS--------DLALKSNKPQTEF 131
           L C +++V LHA++ TD+V+AQ++L P        LL          D+           
Sbjct: 85  LFCRVVDVKLHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTPHM 144

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++ Q P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 145 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQ 204

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LGIRRA +  ++ +   L S  ++
Sbjct: 205 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLN 264

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
              +    +A +  + F V+YNPRAS SEF++P  K+ +++  +  S GMRF+M FETE+
Sbjct: 265 YSTVTDVVNAVSTKNAFNVYYNPRASSSEFIIPSRKFLRSL-DHCFSAGMRFKMRFETED 323

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +  RRY G ITGI  LDP+RW  S+W+ L V WD+     K  RVS WEIEP
Sbjct: 324 AAERRYTGLITGIGALDPIRWPGSKWKCLVVRWDDIDT-SKHGRVSPWEIEP 374


>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 669

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 173/340 (50%), Positives = 239/340 (70%), Gaps = 6/340 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW   AGPLV +P     V+YFPQGH EQ+ AS  ++++ ++P + NLP K+LC +++ 
Sbjct: 1   ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLF-NLPXKILCQVVDT 59

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L A+ ++DEVYAQ+TL P  +    +     L ++  K +   FCK LTASDTSTHGGF
Sbjct: 60  RLLAEQDSDEVYAQITLMPEANQALPSTFEPPL-IECRKTKVHSFCKVLTASDTSTHGGF 118

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV R+ A +  PPLD + Q P QEL+A+DLH   W F+HI+RGQP+RHLLTTGWS FV+ 
Sbjct: 119 SVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTS 178

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL AGDS +F+R E  +L +G+RR  RQ +++ SSV+SS SMH+G+LA A+HA +  + 
Sbjct: 179 KRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATASHAVSTQTR 238

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           F V+Y PRA  S+F+V L+KY +A+ +N+  +GMRF+M FE EES  RR+ GTI G+ D+
Sbjct: 239 FVVYYKPRA--SQFIVSLSKYMEAM-NNKFMVGMRFKMRFEGEESPERRFSGTIVGVDDM 295

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
            P  W NS+WR+L+V WDE  + ++ +RVS WEIEP  AP
Sbjct: 296 SP-HWPNSEWRSLRVQWDELASIQRPDRVSPWEIEPFVAP 334


>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
 gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
 gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
 gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
 gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
 gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 638

 Score =  348 bits (894), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 184/375 (49%), Positives = 249/375 (66%), Gaps = 9/375 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKK-DIDGQIPNYPNLP 77
           GGE   +  ELW  CAGPLV++P A   V YFPQGH EQ+ AS ++ D++   P +  LP
Sbjct: 5   GGE--YLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LP 61

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            K+LC ++NV+L A+ +TDEVYAQ+TL PV +   E +       +  +P+   F K LT
Sbjct: 62  PKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLT 121

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV R+ A +  PPLD + Q P QEL+A D+H   W F+HI+RGQP+RHLL
Sbjct: 122 ASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLL 181

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS FV+ KRL AGD+ +F+R E  +L +G+RRAN Q +++ SSV+SS SMH+G+LA 
Sbjct: 182 TTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLAT 241

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A HA    + F V+Y PR   S+F++ L KY +A+ SN+ S+GMRF+M FE E+S  RRY
Sbjct: 242 ARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPERRY 298

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            GT+ G+ D  P  WK+S+WR L+V WDE  +  + N+VS WEIEP      +      +
Sbjct: 299 SGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLK 357

Query: 378 SKHPRQADDDASDLD 392
           +K PRQ   + S LD
Sbjct: 358 NKRPRQV-SEVSALD 371


>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
 gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
          Length = 636

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 181/369 (49%), Positives = 246/369 (66%), Gaps = 8/369 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKK-DIDGQIPNYPNLP 77
           GGE   +  ELW  CAGPLV++P A   V YFPQGH EQ+ AS ++ D++   P +  LP
Sbjct: 5   GGE--YLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LP 61

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            K+LC ++NV+L A+ +TDEVYAQ+TL PV +   E +       +  +P+   F K LT
Sbjct: 62  PKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLT 121

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV R+ A +  PPLD + Q P QEL+A D+H   W F+HI+RGQP+RHLL
Sbjct: 122 ASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLL 181

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS FV+ KRL AGD+ +F+R E  +L +G+RRAN Q +++ SSV+SS SMH+G+LA 
Sbjct: 182 TTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLAT 241

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A HA    + F V+Y PR   S+F++ L KY +A+ SN+ S+GMRF+M FE E+S  RRY
Sbjct: 242 ARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGEDSPERRY 298

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            GT+ G+ D  P  WK+S+WR L+V WDE  +  + N+VS WEIEP      +      +
Sbjct: 299 SGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENVPKSVMLK 357

Query: 378 SKHPRQADD 386
           +K PRQ  +
Sbjct: 358 NKRPRQVSE 366


>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
 gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
           truncatula]
 gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
          Length = 682

 Score =  348 bits (893), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 179/355 (50%), Positives = 230/355 (64%), Gaps = 30/355 (8%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP----NLPSK 79
           ++  ELWHACAGPL++LP  G+ VVY PQGH EQ              ++P    N+P  
Sbjct: 49  SVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAH------------DFPVSACNIPPH 96

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQP----VPSYDREALLRSDLA-------LKSNKPQ 128
           + C +L+V LHA+  +DEVY Q+ L P    +    RE ++ +D         +KS  P 
Sbjct: 97  VFCRVLDVKLHAEEGSDEVYCQVLLVPENQQLEQNVREGVIDADAEEEDTEAIVKSTTPH 156

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH + W FRHIY
Sbjct: 157 --MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRHIY 214

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R E  +L LGIRRA +  ++ S   LS  
Sbjct: 215 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGLSGM 274

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            +  G L    +A +  S F+V YNPR S SEF++P+ K+ K++  +  S GMRFRM FE
Sbjct: 275 QLDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCS-YSAGMRFRMRFE 333

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           TE++  RR+ G I GISD DPVRW  S+W+ L V WD+  A    NRVS WEIEP
Sbjct: 334 TEDAAERRFTGLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEP 388


>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
          Length = 555

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 182/352 (51%), Positives = 231/352 (65%), Gaps = 14/352 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ-IPNYPNLPSKLLCI 83
           + TELW ACAGPLV +P AG  V YFPQGH EQ+ AS  + I+ + IP++  LP K+LC 
Sbjct: 21  LYTELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVASTNQGIESEEIPDF-KLPPKILCR 79

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLTASDTS 142
           +L+V L A+ +TDEVYAQ+TL+P    D+  L   D  L +  K     F K LTASDTS
Sbjct: 80  VLSVMLKAEHDTDEVYAQITLKP--EEDQSELTSLDPPLVEPTKQMFHSFVKILTASDTS 137

Query: 143 THGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWS 202
           THGGFSV R+ A +  P LD     P QEL+ RDLH   W F+HI+RGQP+RHLLTTGWS
Sbjct: 138 THGGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWS 197

Query: 203 LFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAA 262
            FVS KRL AGD+ +F+R E   L +G+RR  R  + + +SV+SS SMH+G+LA A+HA 
Sbjct: 198 TFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAV 257

Query: 263 ANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTIT 322
              + F VFY PR   S+F+V + KY +A+  +  SLG RFRM FE EES  R + GTI 
Sbjct: 258 VTKTIFLVFYKPRI--SQFIVGVNKYMEAM-KHGFSLGTRFRMRFEGEESPERMFTGTIV 314

Query: 323 GISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
           GI DL   +W  S WR+LQV WDE T  ++ +RVS WEIEP     F+  PP
Sbjct: 315 GIGDLSS-QWPASTWRSLQVQWDEPTTFQRPDRVSPWEIEP-----FLSSPP 360


>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
          Length = 584

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 184/369 (49%), Positives = 237/369 (64%), Gaps = 12/369 (3%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASM-KKDIDGQIPNYPNLPSKLLCILLN 86
           ELW ACAGPLV +P     V YFPQGH EQ+ AS  ++ +D  IP + NLP K+LC +LN
Sbjct: 12  ELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVF-NLPPKILCRVLN 70

Query: 87  VTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-EFFCKTLTASDTSTHG 145
           V L A+ ETDEVYAQ+TLQP    D+      D  L     QT + F K LTASDTSTHG
Sbjct: 71  VMLKAEHETDEVYAQITLQP--EEDQSEPTSLDPPLTEPAKQTVDSFVKILTASDTSTHG 128

Query: 146 GFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
           GFSV R+ A +  PPLD +   P QEL+ARDLH   W F+HI+RGQP+RHLLTTGWS FV
Sbjct: 129 GFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 188

Query: 206 SGKRLFAGDSVLFIRDEKQ-QLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           + KRL AGD+ +F+R  +   L +G+RR  +Q + + +SV+SS SMH+G+LA A+HA   
Sbjct: 189 TSKRLVAGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLGVLATASHAFNT 248

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            + F V Y PR   S+F++ + KY  A+      +GMRFRM FE EES  R + GTI G 
Sbjct: 249 TTMFVVLYKPRI--SQFIISVNKYMAAMKKG-FGIGMRFRMRFEGEESPERIFTGTIVGT 305

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP--PFFRSKHPR 382
            DL P +W  S+WR+LQV WDES+  ++ N+VS WEIEP         P  P+ +SK  R
Sbjct: 306 GDLSP-QWPASKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQPYSKSKRSR 364

Query: 383 QADDDASDL 391
             D   S++
Sbjct: 365 PIDPSVSEI 373


>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
          Length = 793

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 178/347 (51%), Positives = 229/347 (65%), Gaps = 14/347 (4%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL +LP  G  VVYFPQGH EQ AAS       ++P Y +L  ++ C ++N+
Sbjct: 50  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPMEMPTY-DLQPQIFCRVVNI 107

Query: 88  TLHADTETDEVYAQMTLQP--------VPSYDREALLRSDLALKSN--KPQTEFFCKTLT 137
            L A+ E DEVY Q+TL P        +   + E L   +   ++   K     FCKTLT
Sbjct: 108 QLLANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTPHMFCKTLT 167

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQP+RHLL
Sbjct: 168 ASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 227

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  S++ S S +   L++
Sbjct: 228 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGSQSYYPNFLSS 287

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            A+A +  S F VFY+PRAS ++F VP  KY K++  N +++G RF+M FE +ES  RR 
Sbjct: 288 VANAISAKSMFHVFYSPRASHADFAVPYQKYIKSI-KNPVTIGTRFKMKFEMDESPERRC 346

Query: 318 M-GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
             G +TG+SDLDP +W  S+WR L V WDE      ++RVS WE++P
Sbjct: 347 TSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDP 393


>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
 gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
          Length = 733

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 165/313 (52%), Positives = 217/313 (69%), Gaps = 2/313 (0%)

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT 129
           +P Y +L  K+LC ++NV L A+ +TDEV+AQ+TL P P+ D  A+ +        +   
Sbjct: 1   MPVY-DLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQDENAVEKEAPPAPPPRFHV 59

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+R
Sbjct: 60  HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFR 119

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS S
Sbjct: 120 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHS 179

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A HA    + FTV+Y PR SP+EF+VP  +Y +++  N  ++GMRF+M FE 
Sbjct: 180 MHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESL-KNNYTIGMRFKMRFEG 238

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF 369
           EE+  +R+ GTI GI D D  RW  S+WR L+V WDE++   +  RVS W+IEP  AP  
Sbjct: 239 EEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPA 298

Query: 370 ICPPPFFRSKHPR 382
           + P P  R K PR
Sbjct: 299 LNPLPMPRPKRPR 311


>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
 gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
          Length = 644

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 178/365 (48%), Positives = 246/365 (67%), Gaps = 7/365 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G+K  +  ELW  CAGP+V++P  G  V YFPQGH EQ+ AS+ +++D ++P++ NL SK
Sbjct: 5   GKKDALYHELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSF-NLKSK 63

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +LC ++N    A+ + DEVY Q+TL P   +  E      L  +  KP+   FCK LTAS
Sbjct: 64  VLCRVINSHFLAEEDNDEVYVQITLMPEAPHVPEPTTPDPLIPQDVKPRFHSFCKVLTAS 123

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSV R+ A +  PPLD + Q P QEL+A+DLHD  W F+HI+RGQP+RHLLTT
Sbjct: 124 DTSTHGGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRHLLTT 183

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS FVS K+L AGDS +F+R    QL +G++R  RQ +++ SSV+SS SMH+G+LA A+
Sbjct: 184 GWSTFVSSKKLVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGVLATAS 243

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA    + F V+Y PR   ++F+V + KY +A+  ++ ++GMRF+M FE E +  RR+MG
Sbjct: 244 HAVTTQTMFVVYYKPRT--TQFIVGVNKYLEAL-KHEYAVGMRFKMQFEAEGNPDRRFMG 300

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA--PFFICPPPFFR 377
           TI GI DL   +WKNS WR+L+V WDE  A  + +RVS WEI+P     P  + PP   +
Sbjct: 301 TIVGIDDLSS-QWKNSAWRSLKVRWDEPAAIARPDRVSPWEIKPYVCSIPNVLVPPTAEK 359

Query: 378 SKHPR 382
           +K  R
Sbjct: 360 NKRHR 364


>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
 gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 174/355 (49%), Positives = 233/355 (65%), Gaps = 33/355 (9%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP----NLPSKL 80
           +  ELWHACAGPL++LP  G+ VVY PQGH EQ            +P+ P    +LP  +
Sbjct: 46  VCLELWHACAGPLISLPKRGSIVVYVPQGHLEQ------------LPDLPLGIYDLPPHV 93

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL------------ALKSNKPQ 128
            C +++V LHA+  +D+VYAQ++L P  S + E  LR  +             +K+  P 
Sbjct: 94  FCRVVDVKLHAEAASDDVYAQVSLVP-ESEEIEQKLREGVFEGDGEEEDVEATVKTTTPH 152

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++ Q P+QEL+A+DLH + W FRHIY
Sbjct: 153 --MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIY 210

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R E  +L LG+RRA +     +   L + 
Sbjct: 211 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQ 270

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            ++   LA  A+A +  S F ++YNPRAS SEF++P  K+ K++     S GMR +M FE
Sbjct: 271 QLNQSSLADVANAISMRSAFRIYYNPRASSSEFIIPFNKFLKSL-DQSFSAGMRVKMRFE 329

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           TE++  RRY G ITGIS+LDP RW  S+W+ L V WD++ A  + +RVS WE+EP
Sbjct: 330 TEDAAERRYTGLITGISELDPTRWPGSKWKCLLVRWDDTEAN-RHSRVSPWEVEP 383


>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
          Length = 608

 Score =  345 bits (885), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 179/357 (50%), Positives = 232/357 (64%), Gaps = 26/357 (7%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GGG    +  ELWHACAGPL++LP  G+ V+YFPQGH EQ A      I G       LP
Sbjct: 48  GGG----VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQ-APDFSAAIYG-------LP 95

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQP----VPSYDREALLRSD-------LALKSNK 126
             + C +L+V LHA+T TDEVYAQ++L P    +    RE ++  D       +  +SN 
Sbjct: 96  PHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNT 155

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
           P    FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S   P+QEL+ARDLH   W FRH
Sbjct: 156 PH--MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRH 213

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA++     + S   
Sbjct: 214 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQY 273

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           + +M+    +  AHA + +S F++ YNP+AS S F++P  K+ K V      +GMRF+  
Sbjct: 274 NQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV-DYPFCIGMRFKAR 332

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            E+E++  RR  G I+GISDLDP+RW  S+WR L V WD+  A   + RVS WEIEP
Sbjct: 333 VESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
 gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
 gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
 gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
           thaliana]
 gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
           thaliana]
 gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
 gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
          Length = 608

 Score =  345 bits (884), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 179/357 (50%), Positives = 232/357 (64%), Gaps = 26/357 (7%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GGG    +  ELWHACAGPL++LP  G+ V+YFPQGH EQ A      I G       LP
Sbjct: 48  GGG----VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQ-APDFSAAIYG-------LP 95

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQP----VPSYDREALLRSD-------LALKSNK 126
             + C +L+V LHA+T TDEVYAQ++L P    +    RE ++  D       +  +SN 
Sbjct: 96  PHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNT 155

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
           P    FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S   P+QEL+ARDLH   W FRH
Sbjct: 156 PH--MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRH 213

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA++     + S   
Sbjct: 214 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQY 273

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           + +M+    +  AHA + +S F++ YNP+AS S F++P  K+ K V      +GMRF+  
Sbjct: 274 NQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV-DYPFCIGMRFKAR 332

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            E+E++  RR  G I+GISDLDP+RW  S+WR L V WD+  A   + RVS WEIEP
Sbjct: 333 VESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 600

 Score =  345 bits (884), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 177/351 (50%), Positives = 233/351 (66%), Gaps = 8/351 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDI-DGQIPNYPNLPSKLLCI 83
           + +ELW ACAGPLV +P +   V YFPQGH EQ+ AS  + + D +IP + NLP K+LC 
Sbjct: 18  LYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCR 76

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           +L+V L A+ ETDEVYAQ+TLQP         L   L ++  KP  + F K LTASDTST
Sbjct: 77  VLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPL-VEPAKPTVDSFVKILTASDTST 135

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           HGGFSV R+ A +  P LD +   P QEL+ARDLH   W F+HI+RGQP+RHLLTTGWS 
Sbjct: 136 HGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWST 195

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FV+ KRL AGD+ +F+R +   L +G+RR  +Q + + +SV+SS SM +G+LA A+HA  
Sbjct: 196 FVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQSTMPASVISSQSMRLGVLATASHAVT 255

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITG 323
             + F VFY PR   S+F++ + KY  A+  N  SLGMRFRM FE EES  R + GTI G
Sbjct: 256 TTTIFVVFYKPRI--SQFIISVNKYMVAMK-NGFSLGMRFRMRFEGEESPERIFTGTIVG 312

Query: 324 ISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
             DL   +W  S+WR+LQ+ WDE ++  + N+VS WEIEP  +P  + P P
Sbjct: 313 SGDLSS-QWPASKWRSLQIQWDEPSSIPRPNKVSPWEIEPF-SPSALTPTP 361


>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
 gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
          Length = 666

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 189/400 (47%), Positives = 256/400 (64%), Gaps = 32/400 (8%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           S E GG      + ELW A AGPLV++P  G  V YFPQGH EQ+ AS  ++++ +IP  
Sbjct: 9   SAEVGGCS----DEELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVL 64

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQP--------VPSYDREALLRSDLALKSN 125
             LP+K+LC ++N+ L A+ ETDEVYAQ+TL P        +P    E L R        
Sbjct: 65  -KLPTKILCRIVNIHLLAEQETDEVYAQITLVPESNQNEPTIPDPPTEELPR-------- 115

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
            P+   FCK LTASDTSTHGGFSV R+ A +  PPLD S   P QEL+A+DLH   W F+
Sbjct: 116 -PKIHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFK 174

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL 245
           HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+  E  +L +G+RR  RQ +++ SSV+
Sbjct: 175 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVI 233

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
           SS SMH+G+LA A+HA A  + F V+Y PR   S+F+V + KY  AV SN+ ++GMRFRM
Sbjct: 234 SSQSMHLGVLATASHAVATQTLFVVYYKPRT--SQFIVSVNKYLSAV-SNKFAVGMRFRM 290

Query: 306 MFETEESGT--RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            FE+++S    +R+ GTI G+ D+ P  W NS+WR+L+V WDE +A  + +RVS WEIEP
Sbjct: 291 RFESDDSAESDKRFSGTIVGVEDISP-HWANSKWRSLKVQWDEPSAITRPDRVSPWEIEP 349

Query: 364 V--TAPFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPW 401
              +A      P   ++K PR    +  D+D     ++ W
Sbjct: 350 FVSSASTATVQPTAAKTKRPRPT-SEIPDVDTTSAASIFW 388


>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
          Length = 608

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 179/357 (50%), Positives = 232/357 (64%), Gaps = 26/357 (7%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GGG    +  ELWHACAGPL++LP  G+ V+YFPQGH EQ A      I G       LP
Sbjct: 48  GGG----VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQ-APDFSAAIYG-------LP 95

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQP----VPSYDREALLRSD-------LALKSNK 126
             + C +L+V LHA+T TDEVYAQ++L P    +    RE ++  D       +  +SN 
Sbjct: 96  PHVFCRILDVKLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNT 155

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
           P    FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S   P+QEL+ARDLH   W FRH
Sbjct: 156 PH--MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRH 213

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA++     + S   
Sbjct: 214 IYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQY 273

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           + +M+    +  AHA + +S F++ YNP+AS S F++P  K+ K V      +GMRF+  
Sbjct: 274 NQNMNHNNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVV-DYPFCIGMRFKAR 332

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            E+E++  RR  G I+GISDLDP+RW  S+WR L V WD+  A   + RVS WEIEP
Sbjct: 333 VESEDASERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEP 389


>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 662

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 174/354 (49%), Positives = 239/354 (67%), Gaps = 12/354 (3%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           +G G G     + T+LW  CAGPLV++P  G  V YFPQGH EQ+ AS  + ++ +IP++
Sbjct: 2   AGVGDGD----LYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHF 57

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-EFF 132
            NLP K+LC ++++ L A+ ETDEVYA++TL  +P  ++E     D +    + Q    F
Sbjct: 58  -NLPPKILCRVVHIQLLAEQETDEVYARITL--LPESNQEEPTSPDPSPPETQKQVFHTF 114

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            K LTASDTSTHGGFSV RR A +  P LD +   P+QEL+A DLH   W F+HI+RGQP
Sbjct: 115 SKILTASDTSTHGGFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQP 174

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
           +RHLLTTGWS FV+ K+L AGD+ +F+R E  +L +G+RR  RQ + + SSV+SS SMH+
Sbjct: 175 RRHLLTTGWSTFVTSKKLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHL 234

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
           G+LA A+HA   ++ F V+Y PR   S+F++ + KY +A  +N+ S+GMRF+M FE E+S
Sbjct: 235 GVLATASHAFLTSTMFVVYYKPRT--SQFIIGVNKYLEA-ENNKFSVGMRFKMRFEVEDS 291

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
             RR+ GTI G+ D+ P  W NSQWR+L+V WDE     +  RVS WEIEP  A
Sbjct: 292 PERRFSGTIVGVGDVSP-GWWNSQWRSLKVQWDEPAIIPRPERVSSWEIEPFAA 344


>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
 gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
          Length = 822

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 183/362 (50%), Positives = 229/362 (63%), Gaps = 26/362 (7%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL +LP  G  VVYFPQGH EQVA S+      +IP Y  L  ++LC ++NV
Sbjct: 56  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SLSLFSSLEIPTY-GLQPQILCRVVNV 113

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREAL-------LRSDLALKSNKPQ---TEFFCKTLT 137
            L A+ E DEVY Q+ L P        L       L +D       P    +  FCKTLT
Sbjct: 114 QLLANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLT 173

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG------- 190
           ASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRG       
Sbjct: 174 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETELL 233

Query: 191 -----QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL 245
                QP+RHLLTTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  S++
Sbjct: 234 CWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESII 293

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
            + S     L++ A+A +  S F VFY+PRAS ++FVVP  KY K++  N +++G RF+M
Sbjct: 294 GNQSCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIR-NPVTIGTRFKM 352

Query: 306 MFETEESGTRRY-MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            FE +ES  RR   G +TG+SDLDP +W  S+WR L V WDE      ++RVS WEI+P 
Sbjct: 353 KFEMDESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPS 412

Query: 365 TA 366
           T+
Sbjct: 413 TS 414


>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
 gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
 gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
 gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
 gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
 gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
 gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
          Length = 602

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 176/343 (51%), Positives = 226/343 (65%), Gaps = 7/343 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ-IPNYPNLPSKLLCI 83
           + TELW  CAGPLV +P A   V YFPQGH EQ+ AS  + I+ + IP + +LP K+LC 
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           +L+VTL A+ ETDEVYAQ+TLQP         L   + +   K +   F K LTASDTST
Sbjct: 81  VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPI-VGPTKQEFHSFVKILTASDTST 139

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           HGGFSV R+ A +  P LD +   P QEL+ RDLH   W F+HI+RGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FVS KRL AGD+ +F+R E   L +G+RR  R  + + +SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITG 323
             + F VFY PR   S+F+V + KY +A+  +  SLG RFRM FE EES  R + GTI G
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAI-KHGFSLGTRFRMRFEGEESPERIFTGTIVG 316

Query: 324 ISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
             DL   +W  S+WR+LQV WDE T  ++ ++VS WEIEP  A
Sbjct: 317 SGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLA 358


>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
          Length = 605

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 176/348 (50%), Positives = 229/348 (65%), Gaps = 23/348 (6%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL++LP  G+ V+YFPQGH EQ A      I G       LP  + C +L+V
Sbjct: 52  ELWHACAGPLISLPKRGSLVLYFPQGHLEQ-APDFSAAIYG-------LPPHVFCRILDV 103

Query: 88  TLHADTETDEVYAQMTLQP----VPSYDREALLRSD-------LALKSNKPQTEFFCKTL 136
            LHA+T TDEVYAQ++L P    V    RE ++  D       +  ++N P    FCKTL
Sbjct: 104 KLHAETATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPH--MFCKTL 161

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL+ARDLH   W FRHIYRGQP+RHL
Sbjct: 162 TASDTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRRHL 221

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA++     + S   + +M+    A
Sbjct: 222 LTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNNFA 281

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
              HA + NS F ++YNP+AS S F++P  K+ K V      +GMRF+   E+E++  RR
Sbjct: 282 EVVHAISTNSAFNIYYNPKASWSNFIIPAPKFLKTV-DYPFCIGMRFKARVESEDASERR 340

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTA-GEKRNRVSIWEIEP 363
             G ITGI+DLDP+RW  S+WR L V WD++ A G  + R+S WEIEP
Sbjct: 341 SPGIITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEP 388


>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
 gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
          Length = 714

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 174/355 (49%), Positives = 231/355 (65%), Gaps = 33/355 (9%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP----NLPSKL 80
           +  ELWHACAGPL++LP  G+ VVYFPQGH EQ            +P+ P    +LPS +
Sbjct: 46  VCLELWHACAGPLISLPKRGSVVVYFPQGHLEQ------------LPDLPLAVYDLPSHV 93

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL------------ALKSNKPQ 128
            C +++V LHA+  +DEVYAQ++L P  S + E  LR  +             +K   P 
Sbjct: 94  FCRVVDVKLHAEAASDEVYAQVSLVP-ESEEIEQKLREGIFEGDGEEEDGEATVKMTTPH 152

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++ Q P+QEL+A+DLH + W FRHIY
Sbjct: 153 --MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIY 210

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R E  +L LG+RRA +     +     + 
Sbjct: 211 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPAQWNH 270

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            ++       A+A +  S F ++YNPRAS SEF++P  K+ K++     S GMRF+M FE
Sbjct: 271 QLNQISPGDVANAISTRSFFHIYYNPRASSSEFIIPFNKFLKSL-DQSFSSGMRFKMRFE 329

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           TE++  RRY G ITG+S+LDP RW  S+W+ L V WD+  A  + +RVS WE+EP
Sbjct: 330 TEDAAERRYTGIITGVSELDPARWPGSKWKCLLVRWDDREA-NRLSRVSPWEVEP 383


>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
 gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 180/361 (49%), Positives = 246/361 (68%), Gaps = 10/361 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW ACAGPLV++P  G  V YFPQGH EQ+ AS  ++++ ++P + NLPSK+LC +
Sbjct: 3   LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLF-NLPSKILCRV 61

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDR-EALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           ++  L A+ +TDEVYAQ+TL  +P  D+ E       + +  +P    FCK LTASDTST
Sbjct: 62  IHTQLLAEQDTDEVYAQITL--IPESDQIEPTSPDSSSSEPPRPTVHSFCKVLTASDTST 119

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           HGGFSV R+ A +  PPLD +   P QEL+A+DLH   W F+HI+RGQP+RHLLTTGWS 
Sbjct: 120 HGGFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWST 179

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FV+ KRL AGDS +F+R E  +L +G+RR   Q +++ SSV+SS SMH+G+LA A+HA +
Sbjct: 180 FVTSKRLVAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVLATASHAVS 239

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITG 323
             + F V+Y PR   S+F++ L KY +AV SN+  +GMRF+M FE E+S  RR+ GTI G
Sbjct: 240 TLTLFVVYYKPRT--SQFIISLNKYLEAV-SNKFVVGMRFKMRFEGEDSPDRRFSGTIVG 296

Query: 324 ISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA--PFFICPPPFFRSKHP 381
           + D  P  W +S+WR+L+V WDE     + +RVS WEIEP  A  P  +  P   ++K P
Sbjct: 297 VEDFSP-HWNDSKWRSLKVQWDEPAPIPRPDRVSPWEIEPCVASVPTNLSQPVTQKNKRP 355

Query: 382 R 382
           R
Sbjct: 356 R 356


>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
 gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
          Length = 713

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 177/351 (50%), Positives = 226/351 (64%), Gaps = 19/351 (5%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASM---KKDIDGQIPNYPNLPSKLL 81
           I  ELWHACAGPL +LP  G  VVYFPQGH EQ+A+S     +D+    PN+ +L  ++ 
Sbjct: 38  IYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQLASSSPFSHRDM----PNF-DLHPQIF 92

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLALKSN-------KPQTEF 131
           C ++NV L A+ E DEVY ++TL P P     D E     +L +          K     
Sbjct: 93  CKVVNVQLLANRENDEVYTRLTLLPQPEVVGQDLEGKELQELGVDGEGDDASPTKSTPHM 152

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FP LD+  Q P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 153 FCKTLTASDTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQ 212

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  SV    +  
Sbjct: 213 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSL 272

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
              L+  ++A +  S FTV Y+PRA+ + FVVP  KY K++ +N + +G RF+M FE ++
Sbjct: 273 PSALSLVSNAISTKSVFTVSYSPRATHAVFVVPYQKYIKSI-TNAVCIGTRFKMRFEMDD 331

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           S  RR  G +TG +DLDP +W NS+WR L V WDE    + + RVS WEI+
Sbjct: 332 SPERRCSGVVTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEID 382


>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
          Length = 831

 Score =  342 bits (876), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 181/384 (47%), Positives = 236/384 (61%), Gaps = 61/384 (15%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP----NLPSK 79
           ++  ELWHACAGPL++LP  G+ VVYFPQGH EQ++            +YP    +LP  
Sbjct: 45  SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQLS------------DYPAVAYDLPPH 92

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQP---VPSYDREALLRSDL--------ALKSNKPQ 128
           + C +++V LHA+  TDEVYAQ++L P   +    +E  + +D         ++KS  P 
Sbjct: 93  VFCRVVDVKLHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPH 152

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIY
Sbjct: 153 --MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIY 210

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R    +L LGIRRA +   +     L S 
Sbjct: 211 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQ 270

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            +++  L A  +A +  S F + YNPRAS SEF++PL K+ K++  +  S GMRF+M  E
Sbjct: 271 QLNLNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSI-DHSFSAGMRFKMRVE 329

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWR------------------------------ 338
           TE++  RRY G ITGISD+DPVRW  S+WR                              
Sbjct: 330 TEDAAERRYTGLITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDL 389

Query: 339 NLQVGWDESTAGEKRNRVSIWEIE 362
           +LQV WD+  A  + NRVS WEIE
Sbjct: 390 SLQVRWDDIEA-NRHNRVSPWEIE 412


>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
          Length = 856

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 176/366 (48%), Positives = 235/366 (64%), Gaps = 22/366 (6%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPLV +P  G  V YFPQGH EQV ASM +  D Q+  Y +LPSKLLC +LNV
Sbjct: 19  ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRVLNV 77

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-EFFCKTLTASDTSTHGG 146
            L A+ +TDEVYAQ+ L P P        ++++A++   P +     +      ++    
Sbjct: 78  ELKAEQDTDEVYAQVMLMPEPE-------QNEMAVEKTTPTSGPVQARPPGEGPSARRSP 130

Query: 147 FSVPRRAAEKIF----------PPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
              P R A  ++          P  D +  PP QEL+A+DLH   W FRHI+RGQP+RHL
Sbjct: 131 RLTPARTAASLYSAATLMSASLPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHL 190

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           L +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N+ SSV+SS SMH+G+LA
Sbjct: 191 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLA 250

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
            A HA    S FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R
Sbjct: 251 TAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNN-YSVGMRFRMRFEGEEAPEQR 309

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFF 376
           + GTI G  +LDPV W  S WR+L+V WDE +   + +RVS W+IEP ++P  + P P  
Sbjct: 310 FTGTIIGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSP-PVNPLPLS 367

Query: 377 RSKHPR 382
           R K PR
Sbjct: 368 RVKRPR 373


>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
          Length = 559

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 176/357 (49%), Positives = 230/357 (64%), Gaps = 8/357 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ-VAASMKKDIDGQIPNYPNLP 77
           G     +  ELW ACAGPLV +P  G  V YFPQGH EQ VA + +  +D +IP++ NLP
Sbjct: 12  GSYDDQLYMELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALTNQGVVDQEIPDF-NLP 70

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            K+LC +L+V L A+ ETDEVYAQ+TLQP         L   L ++  K   + F K LT
Sbjct: 71  PKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPL-VEPAKQSVDSFVKILT 129

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV R+ A +  P LD       QEL+ARDLH   W F+HI+RGQP+RHLL
Sbjct: 130 ASDTSTHGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWRFKHIFRGQPRRHLL 189

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS FV+ KRL AGD+ +F+R +   L +G+RR  RQ + + +SV+SS SMH+G+LA 
Sbjct: 190 TTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLARQQSTMPASVISSQSMHLGVLAT 249

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA    + F VFY PR   S+F++ + KY  A+      +GMRFRM FE EES  R +
Sbjct: 250 ASHAVNTKTLFVVFYKPRI--SQFIIGVNKYMAAMKIG-FPIGMRFRMRFEGEESPERIF 306

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP 374
            GTI G  DL   +W  S+WR+LQ+ WDE +  ++ N+VS WEIEP  +P  + P P
Sbjct: 307 TGTIVGTGDLSS-QWPASKWRSLQIQWDEPSTVQRPNKVSTWEIEPF-SPSVLTPTP 361


>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
          Length = 802

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 175/360 (48%), Positives = 227/360 (63%), Gaps = 40/360 (11%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP------NLPSKLL 81
           ELWHACAGPL +LP  G  VVYFPQGH EQ+A++         P  P      +L   +L
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS----------------- 124
           C ++NV L A+ E DEVY Q+TL+P+P      LL + +A K                  
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPLPE-----LLGTGVAGKELEELALNGADGDGSGGS 160

Query: 125 -NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
             +     FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL+A+DLH   W 
Sbjct: 161 PTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRGQP+RHLLTTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           ++ + +     LA    A +  S F VFYNPRA  ++F++   KY K+++ N +S+G RF
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSIN-NPVSVGTRF 339

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE ++S  RR+ G + GISD+D  RW NS+WR L V WD+ +  + + RVS WEI+P
Sbjct: 340 KMRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDP 397


>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
 gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
          Length = 733

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 175/360 (48%), Positives = 227/360 (63%), Gaps = 40/360 (11%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP------NLPSKLL 81
           ELWHACAGPL +LP  G  VVYFPQGH EQ+A++         P  P      +L   +L
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS----------------- 124
           C ++NV L A+ E DEVY Q+TL+P+P      LL + +A K                  
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPLPE-----LLGTGVAGKELEELALNGADGDGSGGS 160

Query: 125 -NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
             +     FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL+A+DLH   W 
Sbjct: 161 PTRSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRGQP+RHLLTTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           ++ + +     LA    A +  S F VFYNPRA  ++F++   KY K+++ N +S+G RF
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSIN-NPVSVGTRF 339

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE ++S  RR+ G + GISD+D  RW NS+WR L V WD+ +  + + RVS WEI+P
Sbjct: 340 KMRFEMDDSPERRFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDP 397


>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
          Length = 733

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 175/360 (48%), Positives = 227/360 (63%), Gaps = 40/360 (11%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP------NLPSKLL 81
           ELWHACAGPL +LP  G  VVYFPQGH EQ+A++         P  P      +L   +L
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASAS--------PFSPMEMRTFDLQPHIL 105

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS----------------- 124
           C ++NV L A+ E DEVY Q+TL+P+P      LL + +A K                  
Sbjct: 106 CRVINVHLLANKENDEVYTQLTLRPLPE-----LLGTGVAGKELEELALNGADGDGSGGS 160

Query: 125 -NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
             K     FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL+A+DLH   W 
Sbjct: 161 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWR 220

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRGQP+RHLLTTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  S
Sbjct: 221 FRHIYRGQPRRHLLTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDS 280

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           ++ + +     LA    A +  S F VFYNPRA  ++F++   KY K+++ N +S+G RF
Sbjct: 281 IVGNQNSCANDLARVVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSIN-NPVSVGTRF 339

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +M FE ++S  R++ G + GISD+D  RW NS+WR L V WD+ +  + + RVS WEI+P
Sbjct: 340 KMRFEMDDSPERKFNGVVVGISDMDSFRWPNSKWRCLTVRWDKDS--DHQERVSPWEIDP 397


>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
          Length = 326

 Score =  339 bits (869), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 164/292 (56%), Positives = 209/292 (71%), Gaps = 3/292 (1%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGPLV +P  G  V YFPQGH EQV AS  +  D Q+P Y +L SK+LC +
Sbjct: 34  LYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIY-DLRSKILCRV 92

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           +NV L A  +TDEV+AQ+TL P P+ D  A+ +        +     FCKTLTASDTSTH
Sbjct: 93  INVQLKAKPDTDEVFAQITLLPEPNQDENAVEKEPPPPLLPRFHVHSFCKTLTASDTSTH 152

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSV RR AE+  P LD S QPP Q+L+A+DLH N W FRHI+RGQP+RHLL +GWS+F
Sbjct: 153 GGFSVLRRHAEECLPVLDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVF 212

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           VS KRL AGD+ +F+R EK +L +G+RRA RQ  N+ SSV+SS SMH+G+LA A HA + 
Sbjct: 213 VSSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVST 271

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
            + FTV+Y PR SP+EF+VP  +Y ++V SN  S+GMRF+M FE EE+  +R
Sbjct: 272 GTMFTVYYKPRISPAEFIVPFDQYMESVKSN-YSIGMRFKMRFEGEEAPEQR 322


>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
          Length = 1055

 Score =  339 bits (869), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 174/341 (51%), Positives = 224/341 (65%), Gaps = 7/341 (2%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ-IPNYPNLPSKLLCI 83
           + TELW ACAGPLV +P  G  V YFPQGH EQ+ AS  + I+ + IP++  LP K+LC 
Sbjct: 21  LYTELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQGIESEKIPDF-KLPPKILCQ 79

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           +L+V L A+ +TDEVYAQ+TL+P         L   + ++  K     F K LTASDTST
Sbjct: 80  VLSVMLKAEHDTDEVYAQITLKPEEDQSEPTSLDPPI-VEPTKQMFHSFVKILTASDTST 138

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           HGGFSV R+ A +  P LD +   P QEL+ RDLH   W F+HI+RGQP+RHLLTTGWS 
Sbjct: 139 HGGFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 198

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FVS KRL AGD+ +F+R E   L +G+RR  R    + +SV+SS SMH+G+LA A+HA  
Sbjct: 199 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQNTMPASVISSQSMHLGVLATASHAVN 258

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITG 323
             + F VFY PR   S+F+V + KY +A+  +  SLG RFRM FE EES  R + GTI G
Sbjct: 259 TQTMFLVFYKPRI--SQFIVSVNKYMEAM-KHGFSLGTRFRMRFEGEESPERIFTGTIVG 315

Query: 324 ISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           I DL   +W  S WR+LQV WDE T  ++ ++VS WEIEP 
Sbjct: 316 IGDLSS-QWPASTWRSLQVQWDEPTTVQRPDKVSPWEIEPF 355


>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
          Length = 602

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 171/339 (50%), Positives = 235/339 (69%), Gaps = 6/339 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW   AGPLV++P A   V YFPQGH EQ+ AS ++D++   P + +LP K+LC ++NV
Sbjct: 4   ELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLF-DLPPKILCRVMNV 62

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L A+ +TDEVYAQ+ L P  + D E +       +  KP+   F K LTASDTSTHGGF
Sbjct: 63  RLQAEKDTDEVYAQIMLMPEGTVD-EPMSPDPSPPELQKPKFHSFTKVLTASDTSTHGGF 121

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SV R+ A +  PPLD + Q P QEL+A D+H   W F+HI+RGQP+RHLLTTGWS FV+ 
Sbjct: 122 SVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLLTTGWSTFVTS 181

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           K+L AGD+ +F+R E  +L +G+RRANRQ +++ SSV+SS SMH+G+LA A HA    S 
Sbjct: 182 KKLVAGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSHSMHLGVLATACHATQTRSM 241

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FTV+Y PR   S+F++ L KY +A++S + S+GMRF+M FE ++S  RR+ GT+ G+ D 
Sbjct: 242 FTVYYKPRT--SQFILSLHKYLEAMNS-KFSVGMRFKMRFEGDDSPERRFSGTVVGVQDC 298

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            P  WK+S+WR+L V WDE  +  + ++VS WE+EP  A
Sbjct: 299 SP-HWKDSKWRSLIVNWDEPASFTRPDKVSPWEMEPFAA 336


>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
           leschenaultii]
          Length = 550

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 176/356 (49%), Positives = 234/356 (65%), Gaps = 29/356 (8%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           +++ +N ELWHACAGP+V+LP  G+ VVYFPQGH EQ+           +P  P++ S++
Sbjct: 17  DREAVNIELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHFVGLSADALP--PHVFSRV 74

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLR--------------SDLALKSNK 126
           +    +VTL AD  TDEVYAQ++L P+   +R++ L               SD    +  
Sbjct: 75  V----HVTLMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLGPTKI 130

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
           P    FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P QEL+A+DLH   W FRH
Sbjct: 131 PH--MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFRH 188

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LGIRRA +  +    ++ +
Sbjct: 189 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKSTNFPAIQN 248

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S+  +I      A A +  S F + YNPR   SEF+VP  K+ K+ + + IS+G RF+M 
Sbjct: 249 SNISNI------AQAISKKSLFHICYNPRDGQSEFIVPYWKFMKSFN-HPISIGTRFKMN 301

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           FE+E++  RRY G ITGISD+DP+RW  S+WR L V WDE+    ++NRVS WEIE
Sbjct: 302 FESEDASERRYNGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIE 357


>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
          Length = 728

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 175/352 (49%), Positives = 225/352 (63%), Gaps = 25/352 (7%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP-NYPNLPSKLLC 82
           ++  ELWHACAGPL++LP  G+ VVY PQGH E V            P N  ++P  + C
Sbjct: 40  SVCLELWHACAGPLISLPKRGSVVVYLPQGHFEHVQ---------DFPVNAFDIPPHVFC 90

Query: 83  ILLNVTLHADTETDEVYAQMTLQP----VPSYDREALLRSD-------LALKSNKPQTEF 131
            +L+V LHA+  +DEVY Q+ L P    V    RE  + +D         +KS  P    
Sbjct: 91  RVLDVKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADGEEEDTGATVKSTTPH--M 148

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 149 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQ 208

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS FV+ K+L +GD+VLF+R    +L LGIRRA +     S +V S   ++
Sbjct: 209 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVPSGQQLN 268

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
              L    +A +    F+V YNPR     F++P+ K+ +++  +  S+GMRFRM FETE+
Sbjct: 269 PATLMDVVNALSTRCAFSVCYNPRYFSXXFIIPVHKFLESLDCS-YSVGMRFRMRFETED 327

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +  RR+ G I GISD+DPVRW  S+WR L V WD+  A  + NRVS WEIEP
Sbjct: 328 AADRRFTGLIAGISDVDPVRWPGSKWRCLLVRWDDIEAA-RHNRVSPWEIEP 378


>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 608

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 177/354 (50%), Positives = 225/354 (63%), Gaps = 18/354 (5%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ-IPNYPNLPSKLLCI 83
           + TELW  CAGPLV +P A   V YFPQGH EQ+ AS  + I  + IP + +LP K+LC 
Sbjct: 22  LYTELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVF-DLPPKILCR 80

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           +L +TL A+ ETDEVYAQ+TLQP         L   L ++  K     F K LTASDTST
Sbjct: 81  VLGITLKAEHETDEVYAQITLQPEEDQSEPTSLDPPL-VEPTKQMFHSFVKILTASDTST 139

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           HGGFSV R+ A +  P LD +   P QEL+ RDLH   W F+HI+RGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FVS KRL AGD+ +F+R E   L +G+RR  R  + + +SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR-------- 315
             + F VFY PR   S+F+V + KY +A+  +  SLG RFRM FE EES  R        
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAI-KHGFSLGTRFRMRFEGEESPERIVLDSETW 316

Query: 316 ---RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
              R+ GTI G  DL   +W  S+WR+LQV WDE T  ++ ++VS WEIEP  A
Sbjct: 317 SVFRFTGTIVGTGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLA 369


>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 692

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 185/395 (46%), Positives = 250/395 (63%), Gaps = 17/395 (4%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G    SGE G  E   +  + W ACAGPLV++P  G  V YFPQGH EQ+ AS  ++++ 
Sbjct: 8   GEVVGSGESGEDE---LYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQ 64

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ 128
           +IP    LP+K+LC ++NV L A+ ETDEVYAQ+TL P  S D         A     P 
Sbjct: 65  RIP-LLKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESSQDEPTNADPCTAEPPRAP- 122

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              F K LTASDTSTHGGFSV R+ A +  P LD S   P QEL+A+DLH   W F+HI+
Sbjct: 123 VHSFSKVLTASDTSTHGGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIF 182

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R +  +L +G+RR  RQ +++ SSV+SS 
Sbjct: 183 RGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQ 242

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A+HA A  + F V+Y PR   S+F++ + KY +A+   + S+GMRF+M FE
Sbjct: 243 SMHLGVLATASHAVATQTLFVVYYKPRT--SQFIIGVNKYLEAM-DKKFSVGMRFKMRFE 299

Query: 309 TEESGT--RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            ++S    +R+ GTI G+ D+ P  W NS+WR+L+V WDE  A  + +RVS WEIEP  A
Sbjct: 300 GDDSAETDKRFSGTIVGVEDISP-HWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVA 358

Query: 367 PFFI--CPPPFFRSKHPR----QADDDASDLDNVF 395
                   P   ++K PR      D D + + +VF
Sbjct: 359 SASTPSVQPTMVKTKRPRPPSETPDVDTTSVASVF 393


>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
          Length = 613

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 177/354 (50%), Positives = 227/354 (64%), Gaps = 18/354 (5%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ-IPNYPNLPSKLLCI 83
           + TELW  CAGPLV +P A   V YFPQGH EQ+ AS  + I+ + IP + +LP K+LC 
Sbjct: 22  LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF-DLPPKILCR 80

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           +L+VTL A+ ETDEVYAQ+TLQP         L   + +   K +   F K LTASDTST
Sbjct: 81  VLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPI-VGPTKQEFHSFVKILTASDTST 139

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           HGGFSV R+ A +  P LD +   P QEL+ RDLH   W F+HI+RGQP+RHLLTTGWS 
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FVS KRL AGD+ +F+R E   L +G+RR  R  + + +SV+SS SMH+G+LA A+HA  
Sbjct: 200 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSVISSQSMHLGVLATASHAVR 259

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR-------- 315
             + F VFY PR   S+F+V + KY +A+  +  SLG RFRM FE EES  R        
Sbjct: 260 TTTIFVVFYKPRI--SQFIVGVNKYMEAI-KHGFSLGTRFRMRFEGEESPERIVLDSETW 316

Query: 316 ---RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
              R+ GTI G  DL   +W  S+WR+LQV WDE T  ++ ++VS WEIEP  A
Sbjct: 317 NVFRFTGTIVGSGDLSS-QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLA 369


>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
           [Cucumis sativus]
          Length = 730

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 174/370 (47%), Positives = 240/370 (64%), Gaps = 29/370 (7%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP-NLPSKLLCI 83
           I  ELWHACAGPL +LP  G+ VVY PQGH EQ+          + P  P +LP  +LC 
Sbjct: 43  ICLELWHACAGPLTSLPKKGSLVVYLPQGHFEQMQ---------EFPPTPYDLPPHILCR 93

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL-----------ALKSNKPQTEFF 132
           +++V LHA+  +DEVYAQ++L P  +   E  ++ ++             K+  P    F
Sbjct: 94  VIDVQLHAEAGSDEVYAQVSLFP-ENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPH--MF 150

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
           CKTLTASDTSTHGGFSVPRRAAE  FPPLD++ Q P+QEL+A+DL    W FRHIYRGQP
Sbjct: 151 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQP 210

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
           +RHLLTTGWS FV+ KRL +GD+VLF+R    +L LGIRRA +  +  + S + S  ++ 
Sbjct: 211 RRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNS 270

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
             +    +A ++ S F+V YNPRA+ S+FV+P  K+ K++ ++  S+G+RFR+ FET++ 
Sbjct: 271 SSIMDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSI-NHSFSVGLRFRLSFETDDG 329

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP---VTAPFF 369
             RR+ G ITG+SD+DP+RW  S+WR+L V WD+     +  RVS WEIEP   V+    
Sbjct: 330 ADRRHTGHITGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTN 388

Query: 370 ICPPPFFRSK 379
           + PP   R++
Sbjct: 389 LVPPGLKRTR 398


>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
          Length = 731

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 174/370 (47%), Positives = 240/370 (64%), Gaps = 29/370 (7%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP-NLPSKLLCI 83
           I  ELWHACAGPL +LP  G+ VVY PQGH EQ+          + P  P +LP  +LC 
Sbjct: 43  ICLELWHACAGPLTSLPKKGSLVVYLPQGHFEQMQ---------EFPPTPYDLPPHILCR 93

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL-----------ALKSNKPQTEFF 132
           +++V LHA+  +DEVYAQ++L P  +   E  ++ ++             K+  P    F
Sbjct: 94  VIDVQLHAEAGSDEVYAQVSLFP-ENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPH--MF 150

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
           CKTLTASDTSTHGGFSVPRRAAE  FPPLD++ Q P+QEL+A+DL    W FRHIYRGQP
Sbjct: 151 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQP 210

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
           +RHLLTTGWS FV+ KRL +GD+VLF+R    +L LGIRRA +  +  + S + S  ++ 
Sbjct: 211 RRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNS 270

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
             +    +A ++ S F+V YNPRA+ S+FV+P  K+ K++ ++  S+G+RFR+ FET++ 
Sbjct: 271 SSIMDVVNAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSI-NHSFSVGLRFRLSFETDDG 329

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP---VTAPFF 369
             RR+ G ITG+SD+DP+RW  S+WR+L V WD+     +  RVS WEIEP   V+    
Sbjct: 330 ADRRHTGHITGVSDVDPIRWPGSRWRSLMVRWDDGET-NRHGRVSPWEIEPSGSVSLSTN 388

Query: 370 ICPPPFFRSK 379
           + PP   R++
Sbjct: 389 LVPPGLKRTR 398


>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
          Length = 605

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 166/302 (54%), Positives = 213/302 (70%), Gaps = 11/302 (3%)

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN-------KPQTEF 131
           ++ C +L+V LHAD E D+VYAQ+TL  +P  +   +   +L            K     
Sbjct: 1   QIFCRVLDVKLHADQENDDVYAQVTL--LPELESNEVCGKNLEEDEESGSEILCKTIPHM 58

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 59  FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQ 118

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS+FV+ K L +GD+VLF+R E  +L LGIRRA+R P+++  SVLSS  +H
Sbjct: 119 PRRHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGLH 178

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           + IL+ AA+A +  S F VFY+PRASPSEFV+P  KY K++ S  IS+GMRF+M  E E+
Sbjct: 179 LSILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSL-SRPISIGMRFKMRLEMED 237

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP-VTAPFFI 370
           S  +R  G ITG  D+DP+RW NS+WR L V WD+S+   ++ RVS WEIEP ++ P   
Sbjct: 238 SAEKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALS 297

Query: 371 CP 372
           CP
Sbjct: 298 CP 299


>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
          Length = 730

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 169/352 (48%), Positives = 220/352 (62%), Gaps = 25/352 (7%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAGP+  +P  G+ VVYFPQGH EQ+            P+       + C 
Sbjct: 64  AVCLELWHACAGPVAPMPRKGSVVVYFPQGHLEQLGGDAAAANAPVPPH-------VFCR 116

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-------------E 130
           +++V+LHAD  TDEVYAQ++L P    + EA+ R     +                    
Sbjct: 117 VVDVSLHADASTDEVYAQLSLLP---ENEEAVRRKREGAEEGSGGEDGETGKQRFSRMPH 173

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL A+DLH   W FRHIYRG
Sbjct: 174 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRG 233

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +     +   L S   
Sbjct: 234 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQCS 293

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           ++G LA  AHA A    F ++YNPR S SEF+VP  K+ K++ S   S+G+RF+M +E+E
Sbjct: 294 NLGTLANVAHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSL-SQPFSVGLRFKMRYESE 352

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           ++  RRY G ITG  D DP+ W+ S+W+ L V WD+     + NRVS WEIE
Sbjct: 353 DAAERRYTGIITGTGDADPM-WRGSKWKCLLVRWDDDVECRRPNRVSPWEIE 403


>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
 gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
 gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
 gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
 gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
 gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 699

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 171/375 (45%), Positives = 234/375 (62%), Gaps = 5/375 (1%)

Query: 12  SNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           S+ G GGG     +  ELW ACAGPLV +P     V YF QGH EQ+       +  +  
Sbjct: 2   SSQGAGGGVGDPELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQI 61

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
               +P K+LC ++NV L A+TETDEV+AQ+TLQP P  +    L      +  +P    
Sbjct: 62  KMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHS 121

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCK LT SDTSTHGGFSV RR A +  PPLD SM  P QEL+ +DLH + W F+HIYRGQ
Sbjct: 122 FCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQ 181

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS FV+ K+L +GD+ +++R E  +  +G+RR  ++ + + +SV+SS SMH
Sbjct: 182 PRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMH 241

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +G+LA+A+HA   NS F V+Y PR S S+++V + KY  A      ++GMRF+M FE E+
Sbjct: 242 LGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVG-FNVGMRFKMSFEGED 300

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV--TAPFF 369
              +++ GTI G  DL  ++W  S+W++L+V WDE T      RVS WEIE    TAP  
Sbjct: 301 VPVKKFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAI 359

Query: 370 ICP-PPFFRSKHPRQ 383
             P     ++K PR+
Sbjct: 360 NVPLQSATKNKRPRE 374


>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
 gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
          Length = 688

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 174/378 (46%), Positives = 237/378 (62%), Gaps = 12/378 (3%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G    +  ELW ACAGPLV LP     V YF QGH EQ+       +         +P+K
Sbjct: 4   GRDPELFAELWRACAGPLVELPQTDERVFYFLQGHLEQLQEPTDPALLADQIKMFQVPNK 63

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           +LC ++NV L A+TETDE+YAQ+TLQP P       L      ++++P    FCK LT S
Sbjct: 64  ILCKVVNVELKAETETDEMYAQITLQPEPDQMDLPTLPDPPLPETSRPVVHSFCKILTPS 123

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSV RR A +  PPLD SM  P QEL+ +DLH + W F+HIYRGQP+RHLLTT
Sbjct: 124 DTSTHGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTT 183

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS FV+ K+L AGD+ +++R E  +  +G+RR  ++ + + +SV+SS SMH+G+LA+A+
Sbjct: 184 GWSTFVTSKKLIAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLASAS 243

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQI--SLGMRFRMMFETEESGTRRY 317
           HA   NS F V+Y PR S S+++V L KY   + S++I  ++GMRF+M FE E+   +++
Sbjct: 244 HAIKTNSIFLVYYRPRLSQSQYIVSLNKY---LESSKIGFNVGMRFKMSFEGEDVPVKKF 300

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP--VTAPFFICPP-P 374
            GT+    DL P  W+ S W+ L+V WDE+T      RVS WEIEP   +AP    P  P
Sbjct: 301 SGTVVDKGDLSP-HWQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASAPAINIPVQP 359

Query: 375 FFRSKHPRQADDDASDLD 392
             ++K PR+    A  LD
Sbjct: 360 SMKNKRPRET---AESLD 374


>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 664

 Score =  335 bits (858), Expect = 9e-89,   Method: Compositional matrix adjust.
 Identities = 179/376 (47%), Positives = 245/376 (65%), Gaps = 10/376 (2%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           GGGGE+  +  +LW ACAGP V +P  G  V YFPQGH EQ+  S  ++++ +IP +  L
Sbjct: 6   GGGGEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLF-KL 64

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTL 136
           PSK+LC ++NV L A+ ETDEVYAQ+TL P  S   E +       +   P+   FCK L
Sbjct: 65  PSKILCRVVNVHLLAEQETDEVYAQITLVP-ESNQAEPMSPDPCPAELPSPRVHSFCKVL 123

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSV R+ A +  P LD S   P QEL+A+DL    W F+HI+RGQP+RHL
Sbjct: 124 TASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRHL 183

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ KRL AGD+ +F+R    +L +G+RR     +++ SSV+SS SMH+G+LA
Sbjct: 184 LTTGWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGVLA 243

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES--GT 314
            A+HA A  + F V+Y PRA  S+F+V + KY +A+ + + ++GMRF+  FE +ES    
Sbjct: 244 TASHAVATQTLFVVYYKPRA--SQFIVSVNKYLEAI-NQKCNVGMRFKTRFEGDESPENY 300

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA--PFFICP 372
           +R+ GTI G+ D+ P  W NS WR+L+V WDE  +  + +RV  WEIEP+ A  P     
Sbjct: 301 KRFSGTIVGVEDISP-HWVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSSQ 359

Query: 373 PPFFRSKHPRQADDDA 388
               ++K PRQA + A
Sbjct: 360 TAAIKNKRPRQASELA 375


>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
          Length = 695

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 170/372 (45%), Positives = 232/372 (62%), Gaps = 5/372 (1%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
           G GGG     +  ELW ACAGPLV +P     V YF QGH EQ+       +  +     
Sbjct: 1   GAGGGVGDPELFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMF 60

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
            +P K+LC ++NV L A+TETDEV+AQ+TLQP P  +    L      +  +P    FCK
Sbjct: 61  QVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCK 120

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
            LT SDTSTHGGFSV RR A +  PPLD SM  P QEL+ +DLH + W F+HIYRGQP+R
Sbjct: 121 ILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRR 180

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L +GD+ +++R E  +  +G+RR  ++ + + +SV+SS SMH+G+
Sbjct: 181 HLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGV 240

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LA+A+HA   NS F V+Y PR S S+++V + KY  A      ++GMRF+M FE E+   
Sbjct: 241 LASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVG-FNVGMRFKMSFEGEDVPV 299

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV--TAPFFICP 372
           +++ GTI G  DL  ++W  S+W++L+V WDE T      RVS WEIE    TAP    P
Sbjct: 300 KKFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVP 358

Query: 373 -PPFFRSKHPRQ 383
                ++K PR+
Sbjct: 359 LQSATKNKRPRE 370


>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
          Length = 771

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 177/356 (49%), Positives = 227/356 (63%), Gaps = 27/356 (7%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL +LP  G  VVYFPQGH EQ AAS        +P Y +L  ++ C + NV
Sbjct: 44  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-AASFSPFSPLDVPTY-DLHPQIFCKVANV 101

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLA-----LKSN-----KPQTEFFCKTLT 137
            L A+ E DEVY Q+TL P    +   L   +L      ++ N     K     FCKTLT
Sbjct: 102 QLLANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKSTPHMFCKTLT 161

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAE  FPPL    Q P+QEL+A+DLH   W FRHIYRGQP+RHLL
Sbjct: 162 ASDTSTHGGFSVPRRAAEDCFPPL----QRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 217

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FVS K+L +GD+VLF+R E  +L LGIRRA R    L  S++ + S +   L++
Sbjct: 218 TTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPNFLSS 277

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            A+A +  S F VFY+PRAS ++FVVP  KY +++  N +++G RF+M F+ +ES  RR 
Sbjct: 278 VANAISARSMFHVFYSPRASHADFVVPYHKYVRSI-KNPVTVGTRFKMKFDMDESPERRS 336

Query: 318 M----------GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
                      G +TG+SDLDP +W  S+WR L V WDE      ++RVS WE++P
Sbjct: 337 TTAVTINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVDP 392


>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 691

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 177/373 (47%), Positives = 244/373 (65%), Gaps = 12/373 (3%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           +G G  GE + +   LW  CAGPLV++P  G  V YFPQGH EQ+ AS  ++++ +IP  
Sbjct: 11  AGSGYSGEDE-MYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIP-L 68

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFC 133
             LP+K+LC ++NV L A+ ETDEVYAQ+TL P  + D E +       +  +     F 
Sbjct: 69  LKLPTKILCRVVNVHLLAEQETDEVYAQITLVPESNQD-EPMNPDPCTAEPPRAPVHSFS 127

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           K LTASDTSTHGGFSV R+ A +  P LD S   P QEL+A+DLH   W F+HI+RGQP+
Sbjct: 128 KVLTASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPR 187

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGWS FV+ KRL AGD+ +F+R +  +L +G+RR  RQ +++ SSV+SS SMH+G
Sbjct: 188 RHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLG 247

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +LA A+HA A  + F V+Y PR   S+F++ + KY +A+  N+ S+GMR +M FE ++S 
Sbjct: 248 VLATASHAVATQTLFVVYYKPRT--SQFIISVNKYLEAM--NRFSVGMRLKMRFEGDDSA 303

Query: 314 T--RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI- 370
              +R+ GTI G+ D+ P  W NS+WR+L+V WDE  A  + +RVS WEIEP  A     
Sbjct: 304 ETDKRFSGTIVGVEDISP-HWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTP 362

Query: 371 -CPPPFFRSKHPR 382
              P   ++K PR
Sbjct: 363 SVQPTMVKTKRPR 375


>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
          Length = 827

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 170/353 (48%), Positives = 230/353 (65%), Gaps = 26/353 (7%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ--VAASMKKDIDGQIPNYPNLPSKLLC 82
           +  ELWHACAGPL++LP  G+ VVYFPQGH EQ  V  S  +  D        LP +++C
Sbjct: 36  VCLELWHACAGPLISLPQKGSVVVYFPQGHLEQHQVQESHTRTYD--------LPPQIIC 87

Query: 83  ILLNVTLHADTETDEVYAQMTL--QPVPSYDREALLRS----------DLALKSNKPQTE 130
            +++V L A+   DE+YAQ++L  +    +  E+++RS          +  ++   P   
Sbjct: 88  RVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIPH-- 145

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL A+DL+  IW FRHIYRG
Sbjct: 146 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRG 205

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP-ANLSSSVLSSDS 249
           QP+RHLLTTGWS F + K+L  GD+VLF+R +  +L LGIRRA RQ    +  + L    
Sbjct: 206 QPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQL 265

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
             + +L+  A A +    F ++YNPRASP+EF+VP  KY ++  S+  S+GMR ++  ET
Sbjct: 266 SRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSC-SHPFSMGMRLKIRVET 324

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           E++  +RY G ITG+ D+DP+RW NS+WR L V WD++      +RVS WEIE
Sbjct: 325 EDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIE 377


>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 688

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 173/366 (47%), Positives = 237/366 (64%), Gaps = 13/366 (3%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G  +  +  ELW ACAGPLV++P     V YFPQ       AS   +++ +IP + NL S
Sbjct: 21  GCGRDDLYMELWRACAGPLVDIPRVDERVFYFPQ------QASTNLELNKRIPLF-NLDS 73

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           K+LC ++++   AD E+DEVYAQ+TL P  S   E         +  +P    FCK LTA
Sbjct: 74  KILCRVIHIEPLADHESDEVYAQITLMP-ESNQNEPKSMDPCPPEPPRPVVHSFCKVLTA 132

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSV R+ A +  PPLD ++  P Q+L+A+DLH   W F+HI+RGQP+RHLLT
Sbjct: 133 SDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLT 192

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGWS FV+ KRL AGDS +F+R +  +L +G+RR  RQ +++  SV+SS SMH+G+LA A
Sbjct: 193 TGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLATA 252

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
           +HA    + F V+Y PR    +F++ L KY +AV+ N+ S+GMRF M FE E+S  RR+ 
Sbjct: 253 SHAVTTQTRFVVYYKPRT--CQFIISLNKYLEAVN-NKFSVGMRFNMSFEGEDSPERRFS 309

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI-CPPPFFR 377
           GTI G  D+ P  W NS WR+L+V WDE T+  + +RVS W+IEP+T+        P  +
Sbjct: 310 GTIIGAVDISP-HWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQPISK 368

Query: 378 SKHPRQ 383
           +K PRQ
Sbjct: 369 NKRPRQ 374


>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
          Length = 664

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 179/378 (47%), Positives = 245/378 (64%), Gaps = 11/378 (2%)

Query: 13  NSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPN 72
           N G G GGE+  +  +LW ACAGP V +P  G  V YFPQGH EQ+  S  ++++ +IP 
Sbjct: 4   NCG-GCGGEEDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPL 62

Query: 73  YPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFF 132
           +  L SK+LC ++NV L A+ ETDEVYAQ+TL P  S   E         +  +P+   F
Sbjct: 63  F-KLSSKILCRVVNVHLLAEQETDEVYAQITLVP-ESNQTEPTSPDPCPAELPRPRVHSF 120

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
           CK LTASDTSTHGGFSV R+ A +  P LD S   P QEL+A+DL    W F+HI+RGQP
Sbjct: 121 CKVLTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQP 180

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHI 252
           +RHLLTTGWS FV+ KRL AGD+ +F+R    +L +G+RR     +++ SSV+SS SMH+
Sbjct: 181 RRHLLTTGWSTFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVISSQSMHL 240

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
           G+LA A+HA A  + F V+Y PR   S+F+V + KY +A+ + + ++GMRF+M FE +ES
Sbjct: 241 GVLATASHAVATQTLFVVYYKPRT--SQFIVSVNKYLEAI-NQKCNVGMRFKMRFEGDES 297

Query: 313 --GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA--PF 368
               +R+ GTI G+ D+ P  W NS WR+L+V WDE  +  + +RVS WEIE + A  P 
Sbjct: 298 PENDKRFSGTILGVEDISP-HWVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPT 356

Query: 369 FICPPPFFRSKHPRQADD 386
               P   ++K PRQA +
Sbjct: 357 TSSQPAVIKNKRPRQASE 374


>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
 gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
          Length = 739

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 171/352 (48%), Positives = 221/352 (62%), Gaps = 17/352 (4%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAGP+  LP  GT VVY PQGH E +         G  P    LP  + C 
Sbjct: 52  AVCLELWHACAGPVAPLPRKGTVVVYLPQGHLEHLG-DAAAAAAGGAPAPAALPPHVFCR 110

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLR--SDLALKSNKPQTE----------- 130
           +++VTLHAD  TDEVYAQ+ L    + D    LR  S+     +    E           
Sbjct: 111 VVDVTLHADASTDEVYAQLALV-AENEDVARRLRGGSEDGSAGDGDDGEAVKQRFSRMPH 169

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRG
Sbjct: 170 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRG 229

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +     +   L +   
Sbjct: 230 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCS 289

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           ++G LA  AHA A  S F ++YNPR S SEF++P +K+ K+  S Q S G+RF+M +E++
Sbjct: 290 NLGSLANVAHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKSF-SQQFSAGLRFKMRYESD 348

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           ++  RR  G I GI D DP+ W+ S+W+ L V WD+     + NR+S WEIE
Sbjct: 349 DASERRCTGVIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRRPNRISPWEIE 399


>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
          Length = 699

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 170/375 (45%), Positives = 233/375 (62%), Gaps = 5/375 (1%)

Query: 12  SNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           S+ G GGG     +   LW ACAGPLV +P     V YF QGH EQ+       +  +  
Sbjct: 2   SSQGAGGGVGDPELFAVLWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQI 61

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF 131
               +P K+LC ++NV L A+TETDEV+AQ+TLQP P  +    L      +  +P    
Sbjct: 62  KMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHS 121

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCK LT SDTSTHGGFSV RR A +  PPLD SM  P QEL+ +DLH + W F+HIYRGQ
Sbjct: 122 FCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQ 181

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS FV+ K+L +GD+ +++R E  +  +G+RR  ++ + + +SV+SS SMH
Sbjct: 182 PRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMH 241

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +G+LA+A+HA   NS F V+Y PR S S+++V + KY  A      ++GMRF+M FE E+
Sbjct: 242 LGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVG-FNVGMRFKMSFEGED 300

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV--TAPFF 369
              +++ GTI G  DL  ++W  S+W++L+V WDE T      RVS WEIE    TAP  
Sbjct: 301 VPVKKFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAI 359

Query: 370 ICP-PPFFRSKHPRQ 383
             P     ++K PR+
Sbjct: 360 NVPLQSATKNKRPRE 374


>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 763

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 161/346 (46%), Positives = 224/346 (64%), Gaps = 3/346 (0%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           G G    +  ELW ACAGPLV +P  G  V YF QGH EQ+       +  +      +P
Sbjct: 63  GRGRDPELFAELWRACAGPLVEVPQRGERVFYFLQGHLEQLQEPTDSALLAEQIKMFQVP 122

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            K+LC ++NV L A+TETDEVYAQ+TLQP        L+      ++ +P    FCK LT
Sbjct: 123 YKILCKVVNVELKAETETDEVYAQITLQPDADQSDLPLILDPTLPETPRPVVHTFCKILT 182

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SDTSTHGGFSV RR A +  PPLD +M  P QE++++DLH + W F+HIYRGQP+RHLL
Sbjct: 183 PSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQPRRHLL 242

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS FV+ K+L AGD+ +++R E  +  +G+RR  ++ + + +SV+SS SMH+G+LA+
Sbjct: 243 TTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVLAS 302

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A+HA   NS F V+Y PR S S+++V + KY+ A  +   ++GMRFRM FE E+   +++
Sbjct: 303 ASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTG-FTVGMRFRMNFEAEDVPVKKF 361

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTA-GEKRNRVSIWEIE 362
            GTI G  D  P +W  S+W++L+V WD+S A      RVS WEI+
Sbjct: 362 FGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEID 406


>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 771

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 159/295 (53%), Positives = 207/295 (70%), Gaps = 6/295 (2%)

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDR-----EALLRSDLALKSNKPQT 129
           NLP K+LC ++NV L A+ +TDEVYAQ+TL P           E  + S  A    +P+ 
Sbjct: 5   NLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEEVPSAPAAGHVRPRV 64

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH   W FRHI+R
Sbjct: 65  HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFR 124

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ  N+ SSV+SS S
Sbjct: 125 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHS 184

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           MH+G+LA A HA    + FTV+Y PR SP+EFVVP  +Y +++  N  S+GMRF+M FE 
Sbjct: 185 MHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQN-YSIGMRFKMRFEG 243

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           EE+  +R+ GTI G+ D DP  W  S+WR+L+V WDE+++  +  RVS W+IEP 
Sbjct: 244 EEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPA 298


>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
          Length = 686

 Score =  332 bits (851), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 170/374 (45%), Positives = 239/374 (63%), Gaps = 9/374 (2%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
            +G G + + +  ELW ACAGPLV LP     V YF QGH EQ+       +  +     
Sbjct: 2   AQGAGRDPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMF 61

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
            +P+K+LC ++NV L A+TETDE+YAQ+TLQP P       L      ++++P    FCK
Sbjct: 62  QVPNKILCKVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCK 121

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
            LT SDTSTHGGFSV RR A +  P LD SM  P QEL+ +DLH + W F+HIYRGQP+R
Sbjct: 122 ILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRR 181

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L AGD+ +++R E  Q  +G+RR  ++ + + +SV+SS SMH+G+
Sbjct: 182 HLLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGV 241

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS--LGMRFRMMFETEES 312
           LA+A+HA   +S F V+Y PR S S+++V L KY   + S++I   +GMRF+M FE ++ 
Sbjct: 242 LASASHAIRTHSIFLVYYRPRLSQSQYIVRLNKY---LESSKIGFDVGMRFKMSFEGDDV 298

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP--VTAPFFI 370
             +++ GT+    DL P +W+ S+W+ L+V WDE+T      RVS WEIEP   +AP   
Sbjct: 299 PIKKFSGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAIT 357

Query: 371 CPP-PFFRSKHPRQ 383
            P  P  ++K PR+
Sbjct: 358 MPVQPSMKNKRPRE 371


>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
 gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
          Length = 686

 Score =  332 bits (851), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 170/374 (45%), Positives = 239/374 (63%), Gaps = 9/374 (2%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
            +G G + + +  ELW ACAGPLV LP     V YF QGH EQ+       +  +     
Sbjct: 2   AQGAGRDPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMF 61

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
            +P+K+LC ++NV L A+TETDE+YAQ+TLQP P       L      ++++P    FCK
Sbjct: 62  QVPNKILCKVVNVELKAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCK 121

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
            LT SDTSTHGGFSV RR A +  P LD SM  P QEL+ +DLH + W F+HIYRGQP+R
Sbjct: 122 ILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRR 181

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L AGD+ +++R E  Q  +G+RR  ++ + + +SV+SS SMH+G+
Sbjct: 182 HLLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGV 241

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS--LGMRFRMMFETEES 312
           LA+A+HA   +S F V+Y PR S S+++V L KY   + S++I   +GMRF+M FE ++ 
Sbjct: 242 LASASHAIRTHSIFLVYYRPRLSQSQYIVRLNKY---LESSKIGFDVGMRFKMSFEGDDV 298

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP--VTAPFFI 370
             +++ GT+    DL P +W+ S+W+ L+V WDE+T      RVS WEIEP   +AP   
Sbjct: 299 PIKKFSGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAIT 357

Query: 371 CPP-PFFRSKHPRQ 383
            P  P  ++K PR+
Sbjct: 358 MPVQPSMKNKRPRE 371


>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
          Length = 712

 Score =  331 bits (848), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 168/348 (48%), Positives = 218/348 (62%), Gaps = 20/348 (5%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAGP+  LP  G  VVY PQGH E +      D          +P  + C 
Sbjct: 34  AVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLG-----DAPAAAAAAAAVPPHVFCR 88

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT---------EFFCK 134
           +++VTL AD  TDEVYAQ++L P    ++E + R     +                 FCK
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVP----EKEEVARRADDGEGEDGDGMKQRFARMPHMFCK 144

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 145 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRR 204

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +     +   L +   ++G 
Sbjct: 205 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGT 264

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LA  AHA A  S F ++YNPR S SEF+VP  K+ K++ S   S+G+RF+M +E+E++  
Sbjct: 265 LANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSL-SQPFSVGLRFKMRYESEDASE 323

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           RRY G ITG  D DP+ W  S+W+ L V WD+     + NRVS WEIE
Sbjct: 324 RRYTGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
          Length = 840

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 163/332 (49%), Positives = 218/332 (65%), Gaps = 25/332 (7%)

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSY---DREALLRSDLA--LKSNKPQT 129
           NLP K+ C ++NV L A+ +TDEVYAQ+TL P   Y    ++ +   ++     + +P+ 
Sbjct: 66  NLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGNVSKDKVEEEEVVPPAATERPRV 125

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPL-------------------DFSMQPPAQ 170
             FCKTLTASDTSTHGGFSV RR A++  PPL                   D S  PP Q
Sbjct: 126 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAMPLTSLLDQDMSQHPPTQ 185

Query: 171 ELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGI 230
           EL+A+DLH   W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ +F+R E  +L +G+
Sbjct: 186 ELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV 245

Query: 231 RRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYK 290
           RRA RQ AN+ SSV+SS SMH+G+LA A HA    + FTV+Y PR SPSEFVVP   Y +
Sbjct: 246 RRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKE 305

Query: 291 AVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAG 350
           ++  N  S+GMRF+M FE EE+  +R+ GTI G+ D DP  W +S+WR+L+V WDE+ + 
Sbjct: 306 SLKRNH-SIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASV 364

Query: 351 EKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
            + +RVS W+IEP  +P  + P P  R+K  R
Sbjct: 365 PRPDRVSPWQIEPANSPSPVNPLPAPRTKRAR 396


>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
 gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
           protein 1; AltName: Full=OsETTIN1
 gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
 gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
 gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
          Length = 712

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 168/348 (48%), Positives = 218/348 (62%), Gaps = 20/348 (5%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAGP+  LP  G  VVY PQGH E +      D          +P  + C 
Sbjct: 34  AVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLG-----DAPAAAAAAAAVPPHVFCR 88

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT---------EFFCK 134
           +++VTL AD  TDEVYAQ++L P    ++E + R     +                 FCK
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVP----EKEEVARRADDGEGEDGDGMKQRFARMPHMFCK 144

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 145 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRR 204

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +     +   L +   ++G 
Sbjct: 205 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGT 264

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LA  AHA A  S F ++YNPR S SEF+VP  K+ K++ S   S+G+RF+M +E+E++  
Sbjct: 265 LANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSL-SQPFSVGLRFKMRYESEDATE 323

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           RRY G ITG  D DP+ W  S+W+ L V WD+     + NRVS WEIE
Sbjct: 324 RRYTGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
          Length = 719

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 168/348 (48%), Positives = 218/348 (62%), Gaps = 20/348 (5%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAGP+  LP  G  VVY PQGH E +      D          +P  + C 
Sbjct: 34  AVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLG-----DAPAAAAAAAAVPPHVFCR 88

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT---------EFFCK 134
           +++VTL AD  TDEVYAQ++L P    ++E + R     +                 FCK
Sbjct: 89  VVDVTLLADAATDEVYAQLSLVP----EKEEVARRADDGEGEDGDGMKQRFARMPHMFCK 144

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 145 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRR 204

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +     +   L +   ++G 
Sbjct: 205 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGT 264

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           LA  AHA A  S F ++YNPR S SEF+VP  K+ K++ S   S+G+RF+M +E+E++  
Sbjct: 265 LANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSL-SQPFSVGLRFKMRYESEDATE 323

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           RRY G ITG  D DP+ W  S+W+ L V WD+     + NRVS WEIE
Sbjct: 324 RRYTGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIE 370


>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
 gi|223975541|gb|ACN31958.1| unknown [Zea mays]
          Length = 766

 Score =  329 bits (843), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 162/314 (51%), Positives = 216/314 (68%), Gaps = 6/314 (1%)

Query: 73  YPNLPSKLLCILLNVTLHADTETDEVYAQMTL----QPVPSYDREALLRSDLALKSNKPQ 128
           + +LP K+LC ++NV L A+ + DEVYAQ+TL    +P  +   E +  S  A  + +P+
Sbjct: 3   FYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALA-RPR 61

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  PPLD + QPP QEL+A+DLH   W FRHI+
Sbjct: 62  VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 121

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R +  +L +G+RRA RQ AN+ SSV+SS 
Sbjct: 122 RGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSH 181

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           SMH+G+LA A HA    + FTV+Y PR SP+EFVVP  +Y +++  N   +GMRF+M FE
Sbjct: 182 SMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRN-YPIGMRFKMRFE 240

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI G  D D   W  S+WR L+V WDE+++  +  RVS W+IEP  +P 
Sbjct: 241 GEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPP 300

Query: 369 FICPPPFFRSKHPR 382
            I P P  R K PR
Sbjct: 301 PINPLPVHRPKRPR 314


>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
 gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
          Length = 471

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 177/361 (49%), Positives = 226/361 (62%), Gaps = 28/361 (7%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL +LP  G  VVYFPQGH EQ A S       +IPNY +L  ++ C ++NV
Sbjct: 54  ELWHACAGPLTSLPKKGNVVVYFPQGHLEQFA-SFSPFKQLEIPNY-DLQPQIFCRVVNV 111

Query: 88  TLHADTETDEVYAQMTLQP---VPSYDREALLRSDLALKS-------NKPQTEFFCKTLT 137
            L A+ E DEVY Q+TL P   +     E     +L            K     FCKTLT
Sbjct: 112 QLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTLT 171

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SDTSTHGGFSVPRRAAE  FPPLD+ +Q P+QEL+A+DLH   W FRHIYRGQP+RHLL
Sbjct: 172 VSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 231

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQ--------------QLLLGIRRANRQPANLSSS 243
           TTGWS+FV+ K L +GD+VLF+R +                +L LGIRRA R    L  S
Sbjct: 232 TTGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRRAVRPRNGLPES 291

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
           ++ + + +   L++ A+A +  S F VFY+PRAS +EFVVP  KY K++  N +++G RF
Sbjct: 292 IVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSI-KNPMTIGTRF 350

Query: 304 RMMFETEESGTRRY-MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           +M  E +ES  RR   G + GI+DLDP RW  S+WR L V WD+ T    ++RVS WEI+
Sbjct: 351 KMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEID 410

Query: 363 P 363
           P
Sbjct: 411 P 411


>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
          Length = 826

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 168/357 (47%), Positives = 225/357 (63%), Gaps = 32/357 (8%)

Query: 57  QVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD----- 111
           QV AS  +  + Q     NLP K+ C ++NV L A+ +TDEVYAQ+TL P    D     
Sbjct: 27  QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG 86

Query: 112 -----REALLRSDLA--LKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPL--- 161
                ++ +   ++     + +P+   FCKTLTASDTSTHGGFSV RR A++  PPL   
Sbjct: 87  NGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSF 146

Query: 162 ----------------DFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFV 205
                           D S  PP QEL+A+DLH   W FRHI+RGQP+RHLL +GWS+FV
Sbjct: 147 FDRLIVAMPLTSLLDQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFV 206

Query: 206 SGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANN 265
           S KRL AGD+ +F+R E  +L +G+RRA RQ AN+ SSV+SS SMH+G+LA A HA    
Sbjct: 207 SAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTG 266

Query: 266 SPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
           + FTV+Y PR SPSEFVVP   Y +++  N  S+GMRF+M FE EE+  +R+ GTI G+ 
Sbjct: 267 TMFTVYYKPRTSPSEFVVPRDLYKESLKRNH-SIGMRFKMTFEGEEAAEQRFTGTIVGVG 325

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
           D DP  W +S+WR+L+V WDE+ +  + +RVS W+IEP  +P  + P P  R+K  R
Sbjct: 326 DSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRAR 382


>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
          Length = 798

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 167/362 (46%), Positives = 214/362 (59%), Gaps = 57/362 (15%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E+  I  ELWHACAGPLV +P     V YFPQGH EQV AS  +  + Q+P Y +LPSKL
Sbjct: 37  EEAAIYRELWHACAGPLVTVPRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKL 95

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           LC ++NV L A+ +TDEVYAQ+TL P P+ D  A+ +        + Q   FCKTLTASD
Sbjct: 96  LCRVINVDLKAEVDTDEVYAQITLLPEPNQDENAVEKEAPPPPPPRFQVHSFCKTLTASD 155

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
           TSTHGGFSV RR A++  PPLD S QPP QEL+A+DLH N W FRHI+RGQP+RHLL +G
Sbjct: 156 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQSG 215

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           WS+FVS KRL AGD+ +F+R    + ++                                
Sbjct: 216 WSVFVSSKRLVAGDAFIFLRTSPSEFIV-------------------------------- 243

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGT 320
                 PF                  +Y ++V +N  S+GMRF+M FE EE+  +R+ GT
Sbjct: 244 ------PFD-----------------QYMESVKNN-YSIGMRFKMRFEGEEAPEQRFTGT 279

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKH 380
           I GI D DP RW  S+WR+L+V WDE+++  +  RVS W+IEP  AP  + P P  R K 
Sbjct: 280 IVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPERVSPWKIEPALAPPALSPVPMTRPKR 339

Query: 381 PR 382
           PR
Sbjct: 340 PR 341


>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
          Length = 736

 Score =  326 bits (836), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 218/351 (62%), Gaps = 16/351 (4%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAGP+  LP  G+ VVY PQGH E +  +         P    LP  + C 
Sbjct: 48  AVCLELWHACAGPVAPLPRKGSVVVYLPQGHIEHLGDAAAAGG--GAPPPVALPPHVFCR 105

Query: 84  LLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTE-----------F 131
           +++VTLHAD  TDEVYAQ+ L        R    RS+     +  + E            
Sbjct: 106 VVDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHM 165

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 166 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQ 225

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +     +   L +  ++
Sbjct: 226 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLN 285

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +G L   AHA A  S F ++YNPR S SEF++P +K+ K+  S   S G RF++ +E+++
Sbjct: 286 LGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSF-SQPFSAGSRFKVKYESDD 344

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           +  RR  G I GI D DP+ W+ S+W+ L V WD+     + NR+S WEIE
Sbjct: 345 ASERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 394


>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
          Length = 736

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 165/351 (47%), Positives = 218/351 (62%), Gaps = 16/351 (4%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAGP+  LP  G+ VVY PQGH E +  +         P    LP  + C 
Sbjct: 48  AVCLELWHACAGPVAPLPRKGSVVVYLPQGHIEHLGDAAAAGG--GAPPPVALPPHVFCR 105

Query: 84  LLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTE-----------F 131
           +++VTLHAD  TDEVYAQ+ L        R    RS+     +  + E            
Sbjct: 106 VVDVTLHADASTDEVYAQLALVAENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPHM 165

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 166 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQ 225

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +     +   L +  ++
Sbjct: 226 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQLKNGSAFPALYNQCLN 285

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +G L   AHA A  S F ++YNPR S SEF++P +K+ K+  S   S G RF++ +E+++
Sbjct: 286 LGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSF-SQPFSAGSRFKVKYESDD 344

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           +  RR  G I GI D DP+ W+ S+W+ L V WD+     + NR+S WEIE
Sbjct: 345 ASERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIE 394


>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 731

 Score =  325 bits (833), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 167/357 (46%), Positives = 222/357 (62%), Gaps = 23/357 (6%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAGP+  +P  G+ VVY PQGH + +  +              +P  + C 
Sbjct: 64  AVCLELWHACAGPVAPMPRKGSVVVYLPQGHLDHLGDAPAHA---AASPAAAVPPHVFCR 120

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLR-----SDLALKSNKPQT--------- 129
           +++VTLHAD  TDEVYAQ++L P    + E L+R     +D        +T         
Sbjct: 121 VVDVTLHADATTDEVYAQLSLLP----ENEELVRRMREATDDVSGGEDGETVKQRFARMP 176

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFS PRRAAE  FP LD++ Q P+QEL+A+DLH   W FRHIYR
Sbjct: 177 HMFCKTLTASDTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYR 236

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           GQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +     +   L S  
Sbjct: 237 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLKNGSAFPALYSQC 296

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
            ++G LA   HA +  S F +FYNPR S SEF+VP  K+ K++ S   S+G RF+M +E+
Sbjct: 297 SNLGTLANVTHAVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSI-SQPFSVGWRFKMRYES 355

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           E++  RRY G ITG  D DP RW+ S+W+ L V WD+     + NR+S WEIE  +A
Sbjct: 356 EDAAERRYTGIITGTVDADP-RWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIELTSA 411


>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
 gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
          Length = 747

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 168/357 (47%), Positives = 223/357 (62%), Gaps = 35/357 (9%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP----NLPSK 79
           ++  ELWHACAGPL++LP  G+ VVY PQGH E ++             YP    NLP  
Sbjct: 51  SVCMELWHACAGPLISLPKKGSAVVYLPQGHLEHLS------------EYPSIACNLPPH 98

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQP-----------VPSYDREALLRSDLALKSNKPQ 128
           + C +++V L AD  TDEVYAQ++L P                       + A KS  P 
Sbjct: 99  VFCRVVDVKLQADAATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITPH 158

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  F PLD+  Q P+QEL+A+DLH   W FRHIY
Sbjct: 159 --MFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIY 216

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS-- 246
           RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R    +L LG+RRA +  A   SS L+  
Sbjct: 217 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQ--AKTCSSYLAPC 274

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           S  +++  +  A +  ++ + F + YNPR S S+F+VP  K+ K + ++  S GMRF+M 
Sbjct: 275 SKPLNVSGIVDAVNVISSRNAFNICYNPRDSSSDFIVPYHKFSKTL-AHPFSAGMRFKMR 333

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            ETE++  +R+ G + G+S++DPVRW  S+WR L V WD+     + NRVS WEIEP
Sbjct: 334 VETEDAAEQRFTGLVVGVSNVDPVRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEP 389


>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
 gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
          Length = 667

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 165/336 (49%), Positives = 222/336 (66%), Gaps = 9/336 (2%)

Query: 57  QVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALL 116
           Q+ AS  +++  QIP + NLPSK+LC ++++ L A+ ETDEVYAQ+TL P    D+    
Sbjct: 66  QLEASTNQELTQQIPKF-NLPSKILCRVVHIHLLAEQETDEVYAQITLHP--EVDQTEPT 122

Query: 117 RSDLAL-KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMAR 175
             D    +  K     FCK LTASDTSTHGGFSV R+ A +  PPLD +   P QEL+A+
Sbjct: 123 SPDQCTPEPQKRPVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAK 182

Query: 176 DLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 235
           DLH   W F+HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R +  +L +G+RR  R
Sbjct: 183 DLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGELRVGVRRLAR 242

Query: 236 QPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSN 295
           Q + + SSV+SS SMH+G+LA A+HA    + F V+Y PR   S+F++ L KY +AV+ +
Sbjct: 243 QQSPMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRT--SQFIIGLNKYLEAVN-H 299

Query: 296 QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNR 355
             SLGMRF+M FE E+S  RR+MGTI G+ D  P  W  S+WR+L++ WDE    ++ +R
Sbjct: 300 GFSLGMRFKMRFEGEDSPERRFMGTIVGVGDFSP-EWSGSKWRSLKIQWDEPATVQRPDR 358

Query: 356 VSIWEIEPVTAPFFI-CPPPFFRSKHPRQADDDASD 390
           VS WEIEP  A   +  P    +SK PR  D  ASD
Sbjct: 359 VSPWEIEPFAASASVNLPQTVGKSKRPRPVDTTASD 394


>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
          Length = 674

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 164/360 (45%), Positives = 224/360 (62%), Gaps = 20/360 (5%)

Query: 19  GGEKKT-----INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           GGE+       +  +LWHACAGP+V+LP  G+ VVY PQGH     A  +  I G++   
Sbjct: 11  GGEEDAPAPAPVCRDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGR--IRGEVA-- 66

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT---- 129
             LP  + C +++V L AD  TDEVYA++ L+         L    +  + +        
Sbjct: 67  VALPPHVACRVVDVELCADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEER 126

Query: 130 -----EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
                  FCKTLTASDTSTHGGFSVPRRAAE  FPPLD     P+QEL+A+DLH   W F
Sbjct: 127 KSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRF 186

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +         
Sbjct: 187 RHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKA 246

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
            SS+S  +  L+A A +  + S F + YNPRA+ SE+VVP  K+ K+ + + + +GMRF+
Sbjct: 247 FSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFN-HPVCIGMRFK 305

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
             +E+E+   RR  G I G+S++DP+RW  S+WR+L V W+++T    +NRVS WEIE V
Sbjct: 306 FHYESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIV 364


>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
 gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
 gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
 gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
 gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
 gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 731

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/383 (44%), Positives = 230/383 (60%), Gaps = 27/383 (7%)

Query: 3   TPANTAGAASNSGEG-------GGGEKKT-----INTELWHACAGPLVNLPAAGTHVVYF 50
           +PA   G A  +  G        GGE+       +  +LWHACAGP+V+LP  G+ VVY 
Sbjct: 45  SPAAGGGRARATAMGIDLNNTASGGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVVYL 104

Query: 51  PQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSY 110
           PQGH     A     I G++     LP  + C +++V L AD  TDEVYA++ L+     
Sbjct: 105 PQGHLSAAGAGGG--IRGEVA--VALPPHVACRVVDVELCADAATDEVYARLALRAEGEV 160

Query: 111 DREALLRSDLALKSNKPQT---------EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPL 161
               L    +  + +               FCKTLTASDTSTHGGFSVPRRAAE  FPPL
Sbjct: 161 FERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL 220

Query: 162 DFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD 221
           D     P+QEL+A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R 
Sbjct: 221 DHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRG 280

Query: 222 EKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEF 281
           +  +L LG+RRA +          SS+S  +  L+A A +  + S F + YNPRA+ SE+
Sbjct: 281 DDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVADSLKHGSVFHICYNPRATASEY 340

Query: 282 VVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQ 341
           VVP  K+ K+ + + + +GMRF+  FE+E+   RR  G I G+S++DP+RW  S+WR+L 
Sbjct: 341 VVPYWKFVKSFN-HPVCIGMRFKFHFESEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLL 398

Query: 342 VGWDESTAGEKRNRVSIWEIEPV 364
           V W+++T    +NRVS WEIE V
Sbjct: 399 VRWEDATDCNSQNRVSPWEIEIV 421


>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
 gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
           protein 2; AltName: Full=OsETTIN2
 gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
 gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
          Length = 718

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 164/348 (47%), Positives = 217/348 (62%), Gaps = 18/348 (5%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGP+  LP  G+ VVY PQGH E + A+      G  P    +P  + C +
Sbjct: 36  VCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAA-----PGSGPG-AAVPPHVFCRV 89

Query: 85  LNVTLHADTETDEVYAQMTL----QPVPSYDREAL------LRSDLALKSNKPQTEFFCK 134
           ++V+LHAD  TDEVYAQ++L    + V    RE           + A+K        FCK
Sbjct: 90  VDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCK 149

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+S+Q P QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRR 209

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS F++ K+L +GD+VLF+R E  +L LG+RRA +         L +   +   
Sbjct: 210 HLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSS 269

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           L+  AHA A  S F ++YNPR S SEF++P  K+ ++  S   S+GMRF++ +E+E++  
Sbjct: 270 LSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSF-SQPFSVGMRFKLRYESEDASE 328

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           RR  G I G  + DP+ W  S+W+ L V WD+     + N VS WEIE
Sbjct: 329 RRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 375


>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
          Length = 1043

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 169/350 (48%), Positives = 221/350 (63%), Gaps = 13/350 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG--QIPNYPNLPSKLLC 82
           + TELW ACAG  V +P     V YFPQGH EQVAA  +   D   +IP Y +LPSK+LC
Sbjct: 411 LYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPDSHLEIPVY-DLPSKILC 469

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF---FCKTLTAS 139
            ++NV L A+  +DEVYAQ+TL  VP   ++ L   +       P       F K LT S
Sbjct: 470 KIMNVELKAEAYSDEVYAQVTL--VPEVQKDNLCFEEEVNIDQIPSRNAAYSFSKILTPS 527

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVP++ A++ FPPLD ++Q PAQE++A+DL+   W FRHIYRGQPKRHLLT+
Sbjct: 528 DTSTHGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKRHLLTS 587

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL--SSSVLSSDSMHIGILAA 257
           GWSLFV+ K+L AGDS +F+R E  +L +GIRRA    +N+  SSS++S  SM +GIL  
Sbjct: 588 GWSLFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSNISQSSSLISGHSMQLGILTN 647

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A++A  N + F V+Y P  +P EF+V L  Y K+   +   +G R +M  E EES  RR 
Sbjct: 648 ASNAVGNRTMFLVYYRPWTNPFEFIVHLQTYLKSTLQD-YPIGTRVQMQHEVEES-LRRL 705

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKR-NRVSIWEIEPVTA 366
            GTI G  D+D +RW  S WR L+V WD     +    RV  W IEP+ +
Sbjct: 706 AGTIIGNEDIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCPWWIEPLES 755


>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
 gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
 gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
          Length = 606

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 159/370 (42%), Positives = 229/370 (61%), Gaps = 9/370 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G +V YFPQG+ E V AS +++++   P   +LPSK
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPSK 77

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE+YA++TL P    D   ++    +    +P    F K LTAS
Sbjct: 78  LQCRVIAIHLKVENNSDEIYAEITLMP----DTTQVVIPTQSENRFRPLVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS +GGFSVP++ A +  PPLD S   PAQE++A DLHDN W FRH YRG P+RH LTT
Sbjct: 134 DTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTT 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F++ K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A 
Sbjct: 194 GWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAK 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F V Y PR+  S+F+V   K+  AV+ N+ ++G RF M FE ++   RRY G
Sbjct: 254 HAFDNQCIFIVVYKPRS--SQFIVSYDKFLDAVN-NKFNVGSRFTMRFEGDDFSERRYFG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G+SD  P  WK S+WR+L+V WDE  +  + N+VS WEIE +     +      ++K
Sbjct: 311 TIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSLLKNK 369

Query: 380 HPRQADDDAS 389
             R+ ++  S
Sbjct: 370 RLREVNEFGS 379


>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
          Length = 620

 Score =  316 bits (809), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 158/370 (42%), Positives = 227/370 (61%), Gaps = 7/370 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G +V YFPQG+ E V AS +++++   P   +LPSK
Sbjct: 31  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQP-ICDLPSK 89

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE+YA++TL P    D   ++    +    +P    F K LTAS
Sbjct: 90  LQCRVIAIHLKVENNSDEIYAEITLMP----DTTQVVIPTQSENRFRPLVNSFTKVLTAS 145

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS +GGFSVP++ A +  PPLD S   PAQE++A DLHDN W FRH YRG P+RH LTT
Sbjct: 146 DTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTT 205

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F++ K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A 
Sbjct: 206 GWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAK 265

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F V Y P    S+F+V   K+  AV+ N+ ++G RF M FE ++   RRY G
Sbjct: 266 HAFDNQCIFIVVYKPSIRSSQFIVSYDKFLDAVN-NKFNVGSRFTMRFEGDDFSERRYFG 324

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G+SD  P  WK S+WR+L+V WDE  +  + N+VS WEIE +     +      ++K
Sbjct: 325 TIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSLLKNK 383

Query: 380 HPRQADDDAS 389
             R+ ++  S
Sbjct: 384 RLREVNEFGS 393


>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 588

 Score =  315 bits (807), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 171/347 (49%), Positives = 214/347 (61%), Gaps = 39/347 (11%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAGPL++LP  G+ V+YFPQGH EQ A      I G       LP  + C +L+V
Sbjct: 52  ELWHACAGPLISLPKRGSLVLYFPQGHLEQ-APDFSAAIYG-------LPPHVFCRILDV 103

Query: 88  TLHADTETDEVYAQMTLQP----VPSYDREALLRSD-------LALKSNKPQTEFFCKTL 136
            LHA+T TDEVYAQ++L P    +    RE ++  D       +  +SN P    FCKTL
Sbjct: 104 KLHAETTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPH--MFCKTL 161

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSVPRRAAE  FPPLD+S   P+QEL+ARDLH   W FRHIYRGQP+RHL
Sbjct: 162 TASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHL 221

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA++    L                
Sbjct: 222 LTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTL---------------- 265

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
              +     S FT   +  AS S F++P  K+ K V      +GMRF+   E+E++  RR
Sbjct: 266 -MPYRPIVFSAFTTTNHNWASWSNFIIPAPKFLKIV-DYPFCIGMRFKARVESEDASERR 323

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
             G ITGISDLDP+RW  S+WR L V WD+  A   + RVS WEIEP
Sbjct: 324 SPGIITGISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEP 370


>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
          Length = 714

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 166/347 (47%), Positives = 220/347 (63%), Gaps = 21/347 (6%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGP+  LP  G+ VVY PQGH E + A+        +P +      + C +
Sbjct: 36  VCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGPAAVAAVPPH------VFCRV 89

Query: 85  LNVTLHADTETDEVYAQMTL----QPVPSYDREAL-LRSDLALKSNKPQTEFFCKTLTAS 139
           ++V+LHAD  TDEVYAQ++L    + V    RE      + A+K        FCKTLTAS
Sbjct: 90  VDVSLHADAATDEVYAQVSLVADNEEVERRMREGEDGEGEDAVKRPARIPHMFCKTLTAS 149

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTSTHGGFSVPRRAAE  FPPLD+S+Q P+QEL+A+DLH   W FRHIYRGQP+RHLLTT
Sbjct: 150 DTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTT 209

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA----NRQPANLSSSVLSSDSMHIGIL 255
           GWS F++ K+L +GD+VLF+R E  +L LG+RRA    N  P     + +SS S     L
Sbjct: 210 GWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQISSTSS----L 265

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           +  AHA A  S F ++YNPR S SEF++P  K+ ++  S   S+GMRF++ +E+E++  R
Sbjct: 266 SEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSF-SQPFSVGMRFKLRYESEDASER 324

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           R  G I G  + DP+ W  S+W+ L V WD+     + N VS WEIE
Sbjct: 325 RRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 370


>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
          Length = 701

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 165/376 (43%), Positives = 228/376 (60%), Gaps = 9/376 (2%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA-SMKKDIDGQIPNYPNL 76
           GGG    + +ELW ACAGPLV LP  G  V YF QGH EQV   S +K +  QI  +  +
Sbjct: 4   GGGRDAELFSELWRACAGPLVELPQPGQRVFYFLQGHLEQVQQPSDQKVLADQIKMF-QV 62

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTL 136
           P K+LC ++NV L A+ ET+EVYAQ+TL P    +           +  +P    F K L
Sbjct: 63  PYKILCRVVNVELKAEVETEEVYAQITLLPEQDQEYLPSSPDPPLPEVRRPVVHSFSKIL 122

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SDTSTHGGFSV RR A +  PPLD SM  P QEL+ +D+  + W F+HIYRGQP+RHL
Sbjct: 123 TPSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHL 182

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ K+L  GD+ +++R E+ +  +G+R   ++   + SSV+SS SMH+G+LA
Sbjct: 183 LTTGWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHLGVLA 242

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
           +A+HA    S F V+Y PR S S+++V + KY+      + ++G+RF+M FE EE   ++
Sbjct: 243 SASHALQTKSIFLVYYRPRVSQSQYIVNVNKYF-LTSKLRYTVGVRFKMSFEGEEVPVKK 301

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV--TAPFFICPPP 374
           + GTI G   L P +W  S+W++ +V WD+        RVS WEIEP    A       P
Sbjct: 302 FSGTIVGDGALSP-QWSCSEWKSKKVQWDDPANCNGPERVSPWEIEPADGAASASTINVP 360

Query: 375 F---FRSKHPRQADDD 387
                R+K PR+  +D
Sbjct: 361 LQSSIRNKRPRETTED 376


>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 750

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 153/306 (50%), Positives = 202/306 (66%), Gaps = 12/306 (3%)

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQTEFFCKT 135
           +N+ L  + +TDEVYAQ+TL P    D       +         L   +  P    FCKT
Sbjct: 1   MNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIHSFCKT 60

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RGQP+RH
Sbjct: 61  LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPRRH 120

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           LL +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA R    + SSV+SS +MH+G+L
Sbjct: 121 LLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHNMHLGVL 180

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           A A HA   +S FTV+Y PR SP+EFVV   +YY+++  N  S+GMRF+M FE EE+  +
Sbjct: 181 ATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRN-YSIGMRFKMRFEGEEAAEQ 239

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPP- 374
           R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P  + P P 
Sbjct: 240 RFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHVNPLPV 299

Query: 375 -FFRSK 379
            F RS+
Sbjct: 300 RFKRSR 305


>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
 gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
          Length = 702

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 167/361 (46%), Positives = 214/361 (59%), Gaps = 31/361 (8%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           GGG    +  ELWHACAGP+  LP  G+ VVY PQGH E +                 +P
Sbjct: 29  GGG---AVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHIGGDADA-------AGAAVP 78

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSY---------------DREALLRSDLAL 122
             +LC +++VTLHAD  TDEVYA+++L P                   DR+       A+
Sbjct: 79  PHVLCRVVDVTLHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDG--EDGAAM 136

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
           K        FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W
Sbjct: 137 KPLARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEW 196

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS 242
            FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R E   L LG+RRA +       
Sbjct: 197 KFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPI 256

Query: 243 SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQ-ISLGM 301
             L +       L   A A A  + F ++YNPR S SEF+VP  K+ +++  NQ IS+GM
Sbjct: 257 PALHNQCSSQTTLGNVAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRSL--NQPISVGM 314

Query: 302 RFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEI 361
           R RM +E++++  RR  G I G  + +P+ W  S+W+ L V WD+       NRVS WEI
Sbjct: 315 RCRMRYESDDASERRCTGIIIGSREAEPI-WYGSKWKCLVVRWDDGIECHWPNRVSPWEI 373

Query: 362 E 362
           E
Sbjct: 374 E 374


>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 597

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 157/370 (42%), Positives = 230/370 (62%), Gaps = 14/370 (3%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K+ +  +LW  CAGPL ++P  G  V YFPQGH E + A  +++++   P + +LPSKL 
Sbjct: 22  KRYMYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELIEAYTREELNKIQPIF-DLPSKLQ 80

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALL--RSDLALKSNKPQTEFFCKTLTAS 139
           C ++ + L  +  +DE YA++TL P    D + ++  ++D      +P    F K LTAS
Sbjct: 81  CRVIAIQLKVEKNSDETYAEITLMP----DTQVVIPTQND---NHYRPLVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS HGGFSVPR+ A +  PPLD S   PAQEL+  DLH N W F+H YRG P+RHLLT+
Sbjct: 134 DTSVHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTS 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F + K+L AGD ++F+R E  +L +GIRRA  Q  N+ SS++S DSM  G++A+A 
Sbjct: 194 GWNAFTTSKKLVAGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDSMRHGVIASAV 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F V Y PR+  S+F+V   K+  AV +N+ ++G RF M FE E+   RRY G
Sbjct: 254 HAFNNQCMFIVVYKPRS--SQFIVSYNKFVDAV-NNKFNVGSRFTMRFEGEDFSERRYSG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G+++     W  S+WR+L+V WDE  +  + ++VS W+IE +T    +  P   ++K
Sbjct: 311 TIIGVNNFSS-HWMESEWRSLEVKWDEFASFPRPDKVSPWDIEHLTPSLNVLRPSLLKNK 369

Query: 380 HPRQADDDAS 389
             R+ ++  S
Sbjct: 370 RSREVNEIGS 379


>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
 gi|224033653|gb|ACN35902.1| unknown [Zea mays]
 gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
 gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
          Length = 708

 Score =  312 bits (800), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 171/365 (46%), Positives = 221/365 (60%), Gaps = 33/365 (9%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           G G +  +  ELWHACAGP+  LP  G+ VVY PQGH E +     +           +P
Sbjct: 24  GPGGRGAVCLELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAAS-----AVP 78

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE------ALLRSDL---------AL 122
             +LC +++VTLHAD  TDEVYA+++L P    D E      A +R D          A+
Sbjct: 79  PHVLCRVVDVTLHADGATDEVYARVSLLP-EDEDAEKRAQAQARVREDEDRRDGEDGGAM 137

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
           +        FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W
Sbjct: 138 RPLARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEW 197

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----QPA 238
            FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R E   L LG+RRA +     P 
Sbjct: 198 KFRHIYRGQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPI 257

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQ-I 297
               +  SS+S     L   A A A  + F ++YNPR + SEF+VP  K+ ++   NQ I
Sbjct: 258 PAPHNQCSSNSN----LGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSF--NQPI 311

Query: 298 SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVS 357
           S+GMR RM +E++++  RR  G I G  + DP+ W  S+W+ L V WD+       NRVS
Sbjct: 312 SVGMRCRMRYESDDASERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVS 370

Query: 358 IWEIE 362
            WEIE
Sbjct: 371 PWEIE 375


>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
          Length = 698

 Score =  312 bits (799), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 171/365 (46%), Positives = 221/365 (60%), Gaps = 33/365 (9%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           G G +  +  ELWHACAGP+  LP  G+ VVY PQGH E +     +           +P
Sbjct: 24  GPGGRGAVCLELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAAS-----AVP 78

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE------ALLRSDL---------AL 122
             +LC +++VTLHAD  TDEVYA+++L P    D E      A +R D          A+
Sbjct: 79  PHVLCRVVDVTLHADGATDEVYARVSLLP-EDEDAEKRAQAQARVREDEDRRDGEDGGAM 137

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
           +        FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W
Sbjct: 138 RPLARTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEW 197

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----QPA 238
            FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R E   L LG+RRA +     P 
Sbjct: 198 KFRHIYRGQPRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPI 257

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQ-I 297
               +  SS+S     L   A A A  + F ++YNPR + SEF+VP  K+ ++   NQ I
Sbjct: 258 PAPHNQCSSNSN----LGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSF--NQPI 311

Query: 298 SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVS 357
           S+GMR RM +E++++  RR  G I G  + DP+ W  S+W+ L V WD+       NRVS
Sbjct: 312 SVGMRCRMRYESDDASERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVS 370

Query: 358 IWEIE 362
            WEIE
Sbjct: 371 PWEIE 375


>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
 gi|238015272|gb|ACR38671.1| unknown [Zea mays]
          Length = 534

 Score =  311 bits (798), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 153/210 (72%), Positives = 175/210 (83%), Gaps = 2/210 (0%)

Query: 173 MARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           MA+DLH N W FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI ++  QLLLGIRR
Sbjct: 1   MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60

Query: 233 ANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAV 292
           ANR    + SSVLSSDSMHIG+LAAAAHAA+ NS FT+FYNPRASPSEFV+PL KY KAV
Sbjct: 61  ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120

Query: 293 HSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK 352
           +  +IS+GMRFRM+FETEES  RRYMGTITGI DLD VRW NS WR+++VGWDESTAGE+
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180

Query: 353 RNRVSIWEIEPVTAPFFICPPPF-FRSKHP 381
           + RVS+WEIEP+T  F + P PF  R K P
Sbjct: 181 QPRVSLWEIEPLTT-FPMYPSPFPLRLKRP 209


>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
          Length = 739

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 153/210 (72%), Positives = 175/210 (83%), Gaps = 2/210 (0%)

Query: 173 MARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           MA+DLH N W FRHI+RGQPKRHLLTTGWS+FVS KRL AGDSVLFI ++  QLLLGIRR
Sbjct: 1   MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60

Query: 233 ANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAV 292
           ANR    + SSVLSSDSMHIG+LAAAAHAA+ NS FT+FYNPRASPSEFV+PL KY KAV
Sbjct: 61  ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120

Query: 293 HSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK 352
           +  +IS+GMRFRM+FETEES  RRYMGTITGI DLD VRW NS WR+++VGWDESTAGE+
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180

Query: 353 RNRVSIWEIEPVTAPFFICPPPF-FRSKHP 381
           + RVS+WEIEP+T  F + P PF  R K P
Sbjct: 181 QPRVSLWEIEPLTT-FPMYPSPFPLRLKRP 209


>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
 gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
 gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
          Length = 605

 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 158/370 (42%), Positives = 223/370 (60%), Gaps = 9/370 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G  V YFPQGH E V AS +++++   P   + PSK
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQP-ICDFPSK 77

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE YA++TL P    D   ++         +P    F K LTAS
Sbjct: 78  LQCRVIAIQLKVENNSDETYAEITLMP----DTTQVVIPTQNQNQFRPLVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS HGGFSVP++ A +  PPLD S   P QE++A DLH N W FRHIYRG  +RHLLT 
Sbjct: 134 DTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTI 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F + K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S +SM  GI+A+A 
Sbjct: 194 GWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAK 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F V Y PR+  S+F+V   K+   V+ N+ ++G RF M FE ++   RR  G
Sbjct: 254 HAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVVN-NKFNVGSRFTMRFEGDDFSERRSFG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G+SD  P  WK S+WR+L+V WDE  +  + N+VS W+IE +T    +    F ++K
Sbjct: 311 TIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVSRSSFLKNK 369

Query: 380 HPRQADDDAS 389
             R+ ++  S
Sbjct: 370 RSREVNEIGS 379


>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
          Length = 811

 Score =  309 bits (792), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 150/245 (61%), Positives = 186/245 (75%), Gaps = 1/245 (0%)

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSVPRRAAE  FPPLD++ Q P+QEL+A+DLH   W FRHIYRGQP+RHLL
Sbjct: 1   ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS+FV  K L +GD+VLF+RDE  +L LGIRRA+RQ + + SSV+SS SMH+G+LAA
Sbjct: 61  TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           AA+A +  S F +FYNPRASP+EF++P  KY K+  S  +S+GMRF+M FETE++  RRY
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSC-SQPLSIGMRFKMRFETEDAAERRY 179

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFR 377
            G ITGI D+DP RW  S+WR+L VGWDE  A E++ RVS WEIEP  +   +  P   R
Sbjct: 180 TGIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPSISVSGLSIPSCSR 239

Query: 378 SKHPR 382
            K  R
Sbjct: 240 IKRLR 244


>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
          Length = 676

 Score =  309 bits (791), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 167/349 (47%), Positives = 225/349 (64%), Gaps = 16/349 (4%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGP V+LP  G+ +VY PQGH         +         P +P  + C +
Sbjct: 23  VCGELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGE----VAGAAPPVPPHVACRV 78

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDRE-----ALLRSDLALKSN--KPQT-EFFCKTL 136
           L+V L AD  TDEVYA++ L  V    R+     A    D+   S   KP+    FCKTL
Sbjct: 79  LDVELCADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKPRMPHMFCKTL 138

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FRHIYRGQP+RHL
Sbjct: 139 TASDTSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHL 198

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIGIL 255
           LTTGWS FV+ K+L +GD+VLF+R    +L LGIRRA + +  +L  +V SSDS     L
Sbjct: 199 LTTGWSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQR-TL 257

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           +A A +  N S F V ++PR+  SEF+VP  K+ K+++ + +S+GMRF++ +E+E++   
Sbjct: 258 SAVASSFRNRSTFHVCFDPRSGASEFIVPYWKFSKSLN-HPLSIGMRFKLSYESEDA-NE 315

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           R  G I+G+S++DP+RW  S+WR L V WD +T    ++R+S WEIE V
Sbjct: 316 RSTGMISGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIERV 364


>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 645

 Score =  309 bits (791), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 162/326 (49%), Positives = 205/326 (62%), Gaps = 19/326 (5%)

Query: 47  VVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQP 106
           VVY PQGH + +        D   P+   +P  + C +++VTLHAD  TDEVYAQ++L P
Sbjct: 1   VVYLPQGHLDHLG-------DAPAPSPAAVPPHVFCRVVDVTLHADASTDEVYAQLSLLP 53

Query: 107 ----VPSYDREALLRSDLALKSNKPQTEF------FCKTLTASDTSTHGGFSVPRRAAEK 156
               V    REA             +  F      FCKTLTASDTSTHGGFSVPRRAAE 
Sbjct: 54  ENEEVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAED 113

Query: 157 IFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSV 216
            FPPLD+S Q P QEL+A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+V
Sbjct: 114 CFPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAV 173

Query: 217 LFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRA 276
           LF+R +  +L LG+RRA +     +   L S   ++G LA  AHA A  S F +FYNPR 
Sbjct: 174 LFLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRL 233

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQ 336
           S SEF+VP  K+ K+  S   S+G RF+M +E+E++  RRY G ITG  D DP+ W+ S+
Sbjct: 234 SQSEFIVPYWKFTKSF-SQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADPM-WRGSK 291

Query: 337 WRNLQVGWDESTAGEKRNRVSIWEIE 362
           W+ L V WD+     + NRVS WEIE
Sbjct: 292 WKCLLVRWDDDGEFRRPNRVSPWEIE 317


>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
          Length = 641

 Score =  308 bits (789), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 155/310 (50%), Positives = 219/310 (70%), Gaps = 6/310 (1%)

Query: 58  VAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLR 117
           + AS  ++++ ++P + NLP K+LC +++  L A+ ++DEVYAQ+TL P  +    +   
Sbjct: 3   LEASTNQELNQKLPLF-NLPPKILCQVVDTRLLAEQDSDEVYAQITLMPEANQALPSTFE 61

Query: 118 SDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDL 177
             L ++  K +   FCK LTASDTSTHGGFSV R+ A +  PPLD + Q P QEL+A+DL
Sbjct: 62  PPL-IECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDL 120

Query: 178 HDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP 237
           H   W F+HI+RGQP+RHLLTTGWS FV+ KRL AGDS +F+R E  +L +G+RR  RQ 
Sbjct: 121 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQ 180

Query: 238 ANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQI 297
           +++ SSV+SS SMH+G+LA A+HA +  + F V+Y PRA  S+F+V L+KY +A+ +N+ 
Sbjct: 181 SSMPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRA--SQFIVSLSKYMEAM-NNKF 237

Query: 298 SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVS 357
            +GMRF+M FE EES  RR+ GTI G+ D+ P  W NS+WR+L+V WDE  + ++ +RVS
Sbjct: 238 MVGMRFKMRFEGEESPERRFSGTIVGVDDMSP-HWPNSEWRSLRVQWDELASIQRPDRVS 296

Query: 358 IWEIEPVTAP 367
            WEIEP  AP
Sbjct: 297 PWEIEPFVAP 306


>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
          Length = 657

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 159/353 (45%), Positives = 217/353 (61%), Gaps = 27/353 (7%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGP+V LP  G+ VVY PQ H    AA    D+         LP  + C +
Sbjct: 24  VCRELWHACAGPIVALPRRGSKVVYLPQAH--LAAAGCGGDV------AVALPPHVACRV 75

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRS-------------DLALKSNKPQTEF 131
           ++V L AD  TDEVYA++ L      + E   R+             D   +      + 
Sbjct: 76  VDVELCADPSTDEVYARLALMA----EGEVFERNMEGGRNEGEDDTEDGDGERKSRMLQM 131

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  F PLD+    P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 132 FCKTLTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQ 191

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +          SS+S  
Sbjct: 192 PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSK 251

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +  L+A A++  + S F + YNPR + SEF+VP  K+ K+++ +   +GMRF++ + +E+
Sbjct: 252 MNALSAVANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLN-HPFCIGMRFKIQYGSED 310

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
              RR  G ITG++++DP+RW  S WR+L V W++ T    +NR+S WEIE V
Sbjct: 311 VNERR-SGMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIEIV 362


>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
          Length = 615

 Score =  306 bits (785), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 155/365 (42%), Positives = 223/365 (61%), Gaps = 9/365 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G +V YFPQG+ E V AS +++++   P   +LPSK
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPSK 77

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE YA++TL P    D   ++    +    +P    F K LTAS
Sbjct: 78  LQCRVIAIHLKVENNSDETYAEITLMP----DTTQVVIPTQSENQFRPLVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS +GGF VP++ A +  PPLD S   PAQEL+A+DLH N W FRH YRG P+RH LTT
Sbjct: 134 DTSAYGGFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQRHSLTT 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F + K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A 
Sbjct: 194 GWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAK 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F V Y PR+  S+F+V   K+  A++ N+  +G RF M FE ++   RRY G
Sbjct: 254 HALDNQCIFIVVYKPRS--SQFIVSYDKFLDAMN-NKFIVGSRFTMRFEGDDFSERRYFG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G++D  P  WK S+WR+L+V WDE  +  + N+VS WEIE + +   +      ++K
Sbjct: 311 TIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSSLLKNK 369

Query: 380 HPRQA 384
             R+ 
Sbjct: 370 RLRET 374


>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
 gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
          Length = 331

 Score =  305 bits (781), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 151/293 (51%), Positives = 204/293 (69%), Gaps = 3/293 (1%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW+ACAGPLV +P  G  V YFPQGH EQVAA + +D    +P Y +LP K+LC +
Sbjct: 1   LYTELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIY-DLPYKILCKV 59

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLR-SDLALKSNKPQTEFFCKTLTASDTST 143
           ++V L A+ +TDEV+A +TL PV   D  +  +  +  L   K +   F K LT SDTST
Sbjct: 60  VHVQLKAEAKTDEVFAHITLLPVAEGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDTST 119

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
            GGFSVP+R AE+  PPLD S QPPAQEL+A+DLH + W FRHIYRGQPKRHLLT GWS 
Sbjct: 120 QGGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGWST 179

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           F+S KR+ AGDS +F+R E  +L +G+RRA +   NLS++V+++ SM +GIL++A+HA +
Sbjct: 180 FISSKRVVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGILSSASHAIS 239

Query: 264 NNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
             S FT+F++P  SP+EF++P  +Y K+    + S+G RF M FE EE   +R
Sbjct: 240 TGSIFTIFFHPWTSPAEFIIPFDQYMKSA-EIEYSIGTRFIMQFEGEECTEQR 291


>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
          Length = 552

 Score =  305 bits (780), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 163/353 (46%), Positives = 208/353 (58%), Gaps = 65/353 (18%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGPL++LP  G+ V+YFPQGH EQ A      I G       LP  + C +
Sbjct: 48  VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQQAPGFSAAIYG-------LPPHVFCRI 100

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRS--------------DLALKSNKPQTE 130
           L+V LHA+T+TDEVYAQ++L P  S D E  LR               ++  +SN P   
Sbjct: 101 LDVKLHAETDTDEVYAQVSLLP-ESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTPH-- 157

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S   P+QEL+ARDLH   W FRHIYRG
Sbjct: 158 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRG 217

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA++     + S   + + 
Sbjct: 218 QPRRHLLTTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGASAFSAQYNQNT 277

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           +    +  AHA + NS F ++YNP++                                  
Sbjct: 278 NHNNFSEVAHAISTNSAFNIYYNPKS---------------------------------- 303

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
                  +G ITGISDLDP+RW  S+WR L V WD++ A   + RVS WEIEP
Sbjct: 304 -------LGIITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIEP 349


>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
          Length = 697

 Score =  304 bits (779), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 165/355 (46%), Positives = 213/355 (60%), Gaps = 26/355 (7%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +  +  ELWHACAGP+  LP  G+ VVY PQGH E +  +              +P  + 
Sbjct: 24  RGAVCLELWHACAGPVGPLPRKGSAVVYLPQGHLEHIGDAGSAAA--------KVPPHVF 75

Query: 82  CILLNVTLHADTETDEVYAQMTL--------QPVPSYDREALLRSDL----ALKSNKPQT 129
           C +++V L AD  TDEVYAQ+TL        + V   + E     D     A+K      
Sbjct: 76  CRVVDVNLQADAATDEVYAQVTLAVDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIP 135

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S+  P+QEL+A+DLH   W FRHIYR
Sbjct: 136 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHIYR 195

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLS--SSVLSS 247
           GQP+RHLLTTGWS FV+ K+L +GD+VLF+R E  +L LG+RR   Q  N+S   +  + 
Sbjct: 196 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVA-QLKNVSPFPAPHNQ 254

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
           D  H   L   AHA A  S F V+YNPR   SEF++P  K+ ++V     S GMRF+M +
Sbjct: 255 DPGH-SSLGNVAHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSV-GQPFSAGMRFKMRY 312

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           E E++  RR  G I G  + DP  +  S+W+ L V WD+   G + NRVS W+IE
Sbjct: 313 ENEDASERRSTGIIIGSRESDPKSY-GSKWKCLVVRWDDDIEGRRPNRVSPWDIE 366


>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 153/368 (41%), Positives = 223/368 (60%), Gaps = 9/368 (2%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           +LW  CAGPL +LP  G  + YFPQGH E + AS K ++D   P++ +LPSKL C + ++
Sbjct: 27  QLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHF-DLPSKLRCCVDDI 85

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L  D  TD+VYA++ L P    D   ++     + + +P    F K LT+SD +THGG 
Sbjct: 86  QLKIDQNTDDVYAEIYLMP----DTTDVITPITTMDNQRPMVYSFSKILTSSDANTHGGL 141

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           S+ +R A +  PPLD S + P Q L+A+DLH   WTF+H +RG P+RHL T+GWSLF + 
Sbjct: 142 SILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFATT 201

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           KRL  GD+ +F+R E  +L +GIRRA  Q  +  S V+S+  M  G++A+  +A  +   
Sbjct: 202 KRLIVGDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVIASVVNAFKSKCK 261

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           F V Y P  S S+FVV   K+  A++ N+  +G RFRM FE ++   +RY GTI G++D+
Sbjct: 262 FIVVYKP--SSSQFVVNYDKFVDAMN-NKFIVGSRFRMRFEGQDFSEKRYSGTIIGVNDM 318

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQADDD 387
            P  WK+S+WR+LQV WDE +   + ++VS WEIE +     I  P   + K  RQ ++ 
Sbjct: 319 SP-HWKDSEWRSLQVQWDELSPFPRPDKVSPWEIEHLIPSSSISQPTVLQKKRARQCNEI 377

Query: 388 ASDLDNVF 395
            S   N+ 
Sbjct: 378 GSTSSNLL 385


>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
          Length = 593

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 157/368 (42%), Positives = 223/368 (60%), Gaps = 9/368 (2%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW  CAGPL ++P  G  V YFPQG+ E V AS +++++   P   +LPSKL 
Sbjct: 21  KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQ 79

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++ + L  +  +DE YA++TL P    D   ++         +P    F K LTASD 
Sbjct: 80  CRVIAIHLKVENNSDETYAKITLMP----DTTQVVIPTQNENQFRPLVNSFTKVLTASDI 135

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           S +G FSVP++ A +  PPLD S   PAQEL+A DLH N W+FRH YRG P+RHLLTTGW
Sbjct: 136 SANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGW 195

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           + F + K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A HA
Sbjct: 196 NEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHA 255

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
             N   F V Y PR+  S+F+V   K+  AV+ N+ ++G RF M FE ++   RRY GTI
Sbjct: 256 FDNQCMFIVVYKPRS--SQFIVSYDKFLDAVN-NKFNVGSRFTMRFEGDDLSERRYFGTI 312

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
            G+S+  P  WK S WR+L+V WDE  +  + N+VS WEIE +     +    F ++K  
Sbjct: 313 IGVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVPRSSFLKNKRL 371

Query: 382 RQADDDAS 389
           R+ ++  S
Sbjct: 372 REVNEFGS 379


>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
          Length = 620

 Score =  302 bits (774), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 156/370 (42%), Positives = 224/370 (60%), Gaps = 17/370 (4%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           +LW  CAGPL ++P  G +V YFPQG+ E   AS +++++   P   +LPSKL C ++ +
Sbjct: 4   QLWKLCAGPLCDIPKLGENVYYFPQGNIE--LASTREELNELQP-ICDLPSKLQCRVIAI 60

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGF 147
            L  +  +DE+YA++TL P    D   ++    +    +P    F K LTASDTS +GGF
Sbjct: 61  HLKVENNSDEIYAEITLMP----DTTQVVIPTQSENRFRPLVNSFTKVLTASDTSAYGGF 116

Query: 148 SVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSG 207
           SVP++ A +  PPLD S   PAQE++A DLHDN W FRH YRG P+RH LTTGW+ F++ 
Sbjct: 117 SVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITS 176

Query: 208 KRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A HA  N   
Sbjct: 177 KKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCI 236

Query: 268 FTVFYNPR--------ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           F V Y PR           S+F+V   K+  AV+ N+ ++G RF M FE ++   RRY G
Sbjct: 237 FIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAVN-NKFNVGSRFTMRFEGDDFSERRYFG 295

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G+SD  P  WK S+WR+L+V WDE  +  + N+VS WEIE +     +      ++K
Sbjct: 296 TIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLVPALNVPRSSLLKNK 354

Query: 380 HPRQADDDAS 389
             R+ ++  S
Sbjct: 355 RLREVNEFGS 364


>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
          Length = 570

 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 156/365 (42%), Positives = 222/365 (60%), Gaps = 9/365 (2%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW  CAGPL ++P  G  V YFPQG+ E V AS +++++   P   +LPSKL 
Sbjct: 21  KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQ 79

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++ + L  +  +DE YA++TL P    D   ++         +P    F K LTASD 
Sbjct: 80  CRVIAIHLKVENNSDETYAKITLMP----DTTQVVIPTQNENQFRPLVNSFTKVLTASDI 135

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           S +G FSVP++ A +  PPLD S   PAQEL+A DLH N W+FRH YRG P+RHLLTTGW
Sbjct: 136 SANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGW 195

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           + F + K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A HA
Sbjct: 196 NEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHA 255

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
             N   F V Y PR+  S+F+V   K+  AV+ N+ ++G RF M FE ++   RRY GTI
Sbjct: 256 FDNQCMFIVVYKPRS--SQFIVSYDKFLDAVN-NKFNVGSRFTMRFEGDDLSERRYFGTI 312

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHP 381
            G+S+  P  WK S WR+L+V WDE  +  + N+VS WEIE +     +    F ++K  
Sbjct: 313 IGVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVPRSSFLKNKRL 371

Query: 382 RQADD 386
           R+ ++
Sbjct: 372 REVNE 376


>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
 gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
 gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
 gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
 gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
          Length = 593

 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 160/371 (43%), Positives = 222/371 (59%), Gaps = 11/371 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G  V YFPQGH E V  S +++++   P   +LPSK
Sbjct: 19  GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQP-ICDLPSK 77

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE YA++TL P    D   ++         +P    F K LTAS
Sbjct: 78  LQCRVIAIHLKVENNSDETYAEITLMP----DTTQVVIPTQNENQFRPLVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS HGGF VP++ A +  P LD S   PAQEL+A DLH N W F H YRG P+RHLLTT
Sbjct: 134 DTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTT 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F + K+L AGD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A 
Sbjct: 194 GWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAK 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   FTV Y PR+  S+F+V   K+  AV+ N+ ++G RF M  E ++   RR  G
Sbjct: 254 HAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAVN-NKFNVGSRFTMRLEGDDFSERRCFG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRS 378
           TI G+SD  P  WK S+WR+L+V WDE T+     +VS W+IE +  P    P  F  ++
Sbjct: 311 TIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL-MPAINVPRSFLLKN 368

Query: 379 KHPRQADDDAS 389
           K  R+ ++  S
Sbjct: 369 KRLREVNEIGS 379


>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
 gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
          Length = 598

 Score =  301 bits (772), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 157/371 (42%), Positives = 226/371 (60%), Gaps = 10/371 (2%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW  CAGPL ++P  G  V YFPQG+ E V AS +++++   P   +LPSKL 
Sbjct: 21  KSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQP-ICDLPSKLQ 79

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN---KPQTEFFCKTLTA 138
           C ++ + L  +  +DE YA++TL P  +      L+  +  ++    +P    F K LTA
Sbjct: 80  CRVIAIHLKVENNSDETYAKITLMPDTTVSEN--LQVVIPTQNENQFRPLVNSFTKVLTA 137

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD S +G FSVP++ A +  PPLD S   PAQEL+A DLH N W+FRH YRG P+RHLLT
Sbjct: 138 SDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLT 197

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           TGW+ F + K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A
Sbjct: 198 TGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASA 257

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
            HA  N   F V Y PR+  S+F+V   K+  AV+ N+ ++G RF M FE ++   RRY 
Sbjct: 258 KHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVN-NKFNVGSRFTMRFEGDDLSERRYF 314

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GTI G+S+  P  WK S WR+L+V WDE  +  + N+VS WEIE +     +    F ++
Sbjct: 315 GTIIGVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHLMPALNVPRSSFLKN 373

Query: 379 KHPRQADDDAS 389
           K  R+ ++  S
Sbjct: 374 KRLREVNEFGS 384


>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
 gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
          Length = 680

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 158/347 (45%), Positives = 218/347 (62%), Gaps = 16/347 (4%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACAG  V LP  G+ VVY PQ H   +AA       G  P  P +P  ++C +++V
Sbjct: 20  ELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGGLAPAPPRVPPHVVCRVVDV 76

Query: 88  TLHADTETDEVYAQMTLQPVPS-YDRE--------ALLRSDLALKSNKPQTEFFCKTLTA 138
            L AD  TDEVYA++ L  + + + R              +      K  +  FCKTLTA
Sbjct: 77  ELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLTA 136

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FRHIYRGQP+RHLLT
Sbjct: 137 SDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLT 196

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIGILAA 257
           TGWS F++ K+L +GD+VLF+R    +L LG+RRA + +   L  +V  +DS  + +L+A
Sbjct: 197 TGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLL-MLSA 255

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
            A++  N S F + +NPR   SEF+VP  K+ K++ +   S+G RF++  E E++  R +
Sbjct: 256 VANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYHFSVGTRFKVGCENEDANERSF 314

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            G I GIS++DP+ W  S+W++L + WD +T    +NRVS W+IE V
Sbjct: 315 -GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGV 360


>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 648

 Score =  301 bits (771), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 153/350 (43%), Positives = 214/350 (61%), Gaps = 21/350 (6%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  +LWHACAGP+V LP  G+ +VY PQ H           +         LP  + C +
Sbjct: 20  VCRDLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDAPV--------GLPPHVACRV 71

Query: 85  LNVTLHADTETDEVYAQMTLQPVPS----------YDREALLRSDLALKSNKPQTEFFCK 134
           ++V L AD  TDEVYA++ L               ++ E  +  D+  +        FCK
Sbjct: 72  VDVELCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDM-EDVDGERKSRMLHMFCK 130

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 131 TLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRR 190

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +          +S+S  I  
Sbjct: 191 HLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHT 250

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           L+A  ++  + S F + YNPRA+ SEF+VP  K+ K+++     +GMRF++ + +E+   
Sbjct: 251 LSAVVNSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLN-RPFCIGMRFKIQYGSEDVNE 309

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           RR  G ITGI+++DP+RW  S+W++L V W++      +NR+S WEIE V
Sbjct: 310 RR-SGMITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIEIV 358


>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
 gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
          Length = 680

 Score =  301 bits (770), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 157/351 (44%), Positives = 218/351 (62%), Gaps = 16/351 (4%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAG  V LP  G+ VVY PQ H   +AA          P  P +P  ++C 
Sbjct: 16  AVCAELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGVSAPAPPRVPPHVVCR 72

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPS-YDRE--------ALLRSDLALKSNKPQTEFFCK 134
           +++V L AD  TDEVYA++ L  + + + R              +      K  +  FCK
Sbjct: 73  VVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCK 132

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 133 TLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRR 192

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIG 253
           HLLTTGWS F++ K+L +GD+VLF+R    +L LG+RRA + +   L  +V  +DS  + 
Sbjct: 193 HLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLL- 251

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +L+A A++  N S F + +NPR   SEF+VP  K+ K++ +   S+G RF++  E E++ 
Sbjct: 252 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYHFSVGTRFKVGCENEDAN 310

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            R + G I GIS++DP+ W  S+W++L + WD +T    +NRVS W+IE V
Sbjct: 311 ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGV 360


>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
          Length = 775

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 144/252 (57%), Positives = 190/252 (75%), Gaps = 1/252 (0%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSV RR A++  PPLD + QPPAQEL+A+DLH   W FRHI+RGQ
Sbjct: 18  FCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHFRHIFRGQ 77

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS+FVS KRL AGD+ +F+R +  +L +G+RRA RQ  N+SSSV+SS SMH
Sbjct: 78  PRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVSSSVISSHSMH 137

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           +G++A A+HA + ++ FTV+Y PR SPS F++P  KY +A+++N  S+GMRF+M FE EE
Sbjct: 138 LGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAMNNN-FSVGMRFKMRFEGEE 196

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFIC 371
           +  +R++GTI G  D DPVRW  S+WR+L+V WDE +   +  RVS WEIE +     + 
Sbjct: 197 APEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIELIATAAALS 256

Query: 372 PPPFFRSKHPRQ 383
           P P  R+K PR+
Sbjct: 257 PLPVSRNKRPRE 268


>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
          Length = 680

 Score =  301 bits (770), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 157/357 (43%), Positives = 220/357 (61%), Gaps = 16/357 (4%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAG  V LP  G+ VVY PQ H   +AA          P  P +P  ++C 
Sbjct: 16  AVCAELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGMSAPAPPRVPPHVVCR 72

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPS-YDRE--------ALLRSDLALKSNKPQTEFFCK 134
           +++V L AD  TDEVYA++ L  + + + R              +      K  +  FCK
Sbjct: 73  VVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCK 132

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 133 TLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRR 192

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIG 253
           HLLTTGWS F++ K+L +GD+VLF+R    +L LG+RRA + +   L  +V  +DS  + 
Sbjct: 193 HLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLL- 251

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +L+A A++  N S F + +NPR   SEF+VP  K+ K++ +   S+G RF++  E E++ 
Sbjct: 252 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYPFSVGTRFKVGCENEDAN 310

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
            R + G I GIS++DP+ W  S+W++L + WD +T    +NRVS W+IE V +   +
Sbjct: 311 ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVLV 366


>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
 gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
 gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
 gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
          Length = 590

 Score =  300 bits (769), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 152/372 (40%), Positives = 223/372 (59%), Gaps = 11/372 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G +V YFPQG+ E V AS +++++   P   +LPSK
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQP-ICDLPSK 77

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE YA++TL P    D   ++    +    +P    F K LTAS
Sbjct: 78  LQCRVIAIHLKVENNSDETYAEITLMP----DTTQVVIPTQSENQFRPLVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS +GGF VP++ A +  PPL      PAQEL+A+DLH N W FRH YRG P+RH LTT
Sbjct: 134 DTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTT 189

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F + K+L  GD ++F+R E  +L +GIRRA  Q  N+ SS++S D M  G++A+A 
Sbjct: 190 GWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAK 249

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F V Y P    S+F+V   K+  A++ N+  +G RF M FE ++   RRY G
Sbjct: 250 HALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMN-NKFIVGSRFTMRFEGDDFSERRYFG 308

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G++D  P  WK S+WR+L+V WDE  +  + N+VS WEIE + +   +      ++K
Sbjct: 309 TIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSSLLKNK 367

Query: 380 HPRQADDDASDL 391
             R+ ++   ++
Sbjct: 368 RLREVNEFGQEI 379


>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
 gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
          Length = 779

 Score =  300 bits (768), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 171/393 (43%), Positives = 224/393 (56%), Gaps = 55/393 (13%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK ++++LWHACAG +V LP  G  V+YFPQGH EQ AA         IP++P     +L
Sbjct: 19  KKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTIL 69

Query: 82  CILLNVTLHADTETDEVYAQMTLQP----VPSY-----DREALLRSDLALKSNKPQTEFF 132
           C +++V   AD ETDEVYA+M LQP     P +     D E L+ S   ++  KP +  F
Sbjct: 70  CRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVE--KPAS--F 125

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            KTLT SD +  GGFSVPR  AE IFP LD+S+ PP Q ++A+D+H  IW FRHIYRG P
Sbjct: 126 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTP 185

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV-------- 244
           +RHLLTTGWS FV+ K+L AGD+++F+R    +L +G+RR+ R P N  S +        
Sbjct: 186 RRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPGQ 245

Query: 245 ------LSSDSMHIGILAAAAHAAANNSP--------------FTVFYNPRASPSEFVVP 284
                 LS +       + A + A   S               F V Y PRAS +EF V 
Sbjct: 246 SGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFEVVYYPRASTAEFCV- 304

Query: 285 LAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVG 343
            A   KA   +    GMRF+M FETE+S     +MGTI+ +   DP+RW +S WR LQV 
Sbjct: 305 RASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPADPIRWPSSPWRILQVS 364

Query: 344 WDESTAGEKRNRVSIWEIEPV-TAPFFICPPPF 375
           WDE    +  NRVS W++E V T P  +  PPF
Sbjct: 365 WDEPDLLQGVNRVSPWQVELVSTLPMQL--PPF 395


>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 697

 Score =  300 bits (767), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 162/365 (44%), Positives = 224/365 (61%), Gaps = 23/365 (6%)

Query: 13  NSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP- 71
           N+ E  G     +  ELWHACAGP V LP  G+ VVY PQ H   +AA       G  P 
Sbjct: 6   NTVEEDGETAGAVCGELWHACAGPGVALPRRGSAVVYLPQAH---LAAG-----GGDAPA 57

Query: 72  --NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLR-------SDLAL 122
                ++P  + C ++ V L AD  TDEVYA++ L       R+++          ++A 
Sbjct: 58  PAGRAHVPPHVACRVVGVELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMAA 117

Query: 123 K--SNKPQT-EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHD 179
               NKP+    FCKTLTASDTSTHGGFSVPRRAAE  F  LD+    P+QEL+A+DLH 
Sbjct: 118 GDGENKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHG 177

Query: 180 NIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPAN 239
             W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +    
Sbjct: 178 TQWRFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRNE 237

Query: 240 LSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISL 299
                ++++   +  L+A A +  N S F V ++PR+  SEF+VP  ++ K+++ +  S+
Sbjct: 238 ALFEAVNTNDSKLHTLSAVASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLN-HTFSI 296

Query: 300 GMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIW 359
           GMRF++  E++++   R  G I+GIS++DP+RW  S+WR L V WD+ST    + RVS W
Sbjct: 297 GMRFKVSNESDDA-NERSTGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPW 355

Query: 360 EIEPV 364
           EIE V
Sbjct: 356 EIERV 360


>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
          Length = 680

 Score =  300 bits (767), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 158/351 (45%), Positives = 220/351 (62%), Gaps = 16/351 (4%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            +  ELWHACAG  V LP  G+ VVY PQ H   +AA          P  P +P  ++C 
Sbjct: 16  AVCAELWHACAGAGVALPRRGSAVVYLPQAH---LAAGGCDGGGMSAPAPPRVPPHVVCR 72

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSY------DREALLRSDLALKSN---KPQTEFFCK 134
           +++V L AD  TDEVYA++ L  + +       D E   ++      +   K  +  FCK
Sbjct: 73  VVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCK 132

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FRHIYRGQP+R
Sbjct: 133 TLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRR 192

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSMHIG 253
           HLLTTGWS F++ K+L +GD+VLF+R    +L LG+RRA + +   L  +V  +DS  + 
Sbjct: 193 HLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLL- 251

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +L+A A++  N S F + +NPR   SEF+VP  K+ K++ +   S+G RF++  E E++ 
Sbjct: 252 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSL-NYPFSVGTRFKVGCENEDAN 310

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            R + G I GIS++DP+ W  S+W++L + WD +T    +NRVS W+IE V
Sbjct: 311 ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGV 360


>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
          Length = 687

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 166/357 (46%), Positives = 218/357 (61%), Gaps = 30/357 (8%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  ELWHACAGP V LP  G+ +VY PQ H     A+     +        +P  + C +
Sbjct: 20  VCGELWHACAGPGVALPRRGSALVYLPQAH----LAADGGGGEVPPAGAAAVPPHVACRV 75

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLR----------------SDLALKSNKPQ 128
           + V L AD  TDEVYA++ L      + E L R                 D   K   P 
Sbjct: 76  VGVELRADAATDEVYARLALVA----EGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPH 131

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A DLH   W FRHIY
Sbjct: 132 --MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIY 189

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSS 247
           RGQP+RHLLT GWS FV+ K+L +GD+VLF+R +  QL LG+RRA + +   L   V SS
Sbjct: 190 RGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSS 249

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
           DS  + IL++ A +  N S F + +NPR+  SEF+VP  +  K++ ++  S+GMRFR+ +
Sbjct: 250 DS-KLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSL-NHPFSIGMRFRVCY 307

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           E+E++   R  G I+GIS++DP+RW  S+W+ L V WD+ST    +NRVS WEIE V
Sbjct: 308 ESEDA-NERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERV 363


>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
          Length = 668

 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 162/356 (45%), Positives = 217/356 (60%), Gaps = 18/356 (5%)

Query: 19  GGEKKT-----INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           GGE+       +  +LWHACAGP+V+LP  G+ VVY PQGH     A     I G++   
Sbjct: 11  GGEEDAPAPGPVCRDLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGG--IRGEVA-- 66

Query: 74  PNLPSKLLCILLNVTLHADTETDEV-----YAQMTLQPVPSYDREALLRSDLALKSNKPQ 128
             LP  + C +++V L        V     Y + TL        + +   D   KS    
Sbjct: 67  VALPPHVACRVVDVELCVSEPLSLVVGFSLYLRGTLHGGGIEREDDMEDGDEERKSR--M 124

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSVPRRAAE  FPPLD     P+QEL+A+DLH   W FRHIY
Sbjct: 125 LHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIY 184

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +          SS+
Sbjct: 185 RGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSE 244

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
           S  +  L+A A +  + S F + YNPRA+ SE+VVP  K+ K+ + + + +GMRF+  FE
Sbjct: 245 SSKMRTLSAVADSLKHGSVFHICYNPRATASEYVVPYWKFVKSFN-HPVCIGMRFKFHFE 303

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           +E+   RR  G I G+S++DP+RW  S+WR+L V W+++T    +NRVS WEIE V
Sbjct: 304 SEDVNERR-SGMIAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIV 358


>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
 gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
          Length = 835

 Score =  298 bits (764), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 172/408 (42%), Positives = 229/408 (56%), Gaps = 70/408 (17%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           KK ++++LWHACAG +V LP  G  V+YFPQGH EQ AA         IP++P     +L
Sbjct: 60  KKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAA---------IPDFPRSGGTIL 110

Query: 82  CILLNVTLHADTETDEVYAQMTLQP----VPSY-----DREALLRSDLALKSNKPQTEFF 132
           C +++V   AD ETDEVYA+M LQP     P +     D E L+ S   ++  KP +  F
Sbjct: 111 CRVISVDFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEELVSSPTVVE--KPAS--F 166

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            KTLT SD +  GGFSVPR  AE IFP LD+S+ PP Q ++A+D+H  IW FRHIYRG P
Sbjct: 167 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTP 226

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV-------- 244
           +RHLLTTGWS FV+ K+L AGD+++F+R    +L +G+RR+ R P N  S +        
Sbjct: 227 RRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGISWHSSPGQ 286

Query: 245 -----------LSSDSMHIGILA------AAAHAAANNS------------------PFT 269
                      + S+S +  +L+      + A  A N +                   F 
Sbjct: 287 RSLPQNSSRWEIKSESGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQAFE 346

Query: 270 VFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLD 328
           V Y PRAS +EF V  A   KA   +    GMRF+M FETE+S     +MGTI+ +   D
Sbjct: 347 VVYYPRASTAEFCV-RASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQPAD 405

Query: 329 PVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV-TAPFFICPPPF 375
           P+RW +S WR LQV WDE    +  NRVS W++E V T P  +  PPF
Sbjct: 406 PIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVELVSTLPMQL--PPF 451


>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
          Length = 600

 Score =  298 bits (764), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 158/370 (42%), Positives = 222/370 (60%), Gaps = 9/370 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G  + YFPQG+ E V AS +++++   P   +LPSK
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPSK 77

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE YA++TL P    D   ++         +P    F K LTAS
Sbjct: 78  LQCRVIAIQLKVENNSDETYAEITLMP----DTTQVVIPTQNENQFRPLVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS  GGF VP++ A +  PPLD S   P QEL+A DLH N W F H YRG P+RHLLTT
Sbjct: 134 DTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTT 191

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F + K+L AGD ++F+R E  +L +GIRRA  Q  N+ SS++S +SM  G++A+A 
Sbjct: 192 GWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAK 251

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F V Y P    S+F+V   K+  AV+ N+ ++G RF M FE ++   RRY G
Sbjct: 252 HAFDNQCMFIVVYKPSIRSSQFIVSYDKFLDAVN-NKFNVGSRFTMRFEGDDFSERRYFG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G+SD  P  WK S+WRNL+V WDE  +  + N+VS WEIE +     +  P   ++K
Sbjct: 311 TIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPALNVPRPSLLKNK 369

Query: 380 HPRQADDDAS 389
             R+ ++  S
Sbjct: 370 RLREVNEIGS 379


>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
 gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
 gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
 gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
          Length = 598

 Score =  298 bits (762), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 159/370 (42%), Positives = 224/370 (60%), Gaps = 11/370 (2%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G  + YFPQG+ E V AS +++++   P   +LPSK
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKP-ICDLPSK 77

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE YA++TL P    D   ++         +P    F K LTAS
Sbjct: 78  LQCRVIAIQLKVENNSDETYAEITLMP----DTTQVVIPTQNENQFRPLVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS  GGF VP++ A +  PPLD S   P QEL+A DLH N W F H YRG P+RHLLTT
Sbjct: 134 DTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTT 191

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW+ F + K+L AGD ++F+R E  +L +GIRRA  Q  N+ SS++S +SM  G++A+A 
Sbjct: 192 GWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAK 251

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F V Y PR+  S+F+V   K+  AV+ N+ ++G RF M FE ++   RRY G
Sbjct: 252 HAFDNQCMFIVVYKPRS--SQFIVSYDKFLDAVN-NKFNVGSRFTMRFEGDDFSERRYFG 308

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G+SD  P  WK S+WRNL+V WDE  +  + N+VS WEIE +     +  P   ++K
Sbjct: 309 TIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPALNVPRPSLLKNK 367

Query: 380 HPRQADDDAS 389
             R+ ++  S
Sbjct: 368 RLREVNEIGS 377


>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
          Length = 662

 Score =  297 bits (761), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 147/311 (47%), Positives = 204/311 (65%), Gaps = 5/311 (1%)

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKT 135
           +P K+LC ++NV L A+TETDEV+AQ+TLQP P  +    L      +  +P    FCK 
Sbjct: 29  VPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPLPEQPRPVVHSFCKI 88

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SDTSTHGGFSV RR A +  PPLD SM  P QEL+ +DLH + W F+HIYRGQP+RH
Sbjct: 89  LTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRH 148

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           LLTTGWS FV+ K+L +GD+ +++R E  +  +G+RR  ++ + + +SV+SS SMH+G+L
Sbjct: 149 LLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGVL 208

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
           A+A+HA   NS F V+Y PR S S+++V + KY  A      ++GMRF+M FE E+   +
Sbjct: 209 ASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVG-FNVGMRFKMSFEGEDVPVK 267

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV--TAPFFICP- 372
           ++ GTI G  DL  ++W  S+W++L+V WDE T      RVS WEIE    TAP    P 
Sbjct: 268 KFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPL 326

Query: 373 PPFFRSKHPRQ 383
               ++K PR+
Sbjct: 327 QSATKNKRPRE 337


>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  295 bits (754), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 158/362 (43%), Positives = 207/362 (57%), Gaps = 20/362 (5%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G+   S E G    K +N +LWHACAG +V +P   + V YFPQGH+E   AS+      
Sbjct: 6   GSKEKSKEAG----KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASV------ 55

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV----PSYDREALLRSDLALKS 124
              NYP +P+ + C +  +   AD E+DEVYA++TL P+      YD +     +     
Sbjct: 56  DFRNYPRIPAYIPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGY--GNGTESQ 113

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            KP +  F KTLT SD +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W F
Sbjct: 114 EKPAS--FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKF 171

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSV 244
           RHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R     + S 
Sbjct: 172 RHIYRGTPRRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSF 231

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
                +    +  A   A N  PF V Y PRAS  EF V  +   K+    +   GMRF+
Sbjct: 232 FGRVKVTAEAVIEAVRLAVNGQPFEVIYYPRASTPEFCVK-SSLVKSASQIRWCSGMRFK 290

Query: 305 MMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           M FETE+S     +MGTI+ +   DPVRW +S WR LQV WDE    +   RVS W +E 
Sbjct: 291 MAFETEDSSRISWFMGTISSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVEL 350

Query: 364 VT 365
           V+
Sbjct: 351 VS 352


>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
          Length = 686

 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 158/370 (42%), Positives = 214/370 (57%), Gaps = 31/370 (8%)

Query: 9   GAASNSGEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           G   N  +G G E++       ELWHACAGP+V LP  G+ VVY PQGH           
Sbjct: 2   GIDLNMVDGEGHERRPPPVTCRELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA 61

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS------- 118
                    +LP  ++C + +V L AD  TDEV A++ L      + EA  R+       
Sbjct: 62  ---------DLPPHVVCRVADVELCADAATDEVCARLALVA----EGEAFGRNLGGGGVE 108

Query: 119 ------DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL 172
                 D   +        FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL
Sbjct: 109 GDDGMEDFDAERKSGMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQEL 168

Query: 173 MARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           +A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RR
Sbjct: 169 VAKDLHGAKWKFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRR 228

Query: 233 ANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAV 292
           A +          +SDS     L A A +  N S F + YNPRA+ SE+++P AK+ K++
Sbjct: 229 AIQLKNEALFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSL 288

Query: 293 HSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK 352
           + + + +G R       E+   RR  G +  IS++DP++W  S+WR+L V W++      
Sbjct: 289 N-HPVCIGARINFQCHNEDVSERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNG 346

Query: 353 RNRVSIWEIE 362
           ++RVS WEIE
Sbjct: 347 QDRVSPWEIE 356


>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 683

 Score =  293 bits (749), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 158/370 (42%), Positives = 214/370 (57%), Gaps = 31/370 (8%)

Query: 9   GAASNSGEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           G   N  +G G E++       ELWHACAGP+V LP  G+ VVY PQGH           
Sbjct: 2   GIDLNMVDGEGHERRPPPVTCRELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA 61

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS------- 118
                    +LP  ++C + +V L AD  TDEV A++ L      + EA  R+       
Sbjct: 62  ---------DLPPHVVCRVADVELCADAATDEVCARLALVA----EGEAFGRNLGGGGVE 108

Query: 119 ------DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL 172
                 D   +        FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL
Sbjct: 109 GDDGMEDFDAERKSGMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQEL 168

Query: 173 MARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           +A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RR
Sbjct: 169 VAKDLHGAKWKFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRR 228

Query: 233 ANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAV 292
           A +          +SDS     L A A +  N S F + YNPRA+ SE+++P AK+ K++
Sbjct: 229 AIQLKNEALFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSL 288

Query: 293 HSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK 352
           + + + +G R       E+   RR  G +  IS++DP++W  S+WR+L V W++      
Sbjct: 289 N-HPVCIGARINFQCHNEDVSERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNG 346

Query: 353 RNRVSIWEIE 362
           ++RVS WEIE
Sbjct: 347 QDRVSPWEIE 356


>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
 gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
          Length = 702

 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 165/390 (42%), Positives = 212/390 (54%), Gaps = 55/390 (14%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++++LWHACAG +V +PA  T V YFPQGH+E  + S+         N+P LP  +L
Sbjct: 17  EKCLDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSV------DFRNFPRLPPYIL 70

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSY-----DREALLRSDLALKSNKPQTEFFCKTL 136
           C +  +   AD ETDEVYA++ L P+ S      D E  + +    + NKP +  F KTL
Sbjct: 71  CRVSGIKFMADPETDEVYAKIKLTPICSKENGMEDEEEGVINGGEGQENKPAS--FAKTL 128

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RHL
Sbjct: 129 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHL 188

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------------QPA 238
           LTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R                   P 
Sbjct: 189 LTTGWSTFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGNCVMPY 248

Query: 239 NLSSSVLSSDSMHI-----------------GILAA-----AAHAAANNSPFTVFYNPRA 276
              +S    D   +                 G + A     AA  AAN  PF V Y PRA
Sbjct: 249 GGFNSFFREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVYYPRA 308

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNS 335
           S  EF V  A   KA    +   GMRF+M FETE+S     +MGTI  +   DP+RW +S
Sbjct: 309 STPEFCVK-ASMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPDS 367

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            WR LQV WDE    +   RVS W +E V+
Sbjct: 368 PWRLLQVTWDEPDLLQNVKRVSPWLVELVS 397


>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 393

 Score =  290 bits (743), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 158/370 (42%), Positives = 214/370 (57%), Gaps = 31/370 (8%)

Query: 9   GAASNSGEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           G   N  +G G E++       ELWHACAGP+V LP  G+ VVY PQGH           
Sbjct: 2   GIDLNMVDGEGHERRPPPVTCRELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA 61

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS------- 118
                    +LP  ++C + +V L AD  TDEV A++ L      + EA  R+       
Sbjct: 62  ---------DLPPHVVCRVADVELCADAATDEVCARLALVA----EGEAFGRNLGGGGVE 108

Query: 119 ------DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL 172
                 D   +        FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL
Sbjct: 109 GDDGMEDFDAERKSGMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQEL 168

Query: 173 MARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           +A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RR
Sbjct: 169 VAKDLHGAKWKFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRR 228

Query: 233 ANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAV 292
           A +          +SDS     L A A +  N S F + YNPRA+ SE+++P AK+ K++
Sbjct: 229 AIQLKNEALFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSL 288

Query: 293 HSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK 352
            ++ + +G R       E+   RR  G +  IS++DP++W  S+WR+L V W++      
Sbjct: 289 -NHPVCIGARINFQCHNEDVSERR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNG 346

Query: 353 RNRVSIWEIE 362
           ++RVS WEIE
Sbjct: 347 QDRVSPWEIE 356


>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
          Length = 744

 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 164/360 (45%), Positives = 202/360 (56%), Gaps = 40/360 (11%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK---KDIDGQIPNYPNLPSKLL 81
           I  ELWH CAG L +LP  G  VVYFPQGH EQ A+S      DI        +LP ++ 
Sbjct: 52  IYLELWHVCAGRLTSLPKKGNVVVYFPQGHLEQAASSSPFPPMDISTF-----DLPPQIF 106

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL----------ALKSNKPQTEF 131
           C ++NV L A+ E DEVY Q+TL P P      L   +L               K     
Sbjct: 107 CRVVNVQLLANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHM 166

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 167 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 226

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS+FVS K L +GD+VLF+R E  +L LGIRRA R    L  S++ + + +
Sbjct: 227 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSY 286

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG-----MRFRMM 306
             +L+ AA+A A  S F                L  + K  H N +  G        +M+
Sbjct: 287 PNVLSLAANAVATKSMFH--------------GLKVFNKQTHLNMLQDGNQVNKFFLKML 332

Query: 307 FETEESGTRRYM---GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
            E             G +TGI DLDP RW NS+WR L V WD+    + + RVS WEI+P
Sbjct: 333 PEIHNLQNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDP 392


>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
 gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
 gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 505

 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 157/412 (38%), Positives = 238/412 (57%), Gaps = 23/412 (5%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW+ CAGPL  LP  G  V YFPQGH E +  S + ++D   P + +LPSKL 
Sbjct: 19  KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLR 77

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++ +    D  TDEVYAQ++L P    D   ++  +  + + +P   FF K LTASD 
Sbjct: 78  CRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYFFSKILTASDV 133

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT-- 199
           S  GG  +P++ A + FPPLD S     Q L+A+DL+   W+F+H++RG P+RH+ T+  
Sbjct: 134 SLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGG 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+F + KRL  GD  + +R E  +L  GIRRA  Q  ++ SSV+S++ M  G++A+  
Sbjct: 194 GWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVV 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           +A      F V Y P  S S+FV+   K+  A+++N I +G RFRM FE ++   +RY G
Sbjct: 254 NAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +     I      + K
Sbjct: 311 TIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDISQSSLKKKK 369

Query: 380 HPRQADDDASDLDNVF------KRTM------PWIGDDFGVKDSQSLPGLSL 419
           H  Q ++  + L N++      +R+M      P       ++DS+ L GL L
Sbjct: 370 HWLQLNEIGATLSNLWTCQEIGQRSMNSPISVPEFSYPNAIEDSKFLSGLLL 421


>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
 gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
          Length = 688

 Score =  288 bits (738), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 156/366 (42%), Positives = 217/366 (59%), Gaps = 31/366 (8%)

Query: 13  NSGEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           N  +G   E++    +  ELWHACAGP+V LP  G+ VVY PQGH   +AA+   ++   
Sbjct: 6   NMADGESQERRPPPAVCRELWHACAGPVVALPRRGSLVVYLPQGH---LAAAGGGNV--- 59

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS----------- 118
                +LP  + C + +V L AD  TDEVYA++ L      + EA  R+           
Sbjct: 60  ---AVDLPPHVACRVADVELCADAATDEVYARLALVA----EGEAFGRNLRGGGVDGDDD 112

Query: 119 --DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARD 176
             D  ++        FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL+A+D
Sbjct: 113 MEDFDVERKSRMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKD 172

Query: 177 LHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ 236
           LH   W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA + 
Sbjct: 173 LHGAKWKFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQL 232

Query: 237 PANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQ 296
                    S DS     L A A +  + S F + YNPRA+ SE+++P  K+ K+++   
Sbjct: 233 KNEALFDDFSCDSTKRHTLLAVADSLKHKSVFHISYNPRATASEYIIPHHKFLKSLNL-P 291

Query: 297 ISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRV 356
             +G R  +    E+   RR  G +  +S++DP++W  S+WR+L V W++      ++RV
Sbjct: 292 FCIGARINLQCHNEDVSERR-SGMVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRV 350

Query: 357 SIWEIE 362
           S WEIE
Sbjct: 351 SPWEIE 356


>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 601

 Score =  288 bits (738), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 159/376 (42%), Positives = 226/376 (60%), Gaps = 12/376 (3%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           SG    G K+ +  +LW  CAGPL ++P  G  V YFPQGH E V AS  + ++   P  
Sbjct: 14  SGITVDGSKRYMYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLNELQP-I 72

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFC 133
            +LPSKL C ++ + L  +  +DE YA++TL P   Y  + ++ +       +P    F 
Sbjct: 73  VDLPSKLQCRVITIQLKVERNSDETYAEITLMP---YTTQVVIPTQNE-NQFRPLVNSFT 128

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           K LTASDTS HGGFSVPR+ A +  PPLD S   PAQEL+  DLH N W F+H YRG P+
Sbjct: 129 KVLTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPR 188

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 253
           RHLLTTGW+ F++ K+L AGD ++F+R E  +L +GIRRA  Q  N+ SS++S +SM  G
Sbjct: 189 RHLLTTGWNAFITSKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIESMRHG 248

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           ++A+A HA  N   F V Y PR+  S+F+V   K+  A++ N+ ++G RF   FE ++  
Sbjct: 249 VIASAKHAFDNQCMFIVVYKPRS--SQFIVNYDKFLDAMN-NKFNVGSRFTKRFEEDDFS 305

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPP 373
            RRY GTI G+ D  P  WK S+WR+L+   DE  +  + ++VS WEIE  T    +   
Sbjct: 306 ERRYFGTIIGVIDFSP-HWKCSEWRSLK---DEFASFPRPDKVSPWEIEYSTPSSNVLRL 361

Query: 374 PFFRSKHPRQADDDAS 389
              ++K  R+ ++  S
Sbjct: 362 SMLKNKCSREFNEIGS 377


>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
           thaliana [Arabidopsis thaliana]
          Length = 619

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 160/397 (40%), Positives = 222/397 (55%), Gaps = 37/397 (9%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ---------------------- 57
           G K  +  +LW  CAGPL ++P  G  V YFPQGH E                       
Sbjct: 19  GSKSYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLSL 78

Query: 58  ----VAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE 113
               V  S +++++   P   +LPSKL C ++ + L  +  +DE YA++TL P    D  
Sbjct: 79  LSLSVETSTREELNELQP-ICDLPSKLQCRVIAIHLKVENNSDETYAEITLMP----DTT 133

Query: 114 ALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELM 173
            ++         +P    F K LTASDTS HGGF VP++ A +  P LD S   PAQEL+
Sbjct: 134 QVVIPTQNENQFRPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELL 193

Query: 174 ARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA 233
           A DLH N W F H YRG P+RHLLTTGW+ F + K+L AGD ++F+R E  +L +GIRRA
Sbjct: 194 AIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRA 253

Query: 234 NRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVH 293
             Q  N+ SS++S D M  G++A+A HA  N   FTV Y PR+  S+F+V   K+  AV+
Sbjct: 254 RHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAVN 311

Query: 294 SNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKR 353
            N+ ++G RF M  E ++   RR  GTI G+SD  P  WK S+WR+L+V WDE T+    
Sbjct: 312 -NKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGP 369

Query: 354 NRVSIWEIEPVTAPFFICPPPF-FRSKHPRQADDDAS 389
            +VS W+IE +  P    P  F  ++K  R+ ++  S
Sbjct: 370 KKVSPWDIEHL-MPAINVPRSFLLKNKRLREVNEIGS 405


>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
          Length = 621

 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 157/412 (38%), Positives = 238/412 (57%), Gaps = 23/412 (5%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW+ CAGPL  LP  G  V YFPQGH E +  S + ++D   P + +LPSKL 
Sbjct: 19  KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLR 77

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++ +    D  TDEVYAQ++L P    D   ++  +  + + +P   FF K LTASD 
Sbjct: 78  CRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYFFSKILTASDV 133

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT-- 199
           S  GG  +P++ A + FPPLD S     Q L+A+DL+   W+F+H++RG P+RH+ T+  
Sbjct: 134 SLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGG 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+F + KRL  GD  + +R E  +L  GIRRA  Q  ++ SSV+S++ M  G++A+  
Sbjct: 194 GWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVV 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           +A      F V Y P  S S+FV+   K+  A+++N I +G RFRM FE ++   +RY G
Sbjct: 254 NAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDG 310

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +     I      + K
Sbjct: 311 TIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDISQSSLKKKK 369

Query: 380 HPRQADDDASDLDNVF------KRTM------PWIGDDFGVKDSQSLPGLSL 419
           H  Q ++  + L N++      +R+M      P       ++DS+ L GL L
Sbjct: 370 HWLQLNEIGATLSNLWTCQEIGQRSMNSPISVPEFSYPNAIEDSKFLSGLLL 421


>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
          Length = 541

 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 144/348 (41%), Positives = 216/348 (62%), Gaps = 10/348 (2%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           G  G  + +  +LW  CAGPL +LP  G  V YFPQG+ EQ+ AS   ++  Q+    ++
Sbjct: 15  GTEGVNRYLYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASANDNL-CQLKPIFDI 73

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTL 136
            S++ C ++++ L  +T TDEVYA+++L P  S + E    +D    +N+   ++F K L
Sbjct: 74  SSRIHCNVISIKLKVETNTDEVYAKVSLLPC-SPEVEITFPND----NNEQNIKYFTKVL 128

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASD   HG F + ++ A +  PPLD S   P+QE++A+DLHD++W F+H +RG PKRHL
Sbjct: 129 TASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKFKHTFRGTPKRHL 188

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
            T+GW  FV GK L  GDS +F+R E  +  +GIR+ + Q +++SSSV+S +SMH G +A
Sbjct: 189 FTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKTSHQQSDMSSSVISKESMHHGFIA 248

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
           +A++A      F VFY P++  S+F+V   K+  AV+  + +   RF M FE  +     
Sbjct: 249 SASNAIHTKCMFDVFYKPKS--SKFIVNCDKFLDAVNM-KFNTSSRFTMKFEGHDFNEII 305

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           Y GTI  + D   + WK S+WRNLQV WDE+    + N+VS+WEIEP+
Sbjct: 306 YSGTIVKMEDF-SIYWKGSEWRNLQVQWDEAATIPRPNKVSLWEIEPL 352


>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
 gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
          Length = 690

 Score =  285 bits (729), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/414 (40%), Positives = 223/414 (53%), Gaps = 66/414 (15%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP-NLPSK 79
           EKK+++ +LW ACAG +V++P   + V YFPQGH+E   + +         N+P  +PS 
Sbjct: 5   EKKSLDPQLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPV---------NFPQRIPSL 55

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN-------KPQTEFF 132
           +LC +  V   AD +TDEVYA++   P+P+ D +      L    N       KP +  F
Sbjct: 56  ILCRVATVKFLADPDTDEVYAKIGFVPLPNTDLDFAHDRGLCGNGNDGDSCPDKPAS--F 113

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            KTLT SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  +W FRHIYRG P
Sbjct: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGTP 173

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ---------------- 236
           +RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRR+ R                 
Sbjct: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGWN 233

Query: 237 --------PANLSSSVLSSDSMHIGILAA-----------AAHAAANNSPFTVFYNPRAS 277
                   P +  S  +  D M  G +             AA  AAN  PF V Y PR+S
Sbjct: 234 SNNATCAIPYDGFSLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKPFQVVYYPRSS 293

Query: 278 PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQ 336
             EF V  +    A+     S GMRF+M FETE+S     +MGT+T +   DPVRW NS 
Sbjct: 294 TPEFCVKASSVRAAMRIGWCS-GMRFKMAFETEDSSRISWFMGTVTSVQVADPVRWPNSP 352

Query: 337 WRNLQVGWDESTAGEKRNRVSIWEIEPVT-------APFFICPPPFFRSKHPRQ 383
           WR LQV WDE    +   RVS W +E V+       +PF    PP  +S+ P+Q
Sbjct: 353 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPPRKKSRFPQQ 403


>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
          Length = 744

 Score =  285 bits (728), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 142/297 (47%), Positives = 197/297 (66%), Gaps = 16/297 (5%)

Query: 79  KLLCILLNVTLHADTETDEVYAQMTL--QPVPSYDREALLRS----------DLALKSNK 126
           +++C +++V L A+   DE+YAQ++L  +    +  E+++RS          +  ++   
Sbjct: 1   QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
           P    FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL A+DL+  IW FRH
Sbjct: 61  PH--MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRH 118

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP-ANLSSSVL 245
           IYRGQP+RHLLTTGWS F + K+L  GD+VLF+R +  +L LGIRRA RQ    +  + L
Sbjct: 119 IYRGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGL 178

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
                 + +L+  A A +    F ++YNPRASP+EF+VP  KY ++  S+  S+GMR ++
Sbjct: 179 LCQLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSC-SHPFSMGMRLKI 237

Query: 306 MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
             ETE++  +RY G ITG+ D+DP+RW NS+WR L V WD++      +RVS WEIE
Sbjct: 238 RVETEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIE 294


>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 163/397 (41%), Positives = 219/397 (55%), Gaps = 66/397 (16%)

Query: 18  GGGEKKTI--------NTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           GG EKK++        + +LWHACAG +V LP  G  VVYFPQGH EQ A++        
Sbjct: 12  GGHEKKSVTGSEVGGLDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAAST-------- 63

Query: 70  IPNYPNLPSKLL------CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
               P  P  L+      C +++V   ADTETDEV+A++ LQP      + L    LA  
Sbjct: 64  ----PEFPRTLVPNGSVPCRVVSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASP 119

Query: 124 S-NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
              KP +  F KTLT SD +  GGFS+PR  AE IFPPLD+ + PP Q ++A+D+H  +W
Sbjct: 120 PLEKPAS--FAKTLTQSDANNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVW 177

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPAN--- 239
            FRHIYRG P+RHLLTTGWS FV+ K+L AGD+++F+R    +L +G+RR+ R  +N   
Sbjct: 178 KFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGES 237

Query: 240 ----------------LSSSV------------LSSDSMHI---GILAAAAHAAANNSPF 268
                           L+SS+             + D   +    +L AAA A +    F
Sbjct: 238 SSWHSSISGVGDNGYALNSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSGER-F 296

Query: 269 TVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDL 327
            V Y PRAS +EF V      +A+  +  + GMRF+M FETE+S     +MGTI  +   
Sbjct: 297 EVVYYPRASTAEFCVKAGLVKRALEQSWYA-GMRFKMAFETEDSSRISWFMGTIAAVQAA 355

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           DPV W +S WR LQV WDE    +  NRVS W++E V
Sbjct: 356 DPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLELV 392


>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
 gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
          Length = 752

 Score =  283 bits (724), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 164/421 (38%), Positives = 228/421 (54%), Gaps = 74/421 (17%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL- 76
           GGGE+K ++ +LW ACAG +V LP  G+ ++YFPQGH+EQ A+S         P++P   
Sbjct: 31  GGGEEKHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASS---------PDFPRAL 81

Query: 77  -PSKLL-CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
            P+  + C +L+V   AD ETDEV+A + L P    D +    + L+    KP +  F K
Sbjct: 82  GPAGTVPCRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAALSPSPEKPAS--FAK 139

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GGFSVPR  AE IFP LD+S+ PP Q ++A+D+H  +W FRHIYRG P+R
Sbjct: 140 TLTQSDANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRR 199

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL--------- 245
           HLLTTGWS FV+ K+L AGD+++F+R    +L +G+RR+ R   + ++  L         
Sbjct: 200 HLLTTGWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRS 259

Query: 246 -------------SSDSMHIG------------------------------ILAAAAHAA 262
                         SD   +G                              +L AA  AA
Sbjct: 260 SSRWELRPPMDTGLSDGTLMGENGSSRSAGGGGGNGGGSFTRNRAKVTAKSVLDAATLAA 319

Query: 263 ANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTI 321
           +  + F V Y PRAS +EF V  A+  +A  S+    GMRF+M FETE+S     +MGTI
Sbjct: 320 SGKA-FEVVYYPRASTAEFCV-RAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTI 377

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE-----PVTAPFFICPPPFF 376
           + +   DP+ W +S WR LQV WDE    +  +RVS W++E     P+  P F  P   F
Sbjct: 378 SAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLPMQLPPFSLPRKKF 437

Query: 377 R 377
           R
Sbjct: 438 R 438


>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 711

 Score =  283 bits (723), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 161/389 (41%), Positives = 212/389 (54%), Gaps = 54/389 (13%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K+++++LWHACAG +V +P   + V YFPQGH+E    ++           P +P+ +L
Sbjct: 5   EKSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNV------DFAAAPRIPALVL 58

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKSNKPQTEFFCKTLT 137
           C +  V   AD ETDEVYA++ L P+ +     + + ++ S  +    KP +  F KTLT
Sbjct: 59  CRVAAVKFMADPETDEVYAKIRLVPIANNELDCEDDGVMGSSGSEAPEKPAS--FAKTLT 116

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  IW FRHIYRG P+RHLL
Sbjct: 117 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLL 176

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS-------------- 243
           TTGWS FV+ K+L AGDS++F+R E   L +GIRRA R  A    S              
Sbjct: 177 TTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFP 236

Query: 244 -VLSSDS---MHIGI----------------------LAAAAHAAANNSPFTVFYNPRAS 277
             L  D    M  G+                      +  AA  AAN  PF V Y PRAS
Sbjct: 237 KFLREDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRAS 296

Query: 278 PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQ 336
             EF V  +    AV     S GMRF+M FETE+S     +MGTI+ +   DP+RW NS 
Sbjct: 297 TPEFCVKASGVRSAVRIQWCS-GMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSP 355

Query: 337 WRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           WR LQV WDE    +   RVS W +E V+
Sbjct: 356 WRLLQVTWDEPDLLQNVKRVSPWLVELVS 384


>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
          Length = 285

 Score =  282 bits (721), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 144/269 (53%), Positives = 184/269 (68%), Gaps = 9/269 (3%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK-KDID 67
           GAA+    G G     +  ELWHACAGPLV +P  G  V YFPQGH EQ+ AS   + +D
Sbjct: 7   GAAA----GPGMPSDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLD 62

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP 127
             +P + +LP K+LC ++NV L A+ ++DEVYAQ+ LQP    D+  L   D   +  + 
Sbjct: 63  QYLPMF-DLPPKILCRVVNVELRAEADSDEVYAQIMLQP--EADQNELTSLDAEPQEREK 119

Query: 128 QTEF-FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
            T   FCKTLTASDTSTHGGFSV RR AE+  P LD S  PP QEL+A+DLH   W FRH
Sbjct: 120 CTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRH 179

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           I+RGQPKRHLLTTGWS+FVS KRL +GD+ +F+R E  +L +G+RR  RQ  ++ SSV+S
Sbjct: 180 IFRGQPKRHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVIS 239

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPR 275
           S SMH+G+LA A+HA +  + F+VFY PR
Sbjct: 240 SHSMHLGVLATASHAISTGTLFSVFYKPR 268


>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
 gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
          Length = 708

 Score =  280 bits (717), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 167/416 (40%), Positives = 222/416 (53%), Gaps = 66/416 (15%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP-NLPSK 79
           +KK+++ +LW ACAG +V +P   T V YFPQGH+E   + +         ++P  +PS 
Sbjct: 5   DKKSLDPQLWQACAGSMVQIPPLNTKVFYFPQGHAEHSQSPV---------DFPQRIPSL 55

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN------KPQTEFFC 133
           +LC + +V   AD  TDEV+A+++L P+P  D +     D+    N      KP +  F 
Sbjct: 56  VLCRVASVKFLADPGTDEVFAKISLVPLPDADLDISQDVDICGDGNDSNNAEKPAS--FA 113

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLT SD +  GGFSVPR  AE IFP LD+S  PP Q L+A+D+H  +W FRHIYRG P+
Sbjct: 114 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPR 173

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------------ 235
           RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R                  
Sbjct: 174 RHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGVGIGSGPESSPSHIGWN 233

Query: 236 -------QPANLSSSVLSSDSMHIGILAA-----------AAHAAANNSPFTVFYNPRAS 277
                   P    S  +  D M  G +             AA  AAN +PF V Y PRAS
Sbjct: 234 SNNATSANPYGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVVYYPRAS 293

Query: 278 PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQ 336
             EF V  +    A+ +   S GMRF+M FETE+S     +MGT+  +   DP RW NS 
Sbjct: 294 TPEFCVKASSVRAAMRTCWCS-GMRFKMAFETEDSSRISWFMGTVASVQVADPDRWPNSP 352

Query: 337 WRNLQVGWDESTAGEKRNRVSIWEIEPVT-------APFFICPPPFFRSKHPRQAD 385
           WR LQV WDE    +    VS W +E V+       +PF    PP  + + P+Q D
Sbjct: 353 WRLLQVTWDEPDLLQTVKCVSPWLVELVSNMPVIHLSPF---SPPRKKLRFPQQLD 405


>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
          Length = 701

 Score =  280 bits (716), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 162/405 (40%), Positives = 211/405 (52%), Gaps = 63/405 (15%)

Query: 9   GAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG 68
           G+   S E G    K +N +LWHACAG +V +P   + V YFPQGH+E   AS+      
Sbjct: 6   GSKEKSKEAG----KCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASV------ 55

Query: 69  QIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV----PSYDREALLRSDLALKS 124
              NYP +P+ + C +  +   AD E+DEVYA++TL P+      YD +     +     
Sbjct: 56  DFRNYPRIPAYIPCRVSAMKFMADPESDEVYAKITLVPLNGSESDYDDDGY--GNGTESQ 113

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            KP +  F KTLT SD +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W F
Sbjct: 114 EKPAS--FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKF 171

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--------- 235
           RHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R         
Sbjct: 172 RHIYRGTPRRHLLTTGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESS 231

Query: 236 -----------QPANLSSSVLSSDS-------------------MHIGILA----AAAHA 261
                       P    S+ L  D                      + + A     A   
Sbjct: 232 SGWNPAGCNYVMPYGGFSAFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRL 291

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGT 320
           A N  PF V Y PRAS  EF V  +   K+    +   GMRF+M FETE+S     +MGT
Sbjct: 292 AVNGQPFEVIYYPRASTPEFCVK-SSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGT 350

Query: 321 ITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           I+ +   DPVRW +S WR LQV WDE    +   RVS W +E V+
Sbjct: 351 ISSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 395


>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
 gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
          Length = 755

 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 164/410 (40%), Positives = 227/410 (55%), Gaps = 58/410 (14%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K+++ +LWHACAG +V +P+  T V YFPQGH+E   +++         +   +P  +L
Sbjct: 61  EKSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEHAQSNV------DFGDSFRIPPLIL 114

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDRE-ALLRSDLALKSNKPQTEFFCKTLTASD 140
           C + +V   AD+ETDEV++++TL P+ + + E      D +  S KP +  F KTLT SD
Sbjct: 115 CRVASVKFLADSETDEVFSKITLIPLRNSELENDDSDGDGSENSEKPAS--FAKTLTQSD 172

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
            +  GGFSVPR  AE IFP LD+S +PP Q ++A+D+H  +W FRHIYRG P+RHLLTTG
Sbjct: 173 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTG 232

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPAN--LSSSVLSSDSMHIGI---- 254
           WS FV+ K+L AGDS++F+R E  +L +GIRRA R   N   + S  SS + + G+    
Sbjct: 233 WSSFVNQKKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPYG 292

Query: 255 -------------------------------LAAAAHAAANNSPFTVFYNPRASPSEFVV 283
                                          +  A   AA+N  F V Y PRAS  EF +
Sbjct: 293 GAFTAFLREENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQTFEVVYYPRASTPEFCI 352

Query: 284 PLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQV 342
             +   KA    Q   GMRF+M FETE+S     +MGTI+ +  +DP+RW NS WR LQV
Sbjct: 353 KTSA-VKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQV 411

Query: 343 GWDESTAGEKRNRVSIWEIEPVT-------APFFICPPPFFRSKHPRQAD 385
            WDE        RVS W +E V+       APF    PP  + + P+  D
Sbjct: 412 TWDEPDLLHNVKRVSPWLVELVSNMSMIHLAPF---SPPRKKLRFPQHPD 458


>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 670

 Score =  280 bits (715), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 167/409 (40%), Positives = 224/409 (54%), Gaps = 50/409 (12%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG +K ++ +LWHACAG +V +P   + V YFPQGH+E     +     G +P +P    
Sbjct: 10  GGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLPIHP---- 62

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPS---YDREALLRSDL-ALKSNKPQTEFFCK 134
            +LC +L +   AD E+DEVYA++ L P+      D E     D    +SN  +T  F K
Sbjct: 63  MVLCRVLAIKYMADAESDEVYAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAK 122

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H ++W FRHIYRG P+R
Sbjct: 123 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 182

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------QPANLS 241
           HLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              P   S
Sbjct: 183 HLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGS 242

Query: 242 ---SSVLSSDSMH------------IGILAA-----AAHAAANNSPFTVFYNPRASPSEF 281
              SS+L  D  +             G + A     AA  A +  PF V Y PRAS SEF
Sbjct: 243 CGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEF 302

Query: 282 VVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNL 340
            V       A+     S GMRF+M FETE+S     +MGT++ ++  DP+RW NS WR L
Sbjct: 303 CVKAVDARAAMRIPWCS-GMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLL 361

Query: 341 QVGWDESTAGEKRNRVSIWEIEPVT----APFFICPPPFFRSKHPRQAD 385
           QV WDE    +   RV+ W +E V+     P     PP  + + P+  D
Sbjct: 362 QVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPD 410


>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
          Length = 417

 Score =  278 bits (712), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 155/348 (44%), Positives = 204/348 (58%), Gaps = 40/348 (11%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K+++ +LWHACAGP+V +P   + V YFPQGH+E   A++        P+ P +P+ +LC
Sbjct: 6   KSLDPQLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAV------DFPSSPPVPALVLC 59

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDRE----ALLRSDLALKSNKPQTEFFCKTLTA 138
            + ++   ADTETDEVYA++ L P+P+ + +    A+  SD    + KP +  F KTLT 
Sbjct: 60  RVASLKFMADTETDEVYAKILLMPLPNTELDLEHVAVFGSD---NAEKPAS--FAKTLTQ 114

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD +  GGFSVPR  AE IFPPLD++  PP Q ++A D+H   W FRHIYRG P+RHLLT
Sbjct: 115 SDANNGGGFSVPRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLT 174

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPAN---LSSSVLS--------- 246
           TGWS FV+ K+L AGDS++F+R E   L +GIRRA R   N     S  LS         
Sbjct: 175 TGWSTFVNHKKLVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESKM 234

Query: 247 ------SDSMHIGILAA-----AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSN 295
                  D    G L A     AA  AA+  PF V Y PRAS  EF V  A   KA    
Sbjct: 235 MMMNRNGDWRGKGKLKAEAVLQAATLAASGQPFEVVYYPRASTPEFCVK-ASSVKAAMRV 293

Query: 296 QISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQV 342
               GMRF+M FETE+S     +MGT++ +  +DP+RW NS WR  Q+
Sbjct: 294 PWCCGMRFKMAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLFQL 341


>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
 gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
          Length = 709

 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 160/389 (41%), Positives = 209/389 (53%), Gaps = 54/389 (13%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++ +LWHACAG +V +P   + V YFPQGH+E   + +  D   +IP      S +L
Sbjct: 5   EKRLDPQLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPV--DFSSRIP------SLVL 56

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSY-----DREALLRSDLALKSNKPQTEFFCKTL 136
           C +  V   AD+ETDEVYA+++L P+PS      D   L  +     ++  +   F KTL
Sbjct: 57  CRVAGVKYLADSETDEVYAKISLFPLPSNELDFGDEIGLCDTSTNGTNSTEKPTSFAKTL 116

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  IW FRHIYRG P+RHL
Sbjct: 117 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 176

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--------------------- 235
           LTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R                     
Sbjct: 177 LTTGWSTFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNAS 236

Query: 236 --QPANLSSSVLSSDSMHIGI----------------LAAAAHAAANNSPFTVFYNPRAS 277
              P     S+   +    G+                +  +A  AAN  PF V Y PRAS
Sbjct: 237 CVNPYTGGFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFEVVYYPRAS 296

Query: 278 PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQ 336
             EF V  A   +A    Q   GMRF+M FETE+S     +MGTI  +   DP+RW NS 
Sbjct: 297 TPEFCVK-ASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPIRWPNSP 355

Query: 337 WRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           WR LQV WDE    +   RVS W +E V+
Sbjct: 356 WRLLQVTWDEPDLLQNVKRVSPWLVELVS 384


>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
 gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
 gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
 gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
 gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
          Length = 670

 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/409 (40%), Positives = 224/409 (54%), Gaps = 50/409 (12%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG +K ++ +LWHACAG +V +P   + V YFPQGH+E     +     G +P    +P 
Sbjct: 10  GGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLP----IPP 62

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPS---YDREALLRSDL-ALKSNKPQTEFFCK 134
            +LC +L +   AD E+DEV+A++ L P+      D E     D    +SN  +T  F K
Sbjct: 63  MVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAK 122

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H ++W FRHIYRG P+R
Sbjct: 123 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 182

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------QPANLS 241
           HLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              P   S
Sbjct: 183 HLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGS 242

Query: 242 ---SSVLSSDSMH------------IGILAA-----AAHAAANNSPFTVFYNPRASPSEF 281
              SS+L  D  +             G + A     AA  A +  PF V Y PRAS SEF
Sbjct: 243 CGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEF 302

Query: 282 VVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNL 340
            V       A+     S GMRF+M FETE+S     +MGT++ ++  DP+RW NS WR L
Sbjct: 303 CVKALDARAAMRIPWCS-GMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLL 361

Query: 341 QVGWDESTAGEKRNRVSIWEIEPVT----APFFICPPPFFRSKHPRQAD 385
           QV WDE    +   RV+ W +E V+     P     PP  + + P+  D
Sbjct: 362 QVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPD 410


>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
          Length = 705

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/407 (40%), Positives = 217/407 (53%), Gaps = 44/407 (10%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY-PNL-P 77
           GE++ ++ +LWHACAG +V +P A + V YFPQGH+E   +              P L P
Sbjct: 24  GEERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAATVGPRLLP 83

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE----FFC 133
           + +LC +  V   AD ETDEV+A++ L PV     E   R    L   + + +     F 
Sbjct: 84  ALVLCSVAGVRFLADPETDEVFAKIRLVPVGP--DEVAFREPEGLGPLEAEAQEKLASFA 141

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLT SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG P+
Sbjct: 142 KTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPR 201

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------QPANL 240
           RHLLTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R              P   
Sbjct: 202 RHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGWNAPGYG 261

Query: 241 SSSVLSSD-----------------SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVV 283
             S    D                  + I  +  AA  AAN  PF V Y PRAS  EFVV
Sbjct: 262 GFSAFLKDEENKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYYPRASTPEFVV 321

Query: 284 PLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQV 342
             A    A+  +    GMRF+M FETE+S     +MGTI+ +   DP+RW NS WR LQV
Sbjct: 322 KAASMQAAMRIHWCP-GMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQV 380

Query: 343 GWDESTAGEKRNRVSIWEIEPVTA--PFFICP--PPFFRSKHPRQAD 385
            WDE    +    VS W +E V++  P  + P  PP  + + P+  D
Sbjct: 381 SWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSPPRKKLRVPQHPD 427


>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
 gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
          Length = 653

 Score =  278 bits (710), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/385 (41%), Positives = 216/385 (56%), Gaps = 46/385 (11%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG +K ++ +LWHACAG +V +P   + V YFPQGH+E     +     G +P    +P 
Sbjct: 10  GGTEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF---GNLP----IPP 62

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPS---YDREALLRSDL-ALKSNKPQTEFFCK 134
            +LC +L +   AD E+DEV+A++ L P+      D E     D    +SN  +T  F K
Sbjct: 63  MVLCRVLAIKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAK 122

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H ++W FRHIYRG P+R
Sbjct: 123 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 182

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------QPANLS 241
           HLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              P   S
Sbjct: 183 HLLTTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGS 242

Query: 242 ---SSVLSSDSMH------------IGILAA-----AAHAAANNSPFTVFYNPRASPSEF 281
              SS+L  D  +             G + A     AA  A +  PF V Y PRAS SEF
Sbjct: 243 CGYSSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRPFEVVYYPRASTSEF 302

Query: 282 VVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNL 340
            V       A+     S GMRF+M FETE+S     +MGT++ ++  DP+RW NS WR L
Sbjct: 303 CVKALDARAAMRIPWCS-GMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLL 361

Query: 341 QVGWDESTAGEKRNRVSIWEIEPVT 365
           QV WDE    +   RV+ W +E V+
Sbjct: 362 QVAWDEPDLLQNVKRVNPWLVELVS 386


>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
          Length = 647

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 167/400 (41%), Positives = 221/400 (55%), Gaps = 42/400 (10%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G +K ++ +LWHACAG +V +P   + V YFPQGH+E     +         N P +P  
Sbjct: 11  GSEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDHV------DFKNLP-IPPM 63

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREAL--LRSDLALKSNKPQTEFFCKTLT 137
           +LC +L +   AD E+DEV+A++ L P+   D E      S+    +N  +T  F KTLT
Sbjct: 64  VLCRVLAIKYMADPESDEVFAKLKLIPLKDNDHEYRDGEESNGLGSNNSEKTPSFAKTLT 123

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H  +W FRHIYRG P+RHLL
Sbjct: 124 QSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLL 183

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--------------QPANLSSS 243
           TTGWS FV+ K+L AGDS++F+R E   L +GIRRA R               P   S S
Sbjct: 184 TTGWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYS 243

Query: 244 VL-------SSDSM--HIGILAA-----AAHAAANNSPFTVFYNPRASPSEFVVPLAKYY 289
            L       SS S+    G + A     AA  A +   F V Y PRAS SEF V      
Sbjct: 244 SLLRDDERRSSSSLADRKGKVTAESVVEAAKLAVSGRGFEVVYYPRASSSEFCVKALDAR 303

Query: 290 KAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDEST 348
            A+     S GMRF+M FETE+S     +MGT++ +S  DPVRW NS WR LQV WDE  
Sbjct: 304 AAMRIPWCS-GMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQVAWDEPD 362

Query: 349 AGEKRNRVSIWEIEPVTAPFFICP---PPFFRSKHPRQAD 385
             +   RV+ W +E V+    I P   PP  + + P+  D
Sbjct: 363 LLQYVKRVNPWLVELVSNVHPIIPSFSPPRKKMRLPQHPD 402


>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
          Length = 297

 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 147/288 (51%), Positives = 199/288 (69%), Gaps = 7/288 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKK-DIDGQIPNYPNLP 77
           GGE   +  ELW  CAGPLV++P A   V YFPQGH EQ+ AS ++ D++   P +  LP
Sbjct: 5   GGE--YLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LP 61

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            K+LC ++NV+L A+ +TDEVYAQ+TL PV +   E +       +  +P+   F K LT
Sbjct: 62  PKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLT 121

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTSTHGGFSV R+ A +  PPLD + Q P QEL+A D+H   W F+HI+RGQP+RHLL
Sbjct: 122 ASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLL 181

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS FV+ KRL AGD+ +F+R E  +L +G+RRAN Q +++ SSV+SS SMH+G+LA 
Sbjct: 182 TTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISSHSMHLGVLAT 241

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
           A HA    + F V+Y PR   S+F++ L KY +A+ SN+ S+GMRF+M
Sbjct: 242 ARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKM 286


>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
 gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
          Length = 669

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 157/378 (41%), Positives = 208/378 (55%), Gaps = 42/378 (11%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++++LWHACAG +V +PA  + V YFPQGH+E    S++         +  +P+ + 
Sbjct: 5   EKCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVEF-------GHFQIPALIP 57

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYD----REALLRSDLALKSNKPQTE---FFCK 134
           C +  +   AD ETDEVYA++ L P+ + D          +D  L S     E    F K
Sbjct: 58  CKVSAIKYMADPETDEVYAKIRLIPLNNSDLMLGHGCGEDNDDRLHSGNESQEKPASFAK 117

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYRG P+R
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRR 177

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ-PANLSSSVLSSDSMHIG 253
           HLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R    N  SS  +S + + G
Sbjct: 178 HLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSG 237

Query: 254 I-------------------------LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKY 288
                                     +  AA  AAN  PF   Y PRAS  EF V  +  
Sbjct: 238 FFREDESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYYPRASTPEFCVKASAV 297

Query: 289 YKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES 347
             A+   Q   GMRF+M FETE+S     +MGTI+ +   DP+RW NS WR LQV WDE 
Sbjct: 298 RSAIQI-QWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEP 356

Query: 348 TAGEKRNRVSIWEIEPVT 365
                  RVS W +E V+
Sbjct: 357 DLLHNVKRVSPWLVELVS 374


>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
          Length = 647

 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 159/377 (42%), Positives = 206/377 (54%), Gaps = 43/377 (11%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K+++ +LWHACAG +V +P   + V YFPQGH+E     +         + P +P+ LL
Sbjct: 6   EKSLDPQLWHACAGSMVQIPPVNSKVFYFPQGHAEHSLYPV------DFSSSPPIPALLL 59

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE---FFCKTLTA 138
           C + +V   AD ETDEVYA++ L P+P  + E  L +D          E    F KTLT 
Sbjct: 60  CRVASVKFLADAETDEVYAKIMLVPLP--NTEPDLENDAVFGGGSDNVEKPASFAKTLTQ 117

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD +  GGFSVPR  AE IFP LD++  PP Q ++ARD+H  IW FRHIYRG P+RHLLT
Sbjct: 118 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHLLT 177

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----------------QPANLSS 242
           TGWS FV+ K+L AGDS++F+R E  +L +GIRRA R                 P    S
Sbjct: 178 TGWSSFVNHKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSPYGGFS 237

Query: 243 SVLSSDSMHI--------------GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKY 288
             L  D   I                +  A   AAN  PF + Y PRAS  EF V  +  
Sbjct: 238 GFLKEDESKITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYYPRASTPEFCVKASAV 297

Query: 289 YKAVHSNQISLGMRFRMMFETEE-SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES 347
             A+     SL MRF+M FETE+ S    +MGT++ +   DP+RW NS WR LQV WDE 
Sbjct: 298 RAAMRVPWCSL-MRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLLQVTWDEP 356

Query: 348 TAGEKRNRVSIWEIEPV 364
              +   RVS W +E V
Sbjct: 357 DLLQNVERVSPWLVELV 373


>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
 gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
          Length = 671

 Score =  276 bits (707), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 159/384 (41%), Positives = 210/384 (54%), Gaps = 53/384 (13%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++++LWHACAG +V +PA  + V YFPQGH+E    S+          +  +P+ + 
Sbjct: 5   EKCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVDF-------GHFQIPALIP 57

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN------------KPQT 129
           C +  +   A+ ETDEVYA++ L P  + D   L+  D   + +            KP +
Sbjct: 58  CKVSAIKYMAEPETDEVYAKIRLTPSSNSD---LMFGDGCGEDSDDRLPNGIESQEKPAS 114

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 115 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYR 172

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--QPANLSSSVLSS 247
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R     N  SS  +S
Sbjct: 173 GTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGWNS 232

Query: 248 DSMHIGIL-------------------------AAAAHAAANNSPFTVFYNPRASPSEFV 282
              + G L                           AA  AAN  PF V Y PRAS  EF 
Sbjct: 233 FGGYSGFLREDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYYPRASTPEFC 292

Query: 283 VPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQ 341
           V  +    A+H  Q   GMRF+M FETE+S     +MGTI+ +   DP+RW NS WR LQ
Sbjct: 293 VRASAVRTAMHI-QWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPWRLLQ 351

Query: 342 VGWDESTAGEKRNRVSIWEIEPVT 365
           V WDE    +   RVS W  E V+
Sbjct: 352 VAWDEPDLLQNVKRVSPWLAELVS 375


>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 709

 Score =  276 bits (707), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 166/409 (40%), Positives = 221/409 (54%), Gaps = 47/409 (11%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G ++ ++ +LWHACAG +V +P A + V YFPQGH+E        ++   +   P LP+ 
Sbjct: 26  GAERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRP-LPAL 84

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---SNKPQTE----FF 132
           +LC +  V   AD +TDEV+A++ L PV     EA  R    L    S+ P+       F
Sbjct: 85  VLCCVAGVRFLADPDTDEVFAKIRLVPVGP--GEAGFREPEGLGPLGSDPPEAREKLSSF 142

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            KTLT SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG P
Sbjct: 143 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTP 202

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------QPAN 239
           +RHLLTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R              P  
Sbjct: 203 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAPGY 262

Query: 240 LSSSVLSSD------------------SMHIGILAAAAHAAANNSPFTVFYNPRASPSEF 281
              S    D                   + I  +  AA  AAN+ PF V Y PRAS  EF
Sbjct: 263 GGFSAFLKDEENKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTPEF 322

Query: 282 VVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNL 340
           VV  A    A+  +    GMRF+M FETE+S     +MGTI+ +   DP+RW NS WR L
Sbjct: 323 VVKAAAMQAAMRIHWCP-GMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRLL 381

Query: 341 QVGWDESTAGEKRNRVSIWEIEPVTA--PFFICP--PPFFRSKHPRQAD 385
           QV WDE    +    VS W +E V++  P  + P  PP  + + P+  D
Sbjct: 382 QVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSPPRKKLRVPQHPD 430


>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 698

 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 160/414 (38%), Positives = 220/414 (53%), Gaps = 60/414 (14%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++ +LWHACAG +V +P     V YFPQGH+E   A +         N P +PS  L
Sbjct: 15  EKCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPV------DFRNCPKVPSYTL 68

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKSNKPQTEFFCKTLT 137
           C +  +   AD +TDEV+A++ L P+      ++ + + R +   + +KP +  F KTLT
Sbjct: 69  CRVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLN-GSEQDKPTS--FAKTLT 125

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RHLL
Sbjct: 126 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 185

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------QPA------- 238
           TTGWS FV+ K+L AGDS++F+R E   L +GIRRA R             PA       
Sbjct: 186 TTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVS 245

Query: 239 ----------------------NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRA 276
                                 N + S++    +    +  AA  A+N  PF + + PRA
Sbjct: 246 YGAFSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRA 305

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNS 335
           S  EF V  A    A+     S GMRF+M FETE+S     +MGTI  +   DP+RW  S
Sbjct: 306 STPEFCVKAALVKAALQIRWCS-GMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPES 364

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEPVT--APFFICP--PPFFRSKHPRQAD 385
            WR LQV WDE    +   RVS W +E V+  +P  + P  PP  + ++P+  D
Sbjct: 365 PWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQHPD 418


>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 701

 Score =  276 bits (705), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 160/414 (38%), Positives = 220/414 (53%), Gaps = 60/414 (14%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++ +LWHACAG +V +P     V YFPQGH+E   A +         N P +PS  L
Sbjct: 15  EKCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPV------DFRNCPKVPSYTL 68

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKSNKPQTEFFCKTLT 137
           C +  +   AD +TDEV+A++ L P+      ++ + + R +   + +KP +  F KTLT
Sbjct: 69  CRVSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLN-GSEQDKPTS--FAKTLT 125

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RHLL
Sbjct: 126 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 185

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------QPA------- 238
           TTGWS FV+ K+L AGDS++F+R E   L +GIRRA R             PA       
Sbjct: 186 TTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVS 245

Query: 239 ----------------------NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRA 276
                                 N + S++    +    +  AA  A+N  PF + + PRA
Sbjct: 246 YGAFSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRA 305

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNS 335
           S  EF V  A    A+     S GMRF+M FETE+S     +MGTI  +   DP+RW  S
Sbjct: 306 STPEFCVKAALVKAALQIRWCS-GMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPES 364

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEPVT--APFFICP--PPFFRSKHPRQAD 385
            WR LQV WDE    +   RVS W +E V+  +P  + P  PP  + ++P+  D
Sbjct: 365 PWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQHPD 418


>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
 gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  275 bits (704), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 159/384 (41%), Positives = 210/384 (54%), Gaps = 49/384 (12%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++++LWHACAG +V +P   + V YFPQGH+E     M  D        P  P+ +L
Sbjct: 6   EKCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEHTL--MNVDFSA----LPRSPALIL 59

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-----PSYDREALLRSDLALKSNKPQTEFFCKTL 136
           C +  V   AD ETDEVYA++ + PV        D + +L S+ +  + KP +  F KTL
Sbjct: 60  CRVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNS--FAKTL 117

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD++  PP Q + A+D+H   W FRHIYRG P+RHL
Sbjct: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHL 177

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--------------------- 235
           LTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R                     
Sbjct: 178 LTTGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGG 237

Query: 236 ----------QPANLSS---SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFV 282
                     +  NL+S   S+     +    +  AAH A++  PF V Y PRA+  EF 
Sbjct: 238 FSAFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPRANTPEFC 297

Query: 283 VPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQ 341
           V  A    A    Q   GMRF+M FETE+S     +MGTI+ I   DP+RW NS WR LQ
Sbjct: 298 V-RASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQ 356

Query: 342 VGWDESTAGEKRNRVSIWEIEPVT 365
           V WDE    +    VS W +E V+
Sbjct: 357 VAWDEPDLLQNVKHVSPWLVELVS 380


>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
 gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
          Length = 620

 Score =  275 bits (704), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 150/340 (44%), Positives = 211/340 (62%), Gaps = 8/340 (2%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW ACAGPLV LP  G  V YFPQGH EQ+ A +++  + Q+ +  NLPSK+LC ++NV
Sbjct: 48  ELWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQQQSEHQMASL-NLPSKILCKVINV 106

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL-KSNKPQTEFFCKTLTASDTSTHGG 146
              A+  TD+VYAQ+ L P P  ++  ++  D  L +  +     F + LT SD S+H  
Sbjct: 107 QCKAEPITDQVYAQIMLLPEP--EQIDVISPDPPLPEPERCVVHSFRRILTVSDISSHDH 164

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           F V ++ AE   PPLD S Q P QEL+A DL+ N W F+HI++G+  +HLLTTGWS FVS
Sbjct: 165 FFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQHIFQGKSNKHLLTTGWSAFVS 224

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            K+L +GD  +F+R E  +L +G+RR   +  N+ SS  S+   H  +LA A++A +  S
Sbjct: 225 SKKLVSGDMFIFLRGENGELRVGVRRLMGRKTNILSSATSNQIRH-SLLAVASYAISTGS 283

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            F VFY PR S SEF+V + KY +A  +++  +GMRF M FE EE    R  GTI  + +
Sbjct: 284 LFCVFYEPRTSRSEFIVSVNKYIEA-RNHKFCIGMRFLMRFEGEEVPIERINGTIVSM-E 341

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
             P RW +S+WR  +V WDE +      RVS WE+E +++
Sbjct: 342 TSP-RWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENISS 380


>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
          Length = 704

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 159/400 (39%), Positives = 214/400 (53%), Gaps = 69/400 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LWHACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC L +V   AD ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRLASVKFLADAETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229

Query: 236 QPANLSSSVLSSDSMHIGIL--------AAAAHAAANNSP-------------------- 267
            P    S  L  D +    L            +A   N+P                    
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289

Query: 268 -FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 325
            F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ + 
Sbjct: 290 AFEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQ 348

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
             DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 388


>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
          Length = 706

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 159/400 (39%), Positives = 214/400 (53%), Gaps = 69/400 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LWHACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC L +V   AD ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRLASVKFLADAETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229

Query: 236 QPANLSSSVLSSDSMHIGIL--------AAAAHAAANNSP-------------------- 267
            P    S  L  D +    L            +A   N+P                    
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289

Query: 268 -FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 325
            F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ + 
Sbjct: 290 AFEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQ 348

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
             DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 388


>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
          Length = 705

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 159/400 (39%), Positives = 214/400 (53%), Gaps = 69/400 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LWHACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC L +V   AD ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRLASVKFLADAETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229

Query: 236 QPANLSSSVLSSDSMHIGIL--------AAAAHAAANNSP-------------------- 267
            P    S  L  D +    L            +A   N+P                    
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289

Query: 268 -FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 325
            F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ + 
Sbjct: 290 AFEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQ 348

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
             DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 388


>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 697

 Score =  275 bits (703), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 158/395 (40%), Positives = 212/395 (53%), Gaps = 62/395 (15%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++K+++ +LWHACAG +V +P+  + V YF QGH+E   A          P++  P +P 
Sbjct: 3   QEKSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF------- 131
            +LC +++V   AD ETDEV+A++TL P+P  D +  L +D  L    P ++        
Sbjct: 54  LILCRVVSVKFLADAETDEVFAKITLLPLPGNDLD--LENDAVLGLTPPSSDVNVNGNGN 111

Query: 132 -----FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
                F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRH
Sbjct: 112 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRH 171

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----------- 235
           IYRG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R           
Sbjct: 172 IYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSTGLGSD 231

Query: 236 QPANLSSSVLSSDS-------MHIGILAAAAHAAANNS-----------------PFTVF 271
            P    S  L  D        M +       +AAA                     F V 
Sbjct: 232 NPYPGFSGFLRDDETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFEVV 291

Query: 272 YNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPV 330
           Y PRAS  EF V  A    A+     S GMRF+M FETE+S     +MGT++ +   DP+
Sbjct: 292 YYPRASTPEFCVKAADVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQVADPI 350

Query: 331 RWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 351 RWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 385


>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
          Length = 705

 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 158/400 (39%), Positives = 215/400 (53%), Gaps = 69/400 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LWHACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC + +V   AD+ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRVASVKFLADSETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229

Query: 236 QPANLSSSVLSSDSMHIGIL--------AAAAHAAANNSP-------------------- 267
            P    S  L  D +    L            +A   N+P                    
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289

Query: 268 -FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 325
            F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ + 
Sbjct: 290 AFEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQ 348

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
             DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 388


>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 670

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 157/372 (42%), Positives = 207/372 (55%), Gaps = 37/372 (9%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K+++ +LWHACAG +V +P   + V YFPQGH+E      + ++D      P +P  +LC
Sbjct: 6   KSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHA----QSNVDFGAARIP-IPPLILC 60

Query: 83  ILLNVTLHADTETDEVYAQMTLQPV--PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
            +  V   AD ETDEV+A++ L P+     D E    +  A  S KP +  F KTLT SD
Sbjct: 61  RVAAVKFLADPETDEVFARLRLVPLRNSELDYEDSDANGEAEGSEKPAS--FAKTLTQSD 118

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
            +  GGFSVPR  AE IFP LD+S +PP Q ++ARD+H  +W FRHIYRG P+RHLLTTG
Sbjct: 119 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTTG 178

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----------------------QPA 238
           WS FV+ K+L AGDS++F+R E   L +GIRRA R                       P 
Sbjct: 179 WSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGPY 238

Query: 239 NLSSSVLSSDSMHIGI----LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHS 294
              S  +  +S    +    +  A   AA+N  F V Y PRA+  EF +  +    A+  
Sbjct: 239 GAFSGFMREESGRAKVSGESVREAVTLAASNQAFEVVYYPRANTPEFCIRTSAVRGAMRI 298

Query: 295 NQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKR 353
              S GMRF+M FETE+S     +MGTI  +  LDP+RW NS WR LQV WDE       
Sbjct: 299 QWCS-GMRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDLLHNV 357

Query: 354 NRVSIWEIEPVT 365
            RVS W +E V+
Sbjct: 358 KRVSPWLVELVS 369


>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
          Length = 703

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 158/399 (39%), Positives = 213/399 (53%), Gaps = 68/399 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LWHACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC + +V   AD ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRVASVKFLADAETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGLGSDNNN 229

Query: 236 ---QPANLSSSVLSSDSMHIGILAAAAHAAAN----NSP--------------------- 267
               P    S  L  D +    L        N    N+P                     
Sbjct: 230 NSNNPYPGFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQA 289

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISD 326
           F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ +  
Sbjct: 290 FEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQV 348

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 349 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 387


>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
          Length = 705

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 158/400 (39%), Positives = 215/400 (53%), Gaps = 69/400 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LWHACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC + +V   AD+ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRVASVKFLADSETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229

Query: 236 QPANLSSSVLSSDSMHIGIL--------AAAAHAAANNSP-------------------- 267
            P    S  L  D +    L            +A   N+P                    
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289

Query: 268 -FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 325
            F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ + 
Sbjct: 290 AFEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQ 348

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
             DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 388


>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
 gi|238014578|gb|ACR38324.1| unknown [Zea mays]
 gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
          Length = 340

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/351 (42%), Positives = 203/351 (57%), Gaps = 31/351 (8%)

Query: 9   GAASNSGEGGGGEKK---TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD 65
           G   N  +G G E++       ELWHACAGP+V LP  G+ VVY PQGH           
Sbjct: 2   GIDLNMVDGEGHERRPPPVTCRELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDVAA 61

Query: 66  IDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS------- 118
                    +LP  ++C + +V L AD  TDEV A++ L      + EA  R+       
Sbjct: 62  ---------DLPPHVVCRVADVELCADAATDEVCARLALVA----EGEAFGRNLGGGGVE 108

Query: 119 ------DLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEL 172
                 D   +        FCKTLTASDTSTHGGFSVPRRAAE  FPPLD++   P+QEL
Sbjct: 109 GDDGMEDFDAERKSGMLHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQEL 168

Query: 173 MARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           +A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RR
Sbjct: 169 VAKDLHGAKWKFRHIYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRR 228

Query: 233 ANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAV 292
           A +          +SDS     L A A +  N S F + YNPRA+ SE+++P AK+ K++
Sbjct: 229 AIQLKNEALFEDFNSDSTKRHSLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSL 288

Query: 293 HSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVG 343
            ++ + +G R       E+   RR  G +  IS++DP++W  S+WR+L +G
Sbjct: 289 -NHPVCIGARINFQCHNEDVSERR-SGVVVRISEIDPMKWPGSKWRSLLMG 337


>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
 gi|223942161|gb|ACN25164.1| unknown [Zea mays]
 gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
 gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
          Length = 681

 Score =  274 bits (700), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/402 (39%), Positives = 213/402 (52%), Gaps = 42/402 (10%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E++ ++ +LWHACAG +V +P   + V YFPQGH+E             +     LPS +
Sbjct: 6   EERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAA----DLAGARALPSLV 61

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF--FCKTLTA 138
           LC +  V   AD ETDEV+A++ L PV   + E     + ++     + +   F KTLT 
Sbjct: 62  LCSVTGVRFLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADAREKLSSFAKTLTQ 121

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG P+RHLLT
Sbjct: 122 SDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLT 181

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA- 257
           TGWS FV+ K+L AGDS++F+R E  +L +GIRR  R        +   ++   G L+A 
Sbjct: 182 TGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAF 241

Query: 258 -----------------------------AAHAAANNSPFTVFYNPRASPSEFVVPLAKY 288
                                        AA  AA+  PF V Y PRAS  EFVV  A  
Sbjct: 242 LKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKAASV 301

Query: 289 YKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES 347
             A+  NQ   GMRF+M FETE+S     +MGTI      DP+RW NS WR LQV WDE 
Sbjct: 302 QNAMR-NQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVAWDEP 360

Query: 348 TAGEKRNRVSIWEIEPVTA--PFFICP--PPFFRSKHPRQAD 385
              +    V+ W +E V++  P  + P  PP  + + P   D
Sbjct: 361 DLLQNVKCVNPWLVEIVSSIPPIHLGPFSPPRKKLRVPHHPD 402


>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
          Length = 699

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 158/384 (41%), Positives = 210/384 (54%), Gaps = 49/384 (12%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++++LWHACAG +V +P   + V YFPQGH+E     M  D        P  P+ +L
Sbjct: 6   EKCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEHTL--MNVDFSA----LPRSPALIL 59

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV-----PSYDREALLRSDLALKSNKPQTEFFCKTL 136
           C +  V   AD ETDEVYA++ + PV        D + +L S+ +  + KP +  F KTL
Sbjct: 60  CRVAAVKFLADPETDEVYAKIRVVPVGNKGNDFDDDDDILGSNESGTAEKPNS--FAKTL 117

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD++  PP Q + A+D+H   W FRHIYRG P+RHL
Sbjct: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHL 177

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--------------------- 235
           LTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R                     
Sbjct: 178 LTTGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGG 237

Query: 236 ----------QPANLSS---SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFV 282
                     +  NL+S   S+     +    +  AA+ A++  PF V Y PRA+  EF 
Sbjct: 238 FSAFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPRANTPEFC 297

Query: 283 VPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQ 341
           V  A    A    Q   GMRF+M FETE+S     +MGTI+ I   DP+RW NS WR LQ
Sbjct: 298 V-RASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQ 356

Query: 342 VGWDESTAGEKRNRVSIWEIEPVT 365
           V WDE    +    VS W +E V+
Sbjct: 357 VAWDEPDLLQNVKHVSPWLVELVS 380


>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
          Length = 679

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 152/360 (42%), Positives = 198/360 (55%), Gaps = 87/360 (24%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           ++  ELWHACAGP++ LP  G+ VVYFPQGH E V     +D+   +PN   +P  + C 
Sbjct: 40  SVCLELWHACAGPMICLPKKGSVVVYFPQGHLELV-----QDLQLLLPN---IPPHVFCR 91

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREAL------------LRSDLALKSNKPQTEF 131
           +++V LHA+  +DEVY Q+ L P     ++ L              ++  +KS+ P    
Sbjct: 92  VVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTPH--M 149

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG- 190
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+S Q P+QEL+A+DLH   W FRHIYRG 
Sbjct: 150 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGV 209

Query: 191 -------QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
                  QP+RHLLTTGWS FV+ K+L +GD+VLF+R    + ++ I +           
Sbjct: 210 SLMSHVWQPRRHLLTTGWSGFVNKKKLVSGDAVLFLRASSSEFIVPIHK----------- 258

Query: 244 VLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
                                                F+  L   Y A        GMRF
Sbjct: 259 -------------------------------------FLKSLDYSYSA--------GMRF 273

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RM FET+++  RR  G I GI+D+DPVRW  S+W+ L V WD+  A  + NRVS WEIEP
Sbjct: 274 RMRFETDDAAERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDDLEA-TRNNRVSPWEIEP 332


>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
          Length = 706

 Score =  273 bits (699), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/400 (39%), Positives = 213/400 (53%), Gaps = 69/400 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LWHACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC L +V   AD ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRLASVKFLADAETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSN 229

Query: 236 QPANLSSSVLSSDSMHIGIL--------AAAAHAAANNSP-------------------- 267
            P    S  L  D +    L            +A   N+P                    
Sbjct: 230 NPYPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQ 289

Query: 268 -FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 325
            F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ + 
Sbjct: 290 AFEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQ 348

Query: 326 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
             DP+RW NS WR LQV WDE    +   R S W +E V+
Sbjct: 349 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRASPWLVELVS 388


>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
          Length = 702

 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 160/403 (39%), Positives = 218/403 (54%), Gaps = 74/403 (18%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++K+++ +LWHACAG +V +P+  + V YF QGH+E   A          P++  P +P 
Sbjct: 3   QEKSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK------------SNK 126
            +LC ++ V   AD ETDEV++++TL P+P  D +  L +D  L             + K
Sbjct: 54  LILCRVVAVKFLADAETDEVFSKITLLPLPGNDLD--LENDAVLGLTPSPDGNGPNGNEK 111

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
           P +  F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRH
Sbjct: 112 PAS--FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRH 169

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS 246
           IYRG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R    L S+ + 
Sbjct: 170 IYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGVG 227

Query: 247 SDSMHI------GIL-------------------AAAAHAAANNS--------------- 266
           SD+ +I      G L                      A+AAA                  
Sbjct: 228 SDNNNIPYPGFSGFLRDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAA 287

Query: 267 ---PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTIT 322
               F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++
Sbjct: 288 RGQAFEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVS 346

Query: 323 GISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            +   DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 347 AVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 389


>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 647

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 155/388 (39%), Positives = 207/388 (53%), Gaps = 53/388 (13%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           ++ ++ +LWHACAG +V +P   T V YFPQGH+E     +           P +P  + 
Sbjct: 15  ERCLDPQLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPV------NFKTCPKVPPFVP 68

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++ V   AD ETDEVYA++ L P+ + D +       A   +KP +  F KTLT SD 
Sbjct: 69  CRVVAVKYMADPETDEVYAKLKLVPLNANDVDYDHDVIGAETRDKPAS--FAKTLTQSDA 126

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RHLLTTGW
Sbjct: 127 NNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGW 186

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------QPA----------- 238
           S FV+ K+L AGDS++F+R E   L +GIRRA +             PA           
Sbjct: 187 STFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPYSGF 246

Query: 239 --------------------NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASP 278
                               N S S++    +    +  AA+ AAN  PF V Y PRAS 
Sbjct: 247 SPFLREDDNRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVYYPRAST 306

Query: 279 SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQW 337
            EF V  +    A+ +   S G+RF+M FETE+S     +MGTI+ +   DP+ W NS W
Sbjct: 307 PEFCVKASLVEAAMQTRWYS-GIRFKMAFETEDSSRISWFMGTISSVQVADPLNWPNSPW 365

Query: 338 RNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           R LQV WDE    +   RVS W +E V+
Sbjct: 366 RLLQVTWDEPDLLQNVRRVSPWLVELVS 393


>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
 gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 703

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 165/411 (40%), Positives = 225/411 (54%), Gaps = 63/411 (15%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN--LPSKL 80
           K ++++LWHACAG L+ LP   + VVYFPQGH+E    ++         ++ N  +PS +
Sbjct: 13  KHLDSQLWHACAGGLIQLPTINSKVVYFPQGHTEHAQGNV---------DFGNARIPSII 63

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKS-NKPQTEFFCKT 135
            C +  +   AD ETDEV+A++ L P+ +     D E  L     LKS +KP +  F KT
Sbjct: 64  PCRVSGIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKSQDKPTS--FAKT 121

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD +  GGFSVPR  AE IFP LD+S++PP Q ++A+D+H  IW FRHIYRG P+RH
Sbjct: 122 LTQSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIWKFRHIYRGTPRRH 181

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------QPANLSSS 243
           LLTTGWS FV+ K+L AGDS++F+R E   L +G+RRA R             P N  SS
Sbjct: 182 LLTTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGIDYSPGWNPTNSGSS 241

Query: 244 VLS-SDSMH--------------------IGILAAAAHAAANNSPFTVFYNPRASPSEFV 282
           ++  SD M                     +  +  AA  AA+   F + Y P A   EFV
Sbjct: 242 LVGYSDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQSFEIVYYPCAGTPEFV 301

Query: 283 VPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQ 341
           V  +    A+  +  S  MRF+M FETE+S     +MGT++ I   DP+RW +S WR LQ
Sbjct: 302 VKASSLRSAMQIHWYS-AMRFKMPFETEDSSRISWFMGTVSSIQAADPIRWPDSPWRMLQ 360

Query: 342 VGWDESTAGEKRNRVSIWEIEPV-------TAPFFICPPPFFRSKHPRQAD 385
           V WDE    +    V+ W +E V        +PF    PP  + + P QAD
Sbjct: 361 VTWDEPDLLQNVKSVNPWLVEVVVNMPAIHVSPF---SPPRKKPRFPLQAD 408


>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
           partial [Cucumis sativus]
          Length = 590

 Score =  273 bits (698), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 126/233 (54%), Positives = 165/233 (70%), Gaps = 4/233 (1%)

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
           FFCK LTASDTSTHGGFSV R+ A +  PPLD S   P QEL A+DLH   W F+HI+RG
Sbjct: 21  FFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRG 80

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLLTTGWS FV+ KRL AGD+ +F+R +  +L +G+RR  RQ + + SSV+SS SM
Sbjct: 81  QPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSM 140

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           H+G+LA A+HA    + F V+Y PR   S+F++ L KY + V  N   +GMRF+M FE E
Sbjct: 141 HLGVLATASHAVRTQTYFVVYYKPRT--SQFIISLNKYLETV-KNGYEVGMRFKMRFEGE 197

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           ES  RR+ GTI G+ D+ P +W +S+WR+L++ WDE    ++  RVS WEIEP
Sbjct: 198 ESPERRFTGTIVGVGDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIEP 249


>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 688

 Score =  273 bits (697), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 160/384 (41%), Positives = 209/384 (54%), Gaps = 48/384 (12%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K +++ LWHACAG +V +P     V YFPQGH+E         +D ++  YP +P  + 
Sbjct: 11  EKCLDSRLWHACAGGMVQMPVVNAKVFYFPQGHAEHACGP----VDFRV--YPKIPPFIQ 64

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVP--SYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           C +  +   AD ETDEVY ++ L P+     D E      +    NK ++  F KTLT S
Sbjct: 65  CKVGAIKYMADPETDEVYVKLRLVPLTRNEGDFEDDAVGGINGSENKDKSPSFAKTLTQS 124

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           D +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTT 184

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR---------QPA------------ 238
           GWS FV+ K+L AGDS++F+R EK  L +GIRRA R          PA            
Sbjct: 185 GWSSFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNSGGGIRPMP 244

Query: 239 --NLSSSVLSSDS--MHIGI------------LAAAAHAAANNSPFTVFYNPRASPSEFV 282
               S+ +   DS  +  G+            +  AA  AAN  PF V Y PRAS  EF 
Sbjct: 245 YGGFSAFLREEDSQLLRNGLSPNAKGKVRPEAVIEAATLAANMQPFEVVYYPRASAPEFC 304

Query: 283 VPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQ 341
           V  A   +A    +   GMRF+M FETE+S     +MGTI+ ++  DP RW NS WR LQ
Sbjct: 305 VK-ANLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADP-RWPNSPWRLLQ 362

Query: 342 VGWDESTAGEKRNRVSIWEIEPVT 365
           V WDE    +   RVS W +E V+
Sbjct: 363 VTWDEPELLQNVKRVSPWLVEIVS 386


>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
 gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
 gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
 gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
 gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
 gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
          Length = 693

 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/397 (40%), Positives = 214/397 (53%), Gaps = 67/397 (16%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++K+++ +LWHACAG +V +P+  + V YF QGH+E   A          P++  P +P 
Sbjct: 3   QEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF------- 131
            +LC +++V   AD ETDEV+A++TL P+P  D +  L +D  L    P ++        
Sbjct: 54  LILCRVVSVKFLADAETDEVFAKITLLPLPGNDLD--LENDAVLGLTPPSSDGNGNGKEK 111

Query: 132 ---FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              F KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q ++A+D+H   W FRHIY
Sbjct: 112 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIY 171

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R    L S+   SD
Sbjct: 172 RGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNA-GSD 228

Query: 249 SMHIGILAAA----------------------AHAAANNS-----------------PFT 269
           + + G                            +AAA                     F 
Sbjct: 229 NPYPGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFE 288

Query: 270 VFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLD 328
           V Y PRAS  EF V  A    A+     S GMRF+M FETE+S     +MGT++ +   D
Sbjct: 289 VVYYPRASTPEFCVKAADVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQVAD 347

Query: 329 PVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           P+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 348 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 384


>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 162/419 (38%), Positives = 221/419 (52%), Gaps = 70/419 (16%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +  ++ +LWHACAG +V +PA  + V YFPQGH+E     +           P +P  + 
Sbjct: 15  ESCLDPQLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPV------NFRTCPKVPPFVP 68

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKSNKPQTEFFCKTLT 137
           C +  V   AD ETDEVYA++ L P+ +    YDR+ +  ++     +KP +  F KTLT
Sbjct: 69  CRVTAVKYRADPETDEVYAKLKLIPLNANDVDYDRDVVGGAE---TQDKPAS--FAKTLT 123

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD+S+ PP Q ++A+D+H   W FRHIYRG P+RHLL
Sbjct: 124 QSDANNGGGFSVPRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLL 183

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------QPA------- 238
           TTGWS FV+ K+L AGDS++F+R E   L +GIRRA +             PA       
Sbjct: 184 TTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWNPAGGNCHIP 243

Query: 239 ------------------------NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNP 274
                                   N S S++    +    ++ A++ AAN  PF V Y P
Sbjct: 244 YGGFSPFFREDDNRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANKKPFEVVYYP 303

Query: 275 RASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWK 333
           RAS  EF V  +    A+     S G+RF+M FETE+S     +MGTI+     DP+ W 
Sbjct: 304 RASTPEFCVKASLVEAALQIRWCS-GIRFKMAFETEDSSRISWFMGTISSAQVADPLNWP 362

Query: 334 NSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT-------APFFICPPPFFRSKHPRQAD 385
           NS WR LQV WDE    +   RVS W +E V+       +PF    PP  + + P+Q D
Sbjct: 363 NSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPF---SPPRKKLRLPQQPD 418


>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
          Length = 443

 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 159/391 (40%), Positives = 212/391 (54%), Gaps = 56/391 (14%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           EK  ++++LWHACAG +V +P   + V YFPQGH+E    ++   +       P +P  +
Sbjct: 5   EKNCLDSQLWHACAGGMVQMPPMNSKVFYFPQGHAEHTLGNVDFSM------LPKIPPLI 58

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV----PSYDREALLRSDLALKSNKPQTEFFCKTL 136
           LC +  V   AD ETDEVYA++ L PV    P ++ +A+L S  +  + KP +  F KTL
Sbjct: 59  LCRVGAVKYLADVETDEVYAKIRLVPVGNNEPEFE-DAVLGSSASETAEKPTS--FAKTL 115

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W FRHIYRG P+RHL
Sbjct: 116 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHL 175

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR---------------QPANLS 241
           LTTGWS FV+ K+L AGDS++F+R +   L +GIRRA R                P +  
Sbjct: 176 LTTGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTGAPGSYG 235

Query: 242 --SSVLSSDSMHI---GI---------------------LAAAAHAAANNSPFTVFYNPR 275
             S+ L  D   I   GI                     +  AA+ AA   PF V Y PR
Sbjct: 236 GFSAYLREDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYPR 295

Query: 276 ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKN 334
           A+  EF V  A    A    Q   G+RF+M FETE+S     +MGTI+ +   DP+ W N
Sbjct: 296 ANTPEFCV-RASSVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADPIHWPN 354

Query: 335 SQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           S WR LQV WDE    +    VS W +E V+
Sbjct: 355 SPWRLLQVTWDEPDLLQNVKHVSPWLVELVS 385


>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
 gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
 gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
 gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
 gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
          Length = 703

 Score =  272 bits (696), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 157/399 (39%), Positives = 213/399 (53%), Gaps = 68/399 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LW ACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC + +V   AD ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRVASVKFLADAETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNN 229

Query: 236 ---QPANLSSSVLSSDSMHIGILAAAAHAAAN----NSP--------------------- 267
               P    S  L  D +    L        N    N+P                     
Sbjct: 230 NSNNPYPGFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQA 289

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISD 326
           F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ +  
Sbjct: 290 FEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSSRISWFMGTVSAVQV 348

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 349 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 387


>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
 gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
          Length = 644

 Score =  272 bits (695), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 153/381 (40%), Positives = 204/381 (53%), Gaps = 37/381 (9%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV-AASMKKDIDGQIPNYPNLPS 78
           GE++ ++ +LWHACAG +V +P   + V YFPQGH+E         D+ G       LP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARAR--PLPP 62

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF--FCKTL 136
            +LC +  V   AD ETDEV+A++ L P    + E     +  +     + +   F KTL
Sbjct: 63  LVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHI+RG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R        +   ++   G L+
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 257 A------------------------------AAHAAANNSPFTVFYNPRASPSEFVVPLA 286
           A                              AA  AA+  PF V Y PRAS  EFVV  A
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 287 KYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWD 345
               A+  NQ   GMRF+M FETE+S     +MGTI      D +RW NS WR LQV WD
Sbjct: 303 SVQNAMR-NQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLLQVSWD 361

Query: 346 ESTAGEKRNRVSIWEIEPVTA 366
           E    +    V+ W +E V++
Sbjct: 362 EPDLLQNVKCVNPWLVEIVSS 382


>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
          Length = 683

 Score =  272 bits (695), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 156/386 (40%), Positives = 206/386 (53%), Gaps = 55/386 (14%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K ++ +LWHACAG +V++P+  + VVYFPQGH+E    ++           P +P  +LC
Sbjct: 13  KCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVLC 65

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN------KPQTEFFCKTL 136
            +  V   AD E+DEVYA++ L  +P  + E     D+ +  N      KP +  F KTL
Sbjct: 66  RVSAVKYLADPESDEVYAKIRL--IPLRNTEGETEDDVLMGGNGIEAPEKPAS--FAKTL 121

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RHL
Sbjct: 122 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHL 181

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------------QP 237
           LTTGWS FV+ K L AGDS++F+R E   L +GIRRA R                    P
Sbjct: 182 LTTGWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSP 241

Query: 238 ANLSSSVLSSDS-----------------MHIGILAAAAHAAANNSPFTVFYNPRASPSE 280
               S  L  D                  +    +A AA  AAN  PF + Y PRAS  E
Sbjct: 242 YRGYSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPE 301

Query: 281 FVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRN 339
           F V  A   +A    Q   GM+F+M FET++S     +MG I+ +   DP+RW NS WR 
Sbjct: 302 FCVK-ASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRL 360

Query: 340 LQVGWDESTAGEKRNRVSIWEIEPVT 365
           LQV WDE    +   RV+ W +E V+
Sbjct: 361 LQVTWDEPDLLQNVKRVNPWLVELVS 386


>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
 gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
          Length = 590

 Score =  271 bits (692), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 156/385 (40%), Positives = 207/385 (53%), Gaps = 57/385 (14%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASM---KKDIDGQIPNYPNLPS 78
           +K ++++LWHACAG +V +P   + V YFPQGH+E    ++   +  I   IP       
Sbjct: 19  EKCLDSQLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDFGRCQISAMIP------- 71

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRS----------DLALKSNKPQ 128
              C +  +   AD ETDEVYA++ L  +P  DR+  L +          + A    KP 
Sbjct: 72  ---CKVSAIKYLADPETDEVYAKIRL--IPLIDRDVFLENSGDDCDDGLYNGAESQEKPA 126

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
           +  F KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q ++A+D+H   W FRHIY
Sbjct: 127 S--FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIY 184

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------- 235
           RG P+RHLLTTGWS FV+ K+L AGDS++F+R +   L +GIRRA R             
Sbjct: 185 RGTPRRHLLTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWN 244

Query: 236 QPANLSSSVLSSDS---------------MHIGILAAAAHAAANNSPFTVFYNPRASPSE 280
                ++  L  D                + +  +  AA  AAN  PF + Y PRAS  E
Sbjct: 245 SFGGYAAGFLREDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYYPRASTPE 304

Query: 281 FVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRN 339
           F V  A   +A    Q   GMRF+M FETE+S     +MGTI+ +   DP+RW NS WR 
Sbjct: 305 FCV-RASAVRAAMQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRL 363

Query: 340 LQVGWDESTAGEKRNRVSIWEIEPV 364
           LQV WDE    +   RVS W +E V
Sbjct: 364 LQVAWDEPDLLQNVKRVSPWLVELV 388


>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
 gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
          Length = 185

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 124/172 (72%), Positives = 146/172 (84%), Gaps = 2/172 (1%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GEK+ +N+ELWHACAGPLV+LPA G+ VVYF QGHSEQVAAS  K++D +IPNYP+LP +
Sbjct: 15  GEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQ 74

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           L+C L NVT+HAD ETDEVYAQ+TLQP+ P   ++A L +DL   S +P T +FCKTLTA
Sbjct: 75  LICQLHNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQP-TNYFCKTLTA 133

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
           SDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W FRHI+RG
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185


>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
          Length = 700

 Score =  270 bits (690), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 154/376 (40%), Positives = 206/376 (54%), Gaps = 42/376 (11%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ +LWHACAG +V +P   + V YFPQGH+E        D+         +P+ +LC +
Sbjct: 21  VDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALVLCRV 75

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
             V   AD +TDEV A++ L PV   + +    +    + +KP +  F KTLT SD +  
Sbjct: 76  DAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAPGAREDKPAS--FAKTLTQSDANNG 133

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  +W FRHIYRG P+RHLLTTGWS F
Sbjct: 134 GGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAF 193

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------QPANLS---------SS 243
           V+ KRL AGDS++F+R     L +GIRRA +            QP +           S+
Sbjct: 194 VNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFST 253

Query: 244 VL---SSDSMHIGI---------LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKA 291
            L     D+   G          +  AA+ AA+  PF V Y PRAS  EF V  A   +A
Sbjct: 254 FLRGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCVK-AGAVRA 312

Query: 292 VHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAG 350
               Q   GMRF+M FETE+S     +MGT+  +   DP+RW NS WR LQV WDE    
Sbjct: 313 AMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLL 372

Query: 351 EKRNRVSIWEIEPVTA 366
           +   RVS W +E V++
Sbjct: 373 QNVKRVSPWLVELVSS 388


>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 632

 Score =  269 bits (688), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/302 (48%), Positives = 194/302 (64%), Gaps = 20/302 (6%)

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLR---SDLALKSNKPQT--- 129
           +P  + C +++V L AD  TDEVYAQ++L  V + + +  +R   S+ A   +   T   
Sbjct: 32  VPPHVFCRVVDVNLQADPATDEVYAQVSLL-VDNEEAKRRMRQGESEEACDGDGEDTGAA 90

Query: 130 -------EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
                    FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+++Q P+QEL+A+DLH   W
Sbjct: 91  KRRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDLHGTEW 150

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLS- 241
            FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R E   L LG+RRA  Q  N+S 
Sbjct: 151 RFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAA-QLKNVSP 209

Query: 242 -SSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
             ++ + DS  +  L   AHA A  S F ++YNPR   SEF+VP  K+ ++  S   S+G
Sbjct: 210 FPALFNQDS-SLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSF-SQPFSVG 267

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRF+M +E E++  RR  G ITG  + D ++   S+W+ L V WD+     + NRVS WE
Sbjct: 268 MRFKMKYENEDASERRSTGMITGSRESD-LKSHGSKWKCLVVRWDDDVECRRLNRVSPWE 326

Query: 361 IE 362
           IE
Sbjct: 327 IE 328


>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
 gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
 gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
          Length = 695

 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 156/393 (39%), Positives = 217/393 (55%), Gaps = 48/393 (12%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A    G+GGG    +++++LW ACAG + ++P  G  V YFPQGH+EQ +A++  D+   
Sbjct: 4   AGPTEGDGGG----SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAV--DLSSA 57

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD------REALLRSDLALK 123
                 +P  + C ++ V   AD E+DEV+A++ L P+   D        A   +    +
Sbjct: 58  -----RVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEE 112

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           +++P+   F KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q + A+D+H   WT
Sbjct: 113 NSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWT 172

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+RDE   + +G+RRA R   ++   
Sbjct: 173 FRHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGD 232

Query: 244 VLSSDSM-----HIGILA------------------------AAAHAAANNSPFTVFYNP 274
             S  S+     + G++                          AA  A    PF V Y P
Sbjct: 233 DESLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYP 292

Query: 275 RASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWK 333
           RAS  EF V  A    A+ + Q   GMRF+M FETE+S     +MGT+ G+   DPVRW 
Sbjct: 293 RASTPEFCVRAAAVRTAM-AVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWP 351

Query: 334 NSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            S WR LQV WDE    +   RV  W +E V++
Sbjct: 352 QSPWRLLQVTWDEPELLQNVKRVCPWLVELVSS 384


>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 700

 Score =  268 bits (686), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 160/396 (40%), Positives = 212/396 (53%), Gaps = 52/396 (13%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K+++ +LWHACAG +V +P   + V YFPQGH+E      + ++D      P +P  +LC
Sbjct: 6   KSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHA----QSNVDFGAARIP-IPPLILC 60

Query: 83  ILLNVTLHADTETDEVYAQMTLQPV--PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
            +  V   AD ETDEV+A++ + P+     D E     + A  S KP +  F KTLT SD
Sbjct: 61  CVAAVKFLADPETDEVFARLRMVPLRNSELDYEDS-DGNGAEGSEKPAS--FAKTLTQSD 117

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
            +  GGFSVPR  AE IFP LD+S +PP Q ++A+D+H  +W FRHIYRG P+RHLLTTG
Sbjct: 118 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTG 177

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLS------------------- 241
           WS FV+ K+L AGDS++F+R E   L +GIRRA R     +                   
Sbjct: 178 WSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSSSGGGLGPGPGL 237

Query: 242 ------------SSVLSSDSMHI---------GILAAAAHAAANNSPFTVFYNPRASPSE 280
                       S  L  +S  +           +  A   AA+N PF V Y PRA+  E
Sbjct: 238 GLGPGPGPYGAFSGFLREESKVVRSGRPKVSGESVREAVTLAASNQPFEVVYYPRANTPE 297

Query: 281 FVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRN 339
           F +  +    A+   Q S GMRF+M FETE+S     +MGTI  +  LDP+RW NS WR 
Sbjct: 298 FCIRTSAVRGAMRI-QWSSGMRFKMPFETEDSSRISWFMGTIASVQLLDPIRWPNSPWRL 356

Query: 340 LQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           LQV WDE        RVS W +E V+    I   PF
Sbjct: 357 LQVTWDEPDLLHNVKRVSPWLVELVSNVPIIHLAPF 392


>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 608

 Score =  268 bits (686), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 158/390 (40%), Positives = 209/390 (53%), Gaps = 56/390 (14%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMK---KDIDGQIPNYPNLPS 78
           ++ ++++LWHACAG +V +P   T V YFPQGH+E     ++   K+   ++P  P +P 
Sbjct: 5   ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKVEYFGKNHQTRVP--PLIP- 61

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN----------KPQ 128
              C L  +   AD +TDEVY +M L P+   + E L   D     N          KP 
Sbjct: 62  ---CRLSAMKYMADPDTDEVYVKMRLTPL--REHELLDSQDDCFLGNTNSGGVENQEKPP 116

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
           T F  KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q ++A+D+H   W FRHIY
Sbjct: 117 TSF-AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIY 175

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------- 235
           RG P+RHLLTTGWS FV+ KRL AGDS++F+R E   L +GIRRA +             
Sbjct: 176 RGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWN 235

Query: 236 --------------QPANLSSSVLSSDSMHIGILA-----AAAHAAANNSPFTVFYNPRA 276
                         + + +S +    D   +G +A      A   A N  PF V Y PRA
Sbjct: 236 NPLFGGGGGFLCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYYPRA 295

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNS 335
           S  EF V  A   KA    Q   GMRF+M FETE+S     +MGTI+ +   DP+RW +S
Sbjct: 296 SSPEFCVK-ASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDS 354

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            WR LQV WDE    +    V+ W +E V+
Sbjct: 355 PWRLLQVVWDEPDLLQNVKCVNPWLVELVS 384


>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
 gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
 gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
          Length = 699

 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/393 (39%), Positives = 217/393 (55%), Gaps = 48/393 (12%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A    G+GGG    +++++LW ACAG + ++P  G  V YFPQGH+EQ +A++  D+   
Sbjct: 8   AGPTEGDGGG----SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAV--DLSSA 61

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD------REALLRSDLALK 123
                 +P  + C ++ V   AD E+DEV+A++ L P+   D        A   +    +
Sbjct: 62  -----RVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEE 116

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           +++P+   F KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q + A+D+H   WT
Sbjct: 117 NSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWT 176

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+RDE   + +G+RRA R   ++   
Sbjct: 177 FRHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGD 236

Query: 244 VLSSDSM-----HIGILA------------------------AAAHAAANNSPFTVFYNP 274
             S  S+     + G++                          AA  A    PF V Y P
Sbjct: 237 DESLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYP 296

Query: 275 RASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWK 333
           RAS  EF V  A    A+ + Q   GMRF+M FETE+S     +MGT+ G+   DPVRW 
Sbjct: 297 RASTPEFCVRAAAVRTAM-AVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWP 355

Query: 334 NSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            S WR LQV WDE    +   RV  W +E V++
Sbjct: 356 QSPWRLLQVTWDEPELLQNVKRVCPWLVELVSS 388


>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
          Length = 706

 Score =  268 bits (684), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/404 (38%), Positives = 217/404 (53%), Gaps = 52/404 (12%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           +A+   E GG + + ++ +LWHACAG +V +P   + V YFPQGH+E  A     D    
Sbjct: 7   SAAGERERGGDDGRCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEH-AQCGGGDFPPG 65

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDR----------EALLRSD 119
                 +P+ +LC +  V   AD +TDEV+A++ L P   +++               + 
Sbjct: 66  AGAGRGIPALVLCRVAGVHFMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAA 125

Query: 120 LALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHD 179
              ++ KP +  F KTLT SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H 
Sbjct: 126 GHAEAEKPAS--FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHG 183

Query: 180 NIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRAN----- 234
            +W FRHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA      
Sbjct: 184 VVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIG 243

Query: 235 -----------------------RQPANLSSSVLSSDSMHIGI---------LAAAAHAA 262
                                  R   + S+ ++++ +   G          +A AA+ A
Sbjct: 244 GPELLPPPPPPPGTNYGGFSMFLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLA 303

Query: 263 ANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTI 321
           A+  PF V Y PRAS  EF V  A   +A    Q   GMRF+M FETE+S     +MGT+
Sbjct: 304 ASGQPFDVVYYPRASTPEFCVK-AGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTV 362

Query: 322 TGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           + +   DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 363 SAVQVSDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 406


>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 595

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/395 (40%), Positives = 215/395 (54%), Gaps = 40/395 (10%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           G G     ++ +LWHACAG +V LP  G  V+YFPQGH EQ A +   D    +     +
Sbjct: 4   GVGESVDRLDAQLWHACAGGMVQLPQVGAKVIYFPQGHGEQAATT--PDFSASMGPSGTI 61

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-EFFCKT 135
           P    C +++V   ADTETDEV+A+M LQP   +    +  ++ A  S  P+    F KT
Sbjct: 62  P----CRVVSVNFLADTETDEVFARMRLQPEGLHGLNDM--TEEAPSSPPPEKPASFAKT 115

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD +  GGFSVPR  AE IFPPLD+S  PP Q ++A+D+H ++W FRHIYRG P+RH
Sbjct: 116 LTQSDANNGGGFSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRH 175

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP------ANLSSSVLSSDS 249
           LLTTGWS FV+ K+L AGD+++F+R    +L +G+RR+ R           S+ V  S S
Sbjct: 176 LLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSNGVSRSGS 235

Query: 250 MHIGILAAAAHAAAN---------------NSPFTVFYNPRASPSEFVVPLAKYYKAVHS 294
                 ++ A   A                  PF V Y PRAS +EF V      +A+  
Sbjct: 236 QGASTTSSFARNRARVTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDH 295

Query: 295 NQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKR 353
              + GMRF+M FETE+S     +MGTI  +   DP+ W NS WR   V WDE    +  
Sbjct: 296 TWYA-GMRFKMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGV 351

Query: 354 NRVSIWEIE-----PVTAPFFICPPPFFRSKHPRQ 383
           +RVS W++E     P+  P F  P    R+  P++
Sbjct: 352 SRVSPWQVELVATLPMQLPPFSYPKKKLRAVQPQE 386


>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
 gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/406 (40%), Positives = 215/406 (52%), Gaps = 65/406 (16%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP--SKL 80
           K ++++LWHACAG +V +PA  + V YFPQGH+E     +         ++ NLP  S  
Sbjct: 17  KCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPV---------DFRNLPRVSHN 67

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSY-----DREALLRSDL--ALKSNKPQTEFFC 133
           LC + ++   AD ETDEV+A++ L P+ S      D+E  +   +  A  +NKP +  F 
Sbjct: 68  LCRVSDIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVS--FA 125

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLT SD +  GGFSVPR  AE IFP LD++  PP Q L+A+D+H   W FRHIYRG P+
Sbjct: 126 KTLTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPR 185

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----------QPANLSSS 243
           RHLLTTGWS FV+ K+L AGDSV+F R E   L +G+RRA R           PA  SS+
Sbjct: 186 RHLLTTGWSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSA 245

Query: 244 V--------LSSDS--------------------MHIGILAA-----AAHAAANNSPFTV 270
           V        L  D                     M  G + A     A   AAN  PF V
Sbjct: 246 VPSGGFGAFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEV 305

Query: 271 FYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDP 329
            Y PRA+  EF V  +    A+     S GMRF+M FETE+S     +MGT+  +   D 
Sbjct: 306 VYYPRANTPEFCVKASLVKTAMQIRWCS-GMRFKMAFETEDSSRISWFMGTVCSVQAADS 364

Query: 330 VRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
           + W +S WR LQV WDE    +   RVS W +E  +    I  PPF
Sbjct: 365 LWWPHSPWRLLQVTWDEPDLLQNVKRVSPWLVELASNMAAIHFPPF 410


>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
 gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
          Length = 700

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 155/391 (39%), Positives = 204/391 (52%), Gaps = 61/391 (15%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP--SKL 80
           K ++++LWHACAG +V +PA  + V YFPQGH+E     +         ++ NLP  S  
Sbjct: 17  KCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPV---------DFRNLPGASHT 67

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSY-----DREALLRSDLALKSNKPQTEFFCKT 135
           LC +  +   AD ETDEV+A++ L P+ S      D+E  +  +     +  +   F KT
Sbjct: 68  LCRVSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVSFAKT 127

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD +  GGFSVPR  AE IFP LD++  PP Q L+A+D+H   W FRHIYRG P+RH
Sbjct: 128 LTQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRH 187

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ----PANLSSSVLSSDSMH 251
           LLTTGWS FV+ K+L AGDSV+F+R E   L +G+RRA R     P +L +  L +  + 
Sbjct: 188 LLTTGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNLVVP 247

Query: 252 IGILAA---------------------------------------AAHAAANNSPFTVFY 272
            G   A                                       AA  AAN  PF   Y
Sbjct: 248 YGGFGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFETVY 307

Query: 273 NPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVR 331
            PRA+  EF V  A   K V   +   GMRF+M FETE+S     +MGT+  + D DP+ 
Sbjct: 308 YPRANTPEFFVK-ASLVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQDADPLC 366

Query: 332 WKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           W  S WR LQV WDE    +   RVS W +E
Sbjct: 367 WPGSPWRLLQVTWDEPDLLQNVKRVSPWLVE 397


>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 701

 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 161/418 (38%), Positives = 213/418 (50%), Gaps = 73/418 (17%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++ +LWHACAG +V +P   + V YFPQGH+E    ++          +  LP  +L
Sbjct: 5   EKVLDPQLWHACAGGMVQMPQMNSKVFYFPQGHAEHAHTNI----------HLRLPPFIL 54

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKSNKPQTEFFCKTLT 137
           C +  V   A+ ETDEV+A+++L P+ +     D +     D+A  S   +   F KTLT
Sbjct: 55  CNVEAVKFMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKPASFAKTLT 114

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYRG P+RHLL
Sbjct: 115 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLL 174

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP-------------------- 237
           TTGWS FV+ K+L AGDSV+F+R E   L +GIRRA +                      
Sbjct: 175 TTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVWSSASGSGN 234

Query: 238 ---------------------------ANLSSSVLSSDSMHIGILAAAAHAAANNSPFTV 270
                                       NLS  V     +    +  A   AA+N PF V
Sbjct: 235 GNCGIGPYGPFSFFLKEENKMLRNGCGGNLSGRV----KVRAEDVVEAVTLAASNKPFEV 290

Query: 271 FYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE-SGTRRYMGTITGISDLDP 329
            Y PRAS  EF V  A   +A    Q   GMRF+M FETE+ S    +MGTI  +  +DP
Sbjct: 291 VYYPRASTPEFCVK-ASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVVDP 349

Query: 330 VRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF------FRSKHP 381
           +RW NS WR LQV WDE    +   RVS W +E V+    I   PF       R +HP
Sbjct: 350 IRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPFSPPRKKLRPQHP 407


>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
          Length = 701

 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/395 (38%), Positives = 210/395 (53%), Gaps = 62/395 (15%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++K+++ +LWHACAG +V +P+  + V YF QGH+E   A          P++  P +P 
Sbjct: 3   QEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF------- 131
            +LC +++V   AD ETDEV+A++TL P+P  D +  L +D  L    P ++        
Sbjct: 54  LILCRVVSVKFLADAETDEVFAKITLLPLPGNDLD--LENDAVLGLTPPSSDGNGNGKEK 111

Query: 132 ---FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              F KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q + A+D+H   W FRHIY
Sbjct: 112 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIY 171

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------- 235
           RG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R             
Sbjct: 172 RGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSNAGSDNPY 231

Query: 236 -----------------------QPANLSSSVLSSDSMHIGILAAAAHAAAN-NSPFTVF 271
                                  +  N   +  ++  + +  +A +  A +  +  F V 
Sbjct: 232 PGFSGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVV 291

Query: 272 YNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPV 330
           Y PRAS  EF V  A    A+       GMR +M FETE+S     +MGT + +   DP+
Sbjct: 292 YYPRASTPEFCVKAADVRSAMRXXWCX-GMRXKMAFETEDSSRISWFMGTXSAVQVADPI 350

Query: 331 RWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           RW NS WR LQV WDE    +   RVS W +  V+
Sbjct: 351 RWPNSPWRLLQVAWDEPDLXQNVKRVSPWLVXLVS 385


>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
 gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
 gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
 gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 700

 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 156/390 (40%), Positives = 207/390 (53%), Gaps = 55/390 (14%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K ++ +LWHACAG +V +P   + V YFPQGH+E        +  G       +P+ +LC
Sbjct: 18  KCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFPGG-----RVPALVLC 72

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDR--------EALLRSDLALKSNKPQTEFFCK 134
            +  V   AD +TDEV+A++ L PV + ++             +  A +  KP +  F K
Sbjct: 73  RVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPAS--FAK 130

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  +W FRHIYRG P+R
Sbjct: 131 TLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRR 190

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----QPANLS--------- 241
           HLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA +     P  L          
Sbjct: 191 HLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTP 250

Query: 242 ---------SSVLSSDSMHIGILAA----------------AAHAAANNSPFTVFYNPRA 276
                    S  L  D     + AA                AA+ A +  PF V Y PRA
Sbjct: 251 AAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRA 310

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNS 335
           S  EF V  A   +A    Q   GMRF+M FETE+S     +MGT++ +   DP+RW NS
Sbjct: 311 STPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 369

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            WR LQV WDE    +   RVS W +E V+
Sbjct: 370 PWRLLQVSWDEPDLLQNVKRVSPWLVELVS 399


>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
          Length = 700

 Score =  266 bits (681), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 156/390 (40%), Positives = 207/390 (53%), Gaps = 55/390 (14%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K ++ +LWHACAG +V +P   + V YFPQGH+E        +  G       +P+ +LC
Sbjct: 18  KCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFPGG-----RVPALVLC 72

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDR--------EALLRSDLALKSNKPQTEFFCK 134
            +  V   AD +TDEV+A++ L PV + ++             +  A +  KP +  F K
Sbjct: 73  RVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPAS--FAK 130

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  +W FRHIYRG P+R
Sbjct: 131 TLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRR 190

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----QPANLS--------- 241
           HLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA +     P  L          
Sbjct: 191 HLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTP 250

Query: 242 ---------SSVLSSDSMHIGILAA----------------AAHAAANNSPFTVFYNPRA 276
                    S  L  D     + AA                AA+ A +  PF V Y PRA
Sbjct: 251 AAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRA 310

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNS 335
           S  EF V  A   +A    Q   GMRF+M FETE+S     +MGT++ +   DP+RW NS
Sbjct: 311 STPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 369

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            WR LQV WDE    +   RVS W +E V+
Sbjct: 370 PWRLLQVSWDEPDLLQNVKRVSPWLVELVS 399


>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
          Length = 703

 Score =  266 bits (680), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 156/399 (39%), Positives = 212/399 (53%), Gaps = 68/399 (17%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY--PNLPS 78
           ++++++ +LW ACAG +V +P+  + V YFPQGH+E   A          P++  P +P 
Sbjct: 3   QERSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAP---------PDFHAPRVPP 53

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK---------SNKPQT 129
            +LC + +V   AD ETDEVY+++TL P+P  D +  L +D  L          + KP +
Sbjct: 54  LILCRVASVKFLADAETDEVYSKITLLPLPGNDLD--LENDAVLGLTPSPDVNGNEKPAS 111

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H     FRHIYR
Sbjct: 112 --FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYR 169

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------- 235
           G P+RHLLTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R              
Sbjct: 170 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNN 229

Query: 236 ---QPANLSSSVLSSDSMHIGILAAAAHAAAN----NSP--------------------- 267
               P    S  L  D +    L        N    N+P                     
Sbjct: 230 NSNNPYPGFSGFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQA 289

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES-GTRRYMGTITGISD 326
           F V Y PRAS  EF V  +    A+     S GMRF+M FETE+S     +MGT++ +  
Sbjct: 290 FEVVYYPRASTPEFCVKASDVRSAMRIRWCS-GMRFKMAFETEDSLRISWFMGTVSAVQV 348

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 349 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 387


>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
          Length = 767

 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 139/333 (41%), Positives = 200/333 (60%), Gaps = 9/333 (2%)

Query: 57  QVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALL 116
            V AS +++++   P   + PSKL C ++ + L  +  +DE YA++TL P    D   ++
Sbjct: 112 HVEASTREELNELQP-ICDFPSKLQCRVIAIQLKVENNSDETYAEITLMP----DTTQVV 166

Query: 117 RSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARD 176
                    +P    F K LTASDTS HGGFSVP++ A +  PPLD S   P QE++A D
Sbjct: 167 IPTQNQNQFRPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAID 226

Query: 177 LHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ 236
           LH N W FRHIYRG  +RHLLT GW+ F + K+L  GD ++F+R E  +L +GIRRA  Q
Sbjct: 227 LHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQ 286

Query: 237 PANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQ 296
             N+ SS++S +SM  GI+A+A HA  N   F V Y PR+  S+F+V   K+   V+ N+
Sbjct: 287 QGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDVVN-NK 343

Query: 297 ISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRV 356
            ++G RF M FE ++   RR  GTI G+SD  P  WK S+WR+L+V WDE  +  + N+V
Sbjct: 344 FNVGSRFTMRFEGDDFSERRSFGTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQV 402

Query: 357 SIWEIEPVTAPFFICPPPFFRSKHPRQADDDAS 389
           S W+IE +T    +    F ++K  R+ ++  S
Sbjct: 403 SPWDIEHLTPWSNVSRSSFLKNKRSREVNEIGS 435



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 24/39 (61%)

Query: 20 GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV 58
          G K  +  +LW  CAGPL ++P  G  V YFPQGH E V
Sbjct: 19 GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELV 57


>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
 gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
          Length = 619

 Score =  265 bits (677), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 152/383 (39%), Positives = 208/383 (54%), Gaps = 49/383 (12%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++++LWHACAG +V +P   T V YFPQGH+E   A  K D          +P  + 
Sbjct: 13  EKCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEH--AHNKVDFSKT-----RVPPLIP 65

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKSNKPQTEFFCKTLT 137
           C +  +   AD ETDEVY +M L P+      ++ +    ++      KP +  F KTLT
Sbjct: 66  CRISAMKYMADPETDEVYVKMKLTPLRENELDFEEDCFFGNNGLESQEKPAS--FAKTLT 123

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD+S +PP Q ++A+D+H   W FRHIYRG P+RHLL
Sbjct: 124 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLL 183

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--------QPANLSSS------ 243
           TTGWS FV+ K+L AGDS++F+R E   L +GIRRA +        Q +N SS+      
Sbjct: 184 TTGWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSP 243

Query: 244 ---------VLSSDSMHIGI-----------LAAAAHAAANNSPFTVFYNPRASPSEFVV 283
                    +  +D+   G            +  A + A N   F V Y PRAS  EF V
Sbjct: 244 LFGGVGSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYYPRASTPEFCV 303

Query: 284 PLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQV 342
            ++    A+     S GMRF+M FETE+S     +MGTI+ +   DP+RW +S WR LQV
Sbjct: 304 KVSSVKSAMQIQWCS-GMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSPWRLLQV 362

Query: 343 GWDESTAGEKRNRVSIWEIEPVT 365
            WDE    +    V+ W +E V+
Sbjct: 363 VWDEPDLLQNVKCVNPWLVELVS 385


>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
 gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
          Length = 709

 Score =  265 bits (677), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 154/396 (38%), Positives = 211/396 (53%), Gaps = 64/396 (16%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP--NLPSKL 80
           + ++ +LWHACAG +V +P   + V YFPQGH+E           G + + P   +P+ +
Sbjct: 18  RCLDPQLWHACAGGMVQMPPVHSKVYYFPQGHAEHA--------QGPVVDLPAGRVPALV 69

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV----PSYDREALLRSDLAL-----KSNKPQTEF 131
           LC +  V   AD +TDEV+A++ L PV    P Y  +A      A      + +KP +  
Sbjct: 70  LCRVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYAADADDAIGAAAAGGGAQEDKPAS-- 127

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           F KTLT SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  +W FRHIYRG 
Sbjct: 128 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGT 187

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----QPANL------- 240
           P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA +     P  L       
Sbjct: 188 PRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLHHHQPPP 247

Query: 241 --------------------------SSSVLSSDSMHIGI----LAAAAHAAANNSPFTV 270
                                     + +    + + + +    +  AA+ A +  PF V
Sbjct: 248 PPGGGGYAGFSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANLAVSGQPFEV 307

Query: 271 FYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDP 329
            Y PRAS  EF V  A   +A    Q   GMRF+M FETE+S     +MGT++ +   DP
Sbjct: 308 VYYPRASTPEFCVK-AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVSAVQVADP 366

Query: 330 VRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           +RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 367 IRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVS 402


>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
          Length = 702

 Score =  264 bits (675), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 154/391 (39%), Positives = 203/391 (51%), Gaps = 57/391 (14%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + ++ +LWHACAG +V +P     V YFPQGH+E     +         N P +P+ +LC
Sbjct: 16  RCLDPQLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPV------DFRNCPRVPAHILC 69

Query: 83  ILLNVTLHADTETDEVYAQMTLQPV----PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
            +  +   AD  TDEVYA++ L P+      Y+ + +   +     +KP +  F KTLT 
Sbjct: 70  RVAAIKFMADPGTDEVYAKIRLVPLNGAEAGYEDDGIGGLNGTETPDKPAS--FAKTLTQ 127

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 187

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ--------------------PA 238
           TG S FV+ K+L +GDS++F+R E   L +GIRRA R                     P 
Sbjct: 188 TGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTVPY 247

Query: 239 NLSSSVLSSDS------------------MHIGILA-----AAAHAAANNSPFTVFYNPR 275
              S+ L  D                   M  G +       AA  AAN  PF V Y PR
Sbjct: 248 GGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVYYPR 307

Query: 276 ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKN 334
           AS  EF V  A   KA    +   GMRF+M FETE+S     +MGTI+ +   +P+RW  
Sbjct: 308 ASTPEFCVK-ASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVAEPLRWPE 366

Query: 335 SQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           S WR LQV WDE    +   RVS W +E V+
Sbjct: 367 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 397


>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
 gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
          Length = 671

 Score =  264 bits (674), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 145/379 (38%), Positives = 205/379 (54%), Gaps = 48/379 (12%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E+K +++  WH C G +V +P   + V YFPQG++E    ++   +  +IP      + +
Sbjct: 5   EEKCVDSLFWHVCTGSMVQIPPVNSKVFYFPQGYAEHTFTNVDFTVLARIP------AMI 58

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           LC +  V   ADTETDEVYA++ L PV  ++ ++++      ++ KP   FF KTLT SD
Sbjct: 59  LCRVDAVKFLADTETDEVYAKIRLIPVEDFEDDSVVE-----ETEKPA--FFAKTLTQSD 111

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
            +  GGFSVPR  AE IFP LDF+  PP Q + A+D+H   W FRHIYRG P+RHLLT+G
Sbjct: 112 ANNGGGFSVPRYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSG 171

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA---NLSSSVLSSDSMHIGI--- 254
           WS FV+ K+L AG SV+F++ E  +L +GIRR  R         S   S+   + G    
Sbjct: 172 WSAFVNKKKLVAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFVTE 231

Query: 255 ---------------------------LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAK 287
                                      +   +  AAN  PF + Y P AS  E+ V  A 
Sbjct: 232 DENSSTNGNLISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVK-AS 290

Query: 288 YYKAVHSNQISLGMRFRMMFETEE-SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDE 346
             +A  S Q   GMRF+M FETE+ S    +MG+I+ +  +DP+RW +S WR LQV WDE
Sbjct: 291 SVRAAMSVQWCSGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTWDE 350

Query: 347 STAGEKRNRVSIWEIEPVT 365
               +    V+ W +E V+
Sbjct: 351 PDLLQNVKSVNPWLVELVS 369


>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 629

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 146/381 (38%), Positives = 208/381 (54%), Gaps = 20/381 (5%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW  CAGPL ++P  G  V YFPQGH E + +           +     S  L
Sbjct: 22  KSYMYEQLWKLCAGPLYDIPKVGEKVYYFPQGHIE-ILSLSLSLSLSLSLSLSLSLSLSL 80

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
             ++ + L  +  +DE YA++TL P   Y  + ++ +       +P    F K LTASDT
Sbjct: 81  SRVIAIQLKVEKNSDETYAEITLMP---YTTQVVIHNQND-NHYRPSVNSFTKVLTASDT 136

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           S HGGFSVPR+ A +  PPL+ S   PAQEL+  DL  N W F+H YRG P RHL+TTGW
Sbjct: 137 SAHGGFSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGW 196

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHA 261
           + F + K+L AGD ++F+R E  +L +GIRRA  Q  N  SS++S DSM  G++A+A HA
Sbjct: 197 NAFTTSKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHGVIASAVHA 256

Query: 262 AANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTI 321
             N   F V   P    S+F+V   K+  AV+  + ++G RF M FE ++   RRY GTI
Sbjct: 257 FDNQCMFIVVCKPSIRSSQFIVSYDKFLDAVN-KKFNVGSRFTMRFEGDDLSERRYSGTI 315

Query: 322 TGISDLDPVRWKNSQWRNLQ-------------VGWDESTAGEKRNRVSIWEIEPVTAPF 368
            G+ D  P  W  S+WR+L+             V WDE  +  + ++VS WEIE +T   
Sbjct: 316 IGVKDFSP-HWIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIEHLTPLS 374

Query: 369 FICPPPFFRSKHPRQADDDAS 389
            +      ++K  R+ ++  S
Sbjct: 375 NVLRSSLLKNKRSREVNEIGS 395


>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 589

 Score =  263 bits (673), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/386 (41%), Positives = 206/386 (53%), Gaps = 51/386 (13%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP-NYPNLPSKL 80
           ++ ++++LWHACAG +V +P   T V YFPQGH+E       K +D   P N   +P  +
Sbjct: 5   ERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHG---KRVD--FPKNQTRVPPLI 59

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN------------KPQ 128
            C L  +   AD +TDEVY +M L P+   + E L   D     N            KP 
Sbjct: 60  PCRLSAMKYMADPDTDEVYVKMRLTPL--REHELLDSQDDCFLGNSAGGGGVDQGQEKPP 117

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
           T F  KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q ++A+D+    W FRHIY
Sbjct: 118 TSF-AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIY 176

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------- 235
           RG P+RHLLTTGWS FV+ KRL AGDS++F+R E   L +GIRRA +             
Sbjct: 177 RGTPRRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGW 236

Query: 236 -QPANLSSSVLSSDS---------MHIGILAA-----AAHAAANNSPFTVFYNPRASPSE 280
             P      +  S+S         M +G +AA     A   A N  PF V Y PRAS  E
Sbjct: 237 NNPLFGGGFLCGSESNLMSGGDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYYPRASSPE 296

Query: 281 FVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRN 339
           F V  A   KA    Q   GMRF+M FETE+S     +MGTI+ +   DP+ W +S WR 
Sbjct: 297 FCVK-ASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPDSPWRL 355

Query: 340 LQVGWDESTAGEKRNRVSIWEIEPVT 365
           LQV WDE    +    V+ W +E V+
Sbjct: 356 LQVVWDEPDLLQNVKCVNPWLVELVS 381


>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 697

 Score =  262 bits (669), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 157/409 (38%), Positives = 214/409 (52%), Gaps = 61/409 (14%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++ +LWHACAG +V +P   + V YFPQGH+E    +    ID ++P +      +L
Sbjct: 5   EKVLDPQLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTT----IDLRVPPF------IL 54

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSY----DREALLRSDLALKSNKPQTEFFCKTLT 137
           C +  V   AD ETD+V+A+++L P+ +     D ++    D A  S+  +   F KTLT
Sbjct: 55  CNVEAVKFMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKPASFAKTLT 114

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD + +PP Q ++A+D+H   W FRHIYRG P+RHLL
Sbjct: 115 QSDANNGGGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLL 174

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRAN----------------------- 234
           TTGWS FV+ K+L AGDSV+F+R E   L +GIRRA                        
Sbjct: 175 TTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSASGSGI 234

Query: 235 --------------RQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSE 280
                         R    +  ++     +    +  A   AA+N  F V Y PRAS  E
Sbjct: 235 GPFSFFLKEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKAFEVVYYPRASTPE 294

Query: 281 FVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR--RYMGTITGISDLDPVRWKNSQWR 338
           F V  +    A+     S GMRF+M FETE++ TR   +MGTI  +  +DP+ W NS WR
Sbjct: 295 FCVKASSVGAAMRIQWCS-GMRFKMAFETEDA-TRISWFMGTIASVQVVDPICWPNSPWR 352

Query: 339 NLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF------FRSKHP 381
            LQV WDE    +   RVS W +E V+    I   PF       R +HP
Sbjct: 353 LLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPFSPPRKKLRPQHP 401


>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 777

 Score =  261 bits (668), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 152/373 (40%), Positives = 194/373 (52%), Gaps = 67/373 (17%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           G G K  +  ELW ACAGPL  +P  G  V Y PQGH EQV AS  +  + Q     NLP
Sbjct: 16  GCGGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLP 75

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQ 128
            K+ C L+N+ L  + +TDEVYAQ+TL P    D       +         L   +  P 
Sbjct: 76  WKIPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPH 135

Query: 129 TEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIY 188
              FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+
Sbjct: 136 IHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIF 195

Query: 189 RGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD 248
           RGQP+RHLL +GWS+FVS KRL AGD+ +F+R                PA     V+S D
Sbjct: 196 RGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRT--------------SPAEF---VVSRD 238

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
                                           +   L + Y       I +  + R  FE
Sbjct: 239 -------------------------------RYYESLKRNY------SIGMRFKMR--FE 259

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            EE+  +R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P 
Sbjct: 260 GEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPC 319

Query: 369 FICPPP--FFRSK 379
            + P P  F RS+
Sbjct: 320 HVNPLPVRFKRSR 332


>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 652

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/371 (40%), Positives = 193/371 (52%), Gaps = 67/371 (18%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  ELW ACAGPL  +P  G  V Y PQGH EQV AS  +  + Q     NLP K
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQTE 130
           + C L+N+ L  + +TDEVYAQ+TL P    D       +         L   +  P   
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R                PA     V+S D  
Sbjct: 196 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTS--------------PAEF---VVSRD-- 236

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
                                         +   L + Y       I +  + R  FE E
Sbjct: 237 -----------------------------RYYESLKRNY------SIGMRFKMR--FEGE 259

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P  +
Sbjct: 260 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHV 319

Query: 371 CPPP--FFRSK 379
            P P  F RS+
Sbjct: 320 NPLPVRFKRSR 330


>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
 gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
          Length = 514

 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 128/249 (51%), Positives = 169/249 (67%), Gaps = 5/249 (2%)

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
           KP  + F K LTASDTSTHGGFSV R+ A +  P LD +   P QEL+ARDLH   W F+
Sbjct: 31  KPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFK 90

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVL 245
           HI+RGQP+RHLLTTGWS FV+ KRL AGD+ +F+R E   L +G+RR  +Q + + +SV+
Sbjct: 91  HIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVI 150

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
           SS SM +G+LA A+HA    + F VFY PR   S+F++ + KY  A+  N  SLGMR+RM
Sbjct: 151 SSQSMRLGVLATASHAVTTTTIFVVFYKPRI--SQFIISVNKYMMAMK-NGFSLGMRYRM 207

Query: 306 MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            FE EES  R + GTI G  DL   +W  S+WR+LQ+ WDE ++ ++ N+VS WEIEP  
Sbjct: 208 RFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPF- 265

Query: 366 APFFICPPP 374
           +P  + P P
Sbjct: 266 SPSALTPTP 274


>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
          Length = 370

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 148/356 (41%), Positives = 194/356 (54%), Gaps = 38/356 (10%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
            E++ ++ +LWHACAG +V +P   + V YFPQGH+E        D+ G       LPS 
Sbjct: 5   AEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGAR----ALPSL 60

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF--FCKTLT 137
           +LC +  V   AD ETDEV+A++ L PV   + E     + ++     + +   F KTLT
Sbjct: 61  VLCSVTGVRFLADPETDEVFAKIRLVPVAPGEVEFREPDEFSVDPADAREKLSSFAKTLT 120

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG P+RHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLL 180

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGWS FV+ K+L AGDS++F+R E  +L +GIRR  R        +   ++   G L+A
Sbjct: 181 TTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSA 240

Query: 258 ------------------------------AAHAAANNSPFTVFYNPRASPSEFVVPLAK 287
                                         AA  AA+  PF V Y PRAS  EFVV  A 
Sbjct: 241 FLKDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKAAS 300

Query: 288 YYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQV 342
              A+  NQ   GMRF+M FETE+S     +MGTI      DP+RW NS WR LQV
Sbjct: 301 VQNAMR-NQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQV 355


>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 661

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/371 (40%), Positives = 193/371 (52%), Gaps = 67/371 (18%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  ELW ACAGPL  +P  G  V Y PQGH EQV AS  +  + Q     NLP K
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQTE 130
           + C L+N+ L  + +TDEVYAQ+TL P    D       +         L   +  P   
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R                PA     V+S D  
Sbjct: 196 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTS--------------PAEF---VVSRDRY 238

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
           +  +                                   K  +S  +   MR    FE E
Sbjct: 239 YESL-----------------------------------KRNYSIGMRFKMR----FEGE 259

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P  +
Sbjct: 260 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHV 319

Query: 371 CPPP--FFRSK 379
            P P  F RS+
Sbjct: 320 NPLPVRFKRSR 330


>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 771

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/389 (39%), Positives = 197/389 (50%), Gaps = 65/389 (16%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  ELW ACAGPL  +P  G  V Y PQGH EQV AS  +  + Q     NLP K
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQTE 130
           + C L+N+ L  + +TDEVYAQ+TL P    D       +         L   +  P   
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R                PA     V+S D  
Sbjct: 196 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLR--------------TSPAEF---VVSRD-- 236

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
                                         +   L + Y       I +  + R  FE E
Sbjct: 237 -----------------------------RYYESLKRNY------SIGMRFKMR--FEGE 259

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P  +
Sbjct: 260 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHV 319

Query: 371 CPPPFFRSKHPRQADDDASDLDNVFKRTM 399
            P P    +     +   SD+  V +  M
Sbjct: 320 NPLPVRFKRSRSSVNALPSDVSTVTREVM 348


>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
 gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
 gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 479

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/412 (35%), Positives = 220/412 (53%), Gaps = 49/412 (11%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW+ CAGPL  LP  G  V YFPQGH E +  S + ++D   P + +LPSKL 
Sbjct: 19  KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLR 77

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++ +    D  TDEVYAQ++L P    D   ++  +  + + +P   FF K LTASD 
Sbjct: 78  CRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYFFSKILTASDV 133

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT-- 199
           S  GG  +P++ A + FPPLD S     Q L+A+DL+   W+F+H++RG P+RH+ T+  
Sbjct: 134 SLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGG 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+F + KRL  GD  + +R E  +L  GIRRA  Q  ++ SSV+S++ M  G++A+  
Sbjct: 194 GWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVV 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           +A      F V Y P                             RM FE ++   +RY G
Sbjct: 254 NAFKTKCMFNVVYKP-----------------------------RMQFEGKDFSEKRYDG 284

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +     I      + K
Sbjct: 285 TIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDISQSSLKKKK 343

Query: 380 HPRQADDDASDLDNVF------KRTM------PWIGDDFGVKDSQSLPGLSL 419
           H  Q ++  + L N++      +R+M      P       ++DS+ L GL L
Sbjct: 344 HWLQLNEIGATLSNLWTCQEIGQRSMNSPISVPEFSYPNAIEDSKFLSGLLL 395


>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
          Length = 775

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 151/371 (40%), Positives = 193/371 (52%), Gaps = 67/371 (18%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  ELW ACAGPL  +P  G  V Y PQGH EQV AS  +  + Q     NLP K
Sbjct: 16  GGKDALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWK 75

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSD---------LALKSNKPQTE 130
           + C L+N+ L  + +TDEVYAQ+TL P    D       +         L   +  P   
Sbjct: 76  IPCKLMNIELKVEPDTDEVYAQLTLLPDKKQDENTSTTVEEEEVVVPPALPATNEGPHIH 135

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            FCKTLTASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH   W FRHI+RG
Sbjct: 136 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRG 195

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
           QP+RHLL +GWS+FVS KRL AGD+ +F+R                PA     V+S D  
Sbjct: 196 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLR--------------TSPAEF---VVSRD-- 236

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
                                         +   L + Y       I +  + R  FE E
Sbjct: 237 -----------------------------RYYESLKRNY------SIGMRFKMR--FEGE 259

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFI 370
           E+  +R+ GTI GI   DP  W +S+WR+L+V WDE ++  +  RVS W+IEP  +P  +
Sbjct: 260 EAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVSPCHV 319

Query: 371 CPPP--FFRSK 379
            P P  F RS+
Sbjct: 320 NPLPVRFKRSR 330


>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
          Length = 537

 Score =  260 bits (664), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 122/233 (52%), Positives = 166/233 (71%), Gaps = 2/233 (0%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FRHIYRGQ
Sbjct: 11  FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQ 70

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           P+RHLLTTGWS FV+ K+L +GD+VLF+R +  +L LG+RRA +          +S+S  
Sbjct: 71  PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSK 130

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
           I  L+A A++  + S F + YNPRA+ SEF++P  K+ K+++     +GMRF++ + +E+
Sbjct: 131 IHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLN-RPFCIGMRFKIQYGSED 189

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
              RR  G ITGI+D+DP+RW  S+W++L V W++ T    +NR+S WEIE V
Sbjct: 190 VNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIEIV 241


>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
          Length = 658

 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 134/278 (48%), Positives = 176/278 (63%), Gaps = 12/278 (4%)

Query: 95  TDEVYAQMTL----QPVPSYDREAL------LRSDLALKSNKPQTEFFCKTLTASDTSTH 144
           TDEVYAQ++L    + V    RE           + A+K        FCKTLTASDTSTH
Sbjct: 40  TDEVYAQVSLVADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTH 99

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPRRAAE  FPPLD+S+Q P QEL+A+DLH   W FRHIYRGQP+RHLLTTGWS F
Sbjct: 100 GGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGF 159

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           ++ K+L +GD+VLF+R E  +L LG+RRA +         L +   +   L+  AHA A 
Sbjct: 160 INKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAV 219

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
            S F ++YNPR S SEF++P  K+ ++  S   S+GMRF++ +E+E++  RR  G I G 
Sbjct: 220 KSIFHIYYNPRLSQSEFIIPYWKFMRSF-SQPFSVGMRFKLRYESEDASERRRTGIIIGS 278

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
            + DP+ W  S+W+ L V WD+     + N VS WEIE
Sbjct: 279 READPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIE 315


>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
 gi|194699576|gb|ACF83872.1| unknown [Zea mays]
 gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
          Length = 373

 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 146/357 (40%), Positives = 192/357 (53%), Gaps = 37/357 (10%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV-AASMKKDIDGQIPNYPNLPS 78
           GE++ ++ +LWHACAG +V +P   + V YFPQGH+E         D+ G       LP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARAR--PLPP 62

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF--FCKTL 136
            +LC +  V   AD ETDEV+A++ L P    + E     +  +     + +   F KTL
Sbjct: 63  LVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHI+RG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R        +   ++   G L+
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 257 A------------------------------AAHAAANNSPFTVFYNPRASPSEFVVPLA 286
           A                              AA  AA+  PF V Y PRAS  EFVV  A
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 287 KYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQV 342
               A+  NQ   GMRF+M FETE+S     +MGTI      D +RW NS WR LQV
Sbjct: 303 SVQNAMR-NQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLLQV 358


>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
          Length = 680

 Score =  259 bits (662), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 156/409 (38%), Positives = 206/409 (50%), Gaps = 78/409 (19%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K ++ +LWHACAG +V++P+  + VVYFPQGH+E    ++           P +P  +LC
Sbjct: 6   KCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVLC 58

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN------KPQTEFFCKTL 136
            +  V   AD E+DEVYA++ L  +P  + E     D+ +  N      KP +  F KTL
Sbjct: 59  RVSAVKYLADPESDEVYAKIRL--IPLRNTEGETEDDVLMGGNGIEAPEKPAS--FAKTL 114

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RHL
Sbjct: 115 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHL 174

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------------QP 237
           LTTGWS FV+ K L AGDS++F+R E   L +GIRRA R                    P
Sbjct: 175 LTTGWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCGPESPSGWNPASGNGTSP 234

Query: 238 ANLSSSVLSSDS-----------------MHIGILAAAAHAAANNSPFTVFYNPRASPSE 280
               S  L  D                  +    +A AA  AAN  PF + Y PRAS  E
Sbjct: 235 YRGYSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPE 294

Query: 281 FVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWR- 338
           F V  A   +A    Q   GM+F+M FET++S     +MG I+ +   DP+RW NS WR 
Sbjct: 295 FCVK-ASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRL 353

Query: 339 ----------------------NLQVGWDESTAGEKRNRVSIWEIEPVT 365
                                  LQV WDE    +   RV+ W +E V+
Sbjct: 354 LQVLEYEIQKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVELVS 402


>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
 gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 546

 Score =  259 bits (661), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 146/412 (35%), Positives = 220/412 (53%), Gaps = 49/412 (11%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW+ CAGPL  LP  G  V YFPQGH E +  S + ++D   P + +LPSKL 
Sbjct: 19  KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLR 77

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++ +    D  TDEVYAQ++L P    D   ++  +  + + +P   FF K LTASD 
Sbjct: 78  CRVVAIDRKVDKNTDEVYAQISLMP----DTTEVMTHNTTMDTRRPIVYFFSKILTASDV 133

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT-- 199
           S  GG  +P++ A + FPPLD S     Q L+A+DL+   W+F+H++RG P+RH+ T+  
Sbjct: 134 SLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGG 193

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GWS+F + KRL  GD  + +R E  +L  GIRRA  Q  ++ SSV+S++ M  G++A+  
Sbjct: 194 GWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVV 253

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           +A      F V Y P                             RM FE ++   +RY G
Sbjct: 254 NAFKTKCMFNVVYKP-----------------------------RMQFEGKDFSEKRYDG 284

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSK 379
           TI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +     I      + K
Sbjct: 285 TIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDISQSSLKKKK 343

Query: 380 HPRQADDDASDLDNVF------KRTM------PWIGDDFGVKDSQSLPGLSL 419
           H  Q ++  + L N++      +R+M      P       ++DS+ L GL L
Sbjct: 344 HWLQLNEIGATLSNLWTCQEIGQRSMNSPISVPEFSYPNAIEDSKFLSGLLL 395


>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
          Length = 694

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/379 (40%), Positives = 203/379 (53%), Gaps = 38/379 (10%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG ++ ++ +LW ACAG +  +P  G+ V YFPQGH+E  A  +     G +     +P+
Sbjct: 13  GGAERCVDRQLWLACAGGMCTVPPVGSSVYYFPQGHAEH-ALGLAAAGPG-VGGLSRVPA 70

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE---FFCKT 135
            L C +  V   AD +TDEV+A + L P+    R+ +     A      + E    F KT
Sbjct: 71  LLPCRVAAVRYMADPDTDEVFAGIRLVPL----RQDVQDDGAAAAGEDEEHEKPASFAKT 126

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H   W FRHIYRG P+RH
Sbjct: 127 LTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYRGTPRRH 186

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRAN--------------------- 234
           LLTTGWS FV+ K+L AGDS++F+R +   L +GIRRA                      
Sbjct: 187 LLTTGWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWENQQLYT 246

Query: 235 ----RQPANLSSSVLSSDSMHIGI--LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKY 288
               R   N+S S        +    +A AA  A +  PF V Y PRAS  EF V  A  
Sbjct: 247 MGPMRGGGNVSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEFCV-RAAA 305

Query: 289 YKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES 347
            +A    Q   GMRF+M FETE+S     +MGT+ G+   DP+RW  S WR LQV WDE 
Sbjct: 306 VRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQVTWDEP 365

Query: 348 TAGEKRNRVSIWEIEPVTA 366
              +   RVS W +E V++
Sbjct: 366 DLLQNVKRVSPWLVELVSS 384


>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
 gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
          Length = 634

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 150/383 (39%), Positives = 207/383 (54%), Gaps = 53/383 (13%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELW ACAGPLV +P AG  VVY+PQGH EQV A M +D   ++P Y NLPSK+ C ++NV
Sbjct: 47  ELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVY-NLPSKIFCKVINV 105

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK-SNKPQTEFFCKTLTASDTSTHGG 146
            L A+  TDEV+AQ+TL P    D  +L     +L    K     F K LT+SDTSTHGG
Sbjct: 106 QLKAEAGTDEVFAQITLLPETKQDVLSLKEDGNSLPLPRKADLRSFSKKLTSSDTSTHGG 165

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
           FSV +R AE+  PP+D S +PP Q L+A+D+H                            
Sbjct: 166 FSVLKRHAEECLPPMDMSGEPPEQMLVAKDMH---------------------------- 197

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
                          E  +L +G+RRA +  +N S+SV+S+ SM  GIL+ A HA    S
Sbjct: 198 --------------GENGELRIGLRRAMKLHSNASTSVISAHSMQHGILSMAFHAITTGS 243

Query: 267 PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISD 326
            FTV+Y P  +P+EF++P  +Y ++    + S+G  F M+FE EE   +R  GTI G  D
Sbjct: 244 IFTVYYRPWTNPTEFIIPFDQYVESAEL-EYSVGTTFGMLFEVEECAEQRSEGTIVGNED 302

Query: 327 LDPVRWKNSQWRNLQVGWDESTAGEKR-NRVSIWEIEPVTAPFFICPPPFFRSKHPRQAD 385
           +D +RW NS+WR+L+  WD ++ G    +RVS W I P+  P      P   SK  R +D
Sbjct: 303 VDHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMIVPI-EPIKKYDSPLHPSKKARASD 361

Query: 386 DDASDLDNVFKR------TMPWI 402
              + L +  +        +PW+
Sbjct: 362 ASLTGLPSTVRDGALKPPILPWL 384


>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
          Length = 711

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/378 (39%), Positives = 202/378 (53%), Gaps = 37/378 (9%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ-VAASMKKDIDGQIPNYPNLPS 78
           G ++ ++ +LW ACAG +  +P  G  V YFPQGH+E  +  +   D+         +P+
Sbjct: 14  GAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSAA-----RVPA 68

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPV---PSYDREALLRSDLALKSNKPQTEFFCKT 135
            + C +  V   AD +TDEV+A++ L P+    +      +  D A    + +   F KT
Sbjct: 69  LVPCRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPASFAKT 128

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W FRHIYRG P+RH
Sbjct: 129 LTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRH 188

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS-----SVLSSDSM 250
           LLTTGWS FV+ K+L AGDS++F+R +   L +GIRRA R            S  +    
Sbjct: 189 LLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDH 248

Query: 251 HIGIL------AAAAHAAANNSP---------------FTVFYNPRASPSEFVVPLAKYY 289
           + G++       AAA A     P               F V Y PRAS  EF V  A   
Sbjct: 249 YAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVRAAAVR 308

Query: 290 KAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDEST 348
            A+   Q S GMRF+M FETE+S     +MGT+ G+   DP+RW  S WR LQV WDE  
Sbjct: 309 VAMRV-QWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPD 367

Query: 349 AGEKRNRVSIWEIEPVTA 366
             +   RVS W +E V++
Sbjct: 368 LLQNVKRVSPWLVELVSS 385


>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
          Length = 689

 Score =  258 bits (660), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/378 (39%), Positives = 202/378 (53%), Gaps = 37/378 (9%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQ-VAASMKKDIDGQIPNYPNLPS 78
           G ++ ++ +LW ACAG +  +P  G  V YFPQGH+E  +  +   D+         +P+
Sbjct: 14  GAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSAA-----RVPA 68

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPV---PSYDREALLRSDLALKSNKPQTEFFCKT 135
            + C +  V   AD +TDEV+A++ L P+    +      +  D A    + +   F KT
Sbjct: 69  LVPCRVTAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADEQEKPASFAKT 128

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W FRHIYRG P+RH
Sbjct: 129 LTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRH 188

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS-----SVLSSDSM 250
           LLTTGWS FV+ K+L AGDS++F+R +   L +GIRRA R            S  +    
Sbjct: 189 LLTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDH 248

Query: 251 HIGIL------AAAAHAAANNSP---------------FTVFYNPRASPSEFVVPLAKYY 289
           + G++       AAA A     P               F V Y PRAS  EF V  A   
Sbjct: 249 YAGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVRAAAVR 308

Query: 290 KAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDEST 348
            A+   Q S GMRF+M FETE+S     +MGT+ G+   DP+RW  S WR LQV WDE  
Sbjct: 309 VAMRV-QWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPD 367

Query: 349 AGEKRNRVSIWEIEPVTA 366
             +   RVS W +E V++
Sbjct: 368 LLQNVKRVSPWLVELVSS 385


>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
 gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
          Length = 698

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/389 (39%), Positives = 204/389 (52%), Gaps = 44/389 (11%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E + ++ +LWHACAG +V +PA  + V YF QGH+E                   LP  +
Sbjct: 9   EVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLV 68

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL-----ALKSNKPQTE---FF 132
           LC +  V   AD ++DEVYA++ L PV   + E     +L     A  + +P  E    F
Sbjct: 69  LCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSF 128

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            KTLT SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG P
Sbjct: 129 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTP 188

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA-------------- 238
           +RHLLTTGWS FV+ K+L AGDS++F+R    +L +GIRRA R                 
Sbjct: 189 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGY 248

Query: 239 ---NLSSSVLSSDS-----------------MHIGILAAAAHAAANNSPFTVFYNPRASP 278
                S+ +   +S                 + +  +  AA  A++  PF V Y PRAS 
Sbjct: 249 GGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRAST 308

Query: 279 SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQW 337
            +FVV  A    A+     S GMRF+M FETE+S     +MGTI+ +   DP RW NS W
Sbjct: 309 PDFVVKAASVQAAMRIQWCS-GMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPW 367

Query: 338 RNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           R LQV WDE    +    VS W +E V++
Sbjct: 368 RLLQVTWDEPDLLQNVKCVSPWLVELVSS 396


>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
 gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
          Length = 689

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 162/409 (39%), Positives = 215/409 (52%), Gaps = 48/409 (11%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E++ ++ +LWHACAG +V +P   + V YFPQGH+E   A    D+       P L   +
Sbjct: 7   EERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHAGGAADLAAGARPLPPL---V 63

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN---------KPQTEF 131
           LC +  V   AD ETDEV+A++ L P+   + E     +  L            + +   
Sbjct: 64  LCAVTGVRFLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADAREKLSS 123

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           F KTLT SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG 
Sbjct: 124 FAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGT 183

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------QPA 238
           P+RHLLTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R              P 
Sbjct: 184 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSGWNAPG 243

Query: 239 NLSSSVLSSDS-----------------MHIGILAAAAHAAANNSPFTVFYNPRASPSEF 281
             + S    D                  + I  +  AA  AA+  PF V Y PRAS  EF
Sbjct: 244 YGALSAFLKDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYYPRASTPEF 303

Query: 282 VVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNL 340
           VV  A    A+  NQ   GMRF+M FETE+S     +MGTI      DP+RW NS WR L
Sbjct: 304 VVKAASVQNAMR-NQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLL 362

Query: 341 QVGWDESTAGEKRNRVSIWEIEPVTA--PFFICP--PPFFRSKHPRQAD 385
           QV WDE    +    V+ W +E V++  P  + P  PP  + + P+  D
Sbjct: 363 QVTWDEPDLLQNVKCVNPWLVEIVSSIPPIHLGPFSPPRKKLRMPQHPD 411


>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
           Japonica Group]
 gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
          Length = 760

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 152/389 (39%), Positives = 204/389 (52%), Gaps = 44/389 (11%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E + ++ +LWHACAG +V +PA  + V YF QGH+E                   LP  +
Sbjct: 71  EVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLV 130

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL-----ALKSNKPQTE---FF 132
           LC +  V   AD ++DEVYA++ L PV   + E     +L     A  + +P  E    F
Sbjct: 131 LCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSF 190

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            KTLT SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG P
Sbjct: 191 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTP 250

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA-------------- 238
           +RHLLTTGWS FV+ K+L AGDS++F+R    +L +GIRRA R                 
Sbjct: 251 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGY 310

Query: 239 ---NLSSSVLSSDS-----------------MHIGILAAAAHAAANNSPFTVFYNPRASP 278
                S+ +   +S                 + +  +  AA  A++  PF V Y PRAS 
Sbjct: 311 GGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRAST 370

Query: 279 SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQW 337
            +FVV  A    A+     S GMRF+M FETE+S     +MGTI+ +   DP RW NS W
Sbjct: 371 PDFVVKAASVQAAMRIQWCS-GMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPW 429

Query: 338 RNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           R LQV WDE    +    VS W +E V++
Sbjct: 430 RLLQVTWDEPDLLQNVKCVSPWLVELVSS 458


>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
          Length = 588

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 128/234 (54%), Positives = 168/234 (71%), Gaps = 4/234 (1%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A DLH   W FRHIYRGQ
Sbjct: 34  FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQ 93

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSM 250
           P+RHLLT GWS FV+ K+L +GD+VLF+R +  QL LG+RRA + +   L   V SSDS 
Sbjct: 94  PRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDS- 152

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
            + IL++ A +  N S F + +NPR+  SEF+VP  +  K++ ++  S+GMRFR+ +E+E
Sbjct: 153 KLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSL-NHPFSIGMRFRVCYESE 211

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           ++   R  G I+GIS++DP+RW  S+W+ L V WD+ST    +NRVS WEIE V
Sbjct: 212 DA-NERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERV 264


>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
          Length = 707

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/376 (39%), Positives = 202/376 (53%), Gaps = 35/376 (9%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP-NYPNLPS 78
           G ++ ++ +LW ACAG +  +P  G  V YFPQGH+E         +DG    +   +P+
Sbjct: 14  GAERCVDRQLWLACAGSMCTVPLVGASVCYFPQGHAEHALG-----LDGAADLSAARVPA 68

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREAL-LRSDLALKSNKPQTEFFCKTLT 137
            + C +  V   AD +TDEV+A++ L P+   +  A  L  D+A    + +   F KTLT
Sbjct: 69  LVPCRVTAVRYMADPDTDEVFARIRLVPLRGGEAHAGGLDDDVAAADEQEKPASFAKTLT 128

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W FRHIYRG P+RHLL
Sbjct: 129 QSDANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYRGTPRRHLL 188

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD-----SMHI 252
           TTGWS FV+ K+L AGDS++F+R +   L +GIRRA R                    + 
Sbjct: 189 TTGWSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAPTPGWHHYA 248

Query: 253 GIL------AAAAHAAANNSP---------------FTVFYNPRASPSEFVVPLAKYYKA 291
           G++       AAA A     P               F V Y PRAS  EF V  A   +A
Sbjct: 249 GLIRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCV-RAAAVRA 307

Query: 292 VHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAG 350
               Q S GMRF+M FETE+S     +MGT+ G+   DP+RW  S WR LQV WDE    
Sbjct: 308 AMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLL 367

Query: 351 EKRNRVSIWEIEPVTA 366
           +   RVS W +E V++
Sbjct: 368 QNVKRVSPWLVELVSS 383


>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
 gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
          Length = 587

 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 128/234 (54%), Positives = 168/234 (71%), Gaps = 4/234 (1%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A DLH   W FRHIYRGQ
Sbjct: 33  FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQ 92

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSVLSSDSM 250
           P+RHLLT GWS FV+ K+L +GD+VLF+R +  QL LG+RRA + +   L   V SSDS 
Sbjct: 93  PRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDS- 151

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
            + IL++ A +  N S F + +NPR+  SEF+VP  +  K++ ++  S+GMRFR+ +E+E
Sbjct: 152 KLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSL-NHPFSIGMRFRVCYESE 210

Query: 311 ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           ++   R  G I+GIS++DP+RW  S+W+ L V WD+ST    +NRVS WEIE V
Sbjct: 211 DA-NERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERV 263


>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
          Length = 690

 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 152/389 (39%), Positives = 204/389 (52%), Gaps = 44/389 (11%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E + ++ +LWHACAG +V +PA  + V YF QGH+E                   LP  +
Sbjct: 29  EVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLV 88

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL-----ALKSNKPQTE---FF 132
           LC +  V   AD ++DEVYA++ L PV   + E     +L     A  + +P  E    F
Sbjct: 89  LCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSF 148

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            KTLT SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG P
Sbjct: 149 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTP 208

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA-------------- 238
           +RHLLTTGWS FV+ K+L AGDS++F+R    +L +GIRRA R                 
Sbjct: 209 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGY 268

Query: 239 ---NLSSSVLSSDS-----------------MHIGILAAAAHAAANNSPFTVFYNPRASP 278
                S+ +   +S                 + +  +  AA  A++  PF V Y PRAS 
Sbjct: 269 GGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRAST 328

Query: 279 SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQW 337
            +FVV  A    A+     S GMRF+M FETE+S     +MGTI+ +   DP RW NS W
Sbjct: 329 PDFVVKAASVQAAMRIQWCS-GMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPW 387

Query: 338 RNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           R LQV WDE    +    VS W +E V++
Sbjct: 388 RLLQVTWDEPDLLQNVKCVSPWLVELVSS 416


>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
          Length = 549

 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 141/370 (38%), Positives = 218/370 (58%), Gaps = 28/370 (7%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G     +N +LW  CAGPL + P  G           E++ ASM  ++    P + ++PS
Sbjct: 17  GETNNYLNDKLWKLCAGPLFDTPKIG-----------EKLVASMDDELCQLKPIF-DIPS 64

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           K+ C + ++ L  +  T+E+YA+++L P  S D E  +  +   ++N     +F K L+A
Sbjct: 65  KICCNVFSINLKVEPSTNEIYAEVSLLPDTS-DVEIPIPKN---ENNIQNINYFTKVLSA 120

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTST+GGF + +R A +  P LD S   P+QE++A+D+H + W+F+H  RG PKRHL T
Sbjct: 121 SDTSTNGGFVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLFT 180

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
           +GW+ F  GK+L AGDS +F+R E  +  +GI +A  Q  N+ +S++S +SMH  ++A A
Sbjct: 181 SGWNEFAKGKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVVATA 240

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
            +A  N   F VFY PR+  S+F+V   K+   V +N+ S+G +F M FE ++    RY 
Sbjct: 241 LNAIENKCMFVVFYKPRS--SQFIVNFDKFVDRV-NNKFSIGSKFSMKFEGKDLNEIRYN 297

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRS 378
           GT+ G+ D     WK+S+WR+L+V WDE+    + ++VS WEIE +T    I     F+S
Sbjct: 298 GTVVGVRDF-STHWKDSEWRSLEVQWDEAATIPRPDKVSPWEIELLTHSSNI-----FKS 351

Query: 379 ---KHPRQAD 385
              KH RQ +
Sbjct: 352 DALKHKRQLE 361


>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 578

 Score =  255 bits (652), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 187/320 (58%), Gaps = 26/320 (8%)

Query: 84  LLNVTLHADTETDEVYAQMTLQP------VPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
           ++ + L  +  +DE YA++TL P      +P+ +              +P    F K LT
Sbjct: 40  VIAIQLKVERNSDETYAEITLMPNTTQVVIPTQNENQF----------RPLVNSFTKVLT 89

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           ASDTS HGGFSVPR+ A +  PPLD S   PAQEL+  DLH N W F+H YRG P+RHLL
Sbjct: 90  ASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLL 149

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGW+ F++ K+L AGD ++F+R E  +L + IRRA  Q  N+ SS++S +SM  G++A+
Sbjct: 150 TTGWNAFITSKKLVAGDVIVFLRGETGELRVSIRRARYQQGNIPSSLISIESMRHGVIAS 209

Query: 258 AAHAAANNSPFTVFYNPR--------ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFET 309
           A HA  N   F V Y PR           S+F+V   K+  AV+ N+ ++G RF M FE 
Sbjct: 210 AKHAFDNQCMFIVVYKPRFIFCVCISIRSSQFIVNYDKFLDAVN-NKFNVGSRFTMRFEE 268

Query: 310 EESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFF 369
           E    RRY GTI G+SD  P  WK S+WR+L+V WDE  +  + ++VS WEI+  T    
Sbjct: 269 ENFSERRYFGTIIGVSDFSP-HWKCSEWRSLKVQWDEFASFPRPDKVSPWEIKHSTPSSN 327

Query: 370 ICPPPFFRSKHPRQADDDAS 389
           + P    ++K  R+ ++  S
Sbjct: 328 VLPSSMLKNKRSREFNEIGS 347


>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
 gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
          Length = 708

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 152/375 (40%), Positives = 201/375 (53%), Gaps = 35/375 (9%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G ++ ++ +LW ACAG +  +P  G  V YFPQGH+E  A  +    D      P L   
Sbjct: 14  GAERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEH-ALGLAGTADLSAARVPAL--- 69

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREAL-LRSDLALKSNKPQTEFFCKTLTA 138
           + C +  V   AD +TDEV+A++ L P+   + +A  L  D A +  KP +  F KTLT 
Sbjct: 70  VPCRVAAVRYMADPDTDEVFARIRLVPLRGGEADAGGLEDDAADEQEKPAS--FAKTLTQ 127

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W FRHIYRG P+RHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLT 187

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSD-----SMHIG 253
           TGWS FV+ K+L AGDS++F+R +   L +GIRRA R                    + G
Sbjct: 188 TGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSPGWDHYAG 247

Query: 254 IL------AAAAHAAANNSP---------------FTVFYNPRASPSEFVVPLAKYYKAV 292
           ++       AAA A     P               F   Y PRAS  EF V  A   +A 
Sbjct: 248 LMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEFCV-RAAAVRAA 306

Query: 293 HSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGE 351
              Q S GMRF+M FETE+S     +MGT+ G+   DP+RW  S WR LQV WDE    +
Sbjct: 307 MRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQ 366

Query: 352 KRNRVSIWEIEPVTA 366
              RVS W +E V++
Sbjct: 367 NVKRVSPWLVELVSS 381


>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
 gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
 gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
          Length = 681

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 143/373 (38%), Positives = 197/373 (52%), Gaps = 32/373 (8%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G ++ ++ +LW ACAG +  +P  G  V YFPQGH+E        ++         +P+ 
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           + C + +V   AD +TDEV+A++ L P+ + +   +     A      +   F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           D +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W FRHIYRG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRAN------------------------- 234
           GWS FV+ K+L AGDS++F+R +   L +GIRRA                          
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 235 RQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHS 294
           R  A+  ++      +    L  AA  A    PF V Y PRAS  EF V  A   +A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 295 NQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKR 353
            Q   GMRF+M FETE+S     +MGT+  +   DP+RW  S WR LQV WDE    +  
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNV 366

Query: 354 NRVSIWEIEPVTA 366
            RVS W +E V++
Sbjct: 367 KRVSPWLVELVSS 379


>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
 gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
          Length = 716

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/390 (39%), Positives = 210/390 (53%), Gaps = 58/390 (14%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + ++ +LWHACAG +V +PA  + V YFPQGH+E     +       +P    +P+ +LC
Sbjct: 9   RCLDPQLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQGPV------DLPA-GRVPALVLC 61

Query: 83  ILLNVTLHADTETDEVYAQMTLQPV----PSYDREALLRSDLAL-KSNKPQTEFFCKTLT 137
            +  V   AD +TDEV+A++ L PV    P Y  +A+  +  +  + +KP +  F KTLT
Sbjct: 62  RVAAVRFMADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQEDKPAS--FAKTLT 119

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  +W FRHIYRG P+RHLL
Sbjct: 120 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 179

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--------------QPANLSSS 243
           TTGWS FV+ K+L AGDS++F+R E   L +GIRRA +              QP      
Sbjct: 180 TTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHHHQQPPPPQGG 239

Query: 244 VLSSDSMHI---------------------------GILAAAAHAAANNSPFTVFYNPRA 276
             +  SM +                            ++ AA  A +      V+Y PRA
Sbjct: 240 GYAGFSMFLRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQPFEVVYY-PRA 298

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNS 335
           S  EF V  A   +A    Q   GMRF+M FETE+S     +MGT++ +   DP+RW NS
Sbjct: 299 STPEFCVK-AGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVADPIRWPNS 357

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            WR LQV WDE    +   RVS W +E V+
Sbjct: 358 PWRLLQVAWDEPDLLQNVKRVSPWLVELVS 387


>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
          Length = 690

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/376 (39%), Positives = 201/376 (53%), Gaps = 52/376 (13%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ +LWHACAG +V +P   + V YFPQGH+E        D+         +P+ +LC +
Sbjct: 21  VDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALVLCRV 75

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
             V   AD +TDEV A++ L PV   + +    +    + +KP +  F KTLT SD +  
Sbjct: 76  DAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAPGAREDKPAS--FAKTLTQSDANNG 133

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  +W FRHIYRG P+RHLLTTGWS F
Sbjct: 134 GGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAF 193

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------QPANLS---------SS 243
           V+ KRL AGDS++F+R     L +GIRRA +            QP +           S+
Sbjct: 194 VNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGYGYAGFST 253

Query: 244 VL---SSDSMHIGI---------LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKA 291
            L     D+   G          +  AA+ AA+  PF V Y PRAS  EF V  A   +A
Sbjct: 254 FLRGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCVK-AGAVRA 312

Query: 292 VHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAG 350
               Q   GMRF+M FETE+S     +MGT+  +   DP+RW NS WR LQ         
Sbjct: 313 AMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQ--------- 363

Query: 351 EKRNRVSIWEIEPVTA 366
               RVS W +E V++
Sbjct: 364 -NVKRVSPWLVELVSS 378


>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
          Length = 681

 Score =  254 bits (650), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/373 (38%), Positives = 198/373 (53%), Gaps = 32/373 (8%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G ++ ++ +LW ACAG +  +P  G  V YFPQGH+E        ++         +P+ 
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           + C + +V   AD +TDEV+A++ L P+ + +   +     A      +   F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           D +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W FRHIYRG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRAN------------------------- 234
           GWS FV+ K+L AGDS++F+R +   L +GIRRA                          
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 235 RQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHS 294
           R  A+  ++      +    +  AA  A+   PF V Y PRAS  EF V  A   +A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 295 NQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKR 353
            Q   GMRF+M FETE+S     +MGT+  +   DP+RW  S WR LQV WDE    +  
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNV 366

Query: 354 NRVSIWEIEPVTA 366
            RVS W +E V++
Sbjct: 367 KRVSPWLVELVSS 379


>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
          Length = 699

 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 151/393 (38%), Positives = 212/393 (53%), Gaps = 48/393 (12%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A    G+GGG    +++++LW ACAG + ++P  G  V YFPQGH+EQ +A++  D+   
Sbjct: 8   AGPTEGDGGG----SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAV--DLSSA 61

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD------REALLRSDLALK 123
                 +P  + C ++ V   AD E+DEV+A++ L P+   D        A   +    +
Sbjct: 62  -----RVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEE 116

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           +++P+   F KTLT SD +   G    R  AE IFP LD+S +PP Q + A+D+H   WT
Sbjct: 117 NSRPRPTSFAKTLTQSDANNGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWT 176

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+RDE   + +G+RRA R   ++   
Sbjct: 177 FRHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGD 236

Query: 244 VLSSDSM-----HIGILA------------------------AAAHAAANNSPFTVFYNP 274
             S  S+     + G++                          AA  A    PF V Y P
Sbjct: 237 DESLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYP 296

Query: 275 RASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWK 333
           RAS  EF V  A    A+ + Q   GMRF+M FETE+S     +MGT+ G+   DPVRW 
Sbjct: 297 RASTPEFCVRAAAVRTAM-AVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWP 355

Query: 334 NSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            S WR LQV WDE    +   RV  W +E V++
Sbjct: 356 QSPWRLLQVTWDEPELLQNVKRVCPWLVELVSS 388


>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
 gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
          Length = 392

 Score =  253 bits (645), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 148/369 (40%), Positives = 205/369 (55%), Gaps = 48/369 (13%)

Query: 10  AASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           A    G+GGG    +++++LW ACAG + ++P  G  V YFPQGH+EQ +A++  D+   
Sbjct: 8   AGPTEGDGGG----SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAV--DLSSA 61

Query: 70  IPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD------REALLRSDLALK 123
                 +P  + C ++ V   AD E+DEV+A++ L P+   D        A   +    +
Sbjct: 62  -----RVPPLVPCRVVAVRFMADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEE 116

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           +++P+   F KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q + A+D+H   WT
Sbjct: 117 NSRPRPTSFAKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWT 176

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+RDE   + +G+RRA R   ++   
Sbjct: 177 FRHIYRGTPRRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGD 236

Query: 244 VLSSDSM-----HIGILA------------------------AAAHAAANNSPFTVFYNP 274
             S  S+     + G++                          AA  A    PF V Y P
Sbjct: 237 DESLSSIPGWDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRATTGQPFEVLYYP 296

Query: 275 RASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWK 333
           RAS  EF V  A    A+ + Q   GMRF+M FETE+S     +MGT+ G+   DPVRW 
Sbjct: 297 RASTPEFCVRAAAVRTAM-AVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWP 355

Query: 334 NSQWRNLQV 342
            S WR LQV
Sbjct: 356 QSPWRLLQV 364


>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
          Length = 585

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 121/240 (50%), Positives = 168/240 (70%), Gaps = 4/240 (1%)

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
           K  +  FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FR
Sbjct: 29  KHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 88

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSV 244
           HIYRGQP+RHLLTTGWS F++ K+L +GD+VLF+R    +L LG+RRA + +   L  +V
Sbjct: 89  HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAV 148

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
             +DS  + +L+A A++  N S F + +NPR   SEF+VP  K+ K+++ +  S+G RF+
Sbjct: 149 NCTDSKLL-MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYH-FSVGTRFK 206

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           +  E E++  R + G I GIS++DP+ W  S+W++L + WD +T    +NRVS W+IE V
Sbjct: 207 VGCENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGV 265


>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
          Length = 714

 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/419 (36%), Positives = 204/419 (48%), Gaps = 87/419 (20%)

Query: 18  GGGEKKTI--------NTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQ 69
           GG EKK++        + +LWHACAG +V LP  G  VVYFPQGH EQ A++        
Sbjct: 21  GGHEKKSVTGSEVGGLDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAAST-------- 72

Query: 70  IPNYPNLPSKLL------CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALK 123
               P  P  L+      C +++V   ADTETDEV+A++ LQP      + L    LA  
Sbjct: 73  ----PEFPRTLVPNGSVPCRVVSVNFLADTETDEVFARICLQPEIGSSAQDLTDDSLASP 128

Query: 124 S-NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
              KP +  F KTLT SD +  GGFS+PR  AE IFPPLD+ + PP Q ++A+D+H  +W
Sbjct: 129 PLEKPAS--FAKTLTQSDANNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVW 186

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGK-----------RLFAGDSVLFIR----------- 220
            FRHIYRG P+RHLLTTGWS FV+ K           R+ +G+  + +R           
Sbjct: 187 KFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGES 246

Query: 221 ----------------------------------DEKQQLLLGIRRANRQPANLSSSVLS 246
                                             D    L   IR  N+     SS    
Sbjct: 247 SSWHSSISNASTIRPSRWEVKGTESFSDFLGGVGDNGYALNSSIRSENQGSPTTSSFARD 306

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
              +    +  AA  A +   F V Y PRAS +EF V      +A+  +  + GMRF+M 
Sbjct: 307 RARVTAKSVLEAAALAVSGERFEVVYYPRASTAEFCVKAGLVKRALEQSWYA-GMRFKMA 365

Query: 307 FETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           FETE+S     +MGTI  +   DPV W +S WR LQV WDE    +  NRVS W++E V
Sbjct: 366 FETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLELV 424


>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
 gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
          Length = 575

 Score =  250 bits (638), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 122/240 (50%), Positives = 166/240 (69%), Gaps = 4/240 (1%)

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFR 185
           K  +  FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+    P+QEL+A+DLH   W FR
Sbjct: 25  KLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFR 84

Query: 186 HIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPANLSSSV 244
           HIYRGQP+RHLLTTGWS F++ K+L +GD+VLF+R    +L LG+RRA + +   L  +V
Sbjct: 85  HIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRAVQLKNEALLEAV 144

Query: 245 LSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFR 304
             +DS  + +L+A A +  N S F + +NPR   SEF+VP  K+ K ++    S+G RF+
Sbjct: 145 NCTDSKLL-MLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLKGLN-YPFSIGTRFK 202

Query: 305 MMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
           +  + E++  R + G I+GIS++DP+RW  S+W++L V WD  T    +NRVS W+IE V
Sbjct: 203 VGCKNEDANERSF-GLISGISEVDPIRWPGSKWKSLLVKWDGDTKYSHQNRVSPWDIERV 261


>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
           Group]
          Length = 599

 Score =  249 bits (635), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 128/246 (52%), Positives = 168/246 (68%), Gaps = 16/246 (6%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPL------------DFSMQPPAQELMARDLHD 179
           FCKTLTASDTSTHGGFSVPRRAAE  FPPL            D+    P+QEL+A DLH 
Sbjct: 33  FCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVRPSQELIAVDLHG 92

Query: 180 NIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-QPA 238
             W FRHIYRGQP+RHLLT GWS FV+ K+L +GD+VLF+R +  QL LG+RRA + +  
Sbjct: 93  TQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNE 152

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS 298
            L   V SSDS  + IL++ A +  N S F + +NPR+  SEF+VP  +  K++ ++  S
Sbjct: 153 ALFEPVNSSDS-KLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSL-NHPFS 210

Query: 299 LGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSI 358
           +GMRFR+ +E+E++   R  G I+GIS++DP+RW  S+W+ L V WD+ST    +NRVS 
Sbjct: 211 IGMRFRVCYESEDA-NERSAGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSP 269

Query: 359 WEIEPV 364
           WEIE V
Sbjct: 270 WEIERV 275


>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
          Length = 630

 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 146/354 (41%), Positives = 201/354 (56%), Gaps = 57/354 (16%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDG--QIPNYPNLP 77
           G K ++ TELW ACAG  V +P     V+YFPQGH EQVAA  +   DG  +IP Y +LP
Sbjct: 16  GVKDSLYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHMEIPVY-DLP 74

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQ---TEFFCK 134
           SK+LC ++++ L A+  +DEVYAQ+TL P    D    LR ++      P    T  F K
Sbjct: 75  SKILCKIMHIELKAEAFSDEVYAQVTLVPALKQDN---LRLEVEENDQIPSITTTYTFSK 131

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
            LT SDTSTHGGFSVP++ A++ FPPLD + Q PAQE++A+DL+                
Sbjct: 132 ILTPSDTSTHGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNGA-------------- 177

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL--SSSVLSSDSMHI 252
                                      E  ++ +GIRRA    +N+  SSS++S  SM +
Sbjct: 178 ---------------------------ESGEIRVGIRRATEHLSNVSQSSSLISGHSMQL 210

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
           GILA+A+HA ++ + F V+Y+P  +P EF+VPL  Y K+   +   +GMR +M  E EES
Sbjct: 211 GILASASHAVSSGTMFIVYYHPWTNPFEFIVPLRTYLKSTVPD-YPIGMRVQMQHEVEES 269

Query: 313 GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRN--RVSIWEIEPV 364
             RR+ GTI G  D+D +RW  S+WR L+V WD +   +K N  RV  W IEP+
Sbjct: 270 -LRRHAGTIIGHEDIDKIRWPGSEWRCLKVQWD-AVLDDKMNPERVCPWWIEPL 321


>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 388

 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 143/348 (41%), Positives = 195/348 (56%), Gaps = 32/348 (9%)

Query: 18  GGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLP 77
           G G+ ++++ +LW ACAG +  +P  G  V YFPQGH+EQ  A++  D+         +P
Sbjct: 13  GEGQPRSVDAQLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAV--DLSAAC-----VP 65

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS----NKPQTEFFC 133
           + L C +  V   AD  +DEV+A++ L P+   D  A+   D A +     ++P+   F 
Sbjct: 66  ALLPCRVSAVRFMADAHSDEVFAKIRLVPLRHGD-PAVDVGDAAAQGRPQDDRPKPASFA 124

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLT SD +  GGFSVPR  AE IFP LD+S +PP Q ++ RD+H + + FRHIYRG P+
Sbjct: 125 KTLTQSDANNGGGFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTPR 184

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSS-DSMHI 252
           RHLLTTGWS FV+ K+L AGDS++F+R +  ++ +G+RRA R   +   S       +  
Sbjct: 185 RHLLTTGWSNFVNQKKLLAGDSIVFLRSDGGEVHVGVRRAKRVFCDEGHSGWDHYRGLMR 244

Query: 253 GILAAAAHAAANNS-----------------PFTVFYNPRASPSEFVVPLAKYYKAVHSN 295
           G  A +  AAA                    PF V Y PRAS  EF V  A   +A    
Sbjct: 245 GGNAGSGDAAAKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCV-RAGAVRAAMQV 303

Query: 296 QISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQV 342
           Q   GMRF+M FETE+S     +MGT+ GI   DP RW  S WR LQV
Sbjct: 304 QWRPGMRFKMAFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQV 351


>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
 gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
          Length = 379

 Score =  245 bits (626), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/365 (39%), Positives = 192/365 (52%), Gaps = 44/365 (12%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E + ++ +LWHACAG +V +PA  + V YF QGH+E                   LP  +
Sbjct: 9   EVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLV 68

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDL-----ALKSNKPQTE---FF 132
           LC +  V   AD ++DEVYA++ L PV   + E     +L     A  + +P  E    F
Sbjct: 69  LCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEPSPEKPTSF 128

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            KTLT SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHIYRG P
Sbjct: 129 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTP 188

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA-------------- 238
           +RHLLTTGWS FV+ K+L AGDS++F+R    +L +GIRRA R                 
Sbjct: 189 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGY 248

Query: 239 ---NLSSSVLSSDS-----------------MHIGILAAAAHAAANNSPFTVFYNPRASP 278
                S+ +   +S                 + +  +  AA  A++  PF V Y PRAS 
Sbjct: 249 GGGGFSAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRAST 308

Query: 279 SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQW 337
            +FVV  A    A+     S GMRF+M FETE+S     +MGTI+ +   DP RW NS W
Sbjct: 309 PDFVVKAASVQAAMRIQWCS-GMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPW 367

Query: 338 RNLQV 342
           R LQV
Sbjct: 368 RLLQV 372


>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
 gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
          Length = 716

 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/393 (38%), Positives = 208/393 (52%), Gaps = 58/393 (14%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           +K ++ +LWHACAG +V +PA  + V YFPQGH+E   A++      +IP  P +P    
Sbjct: 5   EKILDPQLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIP--PLIP---- 58

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKSNKPQTEFFCKTLT 137
           C +L V   AD ETDEV+A + + P+P+    ++ E    S    ++N  +   F KTLT
Sbjct: 59  CRVLAVKFLADLETDEVFANVRMVPLPNSDLNFEEEGGFGSS-GSENNMEKPASFAKTLT 117

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H  +W FRHIYRG P+RHLL
Sbjct: 118 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLL 177

Query: 198 TTGWSLFVSGKRLFA-----------GDSVLFIRDEKQQ--------------------- 225
           TTGWS FV+ K+L A           GD  + IR  K+                      
Sbjct: 178 TTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCASDHPYGWNPGGGNCIPP 237

Query: 226 ---LLLGIRRANRQPANLSSSVLSSDSMHI---------GILAAAAHAAANNSPFTVFYN 273
              L + +R  + + +   S   S    ++          ++ AAA  AA+  PF V Y 
Sbjct: 238 YGGLTMFLRDDDNKLSRKGSLSSSGSGGNLRGKGKVRPESVMEAAA-LAASGQPFEVVYY 296

Query: 274 PRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRW 332
           PRAS  EF V  A   +A    Q   GMRF+M FETE+S     +MGTI+ +   DP+RW
Sbjct: 297 PRASTPEFCVK-ASSVRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRW 355

Query: 333 KNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            NS WR LQV WDE    +   RVS W +E V+
Sbjct: 356 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 388


>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
          Length = 715

 Score =  243 bits (619), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/391 (37%), Positives = 198/391 (50%), Gaps = 49/391 (12%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
           G       ++++LW ACAG + ++P  G  V YFPQGH+EQ A +   D+       P +
Sbjct: 12  GSSAADDAVDSQLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGAGAVDM-------PRV 64

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTL------QPVPSYDREALLRSDLALKSNKPQTE 130
           P  + C +  V   AD ++DEV+A++ L      +PV      A  R  L   ++  +  
Sbjct: 65  PDLVPCRVSAVRFMADPQSDEVFAKIRLLPLRRGEPVADVGEAAAAREPLQQDADNNKPA 124

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            F KTLT SD +  GGFSVPR  AE IFP LD+  +PP Q +  RD+H   + FRHIYRG
Sbjct: 125 SFAKTLTQSDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIYRG 184

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIR-----DEKQQLLLGIRRANRQPANLS---- 241
            P+RHLLTTGWS FV+ K+L AGDSV+F+R         ++ +GIRRA R          
Sbjct: 185 TPRRHLLTTGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVEGP 244

Query: 242 SSVLSSDSMHIGILAAAAHAAANNSP-------------------------FTVFYNPRA 276
           SS  S    + G++   A +  +                            F V Y PRA
Sbjct: 245 SSAASGWDHYRGLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLAAAGQVFEVVYYPRA 304

Query: 277 SPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNS 335
           S  EF V  A   KA    +   GMRF+M FETE+S     +MGT+ G+   DPV W  S
Sbjct: 305 STPEFCV-RAGAVKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVAGVCAADPVHWPQS 363

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
            WR LQV WDE    +   RV  W +E V++
Sbjct: 364 PWRLLQVSWDEPELLQNVKRVCPWLVELVSS 394


>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
           truncatula]
          Length = 648

 Score =  242 bits (617), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 143/395 (36%), Positives = 201/395 (50%), Gaps = 63/395 (15%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K+++ +LWHA AG +V +P   + V YFPQGH+E     +         +Y  +PS + C
Sbjct: 26  KSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPV------NFSSYSKIPSFIPC 79

Query: 83  ILLNVTLHADTETDEVYAQMTLQPV----PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
            +  +   A+ ETDEVYA++ L P+     S+D + +   +++   +K Q+  F KTLT 
Sbjct: 80  RVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQS--FAKTLTQ 137

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD +  GGFS PR  AE +FP LD+S  PP Q++  +D+H   W FRH+YRG PKRHLLT
Sbjct: 138 SDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLT 197

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS--SDSMHIGILA 256
           TGWS FVS K+L +GDS++F+R E   L +GIRRA R+  N+    LS       IGI A
Sbjct: 198 TGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRR-NNVGVDPLSGWKSGSGIGICA 256

Query: 257 A---------------------------------------------AAHAAANNSPFTVF 271
           A                                             A     N  PF V 
Sbjct: 257 APPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVV 316

Query: 272 YNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPV 330
           Y PR+   EF V  +    A+       GMRF+M  ETE+S     ++GT+  +   DP 
Sbjct: 317 YYPRSGTPEFFVKTSLIGMALQIRWCP-GMRFKMAIETEDSSRISWFIGTVASVQAADP- 374

Query: 331 RWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            W +S WR L+V WDE    +   RV+ W++E V+
Sbjct: 375 SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVS 409


>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
          Length = 360

 Score =  242 bits (617), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 181/337 (53%), Gaps = 37/337 (10%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV-AASMKKDIDGQIPNYPNLPS 78
           GE++ ++ +LWHACAG +V +P   + V YFPQGH+E         D+ G       LP 
Sbjct: 5   GEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARAR--PLPP 62

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF--FCKTL 136
            +LC +  V   AD ETDEV+A++ L P    + E     +  +     + +   F KTL
Sbjct: 63  LVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPREFGIDPEDAREKLSSFAKTL 122

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  AE IFP LD+   PP Q ++A+D+H  +W FRHI+RG P+RHL
Sbjct: 123 TQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHL 182

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILA 256
           LTTGWS FV+ K+L AGDS++F+R E  +L +GIRRA R        +   ++   G L+
Sbjct: 183 LTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALS 242

Query: 257 A------------------------------AAHAAANNSPFTVFYNPRASPSEFVVPLA 286
           A                              AA  AA+  PF V Y PRAS  EFVV  A
Sbjct: 243 AFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAA 302

Query: 287 KYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTIT 322
               A+  NQ   GMRF+M FETE+S     +MGTI 
Sbjct: 303 SVQNAMR-NQWCPGMRFKMAFETEDSSRISWFMGTIA 338


>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
          Length = 624

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/372 (38%), Positives = 194/372 (52%), Gaps = 67/372 (18%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
            +G G + + +  ELW ACAGPLV LP     V YF QGH EQ+       +  +     
Sbjct: 2   AQGAGRDPEELFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMF 61

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
            +P+K+LC        A+TETDE+YAQ+TLQP P       L      ++++P    FCK
Sbjct: 62  QVPNKILC-------KAETETDEMYAQITLQPEPDQVDLPQLPEPPLQETSRPVVHSFCK 114

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
            LT SDTSTHGGFSV RR A +  P LD SM  P QEL+ +DLH + W F+HIYRGQP+R
Sbjct: 115 ILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRR 174

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI 254
           HLLTTGWS FV+ K+L AGD+ +++R  + Q ++   R N+    L SS +  D      
Sbjct: 175 HLLTTGWSTFVTSKKLIAGDAFVYLRLSQSQYIV---RLNKY---LESSKIGFD------ 222

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
                                                       +GMRF+M FE ++   
Sbjct: 223 --------------------------------------------VGMRFKMSFEGDDVPI 238

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP--VTAPFFICP 372
           +++ GT+    DL P +W+ S+W+ L+V WDE+T      RVS WEIEP   +AP    P
Sbjct: 239 KKFSGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMP 297

Query: 373 P-PFFRSKHPRQ 383
             P  ++K PR+
Sbjct: 298 VQPSMKNKRPRE 309


>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
 gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
          Length = 1252

 Score =  239 bits (611), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 143/395 (36%), Positives = 201/395 (50%), Gaps = 63/395 (15%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K+++ +LWHA AG +V +P   + V YFPQGH+E     +         +Y  +PS + C
Sbjct: 26  KSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPV------NFSSYSKIPSFIPC 79

Query: 83  ILLNVTLHADTETDEVYAQMTLQPV----PSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
            +  +   A+ ETDEVYA++ L P+     S+D + +   +++   +K Q+  F KTLT 
Sbjct: 80  RVEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQS--FAKTLTQ 137

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD +  GGFS PR  AE +FP LD+S  PP Q++  +D+H   W FRH+YRG PKRHLLT
Sbjct: 138 SDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLT 197

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLS--SDSMHIGILA 256
           TGWS FVS K+L +GDS++F+R E   L +GIRRA R+  N+    LS       IGI A
Sbjct: 198 TGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRR-NNVGVDPLSGWKSGSGIGICA 256

Query: 257 A---------------------------------------------AAHAAANNSPFTVF 271
           A                                             A     N  PF V 
Sbjct: 257 APPYGGFPSFSGEEDNKLRRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGTNMQPFDVV 316

Query: 272 YNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPV 330
           Y PR+   EF V  +    A+       GMRF+M  ETE+S     ++GT+  +   DP 
Sbjct: 317 YYPRSGTPEFFVKTSLIGMALQIRWCP-GMRFKMAIETEDSSRISWFIGTVASVQAADP- 374

Query: 331 RWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            W +S WR L+V WDE    +   RV+ W++E V+
Sbjct: 375 SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVS 409



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/348 (36%), Positives = 178/348 (51%), Gaps = 45/348 (12%)

Query: 29   LWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNVT 88
            LWHA AG +V +P   + V YFPQGH+E     +          Y  +PS + C + ++ 
Sbjct: 810  LWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPV------NFSAYSKIPSFIPCRVEDIR 863

Query: 89   LHADTETDEVYAQMTLQPV----PSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
              A+ ETDEVYA++ L P+     S+D + +   +++   +K Q+  F KTLT SD +  
Sbjct: 864  YMANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQS--FAKTLTQSDANNG 921

Query: 145  GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
            GGFS PR  AE IFP +D+S  PP Q +  +D+H   W FRH+YRG PKRHLLTTGWS F
Sbjct: 922  GGFSCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPF 981

Query: 205  VSGKRLFAGDSVLFIRDEKQQLLLGIRRA-----------------------NRQPAN-- 239
            VS K+L +GDSV+F+R E  +L +GI R                        N+   N  
Sbjct: 982  VSDKKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEEDNKLRRNGK 1041

Query: 240  -----LSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHS 294
                 +S  ++    + +  +  A     N  PF V Y PR+   EF V  +     +  
Sbjct: 1042 GNGLLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGITLQI 1101

Query: 295  NQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQ 341
                 GMRF+M  ETE+S     ++GT+  +   DP  W +S WR LQ
Sbjct: 1102 RWCP-GMRFKMPIETEDSSRISWFIGTVASVQAADP-SWPDSLWRLLQ 1147


>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
 gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
          Length = 375

 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/361 (37%), Positives = 196/361 (54%), Gaps = 54/361 (14%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
             ++ LW ACAG +V +PA  + V+YFPQGH+E    +++   D +IP+Y      + C 
Sbjct: 15  CFDSRLWQACAGTMVKMPAVDSIVLYFPQGHAEHAGVNVEFRSDVKIPSY------IPCR 68

Query: 84  LLNVTLHADTETDEVYAQMTLQPV--------PSYDREALLRSDLALKSNKPQTEFFCKT 135
           + ++   A+ ETDEV+A++ L PV        P  +    + SD    S KP +  F KT
Sbjct: 69  VSSIKYMAERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSD---NSRKPLS--FAKT 123

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD +  GGFSVP+  A+ IFP LD+++ PP Q L A D+H   W FRHIYRG P+RH
Sbjct: 124 LTQSDANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIYRGTPERH 183

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA----------------- 238
           LLTTGWS FV+ K+L AGDS++F+R+E  ++ +GIRR  ++                   
Sbjct: 184 LLTTGWSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWWFPSVGNL 243

Query: 239 -----------------NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEF 281
                            N S S+++  ++    +  A   A N  PF V + P+++  EF
Sbjct: 244 TIPRGGFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYPQSTTPEF 303

Query: 282 VVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQ 341
            V  ++   A+     S GMRF+M FETE+     +MGTI+ +   DP +W +S WR LQ
Sbjct: 304 FVKASRVKAALQIPWCS-GMRFKMPFETEDLVISWFMGTISSVQANDPSQWPDSPWRMLQ 362

Query: 342 V 342
           V
Sbjct: 363 V 363


>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
 gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
          Length = 381

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/349 (38%), Positives = 184/349 (52%), Gaps = 32/349 (9%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G ++ ++ +LW ACAG +  +P  G  V YFPQGH+E        ++         +P+ 
Sbjct: 13  GAERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAA-----RVPAL 67

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           + C + +V   AD +TDEV+A++ L P+ + +   +     A      +   F KTLT S
Sbjct: 68  VPCRVASVRYMADPDTDEVFARIRLVPLRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           D +  GGFSVPR  AE IFP LD++  PP Q ++A+D+H   W FRHIYRG P+RHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR------------------QPANL- 240
           GWS FV+ K+L AGDS++F+R +   L +GIRRA R                  Q   L 
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247

Query: 241 ------SSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHS 294
                  ++      +    L  AA  A    PF V Y PRAS  EF V  A   +A   
Sbjct: 248 RGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCV-RAAAVRAAMR 306

Query: 295 NQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQV 342
            Q   GMRF+M FETE+S     +MGT+  +   DP+RW  S WR LQV
Sbjct: 307 VQWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQV 355


>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
          Length = 555

 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/348 (37%), Positives = 198/348 (56%), Gaps = 29/348 (8%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           GG    +  +LW  CAGPL + P  G           E++  S+  ++    P + N+PS
Sbjct: 17  GGTNNYLYDQLWKLCAGPLFDPPKIG-----------EELVTSINDELCQLKPVF-NIPS 64

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           K+ C + ++ L  +T TDE+YA+++L P    D   +       ++N    + F K L+A
Sbjct: 65  KIRCNVFSIKLKVETTTDEIYAEISLLP----DTSEVEIPTSKCENNIQNIKCFTKVLSA 120

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SDTS  GGF + +R A +  PPLD S   P+QE+ A D+H + W F+H  +G PKRHL T
Sbjct: 121 SDTSKKGGFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHLFT 180

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR-ANRQPANLSSSVLSSDSMHIGILAA 257
           +GW+ F   K+L  GDS +F+R E  +  +GI++ A+ Q  N+ SS++S +SMH G++A 
Sbjct: 181 SGWNEFAKAKKLVVGDSFIFLRGENGESRVGIKKAAHHQQENIPSSIISKESMHHGVVAT 240

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A +A  N   F VFY PR+  S+FVV + K+   V + + S+G RF M FE ++      
Sbjct: 241 ALNAIKNKCMFVVFYKPRS--SQFVVNIDKFRDGV-NKKFSIGSRFLMKFEGKD------ 291

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
                 IS+     WK+S+WR L+V WDE+    + ++VS WEIEP+T
Sbjct: 292 ---FNEISERFLPHWKDSEWRCLEVQWDEAATIPRPDKVSPWEIEPLT 336


>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
          Length = 694

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/325 (42%), Positives = 184/325 (56%), Gaps = 36/325 (11%)

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE-ALLRSDLALKSNKPQTEFFCK 134
           +P  +LC +L +   AD E+DEV+A++ L P+   D +    +     ++N  +T  F K
Sbjct: 100 IPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDGQEGNGFETNSEKTPSFAK 159

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H ++W FRHIYRG P+R
Sbjct: 160 TLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRR 219

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR-------------QPANLS 241
           HLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R              P   S
Sbjct: 220 HLLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRAKRGGIGNGPEYSPGWNPIGGS 279

Query: 242 ---SSVLSSDSMH------------IGILAA-----AAHAAANNSPFTVFYNPRASPSEF 281
              SS+L  D  +             G +AA     AA  A N   F V Y PRAS SEF
Sbjct: 280 CGYSSLLREDESNSLRRSNCSLADRKGKVAAESVIEAATLAINGRGFEVVYYPRASTSEF 339

Query: 282 VVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNL 340
            V       A+     S GMRF+M FETE+S     +MGT++ +S  DP+RW NS WR L
Sbjct: 340 CVKALDARAAMRIPWCS-GMRFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLL 398

Query: 341 QVGWDESTAGEKRNRVSIWEIEPVT 365
           QV WDE    +   RV+ W +E V+
Sbjct: 399 QVAWDEPDLLQNVKRVNPWLVELVS 423


>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
          Length = 202

 Score =  236 bits (601), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 113/204 (55%), Positives = 148/204 (72%), Gaps = 2/204 (0%)

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           AS TSTHGGFSV RR A++  PPLD +  PP QEL+A+DLH   W FRHI+RGQP+RHLL
Sbjct: 1   ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
            +GWS+FVS KRL AGD+ +F+R E  +L +G+RRA RQ +N++SSV+SS SMH+G+LA 
Sbjct: 61  QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A HA    + FTV+Y PR S SEF++P  KY  +V  N  S+G RF+M FE EE+  +R+
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSV-KNIYSIGTRFKMRFEGEEAPEQRF 179

Query: 318 MGTITGISDLDPVRWKNSQWRNLQ 341
            GTI G  +LD + W  S WR+L+
Sbjct: 180 TGTIVGSDNLDQL-WPESSWRSLK 202


>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
 gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
          Length = 593

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/396 (36%), Positives = 208/396 (52%), Gaps = 51/396 (12%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           ++N +LW A AG  V +P   + V YFPQGH +Q A S+  ++   + + P     +LC 
Sbjct: 15  SLNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQ-ATSLPNNLSPLLLSRP----YILCS 69

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYD----REALLRSDLALKSNKPQTEFFCKTLTAS 139
           +  V   AD +TDEV+A++ LQP+  +     R  ++ +D     +  +   F K LT S
Sbjct: 70  VSAVHFLADPKTDEVFAKLFLQPLNDFTVNFPRIPVIEAD-----DGERISSFAKILTPS 124

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           D +  GGFSVPR  A+ IFPPLD+SM PP Q L+  D+H   W FRHIYRG P+RHLLTT
Sbjct: 125 DANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTT 184

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI----- 254
           GWS FV+ K+L AGDSV+F+++ +  + +GIRRA R   N +SS + SD   + +     
Sbjct: 185 GWSKFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLCLPICGV 244

Query: 255 -------------LAAAAHAAANNSP---------------FTVFYNPRASPSEFVVPLA 286
                         A + H     SP               F V Y PRA  S+FV+  A
Sbjct: 245 RSRVDDEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSDFVLK-A 303

Query: 287 KYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWD 345
           +   A  S     GMR +M  ET++S  T  + G ++ +S  D   W+ S WR L + WD
Sbjct: 304 EVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRMLHITWD 363

Query: 346 ESTAGEKRNRVSIWEIEPV-TAPFFICP-PPFFRSK 379
           E    +    VS W++E + T P    P PP  R++
Sbjct: 364 EPEVLQTSKWVSPWQVELLSTTPSLHTPFPPLKRTR 399


>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
          Length = 451

 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 122/300 (40%), Positives = 187/300 (62%), Gaps = 7/300 (2%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           E+W AC+G L+++  AG  V YFP+ H EQ+  S  +++  ++    NLP K+LC +L++
Sbjct: 27  EIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKL-QLSNLPPKILCRVLHI 85

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLA-LKSNKPQTEFFCKTLTASDTSTHGG 146
            L  + ET+EVYA+  L  +P+ D+     +D + L + +PQ + FCK LT SD  ++ G
Sbjct: 86  RLLVEHETEEVYAETIL--IPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQSDIKSNWG 143

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
            SVP + A K FPPLD   + P QEL+A+DL  N W F+H ++GQP+RH LT GWS FV+
Sbjct: 144 LSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTNGWSTFVT 203

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            K+L AGD V+F+RDE  +L +GIRR + Q  ++ +S  S  SM + +LA A+HA A  S
Sbjct: 204 SKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVASHAFATKS 262

Query: 267 PFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
            F V+  P  +  S+F++ ++KY++   ++ I +GM  RM  E+E+    R    +  IS
Sbjct: 263 LFFVYQKPCYNKSSQFIMSMSKYFEG-GNHGIGVGMISRMQIESEDYCHVRRTNDLEQIS 321


>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/388 (35%), Positives = 193/388 (49%), Gaps = 47/388 (12%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + I+ ++W ACAG  V +PA  + V Y+PQGH E    S                S + C
Sbjct: 12  RVIDPKIWRACAGASVKIPALFSRVYYYPQGHVEHCCPSSSA----------VTASPIAC 61

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALL-RSDLALKSNKPQTEFFCKTLTASDT 141
           ++ ++ L AD  TDEV+A +TL P  + D+     +S    +    +   F K LTASD 
Sbjct: 62  VVSSIDLLADPITDEVFAHLTLHPAAAQDQFQFPPQSRFEEEDESEKVVTFAKVLTASDA 121

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           +  GGFSVPR  A+ +FPPLDF   PP Q+L   D+H  +W FRHIYRG P+RHLLTTGW
Sbjct: 122 NNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPRRHLLTTGW 181

Query: 202 SLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSM---HIGI---- 254
           S FV+ K+L  GDSV+F+R    ++ +G+RRA     +  SS    +     + G+    
Sbjct: 182 SKFVNSKKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGGYYGVKKED 241

Query: 255 -----------------LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQI 297
                            ++ A   A+   PF V Y P A  SEFVV  A+  +A  +   
Sbjct: 242 GGEKFRRVGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWSEFVV-RAEDVEASTNVYW 300

Query: 298 SLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVS 357
           + G R +M  ETE+S    +   I   +           W+ LQ+ WDE    +   RV+
Sbjct: 301 TPGTRVKMAMETEDSSRITWFQGIVSAT-------FQETWKQLQITWDEPEILQNLKRVN 353

Query: 358 IWEIEPVTAP----FFICPPPFFRSKHP 381
            W++E VTA         PPP  RSK+P
Sbjct: 354 PWQVEAVTASSTQLHATYPPPPKRSKYP 381


>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
 gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
          Length = 472

 Score =  229 bits (583), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 122/300 (40%), Positives = 187/300 (62%), Gaps = 7/300 (2%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           E+W AC+G L+++  AG  V YFP+ H EQ+  S  +++  ++    NLP K+LC +L++
Sbjct: 27  EIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKL-QLSNLPPKILCRVLHI 85

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLA-LKSNKPQTEFFCKTLTASDTSTHGG 146
            L  + ET+EVYA+  L  +P+ D+     +D + L + +PQ + FCK LT SD  ++ G
Sbjct: 86  RLLVEHETEEVYAETIL--IPNQDQNEPTAADFSPLDNPRPQFQSFCKCLTQSDIKSNWG 143

Query: 147 FSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVS 206
            SVP + A K FPPLD   + P QEL+A+DL  N W F+H ++GQP+RH LT GWS FV+
Sbjct: 144 LSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTNGWSTFVT 203

Query: 207 GKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNS 266
            K+L AGD V+F+RDE  +L +GIRR + Q  ++ +S  S  SM + +LA A+HA A  S
Sbjct: 204 SKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQSMEV-VLAVASHAFATKS 262

Query: 267 PFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGIS 325
            F V+  P  +  S+F++ ++KY++   ++ I +GM  RM  E+E+    R    +  IS
Sbjct: 263 LFFVYQKPCYNKSSQFIMSMSKYFEG-GNHGIGVGMISRMQIESEDYCHVRRTNDLEQIS 321


>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
          Length = 631

 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 116/168 (69%), Positives = 137/168 (81%), Gaps = 2/168 (1%)

Query: 215 SVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNP 274
           S   +R++  QLLLGIRRANR    + SSVLSSDSMHIG+LAAAAHAA+ NS FT+FYNP
Sbjct: 2   SHCLVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNP 61

Query: 275 RASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKN 334
           RASPSEFV+PLAKY KAV+  +IS+GMRFRM+FETEES  RRYMGTITGISDLD VRW N
Sbjct: 62  RASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPN 121

Query: 335 SQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA-PFFICPPPFFRSKHP 381
           S WR+++VGWDESTAG+++ RVS+WEIEP+T  P +  P P  R K P
Sbjct: 122 SHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTSPFP-LRLKRP 168


>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
           [Vitis vinifera]
          Length = 593

 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/375 (37%), Positives = 203/375 (54%), Gaps = 38/375 (10%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E + ++  +W ACAG  V++PA  + V YFPQGH EQ  AS    +   + + P++    
Sbjct: 8   ELRPLDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLSPLVFSKPSV---- 61

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVP-SYDREALLRSDLALKSNKPQTEF------FC 133
           LC ++ V   AD +TDEV+A++ L+PV  S++   + R  +    +  + E       F 
Sbjct: 62  LCRVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFV 121

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           K LT+SD +  GGFSVPR  A+ IFPPL+F   PP Q L+  DL    W FRHIYRG P+
Sbjct: 122 KILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPR 181

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFI-RDEKQQLLLGIRRANRQPAN------LSSSVLS 246
           RHLLTTGWS FV+ K+L AGDSV+F+ R+   +L +G+RR  R   N       S+   +
Sbjct: 182 RHLLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGA 241

Query: 247 SDSMHIGILAAAAHAAANNS----------------PFTVFYNPRASPSEFVVPLAKYYK 290
             +  +G +   + +++                   PF V Y PR   S+FVV  A+  +
Sbjct: 242 VKAKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVK-AEVVE 300

Query: 291 AVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
              S   + GMR +M  ETE+S  T  + GT++  + +D   W+ S WR LQV WDE   
Sbjct: 301 EALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQVTWDEPEV 360

Query: 350 GEKRNRVSIWEIEPV 364
            +   RVS W++E V
Sbjct: 361 LQNVMRVSPWQVELV 375


>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
          Length = 502

 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 185/368 (50%), Gaps = 41/368 (11%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
            ++ ++W ACA PL  LPA G  V YFP GHSEQ   ++   +      +P+L     C 
Sbjct: 10  VVDRDVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAPLP-----HPHL---FPCT 61

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           +  V L AD  TDE +A ++L P P       L       +  P    + K LT SD + 
Sbjct: 62  VAAVALSADPSTDEPFATISLVPGP----HRALGGGAPHHAVDPAFAHYAKQLTQSDANN 117

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
            GGFSVPR  A+ +FP LDF   PP Q L  RDL   +W FRHIYRG P+RHLLTTGWS 
Sbjct: 118 GGGFSVPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLLTTGWSR 177

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA---------NLSSSVLSSDSMHIGI 254
           FV+ K L AGD+V+F+R    +LL G+RR  R P          N  + V + +      
Sbjct: 178 FVNAKLLVAGDAVVFMRRPDGELLAGVRRTPRYPVSQDPAEPPRNARARVPAQE------ 231

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGT 314
           +  AA  AA  +PFTV Y PR    EFVVP  +   A+ S     G + RM F   E   
Sbjct: 232 VEDAARRAAQGAPFTVTYYPRQGAGEFVVPRKEVEDALISPW-EPGTQVRMQFLHPEDRR 290

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNR-VSIWEIEPVTAPFFICPP 373
             ++  +    D       +S WR L++ WDES     +NR V+ W+++ V      CPP
Sbjct: 291 SEWINGVVRAVD-------HSIWRMLEIDWDESAPPSLKNRHVNAWQVQLVG-----CPP 338

Query: 374 PFFRSKHP 381
              R + P
Sbjct: 339 LLKRLRIP 346


>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
          Length = 881

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 113/185 (61%), Positives = 130/185 (70%), Gaps = 6/185 (3%)

Query: 272 YNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVR 331
           YNPR SPSEFVVPLAKY KA +  Q+S+GMRFRMMFETEES  RRYMGTITGISDLDPVR
Sbjct: 2   YNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPVR 61

Query: 332 WKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQAD--DDAS 389
           W NSQWRNLQVGWDES AG+K+NRVSIWEIE V  PFFIC PPFFR K P       + S
Sbjct: 62  WPNSQWRNLQVGWDESGAGDKQNRVSIWEIETVATPFFIC-PPFFRLKRPLLPGILGEDS 120

Query: 390 DLDNVFKRTMPWIGDDFGVKDSQS-LPGLSLVQWMNMQQNPSLANAMQSS--YMHSLPGS 446
           +++   KR+ PW+ ++  V D Q+ LPG  L  WM +QQ   + N   S   Y     G+
Sbjct: 121 EIEAASKRSFPWLREENDVLDFQNPLPGAGLDAWMGLQQRNGVMNPNSSGDLYRSMAGGA 180

Query: 447 ILQNL 451
            LQ L
Sbjct: 181 ALQEL 185



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 5/122 (4%)

Query: 871 DASQDGEVPVDPRSNIPYGANIDGPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYE 930
           + S D +   DPR+N+ +G NI+  L  ++    L      + KD    +S+ ++++   
Sbjct: 657 NGSYDNDFQADPRNNVLFGVNIENNLADVSTTSTLVSREFNVVKDAPCQLSAESIVSTLS 716

Query: 931 NSKDA--QQELSSSIVSQSFGVPDMAFNS-IDSTINDSSFLNGGPWAPPPQFPQRMRTYT 987
            +KD   Q   +S + S S GV D+  NS + ST+ D+ FL   P    P  P  MRTYT
Sbjct: 717 TTKDVQPQLSSASILSSHSLGVQDLPDNSDVASTVEDNHFLQRAPTYQQPAPP--MRTYT 774

Query: 988 KV 989
           KV
Sbjct: 775 KV 776


>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 572

 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/411 (35%), Positives = 200/411 (48%), Gaps = 58/411 (14%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           S   G    + ++  +W ACAG  V +P   + V YFPQGH E             I   
Sbjct: 5   SATAGDINHRQVDPRIWRACAGASVQIPLLYSRVYYFPQGHVEHCCP--------LISTL 56

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVP-------SYDREALLRSDLALKSNK 126
           P+  S + C++ ++ L AD  TDEV+A + LQPV        +Y R      D+   +NK
Sbjct: 57  PSSTSPVPCLITSIQLLADPITDEVFAHLVLQPVTQEQFTPTNYSRFGRYDGDVD-DNNK 115

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
             T  F K LT SD +  GGFSVPR  A+ +FPPLDF + PP Q+L   D+H  +W FRH
Sbjct: 116 VTT--FAKILTPSDANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRH 173

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA------------- 233
           IYRG P+RHLLTTGWS FV+ K+L AGDSV+F++    ++ +G+RR              
Sbjct: 174 IYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYG 233

Query: 234 --NRQPANLSSSVLSSDSMHI---------GILAAAA-----HAAANNSPFTVFYNPRAS 277
                     SSV   D             G L A A     + AA   PF V Y P A 
Sbjct: 234 GDEYNGYYSQSSVAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAG 293

Query: 278 PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQW 337
            SEFVV  A+  ++  S   + G R +M  ETE+S    +   I   +  +   W+ S W
Sbjct: 294 WSEFVV-RAEDVESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPW 352

Query: 338 RNLQVGWDESTAGEKRNRVSIWEIEPVT------APFFICPPPFFRSKHPR 382
           + LQ+ WDE    +   RV+ W++E V       A F    PP  R K+P+
Sbjct: 353 KQLQITWDEPEILQNVKRVNPWQVEIVANATQLHATF----PPAKRLKYPQ 399


>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
 gi|224030297|gb|ACN34224.1| unknown [Zea mays]
 gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
 gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
 gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
          Length = 513

 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 135/365 (36%), Positives = 184/365 (50%), Gaps = 44/365 (12%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ ++W ACA PL  LPA G  V YFP GH+EQ  A +   +          P    C +
Sbjct: 18  VDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQCPAHLPAPLPA--------PHLFPCTV 69

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
             V+L AD ET+EV+A+++L P P     A  R+D        +  +F K LT SD +  
Sbjct: 70  AGVSLGADDETNEVFAKISLSPGPHRGPAAACRTDPTSDCPPQELSYFTKELTQSDANNG 129

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPR  A+ IFP LDF   PP Q+L  RD   N W FRHIYRG P+RHLLTTGWS F
Sbjct: 130 GGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRRHLLTTGWSRF 189

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ-------------------PANLSSSVL 245
           V+ K L AGD V+F+R     L++G+RR  R                    P N  + V 
Sbjct: 190 VNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQPPPRNARARVP 249

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
             D +       AA  AA    F V Y PR +  EF+VP  +  + V + +   G + RM
Sbjct: 250 PQDVIE------AARLAAEGRSFAVTYFPRQAAGEFIVPRDE-VEGVLATRWEPGAQVRM 302

Query: 306 -MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDEST--AGEKRNRVSIWEIE 362
            + E E+  TRR +     +  L       + WR L++ WD+S+  +      V+ W++E
Sbjct: 303 QVMEAED--TRRTVWADGHVKSL-----HQNIWRALEIDWDDSSPLSPNLSRFVNAWQVE 355

Query: 363 PVTAP 367
            VT P
Sbjct: 356 LVTHP 360


>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 529

 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 137/356 (38%), Positives = 179/356 (50%), Gaps = 41/356 (11%)

Query: 26  NTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL--CI 83
           + ++W ACA PL  +P  G+ V YFP GHSEQ             P  P  P+  L  C 
Sbjct: 24  DRDVWLACATPLSRVPVVGSQVYYFPHGHSEQC------------PTPPRAPAHNLFPCT 71

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           +  V L AD +TDE +A ++L P P       L    A +       ++ K LT SD + 
Sbjct: 72  VAAVRLFADPKTDEPFATVSLVPGPHRAPAPDLPHASARRPEPTAFRYYAKQLTQSDANN 131

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
            GGFSVPR  AE +FPPLDF   PP Q L   D     W FRHIYRG P+RHLLTTGWS 
Sbjct: 132 GGGFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSK 191

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRA-----------NRQPANLSSSVLSSDSMHI 252
           FV+ K L AGD+V+F+R    +LL GIRRA            R+P N  + V   +    
Sbjct: 192 FVNAKLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRNARARVPPQE---- 247

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF-ETEE 311
             +  A   AA  +PFTV Y PR    EFVVP  +  +A+       G++ RM F + EE
Sbjct: 248 --VDDAVRLAAEGAPFTVTYYPRQGAGEFVVPKQEVEEAL-VGAWRPGVQVRMKFLDAEE 304

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
             +    G +  +   DP     + WR L++ W ES AG     V+ W++E V  P
Sbjct: 305 RRSEWINGVVKAV---DP-----NIWRMLEINWAESVAGSLNRYVNAWQVEHVGHP 352


>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
          Length = 336

 Score =  222 bits (566), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 107/216 (49%), Positives = 150/216 (69%), Gaps = 6/216 (2%)

Query: 150 PRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKR 209
           PRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+
Sbjct: 1   PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKK 60

Query: 210 LFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS--MHIGILAAAAHAAANNSP 267
           L +GD+VLF+R    +L LG+RRA +  A   S+ L++ S  +++  +    +A ++ + 
Sbjct: 61  LVSGDAVLFLRTADGELRLGVRRAAQ--AKTCSNYLAAYSQLLNVSGIVDVVNAISSTNA 118

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           F++ YNPRAS S F++P  K+ K + ++  S GMRF+M  ETE++  +R+ G + G+SD+
Sbjct: 119 FSICYNPRASSSGFIIPYHKFSKTL-AHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDV 177

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           DPVRW  S+WR L V WD+     + NRVS WEIEP
Sbjct: 178 DPVRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEP 212


>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
 gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
          Length = 518

 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 140/380 (36%), Positives = 193/380 (50%), Gaps = 59/380 (15%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ ++W ACA PL  LP  G  V YFP GH+EQ  A +   I          P    CI+
Sbjct: 14  VDRDVWLACAVPLSRLPTVGAEVYYFPHGHAEQCPAHLPAPIPA--------PHLFPCIV 65

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREA---LLRSDLALKSNKPQTE----------- 130
            N+TL AD +T+EV+A+++L P P +   A   L+  D    + + +++           
Sbjct: 66  TNLTLGADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPPHPQPQELS 125

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
           +F K LT SD +  GGFSVPR  A+ IFP LDF   PP Q L+ RD   N W FRHIYRG
Sbjct: 126 YFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRG 185

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQ-------------- 236
            P+RHLLTTGWS FV+ K L AGD V+F+R     L++G+RR  R               
Sbjct: 186 TPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPRYPLVFPGADANANAN 245

Query: 237 ------PANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYK 290
                 P N  + V   D M       AA  AA   PFTV Y PR +  EFVVP  +  +
Sbjct: 246 QDQQPPPRNARARVPPQDVME------AARLAAEGRPFTVTYFPRQAAGEFVVPRDEVER 299

Query: 291 AVHSNQISLGMRFRM-MFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
           A+ + +   G   RM + E E+  TRR +     +  L       + WR L++ WD+S+ 
Sbjct: 300 AL-ATRWEPGTEVRMQVMEAED--TRRTVWADGHVKAL-----HQNIWRALEIDWDDSSP 351

Query: 350 -GEKRNR-VSIWEIEPVTAP 367
              K +R V+ W+++ V  P
Sbjct: 352 LSLKLSRFVNAWQVQLVAYP 371


>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
 gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
          Length = 550

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/373 (36%), Positives = 188/373 (50%), Gaps = 52/373 (13%)

Query: 29  LWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL------C 82
           LW A +G   ++   G+ V YF QGH EQ                P L   +L      C
Sbjct: 6   LWRAFSGNSAHIHTVGSEVYYFVQGHLEQATY------------VPTLSRSVLSNPITKC 53

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN----KPQTEFFCKTLTA 138
           I+      AD  +DEV  ++ L P+P     + +    +   +    + + E F K LT+
Sbjct: 54  IVSAADYTADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLTS 113

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD +  GGFSVPR  A+ IFPPL++ ++PP Q L   D+H  +W FRHIYRG P+RHLLT
Sbjct: 114 SDANNGGGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLT 173

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSS----------- 247
           TGWS FV+ K+L AGD+V+F RD  + + +GIRR+++       S  +S           
Sbjct: 174 TGWSKFVNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNVE 233

Query: 248 ------------DSMHIG-----ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYK 290
                          +IG      +A AA  AA   PF V Y PR   SEFV+P  K   
Sbjct: 234 EKRSGDRSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEKVNN 293

Query: 291 AVHSNQISLGMRFRMMFETEES-GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
           +++  Q   G+R +M  ETE+S  T+ Y GT+T  S      WK S WR L+V W+E+ A
Sbjct: 294 SLNY-QWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDA 352

Query: 350 GEKRNRVSIWEIE 362
            +    VS WE+E
Sbjct: 353 LQSAKFVSPWEVE 365


>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
 gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
 gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
 gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
          Length = 585

 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/411 (34%), Positives = 199/411 (48%), Gaps = 58/411 (14%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           S   G    + ++  +W ACAG  V +P   + V YFPQGH E     +           
Sbjct: 5   SATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLS--------TL 56

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVP-------SYDREALLRSDLALKSNK 126
           P+  S + CI+ ++ L AD  TDEV+A + LQP+        +Y R      D+   +NK
Sbjct: 57  PSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVD-DNNK 115

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
             T  F K LT SD +  GGFSVPR  A+ +FP L+F + PP Q+L   D+H  +W FRH
Sbjct: 116 VTT--FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRH 173

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA------------- 233
           IYRG P+RHLLTTGWS FV+ K+L AGDSV+F+R    ++ +G+RR              
Sbjct: 174 IYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYG 233

Query: 234 --NRQPANLSSSVLSSD----------SMHIGILAAAAHAAANNS----PFTVFYNPRAS 277
                     SSV   D          S +  + A A   A N +    PF V + P A 
Sbjct: 234 GDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAG 293

Query: 278 PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQW 337
            SEFVV  A+  ++  S   + G R +M  ETE+S    +   I   +  +   W+ S W
Sbjct: 294 WSEFVV-RAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPW 352

Query: 338 RNLQVGWDESTAGEKRNRVSIWEIEPVT------APFFICPPPFFRSKHPR 382
           + LQ+ WDE    +   RV+ W++E          PF    PP  R K+P+
Sbjct: 353 KQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPF----PPAKRLKYPQ 399


>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
          Length = 336

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 107/216 (49%), Positives = 149/216 (68%), Gaps = 6/216 (2%)

Query: 150 PRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKR 209
           PRRAAE  FPPLD+  Q P+QEL+A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+
Sbjct: 1   PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKK 60

Query: 210 LFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS--MHIGILAAAAHAAANNSP 267
           L +GD+VLF+R    +L LG+RRA +  A   S+ L++ S  +++  +     A ++ + 
Sbjct: 61  LVSGDAVLFLRTADGELRLGVRRAAQ--AKTCSNYLAAYSQLLNVSGIVDVVKAISSTNA 118

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           F++ YNPRAS S F++P  K+ K + ++  S GMRF+M  ETE++  +R+ G + G+SD+
Sbjct: 119 FSICYNPRASSSGFILPYHKFSKTL-AHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDV 177

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           DPVRW  S+WR L V WD+     + NRVS WEIEP
Sbjct: 178 DPVRWPGSKWRCLLVRWDDLDV-SRHNRVSPWEIEP 212


>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
          Length = 596

 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 142/411 (34%), Positives = 199/411 (48%), Gaps = 58/411 (14%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           S   G    + ++  +W ACAG  V +P   + V YFPQGH E     +           
Sbjct: 5   SATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLS--------TL 56

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVP-------SYDREALLRSDLALKSNK 126
           P+  S + CI+ ++ L AD  TDEV+A + LQP+        +Y R      D+   +NK
Sbjct: 57  PSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVD-DNNK 115

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
             T  F K LT SD +  GGFSVPR  A+ +FP L+F + PP Q+L   D+H  +W FRH
Sbjct: 116 VTT--FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRH 173

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA------------- 233
           IYRG P+RHLLTTGWS FV+ K+L AGDSV+F+R    ++ +G+RR              
Sbjct: 174 IYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYG 233

Query: 234 --NRQPANLSSSVLSSD----------SMHIGILAAAAHAAANNS----PFTVFYNPRAS 277
                     SSV   D          S +  + A A   A N +    PF V + P A 
Sbjct: 234 GDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAG 293

Query: 278 PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQW 337
            SEFVV  A+  ++  S   + G R +M  ETE+S    +   I   +  +   W+ S W
Sbjct: 294 WSEFVV-RAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPW 352

Query: 338 RNLQVGWDESTAGEKRNRVSIWEIEPVT------APFFICPPPFFRSKHPR 382
           + LQ+ WDE    +   RV+ W++E          PF    PP  R K+P+
Sbjct: 353 KQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPF----PPAKRLKYPQ 399


>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
          Length = 588

 Score =  219 bits (559), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 142/370 (38%), Positives = 205/370 (55%), Gaps = 43/370 (11%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K +++ +LW+ACAGP   +P  GT V YFPQGH+E   A+   ++        + P  + 
Sbjct: 30  KGSVHPQLWYACAGPTCTVPPVGTAVYYFPQGHAEHAGAAADANL--------HAPPFVP 81

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYD-----REALLRSDLALKSNKPQTEFF--CK 134
           C +  V   A+ +TDE++ ++ L P+ S +      EA + +D A    +P        K
Sbjct: 82  CRVAGVRFMAELDTDEIFVKIRLDPLRSGEPLTDVGEAQVVNDEA-GQRQPTRPVISSAK 140

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD+ + G  SV R  AE IFP LD S++ P Q + ARD+H   WTFRH+YRG P+R
Sbjct: 141 TLTKSDSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTPER 200

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP-----------ANLSSS 243
           +LLTTGWS FV+ K++  GDSV+F+R+E   + +G+RRA R              N S +
Sbjct: 201 NLLTTGWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERASRRNAYGRQLVRGNASGT 260

Query: 244 VLSSDSMHIGILAA------AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQI 297
             ++D    G+L A      A   AA  +PF V + PRA+   F V +A   +A+   Q+
Sbjct: 261 GAAAD----GVLRAEDVVAAAVTLAAAGNPFEVVHYPRATAPAFCVRVATVIEAL---QV 313

Query: 298 SL--GMRFRMMFETEE-SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRN 354
           S   G+RF+M FE ++ S    +MGT+ G+   DP RW  S WR LQV WDE       N
Sbjct: 314 SWCPGLRFKMAFEAKDLSRISWFMGTVAGVGPADPARWPLSPWRFLQVTWDEPELVRNMN 373

Query: 355 RVSIWEIEPV 364
           R+S W++E V
Sbjct: 374 RLSPWQVELV 383


>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
 gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
          Length = 521

 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 140/405 (34%), Positives = 203/405 (50%), Gaps = 55/405 (13%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAAS----MKKDIDGQIPNYPNLPS 78
           + + +++W  CAGP VN+P   + V YFP GH E    S        IDG  P++P    
Sbjct: 7   RRVKSKIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNPQTITVIDGYGPSFP---- 62

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF--FCKTL 136
              CI+  V L AD  TDEV+A++ L PV     E     ++  + +    +F  F KTL
Sbjct: 63  ---CIITAVDLLADPHTDEVFAKLLLSPV----TEGQEFPEVVDEEDDGGDKFVSFVKTL 115

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD++  GGFSVPR  A+ IFP LD +   P+Q+L   D+HD +W F H+YRG+PKRHL
Sbjct: 116 TKSDSNNGGGFSVPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHL 175

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR------ANRQPANLSSSVLSSDSM 250
            TTGW+ FV+ K+L AGDS++F+++    +++GIRR      A  +  N        + +
Sbjct: 176 FTTGWTPFVNTKKLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGL 235

Query: 251 HI-----------GILA-----AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHS 294
            +           G+L       A   A  N  F V Y PRA+   FVV       A+  
Sbjct: 236 EVKREGFSRGGRRGMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVDANVVDDAMKI 295

Query: 295 NQISLGMRFRMMFETEESGTRRYM-----GTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
              S GMR ++  + +ES   +       GTI+ +S +         WR LQV WDE   
Sbjct: 296 GWAS-GMRVKLPLKIDESSNSKMTFFQPQGTISNVSSV-------PNWRMLQVNWDELEI 347

Query: 350 GEKRNRVSIWEIEPVT-APFFICPPPFFRSKHPRQADDDASDLDN 393
            + +NRV+ W++E ++  P      PF  +K PR   D A   D+
Sbjct: 348 LQNQNRVNPWQVELISHTP--AVHLPFLSTKKPRLVQDSALFCDD 390


>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
          Length = 585

 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 141/411 (34%), Positives = 199/411 (48%), Gaps = 58/411 (14%)

Query: 14  SGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY 73
           S   G    + ++  +W ACAG  V +P   + V YFPQGH E     +           
Sbjct: 5   SATAGDINHREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLS--------TL 56

Query: 74  PNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVP-------SYDREALLRSDLALKSNK 126
           P+  S + CI+ ++ L AD  TDEV+A + LQP+        +Y +      D+   +NK
Sbjct: 57  PSSTSPVPCIITSIQLLADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGDVD-DNNK 115

Query: 127 PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
             T  F K LT SD +  GGFSVPR  A+ +FP L+F + PP Q+L   D+H  +W FRH
Sbjct: 116 VTT--FAKILTPSDANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRH 173

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA------------- 233
           IYRG P+RHLLTTGWS FV+ K+L AGDSV+F+R    ++ +G+RR              
Sbjct: 174 IYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYG 233

Query: 234 --NRQPANLSSSVLSSD----------SMHIGILAAAAHAAANNS----PFTVFYNPRAS 277
                     SSV   D          S +  + A A   A N +    PF V + P A 
Sbjct: 234 GDEYNGYYSQSSVAKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAG 293

Query: 278 PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQW 337
            SEFVV  A+  ++  S   + G R +M  ETE+S    +   I   +  +   W+ S W
Sbjct: 294 WSEFVV-RAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPW 352

Query: 338 RNLQVGWDESTAGEKRNRVSIWEIEPVT------APFFICPPPFFRSKHPR 382
           + LQ+ WDE    +   RV+ W++E          PF    PP  R K+P+
Sbjct: 353 KQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPF----PPAKRLKYPQ 399


>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
 gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
          Length = 622

 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 139/375 (37%), Positives = 201/375 (53%), Gaps = 41/375 (10%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + ++  +W A AG  V +P  GT V YFPQGH+E    +    +       P +P+ +LC
Sbjct: 9   REVDPIVWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTSPAVMS------PGMPAFILC 62

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVP-SYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
            +L+V   A+++TDEVYA++ L P+  S   E  +R +  ++        F K LT SD 
Sbjct: 63  RVLSVRFLAESDTDEVYARIFLHPISQSEVDEVTMREEEVVEDEIVS---FVKILTPSDA 119

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGW 201
           +  GGFSVPR  A+ I+P LDF  +PP Q L  RD+    W FRHIYRG P+RHLLTTGW
Sbjct: 120 NNGGGFSVPRFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGW 179

Query: 202 SLFVSGKRLFAGDSVLFI-RDEKQQLLLGIRRANRQPAN---LSSSVLSSDSMHIG---- 253
           S FV+ K+L AGDS +F+ R    QL +G+RRA R+  +    +SS L  + ++ G    
Sbjct: 180 SKFVNSKQLVAGDSAVFMRRTANNQLYVGVRRAIRRNDDSQKWTSSFLMREHINNGGSPD 239

Query: 254 -------------ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG 300
                         +AA A  AA   PF V   PR + + FVV   +   A++    ++G
Sbjct: 240 VSWGIRKGRMTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVKAQEVQMALNM-PWTVG 298

Query: 301 MRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIW 359
           MR +M  E E+S  T  Y GT++ +   +   W+ S WR LQ+ W+E    +  NRV+ W
Sbjct: 299 MRVKMAVEAEDSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRVNPW 358

Query: 360 EIEPVTAPFFICPPP 374
           ++E        C PP
Sbjct: 359 QVE--------CFPP 365


>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
          Length = 546

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/362 (36%), Positives = 187/362 (51%), Gaps = 37/362 (10%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVA-ASMKKDIDGQIPNYPNLPSKLL 81
           + ++ ++W ACAG  V +P+  + V YFPQGH E    +S+        P        + 
Sbjct: 13  REVDPQIWRACAGASVQIPSLYSRVYYFPQGHVEHSCPSSLISSFSTAAP--------VP 64

Query: 82  CILLNVTLHADTETDEVYAQMTLQPV------PS----YDREALLRSDLALKSNKPQTEF 131
           C++  V L AD  TDEV+A + LQP+      PS    +  +    ++     NK  T  
Sbjct: 65  CVVSAVELLADPITDEVFAHLALQPISPEHFSPSNFSGFGSDDDDDNNSNSNKNKVVT-- 122

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           F K LT SD +  GGFSVPR  A+ +FPPLDF   PP Q+L   D+H  +W FRHIYRG 
Sbjct: 123 FAKILTPSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWDFRHIYRGT 182

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA---NRQPANLSSSVLSSD 248
           P+RHLLTTGWS FV+GK+L AGDSV+F+R    ++ +G+RRA   N              
Sbjct: 183 PRRHLLTTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPISNHGDEYYGGGKKGFR 242

Query: 249 SMHIGILAAAAHAAANNS-----PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRF 303
            + +G L A A + A N      PF V Y P A  S+FVV  A+  +   +   S G R 
Sbjct: 243 RIGMGKLTAEAVSEAVNKAVQGYPFEVVYYPTAGWSDFVV-RAEDVEVFMAGYWSPGTRV 301

Query: 304 RMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           +M  ETE+S     + G ++          +   W+ LQ+ WDE    +   RV+ W++E
Sbjct: 302 KMAMETEDSSRVTWFQGVVSSTFQ------ETGLWKQLQITWDEPEILQNLKRVNPWQVE 355

Query: 363 PV 364
            V
Sbjct: 356 VV 357


>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
          Length = 648

 Score =  214 bits (544), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 112/274 (40%), Positives = 164/274 (59%), Gaps = 22/274 (8%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKD-IDGQIPNYPNLPSKLLCILLN 86
           E+W AC+G L+++P  G  V YFP+ H +Q+  S   + I G      +LP K+LC +L+
Sbjct: 23  EIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLEWIQGL--QLSHLPRKILCRVLH 80

Query: 87  VTLHADTETDEVYAQMTLQP--------VPSYDREALLRSDLALKSNKPQTEFFCKTLTA 138
           + L  + +T+EVYA+  L P         P +           L+  +PQ + FCK LT 
Sbjct: 81  IRLLVEHDTEEVYAETILLPNQEQNEPSTPEF---------CPLEPPRPQYQSFCKALTT 131

Query: 139 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLT 198
           SD  ++ G SV R+ A K FPPLD   + P QEL+  DL  N W F+H+++GQP+RHLL 
Sbjct: 132 SDIKSNWGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHVFQGQPRRHLLK 191

Query: 199 TGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAA 258
            GWS FV+ K+L AGD V+F+RDE  +L +GIRR + Q  ++ SS  S  SM  G+LA A
Sbjct: 192 HGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSRQSME-GVLAVA 250

Query: 259 AHAAANNSPFTVFYNPRAS-PSEFVVPLAKYYKA 291
           +HA A  S F+V+Y P  +  S+F++ L+ Y++ 
Sbjct: 251 SHAFATRSLFSVYYKPCYNRSSQFIMSLSNYFEG 284


>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
          Length = 1160

 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 144/381 (37%), Positives = 194/381 (50%), Gaps = 49/381 (12%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK--LL 81
            ++  LW  CAG  V +P   + V YFPQGH +Q A+S  +++       P L SK  +L
Sbjct: 15  VLDPALWLVCAGTTVEIPTLHSRVYYFPQGHFDQ-ASSAPRNLS------PLLLSKPAVL 67

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE-----FFCKTL 136
           C + +V   AD  TDEV+A++ L PV             A  S   QT       F K L
Sbjct: 68  CRVESVQFLADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVL 127

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           TASD +  GGFSVPR  A+ IFPPL+F   PP Q L+  D+H  +W FRHIYRG P+RHL
Sbjct: 128 TASDANNGGGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHL 187

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR--------------------- 235
           LTTGWS FV+ K+L AGD V+F+++    L +GIRRA R                     
Sbjct: 188 LTTGWSTFVNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEE 247

Query: 236 -----QPANLSSSVLSSDSMHIGILAA-----AAHAAANNSPFTVFYNPRASPSEFVVPL 285
                +       V S D    G L+A     AA  AA N PF V Y P+   SEFVV  
Sbjct: 248 EEEEEEEEEEVREVFSRDGR--GKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVKT 305

Query: 286 AKYYKAVHSNQISLGMRFRMMFETEESGTRRYM-GTITGISDLDPVRWKNSQWRNLQVGW 344
               +A+     S G+R ++  ET++S    +  GT++ ++     +W+ S WR LQV W
Sbjct: 306 EAVNEAMKV-AWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTW 364

Query: 345 DESTAGEKRNRVSIWEIEPVT 365
           DE    +    VS W++E V+
Sbjct: 365 DEPEGLQIAKWVSPWQVELVS 385


>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
 gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
          Length = 603

 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/382 (35%), Positives = 189/382 (49%), Gaps = 41/382 (10%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + ++  +W ACAG  V +P   + V YFPQGH EQ + S        + +       + C
Sbjct: 12  RRVDRRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPVIPC 71

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREA-LLRSDLALK--------SNKPQTEFFC 133
            +  V   AD  TDEVY ++ L P+ S++    +L     L+         ++ +   F 
Sbjct: 72  QISAVQFLADPVTDEVYTKLLLFPIDSFNPSVPVLEHSGNLEQHHGYDYDDDEDKIVAFA 131

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           K LT SD +  GGFSVPR  A+ IFPPL++  +PP Q L   D+H   W FRHIYRG P+
Sbjct: 132 KILTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYRGTPR 191

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS---------SV 244
           RHLLTTGWS FV+ K+L AGDSV+F+R+   ++ +G+RRA R P N  S         + 
Sbjct: 192 RHLLTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVR-PNNGGSDCARWREQIAC 250

Query: 245 LSSDSMHIGI-------------------LAAAAHAAANNSPFTVFYNPRAS-PSEFVVP 284
                  + +                   +  A   AA    F V Y PRA   S+FVV 
Sbjct: 251 FGGGGGDVKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFSFEVVYYPRAGWYSDFVVR 310

Query: 285 LAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM-GTITGISDLDPVRWKNSQWRNLQVG 343
                 A+ +   S GMR +M  ETE+S    +  GTI   S  D   W+ S WR LQV 
Sbjct: 311 TDVVDGAL-AVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPWRMLQVA 369

Query: 344 WDESTAGEKRNRVSIWEIEPVT 365
           WDE    +   RVS W++E V+
Sbjct: 370 WDEPEVLQNAKRVSPWQVEYVS 391


>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
          Length = 624

 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/404 (34%), Positives = 203/404 (50%), Gaps = 67/404 (16%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           E + ++  +W ACAG  V++PA  + V YFPQGH EQ  AS    +   + + P++    
Sbjct: 8   ELRPLDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQ--ASSPPVLSPLVFSKPSV---- 61

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEF------FC 133
           LC ++ V   AD +TDEV+A++ L+PV  S++   + R  +    +  + E       F 
Sbjct: 62  LCRVVAVWFLADQDTDEVFAKIRLEPVGRSWESGTMERRRVGDGDDDKEDEGEDKVMSFV 121

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           K LT+SD +  GGFSVPR  A+ IFPPL+F   PP Q L+  DL    W FRHIYRG P+
Sbjct: 122 KILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPR 181

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFI-RDEKQQLLLGIRRANRQPAN------LSSSVLS 246
           RHLLTTGWS FV+ K+L AGDSV+F+ R+   +L +G+RR  R   N       S+   +
Sbjct: 182 RHLLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGA 241

Query: 247 SDSMHIGILAAAAHAAANNS----------------PFTVFYNPRASPSEFVVPLAKYYK 290
             +  +G +   + +++                   PF V Y PR   S+FVV  A+  +
Sbjct: 242 VKAKEVGSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVK-AEVVE 300

Query: 291 AVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQ-------- 341
              S   + GMR +M  ETE+S  T  + GT++  + +D   W+ S WR LQ        
Sbjct: 301 EALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQTWSYLQDT 360

Query: 342 ---------------------VGWDESTAGEKRNRVSIWEIEPV 364
                                V WDE    +   RVS W++E V
Sbjct: 361 KMRSLIVTFFSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVELV 404


>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
          Length = 273

 Score =  210 bits (534), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 109/197 (55%), Positives = 129/197 (65%), Gaps = 38/197 (19%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           +G  GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQ                  
Sbjct: 12  QGHEGEKKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQ------------------ 53

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCK 134
                          AD ETDEVYAQMTLQP+ P   ++  L  +L + S +P T +FCK
Sbjct: 54  ---------------ADVETDEVYAQMTLQPLTPQEQKDTFLPVELGIPSKQP-TNYFCK 97

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHD  W FRHI+RG  + 
Sbjct: 98  TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RD 155

Query: 195 HLLTTGWSLF-VSGKRL 210
             L   W +  +SG+R+
Sbjct: 156 SYLEQSWPVITLSGRRV 172


>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
 gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
          Length = 793

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 100/216 (46%), Positives = 140/216 (64%), Gaps = 14/216 (6%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL--PSKL 80
           K ++ +LW ACAG +V LP  G+ ++YFPQGH+EQ A+S         P++P    P+  
Sbjct: 36  KHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASS---------PDFPRALGPAGT 86

Query: 81  L-CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           + C +L+V   AD ETDEV+A + L P    D +    +  +    KP +  F KTLT S
Sbjct: 87  VPCRVLSVKFLADKETDEVFASLRLHPESGSDEDNDRAAAPSPSPEKPAS--FAKTLTQS 144

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           D +  GGFSVPR  AE IFP LD+S+ PP Q ++A+D+H  +W FRHIYRG P+RHLLTT
Sbjct: 145 DANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 204

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 235
           GWS FV+ K+L AGD+++F+R    +L +G+RR+ R
Sbjct: 205 GWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMR 240



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/126 (42%), Positives = 71/126 (56%), Gaps = 7/126 (5%)

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRR 316
           AA  AA+   F V Y PRAS +EF V  A+  +A  S+    GMRF+M FETE+S     
Sbjct: 314 AATLAASGKAFEVVYYPRASTAEFCV-RAQTVRAALSHGWYAGMRFKMAFETEDSSRISW 372

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE-----PVTAPFFIC 371
           +MGTI+ +   DP+ W +S WR LQV WDE    +  +RVS W++E     P+  P F  
Sbjct: 373 FMGTISAVQAADPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLPMQLPPFSL 432

Query: 372 PPPFFR 377
           P   FR
Sbjct: 433 PRKRFR 438


>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
          Length = 479

 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 172/323 (53%), Gaps = 59/323 (18%)

Query: 22  KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
           K  +  +LW+ CAGPL  LP  G  V YFPQGH E +  S + ++D   P + +LPSKL 
Sbjct: 15  KTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIF-DLPSKLR 73

Query: 82  CILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDT 141
           C ++ +    D  TDEVYAQ++L P                                 DT
Sbjct: 74  CRVVAIDRKVDKNTDEVYAQISLMP---------------------------------DT 100

Query: 142 STHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG- 200
           +                   D S     Q L+A+DL+   W+F+H++RG P+RH+ T+G 
Sbjct: 101 T-------------------DMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGG 141

Query: 201 -WSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
            WS+F + KRL  GD  + +R E  +L  GIRRA  Q  ++ SSV+S++ M  G++A+  
Sbjct: 142 GWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHGVIASVV 201

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           +A      F V Y P  S S+FV+   K+  A+++N I +G RFRM FE ++   +RY G
Sbjct: 202 NAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDFSEKRYDG 258

Query: 320 TITGISDLDPVRWKNSQWRNLQV 342
           TI G++D+ P  WK+S+WR+L++
Sbjct: 259 TIIGVNDMSP-HWKDSEWRSLKI 280


>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
 gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
          Length = 525

 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/351 (36%), Positives = 183/351 (52%), Gaps = 25/351 (7%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           I+  +W ACA PL  +P  GT V YFP+GH+EQ  A +   +       P+     LC +
Sbjct: 24  IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPL-------PSAHRFFLCTI 76

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
             V L ADT T E YA ++L P+          +    ++   +  ++ K LT SD +  
Sbjct: 77  TAVDLSADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEFRYYAKQLTQSDANNG 136

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPR  A+ IFP L+    PP Q L   DL  + W FRHIYRG P+RHLLTTGWS F
Sbjct: 137 GGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKF 196

Query: 205 VSGKRLFAGDSVLFIR----DEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAH 260
           V+ K+L AGD+V+F+       +++LL+G+RRA R      S+  +   +    +  A  
Sbjct: 197 VNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARGRVQPQEVMEAVR 254

Query: 261 AAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM-MFETEESGTRRYM- 318
            AA  + F V Y PR    EFVVP  +  K + +     GM+ R  + E E++    ++ 
Sbjct: 255 LAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGL-TTPWRCGMQVRAQVMEAEDTRRLAWLN 313

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK-RNR-VSIWEIEPVTAP 367
           GT+T +            WR L+V WD S A    +NR V+ W+++PV  P
Sbjct: 314 GTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVDFP 357


>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
 gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
          Length = 524

 Score =  209 bits (532), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/383 (35%), Positives = 197/383 (51%), Gaps = 43/383 (11%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKL 80
           +++ ++ ++W  CAG  V +P   +HV YFP GH E +  S         PN PN  S L
Sbjct: 4   QQRRVDQKIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPS---------PN-PNTLSHL 53

Query: 81  -------LCILLNVTLHADTETDEVYAQMTLQPVPS---YDREAL-LRSDLALKSNKPQT 129
                  LC +  V L AD  TDEV+ ++ L PV +   ++  +L +R D   K +  + 
Sbjct: 54  DRSRPFILCTVSAVDLLADLCTDEVFVKLLLTPVTNKGVHEPHSLEVRED---KDDDKKV 110

Query: 130 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             + KTLT SD +  G FSVP   A+ IFPPLD + + P QEL   D+H  +W FRH+YR
Sbjct: 111 VSYSKTLTPSDANNGGAFSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYR 170

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           G P RHLLTT WS FV  KRL  GDS++F++D    + +G+RR   Q     ++ ++  S
Sbjct: 171 GTPLRHLLTTDWSEFVDKKRLVGGDSLIFMKDSDGNISVGVRR---QTKFGGAAKITEKS 227

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
                   A   A  N  F V Y P A     FVV  AK  +   +   SLG+R  +  +
Sbjct: 228 -----FTEAVELADKNLAFEVVYYPTAKGWCNFVVD-AKVVEDAMNISWSLGVRIELSSK 281

Query: 309 TEESGTR--RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
             +S  R  ++ GTI+ +S        N  WR L+V WDE    +   RVS WE+E ++ 
Sbjct: 282 NYDSSKRCSKFEGTISALSA------PNCPWRMLEVKWDEPKVSQVPERVSPWEVETIS- 334

Query: 367 PFFICPPPFFRSKHPRQADDDAS 389
             F   P F  +K  +++D D++
Sbjct: 335 DIFALHPQFHPTKKLKKSDPDSA 357


>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
 gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
          Length = 695

 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/369 (36%), Positives = 181/369 (49%), Gaps = 50/369 (13%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G    ++  LW ACAG +  +P  G  V YFPQGH+E    +    +D ++P  P +P  
Sbjct: 43  GRDVDVHPRLWQACAGSMRAVPPVGAAVYYFPQGHAEHAGGAA---VDLRVP--PFVP-- 95

Query: 80  LLCILLNVTLHADTETDEVYAQMTL------QPVPSYDREALLRSDLALKSNK------- 126
             C +  V L AD +TD+VYA++ L      +PV      AL+++D + +          
Sbjct: 96  --CRVAAVRLMADPDTDDVYARIRLVPLRAWEPVADVGDAALVKTDGSSRGGADGDGDGD 153

Query: 127 --------PQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLH 178
                   P+   F KTLT SD +  GGFSVPR  A  IFP LD+S  PP Q + ARD+H
Sbjct: 154 AGGGQQQQPRPLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFVSARDVH 213

Query: 179 DNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPA 238
              WTFRHIYR  P+R LL  G  L    KR+F                   R      A
Sbjct: 214 GVEWTFRHIYRSTPRRTLLNPGCRL-RRAKRVFCR-----------------RGGGGSNA 255

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS 298
            ++ +  S   +    +  AA  AA   PF V + PRAS  EFVV  A   +++ +    
Sbjct: 256 GVAVAGPSDGKVPAEDVVEAARLAAAGQPFEVVHYPRASAPEFVVRAAAVKESMQAPWCP 315

Query: 299 LGMRFRMMFETEE-SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVS 357
            G+RF+M FETE+ S    +MGTI G+   DP RW  S WR LQV WDE       NRV 
Sbjct: 316 -GLRFKMAFETEDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRNVNRVC 374

Query: 358 IWEIEPVTA 366
            W +E V++
Sbjct: 375 PWRVELVSS 383


>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
 gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
 gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 529

 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/356 (36%), Positives = 185/356 (51%), Gaps = 31/356 (8%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           I+  +W ACA PL  +P  GT V YFP+GH+EQ  A +   +       P+     LC +
Sbjct: 24  IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPL-------PSAHRFFLCTI 76

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP-----QTEFFCKTLTAS 139
             V L ADT T E YA ++L P+  +D  A   +     +        +  ++ K LT S
Sbjct: 77  TAVDLSADTTTGEPYATISLLPL-RHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQS 135

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           D +  GGFSVPR  A+ IFP L+    PP Q L   DL  + W FRHIYRG P+RHLLTT
Sbjct: 136 DANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTT 195

Query: 200 GWSLFVSGKRLFAGDSVLFIR----DEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           GWS FV+ K+L AGD+V+F+       +++LL+G+RRA R      S+  +   +    +
Sbjct: 196 GWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSGE--SACNARGRVQPQEV 253

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM-MFETEESGT 314
             A   AA  + F V Y PR    EFVVP  +  K + +     GM+ R  + E E++  
Sbjct: 254 MEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGL-TTPWRCGMQVRAQVMEAEDTRR 312

Query: 315 RRYM-GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK-RNR-VSIWEIEPVTAP 367
             ++ GT+T +            WR L+V WD S A    +NR V+ W+++PV  P
Sbjct: 313 LAWLNGTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVDFP 361


>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
          Length = 330

 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/343 (35%), Positives = 179/343 (52%), Gaps = 62/343 (18%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           +LW  CAGPL ++P  G  V YFPQGH E V AS +++++   PN  +LPSKL C ++ +
Sbjct: 4   QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPN-CDLPSKLQCRVIAI 62

Query: 88  TLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSN---KPQTEFFCKTLTASDTSTH 144
            L  +  +DE Y ++TL P  +  +   L+  +  ++    +P    F K LTASDTS  
Sbjct: 63  HLKVENNSDETYVEITLMPDTTVSKN--LQVVIPTENENQFRPIVNSFTKVLTASDTSAQ 120

Query: 145 GGFSVPRRAAEKIFPPLDFSM----QP-PAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           G FSVP + A +  PPL F      QP PAQEL+A DLH N W F+H YR          
Sbjct: 121 GEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYR---------- 170

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
                        GD ++F R                         + +SM  G++A+A 
Sbjct: 171 -------------GDVIVFAR------------------------YNIESMRHGVIASAK 193

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMG 319
           HA  N   F + Y PR+  S+++V   K+  AV +N+ ++G ++ M FE ++    RY G
Sbjct: 194 HAFDNQCMFIMVYKPRS--SQYIVSHEKFLDAV-NNKFNVGSKYTMRFEDDDLSETRYFG 250

Query: 320 TITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           TI GISD  P  WK S+WR+L+V WDE  +  +  +VS W+I+
Sbjct: 251 TIIGISDFSP-HWKCSEWRSLEVQWDEFASFPRPKKVSPWDIK 292


>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
          Length = 241

 Score =  200 bits (508), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 113/231 (48%), Positives = 148/231 (64%), Gaps = 22/231 (9%)

Query: 70  IPNYP-----NLPSKLLCILLNVTLHADTETDEVYAQMTLQP----VPSYDREALLRSDL 120
           IP YP     NL   + C +++V L ADT  DEVYAQ+ L P    +    R+  + +D 
Sbjct: 15  IPAYPPVVYNNLRPHVFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADT 74

Query: 121 -------ALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELM 173
                  A KS  P    FCKTLTASDTSTHGGFSVPRRAAE  FPPLD+  Q P+QEL+
Sbjct: 75  EEEDLEGAGKSTTPH--MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELV 132

Query: 174 ARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA 233
           A+DLH   W FRHIYRGQP+RHLLTTGWS FV+ K+L +GD+VLF+R    +L LG+RRA
Sbjct: 133 AKDLHGMGWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRA 192

Query: 234 NRQPANLSSSVLS--SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFV 282
            +  A   S+ L+  S  +++  +    +A ++ + F + YNPRAS S+F+
Sbjct: 193 AQ--AKTCSNYLAPYSQLLNVSGIVDVVNAISSRNAFNICYNPRASSSDFI 241


>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
          Length = 652

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 136/394 (34%), Positives = 188/394 (47%), Gaps = 65/394 (16%)

Query: 38  VNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDE 97
           V +P   + V YFPQGH E     +           P+  S + CI+ ++ L AD  TDE
Sbjct: 26  VQIPVLHSRVYYFPQGHVEHCCPLLS--------TLPSSTSPVPCIITSIQLLADPVTDE 77

Query: 98  VYAQMTLQPVP-------SYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVP 150
           V+A + LQP+        +Y R      D+   +NK  T  F K LT SD +  GGFSVP
Sbjct: 78  VFAHLILQPMTQQQFTPTNYSRFGRFDGDVD-DNNKVTT--FAKILTPSDANNGGGFSVP 134

Query: 151 RRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 210
           R  A+ +FP L+F + PP Q+L   D+H  +W FRHIYRG P+RHLLTTGWS FV+ K+L
Sbjct: 135 RFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKL 194

Query: 211 FAGDSVLFIRDEKQQLLLGIRRA---------------NRQPANLSSSVLSSD------- 248
            AGDSV+F+R    ++ +G+RR                        SSV   D       
Sbjct: 195 IAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKT 254

Query: 249 ---SMHIGILAAAAHAAANNS----PFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGM 301
              S +  + A A   A N +    PF V + P A  SEFVV  A+  ++  S   + G 
Sbjct: 255 FRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVV-RAEDVESSMSMYWTPGT 313

Query: 302 RFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQV-------GWDESTAGEKRN 354
           R +M  ETE+S    +   I   +  +   W+ S W+ LQV        WDE    +   
Sbjct: 314 RVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITWDEPEILQNVK 373

Query: 355 RVSIWEIEPVT------APFFICPPPFFRSKHPR 382
           RV+ W++E          PF    PP  R K+P+
Sbjct: 374 RVNPWQVEIAAHATQLHTPF----PPAKRLKYPQ 403


>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
           vinifera]
          Length = 247

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 103/226 (45%), Positives = 134/226 (59%), Gaps = 41/226 (18%)

Query: 19  GGEKKTINT----ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
           G +  T+N     ELWHAC  PLVN+P     V YFPQGH E + ASM +++D ++P++ 
Sbjct: 26  GSKLGTVNIALYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASMHQELDQKMPSF- 84

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
           NLPSK+LC  +N                 + P                         FCK
Sbjct: 85  NLPSKILCKXVNFI-----------HNCIVHP-------------------------FCK 108

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLTASDTSTHGGFSV RR  ++  PPLD S  PP QEL+A+D+H N   FRHI++GQP+ 
Sbjct: 109 TLTASDTSTHGGFSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPFRHIFQGQPRC 168

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
           HLLTTGWS+FVS KRL  GD+++F+R E  +L +G+RR  RQ  N+
Sbjct: 169 HLLTTGWSVFVSTKRLAVGDALIFLRKENGELCVGVRRLTRQLNNV 214


>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 551

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 137/362 (37%), Positives = 192/362 (53%), Gaps = 31/362 (8%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ ++W ACAG  V +P   + V YFPQGH E   AS    +   I + P +P    C +
Sbjct: 9   VDPKIWRACAGAAVQIPKLHSRVYYFPQGHMEH--ASPSHYLSPLIRSLPFVP----CHV 62

Query: 85  LNVTLHADTETDEVYAQMTL--------QPVPSYDREALLRSDLALKSNKPQTEFFCKTL 136
            ++   AD  +DEV+A+  L        QP  +  +EA    D   + N     F  K L
Sbjct: 63  SSLDFLADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSF-AKIL 121

Query: 137 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           T SD +  GGFSVPR  A+  FPPLDF   PP Q L   D+H   W FRHIYRG P+RHL
Sbjct: 122 TPSDANNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHL 181

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS---------SVLSS 247
            TTGWS FV+ K+L AGD+V+F++D    + +GIRRA R  A + +         S  ++
Sbjct: 182 FTTGWSKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRSTT 241

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
             +    +AAAA +AA N+PF V Y PR   ++FVV      +++    +  GMR ++  
Sbjct: 242 GRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVG-GMRVKISM 300

Query: 308 ETEESGTRR-YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           ETE+S     Y GT++     +     N  WR LQV WDE    +   +VS W++E V+ 
Sbjct: 301 ETEDSSRMTWYQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKQVSPWQVELVSP 355

Query: 367 PF 368
           PF
Sbjct: 356 PF 357


>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
 gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
          Length = 460

 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 129/357 (36%), Positives = 186/357 (52%), Gaps = 34/357 (9%)

Query: 21  EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNY-PNLPSK 79
           E K ++ E+W   AGP   +P   + V YFP GH E    S   +    I +Y P +P  
Sbjct: 5   EPKRVDREIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLINSYRPIIP-- 62

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYD----REALLRSDLALKSNKPQTEFFCKT 135
             C++ +V L AD +TDEV+A++ L P+ +      +E  +R +   +    +  F  KT
Sbjct: 63  --CVVSDVDLLADLQTDEVFAKLILTPITNDSVHEPQEPEVREN---EHGGDRLVFSGKT 117

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD +  G FSVP   A+ IFPPLD +   P+Q L  +D+H+ +W FRH YRG PKRH
Sbjct: 118 LTQSDANNGGAFSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRH 177

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFI----RDEKQQLLLGIRRANRQPANLSSSVLSSDSMH 251
           L+TT WS FV  K++  GDS++ +      +K ++ +GIRR     A   + +     M 
Sbjct: 178 LITTKWSKFVDTKKIIGGDSLVLMKISKDKDKDKIFIGIRRHKLSAA---AKITEKSVME 234

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFETE 310
                 AA  A  N  F V Y P AS    FVV      KA+  N  S GMR +   +T+
Sbjct: 235 ------AAELADKNMTFEVIYYPTASHWCNFVVDAEAVKKAMQINWQS-GMRVKHCLKTD 287

Query: 311 ESGTRR--YMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           ES  R   + GT++ +SD       +  WR LQV WDES   +  ++VS W+IE ++
Sbjct: 288 ESSKRSSIFQGTVSALSDP-----SHHPWRMLQVNWDESEVSQNPSQVSPWQIELIS 339


>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
 gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
          Length = 698

 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 8/212 (3%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ +LWHACAG +V +P   + V YFPQGH+E        D+         +P+ +LC +
Sbjct: 21  VDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-----RVPALVLCRV 75

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
             V   AD +TDEV A++ L PV   + +    +    + +KP +  F KTLT SD +  
Sbjct: 76  DAVRFLADPDTDEVLARVRLAPVRPNEPDHADAAAPGAREDKPAS--FAKTLTQSDANNG 133

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGFSVPR  AE IFP LD+S  PP Q ++A+D+H  +W FRHIYRG P+RHLLTTGWS F
Sbjct: 134 GGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAF 193

Query: 205 VSGKRLFAGDSVLFIR-DEKQQLLLGIRRANR 235
           V+ KRL AGDS++F+R      L +GIRRA +
Sbjct: 194 VNQKRLVAGDSIVFMRTGGTGDLCVGIRRAKK 225



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 291 AVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
           A H  Q   GMRF+M FETE+S     +MGT+  +   DP+RW NS WR LQV WDE   
Sbjct: 310 AHHVTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDL 369

Query: 350 GEKRNRVSIWEIEPVTA 366
            +   RVS W +E V++
Sbjct: 370 LQNVKRVSPWLVELVSS 386


>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
          Length = 188

 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 98/173 (56%), Positives = 120/173 (69%), Gaps = 4/173 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G     +  ELWHACAGPLVN+P     V YFPQGH EQ+ ASM + +D ++P++ NLPS
Sbjct: 13  GTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF-NLPS 71

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQT-EFFCKTLT 137
           K+LC ++NV L A+ ETDEVYAQ+TL P P  D+  +   D  L   +  T   FCKTLT
Sbjct: 72  KILCKVVNVHLRAEPETDEVYAQVTLLPEP--DQSEITSPDPPLPEPQSCTVHSFCKTLT 129

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
           ASDTSTHGGFSV RR A++  PPLD S  PP QEL+A+DLH N W FRHI+RG
Sbjct: 130 ASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182


>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
          Length = 540

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 184/361 (50%), Gaps = 53/361 (14%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +N +L   CAGPL + P  G           E++  S+  ++  Q+    ++PSK+ C +
Sbjct: 23  LNGQLLKLCAGPLFDTPKVG-----------EKLVTSINDEL-CQLKPIFDIPSKICCNV 70

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
            ++ L  +  T+++YA++ L P  S D E  +  +   ++N     +F K L+ASDT   
Sbjct: 71  FSINLKVENNTNDIYAEVALLPDTS-DVEIPIPKN---ENNIQNINYFTKVLSASDTCKT 126

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
           GGF + +R A +  P LD S   P+QE++A+D+H + W+F+H  RG              
Sbjct: 127 GGFVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHTLRG-------------- 172

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
                            E  +  +GI RA  Q  N+ +S +S  SMH G++A A +   N
Sbjct: 173 -----------------ENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATALNTIKN 215

Query: 265 NSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGI 324
              F VFY PR+  S+F+V   K+   V +N+ S+G +F M FE ++    RY GTI G+
Sbjct: 216 KCMFVVFYKPRS--SQFLVNFDKFVDRV-NNKFSIGSKFSMKFEGKDLNETRYNGTIVGV 272

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQA 384
            D     WK+S+WR+L+V WD +    + ++VS WEIE +T    I    + ++K  RQ 
Sbjct: 273 GDF-STHWKDSEWRSLKVQWDGTATIPRPDKVSPWEIEMLTQSSNISKSDYLKNK--RQI 329

Query: 385 D 385
           D
Sbjct: 330 D 330


>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
 gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
          Length = 622

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/372 (33%), Positives = 174/372 (46%), Gaps = 76/372 (20%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + ++ +LW ACAG +  +P  G    YFPQGH+EQ  A++   +         +P  + C
Sbjct: 30  RDVHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAAVDLRV---------VPPFVAC 80

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYD-----REALLRSDLALKSNKPQTEF------ 131
            +  V L A+ +TD++YA++ L P+  ++      +ALL           Q         
Sbjct: 81  RVAAVRLMAEPDTDDIYAKIRLVPLRPWEPVTDVGDALLGEGSRGGDGDGQQRRRRRPRP 140

Query: 132 --FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
             F KTLT SD                                         WTFRH+YR
Sbjct: 141 LSFAKTLTQSD-----------------------------------------WTFRHVYR 159

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----QPANLSSSVL 245
           G P RHL+T GWS FV  K+L  GDSV+F+R+E  ++ +G+RRA R      A  S + +
Sbjct: 160 GNPPRHLITAGWSNFVHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAV 219

Query: 246 SSDS---MHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMR 302
           +  S   +    +  AA  AA   PF V + PRAS  EF V  A   K    +    G+R
Sbjct: 220 AGPSDGKVPAEDVVEAARLAAAGQPFEVVHYPRASAPEFCV-RADAVKESMRSPWCPGLR 278

Query: 303 FRMMFETEE-SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEI 361
           F+M FETE+ S    +MGTI G+   DP RW  S WR LQV WDE    +   RV  W +
Sbjct: 279 FKMAFETEDLSRISWFMGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRV 338

Query: 362 EPVTA----PFF 369
           E V++    P+F
Sbjct: 339 ELVSSMPNLPWF 350


>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
 gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
 gi|224031343|gb|ACN34747.1| unknown [Zea mays]
 gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
 gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
          Length = 462

 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 173/379 (45%), Gaps = 50/379 (13%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G     ++ ++W ACA PL  LP  G  V YFP GH+EQ  A +   +          P 
Sbjct: 12  GHGNSIVDRDVWLACAAPLSRLPTVGDDVYYFPDGHAEQCPAHLPAPLPA--------PH 63

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTE---FFCKT 135
              C + +++L AD +TDEV+A+++L+P       A  R D    SN P  E   +  K 
Sbjct: 64  FFPCTVTDISLGADDKTDEVFAKISLRP----GLAAASRPDPG-SSNSPPREPLSYSIKE 118

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           L+ SD +  G F VPR   + ++P +DF   PP Q L+  D     W FRH+YR +  RH
Sbjct: 119 LSQSDANGGGSFCVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRH 178

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGI- 254
           +LTTGWS FV+ K L AGD ++F+R     L++G+RR  R    L       D+      
Sbjct: 179 VLTTGWSKFVNAKLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQP 238

Query: 255 ----------------LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS 298
                           +  AA  AA   PFTV Y PR +  EFVVP  +  + V      
Sbjct: 239 PPPPPRNALARVPPKDVMEAARLAAEGRPFTVTYYPRKAAGEFVVPRNE-VEGVLDTLWE 297

Query: 299 LGMRFRMMFETEESGTRRYM---GTITGISDLDPVRWKNSQWRNLQVGWD---ESTAGEK 352
            G    M F  E   TRR M   G +  I            WR L++ WD    + + + 
Sbjct: 298 PGSHVLMQF-AEAEDTRRTMWADGHVKAI--------HQKIWRALEIDWDVASSAISAQL 348

Query: 353 RNRVSIWEIEPVTAPFFIC 371
              V+ W+++ +  P  IC
Sbjct: 349 GRFVNAWQVQRIAYP-SIC 366


>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
          Length = 546

 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/217 (46%), Positives = 125/217 (57%), Gaps = 3/217 (1%)

Query: 161 LDFSMQPPAQE-LMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI 219
           + F   P   E ++A+D+H  IW FRHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+
Sbjct: 64  VKFMADPETDETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL 123

Query: 220 RDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPS 279
           R E   L +GIRRA R  A     +     +    +  AA  AAN  PF V Y PRAS  
Sbjct: 124 RAENGDLCVGIRRAKRGIAGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTP 183

Query: 280 EFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWR 338
           EF V  +    AV     S GMRF+M FETE+S     +MGTI+ +   DP+RW NS WR
Sbjct: 184 EFCVKASGVRSAVRIQWCS-GMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWR 242

Query: 339 NLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF 375
            LQV WDE    +   RVS W +E V+    I   PF
Sbjct: 243 LLQVTWDEPDLLQNVKRVSPWLVELVSNMPIIHLSPF 279



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 6/76 (7%)

Query: 22 KKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL 81
          +K+++++LWHACAG +V +P   + V YFPQGH+E    ++           P +P+ +L
Sbjct: 5  EKSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNV------DFAAAPRIPALVL 58

Query: 82 CILLNVTLHADTETDE 97
          C +  V   AD ETDE
Sbjct: 59 CRVAAVKFMADPETDE 74


>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
          Length = 545

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/363 (35%), Positives = 190/363 (52%), Gaps = 35/363 (9%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + ++ ++W ACAG  V +P   + V YFPQGH E   AS    ++  + + P +P    C
Sbjct: 7   RRVDPKIWRACAGAAVQIPKLHSRVYYFPQGHLEH--ASPSHYLNPLLRSLPFVP----C 60

Query: 83  ILLNVTLHADTETDEVYAQMTL-----QPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            + ++   AD  +DEV+A+  L     QP P+   EA    +   K  +     F K LT
Sbjct: 61  HVSSLDFLADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEE---KDRENGVVSFSKILT 117

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
            SD +  GGFSVPR  A+  FPPLDF    P+  +        +   RHIYRG P+RHL 
Sbjct: 118 PSDANNGGGFSVPRYCADSWFPPLDFXXXXPSSPVATSRRRVAL---RHIYRGTPRRHLF 174

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSS-----------SVLS 246
           TTGWS FV+ K+L AGD+V+F++D   ++ +GIRRA R  A + +           S  +
Sbjct: 175 TTGWSKFVNHKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSA 234

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           +  +    +AAAA +AA N+PF V Y PR   ++FVV      +++    +  GMR ++ 
Sbjct: 235 TGRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVG-GMRVKIA 293

Query: 307 FETEESGTRRYM-GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
            ETE+S    +  GT++     +     N  WR LQV WDE    +   RVS W++E V+
Sbjct: 294 METEDSSRMTWFQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKRVSPWQVELVS 348

Query: 366 APF 368
            PF
Sbjct: 349 LPF 351


>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  172 bits (436), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 80/129 (62%), Positives = 100/129 (77%)

Query: 63  KKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL 122
           KK  + +IPNYP+LPS+LLC + N+T+HAD +TDEVYAQM LQPV S      ++S  + 
Sbjct: 40  KKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETNVFPIQSLGSY 99

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
             +K   E+FCK LTASD STHGGFS+PRRAA K+FP LD+SMQPP QEL+ +DLHDN+W
Sbjct: 100 AKSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDNMW 159

Query: 183 TFRHIYRGQ 191
            FRHIYRG+
Sbjct: 160 IFRHIYRGR 168


>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/138 (63%), Positives = 106/138 (76%), Gaps = 2/138 (1%)

Query: 64  KDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV-PSYDREALLRSDLAL 122
           K ++ + P +P+L   LL      +   + ETDEVYAQMTLQP+ P   ++A L ++L +
Sbjct: 66  KTLNSRRPPFPSLLPSLLFSFSLHSSFFNFETDEVYAQMTLQPLSPQEQKDAYLPAELGV 125

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
            S +P + +FCKTL ASDTSTHGGFSVPRRAAEK+FPPLDFS QPPAQEL+ARDLHDN W
Sbjct: 126 PSKQP-SNYFCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEW 184

Query: 183 TFRHIYRGQPKRHLLTTG 200
            FRHI+RGQPKRHLLTTG
Sbjct: 185 KFRHIFRGQPKRHLLTTG 202


>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 176

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 80/129 (62%), Positives = 100/129 (77%)

Query: 63  KKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLAL 122
           KK  + +IPNYP+LPS+LLC + N+T+HAD +TDEVYAQM LQPV S      ++S  + 
Sbjct: 40  KKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQPVNSETDVFPIQSLGSY 99

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
             +K   E+FCK LTASD STHGGFS+PRRAA K+FP LD+SMQPP QEL+ +DLHDN+W
Sbjct: 100 AKSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDNMW 159

Query: 183 TFRHIYRGQ 191
            FRHIYRG+
Sbjct: 160 IFRHIYRGR 168


>gi|380293250|gb|AFD50273.1| auxin response factor 2, partial [Micromeria varia]
          Length = 189

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/203 (55%), Positives = 141/203 (69%), Gaps = 17/203 (8%)

Query: 728 AAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNPSAL 787
           AA  GQS +TDD PSCSTSPSTNNC   +Q  +N + H       E+AQS+   LN S L
Sbjct: 1   AANGGQSAVTDDVPSCSTSPSTNNCSNGVQ-LMNGKNH-------EIAQSSVTQLNSSGL 52

Query: 788 ETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVC 847
           ET+PS+  LVK+L  K+DVKPS+N+SK+QNQGFFT Q YLN   T  DYLD+SSS TSV 
Sbjct: 53  ETIPSS--LVKELQQKNDVKPSLNVSKSQNQGFFTSQAYLNPTGTHIDYLDSSSSATSV- 109

Query: 848 LSQNDVHLQQNNSLSYNPQST-LRDASQDGEVPVDPRSNIPYGANIDGPLG-SMNPDPLL 905
           LSQND+ +  NN   ++ QS   RDAS DGEV  DPRSN+P+GA+I+  L   M P+ L+
Sbjct: 110 LSQNDLQIPPNN---FHSQSLFFRDASHDGEVQGDPRSNLPFGAHIENQLEIPMMPETLI 166

Query: 906 TKGMMGLGKDFSNNI-SSGAMLA 927
           TK M+G GKDF+ ++ S G ML+
Sbjct: 167 TKNMVGSGKDFATDVPSEGGMLS 189


>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
 gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
          Length = 216

 Score =  171 bits (432), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/223 (42%), Positives = 129/223 (57%), Gaps = 23/223 (10%)

Query: 29  LWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL------C 82
           +W ACAG  V +P   + V YFPQGH EQ ++S         P+ P L +  L      C
Sbjct: 1   IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTA-------PHPPFLSNLALSKPLISC 53

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALL------RSDLA----LKSNKPQTEFF 132
            +  V   AD  TDEV+ ++ L P+ ++     L      RS+      +  ++ +   F
Sbjct: 54  QISAVDFLADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVNDVDDDENKILAF 113

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP 192
            K LT SD +  GGFSVPR  A+ IFPPL++  +PP Q L   D+H   W FRHIYRG P
Sbjct: 114 AKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTP 173

Query: 193 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 235
           +RHLLTTGWS FV+ K+L AGDSV+F+R+ K ++ +G+RRA R
Sbjct: 174 RRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216


>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
          Length = 139

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 81/128 (63%), Positives = 100/128 (78%), Gaps = 3/128 (2%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           E   GEKK +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQVAAS  K++D  IPNYP 
Sbjct: 13  EEATGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPG 72

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDRE--ALLRSDLALKSNKPQTEFFC 133
           LP +L+C L N+T+HAD ETDEVYAQMTLQP+   +++   LL ++L + S +P T +FC
Sbjct: 73  LPPQLICQLHNLTMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAELGIPSKQP-TNYFC 131

Query: 134 KTLTASDT 141
           KTLTASDT
Sbjct: 132 KTLTASDT 139


>gi|380293248|gb|AFD50272.1| auxin response factor 2, partial [Micromeria hyssopifolia]
          Length = 192

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/205 (54%), Positives = 143/205 (69%), Gaps = 17/205 (8%)

Query: 728 AAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNPSAL 787
           AA  GQS +TDD PSCSTSPSTNNC   +Q  +N + +       E+AQS+   LN S L
Sbjct: 1   AANGGQSAVTDDVPSCSTSPSTNNCSNGVQ-LMNGKNN-------EIAQSSVTQLNSSGL 52

Query: 788 ETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVC 847
           ET+PS+  LV++L  K+DVKPS+N+SK+QNQGFFT Q YLN   T  DYLD+SSS TSV 
Sbjct: 53  ETIPSS--LVRELQQKNDVKPSLNVSKSQNQGFFTSQAYLNPTGTHIDYLDSSSSATSV- 109

Query: 848 LSQNDVHLQQNNSLSYNPQST-LRDASQDGEVPVDPRSNIPYGANIDGPLG-SMNPDPLL 905
           LSQND+H+  NN   ++ QS   RDAS DGEV  DPRSN+P+GA+I+  L   M P+ L+
Sbjct: 110 LSQNDLHIPPNN---FHSQSLFFRDASHDGEVQGDPRSNLPFGAHIENQLEIPMMPETLI 166

Query: 906 TKGMMGLGKDFSNNI-SSGAMLANY 929
           TK M+G GKDF+ ++ S G ML+ +
Sbjct: 167 TKNMVGSGKDFATDVPSGGGMLSPF 191


>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
 gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
          Length = 215

 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/222 (42%), Positives = 127/222 (57%), Gaps = 23/222 (10%)

Query: 30  WHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL------CI 83
           W ACAG  V +PA  + V YFPQGH EQ ++S         P+ P L +  L      C 
Sbjct: 1   WRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTA-------PHPPFLTNLALSKPSIPCQ 53

Query: 84  LLNVTLHADTETDEVYAQMTLQPVP--------SYDREALLRSDLA--LKSNKPQTEFFC 133
           +  V   AD  TDEV+ ++ L P+         S+        + A  +  ++ +   F 
Sbjct: 54  ISAVDFLADPVTDEVFTRLLLIPLDNPFSNLPLSFLEPCRSEGEGANDVDDDERKILAFS 113

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           K LT SD +  GGFSVPR  A+ IFPPL++  +PP Q L   D+H   W FRHIYRG P+
Sbjct: 114 KILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPR 173

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 235
           RHLLTTGWS FV+ K+L AGDSV+F+R+ K ++ +G+RRA R
Sbjct: 174 RHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215


>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
          Length = 187

 Score =  170 bits (430), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 81/111 (72%), Positives = 94/111 (84%), Gaps = 2/111 (1%)

Query: 94  ETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRR 152
           ETDEVYAQMTLQP+ P   ++A L ++L + S +P + +FCKTL ASDTSTHGGFSVPRR
Sbjct: 69  ETDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQP-SNYFCKTLIASDTSTHGGFSVPRR 127

Query: 153 AAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           AAEK+FP LDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLTTG+ L
Sbjct: 128 AAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGYLL 178


>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
          Length = 207

 Score =  169 bits (429), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 88/204 (43%), Positives = 124/204 (60%), Gaps = 12/204 (5%)

Query: 37  LVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETD 96
           +V +P   + V YFPQGH+E     +          Y  +PS + C + ++   A+ ETD
Sbjct: 1   MVQMPEVNSQVFYFPQGHAEHACEPV------NFSAYSKIPSFIPCRVEDIRYMANHETD 54

Query: 97  EVYAQMTLQPVP----SYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRR 152
           EVYA++ L P+     S+D + +   +++   +K Q+  F KTLT SD +  GGFS PR 
Sbjct: 55  EVYAKLRLVPMNINQVSFDNDGVAGINVSETKDKHQS--FAKTLTQSDANNGGGFSCPRY 112

Query: 153 AAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFA 212
            AE IFP +D+S  PP Q +  +D+H   W FRH+YRG PKRHLLTTGWS FVS K+L +
Sbjct: 113 CAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLAS 172

Query: 213 GDSVLFIRDEKQQLLLGIRRANRQ 236
           GDSV+F+R E  +L +GI R  R+
Sbjct: 173 GDSVVFLRSENGELRVGIWREKRR 196


>gi|380293252|gb|AFD50274.1| auxin response factor 2, partial [Micromeria varia]
          Length = 189

 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/203 (54%), Positives = 141/203 (69%), Gaps = 17/203 (8%)

Query: 728 AAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASALLNPSAL 787
           AA  GQS +TDD PSCSTSPSTNNC   +Q  +N + H       E+AQS+   LN S L
Sbjct: 1   AANGGQSAVTDDVPSCSTSPSTNNCSNGVQ-LMNGKNH-------EIAQSSVTQLNSSGL 52

Query: 788 ETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTTSVC 847
           ET+PS+  LVK+L  K+DVKPS+N+SK+QNQGFFT Q YLN   T  DYLD+SSS TSV 
Sbjct: 53  ETIPSS--LVKELQQKNDVKPSLNVSKSQNQGFFTSQAYLNPTGTHIDYLDSSSSATSV- 109

Query: 848 LSQNDVHLQQNNSLSYNPQST-LRDASQDGEVPVDPRSNIPYGANIDGPLG-SMNPDPLL 905
           LSQND+ +  NN   ++ QS   RDAS DGEV  DPRSN+P+GA+I+  L   + P+ L+
Sbjct: 110 LSQNDLQIPPNN---FHSQSLFFRDASHDGEVQGDPRSNLPFGAHIENQLEIPIMPETLI 166

Query: 906 TKGMMGLGKDFSNNI-SSGAMLA 927
           TK M+G GKDF+ ++ S G ML+
Sbjct: 167 TKNMVGSGKDFATDVPSGGGMLS 189


>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
 gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
 gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
          Length = 222

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/212 (42%), Positives = 123/212 (58%), Gaps = 8/212 (3%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           G K  +  +LW  CAGPL ++P  G  V YFPQGH E V AS +++++   PN  +LPSK
Sbjct: 19  GSKSYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNC-DLPSK 77

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTAS 139
           L C ++ + L  +  +DE Y ++TL P    D   ++         +P    F K LTAS
Sbjct: 78  LQCRVIAIHLKVENNSDETYVEITLMP----DTTQVVIPTENENQFRPIVNSFTKVLTAS 133

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           DTS  G FSVP + A +  PPLD S   PAQEL+A DLH N W F+H YR  P+    TT
Sbjct: 134 DTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TT 190

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIR 231
           GW+ F + K+L  GD ++F R E  +L +GIR
Sbjct: 191 GWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222


>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
          Length = 496

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 106/136 (77%), Gaps = 2/136 (1%)

Query: 210 LFAGDSVLFIRD--EKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           LF    +L +R+  EK QLLLGIR A+R    + S VLSSDSMHI +LAA AHAAA NS 
Sbjct: 9   LFLYHYILMLRNRNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSR 68

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FT+F+NPRASP+EFV+PL+KY KA+   +IS+GMRFRM+FETEES  RRYMGTIT +SD 
Sbjct: 69  FTIFFNPRASPTEFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDA 128

Query: 328 DPVRWKNSQWRNLQVG 343
           DPVRW +S WR+++V 
Sbjct: 129 DPVRWPSSYWRSVKVA 144



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/134 (63%), Positives = 105/134 (78%), Gaps = 2/134 (1%)

Query: 210 LFAGDSVLFIRD--EKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSP 267
           LF    +L +R+  EK QLLLGIR A+R    + S VLSSDSMHI +LAA AHAAA NS 
Sbjct: 213 LFLYHYILMLRNRNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSR 272

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FT+F+NPRASP+EFV+PL+KY KA+   +IS+GMRFRM+FETEES  RRYMGTIT +SD 
Sbjct: 273 FTIFFNPRASPTEFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDA 332

Query: 328 DPVRWKNSQWRNLQ 341
           DPVRW +S WR+++
Sbjct: 333 DPVRWPSSYWRSVK 346


>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
 gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
          Length = 456

 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 180/360 (50%), Gaps = 17/360 (4%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           +  E+WH CA   V +P   + V YFPQGH E  A+     I        +     LCI+
Sbjct: 10  VRPEIWHTCATAAVKIPKLHSRVYYFPQGHLEN-ASPSSSSITHTHSFLQSFRPFTLCIV 68

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
             V L AD  TDEV+ ++ L P+ +       + ++A  +++ +   F KTLT SD +  
Sbjct: 69  SAVDLLADPHTDEVFVKLLLTPITNDVHLENPKEEVANLNDRNEVVSFVKTLTRSDVNNA 128

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL-TTGWSL 203
             F +PR  A+ +FP LD   +  +Q L   D+H  +  F H+ RG PKR++L  + W+ 
Sbjct: 129 RSFHIPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYISEWNS 188

Query: 204 FVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAA 263
           FV  K+L AGDSV+F++D   ++ +GIRR  +  A  +++    D +   ++ A    A 
Sbjct: 189 FVKRKKLVAGDSVIFMKDSTGKIFVGIRRNTQFVA--AAAEQKKDELEKAVMEALK-LAE 245

Query: 264 NNSPFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTIT 322
            N  F + Y P+     +FVV      +++   +I    R R+  +T++S    Y GTI+
Sbjct: 246 ENKAFEIVYYPQGDDWCDFVVDGNVVDESM---KIQWNPRMRVKMKTDKSSRIPYQGTIS 302

Query: 323 GISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
            +S        ++ WR LQV WDE    +   RV+ W +E ++      P PF ++K  R
Sbjct: 303 IVSR------TSNLWRMLQVNWDEFQVSQIPRRVNPWWVELISHK--PAPTPFPQTKKFR 354


>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
          Length = 630

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 95/233 (40%), Positives = 122/233 (52%), Gaps = 40/233 (17%)

Query: 172 LMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIR 231
           ++A+D+H  +W FRHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIR
Sbjct: 98  VLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIR 157

Query: 232 RANRQ----PANLS------------------SSVLSSDSMHIGILAAA----------- 258
           RA +     P  L                   S  L  D     + AAA           
Sbjct: 158 RAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPE 217

Query: 259 -----AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
                A+ A +  PF V Y PRAS  EF V  A   +A    Q   GMRF+M FETE+S 
Sbjct: 218 EVVEAANLAVSGQPFEVVYYPRASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSS 276

Query: 314 -TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
               +MGT++ +   DP+RW NS WR LQV WDE    +   RVS W +E V+
Sbjct: 277 RISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVS 329



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 5/84 (5%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K ++ +LWHACAG +V +P   + V YFPQGH+E        +  G       +P+ +LC
Sbjct: 18  KCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFPGG-----RVPALVLC 72

Query: 83  ILLNVTLHADTETDEVYAQMTLQP 106
            +  V   AD +TDEV+A++ L P
Sbjct: 73  RVAGVRFMADPDTDEVFAKIRLVP 96


>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
 gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
          Length = 410

 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 161/336 (47%), Gaps = 48/336 (14%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLL--- 81
           ++ ++W  CAG  V +P   +HV YFP GH E V+ S         PN   L   LL   
Sbjct: 9   VDPKIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPS---------PNPSTL--SLLDRS 57

Query: 82  -----CILLNVTLHADTETDEVYAQMTLQPVPS---YDREALLRSDLALKSNKPQTEFFC 133
                C +  V L AD  TDEV+ ++ L P  +   ++    +R D   + +  +     
Sbjct: 58  RQFIPCTVSTVNLLADPVTDEVFVKLLLTPGTNNCVHEPPPEVRED---QHDGVKVVSSG 114

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTLT SD +  G FSVP   A+ IFPPLD   + P+Q+L   D+H   W  RH+YRG P 
Sbjct: 115 KTLTPSDANNGGAFSVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPL 174

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFI----RDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           RHL+TT WS FV  K+L  GDS++F+    R   + + +GI   +RQ    ++ +     
Sbjct: 175 RHLITTNWSEFVDEKKLIGGDSLVFMKKSTRTGTETISVGI---HRQKFGAATKIAEKS- 230

Query: 250 MHIGILAAAAHAAANNSPFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
                +  A   A  N  F V Y P A    +FVV  AK  +    N+ + G+R +   +
Sbjct: 231 -----VTEAVELAEKNMAFDVVYYPTAEGWCDFVVN-AKVVEDAMKNKWNSGLRIKHSLK 284

Query: 309 TEESGTR--RYMGTITGISDLDPVRWKNSQWRNLQV 342
            + S  R   + GTI+ +S        N  WR L+V
Sbjct: 285 KDNSSKRCSNFEGTISALSA------PNRPWRMLEV 314


>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
 gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
          Length = 523

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 178/370 (48%), Gaps = 36/370 (9%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           + +++++W   AGP V +P  G+ V YF +GH E   +S   +I+ ++      PS +LC
Sbjct: 7   RRVDSKIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSS--PNIETELLLCLRPPS-VLC 63

Query: 83  ILLNVTLHADTETDEVYAQMTLQPV-------------PSY-DREALLRSDLALKSNKP- 127
           I+ +V L A+  TDEV+A++ L PV             P + D+E    ++L ++  +P 
Sbjct: 64  IISSVDLLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPA 123

Query: 128 -------------QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMA 174
                            + K LT SDT    G  VPR   E IFP LD      +++L  
Sbjct: 124 PPEVPDEEDDDSNNLVSYVKILTQSDT--QSGLFVPRECMELIFPNLDLEDPMQSEKLSV 181

Query: 175 RDLHDNIWTFRHIYRGQP-KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRA 233
            D+ D +WT+++ Y  +    +  TTGWS FV  K+L A DSV+FI++   ++ +GI R 
Sbjct: 182 TDIQDVVWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGICRK 241

Query: 234 NRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVH 293
              PA        S+++    +  A   A  N  F V Y P A+  +FVV  +   +A+ 
Sbjct: 242 AMYPATEEEGG-KSENLTEKAVKDAVELAGKNMAFQVVYYPTANWCDFVVDASVVDEAMK 300

Query: 294 SN-QISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK 352
           +  +  +G++ R+      +  + Y      IS++  V      WR LQV WD     + 
Sbjct: 301 NGWEFGMGIKLRLNEFASSNSKKTYYQPKGTISNMSNVPSNVPSWRMLQVNWDGPDISQN 360

Query: 353 RNRVSIWEIE 362
            NRV+ W+++
Sbjct: 361 PNRVNPWQVD 370


>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 614

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 77/153 (50%), Positives = 104/153 (67%), Gaps = 3/153 (1%)

Query: 230 IRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYY 289
            RRA RQ +N+ SSV+SS SMH+G+LA A HA    S FTV+Y PR SPSEF++P  +Y 
Sbjct: 37  FRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYM 96

Query: 290 KAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
           ++V +N  S+GMRFRM FE EE+  +R+ GTI G  +LD + W  S WR+L+V WDE + 
Sbjct: 97  ESVKNN-YSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQL-WPESNWRSLKVRWDEPST 154

Query: 350 GEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPR 382
             + +RVS W+IEP ++P  + P P  R K PR
Sbjct: 155 IPRPDRVSPWKIEPASSP-PVNPLPLSRVKRPR 186


>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 119

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 84/103 (81%), Gaps = 2/103 (1%)

Query: 102 MTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPP 160
           MTLQP+ P   ++A L ++L + S +P + +FCKTL ASDTSTHGGFSVPRRAAEK+FP 
Sbjct: 1   MTLQPLSPQEQKDAYLPAELGVPSKQP-SNYFCKTLIASDTSTHGGFSVPRRAAEKVFPS 59

Query: 161 LDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSL 203
           LDFS QPPAQEL+ARDLHDN W FRHI+RGQPKRHLLTT   L
Sbjct: 60  LDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTEKEL 102


>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
          Length = 366

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 80/218 (36%), Positives = 115/218 (52%), Gaps = 10/218 (4%)

Query: 16  EGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPN 75
           +G G     ++ ++W ACA P   +P  G  V YFP GH+EQ        +   +P    
Sbjct: 9   QGHGDGDSIVDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQ-------HLLAPLPASHR 61

Query: 76  LPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSY-DREALLRSDLALKSNKPQTEFFCK 134
            P    C + +V+L A+  TDEV+A+++L+P P+   R        +  S +    +F  
Sbjct: 62  FP--CTCTVTDVSLGAEDRTDEVFAKISLRPGPAAASRPEPGPGPGSSNSTRQGLSYFVN 119

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
            L   DTST G F +PR   E IFP LD +  PP Q+L+ RD     W F HIY  + ++
Sbjct: 120 ELLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVKIRQ 179

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           H LT GWS FV  K L AGD+++F+R     L+LG+RR
Sbjct: 180 HRLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRR 217


>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
 gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
 gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  146 bits (369), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 68/118 (57%), Positives = 86/118 (72%), Gaps = 2/118 (1%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYRG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R    L S+ L+SD+
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGLASDN 118


>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  146 bits (369), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 68/118 (57%), Positives = 86/118 (72%), Gaps = 2/118 (1%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYRG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R    L S+ L+SD+
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGLTSDN 118


>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 138

 Score =  146 bits (368), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 68/118 (57%), Positives = 86/118 (72%), Gaps = 2/118 (1%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYRG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R    L S+ L+SD+
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGLTSDN 118


>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
          Length = 134

 Score =  146 bits (368), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 68/118 (57%), Positives = 85/118 (72%), Gaps = 2/118 (1%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYRG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDS 249
           P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R    L S+ L SD+
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSNGLXSDN 118


>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
 gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
          Length = 152

 Score =  145 bits (366), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 70/126 (55%), Positives = 90/126 (71%), Gaps = 4/126 (3%)

Query: 124 SNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT 183
           + KP +  F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W 
Sbjct: 6   NEKPAS--FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWK 63

Query: 184 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSS 243
           FRHIYRG P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R    L S+
Sbjct: 64  FRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR--GGLGSN 121

Query: 244 VLSSDS 249
            L+SD+
Sbjct: 122 GLASDN 127


>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
          Length = 135

 Score =  145 bits (365), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/104 (60%), Positives = 78/104 (75%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           F KTLT SD +  GGFSVPR  AE IFP LD++ +PP Q ++A+D+H   W FRHIYRG 
Sbjct: 3   FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62

Query: 192 PKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 235
           P+RHLLTTGWS FV+ K+L AGDS++F+R E   L +GIRRA R
Sbjct: 63  PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKR 106


>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
          Length = 627

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 162/391 (41%), Gaps = 112/391 (28%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K ++ +LWHACAG +V +P   + V YFPQGH+E        +  G       +P+ +LC
Sbjct: 18  KCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFPGG-----RVPALVLC 72

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDR--------EALLRSDLALKSNKPQTEFFCK 134
            +  V   AD +TDEV+A++ L PV + ++             +  A +  KP +  F K
Sbjct: 73  RVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPAS--FAK 130

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKR 194
           TLT SD +  GG  V ++                  +L+A D                  
Sbjct: 131 TLTQSDANNGGGTFVNQK------------------KLVAGD------------------ 154

Query: 195 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----QPANLS--------- 241
                               S++F+R E   L +GIRRA +     P  L          
Sbjct: 155 --------------------SIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPPT 194

Query: 242 ----------SSVLSSDSMHIGILAA----------------AAHAAANNSPFTVFYNPR 275
                     S  L  D     + AA                AA+ A +  PF V Y PR
Sbjct: 195 PAAGGNYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPR 254

Query: 276 ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKN 334
           AS  EF V  A   +A    Q   GMRF+M FETE+S     +MGT++ +   DP+RW N
Sbjct: 255 ASTPEFCVK-AGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPN 313

Query: 335 SQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
           S WR LQV WDE    +   RVS W +E V+
Sbjct: 314 SPWRLLQVSWDEPDLLQNVKRVSPWLVELVS 344


>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 151

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/123 (55%), Positives = 89/123 (72%), Gaps = 2/123 (1%)

Query: 48  VYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPV 107
           ++F +    ++   + K++D QIPNYPNLP +L+C L NV +HAD  TDEVYAQMTLQP+
Sbjct: 30  IFFHRAIVSRLLHQLIKEVDAQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPL 89

Query: 108 -PSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQ 166
            P   +E  L  +L   S +P T +F KTLT S+ STHGGFS+PRR+AEK+FPPLDFS+Q
Sbjct: 90  SPEEQKEPFLPIELGGASKQP-TNYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQ 148

Query: 167 PPA 169
           PP 
Sbjct: 149 PPC 151


>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 123

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/96 (67%), Positives = 76/96 (79%), Gaps = 7/96 (7%)

Query: 20  GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSK 79
           GE++ +N+ELWHACAGPLV+LPA G+ V+YFPQGHSEQVAAS  K++D QIPNYPNLP +
Sbjct: 19  GEQRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQ 78

Query: 80  LLCILLNVTLHADTETDEVYAQMTLQ---PVPSYDR 112
           L+C L N    AD ETDEVYAQMTLQ   PVP   R
Sbjct: 79  LICQLHN----ADVETDEVYAQMTLQLLSPVPMTQR 110


>gi|256857794|gb|ACV31211.1| auxin response factor 1 [Solanum tuberosum]
          Length = 268

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 138/274 (50%), Positives = 175/274 (63%), Gaps = 14/274 (5%)

Query: 504 ISQQSRQNMITQNLPSGPVQAQVLQPQNLVQTSNILQQQPSIQNPQLPANLPQNLQQQQQ 563
           ISQQ RQN+I Q++P+  VQAQ LQ Q+LVQ+ N+LQQQ S QN     NLPQNL QQ Q
Sbjct: 4   ISQQPRQNLINQSVPTNHVQAQXLQAQSLVQSQNVLQQQQSFQNQLQ-RNLPQNLPQQLQ 62

Query: 564 QQHIMGQNQQQNLMQTQLPDPINQNLQMSDKQIQLHLLQKLQQQRQSLLSQQSALQQPAQ 623
              IM Q QQQ+ M  Q  DP+NQ L  SD Q+Q+ LLQKLQQQ              +Q
Sbjct: 63  ---IMNQTQQQSFMPPQPNDPLNQQLHFSDNQLQMQLLQKLQQQSLLAQQSLLQQP--SQ 117

Query: 624 LIQLQDQQRQLLDASQSFSRSGTPTQMLEMHQVTPTSL----PQSNIMSQQIANSGSLNN 679
           L+ +QDQQ+ + D SQ+FSRS   +QML+M Q T TS     PQ  +  QQ+  + S +N
Sbjct: 118 LMPIQDQQKHI-DVSQNFSRSLATSQMLDMSQTTSTSTSLSQPQ--VAQQQMTINNSQSN 174

Query: 680 VQFSQPPQQPKLEQQQ-PGILPQMPGHMGLPASHIINPVSTAGNSALTGAAGVGQSVITD 738
           ++F+Q  Q  K +QQQ PGILP++PG +G       N +S   +S LTGA G GQSV+TD
Sbjct: 175 LRFAQLNQHMKQQQQQQPGILPEIPGQVGQILPLTTNQLSANCSSFLTGAVGGGQSVVTD 234

Query: 739 DNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGE 772
           D PSCSTSPSTNNCQ ++QP +N R HR     +
Sbjct: 235 DIPSCSTSPSTNNCQNVVQPIMNGRIHRGTAAAD 268


>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
 gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
 gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
 gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
          Length = 323

 Score =  133 bits (334), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 97/326 (29%), Positives = 152/326 (46%), Gaps = 34/326 (10%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ ++W  C G  V +P   + V YFPQGH E  ++S        + +        +CI+
Sbjct: 17  VHPQIWQTCTGAAVQIPKLHSRVYYFPQGHLEHASSSSSNAYIHSL-DLQRFRPFTICII 75

Query: 85  LNVTLHADTETDEVYAQMTLQPVPS----YDREALLRSDLALKSNKPQTEFFCKTLTASD 140
             V L AD  TDEV+A++ L PV +     D   +              + F + L  ++
Sbjct: 76  SAVDLLADPHTDEVFAKLLLTPVTNNSCVQDPHEVPNCSNDDDVCDEVIDSFTRILALTN 135

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL-TT 199
            S H  F +PR  AE +FPPL   +   +Q L+  D+H  +W F H+  G  KR++  T+
Sbjct: 136 VSKH-AFYIPRFCAENMFPPLGMEV---SQHLLVTDVHGEVWKFHHVCHGFAKRNVFYTS 191

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR---ANRQPANLSSSVLSSDSMHIGILA 256
            W+ FV  K+L  GD+V+F+++   +L +GIRR   A ++   L  +V+           
Sbjct: 192 EWASFVERKKLDVGDAVVFMKNSTGKLFVGIRRKDAAEQKKDELEKAVME---------- 241

Query: 257 AAAHAAANNSPFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
            A   A  N PF + Y PR     +FVV          S +I    R R+  +T++S   
Sbjct: 242 -AVKLAEENKPFEIVYYPRGDDWCDFVV---DGNIVDESMKIQWNPRMRVKMKTDKSSRI 297

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQ 341
            Y GTIT +S        ++ WR LQ
Sbjct: 298 PYQGTITTVSR------TSNLWRMLQ 317


>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
          Length = 273

 Score =  132 bits (332), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 84/231 (36%), Positives = 118/231 (51%), Gaps = 23/231 (9%)

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
           +  +P+   F K LTASD +    FSV    A+ +FP LD+S+  P Q +  RD+H   W
Sbjct: 48  QHQQPRPVSFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGVEW 107

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR----QPA 238
            F HI+RG PKRHLLT GW+ FV+ K+L  GDSV+F+R+E  ++ +G+RR NR       
Sbjct: 108 MFCHIWRGSPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFGAMQG 167

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSP-----FTVFYNPRASPSEFVVPLAKYYKAVH 293
           N      +      G ++     AA         F V Y P  + SEF V +A   +++ 
Sbjct: 168 NGGGPAGAVVGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVAAVKESM- 226

Query: 294 SNQISLGMRFRMMFETEESGTRR---YMGTITGISDLDPVRWKNSQWRNLQ 341
                     +M FETEES   +   +MGTI  +   DP  W  S WR L+
Sbjct: 227 ----------QMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267


>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
          Length = 109

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%)

Query: 102 MTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPP 160
           MTLQP+ P   ++A L ++L + S +P + +FCKTL ASDTSTHGGFSVPRRAAEK+FPP
Sbjct: 1   MTLQPLSPQEQKDAYLPAELGVPSKQP-SNYFCKTLIASDTSTHGGFSVPRRAAEKVFPP 59

Query: 161 LDFSMQPPAQELMARDLHDNIWTFRHIYR 189
           LDFS QPPAQEL+ARDLHDN W FRHI+R
Sbjct: 60  LDFSQQPPAQELIARDLHDNEWKFRHIFR 88


>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
 gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
          Length = 283

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 94/177 (53%), Gaps = 40/177 (22%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
            E  GG+KK IN  LW  C GPL+ LPA G+ VVYFPQG++EQV AS +K+ D  IP   
Sbjct: 3   AEMEGGDKKAINQALWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQKEADFDIPIS- 61

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
                         LHAD E DEV+AQMTLQP  S   +  L  D  +++ +     F +
Sbjct: 62  -------------HLHADQENDEVFAQMTLQPF-SQTADPFLLPDFGIQTKQTIVS-FSR 106

Query: 135 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQ 191
           TLT                        DF+  PPAQEL+ARDLH+  W FRHIYRG+
Sbjct: 107 TLT------------------------DFTQTPPAQELVARDLHNIEWRFRHIYRGR 139


>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
          Length = 192

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/149 (48%), Positives = 90/149 (60%), Gaps = 22/149 (14%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           + TELW+ CAGPLV +P  G  V YFPQGH EQV AS  +  +  +  Y +LP K+LC +
Sbjct: 39  MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFY-DLPWKILCEV 97

Query: 85  LNVTLHADTETDEVYAQMTLQP------------VPSYDREALLRSDLALKSNKPQTEFF 132
           +NV L A+ + DEVYAQ+TL P            +P+    AL R         P+   F
Sbjct: 98  MNVELKAEPDNDEVYAQLTLLPESKPEENGSSEEMPASPPAALAR---------PRVHSF 148

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFPPL 161
           CKTLTASDTSTHGGFSV RR A++  PPL
Sbjct: 149 CKTLTASDTSTHGGFSVLRRHADECLPPL 177


>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
          Length = 497

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/144 (48%), Positives = 93/144 (64%), Gaps = 4/144 (2%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKK-DIDGQIPNYPNLP 77
           GGE   +  ELW  CAGPLV++P A   V YFPQGH EQ+ AS ++ D++   P +  LP
Sbjct: 40  GGE--YLYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFV-LP 96

Query: 78  SKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLT 137
            K+LC ++NV+L A+ +TDEVYAQ+TL PV +   E +       +  +P+   F K LT
Sbjct: 97  PKILCNVMNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQRPKVHSFSKVLT 156

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPL 161
           ASDTSTHGGFSV R+ A +  PPL
Sbjct: 157 ASDTSTHGGFSVLRKHATECLPPL 180


>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 147/354 (41%), Gaps = 91/354 (25%)

Query: 23  KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           K ++ +LWHACAG +V++P+  + VVYFPQGH+E    ++           P +P  +LC
Sbjct: 13  KCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-------GNPRIPPLVLC 65

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTS 142
            +  V   AD E+DE                            KP +  F KTLT SD +
Sbjct: 66  RVSAVKYLADPESDEA-------------------------PEKPAS--FAKTLTQSDAN 98

Query: 143 THGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWS 202
             GG+S                               N    +++  G     L      
Sbjct: 99  NGGGWS-------------------------------NFVNKKNLVAGDSIVFLRAENGD 127

Query: 203 LFVS---GKRLFAGDSVL--FIRDEKQQLLL-----GIRRANRQPANLSSSVLSSDSMHI 252
           L V     KR   G      F+R+++ + +L     G R   R  A              
Sbjct: 128 LCVGIRRAKRAGCGPEGYSGFLREDENRPILTHSNAGFRGKGRVRAE------------- 174

Query: 253 GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEES 312
             +A AA  AAN  PF + Y PRAS  EF V  A   +A    Q   GM+F+M FET++S
Sbjct: 175 -SVAEAATLAANGQPFVIVYYPRASTPEFCVK-ASSVRAAMQIQWCPGMKFKMAFETDDS 232

Query: 313 G-TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 365
                +MG I+ +   DP+RW NS WR LQV WDE    +   RV+ W +E V+
Sbjct: 233 SRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLVELVS 286


>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
          Length = 533

 Score =  126 bits (317), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 99/166 (59%), Gaps = 22/166 (13%)

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRM+FETEES  RRYMGTITGISDLDPVRW NS WR+++VGWDESTAGE++ RVS+WE
Sbjct: 1   MRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 60

Query: 361 IEPVTA-PFF--ICPPPFFRSKHP-----RQADDDASDLDNVFKRTMPWIGDDFGVKDSQ 412
           IEP+T  P +  + P    R  HP       + D+AS+        + W+    G     
Sbjct: 61  IEPLTTFPMYPSLFPLRLKRPWHPGSPSLLDSRDEASN-------GLMWLR---GGSGEP 110

Query: 413 SLPGL----SLVQWMNMQQNPSLANAMQSSYMHSLPGSILQNLNGG 454
            LP L    +++ WM  + +P++     +    ++  + +QNL  G
Sbjct: 111 GLPSLNFQANMLPWMQQRLDPTMLGNDHNQRYQAMLAAGMQNLGSG 156


>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
 gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
          Length = 239

 Score =  125 bits (315), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 10/208 (4%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           TI T++W  C G  V +P   + V YFPQGH + V+      I   +  YP  PS + CI
Sbjct: 34  TIPTKIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHT---IITLLHCYP--PS-ISCI 87

Query: 84  LLNVTLHADTETDEVYAQMTLQPV---PSYDREALLRSDLALKSNKPQTEFFCKTLTASD 140
           +  V L  D  TDEV+A++ L PV     +++EA      A   +      F K LT SD
Sbjct: 88  ISAVDLLVDPHTDEVFAKLLLTPVMDGHGHEQEAPPEVP-AEDDDGYNVVSFVKILTQSD 146

Query: 141 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTG 200
            ++  GF VP    + I P L      P+Q+L   D+   IW + HIYRG+ KRHL + G
Sbjct: 147 CNSGCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRGKSKRHLFSRG 206

Query: 201 WSLFVSGKRLFAGDSVLFIRDEKQQLLL 228
           W+ FV+ K+L AGDS +FI++    L+L
Sbjct: 207 WTSFVNNKKLVAGDSFVFIKNSAWWLML 234


>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
 gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
          Length = 377

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 156/344 (45%), Gaps = 23/344 (6%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ ++W  C GP V +P   + V YFP+GH E   +S        +  Y    S + CI+
Sbjct: 9   VDPKIWQICVGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYR---SSIPCIV 65

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
            +V L  D  TDEV+A++ L PV   +    +        +      + KTLT SD +  
Sbjct: 66  SSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQE-DDDGDNLVSYVKTLTQSDCTR- 123

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
               VP   +  IFP LD      +Q +   DL +  W + + Y    + H   TGW  F
Sbjct: 124 -VLCVPIECSNLIFPKLDLDK---SQSITVTDLKNQEWRYTYTYSNSSRLH---TGWLNF 176

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           V  K+L A DSV+FI++   ++ +GIRR  +   + ++    + +  I +L  AA  A  
Sbjct: 177 VREKKLVANDSVVFIKNSAGKISVGIRRNTKFTTDEAAEGSENLTDEIKVL-DAAELAEK 235

Query: 265 NSPFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM----- 318
           N+ F V Y P AS   +FVV       A+     S GMR ++  +  ES   +       
Sbjct: 236 NTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKS-GMRVKLPLKKYESSNSKMTISQLK 294

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 362
           GTI+ + +          WR L+V WD     +  N V+ W++E
Sbjct: 295 GTISFVFNHSS---NVPNWRILEVNWDGLDIPQIPNLVNPWQVE 335


>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 476

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 63/147 (42%), Positives = 89/147 (60%), Gaps = 2/147 (1%)

Query: 220 RDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPS 279
           R +  +L LG+RRA +     +   L S   ++G LA   HA +  S F +FYNPR S S
Sbjct: 12  RGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQS 71

Query: 280 EFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRN 339
           EF+VP  K+ K++ S   S+G RF+M +E+E++  RRY G ITG  D DP RW+ S+W+ 
Sbjct: 72  EFIVPYWKFTKSI-SQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADP-RWRGSKWKC 129

Query: 340 LQVGWDESTAGEKRNRVSIWEIEPVTA 366
           L V WD+     + NR+S WEIE  +A
Sbjct: 130 LLVRWDDDGEFRRPNRLSPWEIELTSA 156


>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
          Length = 155

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 67/144 (46%), Positives = 88/144 (61%), Gaps = 4/144 (2%)

Query: 12  SNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
           SN    G G K  +  E W ACAGPLV++   G  V  FPQGH EQ+ AS  ++++ +IP
Sbjct: 15  SNFSGQGNGVKDALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQLEASTNQELNQRIP 74

Query: 72  NYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKS-NKPQTE 130
            + NLP K+LC + N+ L A+ +TDEVYAQ+TL  +P  D+   +  D   +   KP   
Sbjct: 75  MF-NLPPKILCRVFNIQLLAEQDTDEVYAQITL--MPEADQTEPISPDSCPEEPPKPDVH 131

Query: 131 FFCKTLTASDTSTHGGFSVPRRAA 154
            FCK LTASDTSTHG FSV R+  
Sbjct: 132 SFCKVLTASDTSTHGEFSVLRKTC 155


>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
 gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
          Length = 170

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/193 (44%), Positives = 107/193 (55%), Gaps = 43/193 (22%)

Query: 112 REALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQE 171
           +EA L ++L   S +P T +FCKTLTAS  +                           Q 
Sbjct: 8   KEAYLPAELGTPSKQP-TNYFCKTLTASQVT---------------------------QA 39

Query: 172 LMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI-------RDEKQ 224
           L      D +     + +    RHLLTTGWS+FVS K L AGDSV+F        R+EK 
Sbjct: 40  LTG----DCLCLVGRLKKCFLLRHLLTTGWSVFVSAKILVAGDSVMFTWQCIFFNRNEKN 95

Query: 225 QLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVP 284
           QLL GIR A      + SSVLS+DS+H+G+LAA AHAAA NSPFT+FYNPRA PSEFV+P
Sbjct: 96  QLLFGIRHAIWPQTVMPSSVLSTDSLHLGLLAAVAHAAATNSPFTIFYNPRACPSEFVIP 155

Query: 285 ----LAKYYKAVH 293
               + +Y K V+
Sbjct: 156 SLSIMLEYVKVVY 168


>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
 gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
          Length = 412

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 64/129 (49%), Positives = 84/129 (65%), Gaps = 4/129 (3%)

Query: 233 ANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAV 292
           AN    +L SSVLS+++M I  L  AA    N +   V Y P A  SEFVVPL+KY  A+
Sbjct: 30  ANSHRISLPSSVLSANNMPIDALVVAA----NRTLLPVVYYPGACVSEFVVPLSKYNNAL 85

Query: 293 HSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK 352
             +Q+S+G+RF MMFET+   T   MGTI GISDLDP+ W +S+W+N++V WD+   G K
Sbjct: 86  FVSQLSIGLRFDMMFETKAFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGK 145

Query: 353 RNRVSIWEI 361
            NRV  W+I
Sbjct: 146 PNRVCSWDI 154


>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
 gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
          Length = 377

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 157/348 (45%), Gaps = 21/348 (6%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           ++ ++W  CAGP V +P   + V YFP+GH E   +S        +  Y    S + CI+
Sbjct: 9   VDPKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYR---SSIPCIV 65

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTH 144
            +V L  D  TDEV+A++ L PV   +    +        +      + KTLT SD +  
Sbjct: 66  SSVDLFVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQE-DDDGDNLVSYVKTLTQSDCTR- 123

Query: 145 GGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLF 204
               VP   +  IFP LD      +Q +   DL +    + + Y    + H   TGW  F
Sbjct: 124 -VLCVPIECSNLIFPKLDLDK---SQSITVTDLKNQERGYTYTYSNSSRLH---TGWLNF 176

Query: 205 VSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAAN 264
           V  K+L A DSV+FI++   ++ +GIRR  +   + +     + +  I +L  AA  A  
Sbjct: 177 VREKKLVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVL-DAAELAEK 235

Query: 265 NSPFTVFYNPRASP-SEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITG 323
           N+ F V Y P AS   +FVV       A+     S GMR ++  +  ES   +   TI+ 
Sbjct: 236 NTAFDVVYYPTASGWRDFVVDAKTVDDAMKIGWKS-GMRVKLPLKKYESSNSKM--TISQ 292

Query: 324 ISDLDPVRWKNS----QWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           +       + +S     WR L+V WD     +  N V+ W++E    P
Sbjct: 293 LKGTISFVYNHSSNVPNWRMLEVNWDGLDIPQNPNLVNPWQVEVYNIP 340


>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
 gi|223949733|gb|ACN28950.1| unknown [Zea mays]
 gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
          Length = 446

 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 155/360 (43%), Gaps = 44/360 (12%)

Query: 19  GGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPS 78
           G    T++ ++W ACA P   +P  G  V YFP GH EQ        +  Q         
Sbjct: 12  GVGDNTVDRDVWLACAAPFSRIPTVGDEVYYFPDGHIEQHQHLSAAPLPAQ--------D 63

Query: 79  KLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP------QTEFF 132
           +  C + +V+L  D +TDEV+A+++L+P P            +  S  P      +  +F
Sbjct: 64  RFHCTVTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPAPGPPQKLRYF 123

Query: 133 CKTLTASDTSTHGGFSVPRRAAEKIFP----PLDFSMQPPA--QELMARDLHDNIWTFRH 186
            K L  S T  +  F +P    E + P      D + Q     Q+++ RD     W F  
Sbjct: 124 TKDL--SQTDVYAKFRIPLE-NEHVLPIPKVETDGADQQRVQRQDVVMRDTRGKSWRFSE 180

Query: 187 IYRGQP-KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRAN---RQPANLSS 242
            YR  P K H L TGW  F   KRL AGD ++F+R     L++G+RR +    +P +   
Sbjct: 181 TYRVNPSKEHSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLHVPRYRPFDFQG 240

Query: 243 SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSN-QISLGM 301
              + D M    LAAA        PFTV Y PR +  EF+VP ++   A+ ++ +    +
Sbjct: 241 P--AQDVMEAVRLAAAGR------PFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGAVV 292

Query: 302 RFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEI 361
           R  +M +     T    G +  I        + + WR L++ W           V+ W++
Sbjct: 293 RMEVMEDENRQHTVWVHGRVNAI--------RQNIWRMLEIIWGVDPPLATTRSVNAWQV 344


>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
 gi|194689238|gb|ACF78703.1| unknown [Zea mays]
          Length = 430

 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 168/374 (44%), Gaps = 33/374 (8%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           T++ ++W ACA P   +P  G  V YFP GH EQ  ++  + +  Q         +  C 
Sbjct: 58  TVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQ--------HRFHCT 109

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP----QTEFFCKTLTAS 139
           + +V+L  D +TDEV+A+++L+P P            +  S  P    +  +F K L  S
Sbjct: 110 VTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKEL--S 167

Query: 140 DTSTHGGFSVPRRAAEKIFP-PLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP-KRHLL 197
            T  +  F +P    E + P P+  +     Q+++ RD     W F   Y   P K+H L
Sbjct: 168 QTDVYARFRIPL-DNEHVLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSL 226

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGW  F   KRL AGD ++F+R     L++G+RR +     L              +  
Sbjct: 227 TTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDVME 286

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A   AA   PFTV Y PR +  EF+VP ++   A+ +     G   RM  E  E   R+Y
Sbjct: 287 AVRLAAAGRPFTVTYFPRQAAVEFIVPRSEVDDAL-ATSWEPGALVRM--EVMEDENRQY 343

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAG---EKRNRVSIWEIEPVTAPFFICPPP 374
              + G   ++ +R   + WR L++ W   +          V+ W+   V+ P+   PP 
Sbjct: 344 TMWVVG--RVEAIR--QNIWRMLEIIWGVPSHPPPLATMRSVNAWQ---VSRPW---PPE 393

Query: 375 FFRSKHPRQADDDA 388
             R + P Q  D+A
Sbjct: 394 GHRRREPHQFGDEA 407


>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
 gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
          Length = 418

 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 168/374 (44%), Gaps = 33/374 (8%)

Query: 24  TINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           T++ ++W ACA P   +P  G  V YFP GH EQ  ++  + +  Q         +  C 
Sbjct: 58  TVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQ--------HRFHCT 109

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP----QTEFFCKTLTAS 139
           + +V+L  D +TDEV+A+++L+P P            +  S  P    +  +F K L  S
Sbjct: 110 VTDVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKEL--S 167

Query: 140 DTSTHGGFSVPRRAAEKIFP-PLDFSMQPPAQELMARDLHDNIWTFRHIYRGQP-KRHLL 197
            T  +  F +P    E + P P+  +     Q+++ RD     W F   Y   P K+H L
Sbjct: 168 QTDVYARFRIPL-DNEHVLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSL 226

Query: 198 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAA 257
           TTGW  F   KRL AGD ++F+R     L++G+RR +     L              +  
Sbjct: 227 TTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQDVME 286

Query: 258 AAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRY 317
           A   AA   PFTV Y PR +  EF+VP ++   A+ +     G   RM  E  E   R+Y
Sbjct: 287 AVRLAAAGRPFTVTYFPRQAAVEFIVPRSEVDDAL-ATSWEPGALVRM--EVMEDENRQY 343

Query: 318 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAG---EKRNRVSIWEIEPVTAPFFICPPP 374
              + G   ++ +R   + WR L++ W   +          V+ W+   V+ P+   PP 
Sbjct: 344 TMWVVG--RVEAIR--QNIWRMLEIIWGVPSHPPPLATMRSVNAWQ---VSRPW---PPE 393

Query: 375 FFRSKHPRQADDDA 388
             R + P Q  D+A
Sbjct: 394 GHRRREPHQFGDEA 407


>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
          Length = 496

 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 145/353 (41%), Gaps = 58/353 (16%)

Query: 25  INTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCIL 84
           I+  +W ACA PL  +P  GT V YFP+GH+EQ  A +   +       P+     LC +
Sbjct: 24  IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPL-------PSAHRFFLCTI 76

Query: 85  LNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP-----QTEFFCKTLTAS 139
             V L ADT T E YA ++L P+  +D  A   +     +        +  ++ K LT S
Sbjct: 77  TAVDLSADTTTGEPYATISLLPL-RHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQS 135

Query: 140 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
           D +  GGFSVPR  A+ IFP L+    PP  E                + G P   L+  
Sbjct: 136 DANNGGGFSVPRLCADHIFPALNLDDDPPRPE---------------PHHGGPAGRLVGI 180

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
              L        A D V  +R E+Q            P  +  +V               
Sbjct: 181 PPHLPRHAAPAPADDRVEQVR-ERQAAGGRGHGGVHVPQEVMEAV--------------- 224

Query: 260 HAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM- 318
             AA  + F V Y PR    EFVVP  +  K + +     GM+ R     E   TRR   
Sbjct: 225 RLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGL-TTPWRCGMQVRAQV-MEAEDTRRLAW 282

Query: 319 --GTITGISDLDPVRWKNSQWRNLQVGWDESTAGEK-RNR-VSIWEIEPVTAP 367
             GT+T +            WR L+V WD S A    +NR V+ W+++PV  P
Sbjct: 283 LNGTLTNLR-------HQQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVDFP 328


>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
          Length = 728

 Score =  117 bits (293), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 152/347 (43%), Gaps = 48/347 (13%)

Query: 25  INTELWHACAGPLVN-LPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           I+ ++WHACA P    LP  GT V Y P GH EQ A    +D    +   P+    + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCA----EDPALLLSRLPDPIHPVPCT 74

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           + ++ L  D E+ E YA ++L P  S+D     R   A    +P   FF K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLP-GSHDDTTARRQVPA--HGEPGFRFFEKQLSPADVTS 131

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL------ 197
           +    +P   AE + PPLD +    A+    RDL    + F HI+  +  R++L      
Sbjct: 132 NA-LVLPA-GAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVN 189

Query: 198 -TTGWSLFVSGKRLFAGDSVLFIR------DEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
              GW  FV  KRL   D+V+F+R      D   +LL+G+RRA R            D+ 
Sbjct: 190 DNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK 249

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKY--------YKAVHSNQISLGMR 302
              +++    A    +PF V Y PR    EFVV   +Y        Y  V    + L M 
Sbjct: 250 ---VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMN 306

Query: 303 FRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
              + ++         GT+     L P       WR L+V WD++ +
Sbjct: 307 PLQIAQS-------ISGTVRTFDHLRP-------WRMLEVDWDQAAS 339



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 126/288 (43%), Gaps = 45/288 (15%)

Query: 95  TDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGG-----FSV 149
           +D+ YA ++L P   Y     L +       + +  FF K L+ SD + +GG     F +
Sbjct: 399 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGGGSGALFVI 458

Query: 150 PR-RAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG-----QPKRHLLTTGWSL 203
           P+  AAE + P +         +L   +L    W F H +       +   H L  GWS 
Sbjct: 459 PKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSA 510

Query: 204 FVSGKRLFAGDSVLFIRDE-KQQLLLGIRRANRQPANLSSSVLSSDSMHIGI----LAAA 258
           FV  KRL  GD+V+F+R     + L+G+RR                 M +GI    +A A
Sbjct: 511 FVKAKRLCVGDTVIFMRRRPGGEPLVGVRRK------------PHGGMPVGIPDKHVADA 558

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
              A++  PF V Y P    +EFVV   +  +   S  ++ G R R++   +++  R   
Sbjct: 559 WLDASSAQPFRVTYCPWQGTAEFVV---RREEVEGSPPLAPGTRVRLLMNPDDARRRSQP 615

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDEST--AGEKRNRVSIWEIEPV 364
                + D+       S+WR L+V WD  +  A     RV+ W+++PV
Sbjct: 616 PVYGTVRDVH----CRSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 659


>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
 gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
 gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
          Length = 752

 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 152/347 (43%), Gaps = 48/347 (13%)

Query: 25  INTELWHACAGPLVN-LPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           I+ ++WHACA P    LP  GT V Y P GH EQ A    +D    +   P+    + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCA----EDPALLLSRLPDPIHPVPCT 74

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           + ++ L  D E+ E YA ++L P  S+D     R   A    +P   FF K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLP-GSHDDTTARRQVPA--HGEPGFRFFEKQLSPADVTS 131

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL------ 197
           +    +P   AE + PPLD +    A+    RDL    + F HI+  +  R++L      
Sbjct: 132 NA-LVLPA-GAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGVN 189

Query: 198 -TTGWSLFVSGKRLFAGDSVLFIR------DEKQQLLLGIRRANRQPANLSSSVLSSDSM 250
              GW  FV  KRL   D+V+F+R      D   +LL+G+RRA R            D+ 
Sbjct: 190 DNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGVEDNK 249

Query: 251 HIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKY--------YKAVHSNQISLGMR 302
              +++    A    +PF V Y PR    EFVV   +Y        Y  V    + L M 
Sbjct: 250 ---VVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTVHLRMN 306

Query: 303 FRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA 349
              + ++         GT+     L P       WR L+V WD++ +
Sbjct: 307 PLQIAQS-------ISGTVRTFDHLRP-------WRMLEVDWDQAAS 339



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 45/290 (15%)

Query: 93  TETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGG-----F 147
           + +D+ YA ++L P   Y     L +       + +  FF K L+ SD + +GG     F
Sbjct: 421 SASDDSYAMISLFPGDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGGGSGALF 480

Query: 148 SVPR-RAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG-----QPKRHLLTTGW 201
            +P+  AAE + P +         +L   +L    W F H +       +   H L  GW
Sbjct: 481 VIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGW 532

Query: 202 SLFVSGKRLFAGDSVLFIRDE-KQQLLLGIRRANRQPANLSSSVLSSDSMHIGI----LA 256
           S FV  KRL  GD+V+F+R     + L+G+RR                 M +GI    +A
Sbjct: 533 SAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRRK------------PHGGMPVGIPDKHVA 580

Query: 257 AAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR 316
            A   A++  PF V Y P    +EFVV   +  +   S  ++ G R R++   +++  R 
Sbjct: 581 DAWLDASSAQPFRVTYCPWQGTAEFVV---RREEVEGSPPLAPGTRVRLLMNPDDARRRS 637

Query: 317 YMGTITGISDLDPVRWKNSQWRNLQVGWDEST--AGEKRNRVSIWEIEPV 364
                  + D+       S+WR L+V WD  +  A     RV+ W+++PV
Sbjct: 638 QPPVYGTVRDVH----CRSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 683


>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
 gi|194708626|gb|ACF88397.1| unknown [Zea mays]
          Length = 543

 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 78/116 (67%), Gaps = 2/116 (1%)

Query: 268 FTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDL 327
           FTV+Y PR SPSEF++P  +Y ++V +N  S+GMRFRM FE EE+  +R+ GTI G  +L
Sbjct: 2   FTVYYKPRTSPSEFIIPYDQYMESVKNN-YSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60

Query: 328 DPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPFFRSKHPRQ 383
           DP+ W +S WR L+V WDE +   + +RVS W+IEP ++P         R+K PRQ
Sbjct: 61  DPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKRPRQ 115


>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
          Length = 796

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 161/378 (42%), Gaps = 60/378 (15%)

Query: 12  SNSGEGGGGEKKTINTELWHACAGP-LVNLPAAGTHVVYFPQGHSEQVA---ASMKKDID 67
           ++ G+G       ++  +W ACA P    LPA G+ V YF  GH+EQ     A + + + 
Sbjct: 9   ADDGDG------IVDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQL- 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD---REALLRSDLALKS 124
             +P     P   LC +  V L AD  T+E YA +TL PV  +D            A   
Sbjct: 62  -AVPG----PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGG 116

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
            + Q  +F KTL +SD      F+VP   A+ +FPPL  +     Q L+ +DL  +  TF
Sbjct: 117 QQQQLRYFVKTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTF 174

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFI-RDEKQQLLLGIR-----------R 232
            +   G   R  L   W  F        GDSV+F+ R +  +L +G+R           R
Sbjct: 175 DYGRNGN--RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTR 232

Query: 233 ANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAV 292
            +R P  L  +V          + AAA  AA    FT  Y  R    EFVVP     + V
Sbjct: 233 RSRPPTPLPVAVQE--------VIAAAGRAAAGEQFTATYRSRQDGDEFVVP-----REV 279

Query: 293 HSNQISLGMRFRMMFETE-----ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES 347
               + L  RF    E E     E G    +G    I+ +    W    WR++++GW   
Sbjct: 280 VEEGLRLRSRFTPEMEVEFVWALEDGAPPSVGPHGKITAIHDTTW---MWRSVEIGW--- 333

Query: 348 TAGEKRNRVS-IWEIEPV 364
           T G + N+ +  W++  V
Sbjct: 334 TGGSEMNKYANFWQVRLV 351



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 152/349 (43%), Gaps = 70/349 (20%)

Query: 24  TINTELWHACAGPLV-NLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLC 82
           +I  E+W ACA P    LPA G+ V YFP GH++Q  +   + + G++          LC
Sbjct: 403 SITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQCPSRPPEPLPGRV---------FLC 453

Query: 83  ILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF----FCKTLTA 138
            +  V L  D   +E++A M+L PV + D+    ++      + PQ +     F K LT 
Sbjct: 454 KVTAVRL--DATRNELFATMSLIPV-ARDQAIQPQAPADPGPSSPQVKTTLVSFVKPLTC 510

Query: 139 SD-TSTHGGFSVPRR-AAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHL 196
           +D       F VP+R AA  + P L  +   P   L  +D+H   W   + ++     H+
Sbjct: 511 TDAVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKEY--THM 565

Query: 197 LTTGWSLFVSGKRLFAGDSVLFIRD-EKQQLLLGIRRANRQPANLSSSVLSSDSMHIGIL 255
           L++GW  F +  RL  GD+V+F+R  +  +  +G+RR            L  + + +  +
Sbjct: 566 LSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRT-----------LKPEPVSVDEV 614

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTR 315
             A   AA   PF V Y  R    EFVVPL            ++G +             
Sbjct: 615 IEAVWRAARLEPFEVAYLSRQDGDEFVVPLP-----------NVGPQ------------- 650

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
              G +  I +     +  S WR +QV W  S AG  R  V+ W+I  V
Sbjct: 651 ---GKVIAIEN-----YATSIWRMIQVEW-PSCAGMNRY-VNFWQIREV 689


>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
           Os07g0183300/Os07g0183600
 gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
          Length = 762

 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 156/365 (42%), Gaps = 54/365 (14%)

Query: 25  INTELWHACAGP-LVNLPAAGTHVVYFPQGHSEQVA---ASMKKDIDGQIPNYPNLPSKL 80
           ++  +W ACA P    LPA G+ V YF  GH+EQ     A + + +   +P     P   
Sbjct: 16  VDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQL--AVPG----PRVF 69

Query: 81  LCILLNVTLHADTETDEVYAQMTLQPVPSYD---REALLRSDLALKSNKPQTEFFCKTLT 137
           LC +  V L AD  T+E YA +TL PV  +D            A    + Q  +F KTL 
Sbjct: 70  LCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFVKTLM 129

Query: 138 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLL 197
           +SD      F+VP   A+ +FPPL  +     Q L+ +DL  +  TF +   G   R  L
Sbjct: 130 SSDAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN--RVTL 185

Query: 198 TTGWSLFVSGKRLFAGDSVLFI-RDEKQQLLLGIR-----------RANRQPANLSSSVL 245
              W  F        GDSV+F+ R +  +L +G+R           R +R P  L  +V 
Sbjct: 186 AKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPLPVAVQ 245

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
                    + AAA  AA    FT  Y  R    EFVVP     + V    + L  RF  
Sbjct: 246 E--------VIAAAGRAAAGEQFTATYRSRQDGDEFVVP-----REVVEEGLRLRSRFTP 292

Query: 306 MFETE-----ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVS-IW 359
             E E     E G    +G    I+ +    W    WR++++GW   T G + N+ +  W
Sbjct: 293 EMEVEFVWALEDGAPPSVGPHGKITAIHDTTW---MWRSVEIGW---TGGSEMNKYANFW 346

Query: 360 EIEPV 364
           ++  V
Sbjct: 347 QVRLV 351



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 134/308 (43%), Gaps = 39/308 (12%)

Query: 69  QIPNYPNLPSKLLCILLNVT-LHADTETDEVYAQMTLQPVPSYDREALLR----SDLALK 123
           Q P+ P  P      L  VT +  D   +E++A M+L PV    R+  ++    +D    
Sbjct: 375 QCPSRPPEPLPGRVFLCKVTAVRLDATRNELFATMSLIPVA---RDQAIQPQAPADPGPS 431

Query: 124 SNKPQTEF--FCKTLTASD-TSTHGGFSVPRR-AAEKIFPPLDFSMQPPAQELMARDLHD 179
           S + QT    F K LT +D       F VP+R  A  + P L  +   P   L  +D+H 
Sbjct: 432 SPQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHG 488

Query: 180 NIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD-EKQQLLLGIRRANRQPA 238
             W   + ++     H+L++GW  F +  RL  GD+V+F+R  +  +  +G+RR      
Sbjct: 489 KEWVINYTWKEYT--HMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRT----- 541

Query: 239 NLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQIS 298
                 L  + + +  +  A   AA   PF V Y  R    EFVVP    + A+ + + +
Sbjct: 542 ------LKPEPVSVDEVIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRA-KFT 594

Query: 299 LGMRFRMMFETEESGTRRY--MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRV 356
            GM    ++  EE         G +  I +     +  S WR +QV W  S AG  R  V
Sbjct: 595 PGMVVNFVWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEW-PSCAGMNRY-V 647

Query: 357 SIWEIEPV 364
           + W+I  V
Sbjct: 648 NFWQIREV 655


>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
 gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
 gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
 gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
          Length = 407

 Score =  110 bits (274), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 162/376 (43%), Gaps = 52/376 (13%)

Query: 12  SNSGEGGGGEKKTINTELWHACAGP-LVNLPAAGTHVVYFPQGHSEQVA---ASMKKDID 67
           ++ G+G       ++ ++W ACA P    LPA G+ V YF  GH+ Q     A + + + 
Sbjct: 9   ADDGDG------IVDRDMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQL- 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP 127
             +P     P   LC +  V L AD  T+E YA++TL PV  +D   L  +     +   
Sbjct: 62  -AVPG----PRVFLCTVAAVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAA 116

Query: 128 ---QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
              Q  +F KTL  SD      FS P   A+ +FPPL  +     Q L+ +DLH +  TF
Sbjct: 117 GGQQLRYFVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKA--VQPLLVKDLHGSPMTF 174

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQ-----QLLLGIRRANRQPAN 239
            +  +G  KR  L   W  F        GDSV+F+R         +L +G+RR       
Sbjct: 175 DYGRKG--KRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERP 232

Query: 240 LSSSVLSS------DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVH 293
           L +++          +     + AAA  AA    FTV Y  R    EFVVP     + + 
Sbjct: 233 LRNTMRRYRPPTPPQAAVQEAVLAAAGHAAAGERFTVAYRSRKDGDEFVVPREAVEEGLR 292

Query: 294 SNQISLGMRFRMMFETEES-----GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDEST 348
           +   SL      ++  E+      G R   G +T I+           WRNL++ WD ++
Sbjct: 293 ARLTSLA-EVEFVWAVEDGAPPIVGPR---GKVTAIA-------TGQLWRNLEIVWDGNS 341

Query: 349 AGEKRNRVSIWEIEPV 364
             E     + W++ PV
Sbjct: 342 --EMDMSANFWQVRPV 355


>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
          Length = 722

 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 163/377 (43%), Gaps = 74/377 (19%)

Query: 25  INTELWHACAGPLVN-LPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           I+ ++WHACA P    LP  GT V Y P GH EQ A    +D    +   P+    + C 
Sbjct: 19  IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCA----EDPALLLSRLPDPIHPVPCT 74

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTST 143
           + ++ L  D E+ E YA ++L P  S+D     R   A    +P   FF K L+ +D ++
Sbjct: 75  VADLVLDVDAESGEAYATISLLP-GSHDDTTARRQVPA--HGEPGFRFFEKQLSPADVTS 131

Query: 144 HGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH-----IYRGQPKRHLL- 197
           +    +P   AE + PPLD +    A+    RDL    + F H     I+  +  R++L 
Sbjct: 132 N-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYMLG 189

Query: 198 ------TTGWSLFVSGKRLFAGDSVLFIR--------DEKQQLLLGIRRANR-------Q 236
                   GW  FV  KRL   D+V+F+R        D   +LL+G+RRA R       +
Sbjct: 190 DLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHPR 249

Query: 237 PANLSSSVLSSDSMHI-GILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKY------- 288
           P    + V+S   + + G+           +PF V Y PR    EFVV   +Y       
Sbjct: 250 PGVEDNKVVSEVWLEMQGV-----------TPFEVTYYPREGTFEFVVSRDEYIGFSFSP 298

Query: 289 -YKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDES 347
            Y  V    + L M    + ++         GT+     L P       WR L+V WD++
Sbjct: 299 FYPFVPGTTVHLRMNPLQIAQS-------ISGTVRTFDHLRP-------WRMLEVDWDQA 344

Query: 348 T---AGEKRNRVSIWEI 361
               +   R +V+ W++
Sbjct: 345 ASPISYRIRRQVNSWQV 361



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 118/288 (40%), Gaps = 58/288 (20%)

Query: 95  TDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGG-----FSV 149
           +D+ YA ++L P   Y     L +       + +  FF K L+ SD + +GG     F +
Sbjct: 406 SDDSYAMISLFPGDCYVTHRPLPAARDPVGGQREFCFFDKKLSPSDAAANGGGSGALFVI 465

Query: 150 PR-RAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG-----QPKRHLLTTGWSL 203
           P+  AAE + P +         +L   +L    W F H +       +   H L  GWS 
Sbjct: 466 PKPSAAEHVLPRI--------PDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTLAAGWSA 517

Query: 204 FVSGKRLFAGDSVLFIRDE-KQQLLLGIRRANRQPANLSSSVLSSDSMHIGI----LAAA 258
           FV  KRL  GD+V+F+R     + ++G+R   R+P            M +GI    +A A
Sbjct: 518 FVKAKRLCVGDTVIFMRRRPGGEPIVGVR---RKPHG---------GMLVGIPDKHVADA 565

Query: 259 AHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM 318
              A   + F V    R    E   PLA             G R R++   ++   R   
Sbjct: 566 WLDAVGTAEFVV----RREEVEGSPPLAP------------GTRVRLLMNPDDVRRRSQP 609

Query: 319 GTITGISDLDPVRWKNSQWRNLQVGWDEST--AGEKRNRVSIWEIEPV 364
                + D+       S+WR L+V WD  +  A     RV+ W+++PV
Sbjct: 610 PVYGTVRDVH----SRSKWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 653


>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
          Length = 407

 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 161/376 (42%), Gaps = 52/376 (13%)

Query: 12  SNSGEGGGGEKKTINTELWHACAGP-LVNLPAAGTHVVYFPQGHSEQVA---ASMKKDID 67
           ++ G+G       ++  +W ACA P    LPA G+ V YF  GH+ Q     A + + + 
Sbjct: 9   ADDGDG------IVDRAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQL- 61

Query: 68  GQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKP 127
             +P     P   LC +  V L AD  T+E YA++TL PV  +D   L  +     +   
Sbjct: 62  -AVPG----PRVFLCTVAAVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAA 116

Query: 128 ---QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
              Q  +F KTL  SD      FS P   A+ +FPPL  +     Q L+ +DLH +  TF
Sbjct: 117 GGQQLRYFVKTLMISDFDFRIRFSAPMADAKGVFPPLVDAKA--VQPLLVKDLHGSPMTF 174

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQ-----QLLLGIRRANRQPAN 239
            +  +G  KR  L   W  F        GDSV+F+R         +L +G+RR       
Sbjct: 175 DYGRKG--KRVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERP 232

Query: 240 LSSSVLSS------DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVH 293
           L +++          +     + AAA  AA    FTV Y  R    EFVVP     + + 
Sbjct: 233 LRNTMRRYRPPTPPQAAVQEAVLAAAGHAAAGERFTVAYRSRQDGDEFVVPREAVEEGLR 292

Query: 294 SNQISLGMRFRMMFETEES-----GTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDEST 348
           +   SL      ++  E+      G R   G +T I+           WRNL++ WD ++
Sbjct: 293 ARLTSLA-EVEFVWAVEDGAPPIVGPR---GKVTAIA-------TGQLWRNLEIVWDGNS 341

Query: 349 AGEKRNRVSIWEIEPV 364
             E     + W++ PV
Sbjct: 342 --EMDMSANFWQVRPV 355


>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
 gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
          Length = 304

 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 102/172 (59%), Gaps = 12/172 (6%)

Query: 823 PQTYLNGAATQTDYLDTSSSTTSVCLSQNDVHLQQNN-SLSYNPQSTLRDASQDGEVP-V 880
           PQ  +N  A QTD L+TSSS TS+C S+ D  + Q   S ++N     +DA  D E+  V
Sbjct: 12  PQNCIN-HALQTDNLETSSSATSLCPSRTDGLVHQGFPSSNFNQHQMFKDALPDVEMEGV 70

Query: 881 DPRSNIPYGANIDGPLGSMNPDPLLTKGMMGLGKD---FSNNISSGAMLANYENSKDAQQ 937
           DP ++  +G N D  LG     P+ T+ ++    D   + N+IS+     NY   KDA Q
Sbjct: 71  DPSNSGLFGINNDNLLGF----PIETEDLLINALDSVKYQNHISTDVE-NNYPMQKDALQ 125

Query: 938 ELSSSIVSQSFGVPDMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           E+S+S+VSQSFG  DMAFNSIDS IND +FLN   W   P   QRMRT+TKV
Sbjct: 126 EISTSMVSQSFGQSDMAFNSIDSAINDGAFLNKNSWPAAPLL-QRMRTFTKV 176


>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 467

 Score =  102 bits (253), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/112 (43%), Positives = 72/112 (64%), Gaps = 3/112 (2%)

Query: 252 IGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEE 311
            G+LA+A+HA   NS F V+Y PR S S+++V + KY+ A  +   ++GMRFRM FE E+
Sbjct: 1   FGVLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTG-FTVGMRFRMNFEAED 59

Query: 312 SGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTA-GEKRNRVSIWEIE 362
              +++ GTI G  D  P +W  S+W++L+V WD+S A      RVS WEI+
Sbjct: 60  VPVKKFFGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEID 110


>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
 gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
          Length = 317

 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 73/129 (56%), Gaps = 16/129 (12%)

Query: 15  GEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYP 74
            E  GG+KK IN  LW  C GPL+ LPA G+ VVYFPQGH+EQV AS +K+ D  IP   
Sbjct: 3   AEMEGGDKKAINQALWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQKEADFDIPIS- 61

Query: 75  NLPSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEFFCK 134
                         LHAD E DEV+AQMTLQP  S   +  L  D  +++ +     F +
Sbjct: 62  -------------HLHADQENDEVFAQMTLQPF-SQTADPFLLPDFGIQTKQTIVS-FSR 106

Query: 135 TLTASDTST 143
           TLT+S  S+
Sbjct: 107 TLTSSGESS 115


>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
          Length = 541

 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 25  INTELWHACAGPLVN-LPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           +  ++W ACA P    LP  G+ V YFP GH+EQ  +  ++ + G+I          LC 
Sbjct: 253 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 303

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF---FCKTLTASD 140
           + +V L A   T+E  A ++L P+ + D    L++         Q++    F K LT +D
Sbjct: 304 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 362

Query: 141 TSTHGGFSVPRR-AAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
             T   F VP+  AA  + P +  +   P   L  +DL    W F + ++   +  +   
Sbjct: 363 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 416

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW  F +   L  GD+ +F+R    ++ + +RR   +PA  S          +  +  A 
Sbjct: 417 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPAPFS----------VEEVIEAV 466

Query: 260 HAAANNSPFTVFYNPRASPSEFVVP 284
             AA   PF V Y  R    EFVVP
Sbjct: 467 WRAARREPFEVSYCSRQDGDEFVVP 491


>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
 gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
          Length = 524

 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 25  INTELWHACAGPLVN-LPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           +  ++W ACA P    LP  G+ V YFP GH+EQ  +  ++ + G+I          LC 
Sbjct: 236 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 286

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF---FCKTLTASD 140
           + +V L A   T+E  A ++L P+ + D    L++         Q++    F K LT +D
Sbjct: 287 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 345

Query: 141 TSTHGGFSVPRR-AAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
             T   F VP+  AA  + P +  +   P   L  +DL    W F + ++   +  +   
Sbjct: 346 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 399

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW  F +   L  GD+ +F+R    ++ + +RR   +PA  S          +  +  A 
Sbjct: 400 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPAPFS----------VEEVIEAV 449

Query: 260 HAAANNSPFTVFYNPRASPSEFVVP 284
             AA   PF V Y  R    EFVVP
Sbjct: 450 WRAARREPFEVSYCLRQDGDEFVVP 474


>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
 gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
          Length = 585

 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 118/265 (44%), Gaps = 31/265 (11%)

Query: 25  INTELWHACAGPLVN-LPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCI 83
           +  ++W ACA P    LP  G+ V YFP GH+EQ  +  ++ + G+I          LC 
Sbjct: 276 VTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---------FLCK 326

Query: 84  LLNVTLHADTETDEVYAQMTLQPVPSYDREALLRSDLALKSNKPQTEF---FCKTLTASD 140
           + +V L A   T+E  A ++L P+ + D    L++         Q++    F K LT +D
Sbjct: 327 VTDVRLGA-AATNEALATISLVPIAADDHAFQLQAPADPDPAPAQSQSLVSFVKPLTYTD 385

Query: 141 TSTHGGFSVPRR-AAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTT 199
             T   F VP+  AA  + P +  +   P   L  +DL    W F + ++   +  +   
Sbjct: 386 V-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKDLSGKEWAFNYTWKAHTR--MFRN 439

Query: 200 GWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAA 259
           GW  F +   L  GD+ +F+R    ++ + +RR   +PA  S          +  +  A 
Sbjct: 440 GWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRTRNRPAPFS----------VEEVIEAV 489

Query: 260 HAAANNSPFTVFYNPRASPSEFVVP 284
             AA   PF V Y  R    EFVVP
Sbjct: 490 WRAARREPFEVSYCLRQDGDEFVVP 514


>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
          Length = 429

 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 73/111 (65%), Gaps = 2/111 (1%)

Query: 254 ILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG 313
           +L+A A++  N S F + +NPR   SEF+VP  K+ K+++ +  S+G RF++  E E++ 
Sbjct: 1   MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYH-FSVGTRFKVGCENEDAN 59

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            R + G I GIS++DP+ W  S+W++L + WD +T    +NRVS W+IE V
Sbjct: 60  ERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGV 109


>gi|359473594|ref|XP_002273120.2| PREDICTED: uncharacterized protein LOC100266020 [Vitis vinifera]
          Length = 1203

 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 56/65 (86%), Gaps = 1/65 (1%)

Query: 219 IRDEKQQ-LLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRAS 277
           ++D +Q+ LL G+RRANRQ  +L SSVLS+DS+HIG+LAA +HAAAN SPFT+FYNPRA 
Sbjct: 496 LKDREQKPLLFGVRRANRQQTSLPSSVLSTDSLHIGVLAATSHAAANRSPFTIFYNPRAC 555

Query: 278 PSEFV 282
           PS+F+
Sbjct: 556 PSKFI 560


>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
          Length = 377

 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/133 (44%), Positives = 76/133 (57%), Gaps = 24/133 (18%)

Query: 126 KPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWT-F 184
           K  +  FCKTLTASDTSTHGGFSVPRRAAE  FPPL+F                  W+ F
Sbjct: 117 KRMSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRF 158

Query: 185 RHIYRGQPKRHLL----TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANL 240
           +   R   + +++    TTG S FV+ K+L + D+VLF+R +  +L LG+RRA  Q  N 
Sbjct: 159 KECKRTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVRRAA-QLKNG 217

Query: 241 SSSVLSSDSMHIG 253
           S+  L   S  IG
Sbjct: 218 SAFQLFITSAQIG 230


>gi|147765452|emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
          Length = 893

 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 57/70 (81%), Gaps = 2/70 (2%)

Query: 93  TETDEVYAQMTLQPV-PSYDREALLRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPR 151
            +TDEVYAQMTLQP+ P   ++A L ++L + S +P + +FCKTL ASDTSTHGGFSVPR
Sbjct: 374 VKTDEVYAQMTLQPLSPQEQKDAYLPAELGVPSKQP-SNYFCKTLIASDTSTHGGFSVPR 432

Query: 152 RAAEKIFPPL 161
           RAAEK+FPPL
Sbjct: 433 RAAEKVFPPL 442


>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
          Length = 528

 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 71/135 (52%), Gaps = 9/135 (6%)

Query: 255 LAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG- 313
           +  +A  AA   PF V Y PRAS  EF V  A+   A    Q S GMRF+M FETE+S  
Sbjct: 54  VVESATLAAAGQPFEVVYYPRASTPEFCVK-AQAVDAALRVQWSAGMRFKMAFETEDSSR 112

Query: 314 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA------- 366
              +MGTI+ +   DPV W NS WR LQV WDE    +   RVS W +E V++       
Sbjct: 113 ISWFMGTISSVQLADPVCWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVEVVSSMPPIQLT 172

Query: 367 PFFICPPPFFRSKHP 381
           PF +       ++HP
Sbjct: 173 PFTLPKKKLRVTQHP 187


>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
          Length = 721

 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 129/309 (41%), Gaps = 44/309 (14%)

Query: 77  PSKLLCILLNVTLHADTETDEVYAQMTLQPVPSYD---REALLRSDLALKSNKPQTEFFC 133
           P   LC +  V L AD  T+E YA +TL PV  +D            A    + Q  +F 
Sbjct: 26  PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGGQQQQLRYFV 85

Query: 134 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPK 193
           KTL +SD      F+VP   A+ +FPPL  +     Q L+ +DL  +  TF +   G   
Sbjct: 86  KTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKA--VQPLIVKDLQGSPMTFDYGRNGN-- 141

Query: 194 RHLLTTGWSLFVSGKRLFAGDSVLFI-RDEKQQLLLGIR-----------RANRQPANLS 241
           R  L   W  F        GDSV+F+ R +  +L +G+R           R +R P  L 
Sbjct: 142 RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQRTLDKPLRTRRSRPPTPLP 201

Query: 242 SSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGM 301
            +V          + AAA  AA    FT  Y  R    EFVVP     + V    + L  
Sbjct: 202 VAVQE--------VIAAAGRAAAGEQFTATYRSRQDGDEFVVP-----REVVEEGLRLRS 248

Query: 302 RFRMMFETE-----ESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRV 356
           RF    E E     E G    +G    I+ +    W    WR++++GW   T G + N+ 
Sbjct: 249 RFTPEMEVEFVWALEDGAPPSVGPHGKITAIHDTTW---MWRSVEIGW---TGGSEMNKY 302

Query: 357 S-IWEIEPV 364
           +  W++  V
Sbjct: 303 ANFWQVRLV 311



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 134/301 (44%), Gaps = 41/301 (13%)

Query: 76  LPSKL-LCILLNVTLHADTETDEVYAQMTLQPVPSYDREALLR----SDLALKSNKPQTE 130
           LP ++ LC +  V L  D   +E++A M+L PV    R+  ++    +D    S + QT 
Sbjct: 343 LPGRVFLCKVTAVRL--DATRNELFATMSLIPVA---RDQAIQPQAPADPGPSSPQVQTT 397

Query: 131 F--FCKTLTASD-TSTHGGFSVPRR-AAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRH 186
              F K LT +D       F VP+R  A  + P L  +   P   L  +D+H   W   +
Sbjct: 398 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 454

Query: 187 IYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD-EKQQLLLGIRRANRQPANLSSSVL 245
            ++     H+L++GW  F +  RL  GD+V+F+R  +  +  +G+RR            L
Sbjct: 455 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRT-----------L 501

Query: 246 SSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRM 305
             + + +  +  A   AA   PF V Y  R    EFVVP    + A+ + + + GM    
Sbjct: 502 KPEPVSVDEVIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRA-KFTPGMVVNF 560

Query: 306 MFETEESGTRRY--MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           ++  EE         G +  I +     +  S WR +QV W  S AG  R  V+ W+I  
Sbjct: 561 VWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEW-PSCAGMNRY-VNFWQIRE 613

Query: 364 V 364
           V
Sbjct: 614 V 614


>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
          Length = 120

 Score = 88.2 bits (217), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 1/63 (1%)

Query: 301 MRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWE 360
           MRFRM FETE++  RR  G I GISD+DPVRW  S+WR L V WD+  A  +RNRVS WE
Sbjct: 1   MRFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDDIEAA-RRNRVSPWE 59

Query: 361 IEP 363
           IEP
Sbjct: 60  IEP 62


>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 186

 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 1/77 (1%)

Query: 28  ELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNV 87
           ELWHACA PLV  P  G  V YFPQGH EQV ASM +    Q+  Y +LP KLLC ++N+
Sbjct: 21  ELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLY-DLPPKLLCRVINI 79

Query: 88  TLHADTETDEVYAQMTL 104
            L A+ + D+VYAQ+ L
Sbjct: 80  ELKAEADIDKVYAQVIL 96


>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
          Length = 209

 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 55/75 (73%), Gaps = 4/75 (5%)

Query: 916 FSNNISSGAMLANYENSKDAQQELSSSIVSQSFGVPDMAFNSIDSTINDSSFLNGGPWAP 975
           + N+IS+  +  +Y   KDAQQE+SSS+VSQSFG  DMAFNSIDSTIND  FLN   W  
Sbjct: 9   YENHIST-EIDNSYRIPKDAQQEISSSMVSQSFGASDMAFNSIDSTINDGGFLNRSSW-- 65

Query: 976 PPQFP-QRMRTYTKV 989
           PP  P +RMRT+TKV
Sbjct: 66  PPAAPLKRMRTFTKV 80


>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
 gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
          Length = 354

 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 29/238 (12%)

Query: 132 FCKTLTASD-TSTHGGFSVPRR-AAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYR 189
           F K LT +D       F VP+R  A  + P L  +   P   L  +D+H   W   + ++
Sbjct: 34  FVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWK 90

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD-EKQQLLLGIRRANRQPANLSSSVLSSD 248
                H+L++GW  F +  RL  GD+V+F+R  +  +  +G+RR            L  +
Sbjct: 91  EY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRT-----------LKPE 137

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            + +  +  A   AA   PF V Y  R    EFVVP    + A+ + + + GM    ++ 
Sbjct: 138 PVSVDEVIEAVWRAARLEPFEVTYLSRQDGDEFVVPCGIVHNALRA-KFTPGMVVNFVWA 196

Query: 309 TEESGTRRY--MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
            EE         G +  I +     +  S WR +QV W  S AG  R  V+ W+I  V
Sbjct: 197 VEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEW-PSCAGMNRY-VNFWQIREV 247


>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
 gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
 gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
 gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
          Length = 109

 Score = 80.9 bits (198), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 6/79 (7%)

Query: 271 FYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRR-----YMGTITGIS 325
           F   RAS SEF +P  K+ K++     S GMRF+M FETE++  RR     Y G ITG+S
Sbjct: 23  FLPCRASSSEFTIPFNKFLKSL-DQSFSSGMRFKMCFETEDAAERRFAIHGYTGIITGVS 81

Query: 326 DLDPVRWKNSQWRNLQVGW 344
           +LDP RW  S+W+ L V W
Sbjct: 82  ELDPARWPGSKWKCLLVSW 100


>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
          Length = 690

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 1/105 (0%)

Query: 128 QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHI 187
           +   F K +T SD        +P++ AE+ FP LD ++  P Q L   D+    W FR+ 
Sbjct: 195 REHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFEDVSGKHWRFRYS 253

Query: 188 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           Y    + ++ T GWS F+ GK+L AGD+V F R   Q+L +  RR
Sbjct: 254 YWNSSQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFRR 298



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 1/105 (0%)

Query: 128 QTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHI 187
           +   F K +T SD        +P++ AE+ FP LD ++  P Q L   D+    W FR+ 
Sbjct: 68  REHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVPCQTLSFEDVSGKHWRFRYS 126

Query: 188 YRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
           Y    + ++ T  WS F+ GK+L AGD+V F R   Q+L +  RR
Sbjct: 127 YWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYIDFRR 171


>gi|361069823|gb|AEW09223.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171017|gb|AFG68785.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171018|gb|AFG68786.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171019|gb|AFG68787.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171020|gb|AFG68788.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171021|gb|AFG68789.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171022|gb|AFG68790.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171023|gb|AFG68791.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171024|gb|AFG68792.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171025|gb|AFG68793.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171026|gb|AFG68794.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171027|gb|AFG68795.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171028|gb|AFG68796.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171029|gb|AFG68797.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171030|gb|AFG68798.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171031|gb|AFG68799.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
 gi|383171032|gb|AFG68800.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
          Length = 89

 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 4/89 (4%)

Query: 1  MKTPANTAGAASNSGEGGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAA 60
          + +P   +    NS E     K +I  ELWHACAGPL++LP  GT VVYFPQGH EQ + 
Sbjct: 5  LNSPDEYSNGRLNSSEELALSKSSICMELWHACAGPLISLPRKGTLVVYFPQGHLEQAST 64

Query: 61 SMKKDIDGQIPNYPNLPSKLLCILLNVTL 89
          S+K+    Q+  Y  LP ++ C +LNV L
Sbjct: 65 SLKQQ---QMRPY-ELPPQIFCRVLNVNL 89


>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
 gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
          Length = 91

 Score = 77.8 bits (190), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/61 (49%), Positives = 42/61 (68%)

Query: 158 FPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVL 217
           F  LD++ +PP + ++A+D+H   W FRHIYRG P+RHLL TGWS FV+ K  + G  + 
Sbjct: 10  FSRLDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLC 69

Query: 218 F 218
           F
Sbjct: 70  F 70


>gi|242050918|ref|XP_002463203.1| hypothetical protein SORBIDRAFT_02g039703 [Sorghum bicolor]
 gi|241926580|gb|EER99724.1| hypothetical protein SORBIDRAFT_02g039703 [Sorghum bicolor]
          Length = 74

 Score = 76.6 bits (187), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/69 (60%), Positives = 55/69 (79%), Gaps = 3/69 (4%)

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           SDSMHI ++AAAAH A+ NS FT+FYN RA+PSEFV+ LAKY +A++  +I +GM FRM+
Sbjct: 1   SDSMHISLIAAAAHVASANSWFTIFYNTRANPSEFVISLAKYVEALYHTRIYVGMHFRML 60

Query: 307 F---ETEES 312
           F   +TEES
Sbjct: 61  FLRQQTEES 69


>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score = 75.5 bits (184), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 4/146 (2%)

Query: 220 RDEKQQLLLGIRRANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPS 279
           R+   +L +G+RR  R   N   S  SS  +    +A AA  AA   PF V Y PR   S
Sbjct: 3   RNSNSELFIGVRRDARWNRNGERS--SSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSS 60

Query: 280 EFVVPLAKYYKAVHSNQISLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWKNSQWR 338
           +FVV  A+  +   S   + GMR +M  ETE+S  T  + GT++  + +D   W+ S WR
Sbjct: 61  DFVVK-AEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWR 119

Query: 339 NLQVGWDESTAGEKRNRVSIWEIEPV 364
            LQV WDE    +   RVS W++E V
Sbjct: 120 MLQVTWDEPEVLQNVMRVSPWQVELV 145


>gi|298111072|gb|ADB96354.2| auxin response factor 7 [Arabidopsis thaliana]
          Length = 303

 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 123 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 169

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 170 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 217

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 218 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 267

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 268 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 302


>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
          Length = 180

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 2/78 (2%)

Query: 13 NSGEGGGG-EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIP 71
          N GE   G E + +  ELW ACAGPLV +P  G  V YFPQGH EQ+  S  ++++ QIP
Sbjct: 7  NPGESRKGLEGEDLYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIP 66

Query: 72 NYPNLPSKLLCILLNVTL 89
          ++ +LP K+LC ++N+ L
Sbjct: 67 HF-DLPPKILCRVVNIRL 83


>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
          Length = 381

 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 80  SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 126

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 127 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 174

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 175 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 224

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 225 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 259


>gi|414868950|tpg|DAA47507.1| TPA: hypothetical protein ZEAMMB73_035781, partial [Zea mays]
          Length = 78

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 36/42 (85%)

Query: 20 GEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAAS 61
          GE++ +N+ELWHACAGPLV+LP  G+ VVYFPQGHSEQV  S
Sbjct: 17 GEQRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVGHS 58


>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
          Length = 1165

 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 107/218 (49%), Gaps = 41/218 (18%)

Query: 775  AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
            +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 864  SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 910

Query: 835  DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
            D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 911  DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 958

Query: 894  GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                   PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 959  N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 1008

Query: 952  DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            ++   S D  +ND+  L GG W   P   QRMRTYTKV
Sbjct: 1009 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTKV 1043


>gi|222066052|emb|CAX21481.1| ARF8 protein [Olea europaea]
          Length = 56

 Score = 73.6 bits (179), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/54 (79%), Positives = 49/54 (90%)

Query: 240 LSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVH 293
           + SSVLSSDSMHIG+LAAAAHAAA NS F +FYNPRASPSEFV+PLAKY KA++
Sbjct: 1   MPSSVLSSDSMHIGLLAAAAHAAATNSRFCIFYNPRASPSEFVIPLAKYAKALY 54


>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 269

 Score = 73.2 bits (178), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/117 (38%), Positives = 58/117 (49%), Gaps = 2/117 (1%)

Query: 122 LKSNKPQTE-FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDN 180
           LK   P  E  F K +T SD        +P++ AE+ FP LD S   P Q L   D+   
Sbjct: 154 LKECAPTREHLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGK 212

Query: 181 IWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQP 237
            W FR+ Y    + ++LT GWS FV  K+L AGD V F R   Q+L +  RR    P
Sbjct: 213 HWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFRRKQVIP 269


>gi|298111074|gb|ADB96355.2| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308061|gb|ADL70343.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 304

 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 106/217 (48%), Gaps = 41/217 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 126 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 172

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 173 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 220

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 221 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 270

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTK 988
           ++   S D  +ND+  L GG W   P   QRMRTYTK
Sbjct: 271 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTK 304


>gi|304308053|gb|ADL70339.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308057|gb|ADL70341.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308059|gb|ADL70342.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 301

 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 106/217 (48%), Gaps = 41/217 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 123 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 169

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 170 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 217

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 218 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 267

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTK 988
           ++   S D  +ND+  L GG W   P   QRMRTYTK
Sbjct: 268 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTK 301


>gi|304308063|gb|ADL70344.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308075|gb|ADL70350.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 299

 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 106/217 (48%), Gaps = 41/217 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 121 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 167

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 168 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 215

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 216 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 265

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTK 988
           ++   S D  +ND+  L GG W   P   QRMRTYTK
Sbjct: 266 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTK 299


>gi|284811235|gb|ADB96356.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|284811237|gb|ADB96357.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308055|gb|ADL70340.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308065|gb|ADL70345.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308067|gb|ADL70346.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308069|gb|ADL70347.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308071|gb|ADL70348.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308073|gb|ADL70349.1| auxin response factor 7 [Arabidopsis thaliana]
 gi|304308077|gb|ADL70351.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 300

 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 106/217 (48%), Gaps = 41/217 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 122 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 168

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 169 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 216

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 217 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 266

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTK 988
           ++   S D  +ND+  L GG W   P   QRMRTYTK
Sbjct: 267 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRTYTK 300


>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 189

 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 50/216 (23%)

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           ++ M  G++A+  +A      F V Y PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +  
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIP 90

Query: 367 PFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFGVKDSQSLPGLSLVQWMNMQ 426
              I      + KH RQ ++  +   N+      WI  + G +   S   +S++++    
Sbjct: 91  SSDISQSSLKKKKHWRQLNEIGATSSNL------WICQEIGQRSMNS--PISVLEF---- 138

Query: 427 QNPSLANAMQSSYMHSLPGSILQNLNGGLSQMPQQN 462
              S  NA++ S     P  +L  LN  L  +P +N
Sbjct: 139 ---SYPNAVEDS---KFPSGLL--LNHSLLAIPNEN 166


>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 203

 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 36/160 (22%)

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
           + M  G++A+  +A      F V Y PR                             M F
Sbjct: 1   NCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQF 31

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           E ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +   
Sbjct: 32  EGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS 90

Query: 368 FFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFG 407
             I      + KH RQ ++  +   N+      WI  + G
Sbjct: 91  SDISQSSLKKKKHWRQLNEIGATSSNL------WICQEIG 124


>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
          Length = 1123

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 121/284 (42%), Gaps = 60/284 (21%)

Query: 712  HIINPVSTAGNSALTGAAGVGQSVITDDNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIG 771
            H  N +     S +T  A  G +    D PSCSTSPSTNN Q +  P   +R    A + 
Sbjct: 773  HAFNQLQNHHKSPITIKALSGGT--EGDAPSCSTSPSTNNFQ-VSPPNFLTRNQGQAILV 829

Query: 772  EEVAQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAA 831
            +E     S   N S              + H+        +SK +               
Sbjct: 830  DESVVDPSQEQNKSECR-----------IKHELVFSKGSELSKYK--------------G 864

Query: 832  TQTDYLDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGA- 890
              T+ L+ +SSTTS  L  +  +             +L     DG+V    R+ +P  A 
Sbjct: 865  NNTENLEAASSTTSYGLDSSGFNF------------SLPALCVDGDVQSHSRNILPSAAN 912

Query: 891  NIDGPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELS-SSIVSQSF 948
            NIDG    +NPD LL++     GKD  N      + + + N+ +D + ELS + I SQ F
Sbjct: 913  NIDG----LNPDALLSRDYDS-GKDIQN------LFSPFGNAPRDIETELSDAGINSQQF 961

Query: 949  GVPDMAFN---SIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
            GVP+M++    + D  +ND+  LN   W       QRMRTYTKV
Sbjct: 962  GVPNMSYKPRCANDLAVNDNGILNNNAWT---NQTQRMRTYTKV 1002


>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
          Length = 431

 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 34/52 (65%)

Query: 316 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           R  G ITGI D+DP+RW +S+WR L V WDE    E R RVS WEIEP   P
Sbjct: 1   RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLP 52


>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 216

 Score = 69.7 bits (169), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 7/88 (7%)

Query: 276 ASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNS 335
           A+ +EFV+P  KY  ++  N I +G RF M FE  +S   R  G + G+ DLDP RW NS
Sbjct: 97  ATHAEFVIPYEKYITSIR-NPICIGTRFIMRFEMNDS-PERCAGVVAGVYDLDPYRWPNS 154

Query: 336 QWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           +W +       S   + + RVS+WEI+P
Sbjct: 155 KWCD-----GMSLVSDHQERVSLWEIDP 177


>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 173

 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 30/149 (20%)

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           ++ M  G++A+  +A      F V Y PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +  
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIP 90

Query: 367 PFFICPPPFFRSKHPRQADDDASDLDNVF 395
              I      + KH RQ ++  +   N++
Sbjct: 91  SSDISQSSLKKKKHWRQLNEIGATSSNLW 119


>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 183

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 30/148 (20%)

Query: 248 DSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMF 307
           + M  G++A+  +A      F V Y PR                             M F
Sbjct: 1   NCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQF 31

Query: 308 ETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAP 367
           E ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +   
Sbjct: 32  EGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPS 90

Query: 368 FFICPPPFFRSKHPRQADDDASDLDNVF 395
             I      + KH RQ ++  +   N++
Sbjct: 91  SDISQSSLKKKKHWRQLNEIGATSSNLW 118


>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 187

 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 30/147 (20%)

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            M  G++A+  +A      F V Y PR                             M FE
Sbjct: 1   CMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFE 31

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +    
Sbjct: 32  GKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS 90

Query: 369 FICPPPFFRSKHPRQADDDASDLDNVF 395
            I      + KH RQ ++  +   N++
Sbjct: 91  DISQSSLKKKKHWRQLNEIGATSSNLW 117


>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 176

 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 30/149 (20%)

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           ++ M  G++A+  +A      F V Y PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +  
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIP 90

Query: 367 PFFICPPPFFRSKHPRQADDDASDLDNVF 395
              I      + KH RQ ++  +   N++
Sbjct: 91  SSNISQSSLKKKKHWRQLNEIGAISSNLW 119


>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 188

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 30/147 (20%)

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            M  G++A+  +A      F V Y PR                             M FE
Sbjct: 1   CMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFE 31

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
             +   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +    
Sbjct: 32  GNDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS 90

Query: 369 FICPPPFFRSKHPRQADDDASDLDNVF 395
            I      + KH RQ ++  +   N++
Sbjct: 91  DISQSSLKKKKHWRQLNEIGATSSNLW 117


>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 188

 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 30/147 (20%)

Query: 249 SMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMMFE 308
            M  G++A+  +A      F V Y PR                             M FE
Sbjct: 1   CMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQFE 31

Query: 309 TEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPF 368
            ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +    
Sbjct: 32  GKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSS 90

Query: 369 FICPPPFFRSKHPRQADDDASDLDNVF 395
            I      + KH RQ ++  +   N++
Sbjct: 91  NISQSSLKKKKHWRQLNEIGAISSNLW 117


>gi|356537126|ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
           max]
          Length = 337

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 60/120 (50%), Gaps = 4/120 (3%)

Query: 132 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMA--RDLHDNIWTFRHIYR 189
           F K LT SD        +P++ AEK FP    S     + L+    D     W FR+ Y 
Sbjct: 73  FEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSYW 132

Query: 190 GQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD--EKQQLLLGIRRANRQPANLSSSVLSS 247
              + ++LT GWS +V  KRL AGD VLF R   + Q+L +G RR  +  A L  + +SS
Sbjct: 133 NSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVSS 192


>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 168

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RM FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE 
Sbjct: 21  RMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH 79

Query: 364 VTAPFFICPPPFFRSKHPRQADDDASDLDNVF 395
           +     I      + KH RQ ++  +   N++
Sbjct: 80  LIPSLDISQSSLKKKKHWRQLNEIGATSSNLW 111


>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 227

 Score = 67.8 bits (164), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 116 LRSDLALKSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMAR 175
           L  D   +S+  +   F K +T SD        +P++ AE+ FP LD S   P Q L   
Sbjct: 115 LPRDEPRESSPTREHLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFE 173

Query: 176 DLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLL 228
           D+    W FR+ Y    + ++LT GWS FV  K+L AGD V F R    +L +
Sbjct: 174 DVSGKHWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226


>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 42/185 (22%)

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           ++ M  G++A+  +A      F V Y PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE +  
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIP 90

Query: 367 PFFICPPPFFRSKHPRQADDDASDLDNVF------KRTM------PWIGDDFGVKDSQSL 414
              I      + KH  Q ++  +   N++      +R+M      P       ++DS+ L
Sbjct: 91  SSDISQSSLKKKKHWLQLNEIGATSSNLWTCQEIGQRSMNSPISVPEFSYPNAIEDSKFL 150

Query: 415 PGLSL 419
            GL L
Sbjct: 151 SGLLL 155


>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 30/149 (20%)

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           ++ M  G++A+  +A      F V Y PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+V  W+IE +  
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIP 90

Query: 367 PFFICPPPFFRSKHPRQADDDASDLDNVF 395
              I      + KH RQ ++  +   N++
Sbjct: 91  SSDISQSSLKKKKHWRQLNEIGATSSNLW 119


>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 190

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 69/149 (46%), Gaps = 30/149 (20%)

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           ++ M  G++A+  +A      F V Y PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE ++   +RY GTI G++D+ P  WK+S+W++L+V WDE +   + N+VS W+IE +  
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHLIP 90

Query: 367 PFFICPPPFFRSKHPRQADDDASDLDNVF 395
              I      + KH RQ ++  +   N++
Sbjct: 91  SSDISQSSLKKEKHWRQLNEIGATSSNLW 119


>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 175

 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 30/149 (20%)

Query: 247 SDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLGMRFRMM 306
           ++ M  G++A+  +A      F V Y PR                             M 
Sbjct: 1   ANCMQHGVIASVVNAFKTKCMFNVVYKPR-----------------------------MQ 31

Query: 307 FETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTA 366
           FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+V  W+IE +  
Sbjct: 32  FEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIP 90

Query: 367 PFFICPPPFFRSKHPRQADDDASDLDNVF 395
              I      + KH RQ ++  +   N++
Sbjct: 91  SSDISQSSLKKKKHWRQLNEIGATSSNLW 119


>gi|222623484|gb|EEE57616.1| hypothetical protein OsJ_08008 [Oryza sativa Japonica Group]
          Length = 140

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 6/68 (8%)

Query: 23 KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVA------ASMKKDIDGQIPNYPNL 76
          K +N ELWHAC+ PLV LP+ GT VVYFPQGHSEQV+       S+    + Q P +  L
Sbjct: 25 KCLNLELWHACSSPLVCLPSVGTRVVYFPQGHSEQVSWLSAMGCSLLSRGNHQRPWWIAL 84

Query: 77 PSKLLCIL 84
          PS   C  
Sbjct: 85 PSSCWCFF 92


>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
 gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
          Length = 261

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            F K +T SD        +P++ AE+ FP LD S       L   D+   +W FR+ Y  
Sbjct: 157 LFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYWN 215

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
             + ++LT GWS FV  K+L AGD V F R   Q+L +  RR
Sbjct: 216 SSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 257


>gi|413926488|gb|AFW66420.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
          Length = 94

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/38 (73%), Positives = 33/38 (86%)

Query: 21 EKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQV 58
          E K +N+ELWHACAGPLV+LP+ G+ VVYFPQGH EQV
Sbjct: 23 EHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQV 60


>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
 gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
          Length = 262

 Score = 67.0 bits (162), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/102 (37%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            F K +T SD        +P++ AE+ FP LD S       L   D+   +W FR+ Y  
Sbjct: 158 LFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYWN 216

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRR 232
             + ++LT GWS FV  K+L AGD V F R   Q+L +  RR
Sbjct: 217 SSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 258


>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 180

 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 55/92 (59%), Gaps = 1/92 (1%)

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RM FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE 
Sbjct: 22  RMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH 80

Query: 364 VTAPFFICPPPFFRSKHPRQADDDASDLDNVF 395
           +     I      + KH RQ ++  +   N++
Sbjct: 81  LIPSSDISQSSLKKKKHWRQLNEIGATSSNLW 112


>gi|304308189|gb|ADL70407.1| auxin response factor 13 [Arabidopsis thaliana]
          Length = 169

 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 58/104 (55%), Gaps = 7/104 (6%)

Query: 304 RMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEP 363
           RM FE ++   +RY GTI G++D+ P  WK+S+WR+L+V WDE +   + N+VS W+IE 
Sbjct: 8   RMQFEGKDFSEKRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH 66

Query: 364 VTAPFFICPPPFFRSKHPRQADDDASDLDNVFKRTMPWIGDDFG 407
           +     I      + KH RQ ++  +   N+      WI  + G
Sbjct: 67  LIPSSDISQSSLKKKKHWRQLNEIGATSSNL------WICQEIG 104


>gi|218191398|gb|EEC73825.1| hypothetical protein OsI_08552 [Oryza sativa Indica Group]
          Length = 113

 Score = 66.2 bits (160), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/37 (72%), Positives = 31/37 (83%)

Query: 23 KTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVA 59
          K +N ELWHAC+ PLV LP+ GT VVYFPQGHSEQV+
Sbjct: 25 KCLNLELWHACSSPLVCLPSVGTRVVYFPQGHSEQVS 61


>gi|194475604|gb|ACF74549.1| RAV [Nicotiana tabacum]
          Length = 385

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 123 KSNKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIW 182
           K NK + + F K +T SD        +P++ AEK FP L          L   DL+  +W
Sbjct: 189 KVNKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNTSKGVLLNFEDLNGKVW 247

Query: 183 TFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRD--EKQQLLLGIRRANRQP 237
            FR+ Y    + ++LT GWS FV  K L AGD V F R   E +QL +  +  N  P
Sbjct: 248 RFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGEDKQLYIDFKARNATP 304


>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
 gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 267 PFTVFYNPRAS-PSEFVVPLAKYYKAVHSNQISLGMRFRMMFETEESGTRRYM-GTITGI 324
           PF V Y PRA   S+FVV  A+  +A      + GMR +M  ETE+S    +  GT++G 
Sbjct: 24  PFDVVYYPRAGWYSDFVV-RAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGT 82

Query: 325 SDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPV 364
              D   W+ S WR LQ+ WDE    +   RVS W++E V
Sbjct: 83  GLPDSGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVEFV 122


>gi|353441048|gb|AEQ94108.1| putative auxin response transcription factor 1 [Elaeis guineensis]
          Length = 58

 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/57 (52%), Positives = 44/57 (77%), Gaps = 1/57 (1%)

Query: 48  VYFPQGHSEQVAASMKKDIDGQIPNYPNLPSKLLCILLNVTLHADTETDEVYAQMTL 104
           +YFPQGH EQ+ AS  + +D  +P + NLPSK+LC +++V L A+ +TDEVYAQ+T+
Sbjct: 1   IYFPQGHMEQLEASTNQGLDQHMPLF-NLPSKILCRVVHVQLRAEPDTDEVYAQITI 56


>gi|58982624|gb|AAW83473.1| RAV transcription factor [Capsicum annuum]
          Length = 399

 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 3/117 (2%)

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
           NK + + F K +T SD        +P++ AEK FP L          L   DL+  +W F
Sbjct: 206 NKVREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNNSKGVLLNFEDLNGKVWRF 264

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEK--QQLLLGIRRANRQPAN 239
           R+ Y    + ++LT GWS FV  K L AGD V F R     +QL +  +  N  P N
Sbjct: 265 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYIDFKARNMAPTN 321


>gi|33320073|gb|AAQ05799.1|AF478458_1 DNA binding protein Rav [Capsicum annuum]
          Length = 386

 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 56/117 (47%), Gaps = 3/117 (2%)

Query: 125 NKPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTF 184
           NK + + F K +T SD        +P++ AEK FP L          L   DL+  +W F
Sbjct: 193 NKVREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNNSKGVLLNFEDLNGKVWRF 251

Query: 185 RHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEK--QQLLLGIRRANRQPAN 239
           R+ Y    + ++LT GWS FV  K L AGD V F R     +QL +  +  N  P N
Sbjct: 252 RYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYIDFKARNMAPTN 308


>gi|49617493|gb|AAT67457.1| auxin response factor, partial [Trifolium repens]
          Length = 116

 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 8/111 (7%)

Query: 335 SQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICPPPF-FRSKHPR----QADDDAS 389
           S WR+++VGWDESTAGE++ RVS+WEIEP+T  F + P PF  R K P      + +   
Sbjct: 1   SHWRSVKVGWDESTAGERQPRVSLWEIEPLTT-FPMYPSPFPLRLKRPWPPGLPSFNGMK 59

Query: 390 DLDNVFKRTMPWIGD-DFGVKDSQSLPGLSLVQWMNMQQNPSLANAMQSSY 439
           D D      + W+ D D G+  S +  G+ L  WM  + +PS+ N     Y
Sbjct: 60  DDDFGMNSPLMWLRDTDRGLP-SLNFQGIGLNPWMQPRFDPSMLNMQTDMY 109


>gi|80750878|dbj|BAE48151.1| auxin response factor 3 [Arabidopsis thaliana]
          Length = 100

 Score = 62.8 bits (151), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/75 (48%), Positives = 44/75 (58%), Gaps = 12/75 (16%)

Query: 17  GGGGEKKTINTELWHACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDIDGQIPNYPNL 76
            GGG    +  ELWHACAGPL++LP  G+ V+YFPQGH EQ A      I G       L
Sbjct: 38  AGGG----VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQ-APDFSAAIYG-------L 85

Query: 77  PSKLLCILLNVTLHA 91
           P  + C +L+V LHA
Sbjct: 86  PPHVFCRILDVKLHA 100


>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
          Length = 476

 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 102/217 (47%), Gaps = 41/217 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 190 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 236

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S  S  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 237 DHQLEASASGNSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 284

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 285 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 334

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTK 988
           ++   S D  +ND+  L GG W   P   QRMR   +
Sbjct: 335 NVPAISNDLAVNDAGVLGGGLW---PAQTQRMRDVNR 368


>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
          Length = 591

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 102/218 (46%), Gaps = 41/218 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 305 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 351

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 352 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 399

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 400 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 449

Query: 952 DMAFNSIDSTINDSSFLNGGPWAPPPQFPQRMRTYTKV 989
           ++   S D  +ND+  L GG W   P   QR     KV
Sbjct: 450 NVPAISNDLAVNDAGVLGGGLW---PAQTQRNANLYKV 484


>gi|56966891|pdb|1WID|A Chain A, Solution Structure Of The B3 Dna-Binding Domain Of Rav1
          Length = 130

 Score = 60.8 bits (146), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/117 (34%), Positives = 56/117 (47%)

Query: 131 FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRG 190
            F K +T SD        +P+  AEK FP    ++      L   D++  +W FR+ Y  
Sbjct: 13  LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWN 72

Query: 191 QPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPANLSSSVLSS 247
             + ++LT GWS FV  K L AGD V F R   Q   L I   +R  ++L +S  SS
Sbjct: 73  SSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDLDASGPSS 129


>gi|388501264|gb|AFK38698.1| unknown [Medicago truncatula]
          Length = 302

 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 136 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRH 195
           LT SD        +P++ AE+ FP LD S +     L   D     W FR+ Y    + +
Sbjct: 65  LTPSDVGKLNRLVIPKQHAERYFP-LD-SEEIKGLLLSFEDESGKCWRFRYSYWNSSQSY 122

Query: 196 LLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPAN 239
           +LT GWS +V  KRL AGD VLF R       L I R  R  +N
Sbjct: 123 VLTKGWSRYVKDKRLDAGDVVLFQRHRIHPQRLFISRRRRHGSN 166


>gi|284811229|gb|ADB96353.1| auxin response factor 7 [Arabidopsis thaliana]
          Length = 292

 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 97/202 (48%), Gaps = 38/202 (18%)

Query: 775 AQSASALLNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQT 834
           +QS  A+L P A   M  + NLV+DL  KSD++    +   Q              A+ T
Sbjct: 120 SQSGPAILIPDAAIDM--SGNLVQDLYSKSDMRLKQELVGQQKS-----------KASLT 166

Query: 835 DY-LDTSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANID 893
           D+ L+ S+S TS  L   + + QQN      P   L     DG    D R+++  GAN+D
Sbjct: 167 DHQLEASASGTSYGLDGGENNRQQN---FLAPTFGL-----DG----DSRNSLLGGANVD 214

Query: 894 GPLGSMNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSSIV-SQSFGVP 951
                  PD LL++G     KD  N      ML+NY   + D   E+S+S V +QSFGVP
Sbjct: 215 N---GFVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAVRTQSFGVP 264

Query: 952 DMAFNSIDSTINDSSFLNGGPW 973
           ++   S D  +ND+  L GG W
Sbjct: 265 NVPAISNDLAVNDAGVLGGGLW 286


>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
          Length = 1100

 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 121/274 (44%), Gaps = 71/274 (25%)

Query: 725 LTGAAGV-GQSVITD--DNPSCSTSPSTNNCQRLIQPTINSRTHRSAGIGEEVAQSASAL 781
           L G  GV   S ITD  D PS STSPSTNNCQ +   T  +RT           QS    
Sbjct: 767 LVGGGGVKAYSGITDGGDAPSSSTSPSTNNCQ-ISSSTFLNRT-----------QSGPPT 814

Query: 782 LNPSALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDY---LD 838
           L P A   +  + +LV+DL  KSD++    ++  Q              A+ TD+   L+
Sbjct: 815 LMPDAAVDI--SGSLVQDLYSKSDMRLKHELAGPQKS-----------KASLTDHHHQLE 861

Query: 839 TSSSTTSVCLSQNDVHLQQNNSLSYNPQSTLRDASQDGEVPVDPRSNIPYGANIDGPLGS 898
            S+S TS       +     NSL                        +  GAN+D     
Sbjct: 862 ASASGTSFLAPTFGLDSDSRNSL------------------------LGGGANVD---NG 894

Query: 899 MNPDPLLTKGMMGLGKDFSNNISSGAMLANYEN-SKDAQQELSSS-IVSQSFGVPDMAFN 956
             PD LL++G     KD  N      ML+NY   + D   E+S+S I +QSFG+P++   
Sbjct: 895 FVPDTLLSRGYDSQ-KDLQN------MLSNYGGVTNDIGTEMSTSAIRTQSFGIPNVPAI 947

Query: 957 SIDSTINDS-SFLNGGPWAPPPQFPQRMRTYTKV 989
           S D  +ND+   L GG W   P   QRMRTYTKV
Sbjct: 948 SNDVAVNDAGGVLGGGLW---PTQTQRMRTYTKV 978


>gi|304308291|gb|ADL70458.1| auxin response factor 19 [Arabidopsis thaliana]
 gi|304308313|gb|ADL70469.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 317

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 48/236 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 119 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 171

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 172 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 223

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++    ++  
Sbjct: 224 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLE----AVTS 270

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAF 955
           DPL ++      KDF N      ++ NY N+ +D + ELSS +I SQSFG+P + F
Sbjct: 271 DPLYSQ------KDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 314


>gi|298125884|gb|ADB96393.2| auxin response factor 19 [Arabidopsis thaliana]
 gi|298125892|gb|ADB96397.2| auxin response factor 19 [Arabidopsis thaliana]
 gi|304308297|gb|ADL70461.1| auxin response factor 19 [Arabidopsis thaliana]
 gi|304308307|gb|ADL70466.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 318

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 48/236 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 120 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 172

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 173 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 224

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++    ++  
Sbjct: 225 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLE----AVTS 271

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAF 955
           DPL ++      KDF N      ++ NY N+ +D + ELSS +I SQSFG+P + F
Sbjct: 272 DPLYSQ------KDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 315


>gi|298125888|gb|ADB96395.2| auxin response factor 19 [Arabidopsis thaliana]
 gi|298125890|gb|ADB96396.2| auxin response factor 19 [Arabidopsis thaliana]
          Length = 316

 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 48/236 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 118 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 170

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 171 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 222

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++    ++  
Sbjct: 223 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLE----AVTS 269

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAF 955
           DPL ++      KDF N      ++ NY N+ +D + ELSS +I SQSFG+P + F
Sbjct: 270 DPLYSQ------KDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 313


>gi|304308311|gb|ADL70468.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 318

 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 48/236 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 120 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 172

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 173 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 224

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++    ++  
Sbjct: 225 TYCP---DVVSPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLE----AVTS 271

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAF 955
           DPL ++      KDF N      ++ NY N+ +D + ELSS +I SQSFG+P + F
Sbjct: 272 DPLYSQ------KDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 315


>gi|304308305|gb|ADL70465.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 308

 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 48/234 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 114 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 166

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 167 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 218

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++    ++  
Sbjct: 219 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLE----AVTS 265

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDM 953
           DPL ++      KDF N      ++ NY N+ +D + ELSS +I SQSFG+P +
Sbjct: 266 DPLYSQ------KDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSI 307


>gi|125599349|gb|EAZ38925.1| hypothetical protein OsJ_23345 [Oryza sativa Japonica Group]
          Length = 265

 Score = 48.5 bits (114), Expect = 0.020,   Method: Composition-based stats.
 Identities = 73/257 (28%), Positives = 104/257 (40%), Gaps = 43/257 (16%)

Query: 154 AEKIFPPLDFSMQPPAQELMARDLHDNIWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAG 213
           A+ +FPPL  +     Q L+ +DLH +  TF +  +G  KR  L   W  F        G
Sbjct: 4   AKGVFPPLVDA--KAVQPLLVKDLHGSPMTFDYGRKG--KRVTLAKVWKKFRDDMDFVDG 59

Query: 214 DSVLFIRDEKQ-----QLLLGIRRAN-------------RQPANLSSSVLSSDSMHIGIL 255
           DSV+F+R         +L +G+RR               R P    ++V  +        
Sbjct: 60  DSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRYRPPTPPQAAVQEAVL------ 113

Query: 256 AAAAHAAANNSPFTVFYNPRASPSEFVVPLAKYYKAVHSNQISLG-MRFRMMFETEESGT 314
            AAA  AA    FTV Y  R    EFVVP     + + +   SL  + F    E      
Sbjct: 114 -AAAGHAAAGERFTVAYRSRKDGDEFVVPREAVEEGLRARLTSLAEVEFVWAVEDGAPPI 172

Query: 315 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVTAPFFICP-- 372
               G +T I+           WRNL++ WD ++  E     + W++ PV     I P  
Sbjct: 173 VGPRGKVTAIA-------TGQLWRNLEIVWDGNS--EMDMSANFWQVRPVEE-VDISPST 222

Query: 373 PPFFRSKHPRQADDDAS 389
           PP  R K+  + DD AS
Sbjct: 223 PPPKRLKNC-EIDDTAS 238


>gi|304308295|gb|ADL70460.1| auxin response factor 19 [Arabidopsis thaliana]
 gi|304308301|gb|ADL70463.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 318

 Score = 48.1 bits (113), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 48/236 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 120 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 172

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 173 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 224

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++        
Sbjct: 225 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLEA------- 268

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAF 955
              +T   +   KDF N      ++ NY N+ +D + ELSS +I SQSFG+P + F
Sbjct: 269 ---VTSDALYSQKDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 315


>gi|304308303|gb|ADL70464.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 312

 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 48/232 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 120 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 172

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 173 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 224

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++    ++  
Sbjct: 225 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLE----AVTS 271

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVP 951
           DPL ++      KDF N      ++ NY N+ +D + ELSS +I SQSFG+P
Sbjct: 272 DPLYSQ------KDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIP 311


>gi|304308293|gb|ADL70459.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 318

 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 48/236 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 120 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 172

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 173 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 224

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++    ++  
Sbjct: 225 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLE----AVTS 271

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAF 955
           D L ++      KDF N      ++ NY N+ +D + ELSS +I SQSFG+P + F
Sbjct: 272 DALYSQ------KDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 315


>gi|304308309|gb|ADL70467.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 315

 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 48/236 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 118 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 170

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 171 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 222

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++        
Sbjct: 223 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLEA------- 266

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAF 955
              +T   +   KDF N      ++ NY N+ +D + ELSS +I SQSFG+P + F
Sbjct: 267 ---VTSDALYSQKDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 313


>gi|304308289|gb|ADL70457.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 316

 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 48/236 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 118 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 170

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 171 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 222

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++    ++  
Sbjct: 223 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLE----AVTS 269

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDMAF 955
           D L ++      KDF N      ++ NY N+ +D + ELSS +I SQSFG+P + F
Sbjct: 270 DALYSQ------KDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSIPF 313


>gi|298125886|gb|ADB96394.2| auxin response factor 19 [Arabidopsis thaliana]
          Length = 313

 Score = 45.4 bits (106), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 107/234 (45%), Gaps = 48/234 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 119 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 171

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 172 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 223

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++        
Sbjct: 224 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLEA------- 267

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVPDM 953
              +T   +   KDF N      ++ NY N+ +D + ELSS +I SQSFG+P +
Sbjct: 268 ---VTSDALYSQKDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIPSI 312


>gi|304308299|gb|ADL70462.1| auxin response factor 19 [Arabidopsis thaliana]
          Length = 310

 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 48/232 (20%)

Query: 728 AAGVGQSVITD-DNPSCSTSPSTNNC-QRLIQPT-INSRTHRSAGIGEEVAQSASALLNP 784
           AAG   S  TD + PSCSTSPS NN     + PT   SR        ++  Q+AS   + 
Sbjct: 118 AAGRSHSGHTDGEAPSCSTSPSANNTGHDNVSPTNFLSRN-------QQQGQAASVSASD 170

Query: 785 SALETMPSNANLVKDLPHKSDVKPSVNISKTQNQGFFTPQTYLNGAATQTDYLDTSSSTT 844
           S  E     +N V++L  K++ + S  +   ++ G      +    +  TD +D S++ T
Sbjct: 171 SVFERA---SNPVQELYTKTESRISQGMMNMKSAG-----EHFRFKSAVTDQIDVSTAGT 222

Query: 845 SVCLSQNDV--HLQQNNSLSYNPQSTLRDASQDGEVPV-DPRSNIPYGANIDGPLGSMNP 901
           + C    DV   +QQ  +        L     DG+     PR+N+ +  N++        
Sbjct: 223 TYCP---DVVGPVQQQQTF------PLPSFGFDGDCQSHHPRNNLAFPGNLEA------- 266

Query: 902 DPLLTKGMMGLGKDFSNNISSGAMLANYENS-KDAQQELSS-SIVSQSFGVP 951
              +T   +   KDF N      ++ NY N+ +D + ELSS +I SQSFG+P
Sbjct: 267 ---VTSDALYSQKDFQN------LVPNYGNTPRDIETELSSAAISSQSFGIP 309


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.128    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,989,851,042
Number of Sequences: 23463169
Number of extensions: 702445826
Number of successful extensions: 2858900
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4999
Number of HSP's successfully gapped in prelim test: 20121
Number of HSP's that attempted gapping in prelim test: 2058759
Number of HSP's gapped (non-prelim): 228149
length of query: 989
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 836
effective length of database: 8,769,330,510
effective search space: 7331160306360
effective search space used: 7331160306360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 82 (36.2 bits)