Your job contains 1 sequence.
>001971
METRFRGEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQFF
PLAVGNSSNSSSSCSDEVNLGIENGKREVEKKRRAVVVEDHNSYEVAAGGLSLKLGGNGH
PLSEREMGNWAGSSGKKTKFGGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASR
ALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPDAVANGSSPNNDQT
SGYLLISLLRILSNMHSSRSDQRTDQDLLSHLLRGLASPAGENGGRGISGLLQEHQDMLN
ERTSAGNSEVVQAFLANGQGCPTPFRQQLNATVSEMPQQVSLPHDARGAEDQDGNVAQIK
MNNFDLNDVYIDSDDGTEDVERSPVPANLGTSSIDCPSWVRQDSQQSSPPQTSGNSDSAS
AQSPSSSSDAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILT
IYLRQAEAAWEELCCDLTFSLSRLLDLSNDSFWTSGWVYARVQHQIAFIYNGQVVLDTSL
PPRSNNYSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDD
VDGFKELDELQCVNFSCSIPAVTGRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESAL
EFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLI
EFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF
VPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPG
MVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVPDSNI
YQKQNNESTASFEIGQTPVRPTQHNCKLCHQKLGYATASRSLVYKPAMLSMVAIAAVCVC
VALLFKSCPEVLYVFRPFRWEMLDYGTS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001971
(988 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2101402 - symbol:SPL12 "squamosa promoter-bind... 1496 3.8e-255 3
TAIR|locus:2041329 - symbol:SPL1 "squamosa promoter bindi... 1276 2.0e-211 3
TAIR|locus:2037355 - symbol:SPL14 "squamosa promoter bind... 680 1.9e-106 3
TAIR|locus:2011706 - symbol:AT1G76580 species:3702 "Arabi... 475 4.1e-78 3
TAIR|locus:504956101 - symbol:SPL8 "squamosa promoter bin... 313 7.1e-27 1
TAIR|locus:2057656 - symbol:SPL3 "squamosa promoter bindi... 312 9.1e-27 1
TAIR|locus:2087105 - symbol:SPL5 "squamosa promoter bindi... 311 1.2e-26 1
TAIR|locus:2009675 - symbol:SPL4 "squamosa promoter bindi... 307 3.1e-26 1
TAIR|locus:2059974 - symbol:SPL9 "squamosa promoter bindi... 292 4.2e-26 2
TAIR|locus:2026428 - symbol:AT1G69170 species:3702 "Arabi... 305 5.1e-26 1
TAIR|locus:2169248 - symbol:SPL2 "squamosa promoter bindi... 307 6.2e-26 1
TAIR|locus:2159717 - symbol:SPL13A "SQUAMOSA PROMOTER-BIN... 297 3.7e-25 1
TAIR|locus:2832472 - symbol:SPL13B "SQUAMOSA PROMOTER-BIN... 297 3.7e-25 1
TAIR|locus:2095793 - symbol:SPL15 "squamosa promoter bind... 282 1.5e-23 1
TAIR|locus:2016014 - symbol:SPL10 "squamosa promoter bind... 277 7.8e-22 2
TAIR|locus:2015999 - symbol:SPL11 "squamosa promoter-like... 273 3.0e-21 1
>TAIR|locus:2101402 [details] [associations]
symbol:SPL12 "squamosa promoter-binding protein-like 12"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR002110 InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 SMART:SM00248 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403 GO:GO:0003700
GO:GO:0006351 EMBL:AL138658 Gene3D:4.10.1100.10 SUPFAM:SSF103612
EMBL:AJ132096 EMBL:AJ132097 EMBL:BT003817 IPI:IPI00548047
PIR:T47827 RefSeq:NP_191562.1 UniGene:At.502 PDB:1WJ0 PDBsum:1WJ0
ProteinModelPortal:Q9S7P5 SMR:Q9S7P5 PRIDE:Q9S7P5
EnsemblPlants:AT3G60030.1 GeneID:825173 KEGG:ath:AT3G60030
GeneFarm:4773 TAIR:At3g60030 eggNOG:NOG266915 HOGENOM:HOG000082688
InParanoid:Q9S7P5 OMA:RWELLEY PhylomeDB:Q9S7P5
ProtClustDB:CLSN2685028 EvolutionaryTrace:Q9S7P5
Genevestigator:Q9S7P5 GermOnline:AT3G60030 Uniprot:Q9S7P5
Length = 927
Score = 1496 (531.7 bits), Expect = 3.8e-255, Sum P(3) = 3.8e-255
Identities = 303/528 (57%), Positives = 377/528 (71%)
Query: 147 RAVC-QVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDE 205
RA+C QV++CGADLS KDYHRRHKVCE+HSKA+ ALVG +MQRFCQQCSRFHVL+EFDE
Sbjct: 123 RAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFDE 182
Query: 206 GKRSCRRRLAGHNKRRRKTNPDAVANGSSPNNDQTSGYLLISLLRILSNMHSSRSDQRTD 265
GKRSCRRRLAGHNKRRRK NPD + NG+S ++DQTS Y+LI+LL+ILSN+HS++SDQ D
Sbjct: 183 GKRSCRRRLAGHNKRRRKANPDTIGNGTSMSDDQTSNYMLITLLKILSNIHSNQSDQTGD 242
Query: 266 QDLLSHLLRGLASPAGENGGRGISGLLQEHQDMLNERTSAGNSEVVQAFLANGQGCPTPF 325
QDLLSHLL+ L S AGE+ GR + GLLQ L + GN + A L+ Q P
Sbjct: 243 QDLLSHLLKSLVSQAGEHIGRNLVGLLQGGGG-LQASQNIGN---LSALLSLEQA---PR 295
Query: 326 RQQLNATVSEMPQQVSLPHDARGAEDQDGNVAQIKMNNFDLNDVYIDSDDGTEDVERS-P 384
+ +VSE P Q + A+ D + Q+K+N+FDLND+YIDSDD T D+ERS P
Sbjct: 296 EDIKHHSVSETPWQEVYANSAQERVAPDRSEKQVKVNDFDLNDIYIDSDD-TTDIERSSP 354
Query: 385 VPANLGTSSIDCPSWVRXXXXXXXXXXXXGNXXXXXXXXXXXXXXXXXRTDRIVFKLFGK 444
P N TSS+D R + RTDRIVFKLFGK
Sbjct: 355 PPTNPATSSLDYHQDSRQSSPPQTSRR--NSDSASDQSPSSSSGDAQSRTDRIVFKLFGK 412
Query: 445 EPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELCCDLTFXXXXX 504
EPNDFP+ LR QIL+WL+H+P+DMESYIRPGC++LTIYLRQ EA+WEELCCDL+F
Sbjct: 413 EPNDFPVALRGQILNWLAHTPTDMESYIRPGCIVLTIYLRQDEASWEELCCDLSFSLRRL 472
Query: 505 XXXXXXXFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVKPIAVPASERA 564
WT GW+Y RVQ+Q+AF +NGQVVLDTSLP RS++YS+I++V+P+AV +++A
Sbjct: 473 LDLSDDPLWTDGWLYLRVQNQLAFAFNGQVVLDTSLPLRSHDYSQIITVRPLAV--TKKA 530
Query: 565 QFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAVTG 624
QF VKGINL R TRLLC VEG ++VQEAT +++ D KE +E+ VNFSC +P +G
Sbjct: 531 QFTVKGINLRRPGTRLLCTVEGTHLVQEATQGGMEERDDLKENNEIDFVNFSCEMPIASG 590
Query: 625 RGFIEIEDHG-FSSTFFPFIVAE-EDVCSEIRMLESALEFNRTDADVE 670
RGF+EIED G SS+FFPFIV+E ED+CSEIR LES LEF TD+ ++
Sbjct: 591 RGFMEIEDQGGLSSSFFPFIVSEDEDICSEIRRLESTLEFTGTDSAMQ 638
Score = 867 (310.3 bits), Expect = 3.8e-255, Sum P(3) = 3.8e-255
Identities = 189/333 (56%), Positives = 232/333 (69%)
Query: 661 EFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNT-DLFPLRRFKWL 719
E R ++ +E F D+ QAMDFIHEIGWL HRS+ KSRL D N DLF L RFK+L
Sbjct: 620 EIRRLESTLE-FTGTDSAMQAMDFIHEIGWLLHRSELKSRLAASDHNPEDLFSLIRFKFL 678
Query: 720 IEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLR 779
IEFSMD EWC V+KKLL+IL + PS D AL+EL LLHRAVRKNS+P+V++LLR
Sbjct: 679 IEFSMDREWCCVMKKLLNILFEEGTV---DPSPDAALSELCLLHRAVRKNSKPMVEMLLR 735
Query: 780 FVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDP 839
F P + +N+ L LFRPD GP GLTP+HIAAGKDGSEDVLDALT+DP
Sbjct: 736 FSPKK-------KNQTLAG------LFRPDAAGPGGLTPLHIAAGKDGSEDVLDALTEDP 782
Query: 840 GMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGG-HVVVDICGVVPDS 898
GM GI+AWKN+RD++G TPEDYARLRGH+SYIHLVQ+K++++P HVVV+I P+S
Sbjct: 783 GMTGIQAWKNSRDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNI----PES 838
Query: 899 -NIYQKQNNESTASFEIGQTPVRPTQHN-CKLC-HQKLGYATASRSLVYKPAMLSMXXXX 955
NI KQ S + + + TQ N CKLC H+++ T +S+ Y+PAMLSM
Sbjct: 839 FNIEHKQEKRSP----MDSSSLEITQINQCKLCDHKRVFVTTHHKSVAYRPAMLSMVAIA 894
Query: 956 XXXXXXXLLFKSCPEVLYVFRPFRWEMLDYGTS 988
LLFKSCPEVLYVF+PFRWE+L+YGTS
Sbjct: 895 AVCVCVALLFKSCPEVLYVFQPFRWELLEYGTS 927
Score = 134 (52.2 bits), Expect = 3.8e-255, Sum P(3) = 3.8e-255
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 1 METRFRGEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLN 48
ME R GE G +S++ GK+++EWDLNDWKW+GDLF+A++LN
Sbjct: 1 MEARIEGEVE---G-HSLEYGFSGKRSVEWDLNDWKWNGDLFVATQLN 44
>TAIR|locus:2041329 [details] [associations]
symbol:SPL1 "squamosa promoter binding protein-like 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0032880 "regulation of protein
localization" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] InterPro:IPR002110
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 SMART:SM00248
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
GO:GO:0003700 GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.1100.10
SUPFAM:SSF103612 eggNOG:NOG266915 HOGENOM:HOG000082688
ProtClustDB:CLSN2685028 EMBL:AJ011577 EMBL:AJ011628 EMBL:AJ011629
EMBL:AK230269 IPI:IPI00519879 PIR:T02179 PIR:T02180 PIR:T52601
PIR:T52602 RefSeq:NP_850468.1 UniGene:At.12581
ProteinModelPortal:Q9SMX9 SMR:Q9SMX9 STRING:Q9SMX9 PaxDb:Q9SMX9
PRIDE:Q9SMX9 EnsemblPlants:AT2G47070.1 GeneID:819321
KEGG:ath:AT2G47070 GeneFarm:4762 TAIR:At2g47070 InParanoid:Q9SMX9
OMA:RGNDAYL PhylomeDB:Q9SMX9 Genevestigator:Q9SMX9
GermOnline:AT2G47070 Uniprot:Q9SMX9
Length = 881
Score = 1276 (454.2 bits), Expect = 2.0e-211, Sum P(3) = 2.0e-211
Identities = 273/539 (50%), Positives = 349/539 (64%)
Query: 260 SDQRTDQDLLSHLLRGLASPAGENGGRGI-SGLLQEHQDMLNERTSAGNSEVVQAFLANG 318
SD + LL LL+ L++ G + + S LL+ E+ +V+ L G
Sbjct: 191 SDDHSSNYLLITLLKILSNMHNHTGDQDLMSHLLKSLVSHAGEQLG---KNLVELLLQGG 247
Query: 319 --QGCPTPFRQQLNATVSEMPQQVSLPHDAR--GAEDQDGNVAQIKMNNFDLNDVYIDSD 374
QG L + + PQ+ AR G ++ + Q+KMN+FDLND+YIDSD
Sbjct: 248 GSQGSLNIGNSALLG-IEQAPQEELKQFSARQDGTATENRSEKQVKMNDFDLNDIYIDSD 306
Query: 375 DGTEDVERSPVPANLGTSSIDCPSWVRXXXXXXXXXXXXGNXXXXXXXXXXXXXXXXXRT 434
D DVERSP P N TSS+D PSW+ + RT
Sbjct: 307 D--TDVERSPPPTNPATSSLDYPSWIHQSSPPQTSR---NSDSASDQSPSSSSEDAQMRT 361
Query: 435 DRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEELC 494
RIVFKLFGKEPN+FP+VLR QILDWLSHSP+DMESYIRPGC++LTIYLRQAE AWEEL
Sbjct: 362 GRIVFKLFGKEPNEFPIVLRGQILDWLSHSPTDMESYIRPGCIVLTIYLRQAETAWEELS 421
Query: 495 CDLTFXXXXXXXXXXXXFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILSVK 554
DL F WT+GW+Y RVQ+Q+AF+YNGQVV+DTSL +S +YS I+SVK
Sbjct: 422 DDLGFSLGKLLDLSDDPLWTTGWIYVRVQNQLAFVYNGQVVVDTSLSLKSRDYSHIISVK 481
Query: 555 PIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLD-DVDGFKELDEL-QC 612
P+A+ A+E+AQF VKG+NL + TRLLC+VEGKY++QE TH+ + D FK+ E+ +C
Sbjct: 482 PLAIAATEKAQFTVKGMNLRQRGTRLLCSVEGKYLIQETTHDSTTREDDDFKDNSEIVEC 541
Query: 613 VNFSCSIPAVTGRGFIEIEDHGFSSTFFPFIVAEED-VCSEIRMLESALEFNRTDADVER 671
VNFSC +P ++GRGF+EIED G SS+FFPF+V E+D VCSEIR+LE+ LEF TD+
Sbjct: 542 VNFSCDMPILSGRGFMEIEDQGLSSSFFPFLVVEDDDVCSEIRILETTLEFTGTDS---- 597
Query: 672 FGKIDTKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAV 731
QAMDFIHEIGWL HRS +LG DPN +FPL RF+WLIEFSMD EWCAV
Sbjct: 598 ------AKQAMDFIHEIGWLLHRS----KLGESDPNPGVFPLIRFQWLIEFSMDREWCAV 647
Query: 732 VKKLLHILLDGTVSLGEHPSLDLA-LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRL 789
++KLL++ DG V GE S A L+EL LLHRAVRKNS+P+V++LLR++P + + L
Sbjct: 648 IRKLLNMFFDGAV--GEFSSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIPKQQRNSL 704
Score = 649 (233.5 bits), Expect = 2.0e-211, Sum P(3) = 2.0e-211
Identities = 138/246 (56%), Positives = 166/246 (67%)
Query: 745 SLGEHPSLDLA-LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG 803
++GE S A L+EL LLHRAVRKNS+P+V++LLR++P + +
Sbjct: 659 AVGEFSSSSNATLSELCLLHRAVRKNSKPMVEMLLRYIPKQ----------------QRN 702
Query: 804 FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR 863
LFRPD GPAGLTP+HIAAGKDGSEDVLDALT+DP MVGIEAWK RDS+G TPEDYAR
Sbjct: 703 SLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGIEAWKTCRDSTGFTPEDYAR 762
Query: 864 LRGHYSYIHLVQKKINKRPNG-GHVVVDICGVVPDSNIYQKQNNESTASFEIGQTPVRPT 922
LRGH+SYIHL+Q+KINK+ HVVV+I D + ++ ++ EI Q P
Sbjct: 763 LRGHFSYIHLIQRKINKKSTTEDHVVVNIPVSFSDREQKEPKSGPMASALEITQIP---- 818
Query: 923 QHNCKLCHQKLGYATASRSLVYKPAMLSMXXXXXXXXXXXLLFKSCPEVLYVFRPFRWEM 982
CKLC KL Y T RS+ Y+PAMLSM LLFKSCPEVLYVF+PFRWE+
Sbjct: 819 ---CKLCDHKLVYGTTRRSVAYRPAMLSMVAIAAVCVCVALLFKSCPEVLYVFQPFRWEL 875
Query: 983 LDYGTS 988
LDYGTS
Sbjct: 876 LDYGTS 881
Score = 533 (192.7 bits), Expect = 4.5e-133, Sum P(3) = 4.5e-133
Identities = 113/197 (57%), Positives = 137/197 (69%)
Query: 148 AVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGK 207
AVCQVE+C ADLS KDYHRRHKVCEMHSKA+ A VG ++QRFCQQCSRFH+LQEFDEGK
Sbjct: 104 AVCQVENCEADLSKVKDYHRRHKVCEMHSKATSATVGGILQRFCQQCSRFHLLQEFDEGK 163
Query: 208 RSCRRRLAGHNKRRRKTNPDAVANGSSPNNDQTSGYLLISLLRILSNMHSSRSDQRTDQD 267
RSCRRRLAGHNKRRRKTNP+ ANG+ P++D +S YLLI+LL+ILSNMH+ DQ D
Sbjct: 164 RSCRRRLAGHNKRRRKTNPEPGANGN-PSDDHSSNYLLITLLKILSNMHNHTGDQ----D 218
Query: 268 LLSHLLRGLASPAGENGGRGISGLLQE---HQDMLNERTSA------GNSEVVQAFLANG 318
L+SHLL+ L S AGE G+ + LL + Q LN SA E ++ F A
Sbjct: 219 LMSHLLKSLVSHAGEQLGKNLVELLLQGGGSQGSLNIGNSALLGIEQAPQEELKQFSARQ 278
Query: 319 QGCPTPFRQQLNATVSE 335
G T R + +++
Sbjct: 279 DGTATENRSEKQVKMND 295
Score = 158 (60.7 bits), Expect = 2.0e-211, Sum P(3) = 2.0e-211
Identities = 38/81 (46%), Positives = 45/81 (55%)
Query: 1 METRFR--GEAHHFYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLNPAPNENIGRQ 58
ME R GEA FYG +VGK+++EWDLNDWKWDGDLF+A++ GRQ
Sbjct: 1 MEARIDEGGEAQQFYG-------SVGKRSVEWDLNDWKWDGDLFLATQTTR------GRQ 47
Query: 59 FFPLAVGXXXXXXXXXXDEVN 79
FFPL G DE N
Sbjct: 48 FFPL--GNSSNSSSSCSDEGN 66
>TAIR|locus:2037355 [details] [associations]
symbol:SPL14 "squamosa promoter binding protein-like 14"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA;TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042742 "defense response to bacterium"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR002110 InterPro:IPR004333 Pfam:PF03110 PROSITE:PS50088
PROSITE:PS51141 SMART:SM00248 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0042742
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003700 GO:GO:0006351 EMBL:AC007369
Gene3D:4.10.1100.10 SUPFAM:SSF103612 eggNOG:NOG266915
HOGENOM:HOG000082688 EMBL:AJ242957 EMBL:AJ243094 EMBL:AY074499
IPI:IPI00520597 PIR:G86342 PIR:T52569 RefSeq:NP_173522.1
UniGene:At.21192 ProteinModelPortal:Q8RY95 SMR:Q8RY95
EnsemblPlants:AT1G20980.1 GeneID:838692 KEGG:ath:AT1G20980
GeneFarm:4776 TAIR:At1g20980 InParanoid:Q8RY95 OMA:VERDYCA
PhylomeDB:Q8RY95 ProtClustDB:CLSN2679456 Genevestigator:Q8RY95
GermOnline:AT1G20980 Uniprot:Q8RY95
Length = 1035
Score = 680 (244.4 bits), Expect = 1.9e-106, Sum P(3) = 1.9e-106
Identities = 166/493 (33%), Positives = 265/493 (53%)
Query: 433 RTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEE 492
RT +IVFKL K+P+ P LR++I +WLS+ PS+MESYIRPGCV+L++Y+ + AAWE+
Sbjct: 504 RTGKIVFKLLDKDPSQLPGTLRSEIYNWLSNIPSEMESYIRPGCVVLSVYVAMSPAAWEQ 563
Query: 493 LCCDLTFXXXXXXXXXXXXFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILS 552
L L FW + Q+A NG+V S R+ N +++S
Sbjct: 564 LEQKLLQRLGVLLQNSPSDFWRNARFIVNTGRQLASHKNGKVRCSKSW--RTWNSPELIS 621
Query: 553 VKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQC 612
V P+AV A E V+G +L + C G YM E T + DEL
Sbjct: 622 VSPVAVVAGEETSLVVRGRSLTNDGISIRCTHMGSYMAMEVTRAVCRQTI----FDELNV 677
Query: 613 VNFSCSI--PAVTGRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVE 670
+F P GR FIE+E+ GF FP I+A +C E+ L D E
Sbjct: 678 NSFKVQNVHPGFLGRCFIEVEN-GFRGDSFPLIIANASICKELNRLGEEFHPKSQDMTEE 736
Query: 671 RFGKID----TKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDH 726
+ + ++ + + F++E+GWLF ++Q+ L +D F L RFK+L+ S++
Sbjct: 737 QAQSSNRGPTSREEVLCFLNELGWLFQKNQTSE----LREQSD-FSLARFKFLLVCSVER 791
Query: 727 EWCAVVKKLLHILLDGTVSLGE--HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLE 784
++CA+++ LL +L++ + E +LD+ L E+ LL+RAV++ S +V+LL+ ++
Sbjct: 792 DYCALIRTLLDMLVERNLVNDELNREALDM-LAEIQLLNRAVKRKSTKMVELLIHYLVNP 850
Query: 785 VSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGI 844
++ L S K F+F P++ GP G+TP+H+AA GS+D++D LT+DP +G+
Sbjct: 851 LT--LSSSRK---------FVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGL 899
Query: 845 EAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI----NKRP--NGGHVVVDICGVVPDS 898
+W RD++G TP YA +R +++Y LV +K+ NK+ N H VVD G+
Sbjct: 900 SSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSKRL 959
Query: 899 NIYQKQNNESTAS 911
++ +++ S AS
Sbjct: 960 SLEMNKSSSSCAS 972
Score = 372 (136.0 bits), Expect = 1.9e-106, Sum P(3) = 1.9e-106
Identities = 69/95 (72%), Positives = 81/95 (85%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+CQV++C DLS+AKDYHRRHKVCE+HSKA++ALVG MQRFCQQCSRFH+L EFDEGKR
Sbjct: 119 MCQVDNCTEDLSHAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKR 178
Query: 209 SCRRRLAGHNKRRRKTN-PDAVANGSS-PNNDQTS 241
SCRRRLAGHN+RRRKT P+ VA+G P N T+
Sbjct: 179 SCRRRLAGHNRRRRKTTQPEEVASGVVVPGNHDTT 213
Score = 216 (81.1 bits), Expect = 4.2e-48, Sum P(3) = 4.2e-48
Identities = 58/190 (30%), Positives = 96/190 (50%)
Query: 804 FLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR 863
F+F P++ GP G+TP+H+AA GS+D++D LT+DP +G+ +W RD++G TP YA
Sbjct: 859 FVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTPYSYAA 918
Query: 864 LRGHYSYIHLVQKKI----NKRP--NGGHVVVDICGVVPDSNIYQKQNNESTASFEIGQT 917
+R +++Y LV +K+ NK+ N H VVD G+ ++ +++ S AS
Sbjct: 919 IRNNHNYNSLVARKLADKRNKQVSLNIEHEVVDQTGLSKRLSLEMNKSSSSCASCA---- 974
Query: 918 PVRPTQHNCKLCHQKLGYATASRSLVYKPAMLSMXXXXXXXXXXXLLFKSCPEVLYVFRP 977
L +Q+ + S+ L P + SM + + P ++
Sbjct: 975 -------TVALKYQRR--VSGSQRLFPTPIIHSMLAVATVCVCVCVFMHAFP-IVRQGSH 1024
Query: 978 FRWEMLDYGT 987
F W LDYG+
Sbjct: 1025 FSWGGLDYGS 1034
Score = 50 (22.7 bits), Expect = 1.9e-106, Sum P(3) = 1.9e-106
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 12 FYGMNSMDLRAVGKKTLEWDLNDWKWDGDLFIASKLN 48
+Y M++ +++ ++ EW+ W WD F A ++
Sbjct: 25 YYPMSNRLVQSQPQRRDEWNSKMWDWDSRRFEAKPVD 61
Score = 37 (18.1 bits), Expect = 2.9e-71, Sum P(3) = 2.9e-71
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 214 LAGHNKRRRKTNPDAVANGSSPN 236
LA N NP NG+SP+
Sbjct: 280 LARKNMDHPTVNPQNDMNGASPS 302
>TAIR|locus:2011706 [details] [associations]
symbol:AT1G76580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002110
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 SMART:SM00248
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 Gene3D:1.25.40.20 InterPro:IPR020683
GO:GO:0003700 GO:GO:0006351 EMBL:AC015450 Gene3D:4.10.1100.10
SUPFAM:SSF103612 HOGENOM:HOG000082688 UniGene:At.21192
ProtClustDB:CLSN2679456 EMBL:AY062670 EMBL:BT006626 EMBL:AJ630503
EMBL:AY568676 EMBL:AJ242958 IPI:IPI00531289 IPI:IPI00607526
PIR:H96793 PIR:T52568 RefSeq:NP_177784.6 UniGene:At.504
ProteinModelPortal:Q700C2 SMR:Q700C2 PaxDb:Q700C2 PRIDE:Q700C2
EnsemblPlants:AT1G76580.1 GeneID:843991 KEGG:ath:AT1G76580
GeneFarm:4778 TAIR:At1g76580 eggNOG:NOG128281 OMA:IANATIC
PhylomeDB:Q700C2 Genevestigator:Q700C2 GermOnline:AT1G76580
Uniprot:Q700C2
Length = 988
Score = 475 (172.3 bits), Expect = 4.1e-78, Sum P(3) = 4.1e-78
Identities = 117/356 (32%), Positives = 192/356 (53%)
Query: 433 RTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPSDMESYIRPGCVILTIYLRQAEAAWEE 492
RT +I FKLF K+P+ P LR +I WLS PSDMES+IRPGCVIL++Y+ + +AWE+
Sbjct: 469 RTGKISFKLFEKDPSQLPNTLRTEIFRWLSSFPSDMESFIRPGCVILSVYVAMSASAWEQ 528
Query: 493 LCCDLTFXXXXXXXXXXXXFWTSGWVYARVQHQIAFIYNGQVVLDTSLPPRSNNYSKILS 552
L + FW++ Q+A +G++ L S R+ N ++++
Sbjct: 529 L--EENLLQRVRSLVQDSEFWSNSRFLVNAGRQLASHKHGRIRLSKSW--RTLNLPELIT 584
Query: 553 VKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQC 612
V P+AV A E V+G NL RL CA G Y E T ++DEL
Sbjct: 585 VSPLAVVAGEETALIVRGRNLTNDGMRLRCAHMGNYASMEVTGR----EHRLTKVDELNV 640
Query: 613 VNFSC-SIPAVT-GRGFIEIEDHGFSSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVE 670
+F S +V+ GR FIE+E+ G FP I+A +C E+ LE EF+ D E
Sbjct: 641 SSFQVQSASSVSLGRCFIELEN-GLRGDNFPLIIANATICKELNRLEE--EFHPKDVIEE 697
Query: 671 RFGKID---TKNQAMDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHE 727
+ +D ++ + + F++E+GWLF R + H +P+ F L RFK+L+ S++ +
Sbjct: 698 QIQNLDRPRSREEVLCFLNELGWLFQRKWTSDI--HGEPD---FSLPRFKFLLVCSVERD 752
Query: 728 WCAVVKKLLHILLD---GTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRF 780
+C++++ +L ++++ G L SLD+ L ++ LL+RA+++ + + + L+ +
Sbjct: 753 YCSLIRTVLDMMVERNLGKDGLLNKESLDM-LADIQLLNRAIKRRNTKMAETLIHY 807
Score = 373 (136.4 bits), Expect = 4.1e-78, Sum P(3) = 4.1e-78
Identities = 69/106 (65%), Positives = 84/106 (79%)
Query: 150 CQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRS 209
CQV++C DLS AKDYHRRHKVCE+HSKA++ALVG MQRFCQQCSRFH+L EFDEGKRS
Sbjct: 82 CQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQRFCQQCSRFHLLSEFDEGKRS 141
Query: 210 CRRRLAGHNKRRRKTNPDAVANG--SSPNNDQTSGYLLISLLRILS 253
CRRRL GHN+RRRKT PDA+ + + N D TS + ++ +L+
Sbjct: 142 CRRRLDGHNRRRRKTQPDAITSQVVALENRDNTSNNTNMDVMALLT 187
Score = 272 (100.8 bits), Expect = 7.5e-56, Sum P(3) = 7.5e-56
Identities = 86/331 (25%), Positives = 159/331 (48%)
Query: 661 EFNRTDADVERFGKIDTKNQAMDFIHEIGWLFHRSQSKSRLG-HLDPNTDLFPLRRFKWL 719
EF+ D E+ +D + + + L Q K H +P+ F L RFK+L
Sbjct: 688 EFHPKDVIEEQIQNLDRPRSREEVLCFLNELGWLFQRKWTSDIHGEPD---FSLPRFKFL 744
Query: 720 IEFSMDHEWCAVVKKLLHILLD---GTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDL 776
+ S++ ++C++++ +L ++++ G L SLD+ L ++ LL+RA+++ + + +
Sbjct: 745 LVCSVERDYCSLIRTVLDMMVERNLGKDGLLNKESLDM-LADIQLLNRAIKRRNTKMAET 803
Query: 777 LLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836
L+ + S N + + F+F P + GP +TP+H+AA S+D++DALT
Sbjct: 804 LIHY----------SVNPST-----RNFIFLPSIAGPGDITPLHLAASTSSSDDMIDALT 848
Query: 837 DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRPNGGHVVVDICGVVP 896
+DP +G+ W D++G TP YA +R ++SY LV +K+ + NG + ++I +
Sbjct: 849 NDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLADKRNG-QISLNIENGID 907
Query: 897 DSNIYQKQNNESTASFEIGQTPVRPTQHNCKLCHQKLGYATASRSLVYKPAMLSMXXXXX 956
+ ++ ++E S T + L +Q+ + SR L P + SM
Sbjct: 908 QIGLSKRLSSELKRSCN--------TCASVALKYQRK--VSGSRRLFPTPIIHSMLAVAT 957
Query: 957 XXXXXXLLFKSCPEVLYVFRPFRWEMLDYGT 987
+ + P V F W LDYG+
Sbjct: 958 VCVCVCVFMHAFPMVRQGSH-FSWGGLDYGS 987
Score = 66 (28.3 bits), Expect = 4.1e-78, Sum P(3) = 4.1e-78
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 29 EWDLNDWKWDGDLFIASKL 47
+W +N WKWDG F A +L
Sbjct: 8 DWQMNRWKWDGQRFEAIEL 26
>TAIR|locus:504956101 [details] [associations]
symbol:SPL8 "squamosa promoter binding protein-like 8"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0009554 "megasporogenesis" evidence=IMP] [GO:0009556
"microsporogenesis" evidence=IMP] [GO:0048653 "anther development"
evidence=IGI] InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0006351 GO:GO:0048653 GO:GO:0009556 EMBL:U89959 GO:GO:0009554
Gene3D:4.10.1100.10 SUPFAM:SSF103612 EMBL:AJ011641 EMBL:AJ011642
EMBL:AK118174 IPI:IPI00535875 PIR:T52594 RefSeq:NP_683267.1
UniGene:At.499 ProteinModelPortal:Q8GXL3 SMR:Q8GXL3
EnsemblPlants:AT1G02065.1 GeneID:839275 KEGG:ath:AT1G02065
GeneFarm:4769 TAIR:At1g02065 eggNOG:NOG260283 HOGENOM:HOG000131786
InParanoid:Q8GXL3 OMA:CHQSASA PhylomeDB:Q8GXL3
ProtClustDB:CLSN2690376 Genevestigator:Q8GXL3 Uniprot:Q8GXL3
Length = 333
Score = 313 (115.2 bits), Expect = 7.1e-27, P = 7.1e-27
Identities = 56/81 (69%), Positives = 63/81 (77%)
Query: 150 CQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRS 209
CQ E C ADLS+AK YHRRHKVCE HSKAS + + QRFCQQCSRFH+L EFD GKRS
Sbjct: 188 CQAEGCNADLSHAKHYHRRHKVCEFHSKASTVVAAGLSQRFCQQCSRFHLLSEFDNGKRS 247
Query: 210 CRRRLAGHNKRRRKTNPDAVA 230
CR+RLA HN+RRRK + A A
Sbjct: 248 CRKRLADHNRRRRKCHQSASA 268
>TAIR|locus:2057656 [details] [associations]
symbol:SPL3 "squamosa promoter binding protein-like 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0010321 "regulation of vegetative
phase change" evidence=IMP] [GO:0010229 "inflorescence development"
evidence=IMP] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IMP] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0009886 "post-embryonic morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
[GO:0048507 "meristem development" evidence=RCA] [GO:0009908
"flower development" evidence=TAS] [GO:0009911 "positive regulation
of flower development" evidence=IMP] InterPro:IPR004333
Pfam:PF03110 PROSITE:PS51141 GO:GO:0005634 GO:GO:0005737
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
GO:GO:0010228 GO:GO:0009908 EMBL:U78721 GO:GO:0010229
Gene3D:4.10.1100.10 SUPFAM:SSF103612 EMBL:Y09427 EMBL:AJ011627
EMBL:AJ242959 EMBL:AJ011633 EMBL:AK118179 EMBL:BT005443
EMBL:AY084312 IPI:IPI00527505 PIR:H84749 PIR:T52597
RefSeq:NP_565771.1 UniGene:At.25364 ProteinModelPortal:P93015
SMR:P93015 STRING:P93015 EnsemblPlants:AT2G33810.1 GeneID:817948
KEGG:ath:AT2G33810 GeneFarm:4764 TAIR:At2g33810 eggNOG:NOG326033
HOGENOM:HOG000005763 InParanoid:P93015 OMA:ESCTADM PhylomeDB:P93015
ProtClustDB:CLSN2719900 Genevestigator:P93015 GermOnline:AT2G33810
GO:GO:0010321 InterPro:IPR017238 PIRSF:PIRSF037575 Uniprot:P93015
Length = 131
Score = 312 (114.9 bits), Expect = 9.1e-27, P = 9.1e-27
Identities = 54/79 (68%), Positives = 62/79 (78%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
VCQVE C AD+S AK YH+RHKVC+ H+KA + + QRFCQQCSRFH L EFDE KR
Sbjct: 53 VCQVESCTADMSKAKQYHKRHKVCQFHAKAPHVRISGLHQRFCQQCSRFHALSEFDEAKR 112
Query: 209 SCRRRLAGHNKRRRKTNPD 227
SCRRRLAGHN+RRRK+ D
Sbjct: 113 SCRRRLAGHNERRRKSTTD 131
>TAIR|locus:2087105 [details] [associations]
symbol:SPL5 "squamosa promoter binding protein-like 5"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010321 "regulation of vegetative
phase change" evidence=IMP] InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 GO:GO:0005634 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AP000413 UniGene:At.28162 UniGene:At.64997
Gene3D:4.10.1100.10 SUPFAM:SSF103612 HOGENOM:HOG000005763
GO:GO:0010321 InterPro:IPR017238 PIRSF:PIRSF037575
ProtClustDB:CLSN2679788 EMBL:AJ011609 EMBL:AJ011610 EMBL:AJ242960
EMBL:AK118611 EMBL:BT003714 IPI:IPI00545460 PIR:T52567 PIR:T52607
RefSeq:NP_188145.1 ProteinModelPortal:Q9S758 SMR:Q9S758
STRING:Q9S758 PRIDE:Q9S758 EnsemblPlants:AT3G15270.1 GeneID:820758
KEGG:ath:AT3G15270 GeneFarm:4766 TAIR:At3g15270 eggNOG:NOG270798
InParanoid:Q9S758 OMA:EEMENGM PhylomeDB:Q9S758
Genevestigator:Q9S758 GermOnline:AT3G15270 Uniprot:Q9S758
Length = 181
Score = 311 (114.5 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 56/85 (65%), Positives = 67/85 (78%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+CQV+ C +L+ AK Y+RRH+VCE+H+KAS A V V QRFCQQCSRFH L EFDE KR
Sbjct: 62 LCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKR 121
Query: 209 SCRRRLAGHNKRRRKTNPDAVANGS 233
SCRRRLAGHN+RRRK + D+ GS
Sbjct: 122 SCRRRLAGHNERRRKISGDSFGEGS 146
>TAIR|locus:2009675 [details] [associations]
symbol:SPL4 "squamosa promoter binding protein-like 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010321 "regulation of vegetative
phase change" evidence=IMP] InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC008007 Gene3D:4.10.1100.10
SUPFAM:SSF103612 HOGENOM:HOG000005763 GO:GO:0010321
InterPro:IPR017238 PIRSF:PIRSF037575 EMBL:AJ011630 EMBL:AJ011631
EMBL:AJ011632 EMBL:BT002856 EMBL:BT004391 EMBL:AY084902
IPI:IPI00539648 PIR:T52599 PIR:T52600 RefSeq:NP_175723.1
RefSeq:NP_974014.1 UniGene:At.496 PDB:1UL4 PDBsum:1UL4
ProteinModelPortal:Q9S7A9 SMR:Q9S7A9 STRING:Q9S7A9
EnsemblPlants:AT1G53160.1 EnsemblPlants:AT1G53160.2 GeneID:841749
KEGG:ath:AT1G53160 GeneFarm:4765 TAIR:At1g53160 eggNOG:NOG268355
InParanoid:Q9S7A9 OMA:ERSRVEM PhylomeDB:Q9S7A9
ProtClustDB:CLSN2679788 EvolutionaryTrace:Q9S7A9
Genevestigator:Q9S7A9 GermOnline:AT1G53160 Uniprot:Q9S7A9
Length = 174
Score = 307 (113.1 bits), Expect = 3.1e-26, P = 3.1e-26
Identities = 56/86 (65%), Positives = 68/86 (79%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+CQV+ C AD+ AK YHRRHKVCE+H+KAS + + QRFCQQCSRFH LQEFDE KR
Sbjct: 53 LCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKR 112
Query: 209 SCRRRLAGHNKRRRKTNPDAV-ANGS 233
SCRRRLAGHN+RRRK++ ++ GS
Sbjct: 113 SCRRRLAGHNERRRKSSGESTYGEGS 138
>TAIR|locus:2059974 [details] [associations]
symbol:SPL9 "squamosa promoter binding protein-like 9"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=IGI]
[GO:0048366 "leaf development" evidence=IMP;IDA] [GO:2000025
"regulation of leaf formation" evidence=IMP] [GO:0048653 "anther
development" evidence=IGI] InterPro:IPR004333 Pfam:PF03110
PROSITE:PS51141 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC002561 GO:GO:0048653 GO:GO:0010228
GO:GO:0048366 GO:GO:2000025 Gene3D:4.10.1100.10 SUPFAM:SSF103612
HOGENOM:HOG000070804 ProtClustDB:CLSN2683909 eggNOG:NOG246953
EMBL:AJ011638 EMBL:AJ011639 EMBL:AJ011640 EMBL:AY046007
EMBL:AY150378 EMBL:AJ628864 IPI:IPI00527975 IPI:IPI00607506
PIR:T00929 PIR:T52593 RefSeq:NP_181749.1 UniGene:At.498
ProteinModelPortal:Q700W2 SMR:Q700W2 STRING:Q700W2 PRIDE:Q700W2
EnsemblPlants:AT2G42200.1 GeneID:818820 KEGG:ath:AT2G42200
GeneFarm:4770 TAIR:At2g42200 InParanoid:Q700W2 OMA:LLSNQPW
PhylomeDB:Q700W2 Genevestigator:Q700W2 Uniprot:Q700W2
Length = 375
Score = 292 (107.8 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 52/81 (64%), Positives = 62/81 (76%)
Query: 150 CQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRS 209
CQVE CG DL+NAK Y+ RH+VC +HSK + V + QRFCQQCSRFH L EFD KRS
Sbjct: 74 CQVEGCGMDLTNAKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRS 133
Query: 210 CRRRLAGHNKRRRKTNPDAVA 230
CRRRLAGHN+RRRK P +++
Sbjct: 134 CRRRLAGHNERRRKPQPASLS 154
Score = 40 (19.1 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 616 SCSIPAVTGRGFIEIEDHGFSS 637
+C I + T G E+ DH S
Sbjct: 330 NCQISSGTAMGEFELSDHHHQS 351
>TAIR|locus:2026428 [details] [associations]
symbol:AT1G69170 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC008262 EMBL:AC018364
Gene3D:4.10.1100.10 SUPFAM:SSF103612 EMBL:AJ011643 EMBL:AJ011644
EMBL:AF370612 EMBL:BT006436 EMBL:AK227964 IPI:IPI00543714
PIR:T52592 RefSeq:NP_177077.3 UniGene:At.500
ProteinModelPortal:Q94JW8 SMR:Q94JW8 IntAct:Q94JW8 STRING:Q94JW8
PRIDE:Q94JW8 EnsemblPlants:AT1G69170.1 GeneID:843248
KEGG:ath:AT1G69170 GeneFarm:4767 TAIR:At1g69170 eggNOG:NOG312344
HOGENOM:HOG000154391 InParanoid:Q94JW8 OMA:SSRTYES PhylomeDB:Q94JW8
ProtClustDB:CLSN2918436 Genevestigator:Q94JW8 GermOnline:AT1G69170
Uniprot:Q94JW8
Length = 405
Score = 305 (112.4 bits), Expect = 5.1e-26, P = 5.1e-26
Identities = 53/75 (70%), Positives = 62/75 (82%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+CQV C DLS++KDYH+RH+VCE HSK S +V + QRFCQQCSRFH L EFD+GKR
Sbjct: 123 LCQVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKR 182
Query: 209 SCRRRLAGHNKRRRK 223
SCRRRLAGHN+RRRK
Sbjct: 183 SCRRRLAGHNERRRK 197
>TAIR|locus:2169248 [details] [associations]
symbol:SPL2 "squamosa promoter binding protein-like 2"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0048510 "regulation of timing
of transition from vegetative to reproductive phase" evidence=IMP]
[GO:0048653 "anther development" evidence=IGI] InterPro:IPR004333
Pfam:PF03110 PROSITE:PS51141 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0048653 GO:GO:0048510 EMBL:AB017070
Gene3D:4.10.1100.10 SUPFAM:SSF103612 HOGENOM:HOG000070897
EMBL:AJ011624 EMBL:AJ011625 EMBL:AJ011626 EMBL:BT025984
EMBL:AK230160 IPI:IPI00531293 PIR:T52603 PIR:T52604
RefSeq:NP_199141.1 RefSeq:NP_851122.1 RefSeq:NP_974875.1
UniGene:At.47249 ProteinModelPortal:Q9S840 SMR:Q9S840 STRING:Q9S840
PRIDE:Q9S840 EnsemblPlants:AT5G43270.1 EnsemblPlants:AT5G43270.2
EnsemblPlants:AT5G43270.3 GeneID:834345 KEGG:ath:AT5G43270
GeneFarm:4763 TAIR:At5g43270 eggNOG:NOG246953 InParanoid:Q9S840
OMA:VERRFCQ PhylomeDB:Q9S840 ProtClustDB:CLSN2686808
Genevestigator:Q9S840 GermOnline:AT5G43270 Uniprot:Q9S840
Length = 419
Score = 307 (113.1 bits), Expect = 6.2e-26, P = 6.2e-26
Identities = 56/89 (62%), Positives = 65/89 (73%)
Query: 150 CQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRS 209
CQVE C DLS+AKDYHR+H++CE HSK + +V V +RFCQQCSRFH L EFDE KRS
Sbjct: 169 CQVEGCNLDLSSAKDYHRKHRICENHSKFPKVVVSGVERRFCQQCSRFHCLSEFDEKKRS 228
Query: 210 CRRRLAGHNKRRRKTNPDAVANGSSPNND 238
CRRRL+ HN RRRK NP +G P D
Sbjct: 229 CRRRLSDHNARRRKPNPGRTYDGK-PQVD 256
>TAIR|locus:2159717 [details] [associations]
symbol:SPL13A "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE
13A" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0048653 "anther development"
evidence=IMP] InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048653
EMBL:AB025619 EMBL:AK117475 EMBL:AK317730 EMBL:AY084609
IPI:IPI00537325 RefSeq:NP_568731.1 RefSeq:NP_568740.1
RefSeq:NP_851161.1 UniGene:At.29720 UniGene:At.66677
ProteinModelPortal:B9DI20 SMR:B9DI20 EnsemblPlants:AT5G50570.1
EnsemblPlants:AT5G50570.2 EnsemblPlants:AT5G50670.1 GeneID:835126
GeneID:835138 KEGG:ath:AT5G50570 KEGG:ath:AT5G50670 GeneFarm:4774
TAIR:At5g50570 eggNOG:NOG240434 PhylomeDB:B9DI20
ProtClustDB:CLSN2689975 GermOnline:AT5G50570 Gene3D:4.10.1100.10
SUPFAM:SSF103612 Uniprot:B9DI20
Length = 359
Score = 297 (109.6 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 55/108 (50%), Positives = 70/108 (64%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+C V+ C +D SN ++YH+RHKVC++HSK + QRFCQQCSRFH L+EFDEGKR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159
Query: 209 SCRRRLAGHNKRRRKTNPDAVANGSSPNNDQTSGYLLISLLRILSNMH 256
SCR+RL GHN+RRRK P+ + P N T G+ LL H
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHIGR---PANFFT-GFQGSKLLEFSGGSH 203
>TAIR|locus:2832472 [details] [associations]
symbol:SPL13B "SQUAMOSA PROMOTER-BINDING PROTEIN LIKE
13B" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0048653 "anther development" evidence=IMP] InterPro:IPR004333
Pfam:PF03110 PROSITE:PS51141 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0006351 GO:GO:0048653 EMBL:AB023037 IPI:IPI00537325
RefSeq:NP_568731.1 RefSeq:NP_568740.1 RefSeq:NP_851161.1
UniGene:At.29720 UniGene:At.66677 GeneID:835126 GeneID:835138
KEGG:ath:AT5G50570 KEGG:ath:AT5G50670 eggNOG:NOG240434
Gene3D:4.10.1100.10 SUPFAM:SSF103612 ProteinModelPortal:P0DI11
SMR:P0DI11 GeneFarm:4775 TAIR:At5g50670 PhylomeDB:P0DI11
Uniprot:P0DI11
Length = 359
Score = 297 (109.6 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 55/108 (50%), Positives = 70/108 (64%)
Query: 149 VCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKR 208
+C V+ C +D SN ++YH+RHKVC++HSK + QRFCQQCSRFH L+EFDEGKR
Sbjct: 100 ICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKR 159
Query: 209 SCRRRLAGHNKRRRKTNPDAVANGSSPNNDQTSGYLLISLLRILSNMH 256
SCR+RL GHN+RRRK P+ + P N T G+ LL H
Sbjct: 160 SCRKRLDGHNRRRRKPQPEHIGR---PANFFT-GFQGSKLLEFSGGSH 203
>TAIR|locus:2095793 [details] [associations]
symbol:SPL15 "squamosa promoter binding protein-like 15"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=IGI]
[GO:0008361 "regulation of cell size" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0048653
"anther development" evidence=IGI] [GO:0009827 "plant-type cell
wall modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0008361
GO:GO:0042127 GO:GO:0048653 GO:GO:0010228 EMBL:AL132977
Gene3D:4.10.1100.10 SUPFAM:SSF103612 EMBL:AY086384 IPI:IPI00532394
PIR:T46014 RefSeq:NP_191351.1 UniGene:At.34784
ProteinModelPortal:Q9M2Q6 SMR:Q9M2Q6 EnsemblPlants:AT3G57920.1
GeneID:824961 KEGG:ath:AT3G57920 GeneFarm:4777 TAIR:At3g57920
eggNOG:NOG301654 HOGENOM:HOG000070804 InParanoid:Q9M2Q6 OMA:LACHNER
PhylomeDB:Q9M2Q6 ProtClustDB:CLSN2683909 Genevestigator:Q9M2Q6
GermOnline:AT3G57920 Uniprot:Q9M2Q6
Length = 354
Score = 282 (104.3 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 53/79 (67%), Positives = 60/79 (75%)
Query: 148 AVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGK 207
A CQVE C DLSN K Y+ RHKVC +HSK+S+ +V + QRFCQQCSRFH L EFD K
Sbjct: 57 ARCQVEGCRMDLSNVKAYYSRHKVCCIHSKSSKVIVSGLHQRFCQQCSRFHQLSEFDLEK 116
Query: 208 RSCRRRLAGHNKRRRKTNP 226
RSCRRRLA HN+RRRK P
Sbjct: 117 RSCRRRLACHNERRRKPQP 135
>TAIR|locus:2016014 [details] [associations]
symbol:SPL10 "squamosa promoter binding protein-like 10"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010358 "leaf shaping"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048510
EMBL:AC004557 GO:GO:0010358 Gene3D:4.10.1100.10 SUPFAM:SSF103612
EMBL:AJ011636 EMBL:AJ011637 EMBL:AY074853 EMBL:AY142028
IPI:IPI00546520 PIR:T52596 RefSeq:NP_001031096.2
RefSeq:NP_001077605.1 RefSeq:NP_174057.2 RefSeq:NP_973921.1
UniGene:At.21970 ProteinModelPortal:Q8S9L0 SMR:Q8S9L0
EnsemblPlants:AT1G27370.1 EnsemblPlants:AT1G27370.2
EnsemblPlants:AT1G27370.3 EnsemblPlants:AT1G27370.4 GeneID:839626
KEGG:ath:AT1G27370 GeneFarm:4771 TAIR:At1g27370 eggNOG:NOG298579
HOGENOM:HOG000070897 InParanoid:Q8S9L0 OMA:STEWEFE PhylomeDB:Q8S9L0
ProtClustDB:CLSN2688014 Genevestigator:Q8S9L0 Uniprot:Q8S9L0
Length = 396
Score = 277 (102.6 bits), Expect = 7.8e-22, Sum P(2) = 7.8e-22
Identities = 46/74 (62%), Positives = 59/74 (79%)
Query: 150 CQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRS 209
CQ++ C DLS++KDYHR+H+VCE HSK + +V + +RFCQQCSRFH + EFDE KRS
Sbjct: 176 CQIDGCELDLSSSKDYHRKHRVCETHSKCPKVVVSGLERRFCQQCSRFHAVSEFDEKKRS 235
Query: 210 CRRRLAGHNKRRRK 223
CR+RL+ HN RRRK
Sbjct: 236 CRKRLSHHNARRRK 249
Score = 39 (18.8 bits), Expect = 7.8e-22, Sum P(2) = 7.8e-22
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 6 RGEAHHFYGMNSMDLRAVGKKTL 28
R + F+G N+ DL AV L
Sbjct: 132 RTYSEEFWGRNNNDLSAVSMNLL 154
>TAIR|locus:2015999 [details] [associations]
symbol:SPL11 "squamosa promoter-like 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IMP]
InterPro:IPR004333 Pfam:PF03110 PROSITE:PS51141 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048510 EMBL:AC004557
Gene3D:4.10.1100.10 SUPFAM:SSF103612 HOGENOM:HOG000070897
ProtClustDB:CLSN2688014 EMBL:AJ011634 EMBL:AJ011635 EMBL:AY070106
EMBL:AY091286 EMBL:AY088185 IPI:IPI00527344 PIR:B86399 PIR:T52598
RefSeq:NP_001077603.1 RefSeq:NP_001077604.1 RefSeq:NP_564280.1
RefSeq:NP_973920.1 UniGene:At.497 ProteinModelPortal:Q9FZK0
SMR:Q9FZK0 IntAct:Q9FZK0 STRING:Q9FZK0 EnsemblPlants:AT1G27360.1
EnsemblPlants:AT1G27360.2 EnsemblPlants:AT1G27360.3
EnsemblPlants:AT1G27360.4 GeneID:839625 KEGG:ath:AT1G27360
GeneFarm:4772 TAIR:At1g27360 eggNOG:NOG312846 InParanoid:Q9FZK0
OMA:RCKLASE PhylomeDB:Q9FZK0 Genevestigator:Q9FZK0
GermOnline:AT1G27360 Uniprot:Q9FZK0
Length = 393
Score = 273 (101.2 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 47/74 (63%), Positives = 57/74 (77%)
Query: 150 CQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRS 209
CQ++ C DLS+AK YHR+HKVCE HSK + V + +RFCQQCSRFH + EFDE KRS
Sbjct: 175 CQIDGCELDLSSAKGYHRKHKVCEKHSKCPKVSVSGLERRFCQQCSRFHAVSEFDEKKRS 234
Query: 210 CRRRLAGHNKRRRK 223
CR+RL+ HN RRRK
Sbjct: 235 CRKRLSHHNARRRK 248
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 988 897 0.00088 122 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 633 (67 KB)
Total size of DFA: 479 KB (2223 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 73.38u 0.10s 73.48t Elapsed: 00:00:48
Total cpu time: 73.38u 0.10s 73.48t Elapsed: 00:00:49
Start: Fri May 10 00:01:14 2013 End: Fri May 10 00:02:03 2013