Your job contains 1 sequence.
>001970
MDSDEEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGRRRFHGAFT
GGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQF
DTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVVPATESIGVKLLLKMGWRRGRSIKD
SLYDARREGRKALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTPVYVLNPKQDLHG
LGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGLKSGKVAPGFGIGALEEYDA
EDEDLYGADYEFVDTYAEEDEEPSRLSKDVRKKLVGREQQDVLPGFILASKSDYQLERFD
PPVVPKDFVPHHKFPGPLETDSKLAVPLPPEIPPPEDNNLKLLIEGVATLVARCGKLFED
ISREKNQSNPLFSFLTGGNGHDYYARKLWEARQKRNDQTKLVSDGKSSETAQRLTAETRG
KLLGERPLERSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDPAKQER
FERFLKEKYQGGLRSTDSGGASAMSEAARARERLDFEAAAEAIEKAKQRKEGSISTEQLL
GSSGAGRMLFTSGGLEQVKDTQAEDLTNKKVYPRREEFQWRPSPILCKRFDLIDPYIGKP
PPAPRIKSKMDSLIFISDSVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQV
ENVERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLESLGKEL
GLEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMPD
QRETAQEGKSQKNEFTPGNPLNVSDKYKETDKYKGEIGCERSKEDEKSKLTSSHHKNRSS
NSSSEDERSRKRSRRHRYSSDSYSDSSSEYRDQHHSRSKGRSKGSSREKSSSRRKHRKHR
DRDSPRRSHNDAEKERTARKKDKKRRRD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001970
(988 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178302 - symbol:TGH "AT5G23080" species:3702 ... 2255 5.0e-236 2
UNIPROTKB|F1RNW7 - symbol:GPATCH1 "Uncharacterized protei... 349 1.2e-35 4
MGI|MGI:1914721 - symbol:Gpatch1 "G patch domain containi... 341 4.9e-35 4
UNIPROTKB|Q9BRR8 - symbol:GPATCH1 "G patch domain-contain... 345 1.5e-34 4
UNIPROTKB|F1NUA0 - symbol:GPATCH1 "Uncharacterized protei... 324 2.3e-34 4
UNIPROTKB|F1LU70 - symbol:Gpatch1 "Protein Gpatch1" speci... 321 2.3e-34 5
UNIPROTKB|G1K130 - symbol:GPATCH1 "G patch domain-contain... 340 6.8e-34 4
RGD|1308935 - symbol:Gpatch1 "G patch domain containing 1... 321 8.2e-34 4
UNIPROTKB|F1P8I4 - symbol:GPATCH1 "Uncharacterized protei... 339 8.7e-34 3
UNIPROTKB|Q24K12 - symbol:GPATCH1 "G patch domain-contain... 340 1.4e-33 4
UNIPROTKB|F1NFC3 - symbol:GPATCH1 "Uncharacterized protei... 324 3.6e-33 4
ZFIN|ZDB-GENE-040914-65 - symbol:gpatch1 "G patch domain ... 334 6.8e-33 3
FB|FBgn0036386 - symbol:CG8833 species:7227 "Drosophila m... 306 1.3e-31 4
WB|WBGene00011109 - symbol:R07E5.1 species:6239 "Caenorha... 332 6.0e-29 4
UNIPROTKB|Q21827 - symbol:R07E5.1 "G patch domain-contain... 332 6.0e-29 4
UNIPROTKB|F1NI35 - symbol:GPATCH1 "Uncharacterized protei... 324 3.9e-28 1
ASPGD|ASPL0000059796 - symbol:AN1172 species:162425 "Emer... 324 8.2e-28 4
UNIPROTKB|G4MY58 - symbol:MGG_11240 "G patch domain-conta... 291 1.2e-26 2
DICTYBASE|DDB_G0281261 - symbol:DDB_G0281261 "putative G-... 217 4.9e-19 5
POMBASE|SPAC20H4.06c - symbol:SPAC20H4.06c "RNA-binding p... 229 2.1e-16 4
>TAIR|locus:2178302 [details] [associations]
symbol:TGH "AT5G23080" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=ISS;TAS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006396 "RNA processing"
evidence=ISS;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009734 "auxin mediated signaling pathway" evidence=IMP]
[GO:0009926 "auxin polar transport" evidence=IMP] [GO:0010087
"phloem or xylem histogenesis" evidence=IMP] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0030422 "production of siRNA
involved in RNA interference" evidence=IMP] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=IMP]
[GO:0070878 "primary miRNA binding" evidence=IDA] [GO:0070883
"pre-miRNA binding" evidence=IDA] InterPro:IPR000061 Pfam:PF01805
PROSITE:PS50128 SMART:SM00648 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0010087 GO:GO:0030422
SUPFAM:SSF109905 GO:GO:0035196 GO:GO:0070883 eggNOG:NOG150083
KO:K13123 InterPro:IPR011666 Pfam:PF07713 OMA:FAPDDYE
UniGene:At.49050 UniGene:At.71128 EMBL:BT008588 EMBL:AK118129
IPI:IPI00524870 RefSeq:NP_197699.2 ProteinModelPortal:Q8GXN9
SMR:Q8GXN9 IntAct:Q8GXN9 STRING:Q8GXN9 PaxDb:Q8GXN9 PRIDE:Q8GXN9
EnsemblPlants:AT5G23080.1 GeneID:832372 KEGG:ath:AT5G23080
TAIR:At5g23080 HOGENOM:HOG000030798 InParanoid:Q8GXN9
PhylomeDB:Q8GXN9 ProtClustDB:CLSN2680193 ArrayExpress:Q8GXN9
Genevestigator:Q8GXN9 GO:GO:0070878 Uniprot:Q8GXN9
Length = 930
Score = 2255 (798.9 bits), Expect = 5.0e-236, Sum P(2) = 5.0e-236
Identities = 467/807 (57%), Positives = 552/807 (68%)
Query: 1 MDSDEEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGRRRFHGAFT 60
M SDEED+VF GTPIEREEEI SR+KK++A ASG+LRTL WKQEVTDEEGRRRFHGAFT
Sbjct: 1 MGSDEEDFVFHGTPIEREEEIASRKKKAVAGASGNLRTLPAWKQEVTDEEGRRRFHGAFT 60
Query: 61 GGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQF 120
GG+SAGYYNTVGSKEGW PQ+FTSSR+NRA ++QSI +FLDEDEKA+ EGKS S QF
Sbjct: 61 GGYSAGYYNTVGSKEGWAPQSFTSSRQNRAGARKQSISDFLDEDEKADMEGKSLSASSQF 120
Query: 121 DTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVVPATESIGVKLLLKMGWRRGRSIKD 180
DTFG TAAE +RK AEKEQ +RPSAIPGP PDELV P +ESIGVKLLLKMGWRRG SIK+
Sbjct: 121 DTFGFTAAEHSRKHAEKEQHERPSAIPGPVPDELVAPVSESIGVKLLLKMGWRRGHSIKE 180
Query: 181 --SLYDARREGRKALLAFSSDDAKTAFNDA--EPVDLEQSVNDDGQLSRCTPVYVLNPKQ 236
+ DARRE RKA LAF +D+ D+ ++E S+ +D ++S TPVYVLNPKQ
Sbjct: 181 VRASSDARREARKAFLAFYTDENTKETPDSLVSETEVETSLGEDIKISESTPVYVLNPKQ 240
Query: 237 DLHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGLKSGKVAPGFGIXXXX 296
DLHGLGYDP+K+APEFREKKRSR S + + G K LS+K+SLFG KSGK+APGFGI
Sbjct: 241 DLHGLGYDPFKHAPEFREKKRSRMSANKEVGFRKPLSMKESLFGPKSGKIAPGFGIGALE 300
Query: 297 XXXXXXXXXXXXXXXFVDTYAEEDEEPSRLSKDVRKKLVGREQQDVLPGFILASKSDYQL 356
F TY EDE+P+R S D R +L +E DVLPGF A SDY +
Sbjct: 301 ELDVEDEDVYAGYD-FDQTYVIEDEQPARQSNDNRLRLTSKEH-DVLPGFGAAKNSDYSM 358
Query: 357 ERXXXXXXXXXXXXXXXFPGPLETDSKLAVXXXXXXXXXXDNNLKLLIEGVATLVARCGK 416
ER F GPLE ++K V DNNLKLLIEG AT V+RCGK
Sbjct: 359 ERFNPPIIPKDFVARHKFSGPLEAETKPTVSAPPEVPPPADNNLKLLIEGFATFVSRCGK 418
Query: 417 LFEDISREKNQSNPLFSFLTGGNGHDYYARKLWEARQKRNDQTKLVSDGKSSETAQRLTA 476
L+ED+SREKNQSN LF FL GNGHDYYAR+LWE +QKR DQ+KL D K S T Q++TA
Sbjct: 419 LYEDLSREKNQSNQLFDFLREGNGHDYYARRLWEEQQKRKDQSKLTLDVKVSPTVQKMTA 478
Query: 477 ETRGKLLGERPLERSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDPA 536
ETRG LLGE+PL+RS +++ S S Q NLSDTFTKSAS E + PF+DDPA
Sbjct: 479 ETRGSLLGEKPLQRSLKETDTSASSGGSFQFPTNLSDTFTKSASSQEAADAVKPFKDDPA 538
Query: 537 KQERFERFLKEKYQGGLRSTDXXXXXXXXXXXXXXXXLDFXXXXXXXXXXXXXXXGSIST 596
KQERFE+FLKEKY+GGLR+TD LDF +T
Sbjct: 539 KQERFEQFLKEKYKGGLRTTDSNRVNSMSESARAQERLDFEAAAEAIEKGKAYKEVRRAT 598
Query: 597 EQLLGSSGAGRMLFTSGGLEQVKDTQAEDLTNKKVYPRREEFQWRPSPILCKRFDLIDPY 656
EQ L AG + FTSGG EQ+KDT D+ + K YP+REEFQWRPSP+LCKRFDL DP+
Sbjct: 599 EQPLDFL-AGGLQFTSGGTEQIKDTGVVDMKSSKTYPKREEFQWRPSPLLCKRFDLPDPF 657
Query: 657 IGKPPPAPRIKSKMDSLIFISDSVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEA 716
+GK PPAPR ++KMDSL+F+ D+VKA + +S P+ + +E E
Sbjct: 658 MGKLPPAPRARNKMDSLVFLPDTVKAASARQ----------VSESQVPKKETSI-EEPEV 706
Query: 717 DIQVENVERPVDLYKAIFSDDS-DDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLES 775
+++VENVERPVDLYKAIFSDDS DDE + N K E EKK E A T L+ LIAGDFLES
Sbjct: 707 EVEVENVERPVDLYKAIFSDDSEDDEDQPMNGKIQEGQEKKNEAAATTLNRLIAGDFLES 766
Query: 776 LGKELGLEVPHESPPYPTSKAKNPAQK 802
LGKELG EVP E SK ++ + K
Sbjct: 767 LGKELGFEVPMEEEIKSRSKPEDSSDK 793
Score = 44 (20.5 bits), Expect = 5.0e-236, Sum P(2) = 5.0e-236
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 846 QEGKSQKNEF--TPGNPLNVSDKYKETDKYKGEIGCERSKEDE-KSK 889
QEG+ +KNE T N L D + K E+G E E+E KS+
Sbjct: 741 QEGQEKKNEAAATTLNRLIAGDFLESLGK---ELGFEVPMEEEIKSR 784
>UNIPROTKB|F1RNW7 [details] [associations]
symbol:GPATCH1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000467
Pfam:PF01585 PROSITE:PS50174 SMART:SM00443 GO:GO:0003676
GO:GO:0071013 InterPro:IPR011666 Pfam:PF07713
GeneTree:ENSGT00390000007074 OMA:TAPKQYK EMBL:CU638683
EMBL:FP565926 Ensembl:ENSSSCT00000003166 Uniprot:F1RNW7
Length = 933
Score = 349 (127.9 bits), Expect = 1.2e-35, Sum P(4) = 1.2e-35
Identities = 99/257 (38%), Positives = 140/257 (54%)
Query: 1 MDSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGA 58
+DSD +ED V +GT +E EE R KK I L+ Q V DE+GR +RFHGA
Sbjct: 4 LDSDSDEDLVTYGTGLEPLEE-GERPKKPIP-----LQD-----QTVRDEKGRYKRFHGA 52
Query: 59 FTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSL 118
F+GGFSAGY+NTVGSKEGWTP +F SSR+NRA+ +F+DE++ +EF G + +
Sbjct: 53 FSGGFSAGYFNTVGSKEGWTPSSFVSSRQNRADKSVLGPEDFMDEEDLSEF-GIAPKAIV 111
Query: 119 QFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRS 177
D F S + R++A ++ + IPG D+L+ PA S+G +LL KMGW+ G+
Sbjct: 112 TTDDFASKTKDRIREKA-RQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQG 170
Query: 178 IKDSLYDA-RREGRKALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQL---SRCTPVYVLN 233
I + RR+ + F S A + P D + + TPV
Sbjct: 171 IGPRVKRRPRRQKPEHTFIFYSFSFPPAACETAPDDEDDDYLPENVTFAPKDVTPVD-FT 229
Query: 234 PKQDLHGLGY---DPYK 247
PK ++HGL Y DP++
Sbjct: 230 PKDNVHGLAYKGLDPHQ 246
Score = 96 (38.9 bits), Expect = 1.2e-35, Sum P(4) = 1.2e-35
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 635 REEFQWRPSPILCKRFDLIDPYIGKPPPA-PRIKSKMDSLIFISDSVKAPRLEESVAANN 693
R+ F+W P +LCKRF++ DPY PR+K S +F + + P S A
Sbjct: 609 RDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPRVKRDKYS-VF--NFLTIPESASSPATQA 665
Query: 694 DRYSAPQSDAPEISR 708
PQ P+ SR
Sbjct: 666 SSEKGPQHRGPDKSR 680
Score = 64 (27.6 bits), Expect = 2.4e-32, Sum P(4) = 2.4e-32
Identities = 30/143 (20%), Positives = 58/143 (40%)
Query: 667 KSKMDSLI-FIS---DSVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQVEN 722
+ K DS+ F+S V P+ E S + + P ++ K +++ + E
Sbjct: 691 EKKEDSISEFLSLARSKVGPPKQESSSLVKKEEEHVTE---PVSNKVANKGVDSQPEGEG 747
Query: 723 VERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLESLGKELGL 782
+DL+KAIF+ SD++ + ++ + + + D +E
Sbjct: 748 SRPSMDLFKAIFASSSDEKSSSSEDEQGDSEDDQEGTREDDFKSPQETDLVEPSSVAQAS 807
Query: 783 E-VPHESPPY-PTSKAKNPAQKE 803
E VP E P+ P K + ++E
Sbjct: 808 EPVPQEPVPFFPIQKMQIDEREE 830
Score = 60 (26.2 bits), Expect = 1.2e-35, Sum P(4) = 1.2e-35
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 530 PFQDDPAKQERFERFLKEKYQG 551
PF DP KQ+R+E FL +G
Sbjct: 506 PFAKDPEKQKRYEEFLANMKRG 527
Score = 51 (23.0 bits), Expect = 1.2e-35, Sum P(4) = 1.2e-35
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 468 SETAQRLTAETRGKLLGERPLERSA 492
+++ +L A RG+LLGE P + +A
Sbjct: 409 TQSRHQLNASKRGELLGETPSQGAA 433
Score = 42 (19.8 bits), Expect = 4.6e-28, Sum P(3) = 4.6e-28
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 680 VKAPRLEESVAANNDRYSAPQSDAPEI 706
+KA +L+ A N S PQ+ +P++
Sbjct: 457 LKAAQLKARSLAQNASSSRPQASSPDM 483
Score = 40 (19.1 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 16/82 (19%), Positives = 35/82 (42%)
Query: 424 EKNQSNPLFSFLTGGNGHDYYARKLWEARQKRNDQ--TKLVSDGKSSETAQRLTAETRGK 481
E+ + P + N + L E +K ++ TK K + + + +GK
Sbjct: 827 EREEFGPQLPPVFCPNARQKFEAPLKEKHKKNKEKHKTKKEHRRKKEKKKKHRKHKHKGK 886
Query: 482 LLGERPLERSARDSSFSVGSEN 503
++P + S+ +S+ S S++
Sbjct: 887 QKNKKPEKSSSSESTDSSDSQS 908
Score = 37 (18.1 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 535 PAKQERFERFLKEKYQ 550
P +++FE LKEK++
Sbjct: 841 PNARQKFEAPLKEKHK 856
>MGI|MGI:1914721 [details] [associations]
symbol:Gpatch1 "G patch domain containing 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR000467 Pfam:PF01585
PROSITE:PS50174 SMART:SM00443 MGI:MGI:1914721 GO:GO:0003676
GO:GO:0071013 CTD:55094 eggNOG:NOG150083 HOGENOM:HOG000112797
HOVERGEN:HBG071446 KO:K13123 OrthoDB:EOG4KSPJB InterPro:IPR011666
Pfam:PF07713 GeneTree:ENSGT00390000007074 OMA:TAPKQYK EMBL:AK004868
EMBL:BC026394 EMBL:BC132155 EMBL:BC125584 IPI:IPI00119881
RefSeq:NP_080457.1 UniGene:Mm.358705 ProteinModelPortal:Q9DBM1
PhosphoSite:Q9DBM1 PaxDb:Q9DBM1 PRIDE:Q9DBM1
Ensembl:ENSMUST00000079693 GeneID:67471 KEGG:mmu:67471
UCSC:uc009gjq.1 InParanoid:Q9DBM1 NextBio:324678 Bgee:Q9DBM1
CleanEx:MM_GPATCH1 Genevestigator:Q9DBM1 Uniprot:Q9DBM1
Length = 930
Score = 341 (125.1 bits), Expect = 4.9e-35, Sum P(4) = 4.9e-35
Identities = 100/262 (38%), Positives = 147/262 (56%)
Query: 1 MDSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGA 58
+DSD +ED + +GT +E +E R KK I L+ Q V DE+GR +RFHGA
Sbjct: 4 LDSDSDEDLISYGTGLEPLDE-GERPKKPIP-----LQD-----QTVRDEKGRYKRFHGA 52
Query: 59 FTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSL 118
F+GGFSAGY+NTVGSKEGWTP TF SSR+NRA+ +F+DE++ +EF G + +
Sbjct: 53 FSGGFSAGYFNTVGSKEGWTPSTFVSSRQNRADKSALGPEDFMDEEDLSEF-GIAPKAIV 111
Query: 119 QFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRS 177
D F S + R++A ++ + IPG D+L+ PA S+G +LL KMGW+ G+
Sbjct: 112 TTDDFASKTKDRIREKA-RQLAAAAAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQG 170
Query: 178 IKDSLY-DARRE----GRK----ALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTP 228
+ + ARR+ G K AL S++++ +D P ++ + D P
Sbjct: 171 VGPRVKRKARRQKPDPGVKIYGCALPPGGSEESEDEDDDYLPDNVTFAPKD------VMP 224
Query: 229 VYVLNPKQDLHGLGY---DPYK 247
V PK ++HGL Y DP++
Sbjct: 225 VD-FTPKDNVHGLAYKGLDPHQ 245
Score = 96 (38.9 bits), Expect = 4.9e-35, Sum P(4) = 4.9e-35
Identities = 40/143 (27%), Positives = 65/143 (45%)
Query: 667 KSKMDSLI-FISD--SVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQVENV 723
+ K DS+ F+S S P +ES A + AP+ P V K ++A E
Sbjct: 690 EKKEDSISEFLSQARSKVGPPKQESSALGSKEEQAPE---PRPDTTVDKAVDAQTDGEGS 746
Query: 724 ERPVDLYKAIFSDDSDDEVETFNPKK--VEDPEKKIEVANTALSH-LIAGDFLESLGKEL 780
+DL+KAIF+ SD++ + ++ ED ++ E A+ S AG+ L E
Sbjct: 747 RPSMDLFKAIFASSSDEKSSSSEEEQDDSEDSQEHTEEASLKGSQEAAAGETSVVLAAEP 806
Query: 781 GLEVPHESPPYPTSKAKNPAQKE 803
E + P+P KA+ ++E
Sbjct: 807 --EPCEPATPFPIQKAQIDEREE 827
Score = 93 (37.8 bits), Expect = 9.9e-35, Sum P(4) = 9.9e-35
Identities = 26/76 (34%), Positives = 37/76 (48%)
Query: 635 REEFQWRPSPILCKRFDLIDPYIGKPPPA-PRIKSKMDSLI-FISDSVKAPRLEESVAAN 692
R+ F+W P +LCKRF++ DPY G PR+K S+ F++ AP V +
Sbjct: 608 RDTFEWHPDKLLCKRFNVPDPYPGSTLVGLPRVKRDKYSVFNFLTLPEPAPLPTAPVPSE 667
Query: 693 NDRYSAPQSDAPEISR 708
APQ + SR
Sbjct: 668 K----APQQRGSDKSR 679
Score = 58 (25.5 bits), Expect = 4.9e-35, Sum P(4) = 4.9e-35
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 530 PFQDDPAKQERFERFLKEKYQG 551
PF DP KQ R+E FL +G
Sbjct: 505 PFAKDPEKQRRYEEFLVHMKKG 526
Score = 56 (24.8 bits), Expect = 4.9e-35, Sum P(4) = 4.9e-35
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 468 SETAQRLTAETRGKLLGERPLERSA 492
+ + +L A RG+LLGE P++ SA
Sbjct: 408 THSRHQLNASKRGELLGEMPIQGSA 432
Score = 43 (20.2 bits), Expect = 1.3e-29, Sum P(4) = 1.3e-29
Identities = 15/73 (20%), Positives = 26/73 (35%)
Query: 780 LGLEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMP 839
L L P P P K P Q+ + + + + K S +S+ + P
Sbjct: 651 LTLPEPAPLPTAPVPSEKAPQQRGSDKSRKPSRWDTSKQEKKEDSISEFLSQARSKVGPP 710
Query: 840 DQRETAQEGKSQK 852
Q +A K ++
Sbjct: 711 KQESSALGSKEEQ 723
Score = 42 (19.8 bits), Expect = 1.7e-29, Sum P(4) = 1.7e-29
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 635 REEFQWRPSPILC--KRFDLIDPYIGKPPPAP-RIKSKMD 671
REEF R P+ C R L P KP + R KSK +
Sbjct: 825 REEFGPRLPPVFCPNSRQKLEIPQKEKPKKSKERHKSKKE 864
Score = 37 (18.1 bits), Expect = 7.0e-33, Sum P(4) = 7.0e-33
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 489 ERSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDPAKQERFERFLKEK 548
ERS F+ ++ + LS FT + + +V P + ++ + +K K
Sbjct: 543 ERSREREEFARAAQLYVSSNSTLSSRFTHAKEEEDSDQVEVPRDQENDVSDK-QSAVKMK 601
Query: 549 YQGGL-RST 556
G L R T
Sbjct: 602 MFGKLTRDT 610
>UNIPROTKB|Q9BRR8 [details] [associations]
symbol:GPATCH1 "G patch domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 GO:GO:0000398 GO:GO:0071013 CTD:55094
eggNOG:NOG150083 HOGENOM:HOG000112797 HOVERGEN:HBG071446 KO:K13123
OrthoDB:EOG4KSPJB InterPro:IPR011666 Pfam:PF07713 OMA:TAPKQYK
EMBL:AF434677 EMBL:BC006108 EMBL:AL834465 EMBL:AK001068
IPI:IPI00550477 RefSeq:NP_060495.2 UniGene:Hs.466436
ProteinModelPortal:Q9BRR8 STRING:Q9BRR8 PhosphoSite:Q9BRR8
DMDM:74732921 PaxDb:Q9BRR8 PRIDE:Q9BRR8 Ensembl:ENST00000170564
GeneID:55094 KEGG:hsa:55094 UCSC:uc002nug.1 GeneCards:GC19P033571
HGNC:HGNC:24658 HPA:HPA043430 HPA:HPA043604 neXtProt:NX_Q9BRR8
PharmGKB:PA162390063 InParanoid:Q9BRR8 PhylomeDB:Q9BRR8
ChiTaRS:GPATCH1 GenomeRNAi:55094 NextBio:58677 Bgee:Q9BRR8
CleanEx:HS_GPATCH1 Genevestigator:Q9BRR8 Uniprot:Q9BRR8
Length = 931
Score = 345 (126.5 bits), Expect = 1.5e-34, Sum P(4) = 1.5e-34
Identities = 104/261 (39%), Positives = 146/261 (55%)
Query: 2 DSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGAF 59
DSD EED V +GT +E EE R KK I L+ Q V DE+GR +RFHGAF
Sbjct: 5 DSDSEEDLVSYGTGLEPLEE-GERPKKPIP-----LQD-----QTVRDEKGRYKRFHGAF 53
Query: 60 TGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQ 119
+GGFSAGY+NTVGSKEGWTP TF SSR+NRA+ +F+DE++ +EF G + +
Sbjct: 54 SGGFSAGYFNTVGSKEGWTPSTFVSSRQNRADKSVLGPEDFMDEEDLSEF-GIAPKAIVT 112
Query: 120 FDTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRSI 178
D F S + R++A ++ + IPG D+L+ PA S+G +LL KMGW+ G+ +
Sbjct: 113 TDDFASKTKDRIREKA-RQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQGV 171
Query: 179 KDSLYDA-RRE----GRK----ALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTPV 229
+ RR+ G K AL SS+ ++ +D P ++ + D TPV
Sbjct: 172 GPRVKRRPRRQKPDPGVKIYGCALPPGSSEGSEGEDDDYLPDNVTFAPKD------VTPV 225
Query: 230 YVLNPKQDLHGLGY---DPYK 247
PK ++HGL Y DP++
Sbjct: 226 D-FTPKDNVHGLAYKGLDPHQ 245
Score = 88 (36.0 bits), Expect = 1.5e-34, Sum P(4) = 1.5e-34
Identities = 61/280 (21%), Positives = 119/280 (42%)
Query: 635 REEFQWRPSPILCKRFDLIDPY-----IGKPPPAPRIKSKMDSLIFISDSVKAPRLEESV 689
R+ F+W P +LCKRF++ DPY +G P R K + + + + ++ P +
Sbjct: 608 RDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPR-VKRDKYSVFNFLTLPETASLPTTQ--- 663
Query: 690 AANNDRYSAPQSDAPEISRDVTKEIEADIQVENVERPVDLYKAIFSDDSDDEVETFNPKK 749
A++++ S Q P+ SR ++ + + E E + + ++ ++ + +P
Sbjct: 664 -ASSEKVS--QHRGPDKSRKPSRWDTS--KHEKKEDSISEFLSLARSKAEPPKQQSSPLV 718
Query: 750 VEDPEKKIEV-ANTALSHLIAGDFLESLGKELGLEVPHE---SPPYPTSKAKNPAQKETS 805
++ E E+ AN ++ + E G +++ S S + Q ++
Sbjct: 719 NKEEEHAPELSANQTVNKDVDAQ-AEGEGSRPSMDLFRAIFASSSDEKSSSSEDEQGDSE 777
Query: 806 NANAG-GNANILPVDN----KSSSTRNAVSRTS--------IERWMPDQRETAQEGKSQK 852
+ AG G AN + ++SS +A+ I++ D+RE + G
Sbjct: 778 DDQAGSGEANFQSSQDTDLGETSSVAHALVPAPQEPPPSFPIQKMQIDERE--EFGPRLP 835
Query: 853 NEFTPG--NPLNV--SDKYKET-DKYKGEIGCERSKEDEK 887
F P L V +K+K+ DK+K + R KE +K
Sbjct: 836 PVFCPNARQTLEVPQKEKHKKNKDKHKAKKEHRRKKEKKK 875
Score = 60 (26.2 bits), Expect = 1.5e-34, Sum P(4) = 1.5e-34
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 530 PFQDDPAKQERFERFLKEKYQG 551
PF DP KQ+R++ FL QG
Sbjct: 505 PFAKDPEKQKRYDEFLVHMKQG 526
Score = 53 (23.7 bits), Expect = 1.5e-34, Sum P(4) = 1.5e-34
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 443 YYARKLWEARQKRNDQTKLVSD--GKSS-----ETAQRLTAETRGKLLGERPLERSA 492
+Y R + A + + +++S+ GK++ + +L A R +LLGE P++ SA
Sbjct: 375 HYFRPMVAATSENSHLLQVLSESAGKATPDPGTHSKHQLNASKRAELLGETPIQGSA 431
Score = 40 (19.1 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 450 EARQKRNDQTKLVSDG--KSSETAQRLTAETRGKLLGERPLERSARDSSFSVGSEN 503
E +K D+ K + K + + + +GK ++P + S+ +SS S S++
Sbjct: 852 EKHKKNKDKHKAKKEHRRKKEKKKKHRKHKHKGKQKNKKPEKSSSSESSDSSDSQS 907
>UNIPROTKB|F1NUA0 [details] [associations]
symbol:GPATCH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 InterPro:IPR011666 Pfam:PF07713
GeneTree:ENSGT00390000007074 EMBL:AADN02031710 EMBL:AADN02031711
IPI:IPI00818604 Ensembl:ENSGALT00000039383 ArrayExpress:F1NUA0
Uniprot:F1NUA0
Length = 922
Score = 324 (119.1 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 95/253 (37%), Positives = 140/253 (55%)
Query: 2 DSDEEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGAFT 60
D +EED V +GT ++ +E R KK + L+ +Q V D +GR +RFHGAFT
Sbjct: 7 DGEEEDLVNYGTALQPLQE-GERIKKPVP-----LQ-----EQTVKDAKGRYQRFHGAFT 55
Query: 61 GGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQF 120
GGFSAGY+NTVG+KEGWTP F SSR+ RA+ +F+DE++ +EF G +
Sbjct: 56 GGFSAGYFNTVGTKEGWTPSAFISSRQKRADRTVLGPEDFMDEEDLSEF-GIAPRDITTT 114
Query: 121 DTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRSIK 179
D F S A + +++A ++ +AIPG + D+L+ P+ +IGV+LL KMGW+ G+ I
Sbjct: 115 DDFASKAKDRIKEKA-RQIAGVVAAIPGTSAFDDLIGPSKITIGVELLRKMGWKEGQGIG 173
Query: 180 DSLYDARREGRKALLAFSSDDAKTAFNDAEPVDLEQSVNDDG---QLSRCT--PVYV--- 231
+ +R+ R+ D + A P L + D+ Q T P V
Sbjct: 174 PRV---KRKPRRQ----KPDPEVKIYGCALPPGLSEGSEDEEDEYQPENVTFAPKDVMPV 226
Query: 232 -LNPKQDLHGLGY 243
L PK+++HGLGY
Sbjct: 227 DLTPKENVHGLGY 239
Score = 112 (44.5 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 59/280 (21%), Positives = 113/280 (40%)
Query: 624 EDLTNKKVYPR--REEFQWRPSPILCKRFDLIDPYIGKPPPA-PRIKSKMDSLIFISDSV 680
E K++ + R++F+W P +LCKRF++ DPY P++K S +F ++
Sbjct: 594 ESAVKMKMFGKLTRDKFEWHPEKLLCKRFNVPDPYPESSIVGLPKVKRDKYS-VFNFLTL 652
Query: 681 KAPRLEESVAANNDRYSAPQSDAPEI-SR-DVTKEIEADIQVENVERPVDLYKAIFSDDS 738
P + N + P+ SR D++ + + + + +++P +++S
Sbjct: 653 SEPTTSGTQETNERKQEGNSVSKPKKPSRWDISDKEKEKSKADLLQKP----SVPTTEES 708
Query: 739 DDEVETFNPKKV--EDPEKKIEVANTALSHLIAGDFLESLGKELGLEVPHESPPYP-TSK 795
+ P +V ED +++ E + L F+ S ++ E + P TS
Sbjct: 709 GTKATETLPSEVTSEDKDQEEEEESRPPMDLFKAIFVSSSDEKSSSEEESDEEQQPATSV 768
Query: 796 AKNPAQKE-----TSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMPDQRETAQEGKS 850
+ K+ +S++N I SSS + + E + P + G +
Sbjct: 769 VDSETTKQAGLPDSSSSNIQDKVAIKAEPGVSSSATSKQEQNDAEEFGPKLPPSFSSGST 828
Query: 851 -QKNEFTPGNPLNVSDKYKETDKYKGEIGCERSKEDEKSK 889
Q+ P + S K +K+K R+K D K K
Sbjct: 829 WQQETAVPASSPGPSRK----EKHKKNREKHRTKRDHKHK 864
Score = 69 (29.3 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 469 ETAQRLTAETRGKLLGERPLERSARDSSFSVGSENGI--QIQFNLSDTFTKSASFNELPE 526
E Q + + K+L ++P R+S F S N + Q L + S +
Sbjct: 450 EVKQATEQQMKAKMLPQQP-----RNSRFQPASPNDASQKWQMLLGGQLANAGSSD---- 500
Query: 527 VATPFQDDPAKQERFERFLKEKYQG 551
PF DP KQ+R+E F+K QG
Sbjct: 501 -FKPFARDPEKQKRYESFVKSLKQG 524
Score = 41 (19.5 bits), Expect = 2.3e-34, Sum P(4) = 2.3e-34
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 313 VDTYAEEDEEPSRLSKDVR 331
++ +A + E+PS L DVR
Sbjct: 257 LNLFAADSEDPSSLIGDVR 275
Score = 41 (19.5 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 213 LEQSVNDDGQLSRCTPVYVLNPKQDLHGLGYDPYKNAPEFREKKRSRT 260
LE+ +DD + Y K + G G + E+R KKRS T
Sbjct: 294 LEEE-DDDIYATEALSKYDTVLKDEEPGDGLYGWTAPKEYRSKKRSET 340
Score = 39 (18.8 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 124 GSTAAE--FARKQAEKEQQQRPSAIPGPAPDEL 154
GS A+ A +++ +Q + + GPAP L
Sbjct: 405 GSDTAQGRHALNASQRREQLGETVLKGPAPSVL 437
>UNIPROTKB|F1LU70 [details] [associations]
symbol:Gpatch1 "Protein Gpatch1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
RGD:1308935 GO:GO:0003676 GO:GO:0071013 InterPro:IPR011666
Pfam:PF07713 GeneTree:ENSGT00390000007074 OMA:TAPKQYK
IPI:IPI00766665 Ensembl:ENSRNOT00000015791 ArrayExpress:F1LU70
Uniprot:F1LU70
Length = 906
Score = 321 (118.1 bits), Expect = 2.3e-34, Sum P(5) = 2.3e-34
Identities = 86/218 (39%), Positives = 125/218 (57%)
Query: 44 QEVTDEEGR-RRFHGAFTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLD 102
Q V DE+GR +RFHGAF+GGFSAGY+NTVGSKEGWTP TF SSR+NRA+ +F+D
Sbjct: 13 QTVRDEKGRYKRFHGAFSGGFSAGYFNTVGSKEGWTPSTFVSSRQNRADKSALGPEDFMD 72
Query: 103 EDEKAEFEGKSFGTSLQFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATES 161
E++ +EF G + + D F S + R++A ++ + IPG D+L+ PA S
Sbjct: 73 EEDLSEF-GIAPKAIVTTDDFASKTKDRIREKA-RQLAAAAAPIPGATLLDDLITPAKLS 130
Query: 162 IGVKLLLKMGWRRGRSIKDSLY-DARRE----GRK----ALLAFSSDDAKTAFNDAEPVD 212
+G +LL KMGW+ G+ + + ARR+ G K AL S+ ++ +D P +
Sbjct: 131 VGFELLRKMGWKEGQGVGPRVKRKARRQKADPGVKIYGCALPPGGSEGSEDEDDDYLPDN 190
Query: 213 LEQSVNDDGQLSRCTPVYVLNPKQDLHGLGY---DPYK 247
+ + D PV PK ++HGL Y DP++
Sbjct: 191 VTFAPKD------VMPVD-FTPKDNVHGLAYKGLDPHQ 221
Score = 102 (41.0 bits), Expect = 2.3e-34, Sum P(5) = 2.3e-34
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 617 QVKDTQAEDLTNK------KVYPR--REEFQWRPSPILCKRFDLIDPYIGKPPPA-PRIK 667
+V Q DL++K K++ + R+ F+W P +LCKRF++ DPY G PR+K
Sbjct: 558 EVPRDQENDLSDKQSAVKMKMFGKLTRDTFEWHPDKLLCKRFNVPDPYPGSTLVGLPRVK 617
Query: 668 SKMDSLIFISDSVKAPRLEESVAANNDRYSAPQSDAPEISR 708
S +F ++ P + +++ APQ P+ SR
Sbjct: 618 RDKYS-VFNFLTLSEPASLPTAPVPSEK--APQQRGPDKSR 655
Score = 82 (33.9 bits), Expect = 1.0e-31, Sum P(4) = 1.0e-31
Identities = 38/143 (26%), Positives = 63/143 (44%)
Query: 667 KSKMDSLI-FISD--SVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQVENV 723
+ K DS+ F+S S P +ES A + Q+ P V K ++A E
Sbjct: 666 EKKEDSISEFLSQARSKVGPSKQESSALGSKE---EQASEPHPDMTVDKAVDAQPDREGS 722
Query: 724 ERPVDLYKAIFSDDSDDEVETFNPKK--VEDPEKKIEVANTALSHLIA-GDFLESLGKEL 780
+DL+KAIF+ SD++ + ++ ED ++ E A+ S A G+ SL
Sbjct: 723 RPSMDLFKAIFASSSDEKSSSSEEEQDDSEDSQEHTEEASLKGSQEAAVGE--TSLIHAA 780
Query: 781 GLEVPHESPPYPTSKAKNPAQKE 803
E + P+P K + ++E
Sbjct: 781 EQEPGEPATPFPIQKVQIDEREE 803
Score = 59 (25.8 bits), Expect = 2.3e-34, Sum P(5) = 2.3e-34
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 443 YYARKLWEARQKRNDQTKLVSD--GKSSE---TAQR--LTAETRGKLLGERPLERSA 492
+Y R + A K +++S+ GK+ + T R L A RG+LLGE P++ SA
Sbjct: 352 HYFRPVVAATSKNAHLLQVLSESSGKAGQDMGTHSRHQLNASKRGELLGEMPVQGSA 408
Score = 58 (25.5 bits), Expect = 2.3e-34, Sum P(5) = 2.3e-34
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 530 PFQDDPAKQERFERFLKEKYQG 551
PF DP KQ R+E FL +G
Sbjct: 481 PFAKDPEKQRRYEEFLVHMKKG 502
Score = 45 (20.9 bits), Expect = 6.3e-28, Sum P(4) = 6.3e-28
Identities = 18/87 (20%), Positives = 32/87 (36%)
Query: 780 LGLEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMP 839
L L P P P K P Q+ + + + K S +S+ + P
Sbjct: 627 LTLSEPASLPTAPVPSEKAPQQRGPDKSRKPSRWDTSKQEKKEDSISEFLSQAR-SKVGP 685
Query: 840 DQRETAQEGKSQKNEFTPGNPLNVSDK 866
++E++ G ++ P + V DK
Sbjct: 686 SKQESSALGSKEEQASEPHPDMTV-DK 711
Score = 45 (20.9 bits), Expect = 7.1e-24, Sum P(3) = 7.1e-24
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 225 RCTPVYVLNPKQDLHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTK 270
R PV+ N +Q L P+K P+ + K+R R+ + R K
Sbjct: 807 RLPPVFCPNVRQKLE----IPHKEKPK-KSKERHRSKKEHRRKREK 847
Score = 44 (20.5 bits), Expect = 2.3e-34, Sum P(5) = 2.3e-34
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 782 LEVPHESPPYPTSKAKNPAQKE 803
LE+PH+ P SK ++ ++KE
Sbjct: 820 LEIPHKEKP-KKSKERHRSKKE 840
Score = 42 (19.8 bits), Expect = 1.5e-27, Sum P(5) = 1.5e-27
Identities = 20/60 (33%), Positives = 26/60 (43%)
Query: 616 EQVKDTQAEDLTNKKVY-PRREEFQWRPSPILCK--RFDLIDPYIGKPPPAP-RIKSKMD 671
EQ A +KV REEF R P+ C R L P+ KP + R +SK +
Sbjct: 781 EQEPGEPATPFPIQKVQIDEREEFGPRLPPVFCPNVRQKLEIPHKEKPKKSKERHRSKKE 840
Score = 38 (18.4 bits), Expect = 1.6e-25, Sum P(5) = 1.6e-25
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 489 ERSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDPAKQERFERFLKEK 548
ERS F+ ++ + LS FT + ++ +V P + ++ + +K K
Sbjct: 519 ERSREREEFARAAQLYVSSNSTLSSRFTHAKEEDDSDQVEVPRDQENDLSDK-QSAVKMK 577
Query: 549 YQGGL-RST 556
G L R T
Sbjct: 578 MFGKLTRDT 586
Score = 37 (18.1 bits), Expect = 1.2e-33, Sum P(5) = 1.2e-33
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 786 HESPPYPTSKAKNPAQKETSNANAGGNA 813
H+S KN + + T ++++G +A
Sbjct: 856 HKSKQKNKKSEKNSSSESTDSSDSGSDA 883
>UNIPROTKB|G1K130 [details] [associations]
symbol:GPATCH1 "G patch domain-containing protein 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 GO:GO:0071013 InterPro:IPR011666
Pfam:PF07713 GeneTree:ENSGT00390000007074 OMA:TAPKQYK
EMBL:DAAA02046856 Ensembl:ENSBTAT00000000963 Uniprot:G1K130
Length = 930
Score = 340 (124.7 bits), Expect = 6.8e-34, Sum P(4) = 6.8e-34
Identities = 102/262 (38%), Positives = 147/262 (56%)
Query: 1 MDSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGA 58
+DSD +ED V +GT +E EE R KK I L+ Q V DE+GR +RFHGA
Sbjct: 4 LDSDSDEDLVSYGTGLEPLEE-GERPKKPIP-----LQD-----QTVRDEKGRYKRFHGA 52
Query: 59 FTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSL 118
F+GGFSAGY+NTVGSKEGWTP +F SSR+NRA+ +F+DE++ +EF G + + +
Sbjct: 53 FSGGFSAGYFNTVGSKEGWTPSSFVSSRQNRADKSVLGPEDFMDEEDLSEF-GIAPKSIV 111
Query: 119 QFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRS 177
D F S + R++A ++ + IPG D+L+ PA S+G +LL KMGW+ G+
Sbjct: 112 TTDDFASKTKDRIREKA-RQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQG 170
Query: 178 IKDSLYDA-RRE----GRK----ALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTP 228
I + RR+ G K AL S+ ++ +D P ++ + D TP
Sbjct: 171 IGPRVKRRPRRQKPDPGVKIYGCALPPGGSEGSEDEDDDYLPENVTFAPKD------VTP 224
Query: 229 VYVLNPKQDLHGLGY---DPYK 247
V PK ++HGL Y DP++
Sbjct: 225 VD-FTPKDNVHGLAYKGLDPHQ 245
Score = 93 (37.8 bits), Expect = 6.8e-34, Sum P(4) = 6.8e-34
Identities = 27/85 (31%), Positives = 43/85 (50%)
Query: 635 REEFQWRPSPILCKRFDLIDPY-----IGKPPPAPRIKSKMDSLIFISDSVKAPRLEESV 689
R+ F+W P +LCKRF++ DPY +G P R K + S + I ++ +P + S
Sbjct: 608 RDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPR-VKRDKYSVFSFLTIPETASSPVTQASS 666
Query: 690 AANNDRYSAPQSDAPEISR-DVTKE 713
++ +S P SR D +KE
Sbjct: 667 EKVAQHRASDKSRKP--SRWDTSKE 689
Score = 75 (31.5 bits), Expect = 4.8e-32, Sum P(4) = 4.8e-32
Identities = 53/231 (22%), Positives = 93/231 (40%)
Query: 667 KSKMDSLIFIS---DSVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQVENV 723
+ K DS+ S V + E S N + A +S + ++ V K++++ + E
Sbjct: 690 EKKEDSISEFSLARSKVGPAKPEPSPLVNKEEARATESVSNKV---VNKDVDSQTEGEGS 746
Query: 724 ERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLESLGKEL--G 781
+DL+KAIF+ SD++ + ++ D E E A DF S +L
Sbjct: 747 RPSMDLFKAIFASSSDEKSSSSEDEQ-GDSEDDQEGTREA-------DFKSSQETDLVEA 798
Query: 782 LEVPHESPPYPTSKAKN-PAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMPD 840
V S P P A P QK + + PV NA R +E + +
Sbjct: 799 SSVAQASEPAPQEPAPFFPIQKMQIDEREAFGPRLPPV-----FCPNA--RQKLEAPLKE 851
Query: 841 QRETAQEGKSQKNEFTPGNPLNVSDKYKETDKYKGEIGCERSKEDEKSKLT 891
+ + +E K E K+++ K+KG+ ++S++ S+ T
Sbjct: 852 KHKKNKEKHKTKKEHR--RKKEKKKKHRK-HKHKGKQKNKKSEKSSSSEST 899
Score = 60 (26.2 bits), Expect = 6.8e-34, Sum P(4) = 6.8e-34
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 530 PFQDDPAKQERFERFLKEKYQG 551
PF DP KQ+R+E FL +G
Sbjct: 505 PFAKDPEKQKRYEEFLANMKRG 526
Score = 47 (21.6 bits), Expect = 6.8e-34, Sum P(4) = 6.8e-34
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 443 YYARKLWEARQKRNDQTKLVSD--GKSSE---TAQR--LTAETRGKLLGERPLE 489
+Y R + A + + +++S+ GK + T R L A RG+LLGE P++
Sbjct: 376 HYFRPVVAATSENSHLLQVLSESAGKPTNDPGTRSRHQLNACKRGELLGETPIQ 429
Score = 42 (19.8 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 225 RCTPVYVLNPKQDLHG-LGYDPYKNAPEFREKKRSRTSGHSKNGRTK 270
R PV+ N +Q L L KN + + KK R K K
Sbjct: 832 RLPPVFCPNARQKLEAPLKEKHKKNKEKHKTKKEHRRKKEKKKKHRK 878
>RGD|1308935 [details] [associations]
symbol:Gpatch1 "G patch domain containing 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 RGD:1308935 GO:GO:0003676 InterPro:IPR011666
Pfam:PF07713 IPI:IPI00950495 Ensembl:ENSRNOT00000066902
ArrayExpress:F1M521 Uniprot:F1M521
Length = 896
Score = 321 (118.1 bits), Expect = 8.2e-34, Sum P(4) = 8.2e-34
Identities = 86/218 (39%), Positives = 125/218 (57%)
Query: 44 QEVTDEEGR-RRFHGAFTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLD 102
Q V DE+GR +RFHGAF+GGFSAGY+NTVGSKEGWTP TF SSR+NRA+ +F+D
Sbjct: 13 QTVRDEKGRYKRFHGAFSGGFSAGYFNTVGSKEGWTPSTFVSSRQNRADKSALGPEDFMD 72
Query: 103 EDEKAEFEGKSFGTSLQFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATES 161
E++ +EF G + + D F S + R++A ++ + IPG D+L+ PA S
Sbjct: 73 EEDLSEF-GIAPKAIVTTDDFASKTKDRIREKA-RQLAAAAAPIPGATLLDDLITPAKLS 130
Query: 162 IGVKLLLKMGWRRGRSIKDSLY-DARRE----GRK----ALLAFSSDDAKTAFNDAEPVD 212
+G +LL KMGW+ G+ + + ARR+ G K AL S+ ++ +D P +
Sbjct: 131 VGFELLRKMGWKEGQGVGPRVKRKARRQKADPGVKIYGCALPPGGSEGSEDEDDDYLPDN 190
Query: 213 LEQSVNDDGQLSRCTPVYVLNPKQDLHGLGY---DPYK 247
+ + D PV PK ++HGL Y DP++
Sbjct: 191 VTFAPKD------VMPVD-FTPKDNVHGLAYKGLDPHQ 221
Score = 102 (41.0 bits), Expect = 8.2e-34, Sum P(4) = 8.2e-34
Identities = 31/101 (30%), Positives = 51/101 (50%)
Query: 617 QVKDTQAEDLTNK------KVYPR--REEFQWRPSPILCKRFDLIDPYIGKPPPA-PRIK 667
+V Q DL++K K++ + R+ F+W P +LCKRF++ DPY G PR+K
Sbjct: 558 EVPRDQENDLSDKQSAVKMKMFGKLTRDTFEWHPDKLLCKRFNVPDPYPGSTLVGLPRVK 617
Query: 668 SKMDSLIFISDSVKAPRLEESVAANNDRYSAPQSDAPEISR 708
S +F ++ P + +++ APQ P+ SR
Sbjct: 618 RDKYS-VFNFLTLSEPASLPTAPVPSEK--APQQRGPDKSR 655
Score = 80 (33.2 bits), Expect = 1.5e-31, Sum P(4) = 1.5e-31
Identities = 47/213 (22%), Positives = 88/213 (41%)
Query: 667 KSKMDSLI-FISD--SVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQVENV 723
+ K DS+ F+S S P +ES A + Q+ P V K ++A E
Sbjct: 666 EKKEDSISEFLSQARSKVGPSKQESSALGSKE---EQASEPHPDMTVDKAVDAQPDREGS 722
Query: 724 ERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLESLGKELGLE 783
+DL+KAIF+ SD++ + + ++ +D E E A + G ++G+ +
Sbjct: 723 RPSMDLFKAIFASSSDEKSSS-SEEEQDDSEDSQEHTEEAS---LKGSQEAAVGETSLIH 778
Query: 784 VPHESPPYPTSKAKNPAQKETS-NANAGGNANIL---PVDNKSSSTRNAVSRTSIERWMP 839
+ P P A P+++ S N + G +L P +++S + ++
Sbjct: 779 AAEQEPGEP---ATPPSKRYRSMNGKSSGLGCLLSSAPTFDRNSRYLTKRNPRKAKKDTG 835
Query: 840 DQRETAQEGKSQKNEFTPGNPLNVSDKYKETDK 872
+R T EG+ ++ VS + + K
Sbjct: 836 ARRNT--EGRERRKRNIRNTNTKVSKRIRNQKK 866
Score = 59 (25.8 bits), Expect = 8.2e-34, Sum P(4) = 8.2e-34
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 443 YYARKLWEARQKRNDQTKLVSD--GKSSE---TAQR--LTAETRGKLLGERPLERSA 492
+Y R + A K +++S+ GK+ + T R L A RG+LLGE P++ SA
Sbjct: 352 HYFRPVVAATSKNAHLLQVLSESSGKAGQDMGTHSRHQLNASKRGELLGEMPVQGSA 408
Score = 58 (25.5 bits), Expect = 8.2e-34, Sum P(4) = 8.2e-34
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 530 PFQDDPAKQERFERFLKEKYQG 551
PF DP KQ R+E FL +G
Sbjct: 481 PFAKDPEKQRRYEEFLVHMKKG 502
Score = 45 (20.9 bits), Expect = 5.8e-28, Sum P(4) = 5.8e-28
Identities = 18/87 (20%), Positives = 32/87 (36%)
Query: 780 LGLEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMP 839
L L P P P K P Q+ + + + K S +S+ + P
Sbjct: 627 LTLSEPASLPTAPVPSEKAPQQRGPDKSRKPSRWDTSKQEKKEDSISEFLSQAR-SKVGP 685
Query: 840 DQRETAQEGKSQKNEFTPGNPLNVSDK 866
++E++ G ++ P + V DK
Sbjct: 686 SKQESSALGSKEEQASEPHPDMTV-DK 711
Score = 38 (18.4 bits), Expect = 1.7e-29, Sum P(4) = 1.7e-29
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 489 ERSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDPAKQERFERFLKEK 548
ERS F+ ++ + LS FT + ++ +V P + ++ + +K K
Sbjct: 519 ERSREREEFARAAQLYVSSNSTLSSRFTHAKEEDDSDQVEVPRDQENDLSDK-QSAVKMK 577
Query: 549 YQGGL-RST 556
G L R T
Sbjct: 578 MFGKLTRDT 586
>UNIPROTKB|F1P8I4 [details] [associations]
symbol:GPATCH1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 InterPro:IPR011666 Pfam:PF07713
GeneTree:ENSGT00390000007074 OMA:TAPKQYK EMBL:AAEX03001056
Ensembl:ENSCAFT00000011948 Uniprot:F1P8I4
Length = 1111
Score = 339 (124.4 bits), Expect = 8.7e-34, Sum P(3) = 8.7e-34
Identities = 103/261 (39%), Positives = 145/261 (55%)
Query: 2 DSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGAF 59
DSD +ED V +GT +E EE R KK I L+ Q V DE+GR +RFHGAF
Sbjct: 184 DSDSDEDLVSYGTGLEPLEE-GERPKKPIP-----LQD-----QTVRDEKGRYKRFHGAF 232
Query: 60 TGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQ 119
+GGFSAGY+NTVGSKEGWTP +F SSR+NRA+ +F+DE++ +EF G + +
Sbjct: 233 SGGFSAGYFNTVGSKEGWTPSSFVSSRQNRADKSVLGPEDFMDEEDLSEF-GIAPKAIVT 291
Query: 120 FDTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRSI 178
D F S + R++A ++ + IPG D+L+ PA SIG +LL KMGW+ G+ I
Sbjct: 292 TDDFASKTKDRIREKA-RQLAAATAPIPGATLLDDLITPAKLSIGFELLRKMGWKEGQGI 350
Query: 179 KDSLYDA-RRE----GRK----ALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTPV 229
+ RR+ G K AL S+ ++ +D P ++ + D TPV
Sbjct: 351 GPRVKRRPRRQKPDPGVKIYGCALPPGGSEGSEEEDDDYVPENVTFAPKD------VTPV 404
Query: 230 YVLNPKQDLHGLGY---DPYK 247
PK ++HGL Y DP++
Sbjct: 405 D-FTPKDNVHGLAYKGLDPHQ 424
Score = 97 (39.2 bits), Expect = 8.7e-34, Sum P(3) = 8.7e-34
Identities = 54/227 (23%), Positives = 92/227 (40%)
Query: 635 REEFQWRPSPILCKRFDLIDPY-----IGKPPPAPRIKSKMDSLIFISDSVKAPRLEESV 689
R+ F+W P +LCKRF++ DPY +G P R K + + + I ++ P +
Sbjct: 788 RDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPR-VKRDKYSVFNFLTIPETASLPTTQ--- 843
Query: 690 AANNDRYSAPQSDAPEISRDVTKEIEADIQVENVERPVDLYKAIFSDDSDDEVETFNPKK 749
A+N++ Q PE SR ++ + Q E E + + ++ + P
Sbjct: 844 -ASNEKVL--QHQGPEKSRKPSRW-DTSKQ-EKKEDSLSEFLSLARSKVGPPKQESGPLV 898
Query: 750 VEDPEKKIE-VANTALSHLIAGDFLESLGKELGL-EVPHESPPYPTSKAKNPAQKETSNA 807
+ + E E ++N +S + E + L + S S + Q ++ +
Sbjct: 899 IREEEPVTESLSNKNISKGVDSQTEEGSRPSMDLFKAIFASSSDEKSSSSEDEQGDSEDD 958
Query: 808 NAG-GNANILPVDNKSSSTRNAVSRTSIERWM-PDQRETAQEGKSQK 852
AG G A D KSS N+V S+ P +E A QK
Sbjct: 959 QAGPGEA-----DFKSSQETNSVETPSVAHASEPAPQEPAPSFPIQK 1000
Score = 66 (28.3 bits), Expect = 8.7e-34, Sum P(3) = 8.7e-34
Identities = 20/76 (26%), Positives = 35/76 (46%)
Query: 476 AETRGKLLGERPLERSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDP 535
A+ + + L + ++ SS VG + + + T++++F PF DP
Sbjct: 638 AQLKARSLAQIASSSRSQPSSADVGHCSSWHMALSGRTATTRASNFK-------PFAKDP 690
Query: 536 AKQERFERFLKEKYQG 551
KQ+R+E FL QG
Sbjct: 691 EKQKRYEEFLVNMKQG 706
Score = 62 (26.9 bits), Expect = 2.3e-33, Sum P(3) = 2.3e-33
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 460 KLVSDGKSSETAQRLTAETRGKLLGERPLERSARDSSFSVGSENGIQIQFNLSDTFTKSA 519
K V D + + +L A RG+LLGE P++ SA + ++ +I+ T K+A
Sbjct: 580 KPVPDA-GTHSRHQLNASKRGELLGETPVQGSATSVLEFLSQKDKERIKEMKQATDLKAA 638
Query: 520 SFN--ELPEVATPFQDDPAKQE 539
L ++A+ + P+ +
Sbjct: 639 QLKARSLAQIASSSRSQPSSAD 660
Score = 37 (18.1 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 13/55 (23%), Positives = 23/55 (41%)
Query: 782 LEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIER 836
L+V ES P A ++ + + + G PV ++S +S+ ER
Sbjct: 571 LQVLSESAGKPVPDAGTHSRHQLNASKRGELLGETPVQGSATSVLEFLSQKDKER 625
Score = 37 (18.1 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 22/93 (23%), Positives = 36/93 (38%)
Query: 460 KLVSDGKSSETAQ--RLTAETRGKLLGERPLERSARDSSFSVGSENGIQIQFNLSDTFTK 517
K +S G S+T + R + + + E+S+ SE+ Q +D F
Sbjct: 912 KNISKGVDSQTEEGSRPSMDLFKAIFASSSDEKSSSSEDEQGDSEDD-QAGPGEAD-FKS 969
Query: 518 SASFNELPEVATPFQDDPAKQERFERFLKEKYQ 550
S N + + +PA QE F +K Q
Sbjct: 970 SQETNSVETPSVAHASEPAPQEPAPSFPIQKLQ 1002
>UNIPROTKB|Q24K12 [details] [associations]
symbol:GPATCH1 "G patch domain-containing protein 1"
species:9913 "Bos taurus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0003676 EMBL:BC114043 EMBL:BT026213
IPI:IPI00705680 RefSeq:NP_001069246.1 UniGene:Bt.6399 PRIDE:Q24K12
GeneID:518738 KEGG:bta:518738 CTD:55094 eggNOG:NOG150083
HOGENOM:HOG000112797 HOVERGEN:HBG071446 InParanoid:Q24K12 KO:K13123
OrthoDB:EOG4KSPJB NextBio:20872714 InterPro:IPR011666 Pfam:PF07713
Uniprot:Q24K12
Length = 931
Score = 340 (124.7 bits), Expect = 1.4e-33, Sum P(4) = 1.4e-33
Identities = 102/262 (38%), Positives = 147/262 (56%)
Query: 1 MDSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGA 58
+DSD +ED V +GT +E EE R KK I L+ Q V DE+GR +RFHGA
Sbjct: 4 LDSDSDEDLVSYGTGLEPLEE-GERPKKPIP-----LQD-----QTVRDEKGRYKRFHGA 52
Query: 59 FTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSL 118
F+GGFSAGY+NTVGSKEGWTP +F SSR+NRA+ +F+DE++ +EF G + + +
Sbjct: 53 FSGGFSAGYFNTVGSKEGWTPSSFVSSRQNRADKSVLGPEDFMDEEDLSEF-GIAPKSIV 111
Query: 119 QFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRS 177
D F S + R++A ++ + IPG D+L+ PA S+G +LL KMGW+ G+
Sbjct: 112 TTDDFASKTKDRIREKA-RQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQG 170
Query: 178 IKDSLYDA-RRE----GRK----ALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTP 228
I + RR+ G K AL S+ ++ +D P ++ + D TP
Sbjct: 171 IGPRVKRRPRRQKPDPGVKIYGCALPPGGSEGSEDEDDDYLPENVTFAPKD------VTP 224
Query: 229 VYVLNPKQDLHGLGY---DPYK 247
V PK ++HGL Y DP++
Sbjct: 225 VD-FTPKDNVHGLAYKGLDPHQ 245
Score = 90 (36.7 bits), Expect = 1.4e-33, Sum P(4) = 1.4e-33
Identities = 26/85 (30%), Positives = 43/85 (50%)
Query: 635 REEFQWRPSPILCKRFDLIDPY-----IGKPPPAPRIKSKMDSLIFISDSVKAPRLEESV 689
R+ F+W P +LCKRF++ DPY +G P R K + + + I ++ +P + S
Sbjct: 608 RDTFEWHPDKLLCKRFNVPDPYPDSTLVGLPR-VKRDKYSVFNFLTIPETASSPVTQASS 666
Query: 690 AANNDRYSAPQSDAPEISR-DVTKE 713
++ +S P SR D +KE
Sbjct: 667 EKVAQHRASDKSRKP--SRWDTSKE 689
Score = 77 (32.2 bits), Expect = 3.0e-32, Sum P(4) = 3.0e-32
Identities = 54/232 (23%), Positives = 95/232 (40%)
Query: 667 KSKMDSLI-FIS---DSVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQVEN 722
+ K DS+ F+S V + E S N + A +S + ++ V K++++ + E
Sbjct: 690 EKKEDSISEFLSLARSKVGPAKPEPSPLVNKEEARATESVSNKV---VNKDVDSQTEGEG 746
Query: 723 VERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLESLGKEL-- 780
+DL+KAIF+ SD++ + ++ D E E A DF S +L
Sbjct: 747 SRPSMDLFKAIFASSSDEKSSSSEDEQ-GDSEDDQEGTREA-------DFKSSQETDLVE 798
Query: 781 GLEVPHESPPYPTSKAKN-PAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMP 839
V S P P A P QK + + PV NA R +E +
Sbjct: 799 ASSVAQASEPAPQEPAPFFPIQKMQIDEREAFGPRLPPV-----FCPNA--RQKLEAPLK 851
Query: 840 DQRETAQEGKSQKNEFTPGNPLNVSDKYKETDKYKGEIGCERSKEDEKSKLT 891
++ + +E K E K+++ K+KG+ ++S++ S+ T
Sbjct: 852 EKHKKNKEKHKTKKEHR--RKKEKKKKHRK-HKHKGKQKNKKSEKSSSSEST 900
Score = 60 (26.2 bits), Expect = 1.4e-33, Sum P(4) = 1.4e-33
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 530 PFQDDPAKQERFERFLKEKYQG 551
PF DP KQ+R+E FL +G
Sbjct: 505 PFAKDPEKQKRYEEFLANMKRG 526
Score = 47 (21.6 bits), Expect = 1.4e-33, Sum P(4) = 1.4e-33
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 443 YYARKLWEARQKRNDQTKLVSD--GKSSE---TAQR--LTAETRGKLLGERPLE 489
+Y R + A + + +++S+ GK + T R L A RG+LLGE P++
Sbjct: 376 HYFRPVVAATSENSHLLQVLSESAGKPTNDPGTRSRHQLNACKRGELLGETPIQ 429
Score = 42 (19.8 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 14/47 (29%), Positives = 18/47 (38%)
Query: 225 RCTPVYVLNPKQDLHG-LGYDPYKNAPEFREKKRSRTSGHSKNGRTK 270
R PV+ N +Q L L KN + + KK R K K
Sbjct: 833 RLPPVFCPNARQKLEAPLKEKHKKNKEKHKTKKEHRRKKEKKKKHRK 879
>UNIPROTKB|F1NFC3 [details] [associations]
symbol:GPATCH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 GO:GO:0071013 InterPro:IPR011666 Pfam:PF07713
GeneTree:ENSGT00390000007074 OMA:TAPKQYK EMBL:AADN02031710
EMBL:AADN02031711 IPI:IPI00820108 Ensembl:ENSGALT00000007726
ArrayExpress:F1NFC3 Uniprot:F1NFC3
Length = 943
Score = 324 (119.1 bits), Expect = 3.6e-33, Sum P(4) = 3.6e-33
Identities = 95/253 (37%), Positives = 140/253 (55%)
Query: 2 DSDEEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGAFT 60
D +EED V +GT ++ +E R KK + L+ +Q V D +GR +RFHGAFT
Sbjct: 9 DGEEEDLVNYGTALQPLQE-GERIKKPVP-----LQ-----EQTVKDAKGRYQRFHGAFT 57
Query: 61 GGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQF 120
GGFSAGY+NTVG+KEGWTP F SSR+ RA+ +F+DE++ +EF G +
Sbjct: 58 GGFSAGYFNTVGTKEGWTPSAFISSRQKRADRTVLGPEDFMDEEDLSEF-GIAPRDITTT 116
Query: 121 DTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRSIK 179
D F S A + +++A ++ +AIPG + D+L+ P+ +IGV+LL KMGW+ G+ I
Sbjct: 117 DDFASKAKDRIKEKA-RQIAGVVAAIPGTSAFDDLIGPSKITIGVELLRKMGWKEGQGIG 175
Query: 180 DSLYDARREGRKALLAFSSDDAKTAFNDAEPVDLEQSVNDDG---QLSRCT--PVYV--- 231
+ +R+ R+ D + A P L + D+ Q T P V
Sbjct: 176 PRV---KRKPRRQ----KPDPEVKIYGCALPPGLSEGSEDEEDEYQPENVTFAPKDVMPV 228
Query: 232 -LNPKQDLHGLGY 243
L PK+++HGLGY
Sbjct: 229 DLTPKENVHGLGY 241
Score = 101 (40.6 bits), Expect = 3.6e-33, Sum P(4) = 3.6e-33
Identities = 64/287 (22%), Positives = 120/287 (41%)
Query: 624 EDLTNKKVYPR--REEFQWRPSPILCKRFDLIDPY-----IGKPPPAPRIKSKMDSLIFI 676
E K++ + R++F+W P +LCKRF++ DPY +G P R K + + + +
Sbjct: 596 ESAVKMKMFGKLTRDKFEWHPEKLLCKRFNVPDPYPESSIVGLPK-VKRDKYSVFNFLTL 654
Query: 677 SDSVKAPRLEESVAANNDRYSAPQSDAPEISR-DVT-KEIEADIQVEN----VERPVDLY 730
S+ + E + + +S+ + SR D++ KE E + DL
Sbjct: 655 SEPTTSGTQETNERKQEGNSVSSKSEPKKPSRWDISDKEKEKKDSISEFISLARSKADLL 714
Query: 731 K---AIFSDDSDDEVETFNPKKV--EDPEKKIEVANTALSHLIAGDFLESLGKELGLEVP 785
+ +++S + P +V ED +++ E + L F+ S ++ E
Sbjct: 715 QKPSVPTTEESGTKATETLPSEVTSEDKDQEEEEESRPPMDLFKAIFVSSSDEKSSSEEE 774
Query: 786 HESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMPDQRETA 845
+ P A + ET+ AG LP D+ SS+ ++ V+ E + +
Sbjct: 775 SDEEQQP---ATSVVDSETTK-QAG-----LP-DSSSSNIQDKVA-IKAEPGVSSSATSK 823
Query: 846 QEGKSQKNEFTPGNPLNVSDK---YKETDKYKGEIGCERSKEDEKSK 889
QE ++ EF P P + S +ET G R ++ +K++
Sbjct: 824 QE-QNDAEEFGPKLPPSFSSGSTWQQETAVPASSPGPSRKEKHKKNR 869
Score = 69 (29.3 bits), Expect = 3.6e-33, Sum P(4) = 3.6e-33
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 469 ETAQRLTAETRGKLLGERPLERSARDSSFSVGSENGI--QIQFNLSDTFTKSASFNELPE 526
E Q + + K+L ++P R+S F S N + Q L + S +
Sbjct: 452 EVKQATEQQMKAKMLPQQP-----RNSRFQPASPNDASQKWQMLLGGQLANAGSSD---- 502
Query: 527 VATPFQDDPAKQERFERFLKEKYQG 551
PF DP KQ+R+E F+K QG
Sbjct: 503 -FKPFARDPEKQKRYESFVKSLKQG 526
Score = 41 (19.5 bits), Expect = 3.6e-33, Sum P(4) = 3.6e-33
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 313 VDTYAEEDEEPSRLSKDVR 331
++ +A + E+PS L DVR
Sbjct: 259 LNLFAADSEDPSSLIGDVR 277
>ZFIN|ZDB-GENE-040914-65 [details] [associations]
symbol:gpatch1 "G patch domain containing 1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
ZFIN:ZDB-GENE-040914-65 GO:GO:0003676 InterPro:IPR011666
Pfam:PF07713 GeneTree:ENSGT00390000007074 EMBL:BX323797
Ensembl:ENSDART00000009386 Uniprot:G1K2G6
Length = 980
Score = 334 (122.6 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 94/248 (37%), Positives = 131/248 (52%)
Query: 2 DSDEEDYVFFGTPIER-EEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGAF 59
DSDE D+V +GTP+E EE+ SR+ + E Q V DE+GR +RFHGAF
Sbjct: 11 DSDE-DFVTYGTPLEPLEEDEPSRKPIPVHE------------QTVKDEKGRYKRFHGAF 57
Query: 60 TGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQ 119
TGGFSAGY+NTVGSKEGWTP TF SSR+ ++E +F+DE++ E G +
Sbjct: 58 TGGFSAGYFNTVGSKEGWTPSTFVSSRQQKSEKHNARPEDFMDEEDFGE-HGIAPREITT 116
Query: 120 FDTFGSTAAEFARKQAEKEQQQRPSAIPG-PAP-DELVVPATESIGVKLLLKMGWRRGRS 177
D F S + + +A + + IPG P +E + PA SIGV+LL KMGW+ G+
Sbjct: 117 TDEFASERKDQIKDKA-RAVSSLAALIPGDPGLLEEFIAPARSSIGVELLRKMGWKDGQG 175
Query: 178 IKDSLYDARREGRKALLA--FSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTPVYVLNPK 235
+ L +R+ RK + + ++E D E + + + PK
Sbjct: 176 VGPRL---KRKPRKQNTGRVYGCSLPRNGSEESEEDDDEFAPENVTFAPKDVVPVDFTPK 232
Query: 236 QDLHGLGY 243
D HGLGY
Sbjct: 233 VDSHGLGY 240
Score = 99 (39.9 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 616 EQVKDTQAEDLTNK-KVYPR--REEFQWRPSPILCKRFDLIDPYIGKPPPA-PRIKSKMD 671
EQ D + K K++ + R+ F+W P +LCKRF++ DPY G P++K
Sbjct: 608 EQENDVDDKQAAVKMKMFGKLTRDTFEWHPDKLLCKRFNIPDPYPGSSMVGMPKVKRDKY 667
Query: 672 SLI-FISDSVKAPRLEESVAANNDRYSAPQSDAPEISRDVT-KEIEADIQVENVERPVDL 729
S+ F++ + + N S P ++ + + K+ D+ V+ E P D
Sbjct: 668 SVFNFLT-------IPDGSQVNPSDPKPSSSTIPRVTAEASSKKSRWDVPVQASE-PKDA 719
Query: 730 YKAIFSDDSDDEVETFNPKKVE 751
A S+ + EV + E
Sbjct: 720 VSAFLSE-TRSEVSATQQTEAE 740
Score = 76 (31.8 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 43/213 (20%), Positives = 88/213 (41%)
Query: 686 EESVAANNDRYSAPQSDAPEISRDVTK------EIEADIQVENVERPVDLYKAIFSDDSD 739
E V D A + ++++ V K E E + + E V +DL+KAIF+ SD
Sbjct: 738 EAEVKTQTDALPASATSEVKVAQSVEKQSDQKNEEEEEEEEEEVRPSMDLFKAIFASSSD 797
Query: 740 DEVETFNPKKVEDPEKKIE-VANTALSHLIAGDFLESLGKELGLEVPHESPPYPTSKAKN 798
++ + + + E+ E+ + A S +G + PP P
Sbjct: 798 EKSSSSSEDEAEEEEELAPPTSEAAQSTTTSGTVI---------------PPIPAQFTPA 842
Query: 799 PAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWMPDQRETAQEGKSQKNEFTPG 858
P + + ++ + + ST+++++ + + + D+ E + F P
Sbjct: 843 PDINKAMDLKHLTVQSVPSAETTAQSTQSSLNAPAKSQGL-DEEEFGP--RLPPPGFVPS 899
Query: 859 --NPLNVSDKYKETDKYKGEIGCERSKEDEKSK 889
+P K K+ +K+KG+ ++ K+ +KSK
Sbjct: 900 THSPQMKKQKKKDKEKHKGKKH-KKEKKKKKSK 931
Score = 58 (25.5 bits), Expect = 6.8e-33, Sum P(3) = 6.8e-33
Identities = 24/105 (22%), Positives = 41/105 (39%)
Query: 447 KLWEARQKRNDQTKLVSDGKSSETAQRLTAETRGKLLGERPLERSARDSSFSVGSENGIQ 506
+L E R+ Q S+ S+ + A + K + L + SS + Q
Sbjct: 449 RLTEIRKAAESQKPSESNLSSAVDRAVVVASAKAKAAALQALSSRFQSSSTQPQPPSETQ 508
Query: 507 IQFNLSDTFTKSASFNELPEVATPFQDDPAKQERFERFLKEKYQG 551
+ N T AS + PF +P KQ R++ ++ + QG
Sbjct: 509 MALNAWSGPTADAS-----KTFKPFSKNPQKQARYDLYISKLKQG 548
Score = 42 (19.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 244 DPYKNAPEFREKKRSRTSGHSKNGRTK 270
+ +K +EKK+ ++ H G+ K
Sbjct: 914 EKHKGKKHKKEKKKKKSKKHKHKGKQK 940
Score = 41 (19.5 bits), Expect = 9.5e-29, Sum P(3) = 9.5e-29
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 463 SDGK-SSETAQRLTAETRGKLLG-ERPLERSA-RDSSFSVGSENGIQIQFNLSDTFTKSA 519
SD K SS T R+TAE K + P++ S +D+ + SE ++
Sbjct: 684 SDPKPSSSTIPRVTAEASSKKSRWDVPVQASEPKDAVSAFLSETRSEVSATQQTEAEVKT 743
Query: 520 SFNELPEVAT 529
+ LP AT
Sbjct: 744 QTDALPASAT 753
Score = 38 (18.4 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 242 GYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGLKSGK 285
G+ P ++P+ +++K+ H K K S GK
Sbjct: 895 GFVPSTHSPQMKKQKKKDKEKHKGKKHKKEKKKKKSKKHKHKGK 938
>FB|FBgn0036386 [details] [associations]
symbol:CG8833 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] InterPro:IPR000467 Pfam:PF01585
PROSITE:PS50174 SMART:SM00443 EMBL:AE014296 GO:GO:0003676
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 eggNOG:NOG150083
KO:K13123 InterPro:IPR011666 Pfam:PF07713
GeneTree:ENSGT00390000007074 EMBL:BT081401 EMBL:AY061272
RefSeq:NP_648669.1 UniGene:Dm.3662 IntAct:Q9VUA0 MINT:MINT-914296
PaxDb:Q9VUA0 PRIDE:Q9VUA0 EnsemblMetazoa:FBtr0075792 GeneID:39535
KEGG:dme:Dmel_CG8833 UCSC:CG8833-RA FlyBase:FBgn0036386
InParanoid:Q9VUA0 OMA:FAPDDYE OrthoDB:EOG42Z355 PhylomeDB:Q9VUA0
GenomeRNAi:39535 NextBio:814152 Bgee:Q9VUA0 Uniprot:Q9VUA0
Length = 952
Score = 306 (112.8 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 92/287 (32%), Positives = 137/287 (47%)
Query: 4 DEEDYVF-FGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGRRRFHGAFTGG 62
DEE+++ FGTP+ ++ KK +A Q V DE G+RRFHGAFTGG
Sbjct: 2 DEEEHLHRFGTPLPALQKDVVPAKKPVAIED----------QIVKDENGKRRFHGAFTGG 51
Query: 63 FSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQ-SILNFLDEDEKAEFEGKSFGTSLQFD 121
FSAG++NTVGS EGWTPQTF SSR RA K Q +F+D+++ EF G + D
Sbjct: 52 FSAGFWNTVGSLEGWTPQTFKSSRGERASSKAQLKPEDFMDQEDLGEFGIAPQGIRTR-D 110
Query: 122 TFGSTAAEFARKQAEKEQQQRPS----AIPG-PAPDELVVPATESIGVKLLLKMGWRRGR 176
F + + R + + +P AIPG P ++L+ P + + V++L MGW+ G+
Sbjct: 111 EFANEDEQKQRSDQRRRKLMQPELGVGAIPGLPVLEQLLRPVRDKVAVRILKSMGWKPGQ 170
Query: 177 SIKDSLYDARREGRKALLAFSSDDAKTAFNDAE--PVDLEQSVNDDGQLSRCTPVYVLNP 234
+ R+E R+A S + AE P + E +D +
Sbjct: 171 GVGPR--QTRKEKRQATARNSKEQYLMEHYGAEGLPSNKENKGEEDSNNEDEDDEDITFA 228
Query: 235 KQDLHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKD-SLFG 280
D + Y P +N +R SK+ + A ++ +LFG
Sbjct: 229 PDDYEPIFYTPKENRFGMSYSGLNRDPILSKSSSSSAKPMQHINLFG 275
Score = 93 (37.8 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 28/109 (25%), Positives = 53/109 (48%)
Query: 616 EQVKDTQAEDLTNKKVYPRREEFQWRPSPILCKRFDLIDPYIG---KPPPAPRIKSKMDS 672
E+V+ Q + +K+ R + W+P+ +LCKR+++ +P+ G +P + K+K+
Sbjct: 573 EKVEQ-QEKPPEERKIVMERTKTMWKPTALLCKRYNIAEPFGGAMLEPEKELKAKAKISV 631
Query: 673 LIFISDSV--KAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQ 719
++ SV KA S+ + S P+ S + EA+IQ
Sbjct: 632 FDYLETSVNTKANFETPSIFPKHIEKSIPEKVETPPSPPPAPQPEAEIQ 680
Score = 83 (34.3 bits), Expect = 9.0e-28, Sum P(3) = 9.0e-28
Identities = 51/216 (23%), Positives = 85/216 (39%)
Query: 686 EESVAANNDRYSAPQSDAPEISRDVTKEIEADIQ--VENVERPVDLYKAIFSDDSDDEVE 743
EE+ + D+ + Q VT A Q + N P ++ ++FS D +
Sbjct: 729 EETELSEQDKLAILQES---FGLPVTSTTSAAAQNVLRNTSPPRGIFASLFSPKIKDAAK 785
Query: 744 TFNPKKVEDPE-KKIEVANTALSHLIAGDFLESLGKELGL-EVPHES---PPYPTSKAKN 798
P K E K+++A + D +EL + EV E P PT+ +
Sbjct: 786 EPAPTKFGPIEGSKLKIAYKPRKERLRND------RELAMAEVAPEDIYGPKLPTAPPQK 839
Query: 799 PAQKETSNANAGGNANILPVDNKSSST--RNAVSRTSIERWMPDQRETAQEGK--SQKNE 854
PA E ANI D++ ++A + E+W+ + + E S NE
Sbjct: 840 PAAPEIQ-----AEANI---DDRLQQLWQQHAPKKRKAEKWVEKKCISGSEDSDASSSNE 891
Query: 855 FTPGNPLNVSDKYKETDKYKGEIGCERSKEDEKSKL 890
+ + + +DK + K K SK+ +KSKL
Sbjct: 892 SSSSDSSDDNDKRSKLSKPKKSHKGSSSKKSKKSKL 927
Score = 69 (29.3 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 723 VERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLESLGKELGL 782
+ VDL+K+IF D ++E E K+ ++ + T+ + A + L + G+
Sbjct: 712 ISEKVDLFKSIFEDSDEEETELSEQDKLAILQESFGLPVTSTTSAAAQNVLRNTSPPRGI 771
Query: 783 EVPHESPPYPTSKAKNPA 800
SP + AK PA
Sbjct: 772 FASLFSPKIKDA-AKEPA 788
Score = 54 (24.1 bits), Expect = 1.3e-31, Sum P(4) = 1.3e-31
Identities = 29/109 (26%), Positives = 40/109 (36%)
Query: 440 GHDYYARKLWEARQKRNDQTKLVSDGKSSETAQRLTAETRGKLLGERPLERSARDSSFSV 499
G K E + KRN K S R T+G ++ E E+ +
Sbjct: 410 GEQQQEEKTAEEQPKRNP-FKDHSKSLMERINARTEGFTKGGVITENGEEQQTELAKEVK 468
Query: 500 GSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDPAKQERFERFLKEK 548
+ IQ + L SA N PF D AKQ R+E+F+ K
Sbjct: 469 EANAAIQERAALKTKDLPSA-MNS-SSAFKPFIADEAKQLRYEKFVSSK 515
Score = 44 (20.5 bits), Expect = 0.00087, Sum P(4) = 0.00087
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 314 DTYAEEDEEPSRLSKDVRKKLVGREQQ-DVLPG 345
D +A EDE+ R S R+KL+ E +PG
Sbjct: 110 DEFANEDEQKQR-SDQRRRKLMQPELGVGAIPG 141
>WB|WBGene00011109 [details] [associations]
symbol:R07E5.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0019915 "lipid storage"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174
SMART:SM00443 GO:GO:0009792 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0000003 GO:GO:0003676 GO:GO:0019915
eggNOG:NOG150083 KO:K13123 InterPro:IPR011666 Pfam:PF07713
EMBL:Z32683 PIR:S43604 RefSeq:NP_497893.1 ProteinModelPortal:Q21827
IntAct:Q21827 STRING:Q21827 PaxDb:Q21827 EnsemblMetazoa:R07E5.1
GeneID:175574 KEGG:cel:CELE_R07E5.1 UCSC:R07E5.1 CTD:175574
WormBase:R07E5.1 GeneTree:ENSGT00390000007074 HOGENOM:HOG000021380
InParanoid:Q21827 OMA:TAPKQYK NextBio:888734 Uniprot:Q21827
Length = 812
Score = 332 (121.9 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 87/240 (36%), Positives = 127/240 (52%)
Query: 44 QEV-TDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLD 102
+E+ TDE+G+RRFHGAFTGGFSAGY+NTVGSK+GW PQ F+SSR R E +Q +F+D
Sbjct: 32 EEIATDEKGKRRFHGAFTGGFSAGYWNTVGSKQGWVPQVFSSSRNERGEQIKQRAEDFMD 91
Query: 103 EDEKAEFEGKSFGTSLQFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVVPATESI 162
++ E+ G + Q FG A + RK A + S I D +V P + SI
Sbjct: 92 AEDLGEY-GIGNRSIKQTAAFGEGAGQ-KRKMAWERDTTSISTITQMFED-VVKPVSNSI 148
Query: 163 GVKLLLKMGWRRGRSIKDSLYDARREGRKALLAFSSDDAKTAFNDAEPV-DLEQSVNDDG 221
GV++L MGWR GR I L + +++ ++ S +A+ A V + N+D
Sbjct: 149 GVRMLRSMGWREGRGI--GLANVKQKQKRG---GESSEAQFDREQASKVAPAYEFSNEDA 203
Query: 222 QLSRCTPVYVLNPKQDLHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGL 281
+ + TP+ HG+GY + E RT+ K+G+ + IK FG+
Sbjct: 204 LVKQLTPL------TGTHGIGYQGLRKTTVLNESY-GRTTLALKSGKKNSKGIKGQAFGV 256
Score = 68 (29.0 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 35/130 (26%), Positives = 53/130 (40%)
Query: 635 REEFQWRPSPILCKRFDLIDPYIGKPPPAPRIKSKMDSLIFISDSVKAPRLEESVAANND 694
R+ F W P +L KRF++ PY G SD+V P L+++ D
Sbjct: 524 RQSFDWYPDNLLAKRFNVPHPYPG------------------SDTVGVPALQKTDWKRKD 565
Query: 695 RYSAPQSDAPEISRDVT-KEIEADIQV--ENVERPVDLYKAIFSDDSDDEVETFNPKKVE 751
R + + + T EIE ++ +R + K SDD DDE E + E
Sbjct: 566 RLADIGGVSATLGLPNTANEIEMRERLLKSRAQRGAEEKKRNQSDD-DDEKEYDDKDSDE 624
Query: 752 DPEKKIEVAN 761
+ E + E N
Sbjct: 625 EEENEAEPNN 634
Score = 48 (22.0 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 22/84 (26%), Positives = 31/84 (36%)
Query: 472 QRLTAETRGKLLGE---RPLERSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVA 528
+ + AE R K LGE LE + S + I+ N + E E
Sbjct: 344 KHMNAEQRAKFLGEDRVNALEIGGKSSKKPTERRSRWDIKANEVEKRDNERGGGEAEEDR 403
Query: 529 T-------PFQDDPAKQERFERFL 545
F D+P +Q RF+ FL
Sbjct: 404 DRRQRNRIEFPDEPMRQARFKEFL 427
Score = 40 (19.1 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 865 DKYKETDKYKGEIGCERSKEDEKSK 889
DK KE +K K ++SK+++K+K
Sbjct: 767 DK-KEKEKKKKSKKSKKSKKEKKTK 790
Score = 40 (19.1 bits), Expect = 5.1e-26, Sum P(3) = 5.1e-26
Identities = 33/174 (18%), Positives = 66/174 (37%)
Query: 709 DVTKEIEADIQVENVER-PVDLYKAIFSDDSDDEVETFNPKKVEDPEK-KIEVANTALSH 766
D +E EA+ + V++ P + IF D + + N + E EK + E+
Sbjct: 623 DEEEENEAEPNNQKVDKAPKSFFDFIFGDGDGADSDESNSEDEEAEEKERQEILKKREED 682
Query: 767 LIAG-DFLESLGKELGLEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSS-- 823
L + +E +E V E + +N S + I+ + SS
Sbjct: 683 LKRRREIVEKKEEENRKRVEKE-----LKELENRDLLRVSKQQEDDDIQIIDETSASSFG 737
Query: 824 -----STRNAVSRTSIERWMPDQRETAQEGKSQKNEFTPGNPLNVSDKYKETDK 872
S++ +S+T + + + + ++ K +K + S K K+T +
Sbjct: 738 PALPPSSKPVLSKTEVLKLLEKNMKKKKKDKKEKEKKKKSKKSKKSKKEKKTKR 791
Score = 39 (18.8 bits), Expect = 5.5e-26, Sum P(4) = 5.5e-26
Identities = 20/110 (18%), Positives = 55/110 (50%)
Query: 619 KDTQAEDLTNKKVYPRREEFQWRPSPILCKRFDLIDPYIGKPPPAPRIKSKMDSLIFISD 678
+D +AE+ +++ +REE R I+ K+ + + K ++++ L+ +S
Sbjct: 663 EDEEAEEKERQEILKKREEDLKRRREIVEKKEEENRKRVEKE--LKELENR--DLLRVSK 718
Query: 679 SVKAPRLE--ESVAANNDRYSAPQSDAPEISR-DVTKEIEADIQVENVER 725
+ ++ + +A++ + P S P +S+ +V K +E +++ + ++
Sbjct: 719 QQEDDDIQIIDETSASSFGPALPPSSKPVLSKTEVLKLLEKNMKKKKKDK 768
>UNIPROTKB|Q21827 [details] [associations]
symbol:R07E5.1 "G patch domain-containing protein 1
homolog" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000467 Pfam:PF01585
PROSITE:PS50174 SMART:SM00443 GO:GO:0009792 GO:GO:0040010
GO:GO:0002119 GO:GO:0010171 GO:GO:0000003 GO:GO:0003676
GO:GO:0019915 eggNOG:NOG150083 KO:K13123 InterPro:IPR011666
Pfam:PF07713 EMBL:Z32683 PIR:S43604 RefSeq:NP_497893.1
ProteinModelPortal:Q21827 IntAct:Q21827 STRING:Q21827 PaxDb:Q21827
EnsemblMetazoa:R07E5.1 GeneID:175574 KEGG:cel:CELE_R07E5.1
UCSC:R07E5.1 CTD:175574 WormBase:R07E5.1
GeneTree:ENSGT00390000007074 HOGENOM:HOG000021380 InParanoid:Q21827
OMA:TAPKQYK NextBio:888734 Uniprot:Q21827
Length = 812
Score = 332 (121.9 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 87/240 (36%), Positives = 127/240 (52%)
Query: 44 QEV-TDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLD 102
+E+ TDE+G+RRFHGAFTGGFSAGY+NTVGSK+GW PQ F+SSR R E +Q +F+D
Sbjct: 32 EEIATDEKGKRRFHGAFTGGFSAGYWNTVGSKQGWVPQVFSSSRNERGEQIKQRAEDFMD 91
Query: 103 EDEKAEFEGKSFGTSLQFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVVPATESI 162
++ E+ G + Q FG A + RK A + S I D +V P + SI
Sbjct: 92 AEDLGEY-GIGNRSIKQTAAFGEGAGQ-KRKMAWERDTTSISTITQMFED-VVKPVSNSI 148
Query: 163 GVKLLLKMGWRRGRSIKDSLYDARREGRKALLAFSSDDAKTAFNDAEPV-DLEQSVNDDG 221
GV++L MGWR GR I L + +++ ++ S +A+ A V + N+D
Sbjct: 149 GVRMLRSMGWREGRGI--GLANVKQKQKRG---GESSEAQFDREQASKVAPAYEFSNEDA 203
Query: 222 QLSRCTPVYVLNPKQDLHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGL 281
+ + TP+ HG+GY + E RT+ K+G+ + IK FG+
Sbjct: 204 LVKQLTPL------TGTHGIGYQGLRKTTVLNESY-GRTTLALKSGKKNSKGIKGQAFGV 256
Score = 68 (29.0 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 35/130 (26%), Positives = 53/130 (40%)
Query: 635 REEFQWRPSPILCKRFDLIDPYIGKPPPAPRIKSKMDSLIFISDSVKAPRLEESVAANND 694
R+ F W P +L KRF++ PY G SD+V P L+++ D
Sbjct: 524 RQSFDWYPDNLLAKRFNVPHPYPG------------------SDTVGVPALQKTDWKRKD 565
Query: 695 RYSAPQSDAPEISRDVT-KEIEADIQV--ENVERPVDLYKAIFSDDSDDEVETFNPKKVE 751
R + + + T EIE ++ +R + K SDD DDE E + E
Sbjct: 566 RLADIGGVSATLGLPNTANEIEMRERLLKSRAQRGAEEKKRNQSDD-DDEKEYDDKDSDE 624
Query: 752 DPEKKIEVAN 761
+ E + E N
Sbjct: 625 EEENEAEPNN 634
Score = 48 (22.0 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 22/84 (26%), Positives = 31/84 (36%)
Query: 472 QRLTAETRGKLLGE---RPLERSARDSSFSVGSENGIQIQFNLSDTFTKSASFNELPEVA 528
+ + AE R K LGE LE + S + I+ N + E E
Sbjct: 344 KHMNAEQRAKFLGEDRVNALEIGGKSSKKPTERRSRWDIKANEVEKRDNERGGGEAEEDR 403
Query: 529 T-------PFQDDPAKQERFERFL 545
F D+P +Q RF+ FL
Sbjct: 404 DRRQRNRIEFPDEPMRQARFKEFL 427
Score = 40 (19.1 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 865 DKYKETDKYKGEIGCERSKEDEKSK 889
DK KE +K K ++SK+++K+K
Sbjct: 767 DK-KEKEKKKKSKKSKKSKKEKKTK 790
Score = 40 (19.1 bits), Expect = 5.1e-26, Sum P(3) = 5.1e-26
Identities = 33/174 (18%), Positives = 66/174 (37%)
Query: 709 DVTKEIEADIQVENVER-PVDLYKAIFSDDSDDEVETFNPKKVEDPEK-KIEVANTALSH 766
D +E EA+ + V++ P + IF D + + N + E EK + E+
Sbjct: 623 DEEEENEAEPNNQKVDKAPKSFFDFIFGDGDGADSDESNSEDEEAEEKERQEILKKREED 682
Query: 767 LIAG-DFLESLGKELGLEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSS-- 823
L + +E +E V E + +N S + I+ + SS
Sbjct: 683 LKRRREIVEKKEEENRKRVEKE-----LKELENRDLLRVSKQQEDDDIQIIDETSASSFG 737
Query: 824 -----STRNAVSRTSIERWMPDQRETAQEGKSQKNEFTPGNPLNVSDKYKETDK 872
S++ +S+T + + + + ++ K +K + S K K+T +
Sbjct: 738 PALPPSSKPVLSKTEVLKLLEKNMKKKKKDKKEKEKKKKSKKSKKSKKEKKTKR 791
Score = 39 (18.8 bits), Expect = 5.5e-26, Sum P(4) = 5.5e-26
Identities = 20/110 (18%), Positives = 55/110 (50%)
Query: 619 KDTQAEDLTNKKVYPRREEFQWRPSPILCKRFDLIDPYIGKPPPAPRIKSKMDSLIFISD 678
+D +AE+ +++ +REE R I+ K+ + + K ++++ L+ +S
Sbjct: 663 EDEEAEEKERQEILKKREEDLKRRREIVEKKEEENRKRVEKE--LKELENR--DLLRVSK 718
Query: 679 SVKAPRLE--ESVAANNDRYSAPQSDAPEISR-DVTKEIEADIQVENVER 725
+ ++ + +A++ + P S P +S+ +V K +E +++ + ++
Sbjct: 719 QQEDDDIQIIDETSASSFGPALPPSSKPVLSKTEVLKLLEKNMKKKKKDK 768
>UNIPROTKB|F1NI35 [details] [associations]
symbol:GPATCH1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0003676 GO:GO:0071013 InterPro:IPR011666 Pfam:PF07713
GeneTree:ENSGT00390000007074 EMBL:AADN02031710 EMBL:AADN02031711
IPI:IPI00595072 Ensembl:ENSGALT00000039393 ArrayExpress:F1NI35
Uniprot:F1NI35
Length = 257
Score = 324 (119.1 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 95/253 (37%), Positives = 140/253 (55%)
Query: 2 DSDEEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGAFT 60
D +EED V +GT ++ +E R KK + L+ +Q V D +GR +RFHGAFT
Sbjct: 7 DGEEEDLVNYGTALQPLQE-GERIKKPVP-----LQ-----EQTVKDAKGRYQRFHGAFT 55
Query: 61 GGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQF 120
GGFSAGY+NTVG+KEGWTP F SSR+ RA+ +F+DE++ +EF G +
Sbjct: 56 GGFSAGYFNTVGTKEGWTPSAFISSRQKRADRTVLGPEDFMDEEDLSEF-GIAPRDITTT 114
Query: 121 DTFGSTAAEFARKQAEKEQQQRPSAIPGPAP-DELVVPATESIGVKLLLKMGWRRGRSIK 179
D F S A + +++A ++ +AIPG + D+L+ P+ +IGV+LL KMGW+ G+ I
Sbjct: 115 DDFASKAKDRIKEKA-RQIAGVVAAIPGTSAFDDLIGPSKITIGVELLRKMGWKEGQGIG 173
Query: 180 DSLYDARREGRKALLAFSSDDAKTAFNDAEPVDLEQSVNDDG---QLSRCT--PVYV--- 231
+ +R+ R+ D + A P L + D+ Q T P V
Sbjct: 174 PRV---KRKPRRQ----KPDPEVKIYGCALPPGLSEGSEDEEDEYQPENVTFAPKDVMPV 226
Query: 232 -LNPKQDLHGLGY 243
L PK+++HGLGY
Sbjct: 227 DLTPKENVHGLGY 239
>ASPGD|ASPL0000059796 [details] [associations]
symbol:AN1172 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000467
Pfam:PF01585 PROSITE:PS50174 SMART:SM00443 EMBL:AACD01000016
EMBL:BN001308 GO:GO:0003676 eggNOG:NOG150083 KO:K13123
InterPro:IPR011666 Pfam:PF07713 OrthoDB:EOG40VZXR
RefSeq:XP_658776.1 EnsemblFungi:CADANIAT00001454 GeneID:2876948
KEGG:ani:AN1172.2 HOGENOM:HOG000207363 OMA:TTEERGM Uniprot:Q5BE58
Length = 734
Score = 324 (119.1 bits), Expect = 8.2e-28, Sum P(4) = 8.2e-28
Identities = 70/139 (50%), Positives = 92/139 (66%)
Query: 42 WKQEVTDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRA-EVKQQSILNF 100
WKQEVTD+ GR+R HGAFTGGFSAGY+NTVGSKEGWTP TF SSR+NRA + ++Q +F
Sbjct: 45 WKQEVTDDRGRKRLHGAFTGGFSAGYFNTVGSKEGWTPATFVSSRQNRAKDARKQRAEDF 104
Query: 101 LDEDEKAEFE-GKSFGTSLQFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVVPAT 159
+DE++ E E ++ T+ +F FGSTA + R+ G D + +
Sbjct: 105 MDEEDIREAEESRNLQTNNEFSGFGSTATDSLRR--------------GGLMD-IFKTSG 149
Query: 160 ESIGVKLLLKMGWRRGRSI 178
E++GVKLL KMGWR G+ I
Sbjct: 150 ETVGVKLLKKMGWREGQGI 168
Score = 56 (24.8 bits), Expect = 8.2e-28, Sum P(4) = 8.2e-28
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 691 ANNDRYSAPQSDAPEISRDVTKEIEADI-QVENVERPVD-LYKAIFSDDSDDE 741
A + R + AP S IEAD + ERP + ++KAIF D +DE
Sbjct: 678 APSSRGDSAMRAAPGPSPTAPVVIEADRNEALEGERPGEAVFKAIFGSDDEDE 730
Score = 50 (22.7 bits), Expect = 8.2e-28, Sum P(4) = 8.2e-28
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 530 PFQDDPAKQERFERFLKEKYQGGLRST 556
P+ +D +K+ R+ FL+ + GLR T
Sbjct: 487 PYSEDESKRTRYRTFLE--IRAGLRDT 511
Score = 45 (20.9 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 24/95 (25%), Positives = 37/95 (38%)
Query: 783 EVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWM-PDQ 841
E+P + T + A S A A + + PV + + + SI WM P+
Sbjct: 367 EIPKDWKSKKTPVKERDAASYVSTAEAARASTLDPVSRAAILGEDQLPAKSIFDWMTPEG 426
Query: 842 RETAQE--GKSQK----NEFTP-GNPLNVSDKYKE 869
R E GK+ E P G L+ S + K+
Sbjct: 427 RAKIAELTGKTDLPPALGEKAPKGYELSESQRQKD 461
Score = 44 (20.5 bits), Expect = 8.2e-28, Sum P(4) = 8.2e-28
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 635 REEFQWRPSPILCKRFDLIDP-YIGKPPPAP 664
R + P+ +LCKRF++ P ++ P P
Sbjct: 597 RTVISFYPTRLLCKRFNVKPPSHVQVDPGDP 627
Score = 39 (18.8 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 451 ARQKRNDQTKLVSDGKSSETAQRLTAETRGKLLGERPLE 489
A R D + G S + A+ L GERP E
Sbjct: 678 APSSRGDSAMRAAPGPSPTAPVVIEADRNEALEGERPGE 716
>UNIPROTKB|G4MY58 [details] [associations]
symbol:MGG_11240 "G patch domain-containing protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000467 Pfam:PF01585
PROSITE:PS50174 SMART:SM00443 GO:GO:0003676 EMBL:CM001232 KO:K13123
InterPro:IPR011666 Pfam:PF07713 RefSeq:XP_003714196.1
EnsemblFungi:MGG_11240T0 GeneID:5051208 KEGG:mgr:MGG_11240
Uniprot:G4MY58
Length = 715
Score = 291 (107.5 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 67/142 (47%), Positives = 85/142 (59%)
Query: 42 WKQEVTDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWTPQTFTSSRKNR----AEVKQQSI 97
WKQEV DE GR+R HGAFTGGFSAGY+NTVGSKEGWTP TF SSR NR ++ QQ
Sbjct: 45 WKQEVRDERGRKRLHGAFTGGFSAGYFNTVGSKEGWTPSTFVSSRTNRRKDDTKLNQQRP 104
Query: 98 LNFLDEDEKAEFE-GKSFGTSLQFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVV 156
+F+DE++ A+ E + T+ F GST + AR + + G L
Sbjct: 105 EDFMDEEDLADAEESRKLQTNQAFAALGSTEDDVARS----------AGLAG-----LFR 149
Query: 157 PATESIGVKLLLKMGWRRGRSI 178
E++G KLL KMGW+ G+ I
Sbjct: 150 VEGETMGTKLLKKMGWKEGQGI 171
Score = 92 (37.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 64/301 (21%), Positives = 114/301 (37%)
Query: 460 KLVSDGKSSETAQRLTAETRGKLLGERPLERSARDSSFSVGSENGIQIQFNLSDTFTKSA 519
K V D S+ +RL + T GK + P R +++++ +E+ + T K+
Sbjct: 421 KSVFDFMSTSARERLVSAT-GKK--DLPEARGEIPAAYAMSAEDKLAELLKDVPTLDKAT 477
Query: 520 SFNELPEVAT---PFQDDPAKQERFERFLKEKYQGGLRSTDXXXXXXXXXXXXXXXXLDF 576
+ L A+ P+ D+ K++R+ +L+ YQ G R + +F
Sbjct: 478 AVAALARGASGGAPYADNEDKRKRYRAYLE--YQAGSRQSLPPKPAGVKDDDWLREFYEF 535
Query: 577 XXXXXXXXXXXXXXXGSISTEQLLGSSGAGRMLFTSGGL----EQVKDTQ-AEDLTNKKV 631
+T + + A L G K T AE+ +
Sbjct: 536 FNCARIFKPMTGFMASRFTTSKSSSTVPATNKLNGDGNALITRPAPKPTDPAEEAAKLGM 595
Query: 632 Y-PR-REEFQWRPSPILCKRFDLIDPYIGKPPP------AP-RIKSKMDSLIFISDSVKA 682
+ P R + P+ +LCKRF++ P + +P AP +K + V+A
Sbjct: 596 FGPMTRSVKDFYPNRLLCKRFNVKPPVVVEPDAELGFGSAPLSVKQDYSQFAGLYRDVEA 655
Query: 683 PRLEE--SVAANNDRYSAPQSDAPEISRDVTKEIEADIQVENVERPVDLYKAIFSDDSDD 740
++ S+ A + P I V + A + E +++KAIF D SDD
Sbjct: 656 GSQDDVKSIDATAAITGVAAENKPPIKAAVDPDTNAAL--EQARAGEEVFKAIFGDTSDD 713
Query: 741 E 741
+
Sbjct: 714 D 714
>DICTYBASE|DDB_G0281261 [details] [associations]
symbol:DDB_G0281261 "putative G-patch-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0281261 EMBL:AAFI02000040 eggNOG:NOG150083 KO:K13123
InterPro:IPR011666 Pfam:PF07713 RefSeq:XP_640918.5
EnsemblProtists:DDB0233783 GeneID:8622981 KEGG:ddi:DDB_G0281261
OMA:LDPFSQF Uniprot:Q54U58
Length = 1113
Score = 217 (81.4 bits), Expect = 4.9e-19, Sum P(5) = 4.9e-19
Identities = 58/142 (40%), Positives = 72/142 (50%)
Query: 43 KQEVTDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSIL--NF 100
KQEV DE GR+R HGAFTGGFSAGY+N+VGSKEGWTP TF SS+ R Q + +F
Sbjct: 72 KQEVMDESGRKR-HGAFTGGFSAGYFNSVGSKEGWTPSTFKSSKTERVSNNIQPLKPEDF 130
Query: 101 LDEDEKAEFEGKSFGTSLQFDTFGSTAAEFARKQAEKEQQQR-----------PSAIPGP 149
+DE++ K T F+ F S F S
Sbjct: 131 MDEEDLTH-RAKELTTHSDFNYF-SGLGSFGNDNDNNNNNNNLDSNNLNTNNLKSLFNEG 188
Query: 150 APDELVVPATESIGVKLLLKMG 171
+ + +V + ESIGVKLL MG
Sbjct: 189 SNNNIVEASKESIGVKLLKLMG 210
Score = 84 (34.6 bits), Expect = 4.9e-19, Sum P(5) = 4.9e-19
Identities = 50/233 (21%), Positives = 94/233 (40%)
Query: 660 PPPAPRIKSKMDSLIFISDSVKAPRLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQ 719
P P+P ++S S +V A A N +D +S T E + Q
Sbjct: 766 PSPSPILQSSSSPT---STTVTAASTLNMTAQLNLEELFGNNDQYNVS---TFESNGEFQ 819
Query: 720 VENVERP-VDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGDFLESLGK 778
V+ +RP +DL+KAIF +SDD+ + +K+E P ++ S + D + K
Sbjct: 820 VKEAKRPPIDLFKAIF--ESDDK-QNGEDQKME-PMSDDQL--DPFSSFLKQDQQQQQKK 873
Query: 779 ELGLEVPHESPPYPTSKAKNPAQKETSNANAGGNANILPVDNKSSSTRNAVSRTSIERWM 838
P K Q++ + + A+ L D + + + ++
Sbjct: 874 NKESNGDELDPFSAFLKQDQKQQEQKQDGSLDPFASFLKQDQQQQQKQQDNTLDPFSSFL 933
Query: 839 P-DQRETAQEGKSQ-KNEFTPGNPLNVSDKYKETDKYKGEIGCERSKEDEKSK 889
DQ++ QE K Q K +P + + + K + ++ E+ K+++K +
Sbjct: 934 KQDQKQKEQEQKQQTKESISPLLKSIIKELNEPLSKEEKKLKKEQKKKEKKER 986
Score = 61 (26.5 bits), Expect = 4.9e-19, Sum P(5) = 4.9e-19
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 610 FTSGGLEQVKDTQAEDLTNK-KVYPRREEFQWRPSPILCKRFDLIDPY 656
F S + +D NK K ++ +W P +LC+RF++ PY
Sbjct: 654 FVSSSSSSSTSNENKDNNNKLKTKSKKLIEKWVPELLLCRRFNVEPPY 701
Score = 48 (22.0 bits), Expect = 4.9e-19, Sum P(5) = 4.9e-19
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 232 LNPKQDLHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGL 281
+ K +++G+GY+P ++ R + + S +K+ SI FGL
Sbjct: 343 IRQKNNVYGVGYEPSEDVKNMRFQNQKSNSNRVSMDSSKS-SIGS--FGL 389
Score = 48 (22.0 bits), Expect = 1.8e-15, Sum P(5) = 1.8e-15
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 712 KEIEADIQVENVERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKK 756
KE E + VENV+ Y + FSD SD +T + D E++
Sbjct: 998 KEQEKEEWVENVKS----YLSQFSDISDSSSDTDSSSDDSDYERR 1038
Score = 44 (20.5 bits), Expect = 1.3e-15, Sum P(6) = 1.3e-15
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 835 ERWMPDQRETAQEGKSQKNEFTPG--NPLN----VSDKYKETDKYKGEIGCERSKEDEKS 888
ER ++RE ++ + +K E+ + L+ +SD +TD + ER K ++
Sbjct: 985 ERKRKEKREKKEKKEQEKEEWVENVKSYLSQFSDISDSSSDTDSSSDDSDYERRKRRKEK 1044
Query: 889 K 889
K
Sbjct: 1045 K 1045
Score = 43 (20.2 bits), Expect = 1.3e-15, Sum P(6) = 1.3e-15
Identities = 17/84 (20%), Positives = 34/84 (40%)
Query: 750 VEDPEKKIEVANTALSHLIAGDFLESLGKELGLEVPHESPPYPTSKAKNPAQKETSNANA 809
VE P + EV N + + +L + ++ P T + +P Q+ ++ N+
Sbjct: 697 VEPPYSREEVENFKIEKQLKQKSSNDWKSKLNIPTHYQIPFDATFETNSPTQQNSNIRNS 756
Query: 810 GGNANILPVDNKSSSTRNAVSRTS 833
A + S +++ S TS
Sbjct: 757 IPTATTQSSPSPSPILQSSSSPTS 780
Score = 42 (19.8 bits), Expect = 1.6e-12, Sum P(5) = 1.6e-12
Identities = 15/70 (21%), Positives = 33/70 (47%)
Query: 686 EESVAANNDRYSAPQSDAPEISRDVTKEIEADIQVENVERPVDLYKAIFSDDSDDEV-ET 744
E S N R+ +S++ +S D +K + +E D ++ +++ D++ +T
Sbjct: 355 EPSEDVKNMRFQNQKSNSNRVSMDSSKSSIGSFGLGALEDDDDKGFDLYGNENHDDIYDT 414
Query: 745 --FNPKKVED 752
F+ K+ D
Sbjct: 415 GLFDKKRERD 424
Score = 41 (19.5 bits), Expect = 4.1e-13, Sum P(5) = 4.1e-13
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 819 DNKSSSTR-NAVSRTSIERWMPD 840
+NK ++ + S+ IE+W+P+
Sbjct: 666 ENKDNNNKLKTKSKKLIEKWVPE 688
Score = 41 (19.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 841 QRETAQEGKSQKNEFTPGNPLNVSDKYKETDKYKGEIGCERS 882
Q T + N F G+ +V + + D + E G E +
Sbjct: 286 QNTTTNNNNNNNNTFDNGDNEDVDESDESDDNEEDETGDEEA 327
Score = 40 (19.1 bits), Expect = 4.9e-19, Sum P(5) = 4.9e-19
Identities = 21/95 (22%), Positives = 39/95 (41%)
Query: 427 QSNPLFSFLTGGNGHDYYARKLWE-ARQKRNDQTKLVSDGKSSETAQRLTAETRGKLLGE 485
Q P S + GN L + R+ R ++ L G + Q L + + + E
Sbjct: 567 QPQPQQSIINSGNIIKESMEYLMDPGRRLRFNEYILDKQGDKNLKEQSLINYSSYRDISE 626
Query: 486 RPLERSARDSSFSVGSENGIQIQFNLSDTFTKSAS 520
+E+ + F +++ +Q L+D F S+S
Sbjct: 627 --IEKEKENKVFERYAQSFSPLQSKLNDRFVSSSS 659
Score = 40 (19.1 bits), Expect = 4.1e-13, Sum P(5) = 4.1e-13
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 794 SKAKNPAQKETSNANAGGNANILPVDNK 821
+K K+ +N N+G + P+DNK
Sbjct: 434 NKIKSNNNNNNNNNNSGIVDFLRPIDNK 461
>POMBASE|SPAC20H4.06c [details] [associations]
symbol:SPAC20H4.06c "RNA-binding protein" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
PomBase:SPAC20H4.06c GO:GO:0005829 GO:GO:0005634 EMBL:CU329670
GO:GO:0003723 eggNOG:NOG150083 KO:K13123 InterPro:IPR011666
Pfam:PF07713 RefSeq:NP_593626.1 EnsemblFungi:SPAC20H4.06c.1
GeneID:2542000 KEGG:spo:SPAC20H4.06c OrthoDB:EOG40VZXR
NextBio:20803081 Uniprot:Q9HE07
Length = 534
Score = 229 (85.7 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 50/117 (42%), Positives = 68/117 (58%)
Query: 1 MDSDEEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGRRRFHGAFT 60
+D YV +G+P + E SR + + WKQE DE R+RFHGAFT
Sbjct: 11 VDVHRHPYVVYGSPFDLEP---SRINQGVPV----------WKQEARDERNRKRFHGAFT 57
Query: 61 GGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTS 117
GGFSAGY+NTVGSKEGW P+++ SSR V +I + +DE+++A+ E TS
Sbjct: 58 GGFSAGYFNTVGSKEGWQPKSWKSSRNENKSVHGMTIDDIMDEEDRADQELSKVYTS 114
Score = 48 (22.0 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 642 PSPILCKRFDLIDPYIGKPPPAPRIKSKMDSLIFISD 678
P +LCKRF++ PY G+ + S ++++ I++
Sbjct: 461 PERLLCKRFNVALPY-GQEKQKRKNISSIENVPIIAE 496
Score = 43 (20.2 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 717 DIQVENVERPVDLYKAIFSDD 737
DI+ E + P L+ AIF DD
Sbjct: 515 DIE-EKPKAPQTLFSAIFGDD 534
Score = 42 (19.8 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 160 ESIGVKLLLKMGW 172
+SIG K+L +GW
Sbjct: 138 DSIGEKMLKNLGW 150
Score = 39 (18.8 bits), Expect = 6.4e-15, Sum P(3) = 6.4e-15
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 720 VENVERPVDLYKAIFSDDSDDEVETFNPKKVEDPEKKIEVANTALSHLIAGD 771
+ENV P+ A + S D ++T + +D E+K + T S + D
Sbjct: 488 IENV--PII---AEIENKSIDSIDTRKLNRPQDIEEKPKAPQTLFSAIFGDD 534
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.130 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 988 820 0.00078 122 3 11 23 0.50 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 615 (65 KB)
Total size of DFA: 360 KB (2178 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 86.63u 0.13s 86.76t Elapsed: 00:00:04
Total cpu time: 86.64u 0.13s 86.77t Elapsed: 00:00:04
Start: Tue May 21 12:19:28 2013 End: Tue May 21 12:19:32 2013