BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001970
(988 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24K12|GPTC1_BOVIN G patch domain-containing protein 1 OS=Bos taurus GN=GPATCH1 PE=2
SV=1
Length = 931
Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 211/716 (29%), Positives = 314/716 (43%), Gaps = 150/716 (20%)
Query: 1 MDSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGA 58
+DSD +ED V +GT +E EE R KK I Q V DE+GR +RFHGA
Sbjct: 4 LDSDSDEDLVSYGTGLEPLEE-GERPKKPIPLQD----------QTVRDEKGRYKRFHGA 52
Query: 59 FTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSL 118
F+GGFSAGY+NTVGSKEGWTP +F SSR+NRA+ +F+DE++ +EF G + + +
Sbjct: 53 FSGGFSAGYFNTVGSKEGWTPSSFVSSRQNRADKSVLGPEDFMDEEDLSEF-GIAPKSIV 111
Query: 119 QFDTFGSTAAEFARKQAEKEQQQRPSAIPGPA-PDELVVPATESIGVKLLLKMGWRRGRS 177
D F S + R++A ++ + IPG D+L+ PA S+G +LL KMGW+ G+
Sbjct: 112 TTDDFASKTKDRIREKA-RQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQG 170
Query: 178 IKDSLYDARREGRK-----------ALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRC 226
I + RR R+ AL S+ ++ +D P ++ + D
Sbjct: 171 IGPRV--KRRPRRQKPDPGVKIYGCALPPGGSEGSEDEDDDYLPENVTFAPKD------V 222
Query: 227 TPVYVLNPKQDLHGLGY---DPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLF---- 279
TPV PK ++HGL Y DP++ TSG N + L
Sbjct: 223 TPVD-FTPKDNVHGLAYKGLDPHQAL--------FGTSGEHFNLFSGGPEETGDLLGDIG 273
Query: 280 ---GLKSGKVAPGFGIGALEEYDAEDEDLYGADYEFVDTYAEEDEEPS------------ 324
G K G FG+GALEE ED+D+Y + +DEEP
Sbjct: 274 VNKGRKLGISGQAFGVGALEE---EDDDIYATETLSKYDTVLKDEEPGDGLYGWTAPRQY 330
Query: 325 RLSKDVRKKL--VGREQQDVLPGFILASKSDYQLERFDPPVVPKDFVPHHKFPGPLETDS 382
+ K+ K L VG+ +L GF LASK + + PP +P+D+ P H F
Sbjct: 331 KSQKESEKDLCYVGK----ILDGFSLASKPLSSKKIYPPPELPRDYRPVHYF-------- 378
Query: 383 KLAVPLPPEIPPPEDNNLKLLIEGVATLVARCGKLFEDI-SREKNQSNP-----LFSFLT 436
P + +N+ L + L GK D +R ++Q N L
Sbjct: 379 ------RPVVAATSENSHLLQV-----LSESAGKPTNDPGTRSRHQLNACKRGELLGETP 427
Query: 437 GGNGHDYYARKLWEARQKRNDQTKLVSDGKSSETAQRLTAETRGKLLGER--PLERSARD 494
L + ++R + K +D K+++ R A++ G R PL
Sbjct: 428 IQGAPTSVLEFLSQKDKERLKEVKQATDLKAAQLRARSLAQSAS---GSRPQPLSPDVGH 484
Query: 495 SSFSVGSENGIQIQFNLSDTFTKSASFNELPEVATPFQDDPAKQERFERFLKEKYQGGLR 554
S+ + G+ T++++F PF DP KQ+R+E FL +G
Sbjct: 485 CSWHMALSGGM--------ASTRTSNFK-------PFAKDPEKQKRYEEFLANMKRGQKD 529
Query: 555 STDSGGASAMSEAARARERLDFEAAAEAIEKAKQRKEGSISTEQLLGSSGAGRMLFTSGG 614
+ + M+E R RER +F AA S+ L S FT
Sbjct: 530 ALERCLDPGMTEWERGRERDEFARAALLY----------ASSHSTLSSR------FTHAQ 573
Query: 615 LE------QVKDTQAEDLTNK------KVYPR--REEFQWRPSPILCKRFDLIDPY 656
E +V Q D+++K K++ + R+ F+W P +LCKRF++ DPY
Sbjct: 574 EEDDSEQVEVPRDQENDVSDKQSAVKMKMFGKLTRDTFEWHPDKLLCKRFNVPDPY 629
>sp|Q9BRR8|GPTC1_HUMAN G patch domain-containing protein 1 OS=Homo sapiens GN=GPATCH1 PE=1
SV=1
Length = 931
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 203/405 (50%), Gaps = 64/405 (15%)
Query: 2 DSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGAF 59
DSD EED V +GT +E EE R KK I Q V DE+GR +RFHGAF
Sbjct: 5 DSDSEEDLVSYGTGLEPLEE-GERPKKPIPLQD----------QTVRDEKGRYKRFHGAF 53
Query: 60 TGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQ 119
+GGFSAGY+NTVGSKEGWTP TF SSR+NRA+ +F+DE++ +EF G + +
Sbjct: 54 SGGFSAGYFNTVGSKEGWTPSTFVSSRQNRADKSVLGPEDFMDEEDLSEF-GIAPKAIVT 112
Query: 120 FDTFGSTAAEFARKQAEKEQQQRPSAIPGPA-PDELVVPATESIGVKLLLKMGWRRGRSI 178
D F S + R++A ++ + IPG D+L+ PA S+G +LL KMGW+ G+ +
Sbjct: 113 TDDFASKTKDRIREKA-RQLAAATAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQGV 171
Query: 179 KDSLYDARREGRK-----------ALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCT 227
+ RR R+ AL SS+ ++ +D P ++ + D T
Sbjct: 172 GPRV--KRRPRRQKPDPGVKIYGCALPPGSSEGSEGEDDDYLPDNVTFAPKD------VT 223
Query: 228 PVYVLNPKQDLHGLGY---DPYKNAPEFREKKRSRTSGHS-KNGRTKALSIKDSLFGLKS 283
PV PK ++HGL Y DP++ + + SG S + G + + G K
Sbjct: 224 PVD-FTPKDNVHGLAYKGLDPHQALFGTSGEHFNLFSGGSERAGDLGEIGLNK---GRKL 279
Query: 284 GKVAPGFGIGALEEYDAEDEDLYGADYEFVDTYAEEDEEPS------------RLSKDVR 331
G FG+GALEE ED+D+Y + +DEEP + K+
Sbjct: 280 GISGQAFGVGALEE---EDDDIYATETLSKYDTVLKDEEPGDGLYGWTAPRQYKNQKESE 336
Query: 332 KKL--VGREQQDVLPGFILASKSDYQLERFDPPVVPKDFVPHHKF 374
K L VG+ +L GF LASK + + PP +P+D+ P H F
Sbjct: 337 KDLRYVGK----ILDGFSLASKPLSSKKIYPPPELPRDYRPVHYF 377
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 30/141 (21%)
Query: 530 PFQDDPAKQERFERFLKEKYQGGLRSTDSGGASAMSEAARARERLDFEAAAEAIEKAKQR 589
PF DP KQ+R++ FL QG + + +M+E R RER +F AA
Sbjct: 505 PFAKDPEKQKRYDEFLVHMKQGQKDALERCLDPSMTEWERGRERDEFARAALLY------ 558
Query: 590 KEGSISTEQLLGSSGAGRMLFTSGGLE------QVKDTQAEDLTNK------KVYPR--R 635
S+ L S FT E +V Q D+ +K K++ + R
Sbjct: 559 ----ASSHSTLSSR------FTHAKEEDDSDQVEVPRDQENDVGDKQSAVKMKMFGKLTR 608
Query: 636 EEFQWRPSPILCKRFDLIDPY 656
+ F+W P +LCKRF++ DPY
Sbjct: 609 DTFEWHPDKLLCKRFNVPDPY 629
>sp|Q9DBM1|GPTC1_MOUSE G patch domain-containing protein 1 OS=Mus musculus GN=Gpatch1 PE=2
SV=1
Length = 930
Score = 149 bits (377), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 137/417 (32%), Positives = 195/417 (46%), Gaps = 85/417 (20%)
Query: 1 MDSD-EEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGR-RRFHGA 58
+DSD +ED + +GT +E +E R KK I Q V DE+GR +RFHGA
Sbjct: 4 LDSDSDEDLISYGTGLEPLDE-GERPKKPIPLQD----------QTVRDEKGRYKRFHGA 52
Query: 59 FTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSL 118
F+GGFSAGY+NTVGSKEGWTP TF SSR+NRA+ +F+DE++ +EF G + +
Sbjct: 53 FSGGFSAGYFNTVGSKEGWTPSTFVSSRQNRADKSALGPEDFMDEEDLSEF-GIAPKAIV 111
Query: 119 QFDTFGSTAAEFARKQAEKEQQQRPSAIPGPA-PDELVVPATESIGVKLLLKMGWRRGRS 177
D F S + R++A ++ + IPG D+L+ PA S+G +LL KMGW+ G+
Sbjct: 112 TTDDFASKTKDRIREKA-RQLAAAAAPIPGATLLDDLITPAKLSVGFELLRKMGWKEGQG 170
Query: 178 IKDSL-YDARRE----GRKAL----------------LAFSSDDAKTAFNDAEPVDLEQS 216
+ + ARR+ G K + D+ A D PVD
Sbjct: 171 VGPRVKRKARRQKPDPGVKIYGCALPPGGSEESEDEDDDYLPDNVTFAPKDVMPVD---- 226
Query: 217 VNDDGQLSRCTPVYVLNPKQDLHGLGY---DPYKNAPEFREKKRSRTSGHSKNGRTKALS 273
PK ++HGL Y DP++ + + G S+ G + L
Sbjct: 227 ---------------FTPKDNVHGLAYKGLDPHQALFGMPGEHLNLFGGASE-GTSHLLG 270
Query: 274 IKDSLFGLKSGKVAPGFGIGALEEYDAEDEDLYGADYEFVDTYAEEDEEPS--------- 324
G K G FG+GALEE ED+D+Y + +DEEP
Sbjct: 271 DVGLSKGRKLGISGQAFGVGALEE---EDDDIYATETLSKYDTVLKDEEPGDGLYGWTAP 327
Query: 325 -------RLSKDVRKKLVGREQQDVLPGFILASKSDYQLERFDPPVVPKDFVPHHKF 374
+D+R VG+ +L GF LASK + + PP +P+D+ P H F
Sbjct: 328 KQYKNQKEPERDLR--YVGK----ILEGFSLASKPLSSKKIYPPPQLPRDYRPVHYF 378
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 30/143 (20%)
Query: 530 PFQDDPAKQERFERFLKEKYQGGLRSTDSGGASAMSEAARARERLDFEAAAEAIEKAKQR 589
PF DP KQ R+E FL +G + + +M+E R+RER +F AA+
Sbjct: 505 PFAKDPEKQRRYEEFLVHMKKGQKDALERCLDPSMTEWERSREREEFARAAQLY------ 558
Query: 590 KEGSISTEQLLGSSGAGRMLFTSGGLEQVKDT------QAEDLTNK------KVYPR--R 635
+S+ L S FT E+ D Q D+++K K++ + R
Sbjct: 559 ----VSSNSTLSSR------FTHAKEEEDSDQVEVPRDQENDVSDKQSAVKMKMFGKLTR 608
Query: 636 EEFQWRPSPILCKRFDLIDPYIG 658
+ F+W P +LCKRF++ DPY G
Sbjct: 609 DTFEWHPDKLLCKRFNVPDPYPG 631
>sp|Q21827|GPTC1_CAEEL G patch domain-containing protein 1 homolog OS=Caenorhabditis
elegans GN=R07E5.1 PE=1 SV=1
Length = 812
Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 162/345 (46%), Gaps = 50/345 (14%)
Query: 46 VTDEEGRRRFHGAFTGGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDE 105
TDE+G+RRFHGAFTGGFSAGY+NTVGSK+GW PQ F+SSR R E +Q +F+D ++
Sbjct: 35 ATDEKGKRRFHGAFTGGFSAGYWNTVGSKQGWVPQVFSSSRNERGEQIKQRAEDFMDAED 94
Query: 106 KAEFEGKSFGTSLQFDTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVVPATESIGVK 165
E+ G + Q FG A + RK A + S I D +V P + SIGV+
Sbjct: 95 LGEY-GIGNRSIKQTAAFGEGAGQ-KRKMAWERDTTSISTITQMFED-VVKPVSNSIGVR 151
Query: 166 LLLKMGWRRGRSI--KDSLYDARREGRKALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQL 223
+L MGWR GR I + +R G + F + A ++ + N+D +
Sbjct: 152 MLRSMGWREGRGIGLANVKQKQKRGGESSEAQFDREQA------SKVAPAYEFSNEDALV 205
Query: 224 SRCTPVYVLNPKQDLHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGLKS 283
+ TP+ HG+GY + E RT+ K+G+ + IK
Sbjct: 206 KQLTPL------TGTHGIGYQGLRKTTVLNE-SYGRTTLALKSGKKNSKGIK-------- 250
Query: 284 GKVAPGFGIGALEEYDAEDEDLYG----ADYEFVDTYAEEDEEPSRLSKDVRKKLVGREQ 339
FG+GA EE EDE +Y + ++F A EE + +
Sbjct: 251 ---GQAFGVGAFEE---EDESVYSNYDLSQFDFSLDVAGASEESN------------LKT 292
Query: 340 QDVLPGFILASKSDYQLERFDPPVVPKDFVPHHKFPGPLETDSKL 384
Q ++ F L K + + PP VP +F H+ P P++ SKL
Sbjct: 293 QKLVTAFELQPKRLNPRKFYAPPRVPPNFRGDHR-PIPMDI-SKL 335
>sp|Q9VUA0|GPTC1_DROME G patch domain-containing protein 1 homolog OS=Drosophila
melanogaster GN=CG8833 PE=2 SV=1
Length = 952
Score = 117 bits (294), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 155/343 (45%), Gaps = 62/343 (18%)
Query: 4 DEEDYVF-FGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGRRRFHGAFTGG 62
DEE+++ FGTP+ ++ KK +A Q V DE G+RRFHGAFTGG
Sbjct: 2 DEEEHLHRFGTPLPALQKDVVPAKKPVAIED----------QIVKDENGKRRFHGAFTGG 51
Query: 63 FSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQ-SILNFLDEDEKAEFEGKSFGTSLQFD 121
FSAG++NTVGS EGWTPQTF SSR RA K Q +F+D+++ EF G + D
Sbjct: 52 FSAGFWNTVGSLEGWTPQTFKSSRGERASSKAQLKPEDFMDQEDLGEFGIAPQGIRTR-D 110
Query: 122 TFGSTAAEFARKQAEKEQQQRP----SAIPG-PAPDELVVPATESIGVKLLLKMGWRRGR 176
F + + R + + +P AIPG P ++L+ P + + V++L MGW+ G+
Sbjct: 111 EFANEDEQKQRSDQRRRKLMQPELGVGAIPGLPVLEQLLRPVRDKVAVRILKSMGWKPGQ 170
Query: 177 SIKDSLYDARREGRKALLAFSSDDAKTAFNDAEPVDL-------EQSVNDDGQLSRCT-- 227
+ R+E R+A S + AE + E S N+D T
Sbjct: 171 GV--GPRQTRKEKRQATARNSKEQYLMEHYGAEGLPSNKENKGEEDSNNEDEDDEDITFA 228
Query: 228 -----PVYVLNPKQDLHGLGYDPYKNAPEF--REKKRSRTSGH-------SKNGRTKALS 273
P++ PK++ G+ Y P ++ H K LS
Sbjct: 229 PDDYEPIF-YTPKENRFGMSYSGLNRDPILSKSSSSSAKPMQHINLFGEMEAQANKKQLS 287
Query: 274 IKDSLFGLKSGKVAPGFGIGALEEYDAEDEDLYGAD----YEF 312
I+ FG+GA EE EDED+Y D Y+F
Sbjct: 288 IRGQ-----------AFGVGAFEE---EDEDIYARDDMTRYDF 316
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 33/148 (22%)
Query: 629 KKVYPRREEFQWRPSPILCKRFDLIDPYIG---KPPPAPRIKSKMDSLIFISDSV--KAP 683
+K+ R + W+P+ +LCKR+++ +P+ G +P + K+K+ ++ SV KA
Sbjct: 585 RKIVMERTKTMWKPTALLCKRYNIAEPFGGAMLEPEKELKAKAKISVFDYLETSVNTKAN 644
Query: 684 RLEESVAANNDRYSAPQSDAPEISRDVTKEIEADIQ------------------------ 719
S+ + S P+ S + EA+IQ
Sbjct: 645 FETPSIFPKHIEKSIPEKVETPPSPPPAPQPEAEIQDKPNTKEEPSKHTFVPKTPLEQAV 704
Query: 720 VENVERP----VDLYKAIFSDDSDDEVE 743
E+ +P VDL+K+IF D ++E E
Sbjct: 705 DESRNKPISEKVDLFKSIFEDSDEEETE 732
>sp|Q9HE07|YK96_SCHPO Uncharacterized protein C20H4.06c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC20H4.06c PE=4 SV=1
Length = 534
Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 160/393 (40%), Gaps = 124/393 (31%)
Query: 1 MDSDEEDYVFFGTPIEREEEITSRRKKSIAEASGHLRTLAPWKQEVTDEEGRRRFHGAFT 60
+D YV +G+P + E SR + + WKQE DE R+RFHGAFT
Sbjct: 11 VDVHRHPYVVYGSPFDLE---PSRINQGVPV----------WKQEARDERNRKRFHGAFT 57
Query: 61 GGFSAGYYNTVGSKEGWTPQTFTSSRKNRAEVKQQSILNFLDEDEKAEFEGKSFGTSLQF 120
GGFSAGY+NTVGSKEGW P+++ SSR V +I + +DE+++A+ E TS +
Sbjct: 58 GGFSAGYFNTVGSKEGWQPKSWKSSRNENKSVHGMTIDDIMDEEDRADQELSKVYTS-KI 116
Query: 121 DTFGSTAAEFARKQAEKEQQQRPSAIPGPAPDELVVPAT---ESIGVKLLLKMGWRRGRS 177
+T ++ P D L+ + +SIG K+L +GW
Sbjct: 117 NTIDTSI---------------------PIDDPLLREFSNRDDSIGEKMLKNLGWN---- 151
Query: 178 IKDSLYDARREGRKALLAFSSDDAKTAFNDAEPVDLEQSVNDDGQLSRCTPVYVLNPKQD 237
D + F Q DD +L+ Q
Sbjct: 152 -------------------GHDFVISPF---------QGYYDDTKLT----------NQA 173
Query: 238 LHGLGYDPYKNAPEFREKKRSRTSGHSKNGRTKALSIKDSLFGLKSGKVAPGFGIGALEE 297
HG+GY A + + +R + G +KN R GFG G L +
Sbjct: 174 YHGIGY----QADDVFQLER-KPVGMAKNLRG-------------------GFGSGVLND 209
Query: 298 YDAEDEDLY--GAD---YEFVDTYAEEDEEP------SRLSKDVRKK----LVGREQQD- 341
ED+D+Y GA Y+ ++ P + LSK R K + + D
Sbjct: 210 DGIEDQDIYDLGAPKMRYDKSINITKKVASPFTPVKHTFLSKKDRSKGKSIIKSQNCSDG 269
Query: 342 --VLPGFILA--SKSDYQLERFDPPVVPKDFVP 370
LPGF++ +S +Q F PP +P+ + P
Sbjct: 270 LPPLPGFVVVFNLQSPFQNNWFPPPTIPEGWEP 302
>sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus
GN=Cherp PE=1 SV=1
Length = 936
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 391 EIP-PPEDNNLKLLIEGVATLVARCGKLFEDISREKNQSNPLFSFLTGGNGHDYYARKL 448
E+P PP+D L+ +I+ +A VAR G FE ++ EK + NP FSFL GG + YY KL
Sbjct: 2 EMPMPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKL 60
>sp|Q8IWX8|CHERP_HUMAN Calcium homeostasis endoplasmic reticulum protein OS=Homo sapiens
GN=CHERP PE=1 SV=3
Length = 916
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 391 EIP-PPEDNNLKLLIEGVATLVARCGKLFEDISREKNQSNPLFSFLTGGNGHDYYARKL 448
E+P PP+D L+ +I+ +A VAR G FE ++ EK + NP FSFL GG + YY KL
Sbjct: 2 EMPLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEFYSYYKCKL 60
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.128 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 385,667,635
Number of Sequences: 539616
Number of extensions: 17700274
Number of successful extensions: 84964
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 1144
Number of HSP's that attempted gapping in prelim test: 57108
Number of HSP's gapped (non-prelim): 13640
length of query: 988
length of database: 191,569,459
effective HSP length: 127
effective length of query: 861
effective length of database: 123,038,227
effective search space: 105935913447
effective search space used: 105935913447
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)