Query 001971
Match_columns 988
No_of_seqs 451 out of 1805
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 06:51:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001971.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001971hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ul4_A SPL4, squamosa promoter 100.0 6.4E-39 2.2E-43 292.2 -0.1 90 141-230 2-91 (94)
2 1ul5_A SPL7, squamosa promoter 100.0 1.2E-37 4E-42 281.1 -0.6 83 146-228 2-84 (88)
3 1wj0_A Squamosa promoter-bindi 99.9 9.6E-29 3.3E-33 209.0 1.7 59 146-204 2-60 (60)
4 4gpm_A Engineered protein OR26 99.9 9.8E-23 3.4E-27 203.0 16.1 155 677-882 8-163 (169)
5 1oy3_D Transcription factor in 99.9 1.1E-22 3.8E-27 210.0 16.7 202 637-882 8-252 (282)
6 2rfa_A Transient receptor pote 99.9 9.9E-22 3.4E-26 198.9 17.1 205 639-882 4-224 (232)
7 2f8y_A Notch homolog 1, transl 99.9 1.5E-21 5.2E-26 196.0 17.5 192 638-882 25-218 (223)
8 1yyh_A HN1;, notch 1, ankyrin 99.9 1.7E-21 5.9E-26 201.7 16.2 189 637-878 56-246 (253)
9 3hra_A Ankyrin repeat family p 99.9 2.1E-21 7.3E-26 191.9 15.8 188 639-878 6-201 (201)
10 1k1a_A B-cell lymphoma 3-encod 99.9 4.9E-21 1.7E-25 193.6 18.5 196 638-882 9-210 (241)
11 1yyh_A HN1;, notch 1, ankyrin 99.9 1.9E-21 6.4E-26 201.4 15.3 195 638-882 10-217 (253)
12 2xai_A ASB-9, ankyrin repeat a 99.9 2.7E-21 9.4E-26 201.4 16.6 190 638-882 3-193 (261)
13 3b7b_A Euchromatic histone-lys 99.9 5.5E-21 1.9E-25 193.7 18.3 193 637-881 10-203 (237)
14 3aji_A 26S proteasome non-ATPa 99.9 2.2E-21 7.5E-26 195.9 15.3 189 639-880 7-197 (231)
15 2dzn_A Probable 26S proteasome 99.9 4.5E-21 1.5E-25 192.8 17.4 196 639-882 3-202 (228)
16 3aji_A 26S proteasome non-ATPa 99.9 7.8E-21 2.7E-25 191.8 18.4 191 637-880 39-230 (231)
17 3v31_A Ankyrin repeat family A 99.9 5.4E-21 1.9E-25 184.8 16.2 160 672-882 2-162 (167)
18 3v30_A DNA-binding protein rfx 99.9 7.6E-21 2.6E-25 184.6 17.0 158 674-882 3-162 (172)
19 3ljn_A Hypothetical protein; a 99.8 4E-21 1.4E-25 208.4 14.7 131 715-880 137-269 (364)
20 3utm_A Tankyrase-1; tankyrase, 99.8 1.4E-20 4.6E-25 199.6 18.4 201 638-882 58-307 (351)
21 1ikn_D Protein (I-kappa-B-alph 99.8 1E-21 3.4E-26 200.2 9.0 198 638-882 8-211 (236)
22 1ihb_A P18-INK4C(INK6), cyclin 99.8 6.6E-21 2.3E-25 182.5 13.8 156 673-880 5-162 (162)
23 2rfm_A Putative ankyrin repeat 99.8 7.4E-21 2.5E-25 188.3 14.5 158 670-878 32-190 (192)
24 3jxi_A Vanilloid receptor-rela 99.8 2.7E-21 9.2E-26 199.4 11.2 195 656-882 25-252 (260)
25 4b93_B Ankyrin repeat domain-c 99.8 1.1E-20 3.7E-25 200.5 15.6 200 640-892 13-225 (269)
26 2etb_A Transient receptor pote 99.8 6E-21 2.1E-25 196.8 13.1 196 655-881 21-247 (256)
27 2f8y_A Notch homolog 1, transl 99.8 8.9E-21 3E-25 190.4 14.0 174 659-882 10-185 (223)
28 1wdy_A 2-5A-dependent ribonucl 99.8 3.4E-20 1.2E-24 190.3 18.4 202 638-882 72-280 (285)
29 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.9E-20 1E-24 181.1 16.3 155 673-878 14-169 (169)
30 3d9h_A CDNA FLJ77766, highly s 99.8 2.6E-20 8.9E-25 197.4 17.2 192 636-882 57-249 (285)
31 1k1a_A B-cell lymphoma 3-encod 99.8 3E-21 1E-25 195.2 9.3 194 638-879 46-240 (241)
32 2fo1_E LIN-12 protein; beta-ba 99.8 1E-20 3.5E-25 208.3 14.2 204 637-881 165-372 (373)
33 4gpm_A Engineered protein OR26 99.8 2.8E-20 9.7E-25 185.3 15.6 126 717-882 5-130 (169)
34 1awc_B Protein (GA binding pro 99.8 3.2E-20 1.1E-24 177.7 15.0 149 675-875 4-153 (153)
35 4hbd_A KN motif and ankyrin re 99.8 2.3E-20 7.8E-25 197.6 14.7 181 648-879 84-274 (276)
36 1n11_A Ankyrin; clathrin, BAND 99.8 4.6E-20 1.6E-24 204.6 17.8 187 639-878 213-400 (437)
37 2rfa_A Transient receptor pote 99.8 4.2E-20 1.5E-24 186.9 16.0 176 673-881 3-184 (232)
38 1n11_A Ankyrin; clathrin, BAND 99.8 5.5E-20 1.9E-24 203.9 18.3 192 638-882 179-371 (437)
39 2pnn_A Transient receptor pote 99.8 2.2E-20 7.4E-25 194.8 14.0 207 639-882 14-260 (273)
40 1d9s_A Cyclin-dependent kinase 99.8 8.5E-21 2.9E-25 178.9 9.9 125 715-880 11-136 (136)
41 4b93_B Ankyrin repeat domain-c 99.8 3.6E-21 1.2E-25 204.2 7.9 183 639-876 53-237 (269)
42 2jab_A H10-2-G3; HER2, darpin, 99.8 3.7E-20 1.3E-24 174.5 13.8 124 715-878 13-136 (136)
43 3twr_A Tankyrase-2; ankyrin re 99.8 1.6E-20 5.6E-25 181.1 11.6 157 672-879 7-164 (165)
44 3b7b_A Euchromatic histone-lys 99.8 5.4E-20 1.9E-24 186.4 15.6 188 638-878 44-233 (237)
45 1n0r_A 4ANK, 4 ankyrin repeats 99.8 9.5E-20 3.2E-24 165.8 14.7 125 716-880 2-126 (126)
46 1oy3_D Transcription factor in 99.8 7.6E-20 2.6E-24 188.8 15.0 189 670-882 6-219 (282)
47 1s70_B 130 kDa myosin-binding 99.8 4E-20 1.4E-24 193.7 12.6 215 639-892 41-272 (299)
48 3f6q_A Integrin-linked protein 99.8 7.5E-20 2.6E-24 179.5 12.8 159 673-882 5-165 (179)
49 1wdy_A 2-5A-dependent ribonucl 99.8 4E-19 1.4E-23 182.4 18.1 200 638-880 39-245 (285)
50 2etb_A Transient receptor pote 99.8 1.4E-19 4.9E-24 186.5 14.8 135 715-881 42-207 (256)
51 1bi7_B P16INK4A, MTS1, multipl 99.8 2.3E-20 7.7E-25 179.9 8.1 127 715-882 11-138 (156)
52 3kea_A K1L; tropism, ANK repea 99.8 5.8E-20 2E-24 195.1 11.3 190 638-884 31-224 (285)
53 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.8E-19 9.7E-24 170.5 14.5 150 675-877 4-155 (156)
54 1s70_B 130 kDa myosin-binding 99.8 3E-19 1E-23 187.1 15.9 161 672-882 39-226 (299)
55 3d9h_A CDNA FLJ77766, highly s 99.8 1.3E-19 4.5E-24 192.0 13.3 188 638-882 92-281 (285)
56 3eu9_A Huntingtin-interacting 99.8 2.9E-19 1E-23 179.3 14.8 214 639-881 10-236 (240)
57 1awc_B Protein (GA binding pro 99.8 4.1E-19 1.4E-23 169.9 15.0 125 716-881 2-126 (153)
58 3twr_A Tankyrase-2; ankyrin re 99.8 4.6E-19 1.6E-23 170.9 15.1 129 715-882 7-135 (165)
59 2pnn_A Transient receptor pote 99.8 1.2E-19 4.2E-24 189.1 11.7 178 668-882 8-220 (273)
60 2xai_A ASB-9, ankyrin repeat a 99.8 5.8E-19 2E-23 183.9 16.7 159 672-882 2-161 (261)
61 3eu9_A Huntingtin-interacting 99.8 6E-19 2E-23 177.0 16.1 185 670-880 6-202 (240)
62 3v30_A DNA-binding protein rfx 99.8 5.7E-19 2E-23 171.4 14.5 127 717-882 3-129 (172)
63 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.6E-19 5.3E-24 186.4 10.8 159 672-882 4-166 (239)
64 3ljn_A Hypothetical protein; a 99.8 3E-19 1E-23 193.7 13.5 199 638-882 20-238 (364)
65 2dzn_A Probable 26S proteasome 99.8 1.3E-18 4.3E-23 174.9 17.0 161 673-878 2-163 (228)
66 2rfm_A Putative ankyrin repeat 99.8 5.1E-19 1.7E-23 175.1 13.7 127 716-882 35-161 (192)
67 4g8k_A 2-5A-dependent ribonucl 99.8 1.3E-18 4.3E-23 186.9 17.6 173 669-881 121-299 (337)
68 3hra_A Ankyrin repeat family p 99.8 1.3E-18 4.5E-23 171.8 16.3 161 672-882 4-172 (201)
69 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.1E-18 3.8E-23 169.9 15.5 126 716-881 14-139 (169)
70 3utm_A Tankyrase-1; tankyrase, 99.8 1.8E-18 6.3E-23 183.2 18.4 206 641-882 27-274 (351)
71 1ikn_D Protein (I-kappa-B-alph 99.8 2.4E-19 8.1E-24 182.7 11.1 172 670-882 5-178 (236)
72 3v31_A Ankyrin repeat family A 99.8 6.8E-19 2.3E-23 170.1 13.8 126 716-881 3-128 (167)
73 3f6q_A Integrin-linked protein 99.8 8.6E-19 3E-23 171.9 14.3 127 716-881 5-131 (179)
74 3jxi_A Vanilloid receptor-rela 99.8 3.9E-19 1.3E-23 183.3 12.4 134 716-881 46-211 (260)
75 1ihb_A P18-INK4C(INK6), cyclin 99.8 3.9E-19 1.3E-23 170.2 11.3 125 715-880 4-128 (162)
76 2fo1_E LIN-12 protein; beta-ba 99.8 1.5E-18 5.2E-23 191.0 16.9 186 658-882 151-340 (373)
77 3c5r_A BARD-1, BRCA1-associate 99.8 1.3E-19 4.4E-24 170.3 6.2 126 714-879 8-133 (137)
78 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.1E-18 3.7E-23 154.4 11.2 92 758-880 2-93 (93)
79 1dcq_A PYK2-associated protein 99.8 3.2E-18 1.1E-22 182.8 16.7 140 717-891 131-273 (278)
80 3aaa_C Myotrophin, protein V-1 99.8 1.6E-18 5.5E-23 160.3 12.4 116 716-874 7-122 (123)
81 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.1E-18 7.3E-23 164.4 13.4 123 715-877 1-123 (156)
82 3kea_A K1L; tropism, ANK repea 99.8 2.1E-18 7.2E-23 183.1 14.2 158 670-882 28-188 (285)
83 3deo_A Signal recognition part 99.7 2.9E-18 9.8E-23 169.7 11.2 110 715-865 43-153 (183)
84 3t8k_A Uncharacterized protein 99.7 1.8E-18 6.1E-23 174.6 9.9 128 715-882 37-181 (186)
85 2vge_A RELA-associated inhibit 99.7 2.5E-18 8.4E-23 178.0 10.9 127 716-882 21-150 (229)
86 1ycs_B 53BP2, P53BP2; ankyrin 99.7 2.1E-18 7.3E-23 177.9 10.3 126 716-882 5-130 (239)
87 3ehr_A Osteoclast-stimulating 99.7 1.6E-18 5.6E-23 175.6 8.4 128 716-882 73-200 (222)
88 4hbd_A KN motif and ankyrin re 99.7 7.4E-18 2.5E-22 178.4 13.3 159 673-881 76-243 (276)
89 3ui2_A Signal recognition part 99.7 5.6E-18 1.9E-22 176.2 12.1 125 715-880 44-185 (244)
90 4g8k_A 2-5A-dependent ribonucl 99.7 2.3E-17 7.9E-22 177.0 16.6 205 640-877 27-261 (337)
91 3lvq_E ARF-GAP with SH3 domain 99.7 1E-17 3.6E-22 192.2 14.7 131 718-882 134-267 (497)
92 1sw6_A Regulatory protein SWI6 99.7 9.5E-18 3.3E-22 181.7 13.5 184 651-882 58-310 (327)
93 2b0o_E UPLC1; arfgap, structur 99.7 3.1E-17 1.1E-21 177.3 14.6 131 717-881 152-285 (301)
94 1sw6_A Regulatory protein SWI6 99.7 7.6E-18 2.6E-22 182.5 8.6 185 656-866 113-327 (327)
95 3jue_A Arfgap with coiled-coil 99.7 6.7E-17 2.3E-21 180.7 13.7 126 717-880 200-326 (368)
96 2l6b_A NR1C; ankyrin, consensu 99.7 9.1E-17 3.1E-21 146.5 9.1 97 754-881 5-101 (115)
97 3c5r_A BARD-1, BRCA1-associate 99.7 2E-16 6.9E-21 148.5 11.5 98 754-882 6-103 (137)
98 3aaa_C Myotrophin, protein V-1 99.7 2.5E-16 8.5E-21 145.5 11.7 94 757-881 6-99 (123)
99 1bi7_B P16INK4A, MTS1, multipl 99.7 9.7E-17 3.3E-21 154.5 8.3 141 670-862 9-151 (156)
100 2zgd_A 3 repeat synthetic anky 99.6 5.7E-16 1.9E-20 141.8 9.8 90 755-875 21-110 (110)
101 2jab_A H10-2-G3; HER2, darpin, 99.6 6E-16 2E-20 145.7 10.1 95 756-881 12-106 (136)
102 3t8k_A Uncharacterized protein 99.6 9.8E-17 3.4E-21 161.9 5.0 124 718-882 8-148 (186)
103 1d9s_A Cyclin-dependent kinase 99.6 4.6E-16 1.6E-20 146.5 8.7 95 755-881 9-104 (136)
104 2vge_A RELA-associated inhibit 99.6 1.3E-15 4.5E-20 157.6 10.8 97 755-882 18-114 (229)
105 1n0r_A 4ANK, 4 ankyrin repeats 99.6 2.2E-15 7.5E-20 136.9 10.8 93 758-881 2-94 (126)
106 3ehr_A Osteoclast-stimulating 99.6 3E-15 1E-19 151.6 11.4 97 756-882 71-167 (222)
107 2l6b_A NR1C; ankyrin, consensu 99.6 2.3E-15 7.9E-20 137.2 8.0 105 715-859 8-112 (115)
108 2aja_A Ankyrin repeat family p 99.6 2E-16 6.7E-21 177.3 -0.2 155 673-881 92-251 (376)
109 2b0o_E UPLC1; arfgap, structur 99.6 3E-15 1E-19 161.7 8.2 143 675-868 153-299 (301)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.6 1.4E-14 4.9E-19 127.9 10.5 89 716-838 2-90 (93)
111 2aja_A Ankyrin repeat family p 99.5 6.7E-16 2.3E-20 173.0 1.4 129 717-880 93-224 (376)
112 3deo_A Signal recognition part 99.5 1.4E-14 4.7E-19 143.3 10.5 94 756-881 42-136 (183)
113 3ui2_A Signal recognition part 99.5 2.4E-14 8.2E-19 148.8 9.6 94 757-882 44-138 (244)
114 3lvq_E ARF-GAP with SH3 domain 99.4 2.2E-13 7.6E-18 156.4 11.7 139 675-864 134-276 (497)
115 3jue_A Arfgap with coiled-coil 99.4 1E-12 3.6E-17 146.9 10.5 94 758-882 199-295 (368)
116 1dcq_A PYK2-associated protein 99.3 2.9E-12 1E-16 136.8 10.6 100 758-882 130-232 (278)
117 2zgd_A 3 repeat synthetic anky 99.3 3.6E-12 1.2E-16 116.5 9.6 87 715-835 23-109 (110)
118 1uad_C RSEC5, exocyst complex 53.5 30 0.001 31.6 6.9 39 547-587 7-46 (99)
119 2cxk_A Camta1, calmodulin bind 32.6 66 0.0023 29.3 5.7 45 547-592 6-50 (95)
120 4hw6_A Hypothetical protein, I 25.9 1E+02 0.0034 34.6 6.9 70 544-631 15-85 (433)
121 3tc9_A Hypothetical hydrolase; 21.7 1.5E+02 0.0052 33.0 7.3 38 548-587 18-55 (430)
No 1
>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=6.4e-39 Score=292.19 Aligned_cols=90 Identities=63% Similarity=1.073 Sum_probs=80.5
Q ss_pred CCCCCCCCceeccCCchhhccChhhhccccchhhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhh
Q 001971 141 GGGSSSRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKR 220 (988)
Q Consensus 141 ~~~~~~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~r 220 (988)
++++++.++||||||++||+.+|.||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+|
T Consensus 2 ~~~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~R 81 (94)
T 1ul4_A 2 SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNER 81 (94)
T ss_dssp ------CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCC
T ss_pred CCCCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCcC
Q 001971 221 RRKTNPDAVA 230 (988)
Q Consensus 221 rr~~~~~~~~ 230 (988)
|||+++++..
T Consensus 82 RRk~~~~~~~ 91 (94)
T 1ul4_A 82 RRKSSGESGP 91 (94)
T ss_dssp CCSCCCC---
T ss_pred hccCCCCcCC
Confidence 9999998764
No 2
>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=1.2e-37 Score=281.12 Aligned_cols=83 Identities=52% Similarity=0.962 Sum_probs=79.5
Q ss_pred CCCceeccCCchhhccChhhhccccchhhhcCcceeeeCCcchhhhhhhccCcccccccCccchHHHHHhhhhhhhccCC
Q 001971 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTN 225 (988)
Q Consensus 146 ~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd~~krsCr~~L~~hn~rrr~~~ 225 (988)
+.++||||||++||+.+|+||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||||++
T Consensus 2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~ 81 (88)
T 1ul5_A 2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP 81 (88)
T ss_dssp -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 001971 226 PDA 228 (988)
Q Consensus 226 ~~~ 228 (988)
++.
T Consensus 82 ~~~ 84 (88)
T 1ul5_A 82 VDK 84 (88)
T ss_dssp CSS
T ss_pred ccC
Confidence 775
No 3
>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.94 E-value=9.6e-29 Score=208.98 Aligned_cols=59 Identities=78% Similarity=1.372 Sum_probs=57.1
Q ss_pred CCCceeccCCchhhccChhhhccccchhhhcCcceeeeCCcchhhhhhhccCccccccc
Q 001971 146 SRAVCQVEDCGADLSNAKDYHRRHKVCEMHSKASRALVGNVMQRFCQQCSRFHVLQEFD 204 (988)
Q Consensus 146 ~~~~Cqv~gC~~~l~~~k~y~~R~~vC~~H~ka~~v~~~G~~~RfCQqC~rfh~l~eFd 204 (988)
+.++|||+||++||+.+|+|||||||||.|+||++|+++|.++||||||+|||+|+|||
T Consensus 2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD 60 (60)
T 1wj0_A 2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60 (60)
T ss_dssp -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence 46899999999999999999999999999999999999999999999999999999998
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=9.8e-23 Score=203.04 Aligned_cols=155 Identities=23% Similarity=0.209 Sum_probs=127.7
Q ss_pred cHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhc
Q 001971 677 TKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLA 755 (988)
Q Consensus 677 lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~ 755 (988)
+..+| .+.+..+.+||+++......+ ...+++|++|+..++..+++.||+..++.+ ..+
T Consensus 8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d-----------~~g~t~l~~a~~~~~~~~~~~ll~~gad~~---------~~d 67 (169)
T 4gpm_A 8 LIEAAENGNKDRVKDLIENGADVNASD-----------SDGRTPLHHAAENGHKEVVKLLISKGADVN---------AKD 67 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCC
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcC-----------CCCCCHHHHHHHcCCHHHHHHHHhcccchh---------hhc
Confidence 44455 466667777777764322222 235889999999999999999998654321 134
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHh
Q 001971 756 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (988)
Q Consensus 756 l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lL 835 (988)
..|+||||+|++.|+.++|++||++ |+ ++|.+|..|+||||+||. .|+.++|++|
T Consensus 68 ~~g~TpLh~A~~~g~~~~v~~Ll~~-------ga-----------------dvn~~d~~G~TpLh~A~~-~g~~~~v~~L 122 (169)
T 4gpm_A 68 SDGRTPLHHAAENGHKEVVKLLISK-------GA-----------------DVNAKDSDGRTPLHHAAE-NGHKEVVKLL 122 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHC-------cC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 5689999999999999999999999 88 899999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 836 TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 836 L~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
+++ ||+++.+|.+|+||||+|+.+|+.+++++|+++|++..
T Consensus 123 l~~------gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie 163 (169)
T 4gpm_A 123 ISK------GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLE 163 (169)
T ss_dssp HHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-----
T ss_pred HHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC
Confidence 999 99999999999999999999999999999999999875
No 5
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.89 E-value=1.1e-22 Score=209.97 Aligned_cols=202 Identities=18% Similarity=0.101 Sum_probs=162.4
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCc---chhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcc
Q 001971 637 STFFPFIVAEEDVCSEIRMLESALEFNRT---DADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 712 (988)
Q Consensus 637 s~ffP~LVad~~iCsEI~~LE~~le~~a~---~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~q 712 (988)
.+..|+++|... +.+..++.+++.++. ....+..|.+++|.+| .+.+..+.+|++++......+
T Consensus 8 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~---------- 75 (282)
T 1oy3_D 8 DGDTALHLAVIH--QHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE---------- 75 (282)
T ss_dssp TCCCHHHHHHHT--TCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC----------
T ss_pred CCCcHHHHHHHc--CCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC----------
Confidence 347888887764 777888888887776 2233567899999999 588999999999875322222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccccccCCC--------------------------------------CCchhh
Q 001971 713 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE--------------------------------------HPSLDL 754 (988)
Q Consensus 713 i~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~--------------------------------------~~~l~~ 754 (988)
....+|||+|+..++.++++.|++...+....... ......
T Consensus 76 -~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (282)
T 1oy3_D 76 -RGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAE 154 (282)
T ss_dssp -TTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCC
T ss_pred -CCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCc
Confidence 23578999999999999999999865431110000 000112
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCC-CChHHHHHHhhCCCHHHHH
Q 001971 755 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPA-GLTPIHIAAGKDGSEDVLD 833 (988)
Q Consensus 755 ~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~-G~TPLHiAA~~~G~~eVV~ 833 (988)
+..|.||||+|++.|+.++|++||++ |+ ++|..+.. |.||||+|+. .|+.++|+
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~ 209 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLRDA-------GA-----------------DLNKPEPTCGRTPLHLAVE-AQAASVLE 209 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHH-------TC-----------------CTTCCCTTTCCCHHHHHHH-TTCHHHHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCcCHHHHHHH-cCCHHHHH
Confidence 44688999999999999999999999 77 78888754 9999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 834 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 834 lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
+|+++ |++++.+|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 210 ~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 252 (282)
T 1oy3_D 210 LLLKA------GADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252 (282)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCC
T ss_pred HHHHc------CCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcC
Confidence 99999 99999999999999999999999999999999998755
No 6
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=9.9e-22 Score=198.93 Aligned_cols=205 Identities=15% Similarity=0.096 Sum_probs=160.4
Q ss_pred CcceeecchhhhhHHHHHHHHhhh-cCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 639 FFPFIVAEEDVCSEIRMLESALEF-NRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 639 ffP~LVad~~iCsEI~~LE~~le~-~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
-.|+++|... +.+..++.+++. +......+..|.+++|.+| .+.+..+.+|++++....... ....-...
T Consensus 4 ~t~L~~A~~~--g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~~~~~g 75 (232)
T 2rfa_A 4 ESPLLLAAKE--NDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEP------MTSELYEG 75 (232)
T ss_dssp TCHHHHHHHT--TCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCC------CCSTTTTT
T ss_pred CCHHHHHHHc--CCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhcccc------ccccCCCC
Confidence 4577776544 788889999987 6665555678999999999 588888888888764211110 00111245
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCC----CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE----HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 792 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~----~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~ 792 (988)
.++||+|+..++.++++.|++..++.+..... ......+..|.||||+|++.|+.++|++||++ |+
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga--- 145 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-------GA--- 145 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-------TC---
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-------CC---
Confidence 78999999999999999999976543321100 00001123588999999999999999999999 87
Q ss_pred ccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHH----HHhhcCCCCCcccccc------ccCCCCCCCHHHHH
Q 001971 793 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL----DALTDDPGMVGIEAWK------NARDSSGSTPEDYA 862 (988)
Q Consensus 793 ~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV----~lLL~~p~~vg~gAdv------narD~~G~TPLh~A 862 (988)
++|.+|..|.||||+|+. .|+.+++ ++|+++ |+++ +.+|..|.||||+|
T Consensus 146 --------------~~~~~d~~g~t~L~~A~~-~~~~~~~~~i~~~Ll~~------g~~~~~~~~~~~~~~~g~tpl~~A 204 (232)
T 2rfa_A 146 --------------DIRAQDSLGNTVLHILIL-QPNKTFACQMYNLLLSY------DGGDHLKSLELVPNNQGLTPFKLA 204 (232)
T ss_dssp --------------CTTCCCTTSCCHHHHHHT-CSCHHHHHHHHHHHHHT------TCSCSSCCGGGCCCTTSCCHHHHH
T ss_pred --------------CCCCCCCCCCCHHHHHHH-cCChHHHHHHHHHHHhc------CCchhhhhhhccCCCCCCCHHHHH
Confidence 899999999999999999 9999988 999999 8887 68999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCC
Q 001971 863 RLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 863 ~~rGh~evveLL~~k~ak~~ 882 (988)
+..||.+++++|.+++....
T Consensus 205 ~~~g~~~~v~~Ll~~g~~~~ 224 (232)
T 2rfa_A 205 GVEGNIVMFQHLMQKRKHIA 224 (232)
T ss_dssp HHHTCHHHHHHHHHHHHHC-
T ss_pred HHcCCHHHHHHHHhcCccch
Confidence 99999999999999988654
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.87 E-value=1.5e-21 Score=196.01 Aligned_cols=192 Identities=17% Similarity=0.121 Sum_probs=162.0
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccc-cccccCCCCCCCCCccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQ-SKSRLGHLDPNTDLFPLRR 715 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~-~~~~~~~~d~~~~l~qi~R 715 (988)
+..|+++|... ..+..++.+++.++.....+..|.+++|.++ .+.+..+.||+++.. .... ....
T Consensus 25 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----------~~~~ 91 (223)
T 2f8y_A 25 GETALHLAARY--SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-----------RMHD 91 (223)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTC-----------CCTT
T ss_pred CCchHHHHHHc--CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-----------CCCC
Confidence 46788887654 6788899999988876655678899999999 588888999988763 1111 1123
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||+|+..++.++++.|++..++.+ ..+..|.||||+|+..|+.++|++||++ |+
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 149 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVN---------AVDDLGKSALHWAAAVNNVDAAVVLLKN-------GA------ 149 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTT---------CBCTTSCBHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCc---------CcCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 5789999999999999999999644321 1244588999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+||.+++++|.
T Consensus 150 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 211 (223)
T 2f8y_A 150 -----------NKDMQNNREETPLFLAAR-EGSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLLD 211 (223)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCcCHHHHHHH-cCCHHHHHHHHHc------CCCCccccccCCCHHHHHHHhcchHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 001971 876 KKINKRP 882 (988)
Q Consensus 876 ~k~ak~~ 882 (988)
++++...
T Consensus 212 ~~g~~~~ 218 (223)
T 2f8y_A 212 EYNLVRS 218 (223)
T ss_dssp HTTCSSC
T ss_pred HcCCCcc
Confidence 9988654
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.86 E-value=1.7e-21 Score=201.67 Aligned_cols=189 Identities=17% Similarity=0.126 Sum_probs=158.2
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccc-cccccCCCCCCCCCcccc
Q 001971 637 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQ-SKSRLGHLDPNTDLFPLR 714 (988)
Q Consensus 637 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~-~~~~~~~~d~~~~l~qi~ 714 (988)
.+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|+++.. .... ...
T Consensus 56 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----------~~~ 122 (253)
T 1yyh_A 56 TGETALHLAARY--SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA-----------RMH 122 (253)
T ss_dssp TSCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTC-----------CCT
T ss_pred CCCcHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-----------cCC
Confidence 347898887654 6778888999988876655678999999999 588888889988763 1111 112
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
...++||+|+..++.++++.|++..++.+ ..+..|.||||+|++.|+.++|++||++ |+
T Consensus 123 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga----- 181 (253)
T 1yyh_A 123 DGTTPLILAARLAVEGMLEDLINSHADVN---------AVDDLGKSALHWAAAVNNVDAAVVLLKN-------GA----- 181 (253)
T ss_dssp TCCCHHHHHHHHTCSSHHHHHHHTTCCTT---------CBCTTSCBHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 35789999999999999999999654321 1244588999999999999999999999 77
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 874 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL 874 (988)
++|.+|..|.||||+|+. .|+.+++++|+++ ||+++.+|..|.||||+|+.+||.+++++|
T Consensus 182 ------------~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 182 ------------NKDMQNNREETPLFLAAR-EGSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCcCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhh
Q 001971 875 QKKI 878 (988)
Q Consensus 875 ~~k~ 878 (988)
....
T Consensus 243 ~~~~ 246 (253)
T 1yyh_A 243 DLEH 246 (253)
T ss_dssp HC--
T ss_pred HHHh
Confidence 8764
No 9
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.86 E-value=2.1e-21 Score=191.86 Aligned_cols=188 Identities=18% Similarity=0.125 Sum_probs=152.8
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcC-cchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 639 FFPFIVAEEDVCSEIRMLESALEFNR-TDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 639 ffP~LVad~~iCsEI~~LE~~le~~a-~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
..|++.|... +.+..++.++..+. .....+..|.+++|.+| .+.+..+.||++++......+ ...
T Consensus 6 ~~~L~~A~~~--g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~g 72 (201)
T 3hra_A 6 VGALLEAANQ--RDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQN-----------SIS 72 (201)
T ss_dssp TTHHHHHHHT--TCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TTS
T ss_pred ccHHHHHHHh--ccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCC
Confidence 5566665543 77888888887766 33333567899999999 588889999998874322222 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc-cCccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR-LGSENKA 795 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~G-a~~~~~~ 795 (988)
.++||+|+..++.++++.|++.. ..+.. ..+..|.||||+|++.|+.++|++||++ | +
T Consensus 73 ~t~l~~A~~~~~~~~~~~Ll~~~---~~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~------ 131 (201)
T 3hra_A 73 DSPYLYAGAQGRTEILAYMLKHA---TPDLN-----KHNRYGGNALIPAAEKGHIDNVKLLLED-------GRE------ 131 (201)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHS---CCCTT-----CCCTTSCCSHHHHHHTTCHHHHHHHHHH-------CCC------
T ss_pred CCHHHHHHHcCCHHHHHHHHhcc---Ccccc-----cccCCCCcHHHHHHHcCCHHHHHHHHHc-------CCC------
Confidence 78999999999999999999632 11111 1344588999999999999999999999 5 4
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCC-----HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS-----EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 870 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~-----~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~ev 870 (988)
++|..|..|.||||+|+. .+. .+++++|+++ |++++.+|..|.||||+|+..|+.++
T Consensus 132 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~ 193 (201)
T 3hra_A 132 -----------DIDFQNDFGYTALIEAVG-LREGNQLYQDIVKLLMEN------GADQSIKDNSGRTAMDYANQKGYTEI 193 (201)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-SSCCSHHHHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred -----------CcCCCCCCCCCHHHHHHH-hccchhhHHHHHHHHHHC------CCCCCccCCCCCCHHHHHHHcCCHhH
Confidence 789999999999999999 787 8999999999 99999999999999999999999999
Q ss_pred HHHHHHhh
Q 001971 871 IHLVQKKI 878 (988)
Q Consensus 871 veLL~~k~ 878 (988)
+++|.+++
T Consensus 194 ~~~Ll~~G 201 (201)
T 3hra_A 194 SKILAQYN 201 (201)
T ss_dssp HHHHHTCC
T ss_pred HHHHHhcC
Confidence 99998764
No 10
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.86 E-value=4.9e-21 Score=193.63 Aligned_cols=196 Identities=19% Similarity=0.167 Sum_probs=158.5
Q ss_pred CCcceeecchhhhhHHHHHHHHhh----hcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALE----FNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 712 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le----~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~q 712 (988)
+..|+++|... +.+..++.+++ .+......+..|.+++|.++ .+.+..+.||++++......+
T Consensus 9 g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~---------- 76 (241)
T 1k1a_A 9 GDTPLHIAVVQ--GNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALD---------- 76 (241)
T ss_dssp TCCHHHHHHHT--TCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----------
T ss_pred CCcHHHHHHHc--CCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccC----------
Confidence 46788887654 55666666665 45544444567899999999 588888999998774322222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 001971 713 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 792 (988)
Q Consensus 713 i~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~ 792 (988)
....++||+|+..++.++++.|++......++... .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 77 -~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~--- 140 (241)
T 1k1a_A 77 -RHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEA-----RNYDGLTALHVAVNTECQETVQLLLER-------GA--- 140 (241)
T ss_dssp -TTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTC-----CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC---
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccc-----cCcCCCcHHHHHHHcCCHHHHHHHHHc-------CC---
Confidence 23578999999999999999999976533322221 245688999999999999999999999 76
Q ss_pred ccccccccccccccCCccCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 001971 793 NKALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 871 (988)
Q Consensus 793 ~~~l~~~s~~~y~fdpN~~d-~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evv 871 (988)
+++..+ ..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++
T Consensus 141 --------------~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v 199 (241)
T 1k1a_A 141 --------------DIDAVDIKSGRSPLIHAVE-NNSLSMVQLLLQH------GANVNAQMYSGSSALHSASGRGLLPLV 199 (241)
T ss_dssp --------------CTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred --------------CcccccccCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 778888 789999999999 9999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcCC
Q 001971 872 HLVQKKINKRP 882 (988)
Q Consensus 872 eLL~~k~ak~~ 882 (988)
++|.+++++..
T Consensus 200 ~~Ll~~ga~~~ 210 (241)
T 1k1a_A 200 RTLVRSGADSS 210 (241)
T ss_dssp HHHHHTTCCTT
T ss_pred HHHHhcCCCCC
Confidence 99999887643
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.86 E-value=1.9e-21 Score=201.39 Aligned_cols=195 Identities=15% Similarity=0.109 Sum_probs=139.8
Q ss_pred CCcceeecchhh-----------hhHHHHHHHHhhhcCcchhh-hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCC
Q 001971 638 TFFPFIVAEEDV-----------CSEIRMLESALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHL 704 (988)
Q Consensus 638 ~ffP~LVad~~i-----------CsEI~~LE~~le~~a~~~~~-~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~ 704 (988)
+..|+++|...- -..+..++.+++.+...... +..|.+++|.+| .+.+..+.+|++++......+
T Consensus 10 g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-- 87 (253)
T 1yyh_A 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD-- 87 (253)
T ss_dssp ------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC--
T ss_pred CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCC--
Confidence 467777765421 23667788888877765432 567899999999 588888999998874322222
Q ss_pred CCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCc
Q 001971 705 DPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLE 784 (988)
Q Consensus 705 d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~ 784 (988)
....++||+|+..++.++++.|++.... +. ...+..|.||||+|++.|+.++|++||++
T Consensus 88 ---------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~---- 146 (253)
T 1yyh_A 88 ---------NMGRTPLHAAVSADAQGVFQILIRNRAT---DL-----DARMHDGTTPLILAARLAVEGMLEDLINS---- 146 (253)
T ss_dssp ---------TTSCCHHHHHHHHTCHHHHHHHHHSTTS---CT-----TCCCTTCCCHHHHHHHHTCSSHHHHHHHT----
T ss_pred ---------CCCCCHHHHHHHcCCHHHHHHHHHcCCC---Cc-----cccCCCCCcHHHHHHHcChHHHHHHHHHc----
Confidence 2357899999999999999999985321 11 11345688999999999999999999999
Q ss_pred cccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 001971 785 VSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARL 864 (988)
Q Consensus 785 ~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~ 864 (988)
|+ ++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.
T Consensus 147 ---g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpL~~A~~ 199 (253)
T 1yyh_A 147 ---HA-----------------DVNAVDDLGKSALHWAAA-VNNVDAAVVLLKN------GANKDMQNNREETPLFLAAR 199 (253)
T ss_dssp ---TC-----------------CTTCBCTTSCBHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHH
T ss_pred ---CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHH
Confidence 77 889999999999999999 9999999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCC
Q 001971 865 RGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 865 rGh~evveLL~~k~ak~~ 882 (988)
.|+.+++++|.+++++..
T Consensus 200 ~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 200 EGSYETAKVLLDHFANRD 217 (253)
T ss_dssp HTCHHHHHHHHHTTCCTT
T ss_pred CCCHHHHHHHHHcCCCcc
Confidence 999999999999987643
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.86 E-value=2.7e-21 Score=201.39 Aligned_cols=190 Identities=11% Similarity=-0.004 Sum_probs=160.6
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... +.+..++.+++.+......+..|.+++|.+| .+.+..+.+|++++......+ ...
T Consensus 3 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g 69 (261)
T 2xai_A 3 DWSPMHEAAIH--GHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT-----------ADW 69 (261)
T ss_dssp -CCHHHHHHHH--TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TTS
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCC
Confidence 46788877654 7888899999988776655678999999999 588888999998874322222 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.++||+|+..|+.++++.|++..++.+ ....|.||||+|++.|+.++|++|+++ |+
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 125 (261)
T 2xai_A 70 HTPLFNACVSGSWDCVNLLLQHGASVQ----------PESDLASPIHEAARRGHVECVNSLIAY-------GG------- 125 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSS----------CSCTTCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC----------CCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC-------
Confidence 789999999999999999999654322 123478999999999999999999999 77
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 876 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~ 876 (988)
++|..+..|.||||+|+. .|+.+++++|+++ |++++. |..|.||||+|+..|+.+++++|.+
T Consensus 126 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~ 187 (261)
T 2xai_A 126 ----------NIDHKISHLGTPLYLACE-NQQRACVKKLLES------GADVNQ-GKGQDSPLHAVARTASEELACLLMD 187 (261)
T ss_dssp ----------CTTCCBTTTBCHHHHHHH-TTCHHHHHHHHHH------TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHH
T ss_pred ----------CCCcCCCCCCCHHHHHHH-hCCHHHHHHHHHc------CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHH
Confidence 889999999999999999 9999999999999 999996 8999999999999999999999999
Q ss_pred hhhcCC
Q 001971 877 KINKRP 882 (988)
Q Consensus 877 k~ak~~ 882 (988)
++++..
T Consensus 188 ~gad~~ 193 (261)
T 2xai_A 188 FGADTQ 193 (261)
T ss_dssp TTCCTT
T ss_pred cCCCCC
Confidence 988643
No 13
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.86 E-value=5.5e-21 Score=193.66 Aligned_cols=193 Identities=14% Similarity=0.083 Sum_probs=161.3
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccc
Q 001971 637 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 715 (988)
Q Consensus 637 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R 715 (988)
++..|+++|... +.+..++.+++.+......+..|.+++|.++ -+.+..+.||++++......+ ..
T Consensus 10 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~ 76 (237)
T 3b7b_A 10 NKRSPLHAAAEA--GHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKD-----------AE 76 (237)
T ss_dssp CSCCHHHHHHHH--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCC-----------TT
T ss_pred CCCCHHHHHHHc--CcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCC-----------CC
Confidence 346788877654 6778889999988876655678899999999 488888999998774322222 23
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||+|+..++.++++.|++... .+.. ..+..|.||||+|++.|+.+++++|+++ |+
T Consensus 77 g~t~L~~A~~~~~~~~~~~Ll~~~~---~~~~-----~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------ 135 (237)
T 3b7b_A 77 GSTCLHLAAKKGHYEVVQYLLSNGQ---MDVN-----CQDDGGWTPMIWATEYKHVDLVKLLLSK-------GS------ 135 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTTC---CCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCC---CCcc-----cCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 4789999999999999999998531 1111 1244588999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
+++..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 136 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 197 (237)
T 3b7b_A 136 -----------DINIRDNEENICLHWAAF-SGCVDIAEILLAA------KCDLHAVNIHGDSPLHIAARENRYDCVVLFL 197 (237)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HCCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHH
Confidence 789999999999999999 8999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 001971 876 KKINKR 881 (988)
Q Consensus 876 ~k~ak~ 881 (988)
+++++.
T Consensus 198 ~~gad~ 203 (237)
T 3b7b_A 198 SRDSDV 203 (237)
T ss_dssp TTTCCT
T ss_pred HcCCCC
Confidence 988764
No 14
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.86 E-value=2.2e-21 Score=195.86 Aligned_cols=189 Identities=15% Similarity=0.085 Sum_probs=111.3
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcch-hhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 639 FFPFIVAEEDVCSEIRMLESALEFNRTDA-DVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 639 ffP~LVad~~iCsEI~~LE~~le~~a~~~-~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
-.|++.|.. .+.+..++.+++...... ..+..|.+++|.+| -+.+..+.||++++......+ ...
T Consensus 7 ~~~l~~A~~--~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g 73 (231)
T 3aji_A 7 NIMICNLAY--SGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD-----------DAG 73 (231)
T ss_dssp SSHHHHHHH--HTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-----------TTS
T ss_pred cchHHHHHH--hCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcC-----------CCC
Confidence 344444333 355666666665443321 12345666777666 466666666666653222211 123
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.++||+|+..++.++++.|++..++.+. .+..|.||||+|++.|+.+++++|++. |+
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 130 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKGAHVNA---------VNQNGCTPLHYAASKNRHEIAVMLLEG-------GA------- 130 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCHHHHHHHHHHcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 5677777777777777777665432110 123456777777777777777777766 55
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 876 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~ 876 (988)
+++..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 131 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 193 (231)
T 3aji_A 131 ----------NPDAKDHYDATAMHRAAA-KGNLKMVHILLFY------KASTNIQDTEGNTPLHLACDEERVEEAKFLVT 193 (231)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHhc------CCCccccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 556666666666666666 6666666666666 66666666666666666666666666666666
Q ss_pred hhhc
Q 001971 877 KINK 880 (988)
Q Consensus 877 k~ak 880 (988)
++++
T Consensus 194 ~ga~ 197 (231)
T 3aji_A 194 QGAS 197 (231)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 6654
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.86 E-value=4.5e-21 Score=192.76 Aligned_cols=196 Identities=18% Similarity=0.103 Sum_probs=158.6
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchh-hhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 639 FFPFIVAEEDVCSEIRMLESALEFNRTDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 639 ffP~LVad~~iCsEI~~LE~~le~~a~~~~-~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
.+|++.|... +.+..++.+++.+..... .+..|.+++|.++ .+.+..+.||++++...... ...-...
T Consensus 3 ~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--------~~~~~~g 72 (228)
T 2dzn_A 3 NYPLHQACME--NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD--------DYPDDSG 72 (228)
T ss_dssp CCHHHHHHHT--TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGG--------GCCCTTS
T ss_pred ccHHHHHHHh--CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc--------ccCCCCC
Confidence 4577766544 778888888887765543 4567899999999 58888899998887321111 1112245
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.++||+|+..++.++++.|++......++ ..+..|.||||+|++.|+.+++++|+++ |+
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 131 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLKPDLN-------KITNQGVTCLHLAVGKKWFEVSQFLIEN-------GA------- 131 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSCCCTT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCcccc-------cCCcCCCCHHHHHHHcCCHhHHHHHHHc-------CC-------
Confidence 78999999999999999999864221111 1244588999999999999999999999 77
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccc-cccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIE-AWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~g-AdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|.+|..|.||||+|+. .|+.+++++|+++ + ++++.+|..|.||||+|+..|+.+++++|.
T Consensus 132 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 132 ----------SVRIKDKFNQIPLHRAAS-VGSLKLIELLCGL------GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp ----------CSCCCCTTSCCHHHHHHH-TTCHHHHHHHHTT------TCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ----------CccccCCCCCCHHHHHHH-cCCHHHHHHHHhc------CcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 7 999999999999999999999999999999
Q ss_pred -HhhhcCC
Q 001971 876 -KKINKRP 882 (988)
Q Consensus 876 -~k~ak~~ 882 (988)
+++++..
T Consensus 195 ~~~ga~~~ 202 (228)
T 2dzn_A 195 EKYGAEYD 202 (228)
T ss_dssp HHHCCCSC
T ss_pred HhcCCCCC
Confidence 7777643
No 16
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.86 E-value=7.8e-21 Score=191.81 Aligned_cols=191 Identities=14% Similarity=0.106 Sum_probs=160.3
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccc
Q 001971 637 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 715 (988)
Q Consensus 637 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R 715 (988)
.+..|+++|... +.+..++.+++.+......+..|.+++|.++ .+.+..+.||++++......+ ..
T Consensus 39 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~ 105 (231)
T 3aji_A 39 DSRTALHWACSA--GHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVN-----------QN 105 (231)
T ss_dssp TSCCHHHHHHHH--TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TT
T ss_pred CCCCHHHHHHHc--CcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCC-----------CC
Confidence 347788887654 6788888899888766655678899999999 578888889988774322222 23
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||+|+..++.++++.|++..++.+ ..+..|.||||+|++.|+.++|++|+++ |+
T Consensus 106 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 163 (231)
T 3aji_A 106 GCTPLHYAASKNRHEIAVMLLEGGANPD---------AKDHYDATAMHRAAAKGNLKMVHILLFY-------KA------ 163 (231)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCcHHHHHHHcCCHHHHHHHHhc-------CC------
Confidence 5789999999999999999998644321 1244588999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|.+|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..++.+++++|.
T Consensus 164 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~ 225 (231)
T 3aji_A 164 -----------STNIQDTEGNTPLHLACD-EERVEEAKFLVTQ------GASIYIENKEEKTPLQVAKGGLGLILKRLAE 225 (231)
T ss_dssp -----------CSCCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHSCHHHHHHHHHHHH
T ss_pred -----------CccccCCCCCCHHHHHHH-CCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHhhHHHHHHHHHc
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hhhhc
Q 001971 876 KKINK 880 (988)
Q Consensus 876 ~k~ak 880 (988)
++++.
T Consensus 226 ~~~a~ 230 (231)
T 3aji_A 226 GEEAS 230 (231)
T ss_dssp HHHHC
T ss_pred ccccc
Confidence 98764
No 17
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.86 E-value=5.4e-21 Score=184.78 Aligned_cols=160 Identities=18% Similarity=0.097 Sum_probs=136.6
Q ss_pred cCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCC
Q 001971 672 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 672 ~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
.|.+++|.+| .+.+..+.++++.+......+ ....++||+|+..++.++++.|++..++.+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------ 64 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTD-----------EEGFTPLMWAAAHGQIAVVEFLLQNGADPQL------ 64 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCC-----------CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC------
Confidence 3678899988 588888888888764322222 2357899999999999999999996443211
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
.+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.+
T Consensus 65 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~ 116 (167)
T 3v31_A 65 ---LGKGRESALSLACSKGYTDIVKMLLDC-------GV-----------------DVNEYDWNGGTPLLYAVH-GNHVK 116 (167)
T ss_dssp ---CCTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHH
T ss_pred ---cCCCCCcHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCcCCCCCCCHHHHHHH-cCCHH
Confidence 244588999999999999999999999 77 889999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 831 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++.+..
T Consensus 117 ~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (167)
T 3v31_A 117 CVKMLLES------GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162 (167)
T ss_dssp HHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999999999999999999999987654
No 18
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=7.6e-21 Score=184.61 Aligned_cols=158 Identities=19% Similarity=0.130 Sum_probs=135.1
Q ss_pred CcccHHHH-HHHHHHHhHhhccccc-ccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCc
Q 001971 674 KIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 751 (988)
Q Consensus 674 ~~~lh~~a-m~fL~EIGWLLqr~~~-~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~ 751 (988)
.+++|.+| .+.+..+.+++.+... ....+ ....++||+|+..++.++|+.|++..++.+.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------- 64 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPD-----------ERGFTPLIWASAFGEIETVRFLLEWGADPHI------- 64 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC-------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCCCchh-------
Confidence 56788888 5888889999887642 11111 2357899999999999999999997543221
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHH
Q 001971 752 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 831 (988)
Q Consensus 752 l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eV 831 (988)
.+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 65 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 117 (172)
T 3v30_A 65 --LAKERESALSLASTGGYTDIVGLLLER-------DV-----------------DINIYDWNGGTPLLYAVR-GNHVKC 117 (172)
T ss_dssp --CCTTCCCHHHHHHHTTCHHHHHHHHTT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred --hcccCCCHHHHHHHCCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHH
Confidence 234588999999999999999999999 77 789999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 832 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 832 V~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
|++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 118 v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~ 162 (172)
T 3v30_A 118 VEALLAR------GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162 (172)
T ss_dssp HHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHc------CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 9999999 99999999999999999999999999999999988755
No 19
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.85 E-value=4e-21 Score=208.38 Aligned_cols=131 Identities=16% Similarity=0.097 Sum_probs=109.5
Q ss_pred ccchHHHHHHHcC--chHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 001971 715 RFKWLIEFSMDHE--WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 792 (988)
Q Consensus 715 R~k~lL~~Ave~g--~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~ 792 (988)
...++||+|+..| +.++|+.||+..++.+. .+..|.||||+|++.|+.++|++||++ |++
T Consensus 137 ~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~---------~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~~-- 198 (364)
T 3ljn_A 137 KGQTALHWCVGLGPEYLEMIKILVQLGASPTA---------KDKADETPLMRAMEFRNREALDLMMDT-------VPS-- 198 (364)
T ss_dssp SCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHH-------CSC--
T ss_pred CCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc---------cCCCCCCHHHHHHHcCCHHHHHHHHhc-------ccc--
Confidence 3567888888888 88888888886443211 244578999999999999999999988 541
Q ss_pred ccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHH
Q 001971 793 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 872 (988)
Q Consensus 793 ~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evve 872 (988)
....++|..|..|.||||+||. .|+.++|++|+++ ||+++.+|..|.||||+|+..||.++++
T Consensus 199 ----------~~~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~g~~~~v~ 261 (364)
T 3ljn_A 199 ----------KSSLRLDYANKQGNSHLHWAIL-INWEDVAMRFVEM------GIDVNMEDNEHTVPLYLSVRAAMVLLTK 261 (364)
T ss_dssp ----------SSSCCTTCCCTTCCCTTHHHHT-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTCCHHHHH
T ss_pred ----------cccccccccCCCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHhChHHHHH
Confidence 0111489999999999999999 9999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhc
Q 001971 873 LVQKKINK 880 (988)
Q Consensus 873 LL~~k~ak 880 (988)
+|.+++++
T Consensus 262 ~Ll~~~~~ 269 (364)
T 3ljn_A 262 ELLQKTDV 269 (364)
T ss_dssp HHHHHSCH
T ss_pred HHHHcCCc
Confidence 99998764
No 20
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.85 E-value=1.4e-20 Score=199.56 Aligned_cols=201 Identities=20% Similarity=0.189 Sum_probs=165.0
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... +.+..++.+++.++.....+..|.+++|.+| .+.+..+.||++++......+ ...
T Consensus 58 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~-----------~~g 124 (351)
T 3utm_A 58 KSTPLHLAAGY--NRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD-----------LWQ 124 (351)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCC-----------CCC
Confidence 47899887755 7788899999998877666678999999999 588889999998874322222 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhcccccc-CCCCC--------------------------------------------c
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVS-LGEHP--------------------------------------------S 751 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd-~g~~~--------------------------------------------~ 751 (988)
.++||+|+..++.++++.|++..++.+.. ..... .
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 204 (351)
T 3utm_A 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN 204 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc
Confidence 78999999999999999999976654321 10000 0
Q ss_pred hhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCC
Q 001971 752 LDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 828 (988)
Q Consensus 752 l~~~l~G~TpLH~AVr~---g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~ 828 (988)
......|.||||+|+.. +..+++++|++. |+ ++|.++..|.||||+|+. .|+
T Consensus 205 ~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~g~ 259 (351)
T 3utm_A 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRK-------GA-----------------NVNEKNKDFMTPLHVAAE-RAH 259 (351)
T ss_dssp CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTC
T ss_pred ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc-------CC-----------------CcCCcCCCCCCHHHHHHH-cCC
Confidence 01234578999999999 558999999999 77 889999999999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 829 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 829 ~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
.++|++|+++ |+++|.+|..|.||||+|+..||.+++++|.+++++..
T Consensus 260 ~~~v~~Ll~~------ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 307 (351)
T 3utm_A 260 NDVMEVLHKH------GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPS 307 (351)
T ss_dssp HHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 9999999999 99999999999999999999999999999999988643
No 21
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.85 E-value=1e-21 Score=200.23 Aligned_cols=198 Identities=13% Similarity=-0.013 Sum_probs=152.1
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcC----cchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNR----TDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFP 712 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a----~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~q 712 (988)
+..|+++|... +.+..++.+++.+. .....+..|.+++|.+| .+.+..+.+|++++......+
T Consensus 8 g~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~---------- 75 (236)
T 1ikn_D 8 GDSFLHLAIIH--EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRD---------- 75 (236)
T ss_dssp CCCTTHHHHHT--TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCC----------
T ss_pred CCchhHHHHHc--CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC----------
Confidence 35666665533 33333444444333 22223456899999999 588888999998774322222
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 001971 713 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 792 (988)
Q Consensus 713 i~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~ 792 (988)
....++||+|+..++.++++.|++...+.... . .....+..|.||||+|++.|+.++|++||++ |+
T Consensus 76 -~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~--- 141 (236)
T 1ikn_D 76 -FRGNTPLHLACEQGCLASVGVLTQSCTTPHLH--S-ILKATNYNGHTCLHLASIHGYLGIVELLVSL-------GA--- 141 (236)
T ss_dssp -TTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS--C-GGGCCCTTCCCHHHHHHHTTCHHHHHHHHHH-------TC---
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHhcccchhHH--H-HhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC---
Confidence 23578999999999999999999965432110 0 0111344588999999999999999999999 77
Q ss_pred ccccccccccccccCCccCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 001971 793 NKALVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 871 (988)
Q Consensus 793 ~~~l~~~s~~~y~fdpN~~d~-~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evv 871 (988)
++|..+. .|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+.+|+.+++
T Consensus 142 --------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~ 200 (236)
T 1ikn_D 142 --------------DVNAQEPCNGRTALHLAVD-LQNPDLVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQ 200 (236)
T ss_dssp --------------CTTCCCTTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHH
T ss_pred --------------CCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCcccCCCCCHHHHHHccCchHHH
Confidence 8898987 99999999999 9999999999999 999999999999999999999999999
Q ss_pred HHHHHhhhcCC
Q 001971 872 HLVQKKINKRP 882 (988)
Q Consensus 872 eLL~~k~ak~~ 882 (988)
++|.+++++..
T Consensus 201 ~~Ll~~ga~~~ 211 (236)
T 1ikn_D 201 QQLGQLTLENL 211 (236)
T ss_dssp HHHHTTSCGGG
T ss_pred HHHHHcchhhh
Confidence 99999988643
No 22
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.85 E-value=6.6e-21 Score=182.50 Aligned_cols=156 Identities=19% Similarity=0.195 Sum_probs=130.3
Q ss_pred CCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCc
Q 001971 673 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 751 (988)
Q Consensus 673 g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~ 751 (988)
..+++|.+| .+.+..+.+|++++......+ ...+++||+|+. ++.++++.|++..++.+.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-----------~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~------- 65 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQN-----------GFGRTALQVMKL-GNPEIARRLLLRGANPDL------- 65 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCC-----------TTSCCHHHHCCS-SCHHHHHHHHHTTCCTTC-------
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccC-----------ccCccHHHHHHc-CcHHHHHHHHHcCCCCCC-------
Confidence 346778888 588888999988763222211 235789999999 999999999996443211
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHH
Q 001971 752 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 831 (988)
Q Consensus 752 l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eV 831 (988)
.+..|.||||+|++.|+.++|++|+++ |+ ++|.+|..|.||||+|+. .|+.++
T Consensus 66 --~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 118 (162)
T 1ihb_A 66 --KDRTGFAVIHDAARAGFLDTLQTLLEF-------QA-----------------DVNIEDNEGNLPLHLAAK-EGHLRV 118 (162)
T ss_dssp --CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred --CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHH
Confidence 244688999999999999999999999 77 889999999999999999 999999
Q ss_pred HHHhhcCCCCCccccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 001971 832 LDALTDDPGMVGIEAW-KNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 880 (988)
Q Consensus 832 V~lLL~~p~~vg~gAd-vnarD~~G~TPLh~A~~rGh~evveLL~~k~ak 880 (988)
+++|+++ +++ ++.+|..|.||||+|+..|+.+++++|.+++++
T Consensus 119 v~~Ll~~------g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 119 VEFLVKH------TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHH------SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHc------cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999 887 699999999999999999999999999999874
No 23
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.85 E-value=7.4e-21 Score=188.26 Aligned_cols=158 Identities=16% Similarity=0.139 Sum_probs=134.9
Q ss_pred hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCC
Q 001971 670 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 748 (988)
Q Consensus 670 ~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~ 748 (988)
+..|.+++|.+| .+.+..+.+|++++......+ ....++||+|+..++.++++.|++..++.+
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----- 95 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKD-----------IEGSTALIWAVKNNRLGIAEKLLSKGSNVN----- 95 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHTCCTT-----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcccccccc-----------ccCccHHHHHHHcCCHHHHHHHHHCCCCCC-----
Confidence 346899999999 577778888888763211111 235789999999999999999999654321
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCC
Q 001971 749 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 828 (988)
Q Consensus 749 ~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~ 828 (988)
..+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+
T Consensus 96 ----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~ 146 (192)
T 2rfm_A 96 ----TKDFSGKTPLMWSIIFGYSEMSYFLLEH-------GA-----------------NVNDRNLEGETPLIVASK-YGR 146 (192)
T ss_dssp ----CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CSSCCCTTCCCHHHHHHH-HTC
T ss_pred ----CCCCCCCcHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCCCCCCCCCHHHHHHH-cCC
Confidence 1244588999999999999999999999 77 889999999999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 001971 829 EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 878 (988)
Q Consensus 829 ~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ 878 (988)
.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+.+
T Consensus 147 ~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 147 SEIVKKLLEL------GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp HHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 9999999999 9999999999999999999999999999998875
No 24
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.84 E-value=2.7e-21 Score=199.45 Aligned_cols=195 Identities=14% Similarity=0.039 Sum_probs=140.6
Q ss_pred HHHHhhhcCcchhhh----hcCCcccHHHHH----HHHHHHhHhhcccccccccCC-CCCCCCCccccccchHHHHHHHc
Q 001971 656 LESALEFNRTDADVE----RFGKIDTKNQAM----DFIHEIGWLFHRSQSKSRLGH-LDPNTDLFPLRRFKWLIEFSMDH 726 (988)
Q Consensus 656 LE~~le~~a~~~~~~----~~g~~~lh~~am----~fL~EIGWLLqr~~~~~~~~~-~d~~~~l~qi~R~k~lL~~Ave~ 726 (988)
|+.+++.+......+ ..|.+++|.+++ +.+..+.+|+..+........ .+.... ..-....++||+|+..
T Consensus 25 l~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~-~~d~~g~t~L~~A~~~ 103 (260)
T 3jxi_A 25 LSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFR-DVYYRGQTALHIAIER 103 (260)
T ss_dssp HHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBC-CSSEESBCHHHHHHHT
T ss_pred HHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccccc-ccccCCCCHHHHHHHc
Confidence 444444665544333 558999998883 555566666665421000000 000000 1112568899999999
Q ss_pred CchHHHHHHhhhhccccccCC-CC----CchhhccCCCcHHHHHHHcCCHHHHHHHhc---cCCCccccccCcccccccc
Q 001971 727 EWCAVVKKLLHILLDGTVSLG-EH----PSLDLALTELGLLHRAVRKNSRPLVDLLLR---FVPLEVSDRLGSENKALVD 798 (988)
Q Consensus 727 g~~aVVk~LL~~l~dg~vd~g-~~----~~l~~~l~G~TpLH~AVr~g~~eiVelLL~---~~p~~~~~Ga~~~~~~l~~ 798 (988)
|+.++|++||+..++.+.... .. .....+..|.||||+|+..|+.++|++||+ + |+
T Consensus 104 g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-------ga--------- 167 (260)
T 3jxi_A 104 RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK-------QA--------- 167 (260)
T ss_dssp TCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC-------CC---------
T ss_pred CCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc-------CC---------
Confidence 999999999997654332100 00 000011458899999999999999999999 6 77
Q ss_pred ccccccccCCccCCCCCChHHHHHHhhCCC---------HHHHHHhhcCCCCCcccccc-------ccCCCCCCCHHHHH
Q 001971 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGS---------EDVLDALTDDPGMVGIEAWK-------NARDSSGSTPEDYA 862 (988)
Q Consensus 799 ~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~---------~eVV~lLL~~p~~vg~gAdv-------narD~~G~TPLh~A 862 (988)
++|.+|..|+||||+|+. .|+ .+++++|+++ ||++ +.+|..|.||||+|
T Consensus 168 --------~~~~~d~~g~TpLh~A~~-~~~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 168 --------DLRRQDSRGNTVLHALVA-IADNTRENTKFVTKMYDLLLIK------CAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp --------CTTCCCTTSCCHHHHHHH-HCCSSHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred --------CCcccCCCCCcHHHHHHH-hccCchhHHHHHHHHHHHHHHh------CcccccccchhhcccCCCCCHHHHH
Confidence 899999999999999998 666 6999999999 9999 78999999999999
Q ss_pred HHcCCHHHHHHHHHhhhcCC
Q 001971 863 RLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 863 ~~rGh~evveLL~~k~ak~~ 882 (988)
+..||.+++++|.+++.+..
T Consensus 233 ~~~g~~~~v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 233 AKTGKIGIFQHIIRREIADA 252 (260)
T ss_dssp HHTTCHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhCCCcc
Confidence 99999999999999988654
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.84 E-value=1.1e-20 Score=200.49 Aligned_cols=200 Identities=16% Similarity=0.094 Sum_probs=137.8
Q ss_pred cceeecchhhhhHHHHHHHHhhhcCcch--------hhhhcCCcccHHHH-HHHH-HHHhHhhcccccccccCCCCCCCC
Q 001971 640 FPFIVAEEDVCSEIRMLESALEFNRTDA--------DVERFGKIDTKNQA-MDFI-HEIGWLFHRSQSKSRLGHLDPNTD 709 (988)
Q Consensus 640 fP~LVad~~iCsEI~~LE~~le~~a~~~--------~~~~~g~~~lh~~a-m~fL-~EIGWLLqr~~~~~~~~~~d~~~~ 709 (988)
-|++.|.. .+.+..++.+++.++.+. ..+..+.++++.++ .+.. ..+..|+.++......+
T Consensus 13 ~~L~~A~~--~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d------- 83 (269)
T 4b93_B 13 EKLLRAVA--DGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTS------- 83 (269)
T ss_dssp HHHHHHHH--TTCHHHHHHHHTCC----------------------------------------CCCCTTCCC-------
T ss_pred hHHHHHHH--cCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcC-------
Confidence 45555443 377888888888776432 11335677888777 3333 34566666654222221
Q ss_pred CccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcccccc
Q 001971 710 LFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRL 789 (988)
Q Consensus 710 l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga 789 (988)
..+.+|||+|+..|+.++|++||+..++.. ..+..|.||||+|+..++.+++++||++ |+
T Consensus 84 ----~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~---------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-------g~ 143 (269)
T 4b93_B 84 ----QDGSSPLHVAALHGRADLIPLLLKHGANAG---------ARNADQAVPLHLACQQGHFQVVKCLLDS-------NA 143 (269)
T ss_dssp ----TTSCCHHHHHHHTTCTTHHHHHHHTTCCTT---------CCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TC
T ss_pred ----CCCCCHHHHHHHcCcHHHHHHHHhcCCCcC---------ccCCCCCCccccccccChHHHHHHHHHC-------CC
Confidence 235789999999999999999998654321 1244688999999999999999999999 77
Q ss_pred CccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHH
Q 001971 790 GSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYS 869 (988)
Q Consensus 790 ~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~e 869 (988)
++|.+|..|+||||+|+. .|+.++|++|+++ ||++|.+|..|.||||+|+..|+.+
T Consensus 144 -----------------~~n~~d~~g~TpL~~A~~-~g~~~~v~~Ll~~------gadvn~~~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 144 -----------------KPNKKDLSGNTPLIYACS-GGHHELVALLLQH------GASINASNNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp -----------------CSCCCCTTCCCHHHHHHH-TTCGGGHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred -----------------CCCCCCCCCCCHHHHHHH-CCCHHHHHHHHHC------CCCCCccccCCCcHHHHHHHcCCHH
Confidence 899999999999999999 9999999999999 9999999999999999999999999
Q ss_pred HHHHHHHhhhcCCC---CCceeeeeC
Q 001971 870 YIHLVQKKINKRPN---GGHVVVDIC 892 (988)
Q Consensus 870 vveLL~~k~ak~~~---~~~v~v~ip 892 (988)
++++|.+++++... .+...+.++
T Consensus 200 ~v~~Ll~~Gad~~~~d~~G~TpL~~A 225 (269)
T 4b93_B 200 VVELLLLHGASVQVLNKRQRTAVDCA 225 (269)
T ss_dssp HHHHHHHTTCCSCCCCTTSCCSGGGS
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 99999999886432 334444444
No 26
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.84 E-value=6e-21 Score=196.79 Aligned_cols=196 Identities=15% Similarity=0.036 Sum_probs=143.8
Q ss_pred HHHHHhhhcCcchh----hhhcCCcccHHHHH----HHHHHHhHhhcccccccccCC-CCCCCCCccccccchHHHHHHH
Q 001971 655 MLESALEFNRTDAD----VERFGKIDTKNQAM----DFIHEIGWLFHRSQSKSRLGH-LDPNTDLFPLRRFKWLIEFSMD 725 (988)
Q Consensus 655 ~LE~~le~~a~~~~----~~~~g~~~lh~~am----~fL~EIGWLLqr~~~~~~~~~-~d~~~~l~qi~R~k~lL~~Ave 725 (988)
.|+.+++.+..... .+..|.+++|.+|. +.+..+.+|++++........ .+... ...-....++||+|+.
T Consensus 21 ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~-~~~d~~g~t~L~~A~~ 99 (256)
T 2etb_A 21 LLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQC-TDEFYQGHSALHIAIE 99 (256)
T ss_dssp HHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCC-CSTTTTTCCHHHHHHH
T ss_pred HHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccccc-ccccccCCCHHHHHHH
Confidence 45666666665544 45678999999984 566666666665532111100 00000 0011246889999999
Q ss_pred cCchHHHHHHhhhhccccccCCC-C---CchhhccCCCcHHHHHHHcCCHHHHHHHhc---cCCCccccccCcccccccc
Q 001971 726 HEWCAVVKKLLHILLDGTVSLGE-H---PSLDLALTELGLLHRAVRKNSRPLVDLLLR---FVPLEVSDRLGSENKALVD 798 (988)
Q Consensus 726 ~g~~aVVk~LL~~l~dg~vd~g~-~---~~l~~~l~G~TpLH~AVr~g~~eiVelLL~---~~p~~~~~Ga~~~~~~l~~ 798 (988)
.|+.++|+.||+..++.+..... . .....+..|.||||+|++.|+.++|++||+ + |+
T Consensus 100 ~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~-------ga--------- 163 (256)
T 2etb_A 100 KRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ-------PA--------- 163 (256)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC-------CC---------
T ss_pred cCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc-------CC---------
Confidence 99999999999976543221000 0 000001138899999999999999999999 6 77
Q ss_pred ccccccccCCccCCCCCChHHHHHHhh-CCCHH-------HHHHhhcCCCCCcccccc-------ccCCCCCCCHHHHHH
Q 001971 799 GVHKGFLFRPDVIGPAGLTPIHIAAGK-DGSED-------VLDALTDDPGMVGIEAWK-------NARDSSGSTPEDYAR 863 (988)
Q Consensus 799 ~s~~~y~fdpN~~d~~G~TPLHiAA~~-~G~~e-------VV~lLL~~p~~vg~gAdv-------narD~~G~TPLh~A~ 863 (988)
++|.+|..|+||||+|+.. .++.+ +|++|+++ ||++ +.+|..|.||||+|+
T Consensus 164 --------~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~------ga~~~~~~~~~~~~d~~g~tpL~~A~ 229 (256)
T 2etb_A 164 --------SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM------GARLCPTVQLEEISNHQGLTPLKLAA 229 (256)
T ss_dssp --------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHSTTCCGGGCCCTTSCCHHHHHH
T ss_pred --------CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc------CCCcccccccccccCCCCCCHHHHHH
Confidence 8999999999999999973 57777 99999999 9999 999999999999999
Q ss_pred HcCCHHHHHHHHHhhhcC
Q 001971 864 LRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 864 ~rGh~evveLL~~k~ak~ 881 (988)
..||.+++++|.+++.+.
T Consensus 230 ~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 230 KEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHhCCCCC
Confidence 999999999999998753
No 27
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.84 E-value=8.9e-21 Score=190.39 Aligned_cols=174 Identities=15% Similarity=0.093 Sum_probs=143.2
Q ss_pred HhhhcCcchhh-hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHh
Q 001971 659 ALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLL 736 (988)
Q Consensus 659 ~le~~a~~~~~-~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL 736 (988)
+++.+...... +..|.+++|.+| .+.+..+.||++++......+ ....++||+|+..++.++++.|+
T Consensus 10 Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 10 FIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQD-----------NMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp TEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcC-----------CCCCCHHHHHHHcCCHHHHHHHH
Confidence 44444443322 467899999999 588888999998774322221 23578999999999999999999
Q ss_pred hhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCC
Q 001971 737 HILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGL 816 (988)
Q Consensus 737 ~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~ 816 (988)
+.... +. ...+..|.||||+|++.++.++|++|+++ |+ ++|..+..|.
T Consensus 79 ~~~~~---~~-----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~ 126 (223)
T 2f8y_A 79 RNRAT---DL-----DARMHDGTTPLILAARLAVEGMLEDLINS-------HA-----------------DVNAVDDLGK 126 (223)
T ss_dssp HBTTS---CT-----TCCCTTCCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCBCTTSC
T ss_pred HcCCC---Cc-----ccCCCCCCcHHHHHHHhCcHHHHHHHHHc-------CC-----------------CCcCcCCCCC
Confidence 85321 11 11245688999999999999999999999 77 7899999999
Q ss_pred hHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 817 TPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 817 TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 127 t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 185 (223)
T 2f8y_A 127 SALHWAAA-VNNVDAAVVLLKN------GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 185 (223)
T ss_dssp BHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 99999999 9999999999999 99999999999999999999999999999999987643
No 28
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.84 E-value=3.4e-20 Score=190.34 Aligned_cols=202 Identities=17% Similarity=0.137 Sum_probs=160.8
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||++++........... .........
T Consensus 72 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~-~~~~~~~~g 148 (285)
T 1wdy_A 72 GATPFLLAAIA--GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-DQERLRKGG 148 (285)
T ss_dssp CCCHHHHHHHH--TCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCH-HHHHTTCCC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHH-HHHhhccCC
Confidence 46788876644 6677888888888776655667899999998 4778888888887743222211000 000002235
Q ss_pred chHHHHHHHcCchHHHHHHhhh-hccccccCCCCCchhhccCCCcHHHHHHHcCC----HHHHHHHhccCCCccccccCc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHI-LLDGTVSLGEHPSLDLALTELGLLHRAVRKNS----RPLVDLLLRFVPLEVSDRLGS 791 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~-l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~----~eiVelLL~~~p~~~~~Ga~~ 791 (988)
.++||+|+..++.++++.|++. .++ .. ..+..|.||||+|+..++ .+++++|+++ |+
T Consensus 149 ~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~-----~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~-------g~-- 210 (285)
T 1wdy_A 149 ATALMDAAEKGHVEVLKILLDEMGAD----VN-----ACDNMGRNALIHALLSSDDSDVEAITHLLLDH-------GA-- 210 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTSCCC----TT-----CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT-------TC--
T ss_pred CcHHHHHHHcCCHHHHHHHHHhcCCC----CC-----ccCCCCCCHHHHHHHccccchHHHHHHHHHHc-------CC--
Confidence 6899999999999999999984 322 11 124458899999999999 9999999999 77
Q ss_pred cccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhc-CCCCCccccccccCCCCCCCHHHHHHHcCCHHH
Q 001971 792 ENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD-DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSY 870 (988)
Q Consensus 792 ~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~-~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~ev 870 (988)
++|.++..|.||||+|+. .|+.++|++|++ . +++++.+|..|.||||+|+..|+.++
T Consensus 211 ---------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~------g~~~~~~~~~g~t~l~~A~~~~~~~i 268 (285)
T 1wdy_A 211 ---------------DVNVRGERGKTPLILAVE-KKHLGLVQRLLEQE------HIEINDTDSDGKTALLLAVELKLKKI 268 (285)
T ss_dssp ---------------CSSCCCTTSCCHHHHHHH-TTCHHHHHHHHHSS------SCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ---------------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHhcc------CCCccccCCCCCcHHHHHHHcCcHHH
Confidence 889999999999999999 999999999999 6 99999999999999999999999999
Q ss_pred HHHHHHhhhcCC
Q 001971 871 IHLVQKKINKRP 882 (988)
Q Consensus 871 veLL~~k~ak~~ 882 (988)
+++|.+++++..
T Consensus 269 ~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 269 AELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHSSCSC
T ss_pred HHHHHHcCCCCC
Confidence 999999998865
No 29
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.84 E-value=2.9e-20 Score=181.07 Aligned_cols=155 Identities=19% Similarity=0.114 Sum_probs=130.3
Q ss_pred CCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCc
Q 001971 673 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 751 (988)
Q Consensus 673 g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~ 751 (988)
+.+.++.+| .+.+..+.||+.++......+ ....++||+|+..++.++++.|++..++.+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------- 74 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVNAED-----------ASGWTPLHLAAFNGHLEIVEVLLKNGADVN-------- 74 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT--------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC--------
Confidence 455777777 588888888888764222221 235789999999999999999999643311
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHH
Q 001971 752 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 831 (988)
Q Consensus 752 l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eV 831 (988)
..+..|.||||+|+..|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.++
T Consensus 75 -~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~ 128 (169)
T 2y1l_E 75 -AVDHAGMTPLRLAALFGHLEIVEVLLKN-------GA-----------------DVNANDMEGHTPLHLAAM-FGHLEI 128 (169)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHH
T ss_pred -ccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHH
Confidence 1244588999999999999999999999 77 789999999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 001971 832 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 878 (988)
Q Consensus 832 V~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ 878 (988)
+++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++
T Consensus 129 v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 129 VEVLLKN------GADVNAQDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999 9999999999999999999999999999998764
No 30
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=2.6e-20 Score=197.43 Aligned_cols=192 Identities=11% Similarity=-0.004 Sum_probs=161.4
Q ss_pred CCCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccc
Q 001971 636 SSTFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLR 714 (988)
Q Consensus 636 ss~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~ 714 (988)
.++..|+++|... +.+..++.+++.+......+..|.+++|.+| .+.+..+.||++++......+ .
T Consensus 57 ~~g~t~L~~Aa~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-----------~ 123 (285)
T 3d9h_A 57 VSDWSPMHEAAIH--GHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT-----------A 123 (285)
T ss_dssp CCSCCHHHHHHHT--TCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCC-----------T
T ss_pred ccCCCHHHHHHHc--CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCC-----------C
Confidence 3457898887654 6788899999988766555678999999999 488888999998864322222 2
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
...++||+|+..++.++|+.|++..++.. ....|.||||+|++.|+.++|++||++ |+
T Consensus 124 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~----- 181 (285)
T 3d9h_A 124 DWHTPLFNACVSGSWDCVNLLLQHGASVQ----------PESDLASPIHEAARRGHVECVNSLIAY-------GG----- 181 (285)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCSS----------CSCTTSCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCCHHHHHHHcCHHHHHHHHHHCCCCCC----------CCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----
Confidence 35789999999999999999999654321 122378999999999999999999999 77
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 874 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL 874 (988)
++|..|..|.||||+|+. .|+.++|++|+++ |++++. |..|.||||+|+..|+.+++++|
T Consensus 182 ------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~-~~~g~t~L~~A~~~~~~~~v~~L 241 (285)
T 3d9h_A 182 ------------NIDHKISHLGTPLYLACE-NQQRACVKKLLES------GADVNQ-GKGQDSPLHAVVRTASEELACLL 241 (285)
T ss_dssp ------------CTTCCBTTTBCHHHHHHH-TTCHHHHHHHHHT------TCCTTC-CBTTBCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCcCCCCCCHHHHHHH-cCcHHHHHHHHHC------CCCCCC-CCCCCCHHHHHHHcCCHHHHHHH
Confidence 789999999999999999 9999999999999 999995 99999999999999999999999
Q ss_pred HHhhhcCC
Q 001971 875 QKKINKRP 882 (988)
Q Consensus 875 ~~k~ak~~ 882 (988)
.+++++..
T Consensus 242 l~~gad~~ 249 (285)
T 3d9h_A 242 MDFGADTQ 249 (285)
T ss_dssp HHTTCCTT
T ss_pred HHCCCCCC
Confidence 99987643
No 31
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.84 E-value=3e-21 Score=195.24 Aligned_cols=194 Identities=17% Similarity=0.094 Sum_probs=154.5
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+....+.||+.+.... ..+. ...-...
T Consensus 46 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~----~~~~---~~~~~~g 116 (241)
T 1k1a_A 46 RQTPLHLAVIT--TLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPG----TLDL---EARNYDG 116 (241)
T ss_dssp SCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTT----SCCT---TCCCTTS
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc----cccc---cccCcCC
Confidence 46788887654 6777888999988876655678899999999 47788888888876310 0010 0112245
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.++||+|+..++.++++.|++..++.+. .....|.||||+|++.|+.++|++||++ |+
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~--------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 174 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGADIDA--------VDIKSGRSPLIHAVENNSLSMVQLLLQH-------GA------- 174 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC--------CCTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCccc--------ccccCCCcHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 7899999999999999999996543211 1124588999999999999999999999 77
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 876 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~ 876 (988)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+|+.++++.|..
T Consensus 175 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 175 ----------NVNAQMYSGSSALHSASG-RGLLPLVRTLVRS------GADSSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp ----------CTTCBCTTSCBHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred ----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHhc------CCCCCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 889999999999999999 9999999999999 99999999999999999999999999998887
Q ss_pred hhh
Q 001971 877 KIN 879 (988)
Q Consensus 877 k~a 879 (988)
+.+
T Consensus 238 ~~a 240 (241)
T 1k1a_A 238 RPA 240 (241)
T ss_dssp ---
T ss_pred CCC
Confidence 653
No 32
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.84 E-value=1e-20 Score=208.25 Aligned_cols=204 Identities=16% Similarity=0.121 Sum_probs=161.6
Q ss_pred CCCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccc
Q 001971 637 STFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRR 715 (988)
Q Consensus 637 s~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R 715 (988)
.+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||+.+......... .-..
T Consensus 165 ~g~TpL~~A~~~--g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--------~d~~ 234 (373)
T 2fo1_E 165 DENTPLMLAVLA--RRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE--------LDRN 234 (373)
T ss_dssp TSCCHHHHHHHH--TCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSC--------CCTT
T ss_pred CCCCHHHHHHHc--ChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhh--------cCCC
Confidence 347898887654 6778889999998876656678999999999 5888889999887621011111 1123
Q ss_pred cchHHHHHHHcC---chHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcc
Q 001971 716 FKWLIEFSMDHE---WCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSE 792 (988)
Q Consensus 716 ~k~lL~~Ave~g---~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~ 792 (988)
..++||+|+..+ +.++++.|++..++.+..... .....+..|.||||+|++.|+.++|++||++. |+
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~-~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~------~~--- 304 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA-RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK------GS--- 304 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGG-GTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS------CC---
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccc-ccCcccccCCCHHHHHHHhCCHHHHHHHHHhc------CC---
Confidence 578999999998 899999999976553321100 00112456889999999999999999999872 35
Q ss_pred ccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHH
Q 001971 793 NKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIH 872 (988)
Q Consensus 793 ~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evve 872 (988)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+.+||.++++
T Consensus 305 --------------~~n~~d~~g~TpL~~A~~-~g~~~iv~~Ll~~------gad~~~~d~~g~t~l~~A~~~g~~~iv~ 363 (373)
T 2fo1_E 305 --------------NKDKQDEDGKTPIMLAAQ-EGRIEVVMYLIQQ------GASVEAVDATDHTARQLAQANNHHNIVD 363 (373)
T ss_dssp --------------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCSSCCCSSSCCHHHHHHHTTCHHHHH
T ss_pred --------------CccCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCccCCCCCCCCHHHHHHHcCCHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999
Q ss_pred HHHHhhhcC
Q 001971 873 LVQKKINKR 881 (988)
Q Consensus 873 LL~~k~ak~ 881 (988)
+|.++++++
T Consensus 364 ~Ll~~~a~~ 372 (373)
T 2fo1_E 364 IFDRCRPER 372 (373)
T ss_dssp HHHTTC---
T ss_pred HHHhcCccc
Confidence 999987654
No 33
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.83 E-value=2.8e-20 Score=185.30 Aligned_cols=126 Identities=25% Similarity=0.237 Sum_probs=114.3
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.+.|+.|++.|+.++|+.||+.+++.+. .+..|.||||+|+..++.+++++||+. |+
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~Gadvn~---------~d~~g~t~l~~a~~~~~~~~~~~ll~~-------ga------- 61 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIENGADVNA---------SDSDGRTPLHHAAENGHKEVVKLLISK-------GA------- 61 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCCCC---------cCCCCCCHHHHHHHcCCHHHHHHHHhc-------cc-------
Confidence 4579999999999999999996553221 245689999999999999999999999 77
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 876 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~ 876 (988)
++|.+|..|+||||+|+. .|+.++|++|+++ ||++|.+|.+|+||||+|+..|+.+++++|.+
T Consensus 62 ----------d~~~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~------gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 62 ----------DVNAKDSDGRTPLHHAAE-NGHKEVVKLLISK------GADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp ----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------chhhhccCCCCHHHHHHH-cCCHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcCC
Q 001971 877 KINKRP 882 (988)
Q Consensus 877 k~ak~~ 882 (988)
++++..
T Consensus 125 ~gad~~ 130 (169)
T 4gpm_A 125 KGADVN 130 (169)
T ss_dssp TTCCTT
T ss_pred cCCCcc
Confidence 987643
No 34
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=3.2e-20 Score=177.67 Aligned_cols=149 Identities=14% Similarity=0.083 Sum_probs=123.2
Q ss_pred cccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchh
Q 001971 675 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLD 753 (988)
Q Consensus 675 ~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~ 753 (988)
++++.+| .+.+..+.||++++.... .-....++||+|+..|+.++++.|++..++.+ .
T Consensus 4 ~~L~~A~~~g~~~~v~~Ll~~g~~~~------------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~ 62 (153)
T 1awc_B 4 KKLLEAARAGQDDEVRILMANGAPFT------------TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD---------A 62 (153)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTCCCC------------CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT---------C
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCCCC------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------C
Confidence 3456666 466777777777663111 11235789999999999999999998644321 1
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHH
Q 001971 754 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 833 (988)
Q Consensus 754 ~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~ 833 (988)
.+..|.||||+|++.|+.++|++|+++ |+ ++|.+|..|.||||+|+. .|+.++++
T Consensus 63 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~ 117 (153)
T 1awc_B 63 RTKVDRTPLHMAASEGHANIVEVLLKH-------GA-----------------DVNAKDMLKMTALHWATE-HNHQEVVE 117 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHH
T ss_pred CCCCCCCHHHHHHHcChHHHHHHHHHc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHH
Confidence 244588999999999999999999999 77 889999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 834 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 834 lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
+|+++ |++++.+|..|.||||+|+..|+.+++++|+
T Consensus 118 ~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~ 153 (153)
T 1awc_B 118 LLIKY------GADVHTQSKFCKTAFDISIDNGNEDLAEILQ 153 (153)
T ss_dssp HHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHC
T ss_pred HHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHhC
Confidence 99999 9999999999999999999999999999873
No 35
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.83 E-value=2.3e-20 Score=197.60 Aligned_cols=181 Identities=14% Similarity=0.048 Sum_probs=141.8
Q ss_pred hhhhHHHHHHHHhhhcCc--chhhhhcCCcccHHHH-HHHHHHHhHhhcccc-cccccCCCCCCCCCccccccchHHHHH
Q 001971 648 DVCSEIRMLESALEFNRT--DADVERFGKIDTKNQA-MDFIHEIGWLFHRSQ-SKSRLGHLDPNTDLFPLRRFKWLIEFS 723 (988)
Q Consensus 648 ~iCsEI~~LE~~le~~a~--~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~-~~~~~~~~d~~~~l~qi~R~k~lL~~A 723 (988)
.+...+..++..++.... ....+..|.+++|.+| .+.+..+.+|+.++. ..... .....++||+|
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~~g~tpL~~a 152 (276)
T 4hbd_A 84 LVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQ-----------NRAGYSPIMLT 152 (276)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCC-----------CTTSCCHHHHG
T ss_pred HHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCC-----------CCCCCCHHHHH
Confidence 344455555555443322 1112456889999988 578888888888774 21111 22357899999
Q ss_pred H-----HcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccccc
Q 001971 724 M-----DHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVD 798 (988)
Q Consensus 724 v-----e~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~ 798 (988)
+ ..++.++++.|++...... ..+..|.||||+|++.|+.++|++||++ |+
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-------ga--------- 207 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLGNINA---------KASQAGQTALMLAVSHGRVDVVKALLAC-------EA--------- 207 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHSCTTC---------CCTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC---------
T ss_pred HHHHhhhhhhHHHHHHHHHcCCCcc---------ccCCCCCCHHHHHHHcCCHHHHHHHHhC-------CC---------
Confidence 8 6688889999888542111 1244588999999999999999999999 88
Q ss_pred ccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhc-CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 001971 799 GVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD-DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 877 (988)
Q Consensus 799 ~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~-~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k 877 (988)
++|.+|..|+||||+|+. .|+.++|++|++ . |++++.+|..|.||||+|+..|+.+++++|.++
T Consensus 208 --------d~n~~d~~G~TpLh~A~~-~g~~~iv~~Ll~~~------gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 208 --------DVNVQDDDGSTALMCACE-HGHKEIAGLLLAVP------SCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp --------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHTST------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCHHHHHHH-CCCHHHHHHHHhcC------CCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 899999999999999999 999999999999 6 999999999999999999999999999999988
Q ss_pred hh
Q 001971 878 IN 879 (988)
Q Consensus 878 ~a 879 (988)
.+
T Consensus 273 ~~ 274 (276)
T 4hbd_A 273 MN 274 (276)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 36
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=4.6e-20 Score=204.58 Aligned_cols=187 Identities=18% Similarity=0.191 Sum_probs=111.6
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccc
Q 001971 639 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 717 (988)
Q Consensus 639 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k 717 (988)
..|+++|... ..+..++.+++.++.....+..|.+++|.++ .+.+..+.||+.++...... .....
T Consensus 213 ~t~L~~A~~~--~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----------~~~g~ 279 (437)
T 1n11_A 213 YTPLHIAAKQ--NQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG-----------NKSGL 279 (437)
T ss_dssp CCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC-----------CTTCC
T ss_pred CCHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCC-----------CCCCC
Confidence 4455544432 4455555555555544333445566666666 35555556665544211111 11235
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 001971 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (988)
Q Consensus 718 ~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~ 797 (988)
++||+|+..++.++++.|++..++.+. .+..|.||||+|++.|+.++|++||++ |+
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-------- 335 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHGVMVDA---------TTRMGYTPLHVASHYGNIKLVKFLLQH-------QA-------- 335 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTC---------CCSSCCCHHHHHHHSSCSHHHHHHHHT-------TC--------
T ss_pred CHHHHHHHcCCHHHHHHHHhCCccCCC---------CCCCCCCHHHHHHHcCcHHHHHHHHhc-------CC--------
Confidence 566666666666666666664332110 123456666666666666666666666 55
Q ss_pred cccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 001971 798 DGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 877 (988)
Q Consensus 798 ~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k 877 (988)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++.+|.+|.||||+|+..|+.+++++|...
T Consensus 336 ---------d~n~~~~~g~t~L~~A~~-~g~~~iv~~Ll~~------ga~~~~~~~~g~t~l~~A~~~g~~~~~~~l~~~ 399 (437)
T 1n11_A 336 ---------DVNAKTKLGYSPLHQAAQ-QGHTDIVTLLLKN------GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVV 399 (437)
T ss_dssp ---------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCCHHHHHHH-CChHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhc
Confidence 667777777777777777 7777777777777 777777777777777777777777777777655
Q ss_pred h
Q 001971 878 I 878 (988)
Q Consensus 878 ~ 878 (988)
.
T Consensus 400 ~ 400 (437)
T 1n11_A 400 T 400 (437)
T ss_dssp C
T ss_pred c
Confidence 4
No 37
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.83 E-value=4.2e-20 Score=186.95 Aligned_cols=176 Identities=18% Similarity=0.106 Sum_probs=136.4
Q ss_pred CCcccHHHH-HHHHHHHhHhhcc-cccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCC
Q 001971 673 GKIDTKNQA-MDFIHEIGWLFHR-SQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 673 g~~~lh~~a-m~fL~EIGWLLqr-~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
|.+++|.+| .+.+..+.+|+.+ +......+ ....++||+|+..|+.++|+.|++...+.... .
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~----~ 67 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRG-----------AMGETALHIAALYDNLEAAMVLMEAAPELVFE----P 67 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC----C
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCcccCC-----------CCCCCHHHHHHHcCCHHHHHHHHHcCchhccc----c
Confidence 678899999 5888889999887 43222221 23578999999999999999999975542110 0
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
....+..|.||||+|+..|+.++|++||++ |++... ......+.+.++..|..|.||||+|+. .|+.+
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~----~~~~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~ 135 (232)
T 2rfa_A 68 MTSELYEGQTALHIAVINQNVNLVRALLAR-------GASVSA----RATGSVFHYRPHNLIYYGEHPLSFAAC-VGSEE 135 (232)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TCCTTC----CCCSGGGSCCTTCSCCCCSSHHHHHHH-HTCHH
T ss_pred ccccCCCCcCHHHHHHHcCCHHHHHHHHhC-------CCCCCc----ccCCcceeecccccccCCCCHHHHHHH-cCCHH
Confidence 011344688999999999999999999999 552111 011122344566677799999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH----HHHHHhhhcC
Q 001971 831 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI----HLVQKKINKR 881 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evv----eLL~~k~ak~ 881 (988)
+|++|+++ |++++.+|..|.||||+|+..|+.+++ ++|.+++++.
T Consensus 136 ~v~~Ll~~------ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 136 IVRLLIEH------GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp HHHHHHHT------TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 99999999 999999999999999999999999998 7777777643
No 38
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.83 E-value=5.5e-20 Score=203.94 Aligned_cols=192 Identities=19% Similarity=0.208 Sum_probs=161.6
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... ..+..++.+++.++.....+..|.+++|.++ .+.+..+.||++.+......+ ...
T Consensus 179 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-----------~~g 245 (437)
T 1n11_A 179 GLTPLHVAVHH--NNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAES-----------VQG 245 (437)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCC
Confidence 36788776644 5677888888888766555567899999999 588888899998875322222 134
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.++||+|+..|+.++|+.|++..++.+. .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------- 302 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQANGNL---------GNKSGLTPLHLVAQEGHVPVADVLIKH-------GV------- 302 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCTTC---------CCTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-------
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHhC-------Cc-------
Confidence 7899999999999999999986543221 244588999999999999999999999 77
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 876 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~ 876 (988)
++|..+..|+||||+|+. .|+.++|++|+++ |+++|.+|..|.||||+|+.+||.+++++|.+
T Consensus 303 ----------~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~ 365 (437)
T 1n11_A 303 ----------MVDATTRMGYTPLHVASH-YGNIKLVKFLLQH------QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLK 365 (437)
T ss_dssp ----------CTTCCCSSCCCHHHHHHH-SSCSHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------cCCCCCCCCCCHHHHHHH-cCcHHHHHHHHhc------CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHH
Confidence 889999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcCC
Q 001971 877 KINKRP 882 (988)
Q Consensus 877 k~ak~~ 882 (988)
++++..
T Consensus 366 ~ga~~~ 371 (437)
T 1n11_A 366 NGASPN 371 (437)
T ss_dssp TTCCSC
T ss_pred CcCCCC
Confidence 988654
No 39
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.83 E-value=2.2e-20 Score=194.82 Aligned_cols=207 Identities=14% Similarity=0.056 Sum_probs=148.3
Q ss_pred CcceeecchhhhhHHHHHHHHhh----hcCcchh----hhhcCCcccHHHHH----HHHHHHhHhhcccccccc----cC
Q 001971 639 FFPFIVAEEDVCSEIRMLESALE----FNRTDAD----VERFGKIDTKNQAM----DFIHEIGWLFHRSQSKSR----LG 702 (988)
Q Consensus 639 ffP~LVad~~iCsEI~~LE~~le----~~a~~~~----~~~~g~~~lh~~am----~fL~EIGWLLqr~~~~~~----~~ 702 (988)
..|++.|... +.+..++.+++ .+....+ .+..|.+++|.+|. +.+..+.+|++++..... ..
T Consensus 14 ~t~L~~A~~~--g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 14 RRSIFDAVAQ--SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp HHHHHHHHHT--TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred chHHHHHHHc--CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 5677766543 44444444443 3332221 14578999999985 677777777776531000 00
Q ss_pred CCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCC-----CCchhhccCCCcHHHHHHHcCCHHHHHHH
Q 001971 703 HLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE-----HPSLDLALTELGLLHRAVRKNSRPLVDLL 777 (988)
Q Consensus 703 ~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~-----~~~l~~~l~G~TpLH~AVr~g~~eiVelL 777 (988)
.. . ...-....++||+|+..|+.++|++||+..++.+..... ......+..|.||||+|++.|+.++|++|
T Consensus 92 ~~---~-~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 92 AS---Y-TDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp CC---C-CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred cc---c-ccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 00 0 001124678999999999999999999976543321000 00000112588999999999999999999
Q ss_pred hc---cCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCC---------HHHHHHhhcCCCCCccc
Q 001971 778 LR---FVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS---------EDVLDALTDDPGMVGIE 845 (988)
Q Consensus 778 L~---~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~---------~eVV~lLL~~p~~vg~g 845 (988)
|+ + |+ ++|.+|..|+||||+|+. .|+ .+++++|+++ |
T Consensus 168 l~~~~~-------ga-----------------d~~~~d~~g~tpLh~A~~-~~~~~~~~~~~~~~~v~~Ll~~------g 216 (273)
T 2pnn_A 168 LQNSWQ-------PA-----------------DISARDSVGNTVLHALVE-VADNTVDNTKFVTSMYNEILIL------G 216 (273)
T ss_dssp HHCSSC-------CC-----------------CTTCCCTTSCCHHHHHHH-HCCSCHHHHHHHHHHHHHHHHH------H
T ss_pred HhcccC-------CC-----------------CceeeCCCCCcHHHHHHH-ccCcchhHHHHHHHHHHHHHHh------h
Confidence 99 6 77 899999999999999999 787 7999999999 9
Q ss_pred cccc-------cCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 846 AWKN-------ARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 846 Advn-------arD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
++++ .+|..|.||||+|+..||.+++++|.+++++-+
T Consensus 217 a~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp 260 (273)
T 2pnn_A 217 AKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEP 260 (273)
T ss_dssp HHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC--
T ss_pred hhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCc
Confidence 9997 499999999999999999999999999999543
No 40
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.83 E-value=8.5e-21 Score=178.90 Aligned_cols=125 Identities=22% Similarity=0.220 Sum_probs=113.1
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
...++||+|+..++.++|+.||+..++.+ ..+..|.||||+|+. |+.++|++||++ |+
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~----- 68 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPN---------ALNRFGRRPIQVMMM-GSAQVAELLLLH-------GA----- 68 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCCTTCCTTTTTSTT-SCHHHHHHHHHH-------TC-----
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcC---------CcCCCCCCHHHHHHc-CCHHHHHHHHHC-------CC-----
Confidence 45789999999999999999999643311 124568899999999 999999999999 77
Q ss_pred ccccccccccccCCccCCCC-CChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPA-GLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 873 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~-G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveL 873 (988)
++|.+|.. |.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++
T Consensus 69 ------------~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~ 129 (136)
T 1d9s_A 69 ------------EPNCADPATLTRPVHDAAR-EGFLDTLVVLHRA------GARLDVCDAWGRLPVDLAEEQGHRDIARY 129 (136)
T ss_dssp ------------CSSCCBTTTTBCHHHHHHH-HTCHHHHHHHHHT------CCCCCCCSSSSSCHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 88999999 9999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhc
Q 001971 874 VQKKINK 880 (988)
Q Consensus 874 L~~k~ak 880 (988)
|.+++++
T Consensus 130 Ll~~Gad 136 (136)
T 1d9s_A 130 LHAATGD 136 (136)
T ss_dssp HHHHHCC
T ss_pred HHHcCCC
Confidence 9999874
No 41
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.83 E-value=3.6e-21 Score=204.21 Aligned_cols=183 Identities=17% Similarity=0.099 Sum_probs=134.9
Q ss_pred CcceeecchhhhhHH-HHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 639 FFPFIVAEEDVCSEI-RMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 639 ffP~LVad~~iCsEI-~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
..|++.+.. +... ..++.+++.|++....+..|.+++|.+| .+.+..+.+|+.++......+ ...
T Consensus 53 ~t~L~~a~~--~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~-----------~~g 119 (269)
T 4b93_B 53 CHPLCQCPK--CAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARN-----------ADQ 119 (269)
T ss_dssp ------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCC-----------TTC
T ss_pred CCHHHHHHH--hCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccC-----------CCC
Confidence 566665542 2332 3566777888776555678999999999 477888888888774322221 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.++|++|+..++.++++.||+..++.+ . .+..|+||||+||+.|+.++|++||++ |+
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g~~~n----~-----~d~~g~TpL~~A~~~g~~~~v~~Ll~~-------ga------- 176 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSNAKPN----K-----KDLSGNTPLIYACSGGHHELVALLLQH-------GA------- 176 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCSC----C-----CCTTCCCHHHHHHHTTCGGGHHHHHHT-------TC-------
T ss_pred CCccccccccChHHHHHHHHHCCCCCC----C-----CCCCCCCHHHHHHHCCCHHHHHHHHHC-------CC-------
Confidence 789999999999999999999654321 1 345689999999999999999999999 88
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 876 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~ 876 (988)
++|..+..|.||||+||. .|+.++|++|+++ ||+++++|..|+||||+|+.+++ ++++|+.
T Consensus 177 ----------dvn~~~~~g~t~Lh~A~~-~g~~~~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~~~--i~~lL~~ 237 (269)
T 4b93_B 177 ----------SINASNNKGNTALHEAVI-EKHVFVVELLLLH------GASVQVLNKRQRTAVDCAEQNSK--IMELLQV 237 (269)
T ss_dssp ----------CTTCBCTTSCBHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCSGGGSCTTCH--HHHHTTC
T ss_pred ----------CCCccccCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHhCCc--HHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999987664 5555543
No 42
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=3.7e-20 Score=174.53 Aligned_cols=124 Identities=22% Similarity=0.153 Sum_probs=111.7
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
...++||+|+..|+.++|+.|++..++.+ . .+..|.||||+|+..|+.++|++||++ |+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~----~-----~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~----- 71 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVN----A-----KDEYGLTPLYLATAHGHLEIVEVLLKN-------GA----- 71 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTT----C-----CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCC----C-----cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 46889999999999999999999644311 1 244588999999999999999999999 77
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 874 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL 874 (988)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|
T Consensus 72 ------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~tpl~~A~~~~~~~~~~~L 132 (136)
T 2jab_A 72 ------------DVNAVDAIGFTPLHLAAF-IGHLEIAEVLLKH------GADVNAQDKFGKTAFDISIGNGNEDLAEIL 132 (136)
T ss_dssp ------------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCcCcCCCCCCHHHHHHHCCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhh
Q 001971 875 QKKI 878 (988)
Q Consensus 875 ~~k~ 878 (988)
.+++
T Consensus 133 l~~G 136 (136)
T 2jab_A 133 QKLN 136 (136)
T ss_dssp HHC-
T ss_pred HHcC
Confidence 8764
No 43
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.83 E-value=1.6e-20 Score=181.05 Aligned_cols=157 Identities=19% Similarity=0.140 Sum_probs=124.9
Q ss_pred cCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCC
Q 001971 672 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 672 ~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
.+.+++|.++ .+.+..+.+++..... . . ...-.+..++||+|+..++.++++.|++..++.+
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~~~----~-~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------- 69 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQSV----N-C-----RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH------- 69 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTTTT----T-C-----CCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT-------
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcCCC----C-c-----cccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC-------
Confidence 3456778888 5888888888875421 0 0 0111234689999999999999999998644321
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
..+..|.||||+|++.|+.++|++|+++ |+ ++|..|..|.||||+|+. .|+.+
T Consensus 70 --~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~ 122 (165)
T 3twr_A 70 --AKDKGGLVPLHNACSYGHYEVAELLVKH-------GA-----------------VVNVADLWKFTPLHEAAA-KGKYE 122 (165)
T ss_dssp --CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHH
T ss_pred --ccCCCCCCHHHHHHHcCcHHHHHHHHhC-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHH
Confidence 1244588999999999999999999998 77 788899999999999999 89999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhh
Q 001971 831 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKIN 879 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~a 879 (988)
++++|+++ |++++.+|..|.||||+|+. |+.+++++|.++++
T Consensus 123 ~v~~Ll~~------ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 123 ICKLLLQH------GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHT------TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHc------CCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 99999999 99999999999999999876 89999999988764
No 44
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.83 E-value=5.4e-20 Score=186.35 Aligned_cols=188 Identities=16% Similarity=0.130 Sum_probs=155.5
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhccccc-ccccCCCCCCCCCccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRR 715 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~-~~~~~~~d~~~~l~qi~R 715 (988)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.||+.++.. ... .-..
T Consensus 44 g~t~L~~A~~~--~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~-----------~~~~ 110 (237)
T 3b7b_A 44 QRTPLMEAAEN--NHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNC-----------QDDG 110 (237)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTC-----------CCTT
T ss_pred CCCHHHHHHHh--CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCccc-----------CCCC
Confidence 46788887654 6788889999988876655677899999999 5888889999887621 111 1123
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||+|+..++.++++.|++..++.+. .+..|.||||+|++.|+.+++++|+++ |+
T Consensus 111 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------ 168 (237)
T 3b7b_A 111 GWTPMIWATEYKHVDLVKLLLSKGSDINI---------RDNEENICLHWAAFSGCVDIAEILLAA-------KC------ 168 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHHCCHHHHHHHHTT-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCc---------cCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC------
Confidence 57899999999999999999996543211 244588999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+...+..|.
T Consensus 169 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 169 -----------DLHAVNIHGDSPLHIAAR-ENRYDCVVLFLSR------DSDVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-hCCHhHHHHHHHc------CCCCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999987666555
Q ss_pred Hhh
Q 001971 876 KKI 878 (988)
Q Consensus 876 ~k~ 878 (988)
+.+
T Consensus 231 ~~l 233 (237)
T 3b7b_A 231 KAL 233 (237)
T ss_dssp HHH
T ss_pred HHh
Confidence 543
No 45
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.82 E-value=9.5e-20 Score=165.85 Aligned_cols=125 Identities=27% Similarity=0.283 Sum_probs=112.7
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
.+++||+|+..++.++++.|++...+.+ . .+..|.||||+|+..++.+++++|++. |+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~----~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~------ 59 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVN----A-----KDKNGRTPLHLAARNGHLEVVKLLLEA-------GA------ 59 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTT----C-----CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC------
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCC----C-----cCCCCCcHHHHHHHcCcHHHHHHHHHc-------CC------
Confidence 3679999999999999999999654321 1 234588999999999999999999999 76
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
+++..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 60 -----------~~~~~~~~g~t~l~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 121 (126)
T 1n0r_A 60 -----------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLEA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLL 121 (126)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCcccCCCCCcHHHHHHH-cChHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 788999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hhhhc
Q 001971 876 KKINK 880 (988)
Q Consensus 876 ~k~ak 880 (988)
+++++
T Consensus 122 ~~Gad 126 (126)
T 1n0r_A 122 EAGAY 126 (126)
T ss_dssp HHTCC
T ss_pred HcCCC
Confidence 99864
No 46
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.82 E-value=7.6e-20 Score=188.78 Aligned_cols=189 Identities=17% Similarity=0.095 Sum_probs=139.1
Q ss_pred hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCC
Q 001971 670 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 748 (988)
Q Consensus 670 ~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~ 748 (988)
+..|.+++|.+| .+.+..+.+|+.++....... ..-....+|||+|+..|+.++|+.||+..++.+.
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---- 73 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLD--------LQNDLGQTALHLAAILGEASTVEKLYAAGAGVLV---- 73 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGG--------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC----
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccc--------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----
Confidence 457899999999 588888888887764211111 1112357899999999999999999996543221
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccC------------ccccccccc-----------cccccc
Q 001971 749 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLG------------SENKALVDG-----------VHKGFL 805 (988)
Q Consensus 749 ~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~------------~~~~~l~~~-----------s~~~y~ 805 (988)
.+..|.||||+|++.|+.++|++|+++.+....+... ....++... ....+.
T Consensus 74 -----~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (282)
T 1oy3_D 74 -----AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWR 148 (282)
T ss_dssp -----CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGG
T ss_pred -----CCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhh
Confidence 2446889999999999999999999984321000000 000000000 011123
Q ss_pred cCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 806 FRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 806 fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~-~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
.++|..+..|.||||+|+. .|+.++|++|+++ |++++.+|. .|.||||+|+..|+.+++++|.+++++..
T Consensus 149 ~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~ 219 (282)
T 1oy3_D 149 LQLEAENYDGHTPLHVAVI-HKDAEMVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219 (282)
T ss_dssp GGTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hcCCCcCCCCcCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 4688899999999999999 9999999999999 999999996 49999999999999999999999987643
No 47
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.82 E-value=4e-20 Score=193.70 Aligned_cols=215 Identities=14% Similarity=0.078 Sum_probs=155.4
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccc
Q 001971 639 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 717 (988)
Q Consensus 639 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k 717 (988)
-.|++.|... +.+..++.+++.++.....+..|.+++|.+| .+.+..+.||+.++......+ ....
T Consensus 41 ~t~l~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~-----------~~g~ 107 (299)
T 1s70_B 41 GAVFLAACSS--GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD-----------NEGW 107 (299)
T ss_dssp HHHHHHHHHH--TCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSC
T ss_pred ccHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC-----------CCCC
Confidence 4566665544 7888999999988876655678999999999 488888999998874322222 2357
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc----
Q 001971 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN---- 793 (988)
Q Consensus 718 ~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~---- 793 (988)
+|||+|+..|+.++|+.||+..++.+. .+..|.||||+|+..++.++++.|+... |.+...
T Consensus 108 tpL~~A~~~g~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~~~~ll~~~------~~~~~~~~~~ 172 (299)
T 1s70_B 108 IPLHAAASCGYLDIAEYLISQGAHVGA---------VNSEGDTPLDIAEEEAMEELLQNEVNRQ------GVDIEAARKE 172 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHCCSHHHHHHHHHHHHHH------TCCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCC---------cCCCCCCHHHHHHhcchHHHHHHHHhhc------CCCchhhhhh
Confidence 899999999999999999996543211 2445789999999999888888777531 110000
Q ss_pred ---------cccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 001971 794 ---------KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARL 864 (988)
Q Consensus 794 ---------~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~ 864 (988)
..+.... .......+..|.||||+||. .|+.++|++|+++ |++++.+|..|.||||+|+.
T Consensus 173 ~~~~~~~~~~~~l~~~----~~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~d~~~~d~~g~tpL~~A~~ 241 (299)
T 1s70_B 173 EERIMLRDARQWLNSG----HINDVRHAKSGGTALHVAAA-KGYTEVLKLLIQA------RYDVNIKDYDGWTPLHAAAH 241 (299)
T ss_dssp HHHHHHHHHHHHHHHT----CCCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHH
T ss_pred hhhHHHHHHHHHHhcc----CcchhhhcCCCCCHHHHHHH-CCcHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHh
Confidence 0000000 01233456778999999998 8999999999988 89999999999999999999
Q ss_pred cCCHHHHHHHHHhhhcCCC---CCceeeeeC
Q 001971 865 RGHYSYIHLVQKKINKRPN---GGHVVVDIC 892 (988)
Q Consensus 865 rGh~evveLL~~k~ak~~~---~~~v~v~ip 892 (988)
.|+.+++++|.+++++... .+...+++.
T Consensus 242 ~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A 272 (299)
T 1s70_B 242 WGKEEACRILVENLCDMEAVNKVGQTAFDVA 272 (299)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCTTTSC
T ss_pred cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 9999999999998876432 334444444
No 48
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.81 E-value=7.5e-20 Score=179.47 Aligned_cols=159 Identities=17% Similarity=0.106 Sum_probs=132.8
Q ss_pred CCcccHHHH-HHHHHHHhHhhccccc-ccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCC
Q 001971 673 GKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 673 g~~~lh~~a-m~fL~EIGWLLqr~~~-~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
+..+++.+| .+.+..+.++++.... ... .-....++||+|+..++.++|+.|++..++.+.
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~-----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------ 67 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQ-----------GDDHGFSPLHWACREGRSAVVEMLIMRGARINV------ 67 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTC-----------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccc-----------cCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCC------
Confidence 446777777 5888888888887421 111 112357899999999999999999996543211
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
.+..|.||||+|+..|+.++|++||++ |+ ++|..|..|.||||+|+. .|+.+
T Consensus 68 ---~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~ 119 (179)
T 3f6q_A 68 ---MNRGDDTPLHLAASHGHRDIVQKLLQY-------KA-----------------DINAVNEHGNVPLHYACF-WGQDQ 119 (179)
T ss_dssp ---CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHH
T ss_pred ---cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHH
Confidence 244588999999999999999999999 77 889999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 831 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
++++|+++ |++++.+|..|.||||+|+..++.+++++|.+++++..
T Consensus 120 ~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 120 VAEDLVAN------GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHHT------TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHC------CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 99999999 99999999999999999999999999999999988764
No 49
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.81 E-value=4e-19 Score=182.37 Aligned_cols=200 Identities=14% Similarity=0.029 Sum_probs=159.9
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... +.++.++.+++.++.....+..|.+++|.++ .+.+..+.+|++++......+ ...
T Consensus 39 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-----------~~g 105 (285)
T 1wdy_A 39 GWTPLHNAVQM--SREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD-----------FYG 105 (285)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC-----------TTC
T ss_pred CCcHHHHHHHc--CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-----------ccc
Confidence 36788887654 6778888899988876655678899999999 588888899988774322222 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCc-hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS-LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~-l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
.++||+|+..++.++++.|++..++.+........ ...+..|.||||+|++.|+.++|++|++.. |+
T Consensus 106 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------~~------ 173 (285)
T 1wdy_A 106 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM------GA------ 173 (285)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS------CC------
T ss_pred CCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc------CC------
Confidence 78999999999999999999976543321110000 001455889999999999999999999862 44
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCC----HHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS----EDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYI 871 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~----~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evv 871 (988)
++|..+..|.||||+|+. .|+ .+++++|+++ |++++.+|..|.||||+|+..|+.+++
T Consensus 174 -----------~~~~~~~~g~t~l~~a~~-~~~~~~~~~i~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v 235 (285)
T 1wdy_A 174 -----------DVNACDNMGRNALIHALL-SSDDSDVEAITHLLLDH------GADVNVRGERGKTPLILAVEKKHLGLV 235 (285)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-CSCTTTHHHHHHHHHHT------TCCSSCCCTTSCCHHHHHHHTTCHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-ccccchHHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 789999999999999999 888 8999999999 999999999999999999999999999
Q ss_pred HHHHH-hhhc
Q 001971 872 HLVQK-KINK 880 (988)
Q Consensus 872 eLL~~-k~ak 880 (988)
++|.+ ++++
T Consensus 236 ~~Ll~~~g~~ 245 (285)
T 1wdy_A 236 QRLLEQEHIE 245 (285)
T ss_dssp HHHHHSSSCC
T ss_pred HHHHhccCCC
Confidence 99998 5443
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.81 E-value=1.4e-19 Score=186.51 Aligned_cols=135 Identities=21% Similarity=0.097 Sum_probs=113.2
Q ss_pred ccchHHHHHHHc---CchHHHHHHhhhhccccc-c--CCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccc
Q 001971 715 RFKWLIEFSMDH---EWCAVVKKLLHILLDGTV-S--LGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDR 788 (988)
Q Consensus 715 R~k~lL~~Ave~---g~~aVVk~LL~~l~dg~v-d--~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~G 788 (988)
...++||+|+.. |+.++|+.||+..++.+. + .... ....+..|.||||+|++.|+.++|++||++ |
T Consensus 42 ~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------g 113 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQ-CTDEFYQGHSALHIAIEKRSLQCVKLLVEN-------G 113 (256)
T ss_dssp TTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCC-CCSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------T
T ss_pred CCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccc-cccccccCCCHHHHHHHcCCHHHHHHHHHc-------C
Confidence 458899999999 999999999998765431 1 0000 001234589999999999999999999999 6
Q ss_pred cCccccccccccccccccCCccCCCC-------------CChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCC
Q 001971 789 LGSENKALVDGVHKGFLFRPDVIGPA-------------GLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARD 852 (988)
Q Consensus 789 a~~~~~~l~~~s~~~y~fdpN~~d~~-------------G~TPLHiAA~~~G~~eVV~lLL~---~p~~vg~gAdvnarD 852 (988)
+ ++|..+.. |.||||+|+. .|+.++|++|++ + |+++|.+|
T Consensus 114 a-----------------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~~~~------ga~~n~~d 169 (256)
T 2etb_A 114 A-----------------DVHLRACGRFFQKHQGTCFYFGELPLSLAAC-TKQWDVVTYLLENPHQ------PASLEATD 169 (256)
T ss_dssp C-----------------CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCC
T ss_pred C-----------------CCCcccccccccccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccc------CCCcCccC
Confidence 6 55665554 9999999999 999999999999 7 99999999
Q ss_pred CCCCCHHHHHHH--cCCHH-------HHHHHHHhhhcC
Q 001971 853 SSGSTPEDYARL--RGHYS-------YIHLVQKKINKR 881 (988)
Q Consensus 853 ~~G~TPLh~A~~--rGh~e-------vveLL~~k~ak~ 881 (988)
..|.||||+|+. .++.+ ++++|.+++++.
T Consensus 170 ~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 170 SLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 999999999999 88988 999999998876
No 51
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=2.3e-20 Score=179.94 Aligned_cols=127 Identities=23% Similarity=0.218 Sum_probs=111.3
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
...++||+|+..|+.++|+.||+..++.+ . .+..|.||||+|+ .|+.++|++||++ |+
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~-----~~~~g~t~L~~A~-~~~~~~v~~Ll~~-------g~----- 68 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGANPN----A-----PNSYGRRPIQVMM-MGSARVAELLLLH-------GA----- 68 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTCCTT----C-----CCSSSCCTTTSSC-TTCHHHHHHHHTT-------TC-----
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCCCCC----C-----CCCCCCCHHHHHH-cCCHHHHHHHHHc-------CC-----
Confidence 45789999999999999999998644311 1 2446889999996 9999999999999 77
Q ss_pred ccccccccccccCCccCCCCCCh-HHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLT-PIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 873 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~T-PLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveL 873 (988)
++|.+|..|.| |||+|+. .|+.++|++|+++ |++++.+|..|.||||+|+..|+.+++++
T Consensus 69 ------------~~~~~d~~g~ttpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~v~~ 129 (156)
T 1bi7_B 69 ------------EPNCADPATLTRPVHDAAR-EGFLDTLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARY 129 (156)
T ss_dssp ------------CCCCCCTTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred ------------CCCCcCCCCCcHHHHHHHH-CCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHHHHH
Confidence 88999999999 9999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcCC
Q 001971 874 VQKKINKRP 882 (988)
Q Consensus 874 L~~k~ak~~ 882 (988)
|.+++++..
T Consensus 130 Ll~~ga~~~ 138 (156)
T 1bi7_B 130 LRAAAGGTR 138 (156)
T ss_dssp HSSCC----
T ss_pred HHHcCCCCC
Confidence 999988654
No 52
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.81 E-value=5.8e-20 Score=195.10 Aligned_cols=190 Identities=15% Similarity=0.056 Sum_probs=152.7
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... +.+..++.+++.++..... +|.+++|.+| .+.+..+.+|++++......+ ...
T Consensus 31 g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d-----------~~g 95 (285)
T 3kea_A 31 GHSASYYAIAD--NNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGLDDSQFD-----------DKG 95 (285)
T ss_dssp SCCHHHHHHHT--TCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCC-----------TTS
T ss_pred CCCHHHHHHHc--CCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-----------CCC
Confidence 46788887654 7778888899887765432 5889999998 478888888888764322222 235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCC-CcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTE-LGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G-~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
.+|||+|+..|+.++|+.|++..++.+. .+..| .||||+|+..|+.++|++|+++ |+
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---------~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 153 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKKNWRLMF---------YGKTGWKTSFYHAVMLNDVSIVSYFLSE-------IP------ 153 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGGG---------CSSSGGGSHHHHHHHTTCHHHHHHHHTT-------SC------
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCCc---------cCCCCCCCHHHHHHHcCCHHHHHHHHhC-------CC------
Confidence 7899999999999999999997553221 23446 6999999999999999999999 44
Q ss_pred cccccccccccCCccCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCH-HHHHHHcCCHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTP-EDYARLRGHYSYIHL 873 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~-~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TP-Lh~A~~rGh~evveL 873 (988)
+ ..+. .|.||||+|+. .|+.++|++|+++ |++++.+|..|.|| ||+|+..|+.+++++
T Consensus 154 -----------~--~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------gad~n~~~~~g~t~~L~~A~~~~~~~~v~~ 213 (285)
T 3kea_A 154 -----------S--TFDLAILLSCIHITIK-NGHVDMMILLLDY------MTSTNTNNSLLFIPDIKLAIDNKDIEMLQA 213 (285)
T ss_dssp -----------T--TCCCSTHHHHHHHHHH-TTCHHHHHHHHHH------HHHTCTTCCCBCCTTHHHHHHHTCHHHHHH
T ss_pred -----------c--cccccCCccHHHHHHH-cChHHHHHHHHHc------CCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 2 2233 89999999999 9999999999999 99999999999998 999999999999999
Q ss_pred HHHhhhcCCCC
Q 001971 874 VQKKINKRPNG 884 (988)
Q Consensus 874 L~~k~ak~~~~ 884 (988)
|.+++++....
T Consensus 214 Ll~~gad~~~~ 224 (285)
T 3kea_A 214 LFKYDINIYSA 224 (285)
T ss_dssp HTTSCBCSTTT
T ss_pred HHHcCCCCCCC
Confidence 99998876533
No 53
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.80 E-value=2.8e-19 Score=170.50 Aligned_cols=150 Identities=23% Similarity=0.252 Sum_probs=123.2
Q ss_pred cccHHHH-HHHHHHHhHhhcccc-cccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCch
Q 001971 675 IDTKNQA-MDFIHEIGWLFHRSQ-SKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSL 752 (988)
Q Consensus 675 ~~lh~~a-m~fL~EIGWLLqr~~-~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l 752 (988)
+++|.+| .+.+..+.+++++.. ..... .....++||+ +..|+.++++.|++..++.+.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~-------- 63 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDAL-----------NRFGKTALQV-MMFGSTAIALELLKQGASPNV-------- 63 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCC-----------CTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTC--------
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCcccc-----------CCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCC--------
Confidence 4567777 577888888887721 11111 1235789999 999999999999996443211
Q ss_pred hhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHH
Q 001971 753 DLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVL 832 (988)
Q Consensus 753 ~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV 832 (988)
.+..|.||||+|++.|+.++|++|+++ |+ ++|.+|..|.||||+|+. .|+.+++
T Consensus 64 -~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v 117 (156)
T 1bd8_A 64 -QDTSGTSPVHDAARTGFLDTLKVLVEH-------GA-----------------DVNVPDGTGALPIHLAVQ-EGHTAVV 117 (156)
T ss_dssp -CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CSCCCCTTSCCHHHHHHH-HTCHHHH
T ss_pred -cCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC-----------------CCCCcCCCCCcHHHHHHH-hChHHHH
Confidence 244688999999999999999999999 77 889999999999999999 9999999
Q ss_pred HHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 001971 833 DALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKK 877 (988)
Q Consensus 833 ~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k 877 (988)
++|+++ ++++.+|..|.||||+|+..|+.+++++|.++
T Consensus 118 ~~Ll~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 118 SFLAAE-------SDLHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHTT-------SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHhc-------cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 999975 68899999999999999999999999999875
No 54
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.80 E-value=3e-19 Score=187.09 Aligned_cols=161 Identities=14% Similarity=0.033 Sum_probs=130.6
Q ss_pred cCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCC
Q 001971 672 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 672 ~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
.+.+++|.+| .+.+..+.+|+.++......+ ....++||+|+..|+.++|+.||+..++.+.
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~------ 101 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGADINYAN-----------VDGLTALHQACIDDNVDMVKFLVENGANINQ------ 101 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBC-----------TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCCcccC-----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------
Confidence 4567788888 588999999998774322222 2357899999999999999999996543211
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
.+..|.||||+|+..|+.++|++||++ |+ +++..+..|.||||+|+. .|+.+
T Consensus 102 ---~~~~g~tpL~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~l~~A~~-~~~~~ 153 (299)
T 1s70_B 102 ---PDNEGWIPLHAAASCGYLDIAEYLISQ-------GA-----------------HVGAVNSEGDTPLDIAEE-EAMEE 153 (299)
T ss_dssp ---CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHCCS-HHHHH
T ss_pred ---CCCCCCcHHHHHHHcCCHHHHHHHHhC-------CC-----------------CCCCcCCCCCCHHHHHHh-cchHH
Confidence 244588999999999999999999999 77 789999999999999999 89999
Q ss_pred HHHHhhcCCCCCccccccc--------------------------cCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 831 VLDALTDDPGMVGIEAWKN--------------------------ARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvn--------------------------arD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
+++.|+... +++++ ..|..|.||||+|+..|+.+++++|.+++++..
T Consensus 154 ~~~~ll~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~ 226 (299)
T 1s70_B 154 LLQNEVNRQ-----GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVN 226 (299)
T ss_dssp HHHHHHHHH-----TCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHhhc-----CCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 998877642 33332 367899999999999999999999999887543
No 55
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=1.3e-19 Score=192.02 Aligned_cols=188 Identities=15% Similarity=0.067 Sum_probs=152.8
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... +.+..++.+++.++.....+..|.+++|.++ .+.+..+.+|++++..... ....
T Consensus 92 g~t~L~~A~~~--g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------------~~~g 157 (285)
T 3d9h_A 92 HVSPLHEACLG--GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP------------ESDL 157 (285)
T ss_dssp CCCHHHHHHHT--TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC------------SCTT
T ss_pred CCCHHHHHHHC--CcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC------------CCCC
Confidence 47888887654 6677888899988876656678999999999 5888888999887642111 1125
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.++||+|+..|+.++++.|++..++.+ ..+..|.||||+|++.|+.++|++||++ |+
T Consensus 158 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga------- 214 (285)
T 3d9h_A 158 ASPIHEAARRGHVECVNSLIAYGGNID---------HKISHLGTPLYLACENQQRACVKKLLES-------GA------- 214 (285)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCBTTTBCHHHHHHHTTCHHHHHHHHHT-------TC-------
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCCCCC---------CcCCCCCCHHHHHHHcCcHHHHHHHHHC-------CC-------
Confidence 789999999999999999999654321 1345688999999999999999999999 77
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 876 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~ 876 (988)
++|. +..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+ ++.+++++|.+
T Consensus 215 ----------~~~~-~~~g~t~L~~A~~-~~~~~~v~~Ll~~------gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~ 274 (285)
T 3d9h_A 215 ----------DVNQ-GKGQDSPLHAVVR-TASEELACLLMDF------GADTQAKNAEGKRPVELVP--PESPLAQLFLE 274 (285)
T ss_dssp ----------CTTC-CBTTBCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCGGGGSC--TTSHHHHHHHH
T ss_pred ----------CCCC-CCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCcCCCCCCHHHHhc--CccHHHHHHHH
Confidence 6774 8899999999999 9999999999999 9999999999999999999 56789999988
Q ss_pred h-hhcCC
Q 001971 877 K-INKRP 882 (988)
Q Consensus 877 k-~ak~~ 882 (988)
+ +++.+
T Consensus 275 ~~~a~l~ 281 (285)
T 3d9h_A 275 REGASLP 281 (285)
T ss_dssp HC-----
T ss_pred hhccCCC
Confidence 8 55543
No 56
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.80 E-value=2.9e-19 Score=179.27 Aligned_cols=214 Identities=14% Similarity=0.077 Sum_probs=144.2
Q ss_pred CcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccc
Q 001971 639 FFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFK 717 (988)
Q Consensus 639 ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k 717 (988)
.+|++.|. ..+.++.++.+++.+......+..|.+++|.++ .+.+..+.||++++....... .....
T Consensus 10 ~~~l~~A~--~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------~~~~~ 77 (240)
T 3eu9_A 10 TWDIVKAT--QYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG----------GDLNS 77 (240)
T ss_dssp GCCHHHHH--HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB----------TTTTB
T ss_pred chHHHHHH--HcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc----------CCcCC
Confidence 34555433 346777778788777665544566788888887 477777788877764211111 01135
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccc
Q 001971 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALV 797 (988)
Q Consensus 718 ~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~ 797 (988)
++||+|+..++.++++.|++..++.+. .+..|.||||+|++.|+.+++++|+++..+..... ..+.++++
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~ 147 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKYGADPSL---------IDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD-QNGMTPLM 147 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-TTSCCHHH
T ss_pred ChhHHHHHcCCHHHHHHHHHcCCCCcc---------cCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC-CCCCcHHH
Confidence 788888888888888888876433211 23346788888888888888888888732211000 00113333
Q ss_pred cccccc-----------cccCCccCCC-CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 001971 798 DGVHKG-----------FLFRPDVIGP-AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 865 (988)
Q Consensus 798 ~~s~~~-----------y~fdpN~~d~-~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~r 865 (988)
.+...+ +..++|..+. .|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+.+
T Consensus 148 ~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~ 220 (240)
T 3eu9_A 148 WAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVL-AGNTTVISLLLEA------GANVDAQNIKGESALDLAKQR 220 (240)
T ss_dssp HHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCBCTTSCBHHHHHHHT
T ss_pred HHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHc
Confidence 322111 1236777776 89999999999 8999999999999 999999999999999999999
Q ss_pred CCHHHHHHHHHhhhcC
Q 001971 866 GHYSYIHLVQKKINKR 881 (988)
Q Consensus 866 Gh~evveLL~~k~ak~ 881 (988)
|+.+++++|.+++++.
T Consensus 221 ~~~~~v~~L~~~~~~~ 236 (240)
T 3eu9_A 221 KNVWMINHLQEARQAK 236 (240)
T ss_dssp TCHHHHHHHHHHC---
T ss_pred CcHHHHHHHHHhhhcc
Confidence 9999999999887654
No 57
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.80 E-value=4.1e-19 Score=169.91 Aligned_cols=125 Identities=21% Similarity=0.145 Sum_probs=113.3
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
+.++|+.|+..|+.++|+.|++...+.. .+..|.||||+|+..|+.++|++|+++ |+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 58 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT----------TDWLGTSPLHLAAQYGHFSTTEVLLRA-------GV------ 58 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC----------CCTTCCCHHHHHHHHTCHHHHHHHHTT-------TC------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC----------cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 3679999999999999999999654211 244588999999999999999999998 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 59 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 59 -----------SRDARTKVDRTPLHMAAS-EGHANIVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCCCCCCCCHHHHHHH-cChHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 789999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 001971 876 KKINKR 881 (988)
Q Consensus 876 ~k~ak~ 881 (988)
+++++.
T Consensus 121 ~~ga~~ 126 (153)
T 1awc_B 121 KYGADV 126 (153)
T ss_dssp HTTCCT
T ss_pred HcCCCc
Confidence 998764
No 58
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.80 E-value=4.6e-19 Score=170.95 Aligned_cols=129 Identities=23% Similarity=0.206 Sum_probs=113.7
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
...++|+.|+..|+.++++.|++.. ..+. ...+..|.||||+|++.|+.++|++||++ |+
T Consensus 7 ~~~~~l~~A~~~g~~~~v~~ll~~~---~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~----- 66 (165)
T 3twr_A 7 EADRQLLEAAKAGDVETVKKLCTVQ---SVNC-----RDIEGRQSTPLHFAAGYNRVSVVEYLLQH-------GA----- 66 (165)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCCTT---TTTC-----CCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----
T ss_pred hhhHHHHHHHHhCCHHHHHHHHHcC---CCCc-----cccccCCCCHHHHHHHcChHHHHHHHHhc-------CC-----
Confidence 3478999999999999999999842 1111 11244578999999999999999999999 77
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 874 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL 874 (988)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|
T Consensus 67 ------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 127 (165)
T 3twr_A 67 ------------DVHAKDKGGLVPLHNACS-YGHYEVAELLVKH------GAVVNVADLWKFTPLHEAAAKGKYEICKLL 127 (165)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCccCCCCCCHHHHHHH-cCcHHHHHHHHhC------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhhhcCC
Q 001971 875 QKKINKRP 882 (988)
Q Consensus 875 ~~k~ak~~ 882 (988)
.+++++..
T Consensus 128 l~~ga~~~ 135 (165)
T 3twr_A 128 LQHGADPT 135 (165)
T ss_dssp HHTTCCTT
T ss_pred HHcCCCCc
Confidence 99877543
No 59
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.80 E-value=1.2e-19 Score=189.09 Aligned_cols=178 Identities=17% Similarity=0.071 Sum_probs=131.9
Q ss_pred hhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHc---CchHHHHHHhhhhcccc
Q 001971 668 DVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDH---EWCAVVKKLLHILLDGT 743 (988)
Q Consensus 668 ~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~---g~~aVVk~LL~~l~dg~ 743 (988)
+.+..|.+++|.+| .+.+..+.+|++....... ...+ .....-....++||+|+.. |+.++|+.||+..++..
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-~~~~--~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKK-RLTD--SEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCC-CTTS--GGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhccc-ccCC--cccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 34567889999988 4666666666653210000 0000 0001122468899999987 99999999999875422
Q ss_pred -----ccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCC-----
Q 001971 744 -----VSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP----- 813 (988)
Q Consensus 744 -----vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~----- 813 (988)
++... ...+..|.||||+|++.|+.++|++||++ |+ ++|..+.
T Consensus 85 ~~~~~i~~~~---~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~~~~~~~~ 137 (273)
T 2pnn_A 85 SLKQFVNASY---TDSYYKGQTALHIAIERRNMTLVTLLVEN-------GA-----------------DVQAAANGDFFK 137 (273)
T ss_dssp CHHHHHTCCC---CSTTTTTCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCBCSGGGS
T ss_pred chhHHhhccc---ccccCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----------------CcCccccccccc
Confidence 11111 01234688999999999999999999999 66 4555554
Q ss_pred ---------CCChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCCCCCCCHHHHHHHcCC---------HHHHH
Q 001971 814 ---------AGLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARDSSGSTPEDYARLRGH---------YSYIH 872 (988)
Q Consensus 814 ---------~G~TPLHiAA~~~G~~eVV~lLL~---~p~~vg~gAdvnarD~~G~TPLh~A~~rGh---------~evve 872 (988)
.|.||||+|+. .|+.++|++|++ + |++++.+|..|.||||+|+..|+ .++++
T Consensus 138 ~~~~~~~~~~g~tpL~~A~~-~g~~~~v~~Ll~~~~~------gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~ 210 (273)
T 2pnn_A 138 KTKGRPGFYFGELPLSLAAC-TNQLAIVKFLLQNSWQ------PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYN 210 (273)
T ss_dssp SCSSSCCCCSCBSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred cccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccC------CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHH
Confidence 79999999999 999999999999 7 99999999999999999999998 89999
Q ss_pred HHHHhhhcCC
Q 001971 873 LVQKKINKRP 882 (988)
Q Consensus 873 LL~~k~ak~~ 882 (988)
+|.+++++..
T Consensus 211 ~Ll~~ga~~n 220 (273)
T 2pnn_A 211 EILILGAKLH 220 (273)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHhhhhcc
Confidence 9999988754
No 60
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.80 E-value=5.8e-19 Score=183.88 Aligned_cols=159 Identities=15% Similarity=0.009 Sum_probs=132.9
Q ss_pred cCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCC
Q 001971 672 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 672 ~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
+|.+++|.+| .+.+..+.||+.++......+ ....++||+|+..|+.++|+.|++..++.+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------- 63 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIIT-----------ADHVSPLHEACLGGHLSCVKILLKHGAQVN------- 63 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSSCCC-----------TTCCCHHHHHHHHTCHHHHHHHHHTTCCTT-------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC-----------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCC-------
Confidence 4678999999 688899999998774322222 235789999999999999999999654321
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
..+..|.||||+|+..|+.++|++|+++ |+ +++. +..|.||||+|+. .|+.+
T Consensus 64 --~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~-~~~g~t~L~~A~~-~~~~~ 115 (261)
T 2xai_A 64 --GVTADWHTPLFNACVSGSWDCVNLLLQH-------GA-----------------SVQP-ESDLASPIHEAAR-RGHVE 115 (261)
T ss_dssp --CCCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CSSC-SCTTCCHHHHHHH-TTCHH
T ss_pred --CCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC-----------------CCCC-CCCCCCHHHHHHH-cCcHH
Confidence 1245688999999999999999999999 66 5553 4469999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 831 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
++++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 116 ~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 161 (261)
T 2xai_A 116 CVNSLIAY------GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN 161 (261)
T ss_dssp HHHHHHHT------TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT
T ss_pred HHHHHHHc------CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 99999999 99999999999999999999999999999999987653
No 61
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.80 E-value=6e-19 Score=177.01 Aligned_cols=185 Identities=16% Similarity=0.075 Sum_probs=119.6
Q ss_pred hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCC
Q 001971 670 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 748 (988)
Q Consensus 670 ~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~ 748 (988)
++.+.++++.+| .+.+..+.||++++......+ ....++||+|+..++.++|+.|++...+....
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~-----------~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--- 71 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPD-----------KENVTLLHWAAINNRIDLVKYYISKGAIVDQL--- 71 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC---
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCC-----------CCCCCHHHHHHHhCCHHHHHHHHHcCCcchhh---
Confidence 345678899988 588889999998774322221 23578999999999999999999976432211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccc----------cccCCccCCCCCChH
Q 001971 749 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKG----------FLFRPDVIGPAGLTP 818 (988)
Q Consensus 749 ~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~----------y~fdpN~~d~~G~TP 818 (988)
....|.||||+|+..|+.++|++|++++.+.... ...+.++++.+...+ ...+++..+..|.||
T Consensus 72 -----~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~ 145 (240)
T 3eu9_A 72 -----GGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLI-DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTP 145 (240)
T ss_dssp -----BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred -----cCCcCCChhHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcH
Confidence 1234789999999999999999999983221000 000112333322211 113556666666666
Q ss_pred HHHHHhhCCCHHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 001971 819 IHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINK 880 (988)
Q Consensus 819 LHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~-~G~TPLh~A~~rGh~evveLL~~k~ak 880 (988)
||+|+...+..+++++|++. +++++..|. .|.||||+|+..|+.+++++|.+++++
T Consensus 146 l~~a~~~~~~~~~~~~L~~~------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 202 (240)
T 3eu9_A 146 LMWAAYRTHSVDPTRLLLTF------NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN 202 (240)
T ss_dssp HHHHHHHCCSSTTHHHHHHT------TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred HHHHHHhCChHHHHHHHHhc------CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 66666523335666666666 666666665 677777777777777777777666554
No 62
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.79 E-value=5.7e-19 Score=171.37 Aligned_cols=127 Identities=17% Similarity=0.107 Sum_probs=112.2
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
.++||+|+..|+.++++.||+...+ .....+..|.||||+|++.|+.++|++||++ |+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~--------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------- 60 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDN--------LVNKPDERGFTPLIWASAFGEIETVRFLLEW-------GA------- 60 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSG--------GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------TC-------
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcc--------cccCCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-------
Confidence 4589999999999999999985321 0111245688999999999999999999999 77
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK 876 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~ 876 (988)
++|..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.+
T Consensus 61 ----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 123 (172)
T 3v30_A 61 ----------DPHILAKERESALSLAST-GGYTDIVGLLLER------DVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123 (172)
T ss_dssp ----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred ----------CchhhcccCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 889999999999999999 9999999999999 99999999999999999999999999999999
Q ss_pred hhhcCC
Q 001971 877 KINKRP 882 (988)
Q Consensus 877 k~ak~~ 882 (988)
++++..
T Consensus 124 ~ga~~~ 129 (172)
T 3v30_A 124 RGADLT 129 (172)
T ss_dssp TTCCTT
T ss_pred cCCCcc
Confidence 876543
No 63
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.79 E-value=1.6e-19 Score=186.45 Aligned_cols=159 Identities=17% Similarity=0.078 Sum_probs=114.2
Q ss_pred cCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCC
Q 001971 672 FGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 672 ~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
.|.+++|.++ .+....+..++.++..... . ....++||+|+..|+.++|+.||+..++.+ .
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-----------~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~----~-- 65 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-----------N-PLPLALLLDSSLEGEFDLVQRIIYEVDDPS----L-- 65 (239)
T ss_dssp ---------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCC----C--
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-----------C-chhhHHHHHHHHcCCHHHHHHHHHcCCCCC----C--
Confidence 4678888888 5666677777776632111 0 124689999999999999999998654221 1
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
.+..|.||||+|+..|+.++|++||++ |+ ++|.+|..|+||||+|+. .|+.+
T Consensus 66 ---~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~d~~g~tpL~~A~~-~~~~~ 117 (239)
T 1ycs_B 66 ---PNDEGITALHNAVCAGHTEIVKFLVQF-------GV-----------------NVNAADSDGWTPLHCAAS-CNNVQ 117 (239)
T ss_dssp ---CCTTSCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHH
T ss_pred ---cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHH
Confidence 245688999999999999999999999 77 899999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCC-CHHHHH--HHcCCHHHHHHHHHhhhcCC
Q 001971 831 VLDALTDDPGMVGIEAWKNARDSSGS-TPEDYA--RLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvnarD~~G~-TPLh~A--~~rGh~evveLL~~k~ak~~ 882 (988)
+|++|+++ |++++.+|..|. ||||+| +..||.+++++|..++++..
T Consensus 118 ~v~~Ll~~------ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 118 VCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp HHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHc------CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 99999999 999999998887 999999 78899999999999988765
No 64
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.79 E-value=3e-19 Score=193.70 Aligned_cols=199 Identities=14% Similarity=0.064 Sum_probs=163.8
Q ss_pred CCcceeecchhhhhHHHHHHHHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCcccccc
Q 001971 638 TFFPFIVAEEDVCSEIRMLESALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRF 716 (988)
Q Consensus 638 ~ffP~LVad~~iCsEI~~LE~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~ 716 (988)
+..|+++|... +.+..++.+++.++.....+..|.+++|.+| .+.+..+.+|+.++... .....
T Consensus 20 g~t~L~~Aa~~--g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-------------~~~~g 84 (364)
T 3ljn_A 20 NMEKIHVAARK--GQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH-------------SLWHG 84 (364)
T ss_dssp HHHHHHHHHHH--TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-------------CCBTT
T ss_pred CCCHHHHHHHc--CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-------------cccCC
Confidence 36788877654 8888999999998876666778999999999 58889999999887411 11235
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCC------C------CchhhccCCCcHHHHHHHcC--CHHHHHHHhccCC
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE------H------PSLDLALTELGLLHRAVRKN--SRPLVDLLLRFVP 782 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~------~------~~l~~~l~G~TpLH~AVr~g--~~eiVelLL~~~p 782 (988)
.++||+|+..|+.++|+.||+...+.+.+... . .....+..|.||||+|+..| +.++|++||++
T Consensus 85 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-- 162 (364)
T 3ljn_A 85 QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-- 162 (364)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH--
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc--
Confidence 78999999999999999999974321111000 0 00013456889999999999 99999999999
Q ss_pred CccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccc-----cccCCCCCCC
Q 001971 783 LEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAW-----KNARDSSGST 857 (988)
Q Consensus 783 ~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAd-----vnarD~~G~T 857 (988)
|+ ++|..|..|.||||+|+. .|+.++|++|+++ +++ ++.+|..|.|
T Consensus 163 -----ga-----------------~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~------g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 163 -----GA-----------------SPTAKDKADETPLMRAME-FRNREALDLMMDT------VPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp -----TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHH------CSCSSSCCTTCCCTTCCC
T ss_pred -----CC-----------------CCcccCCCCCCHHHHHHH-cCCHHHHHHHHhc------ccccccccccccCCCCCc
Confidence 77 899999999999999999 9999999999998 888 9999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 858 PEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 858 PLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
|||+|+..||.+++++|.+++++..
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999987653
No 65
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.79 E-value=1.3e-18 Score=174.90 Aligned_cols=161 Identities=16% Similarity=0.077 Sum_probs=132.0
Q ss_pred CCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCc
Q 001971 673 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPS 751 (988)
Q Consensus 673 g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~ 751 (988)
|.+++|.+| .+.+..+.+++++...... ..-....++||+|+..|+.++++.|++...+.++.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~----------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~------ 65 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLL----------QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD------ 65 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTT----------CCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGG------
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccc----------cCCCCCCCHHHHHHHcCCHHHHHHHHhcccccccc------
Confidence 457888888 5778888888887632111 11123578999999999999999999965322211
Q ss_pred hhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHH
Q 001971 752 LDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDV 831 (988)
Q Consensus 752 l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eV 831 (988)
...+..|.||||+|+..|+.++|++|+++ |.. .+++..+..|.||||+|+. .|+.++
T Consensus 66 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~~---------------~~~~~~~~~g~t~L~~A~~-~~~~~~ 122 (228)
T 2dzn_A 66 DYPDDSGWTPFHIACSVGNLEVVKSLYDR-------PLK---------------PDLNKITNQGVTCLHLAVG-KKWFEV 122 (228)
T ss_dssp GCCCTTSCCHHHHHHHHCCHHHHHHHHSS-------SSC---------------CCTTCCCTTCCCHHHHHHH-TTCHHH
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHhC-------CCC---------------cccccCCcCCCCHHHHHHH-cCCHhH
Confidence 01245688999999999999999999998 520 1788899999999999999 999999
Q ss_pred HHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 001971 832 LDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKI 878 (988)
Q Consensus 832 V~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ 878 (988)
+++|+++ |++++.+|..|.||||+|+..|+.+++++|.+++
T Consensus 123 ~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 163 (228)
T 2dzn_A 123 SQFLIEN------GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163 (228)
T ss_dssp HHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTT
T ss_pred HHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 9999999 9999999999999999999999999999999987
No 66
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.79 E-value=5.1e-19 Score=175.09 Aligned_cols=127 Identities=17% Similarity=0.046 Sum_probs=114.4
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
.+++||+|+..|+.++++.|++...+.+. .+..|.||||+|++.|+.++|++|+++ |+
T Consensus 35 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 92 (192)
T 2rfm_A 35 NRTPLMVACMLGMENAIDKLVENFDKLED---------KDIEGSTALIWAVKNNRLGIAEKLLSK-------GS------ 92 (192)
T ss_dssp CCCHHHHHHHHTCGGGHHHHHHHHCCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHH-------TC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcccccc---------ccccCccHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 47899999999999999999997543211 244588999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 93 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 154 (192)
T 2rfm_A 93 -----------NVNTKDFSGKTPLMWSII-FGYSEMSYFLLEH------GANVNDRNLEGETPLIVASKYGRSEIVKKLL 154 (192)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred -----------CCCCCCCCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 789999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 001971 876 KKINKRP 882 (988)
Q Consensus 876 ~k~ak~~ 882 (988)
+++++..
T Consensus 155 ~~ga~~~ 161 (192)
T 2rfm_A 155 ELGADIS 161 (192)
T ss_dssp HTTCCTT
T ss_pred HCCCCCC
Confidence 9876643
No 67
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.79 E-value=1.3e-18 Score=186.88 Aligned_cols=173 Identities=17% Similarity=0.102 Sum_probs=101.0
Q ss_pred hhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhh-hccccccC
Q 001971 669 VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHI-LLDGTVSL 746 (988)
Q Consensus 669 ~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~-l~dg~vd~ 746 (988)
.+..|.+++|.++ .+.+..+.+++.++........... ..........+|||+|+..|+.++|++||+. .++.+
T Consensus 121 ~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~-~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n--- 196 (337)
T 4g8k_A 121 CDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE-DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN--- 196 (337)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC------CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTT---
T ss_pred hccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccc-ccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcC---
Confidence 3456889999988 4777788888887754332221110 0112223467899999999999999999963 23211
Q ss_pred CCCCchhhccCCCcHHHHHHHcCC----HHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHH
Q 001971 747 GEHPSLDLALTELGLLHRAVRKNS----RPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIA 822 (988)
Q Consensus 747 g~~~~l~~~l~G~TpLH~AVr~g~----~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiA 822 (988)
. .+..|.|+||.++..++ ..++++||++ |+ ++|.+|..|+||||+|
T Consensus 197 -~-----~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-------ga-----------------d~n~~d~~g~t~L~~a 246 (337)
T 4g8k_A 197 -A-----CDNMGRNALIHALLSSDDSDVEAITHLLLDH-------GA-----------------DVNVRGERGKTPLILA 246 (337)
T ss_dssp -C-----CCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-------TC-----------------CTTCCCGGGCCHHHHH
T ss_pred -c-----cCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-------CC-----------------CCCCcCCCCCCHHHHH
Confidence 1 12335566655554332 2455666665 55 5555555555555555
Q ss_pred HhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 001971 823 AGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 823 A~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~ 881 (988)
+. .|+.++|++|++.. ++++|++|.+|+||||+|+..||.++|++|++++++.
T Consensus 247 ~~-~~~~~~v~~Ll~~~-----~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 247 VE-KKHLGLVQRLLEQE-----HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp HH-TTCHHHHHHHHTST-----TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSS
T ss_pred HH-hhhhHHHHHHHHhc-----CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 55 55555555555432 4555555555555555555555555555555555543
No 68
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.79 E-value=1.3e-18 Score=171.83 Aligned_cols=161 Identities=11% Similarity=-0.002 Sum_probs=133.4
Q ss_pred cCCcccHHHH-HHHHHHHhHhhccccc-ccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCC
Q 001971 672 FGKIDTKNQA-MDFIHEIGWLFHRSQS-KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEH 749 (988)
Q Consensus 672 ~g~~~lh~~a-m~fL~EIGWLLqr~~~-~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~ 749 (988)
.+.+++|.+| .+.+..+.++|.+... .... -....++||+|+..++.++|+.|++..++.+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-----------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~----- 67 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEV-----------DTEGNTPLNIAVHNNDIEIAKALIDRGADINL----- 67 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC-----------CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-----
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCC-----------CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-----
Confidence 4567888888 5888888888877631 1111 12357899999999999999999996543221
Q ss_pred CchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCH
Q 001971 750 PSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSE 829 (988)
Q Consensus 750 ~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~ 829 (988)
.+..|.||||+|+..|+.++|++|++.. ++ +++..+..|.||||+|+. .|+.
T Consensus 68 ----~~~~g~t~l~~A~~~~~~~~~~~Ll~~~------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~ 119 (201)
T 3hra_A 68 ----QNSISDSPYLYAGAQGRTEILAYMLKHA------TP-----------------DLNKHNRYGGNALIPAAE-KGHI 119 (201)
T ss_dssp ----CCTTSCCHHHHHHHTTCHHHHHHHHHHS------CC-----------------CTTCCCTTSCCSHHHHHH-TTCH
T ss_pred ----CCCCCCCHHHHHHHcCCHHHHHHHHhcc------Cc-----------------ccccccCCCCcHHHHHHH-cCCH
Confidence 2445889999999999999999999652 44 788999999999999999 9999
Q ss_pred HHHHHhhcCCCCCccc-cccccCCCCCCCHHHHHHHcCC-----HHHHHHHHHhhhcCC
Q 001971 830 DVLDALTDDPGMVGIE-AWKNARDSSGSTPEDYARLRGH-----YSYIHLVQKKINKRP 882 (988)
Q Consensus 830 eVV~lLL~~p~~vg~g-AdvnarD~~G~TPLh~A~~rGh-----~evveLL~~k~ak~~ 882 (988)
+++++|+++ + ++++.+|..|.||||+|+..++ .+++++|.+++++..
T Consensus 120 ~~v~~Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 120 DNVKLLLED------GREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp HHHHHHHHH------CCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHc------CCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCC
Confidence 999999999 7 9999999999999999999988 999999999987643
No 69
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.79 E-value=1.1e-18 Score=169.89 Aligned_cols=126 Identities=22% Similarity=0.216 Sum_probs=113.7
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++|+.|+..|+.++|+.|++..++.+ ..+..|.||||+|++.|+.++|++||++ |+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 71 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANGADVN---------AEDASGWTPLHLAAFNGHLEIVEVLLKN-------GA------ 71 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCCCCCC---------CCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 4679999999999999999999654321 1244688999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 72 -----------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 133 (169)
T 2y1l_E 72 -----------DVNAVDHAGMTPLRLAAL-FGHLEIVEVLLKN------GADVNANDMEGHTPLHLAAMFGHLEIVEVLL 133 (169)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 789999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 001971 876 KKINKR 881 (988)
Q Consensus 876 ~k~ak~ 881 (988)
+++++.
T Consensus 134 ~~g~~~ 139 (169)
T 2y1l_E 134 KNGADV 139 (169)
T ss_dssp HTTCCT
T ss_pred HcCCCC
Confidence 987654
No 70
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.79 E-value=1.8e-18 Score=183.19 Aligned_cols=206 Identities=16% Similarity=0.057 Sum_probs=149.9
Q ss_pred ceeecchhhhhHHHHHHHHhhh-cCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccch
Q 001971 641 PFIVAEEDVCSEIRMLESALEF-NRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKW 718 (988)
Q Consensus 641 P~LVad~~iCsEI~~LE~~le~-~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~ 718 (988)
|++.|. ..+.+..++.++.. +......+..|.+++|.+| .+.+..+.||++++......+ ....+
T Consensus 27 ~L~~A~--~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t 93 (351)
T 3utm_A 27 ELLEAA--RSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKD-----------KGGLV 93 (351)
T ss_dssp HHHHHH--HHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC-----------TTCCC
T ss_pred hHHHHH--HcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC-----------CCCCc
Confidence 444433 34677777777764 2232233567899999999 588999999998874322222 23578
Q ss_pred HHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc----
Q 001971 719 LIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK---- 794 (988)
Q Consensus 719 lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~---- 794 (988)
|||+|+..|+.++|+.|++..++.+. .+..|.||||+|++.|+.++|++||++ |+++...
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~~~~~~~~g 157 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKHGACVNA---------MDLWQFTPLHEAASKNRVEVCSLLLSH-------GADPTLVNCHG 157 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC---------CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TCCTTCCCTTS
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCCCccccCCC
Confidence 99999999999999999996543211 244588999999999999999999998 4422211
Q ss_pred --cccccccc---------------------c----------cccCCccCCCCCChHHHHHHhhC---CCHHHHHHhhcC
Q 001971 795 --ALVDGVHK---------------------G----------FLFRPDVIGPAGLTPIHIAAGKD---GSEDVLDALTDD 838 (988)
Q Consensus 795 --~l~~~s~~---------------------~----------y~fdpN~~d~~G~TPLHiAA~~~---G~~eVV~lLL~~ 838 (988)
++...... . ........+..|.||||+|+. . +..+++++|+++
T Consensus 158 ~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~-~~~~~~~~~~~~Ll~~ 236 (351)
T 3utm_A 158 KSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVA-SLHPKRKQVAELLLRK 236 (351)
T ss_dssp CCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHH-CCSTTHHHHHHHHHHT
T ss_pred CcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHH-HhCccHHHHHHHHHHc
Confidence 11100000 0 000112355789999999999 7 557999999999
Q ss_pred CCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 839 PGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 839 p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
|++++.+|..|.||||+|+.+|+.+++++|.+++++..
T Consensus 237 ------g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n 274 (351)
T 3utm_A 237 ------GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN 274 (351)
T ss_dssp ------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ------CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99999999999999999999999999999999987643
No 71
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.79 E-value=2.4e-19 Score=182.68 Aligned_cols=172 Identities=14% Similarity=-0.001 Sum_probs=132.2
Q ss_pred hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCC
Q 001971 670 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 748 (988)
Q Consensus 670 ~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~ 748 (988)
+..|.+++|.+| .+.+..+.+|+...... ..+ ++ ..-....+|||+|+..++.++|+.||+..++.+.
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~----~~~--~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---- 73 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGD----LAF--LN-FQNNLQQTPLHLAVITNQPEIAEALLGAGCDPEL---- 73 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC---------CCC--CC-CCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCC----
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhcc----HHH--hh-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC----
Confidence 457899999999 46666677776654210 000 00 1222467899999999999999999986443211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCC
Q 001971 749 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS 828 (988)
Q Consensus 749 ~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~ 828 (988)
.+..|.||||+|++.|+.++|++|++. |+.+ .+....+..+..|.||||+|+. .|+
T Consensus 74 -----~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------~~~~-----------~~~~~~~~~~~~g~t~L~~A~~-~~~ 129 (236)
T 1ikn_D 74 -----RDFRGNTPLHLACEQGCLASVGVLTQS-------CTTP-----------HLHSILKATNYNGHTCLHLASI-HGY 129 (236)
T ss_dssp -----CCTTCCCHHHHHHHHTCHHHHHHHHHS-------TTTT-----------SSSCGGGCCCTTCCCHHHHHHH-TTC
T ss_pred -----cCCCCCCHHHHHHHcCCHHHHHHHHhc-------ccch-----------hHHHHhhccCCCCCCHHHHHHH-cCC
Confidence 244688999999999999999999998 4310 1111357788899999999999 999
Q ss_pred HHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 829 EDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 829 ~eVV~lLL~~p~~vg~gAdvnarD~-~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
.++|++|+++ |++++.+|. .|.||||+|+..|+.+++++|.+++++..
T Consensus 130 ~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 130 LGIVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp HHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSC
T ss_pred HHHHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999 999999998 99999999999999999999999987643
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.79 E-value=6.8e-19 Score=170.05 Aligned_cols=126 Identities=16% Similarity=0.149 Sum_probs=113.1
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||+|+..|+.++++.|++...+ ++ ..+..|.||||+|++.|+.++|++||++ |+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~--~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 60 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENV--IN-------HTDEEGFTPLMWAAAHGQIAVVEFLLQN-------GA------ 60 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSC--TT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCC--cC-------CCCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC------
Confidence 36799999999999999999986432 11 1244688999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..+..|.||||+|+. .|+.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|.
T Consensus 61 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 122 (167)
T 3v31_A 61 -----------DPQLLGKGRESALSLACS-KGYTDIVKMLLDC------GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLL 122 (167)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCcHHHHHHH-cCCHHHHHHHHHC------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 789999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 001971 876 KKINKR 881 (988)
Q Consensus 876 ~k~ak~ 881 (988)
+++++.
T Consensus 123 ~~g~~~ 128 (167)
T 3v31_A 123 ESGADP 128 (167)
T ss_dssp HTTCCT
T ss_pred HcCCCC
Confidence 987654
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.78 E-value=8.6e-19 Score=171.90 Aligned_cols=127 Identities=23% Similarity=0.208 Sum_probs=112.0
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
+.++|+.|+..|+.++|+.||+... .+.. ..+..|.||||+|++.|+.++|++||+. |+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~---~~~~-----~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 63 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTE---NDLN-----QGDDHGFSPLHWACREGRSAVVEMLIMR-------GA------ 63 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTT---SCTT-----CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCc---cccc-----ccCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC------
Confidence 3568999999999999999998421 1111 1345688999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..|..|.||||+|+. .|+.++|++|+++ |++++.+|..|.||||+|+..|+.+++++|.
T Consensus 64 -----------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 125 (179)
T 3f6q_A 64 -----------RINVMNRGDDTPLHLAAS-HGHRDIVQKLLQY------KADINAVNEHGNVPLHYACFWGQDQVAEDLV 125 (179)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcC
Q 001971 876 KKINKR 881 (988)
Q Consensus 876 ~k~ak~ 881 (988)
+++++.
T Consensus 126 ~~ga~~ 131 (179)
T 3f6q_A 126 ANGALV 131 (179)
T ss_dssp HTTCCS
T ss_pred HCCCCc
Confidence 988764
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.78 E-value=3.9e-19 Score=183.27 Aligned_cols=134 Identities=19% Similarity=0.144 Sum_probs=112.2
Q ss_pred cchHHHHHH---HcCchHHHHHHhhhhcccccc---CCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCcccccc
Q 001971 716 FKWLIEFSM---DHEWCAVVKKLLHILLDGTVS---LGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRL 789 (988)
Q Consensus 716 ~k~lL~~Av---e~g~~aVVk~LL~~l~dg~vd---~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga 789 (988)
.+++||+|+ ..|+.++|+.||+..++.... .+. .....+..|.||||+|+..|+.++|++||++ |+
T Consensus 46 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga 117 (260)
T 3jxi_A 46 GKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS-PFRDVYYRGQTALHIAIERRCKHYVELLVEK-------GA 117 (260)
T ss_dssp CCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC-CBCCSSEESBCHHHHHHHTTCHHHHHHHHHT-------TC
T ss_pred CCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc-cccccccCCCCHHHHHHHcCCHHHHHHHHhC-------CC
Confidence 678999999 779999999999986542210 000 0011233688999999999999999999999 76
Q ss_pred CccccccccccccccccCCccCC--------------CCCChHHHHHHhhCCCHHHHHHhhc---CCCCCccccccccCC
Q 001971 790 GSENKALVDGVHKGFLFRPDVIG--------------PAGLTPIHIAAGKDGSEDVLDALTD---DPGMVGIEAWKNARD 852 (988)
Q Consensus 790 ~~~~~~l~~~s~~~y~fdpN~~d--------------~~G~TPLHiAA~~~G~~eVV~lLL~---~p~~vg~gAdvnarD 852 (988)
++|..+ ..|.||||+||. .|+.++|++|++ + |++++.+|
T Consensus 118 -----------------~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~-~g~~~~v~~Ll~~~~~------ga~~~~~d 173 (260)
T 3jxi_A 118 -----------------DVHAQARGRFFQPKDEGGYFYFGELPLSLAAC-TNQPHIVHYLTENGHK------QADLRRQD 173 (260)
T ss_dssp -----------------CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHH-TTCHHHHHHHHHCSSC------CCCTTCCC
T ss_pred -----------------CcCccccccccCcccccccccCCCCHHHHHHH-cCCHHHHHHHHhcccc------CCCCcccC
Confidence 566665 689999999999 999999999999 7 99999999
Q ss_pred CCCCCHHHHHHHcCC---------HHHHHHHHHhhhcC
Q 001971 853 SSGSTPEDYARLRGH---------YSYIHLVQKKINKR 881 (988)
Q Consensus 853 ~~G~TPLh~A~~rGh---------~evveLL~~k~ak~ 881 (988)
..|.||||+|+..|+ .+++++|.+++++.
T Consensus 174 ~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 174 SRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp TTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 999999999999888 79999999998875
No 75
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.78 E-value=3.9e-19 Score=170.16 Aligned_cols=125 Identities=20% Similarity=0.156 Sum_probs=112.1
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
.+.++|+.|+..|+.++++.||+..++. . ..+..|.||||+|+. |+.++|++|++. |+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~----~-----~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~----- 61 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV----N-----AQNGFGRTALQVMKL-GNPEIARRLLLR-------GA----- 61 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT----T-----CCCTTSCCHHHHCCS-SCHHHHHHHHHT-------TC-----
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc----c-----ccCccCccHHHHHHc-CcHHHHHHHHHc-------CC-----
Confidence 3578999999999999999999854321 1 124458899999999 999999999999 77
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 874 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL 874 (988)
++|..+..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|
T Consensus 62 ------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 122 (162)
T 1ihb_A 62 ------------NPDLKDRTGFAVIHDAAR-AGFLDTLQTLLEF------QADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122 (162)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhhhc
Q 001971 875 QKKINK 880 (988)
Q Consensus 875 ~~k~ak 880 (988)
.+++++
T Consensus 123 l~~g~~ 128 (162)
T 1ihb_A 123 VKHTAS 128 (162)
T ss_dssp HHHSCC
T ss_pred HHccCC
Confidence 999775
No 76
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.78 E-value=1.5e-18 Score=190.97 Aligned_cols=186 Identities=11% Similarity=0.055 Sum_probs=144.5
Q ss_pred HHhhhcCcchhhhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHh
Q 001971 658 SALEFNRTDADVERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLL 736 (988)
Q Consensus 658 ~~le~~a~~~~~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL 736 (988)
.+++.+++....+..|.+++|.+| -+.+..+.||+.++......+ ....++||+|+..|+.++|+.||
T Consensus 151 ~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~-----------~~g~t~L~~A~~~g~~~~v~~Ll 219 (373)
T 2fo1_E 151 ECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYN-----------KSERSALHQAAANRDFGMMVYML 219 (373)
T ss_dssp HHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCC-----------TTCCCHHHHHHHTTCHHHHHHHT
T ss_pred HHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccC-----------CCCCCHHHHHHHCCCHHHHHHHH
Confidence 345677766655678999999999 588889999998875322222 23578999999999999999999
Q ss_pred hhhccccccCCCCCchhhccCCCcHHHHHHHcC---CHHHHHHHhccCCCccccccCccccccccccccccccCCccCCC
Q 001971 737 HILLDGTVSLGEHPSLDLALTELGLLHRAVRKN---SRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGP 813 (988)
Q Consensus 737 ~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g---~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~ 813 (988)
+..... .+.. ..+..|.||||+|+..+ +.++|++|+++ |++... ......+..|.
T Consensus 220 ~~~~~~-~~~~-----~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~-------g~~~~~---------~~~~~~~~~d~ 277 (373)
T 2fo1_E 220 NSTKLK-GDIE-----ELDRNGMTALMIVAHNEGRDQVASAKLLVEK-------GAKVDY---------DGAARKDSEKY 277 (373)
T ss_dssp TSHHHH-HTTS-----CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH-------TCCSSC---------CSGGGTSSSSC
T ss_pred hcCccc-cChh-----hcCCCCCCHHHHHHHhCCcchHHHHHHHHHC-------CCCccc---------ccccccCcccc
Confidence 854100 1111 12456889999999998 89999999999 551100 00012345788
Q ss_pred CCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 814 AGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 814 ~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
.|.||||+||. .|+.++|++|+++. +++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 278 ~g~t~Lh~A~~-~g~~~~v~~Ll~~~-----~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 278 KGRTALHYAAQ-VSNMPIVKYLVGEK-----GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp CCCCTHHHHHS-SCCHHHHHHHHHHS-----CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred cCCCHHHHHHH-hCCHHHHHHHHHhc-----CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 99999999999 99999999999871 49999999999999999999999999999999987643
No 77
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.78 E-value=1.3e-19 Score=170.34 Aligned_cols=126 Identities=25% Similarity=0.220 Sum_probs=108.4
Q ss_pred cccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccc
Q 001971 714 RRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSEN 793 (988)
Q Consensus 714 ~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~ 793 (988)
....++||+|+..|+.++++.||+..++.+ ..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 8 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~---- 67 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIPSVEYLLQNGSDPN---------VKDHAGWTPLHEACNHGHLKVVELLLQH-------KA---- 67 (137)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSC---------CCCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---------cCCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC----
Confidence 346889999999999999999999644321 1244688999999999999999999999 77
Q ss_pred cccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 001971 794 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 873 (988)
Q Consensus 794 ~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveL 873 (988)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..++.+++++
T Consensus 68 -------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~l~~ 127 (137)
T 3c5r_A 68 -------------LVNTTGYQNDSPLHDAAK-NGHVDIVKLLLSY------GASRNAVNIFGLRPVDYTDDESMKSLLLL 127 (137)
T ss_dssp -------------CTTCCCGGGCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCGGGGCCCHHHHHHHSC
T ss_pred -------------cccCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHhhccHHHHHhh
Confidence 789999999999999999 9999999999999 99999999999999999999999998888
Q ss_pred HHHhhh
Q 001971 874 VQKKIN 879 (988)
Q Consensus 874 L~~k~a 879 (988)
|.+...
T Consensus 128 l~~~~~ 133 (137)
T 3c5r_A 128 PEKNES 133 (137)
T ss_dssp C-----
T ss_pred cccccc
Confidence 876643
No 78
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=1.1e-18 Score=154.42 Aligned_cols=92 Identities=30% Similarity=0.373 Sum_probs=87.5
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 001971 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (988)
Q Consensus 758 G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~ 837 (988)
|+||||+|++.|+.++|++||+. |+ ++|.+|..|.||||+|+. .|+.+++++|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~n~~d~~g~t~L~~A~~-~~~~~~v~~Ll~ 56 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA-------GA-----------------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLE 56 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCcccCCCCCCHHHHHHH-cCCHHHHHHHHH
Confidence 78999999999999999999999 77 889999999999999999 999999999999
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhc
Q 001971 838 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINK 880 (988)
Q Consensus 838 ~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak 880 (988)
+ |++++.+|..|.||||+|+..|+.+++++|.+++++
T Consensus 57 ~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 57 A------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp T------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred c------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9 999999999999999999999999999999998763
No 79
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.77 E-value=3.2e-18 Score=182.81 Aligned_cols=140 Identities=22% Similarity=0.162 Sum_probs=119.0
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSEN 793 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~---g~~eiVelLL~~~p~~~~~Ga~~~~ 793 (988)
-..|+.|+..+....++.|+...++..... .....+..|.||||+|++. |+.++|++||++ |+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~---~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-------ga---- 196 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKI---PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-------SG---- 196 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBC---CCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-------CS----
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhc---cccccccCCCCcchHHHHhcccchHHHHHHHHHC-------CC----
Confidence 468999999999999999998655422110 0001244588999999999 899999999999 88
Q ss_pred cccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 001971 794 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 873 (988)
Q Consensus 794 ~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveL 873 (988)
++|.+|..|+||||+||. .|+.++|++|+++ ||+++++|..|.||||+|+..||.+++++
T Consensus 197 -------------~in~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~ 256 (278)
T 1dcq_A 197 -------------NLDKQTGKGSTALHYCCL-TDNAECLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEEL 256 (278)
T ss_dssp -------------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred -------------CccccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCccCCCCCHHHHHHHcCCHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcCCCCCceeeee
Q 001971 874 VQKKINKRPNGGHVVVDI 891 (988)
Q Consensus 874 L~~k~ak~~~~~~v~v~i 891 (988)
|.++++++. +.|..+.+
T Consensus 257 Ll~~ga~~~-~~~~~v~~ 273 (278)
T 1dcq_A 257 LTQALSGRF-NSHVHVEY 273 (278)
T ss_dssp HHHHHTTCC-CSSCCCCC
T ss_pred HHHcCCCCC-Ccceeeec
Confidence 999998765 55555543
No 80
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.77 E-value=1.6e-18 Score=160.30 Aligned_cols=116 Identities=16% Similarity=0.067 Sum_probs=101.2
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||+|+..|+.++++.|++...+.+ ..+..|.||||+|+..|+.++|++||++ |+
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~------ 64 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDVN---------RTLEGGRKPLHYAADCGQLEILEFLLLK-------GA------ 64 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTT---------SCCTTSSCHHHHHHHTTCHHHHHHHHTT-------TC------
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcC---------ccCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 4789999999999999999999643211 1244688999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 874 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL 874 (988)
++|.+|..|.||||+|+. .|+.++|++|+++ |++++.+|..|.||||+|. +.++.++|
T Consensus 65 -----------~~~~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 65 -----------DINAPDKHHITPLLSAVY-EGHVSCVKLLLSK------GADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred -----------CCCcCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 889999999999999999 9999999999999 9999999999999999994 45555554
No 81
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.77 E-value=2.1e-18 Score=164.42 Aligned_cols=123 Identities=24% Similarity=0.229 Sum_probs=109.7
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
|..++|++|+..|+.++++.||+. .. .+.. ..+..|.||||+ +..|+.++|++|+++ |+
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~-~~--~~~~-----~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-------g~----- 59 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHR-EL--VHPD-----ALNRFGKTALQV-MMFGSTAIALELLKQ-------GA----- 59 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHT-TC--CCTT-----CCCTTSCCHHHH-SCTTCHHHHHHHHHT-------TC-----
T ss_pred CcchHHHHHHHhCCHHHHHHHHHh-hC--cCcc-----ccCCCCCcHHHH-HHcCCHHHHHHHHHC-------CC-----
Confidence 346899999999999999999985 21 1111 124458899999 999999999999999 77
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 874 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL 874 (988)
++|..|..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..|+.+++++|
T Consensus 60 ------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 120 (156)
T 1bd8_A 60 ------------SPNVQDTSGTSPVHDAAR-TGFLDTLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFL 120 (156)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ------------CCCCcCCCCCCHHHHHHH-cCcHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHhChHHHHHHH
Confidence 889999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHh
Q 001971 875 QKK 877 (988)
Q Consensus 875 ~~k 877 (988)
.++
T Consensus 121 l~~ 123 (156)
T 1bd8_A 121 AAE 123 (156)
T ss_dssp HTT
T ss_pred Hhc
Confidence 987
No 82
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=2.1e-18 Score=183.11 Aligned_cols=158 Identities=16% Similarity=0.073 Sum_probs=134.5
Q ss_pred hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCC
Q 001971 670 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 748 (988)
Q Consensus 670 ~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~ 748 (988)
+..|.+++|.+| .+.+..+.+|+.++...... ...+|||+|+..|+.++|+.|++..++.+.
T Consensus 28 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~-------------~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~---- 90 (285)
T 3kea_A 28 DVHGHSASYYAIADNNVRLVCTLLNAGALKNLL-------------ENEFPLHQAATLEDTKIVKILLFSGLDDSQ---- 90 (285)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC-------------TTCCHHHHHTTSSSCHHHHHHHHTTCCTTC----
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC-------------CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC----
Confidence 567899999999 58888999999887422111 147899999999999999999996543211
Q ss_pred CCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCC-ChHHHHHHhhCC
Q 001971 749 HPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAG-LTPIHIAAGKDG 827 (988)
Q Consensus 749 ~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G-~TPLHiAA~~~G 827 (988)
.+..|.||||+|+..|+.++|++||++ |+ ++|..+..| .||||+|+. .|
T Consensus 91 -----~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~~~~g~~t~L~~A~~-~~ 140 (285)
T 3kea_A 91 -----FDDKGNTALYYAVDSGNMQTVKLFVKK-------NW-----------------RLMFYGKTGWKTSFYHAVM-LN 140 (285)
T ss_dssp -----CCTTSCCHHHHHHHTTCHHHHHHHHHH-------CG-----------------GGGGCSSSGGGSHHHHHHH-TT
T ss_pred -----cCCCCCcHHHHHHHcCCHHHHHHHHhc-------CC-----------------CCCccCCCCCCCHHHHHHH-cC
Confidence 244688999999999999999999999 77 889999999 899999999 99
Q ss_pred CHHHHHHhhcCCCCCccccccccCCC-CCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 828 SEDVLDALTDDPGMVGIEAWKNARDS-SGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 828 ~~eVV~lLL~~p~~vg~gAdvnarD~-~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
+.+++++|+++ ++++ .|. .|.||||+|+..|+.+++++|.+++++..
T Consensus 141 ~~~~v~~Ll~~------g~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n 188 (285)
T 3kea_A 141 DVSIVSYFLSE------IPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTN 188 (285)
T ss_dssp CHHHHHHHHTT------SCTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHhC------CCcc--ccccCCccHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 99999999999 7766 343 89999999999999999999999988754
No 83
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.75 E-value=2.9e-18 Score=169.74 Aligned_cols=110 Identities=24% Similarity=0.145 Sum_probs=98.1
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
...++||+|+..|+.++++.||+ ..+ ++ . .+..|.||||+|+..|+.++|++||++ |+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~--~~--~-----~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga----- 100 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRD--VD--A-----VDENGRTALLFVAGLGSDKCVRLLAEA-------GA----- 100 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSC--TT--C-----CCTTSCCHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCC--CC--C-----cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 45789999999999999999998 322 22 1 244688999999999999999999999 77
Q ss_pred ccccccccccccCCccCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 001971 795 ALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 865 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d-~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~r 865 (988)
++|..+ ..|.||||+|+. .|+.+++++|+++ |++++.+|..|.||||+|+..
T Consensus 101 ------------~~~~~~~~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 101 ------------DLDHRDMRGGLTALHMAAG-YVRPEVVEALVEL------GADIEVEDERGLTALELAREI 153 (183)
T ss_dssp ------------CTTCCCSSSSCCHHHHHHH-TTCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHH
T ss_pred ------------CCCcCCCCCCCCHHHHHHh-cCcHHHHHHHHHc------CCCCcCCCCCCCCHHHHHHHh
Confidence 788888 899999999999 9999999999999 999999999999999999876
No 84
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.75 E-value=1.8e-18 Score=174.60 Aligned_cols=128 Identities=8% Similarity=-0.069 Sum_probs=110.5
Q ss_pred ccchHHHHHHHcCch----HHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCC------HHHHHHHhccCCCc
Q 001971 715 RFKWLIEFSMDHEWC----AVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS------RPLVDLLLRFVPLE 784 (988)
Q Consensus 715 R~k~lL~~Ave~g~~----aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~------~eiVelLL~~~p~~ 784 (988)
..++|||+|+..++. ++|++||+.+++.+. .+..|+||||+|+..++ .++|++||++
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~---------~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~---- 103 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKS---------RTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK---- 103 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSC---------CCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT----
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCC---------CCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC----
Confidence 357899999999975 489999996554221 24568999999999987 6889999999
Q ss_pred cccccCccccccccccccccccCCccCCCCCC-hHHHHHHhhCCC-----HHHHHHhhc-CCCCCccccccccCCCCCCC
Q 001971 785 VSDRLGSENKALVDGVHKGFLFRPDVIGPAGL-TPIHIAAGKDGS-----EDVLDALTD-DPGMVGIEAWKNARDSSGST 857 (988)
Q Consensus 785 ~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~-TPLHiAA~~~G~-----~eVV~lLL~-~p~~vg~gAdvnarD~~G~T 857 (988)
|+ ++|.+|..|. ||||+|+. .+. .+++++|++ + ||+++.+|..|.|
T Consensus 104 ---Ga-----------------din~~d~~g~ttpLh~A~~-~~~~~~~~~~iv~~Ll~~~------gad~~~~d~~G~T 156 (186)
T 3t8k_A 104 ---GA-----------------DITALYKPYKIVVFKNIFN-YFVDENEMIPLYKLIFSQS------GLQLLIKDKWGLT 156 (186)
T ss_dssp ---TC-----------------CSSSCBGGGTBCTTGGGGG-CCSCHHHHHHHHHHHHTST------TCCTTCCCTTSCC
T ss_pred ---CC-----------------CCCccCCCcCchHHHHHHH-cCCChhhHHHHHHHHHHhc------CCCCcccCCCCCC
Confidence 88 8999999999 99999998 554 469999999 8 9999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 858 PEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 858 PLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
|||+|+..|+.+++++|...+.+..
T Consensus 157 pL~~A~~~~~~~~v~~L~~~~~~~~ 181 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMEDYIKKYN 181 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 9999999999999999998876543
No 85
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.75 E-value=2.5e-18 Score=178.03 Aligned_cols=127 Identities=19% Similarity=0.100 Sum_probs=114.7
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||+|+..|+.++|+.||+..++.+. .+..|.||||+|+..|+.++|++||++ |+
T Consensus 21 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---------~d~~g~tpLh~A~~~g~~~~v~~Ll~~-------ga------ 78 (229)
T 2vge_A 21 PLVLLLDAALTGELEVVQQAVKEMNDPSQ---------PNEEGITALHNAICGANYSIVDFLITA-------GA------ 78 (229)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHSSCTTC---------CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred hhHHHHHHHHcCCHHHHHHHHhcCCCCCC---------CCCCCCCHHHHHHHcCCHHHHHHHHHC-------CC------
Confidence 46799999999999999999996543211 245688999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCC-CCCCCHHHHH--HHcCCHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARD-SSGSTPEDYA--RLRGHYSYIH 872 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD-~~G~TPLh~A--~~rGh~evve 872 (988)
++|..|..|.||||+|+. .|+.++|++|+++ |++++.+| ..|.||||+| +..|+.++++
T Consensus 79 -----------~~n~~d~~g~tpLh~A~~-~g~~~~v~~Ll~~------ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~ 140 (229)
T 2vge_A 79 -----------NVNSPDSHGWTPLHCAAS-CNDTVICMALVQH------GAAIFATTLSDGATAFEKCDPYREGYADCAT 140 (229)
T ss_dssp -----------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHTT------TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHH
T ss_pred -----------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCcccccCCCCCCHHHHHHHHhcChHHHHH
Confidence 899999999999999999 9999999999999 99999997 6999999999 9999999999
Q ss_pred HHHHhhhcCC
Q 001971 873 LVQKKINKRP 882 (988)
Q Consensus 873 LL~~k~ak~~ 882 (988)
+|.+++++..
T Consensus 141 ~Ll~~ga~~~ 150 (229)
T 2vge_A 141 YLADVEQSMG 150 (229)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHcCCCcc
Confidence 9999988764
No 86
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.75 E-value=2.1e-18 Score=177.94 Aligned_cols=126 Identities=16% Similarity=0.062 Sum_probs=90.0
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||.|+..+...+++.||+..++.+. ...++||||.|++.|+.++|++||+. |+
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~----------~~~~~t~L~~A~~~g~~~~v~~Ll~~-------g~------ 61 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKF----------NPLPLALLLDSSLEGEFDLVQRIIYE-------VD------ 61 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTST-------TS------
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCccc----------CchhhHHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 57899999999999999999996543221 23478999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..|..|+||||+||. .|+.++|++|+++ |+++|.+|..|.||||+|+..||.+++++|.
T Consensus 62 -----------~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll 123 (239)
T 1ycs_B 62 -----------DPSLPNDEGITALHNAVC-AGHTEIVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQVCKFLV 123 (239)
T ss_dssp -----------SCCCCCTTSCCHHHHHHH-HTCHHHHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCcCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 889999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred HhhhcCC
Q 001971 876 KKINKRP 882 (988)
Q Consensus 876 ~k~ak~~ 882 (988)
+++++..
T Consensus 124 ~~ga~~~ 130 (239)
T 1ycs_B 124 ESGAAVF 130 (239)
T ss_dssp HTTCCTT
T ss_pred HcCCCcc
Confidence 9988654
No 87
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.74 E-value=1.6e-18 Score=175.56 Aligned_cols=128 Identities=16% Similarity=0.105 Sum_probs=105.8
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
..++||+|+..|+.++|+.||+..++.+ ..+..|.||||+|+..|+.++|++||++. |+
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~------g~------ 131 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVGVN---------GLDKAGSTALYWACHGGHKDIVEMLFTQP------NI------ 131 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCCTT---------CCCTTSCCHHHHHHHTTCHHHHHHHTTST------TC------
T ss_pred cccccccccccCcHHHHHHHHhCCCCcc---------ccCCCCCCHHHHHHHcCCHHHHHHHHcCC------CC------
Confidence 4679999999999999999999544311 12456899999999999999999999872 55
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+..|+.+++++|.
T Consensus 132 -----------~~~~~d~~g~tpL~~A~~-~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~ 193 (222)
T 3ehr_A 132 -----------ELNQQNKLGDTALHAAAW-KGYADIVQLLLAK------GARTDLRNIEKKLAFDMATNAACASLLKKKQ 193 (222)
T ss_dssp -----------CCCCCCTTSCCHHHHHHH-HTCHHHHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHHHHC---
T ss_pred -----------CccccCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCccccCCCCCHHHHhcchhHHHHHHHHh
Confidence 789999999999999999 9999999999999 9999999999999999999999999999998
Q ss_pred HhhhcCC
Q 001971 876 KKINKRP 882 (988)
Q Consensus 876 ~k~ak~~ 882 (988)
.+++...
T Consensus 194 ~~~~~~~ 200 (222)
T 3ehr_A 194 GTDAVRT 200 (222)
T ss_dssp -------
T ss_pred ccchhhh
Confidence 8877543
No 88
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.74 E-value=7.4e-18 Score=178.38 Aligned_cols=159 Identities=19% Similarity=0.132 Sum_probs=128.3
Q ss_pred CCcccHHHH-HHHHHHHhHhhccccc--ccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCC
Q 001971 673 GKIDTKNQA-MDFIHEIGWLFHRSQS--KSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEH 749 (988)
Q Consensus 673 g~~~lh~~a-m~fL~EIGWLLqr~~~--~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~ 749 (988)
.+..+|.++ .+.+..+..++.+... ....+ ....+|||+|+..|+.++|+.||+..+. +..
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d-----------~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~---~~~-- 139 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIAD-----------SNGNTALHYSVSHANFPVVQQLLDSGVC---KVD-- 139 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCC-----------TTSCCHHHHHHHTTCHHHHHHHHHTSCC---CTT--
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCC-----------CCCCCHHHHHHHCCCHHHHHHHHHCCCC---cCC--
Confidence 455667777 4777777777655321 11111 2357899999999999999999996431 111
Q ss_pred CchhhccCCCcHHHHHH-----HcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHh
Q 001971 750 PSLDLALTELGLLHRAV-----RKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAG 824 (988)
Q Consensus 750 ~~l~~~l~G~TpLH~AV-----r~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~ 824 (988)
..+..|.||||+|+ ..++.++|++|++. |+ .++..+..|.||||+||.
T Consensus 140 ---~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~tpLh~A~~ 192 (276)
T 4hbd_A 140 ---KQNRAGYSPIMLTALATLKTQDDIETVLQLFRL-------GN-----------------INAKASQAGQTALMLAVS 192 (276)
T ss_dssp ---CCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHH-------SC-----------------TTCCCTTTCCCHHHHHHH
T ss_pred ---CCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHc-------CC-----------------CccccCCCCCCHHHHHHH
Confidence 13456899999999 77899999999999 66 677888899999999999
Q ss_pred hCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHH-hhhcC
Q 001971 825 KDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQK-KINKR 881 (988)
Q Consensus 825 ~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~-k~ak~ 881 (988)
.|+.++|++|+++ ||++|.+|..|.||||+|+..|+.+++++|.+ ++++.
T Consensus 193 -~g~~~~v~~Ll~~------gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~ 243 (276)
T 4hbd_A 193 -HGRVDVVKALLAC------EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDI 243 (276)
T ss_dssp -TTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCT
T ss_pred -cCCHHHHHHHHhC------CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC
Confidence 9999999999999 99999999999999999999999999999998 66553
No 89
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.74 E-value=5.6e-18 Score=176.19 Aligned_cols=125 Identities=22% Similarity=0.164 Sum_probs=110.4
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
...++||+|+..|+.++|+.||+ ..+ ++ . .+..|.||||+|+..|+.++|++||++ |+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~--~~--~-----~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga----- 101 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRD--VD--A-----VDENGRTALLFVAGLGSDKCVRLLAEA-------GA----- 101 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCC--TT--C-----BCTTSCBHHHHHHHHTCHHHHHHHHHT-------TC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCC--CC--C-----cCCCCCCHHHHHHHCCCHHHHHHHHHc-------CC-----
Confidence 45789999999999999999998 332 11 1 345689999999999999999999999 77
Q ss_pred ccccccccccccCCccCC-CCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHH----------
Q 001971 795 ALVDGVHKGFLFRPDVIG-PAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYAR---------- 863 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d-~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~---------- 863 (988)
++|..+ ..|.||||+|+. .|+.++|++|+++ ||+++.+|..|.||||+|+
T Consensus 102 ------------~~~~~~~~~g~t~L~~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~ 162 (244)
T 3ui2_A 102 ------------DLDHRDMRGGLTALHMAAG-YVRPEVVEALVEL------GADIEVEDERGLTALELAREILKTTPKGN 162 (244)
T ss_dssp ------------CTTCCCSSSCCCHHHHHHH-TTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHHTTCCCSS
T ss_pred ------------CCCcCCCCCCCCHHHHHHH-cCCHHHHHHHHHC------CCCCCCCCCCCCcHHHHHHHHHhccCCCC
Confidence 888888 889999999999 9999999999999 9999999999999999998
Q ss_pred ------HcCCHHHHHHHHHhhhc
Q 001971 864 ------LRGHYSYIHLVQKKINK 880 (988)
Q Consensus 864 ------~rGh~evveLL~~k~ak 880 (988)
..||.+++++|.++..+
T Consensus 163 ~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 163 PMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEE
T ss_pred HHHHHHHcChHHHHHHHHHhccc
Confidence 66899999999987544
No 90
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.73 E-value=2.3e-17 Score=177.04 Aligned_cols=205 Identities=15% Similarity=0.024 Sum_probs=146.9
Q ss_pred cceeecchhhhhHHHHHHHHhhhcCcchhh-hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCC-----------
Q 001971 640 FPFIVAEEDVCSEIRMLESALEFNRTDADV-ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDP----------- 706 (988)
Q Consensus 640 fP~LVad~~iCsEI~~LE~~le~~a~~~~~-~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~----------- 706 (988)
.|++.|.+. +.+..++.+++.|++.... ++.|.+++|.+| .+.+..+.+||+++......+....
T Consensus 27 t~L~~Av~~--g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~ 104 (337)
T 4g8k_A 27 HLLIKAVQN--EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGS 104 (337)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred hHHHHHHHc--CCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhccc
Confidence 455554443 6677777777777654332 235677787777 4666667777766643222211100
Q ss_pred ------------CCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCCC-CchhhccCCCcHHHHHHHcCCHHH
Q 001971 707 ------------NTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEH-PSLDLALTELGLLHRAVRKNSRPL 773 (988)
Q Consensus 707 ------------~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~-~~l~~~l~G~TpLH~AVr~g~~ei 773 (988)
.+. ..-....++|++|+..++.++++.|++..++.+...... .....+..|.||||+|+++|+.++
T Consensus 105 ~~~~~~~~~~~~~~~-~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~ 183 (337)
T 4g8k_A 105 VKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 183 (337)
T ss_dssp HHHHHHHHTTTCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHH
T ss_pred chhhHHhhhccchhh-hhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHH
Confidence 011 122345789999999999999999999776544321111 111234568899999999999999
Q ss_pred HHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCC----HHHHHHhhcCCCCCccccccc
Q 001971 774 VDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS----EDVLDALTDDPGMVGIEAWKN 849 (988)
Q Consensus 774 VelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~----~eVV~lLL~~p~~vg~gAdvn 849 (988)
|++||+.. |+ ++|..|..|.||||.++. .+. ..|+++|+++ ||++|
T Consensus 184 v~~LL~~~------ga-----------------d~n~~d~~g~t~l~~~~~-~~~~~~~~~i~~lLl~~------gad~n 233 (337)
T 4g8k_A 184 LKILLDEM------GA-----------------DVNACDNMGRNALIHALL-SSDDSDVEAITHLLLDH------GADVN 233 (337)
T ss_dssp HHHHHHHS------CC-----------------CTTCCCTTSCCHHHHHHH-HSCTTTHHHHHHHHHHT------TCCTT
T ss_pred HHHHHhcc------CC-----------------CcCccCCCCCcHHHHHHH-HcCcccHHHHHHHHHHC------CCCCC
Confidence 99999641 66 899999999999998876 332 4689999999 99999
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 001971 850 ARDSSGSTPEDYARLRGHYSYIHLVQKK 877 (988)
Q Consensus 850 arD~~G~TPLh~A~~rGh~evveLL~~k 877 (988)
.+|..|.||||+|+..|+.+++++|...
T Consensus 234 ~~d~~g~t~L~~a~~~~~~~~v~~Ll~~ 261 (337)
T 4g8k_A 234 VRGERGKTPLILAVEKKHLGLVQRLLEQ 261 (337)
T ss_dssp CCCGGGCCHHHHHHHTTCHHHHHHHHTS
T ss_pred CcCCCCCCHHHHHHHhhhhHHHHHHHHh
Confidence 9999999999999999999999988764
No 91
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.73 E-value=1e-17 Score=192.23 Aligned_cols=131 Identities=24% Similarity=0.159 Sum_probs=114.0
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHH---cCCHHHHHHHhccCCCccccccCcccc
Q 001971 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVR---KNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 718 ~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr---~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
..|+.|+..|+.++|+.||+.+++.+.... ....+..|.||||+||+ .|+.++|++||++ |+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~---~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-------ga----- 198 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLP---GPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-------GG----- 198 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBC---CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-------SC-----
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCC---CcccccccchHHHHHHHhcccccHHHHHHHHHc-------CC-----
Confidence 579999999999999999997654332111 01124568999999987 9999999999999 88
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLV 874 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL 874 (988)
++|.+|..|+||||+||. .|+.++|++|+++ ||+++++|..|.||||+|+..||.+++++|
T Consensus 199 ------------~vn~~d~~g~TpLh~A~~-~g~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 259 (497)
T 3lvq_E 199 ------------HLDAKAADGNTALHYAAL-YNQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELL 259 (497)
T ss_dssp ------------CTTCCCSSSCCHHHHHTT-TTCHHHHHHHHHT------CCCCSCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred ------------CCCccCCCCCcHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHH
Confidence 899999999999999999 9999999999999 999999999999999999999999999999
Q ss_pred HHhhhcCC
Q 001971 875 QKKINKRP 882 (988)
Q Consensus 875 ~~k~ak~~ 882 (988)
.+++++..
T Consensus 260 l~~ga~~~ 267 (497)
T 3lvq_E 260 EQAQAGTF 267 (497)
T ss_dssp HHTCC---
T ss_pred HHhCCCCC
Confidence 99998875
No 92
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.73 E-value=9.5e-18 Score=181.69 Aligned_cols=184 Identities=15% Similarity=-0.017 Sum_probs=132.9
Q ss_pred hHHHHHHHHhhhcCcchhhh-----------------hcCCcccHHHHHHHHHHHhHhhc-ccccccccCCCCCCCCCcc
Q 001971 651 SEIRMLESALEFNRTDADVE-----------------RFGKIDTKNQAMDFIHEIGWLFH-RSQSKSRLGHLDPNTDLFP 712 (988)
Q Consensus 651 sEI~~LE~~le~~a~~~~~~-----------------~~g~~~lh~~am~fL~EIGWLLq-r~~~~~~~~~~d~~~~l~q 712 (988)
..+..++.+++.+....... .......|.++.+.+.++.-+|- .+..... ..
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~----------~~ 127 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNI----------PV 127 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCCSCS----------CC
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCccc----------cc
Confidence 78888888888776543210 00111124455666666654443 3321111 01
Q ss_pred ccccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCC---HHHHHHHhccCCCcccccc
Q 001971 713 LRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNS---RPLVDLLLRFVPLEVSDRL 789 (988)
Q Consensus 713 i~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~---~eiVelLL~~~p~~~~~Ga 789 (988)
-....+|||+|+..|+.++|++||+..++.+ ..+..|+||||+|+..|+ .++++.||++ +.
T Consensus 128 d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n---------~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~-------~~ 191 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIANLELVKHLVKHGSNRL---------YGDNMGESCLVKAVKSVNNYDSGTFEALLDY-------LY 191 (327)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---------BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHH-------HG
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---------CcCCCCCCHHHHHHHhcccccHHHHHHHHHh-------hh
Confidence 2246889999999999999999999654322 134568999999999998 6888888888 42
Q ss_pred CccccccccccccccccCCccCCCCCChHHHHHHhh---CCCHHHHHHhhcCCCCCcccc--------------------
Q 001971 790 GSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGK---DGSEDVLDALTDDPGMVGIEA-------------------- 846 (988)
Q Consensus 790 ~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~---~G~~eVV~lLL~~p~~vg~gA-------------------- 846 (988)
. ++|.+|..|+||||+|+.. .|+.+++++|++. ++
T Consensus 192 ~----------------~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~------~~~~~~~~~~~~i~~~~~~~g~ 249 (327)
T 1sw6_A 192 P----------------CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDI------LMGWIVKKQNRPIQSGTNEKES 249 (327)
T ss_dssp G----------------GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHH------HHHHHHHGGGCCEEEC------
T ss_pred c----------------cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHH------HHHHHhcccchHHHhhhhcccC
Confidence 1 6889999999999999962 5899999999876 32
Q ss_pred -------------------------ccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 847 -------------------------WKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 847 -------------------------dvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
++|.+|..|+||||+|+..||.+++++|++++++..
T Consensus 250 ~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~ 310 (327)
T 1sw6_A 250 KPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 310 (327)
T ss_dssp ----------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTT
T ss_pred CcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 588999999999999999999999999999988754
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.72 E-value=3.1e-17 Score=177.28 Aligned_cols=131 Identities=24% Similarity=0.183 Sum_probs=114.0
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHc---CCHHHHHHHhccCCCccccccCccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRK---NSRPLVDLLLRFVPLEVSDRLGSEN 793 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~---g~~eiVelLL~~~p~~~~~Ga~~~~ 793 (988)
.++|+.|+..++..+|+.||+..++.+... .....+..|.||||+||+. |+.++|++||++ |+
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~---~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-------ga---- 217 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFANGQDFGQPL---PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-------GG---- 217 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCE---ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-------SS----
T ss_pred HHHHhhhhhccCHHHHHHHHhcCCcccccC---CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-------CC----
Confidence 467999999999999999998654322100 0001245688999999997 899999999999 77
Q ss_pred cccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHH
Q 001971 794 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHL 873 (988)
Q Consensus 794 ~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveL 873 (988)
++|.+|..|.||||+|+. .|+.++|++|+++ ||+++++|..|.||||+|+..|+.+++++
T Consensus 218 -------------dvn~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~~~~~iv~~ 277 (301)
T 2b0o_E 218 -------------HLDAKAADGNTALHYAAL-YNQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEEL 277 (301)
T ss_dssp -------------CTTCCCTTCCCHHHHHHH-TTCHHHHHHHHHT------TCCCSCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred -------------CCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 899999999999999999 9999999999999 99999999999999999999999999999
Q ss_pred HHHhhhcC
Q 001971 874 VQKKINKR 881 (988)
Q Consensus 874 L~~k~ak~ 881 (988)
|++++++.
T Consensus 278 Ll~~ga~~ 285 (301)
T 2b0o_E 278 LEQAQAGT 285 (301)
T ss_dssp HHHHHHHT
T ss_pred HHHhcCCC
Confidence 99999874
No 94
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.71 E-value=7.6e-18 Score=182.47 Aligned_cols=185 Identities=13% Similarity=0.073 Sum_probs=131.9
Q ss_pred HHHHhhhcCcchh-hhhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCc---hH
Q 001971 656 LESALEFNRTDAD-VERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEW---CA 730 (988)
Q Consensus 656 LE~~le~~a~~~~-~~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~---~a 730 (988)
++.+++.+..... .+..|.+++|.+| .+.+..+.+|++++......+ ....+|||+|+..|+ .+
T Consensus 113 ~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d-----------~~g~TpLh~A~~~g~~~~~~ 181 (327)
T 1sw6_A 113 NDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGD-----------NMGESCLVKAVKSVNNYDSG 181 (327)
T ss_dssp HHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCC-----------TTCCCHHHHHHHSSHHHHTT
T ss_pred HHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC-----------CCCCCHHHHHHHhcccccHH
Confidence 3445555565544 4678999999999 588899999999885433332 235789999999998 78
Q ss_pred HHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHH----cCCHHHHHHHhccCCCcc-------------ccccCc--
Q 001971 731 VVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVR----KNSRPLVDLLLRFVPLEV-------------SDRLGS-- 791 (988)
Q Consensus 731 VVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr----~g~~eiVelLL~~~p~~~-------------~~Ga~~-- 791 (988)
+++.|++.+.. .++ ..+..|+||||+|++ .|+.++|++||+...... ..|+++
T Consensus 182 ~~~~ll~~~~~-~~~-------~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 253 (327)
T 1sw6_A 182 TFEALLDYLYP-CLI-------LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 253 (327)
T ss_dssp CHHHHHHHHGG-GGG-------EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------
T ss_pred HHHHHHHhhhc-ccc-------CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccc
Confidence 88888887632 111 135568999999999 899999999997611000 001100
Q ss_pred ----cccccccccccccc--cCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHc
Q 001971 792 ----ENKALVDGVHKGFL--FRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLR 865 (988)
Q Consensus 792 ----~~~~l~~~s~~~y~--fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~r 865 (988)
+.+|++......++ .++|.+|..|+||||+||. .|+.++|++|+++ ||+++++|..|+||||+|+.+
T Consensus 254 ~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~-~g~~~~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 254 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR-LGNISIVDALLDY------GADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp ------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHH-HCCHHHHHHHHHT------TCCTTCCCTTSCCGGGGTCC-
T ss_pred ccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHH-cCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHhc
Confidence 01222221110110 1589999999999999999 9999999999999 999999999999999999876
Q ss_pred C
Q 001971 866 G 866 (988)
Q Consensus 866 G 866 (988)
|
T Consensus 327 g 327 (327)
T 1sw6_A 327 E 327 (327)
T ss_dssp -
T ss_pred C
Confidence 5
No 95
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.69 E-value=6.7e-17 Score=180.66 Aligned_cols=126 Identities=20% Similarity=0.090 Sum_probs=112.0
Q ss_pred chHHHHHHHc-CchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 717 KWLIEFSMDH-EWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 717 k~lL~~Ave~-g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
.++||.|+.. ++.++|+.||+..++.+.. . ....|.||||+|+..|+.++|++||++ |+
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~----~---~~~~g~TpLh~Aa~~g~~~iv~~LL~~-------Ga------ 259 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWV----N---GGQDNATPLIQATAANSLLACEFLLQN-------GA------ 259 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCC----C---TTTTCCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCcc----c---cccCCCCHHHHHHHCCCHHHHHHHHHc-------CC------
Confidence 4699999999 9999999999965543211 1 124588999999999999999999999 87
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
++|..|..|+||||+|+. .|+.++|++|+++ ||+++++|.+|.||||+|+..||.+++++|.
T Consensus 260 -----------dvn~~d~~G~TpLh~A~~-~g~~~~v~~LL~~------Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl 321 (368)
T 3jue_A 260 -----------NVNQADSAGRGPLHHATI-LGHTGLACLFLKR------GADLGARDSEGRDPLTIAMETANADIVTLLR 321 (368)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred -----------CCCCCCCCCCCHHHHHHH-cCcHHHHHHHHHC------cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 899999999999999999 9999999999999 9999999999999999999999999999999
Q ss_pred Hhhhc
Q 001971 876 KKINK 880 (988)
Q Consensus 876 ~k~ak 880 (988)
..+.+
T Consensus 322 ~~~~~ 326 (368)
T 3jue_A 322 LAKMR 326 (368)
T ss_dssp HHHC-
T ss_pred HcCCC
Confidence 87643
No 96
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.67 E-value=9.1e-17 Score=146.50 Aligned_cols=97 Identities=28% Similarity=0.335 Sum_probs=91.2
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHH
Q 001971 754 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 833 (988)
Q Consensus 754 ~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~ 833 (988)
.+..|.||||+|++.|+.+++++||+. |+ ++|..|..|.||||+|+. .|+.++++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~~~ 59 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK-------GA-----------------DVNARSKDGNTPLHLAAK-NGHAEIVK 59 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT-------TC-----------------CSSCCCSSSCCTTHHHHT-TTCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCcHHHHH
Confidence 355689999999999999999999999 76 789999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 001971 834 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 834 lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~ 881 (988)
+|+++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 60 ~Ll~~------g~~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 60 LLLAK------GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp HHTTT------TCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH
T ss_pred HHHHc------CCCCcccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 99999 9999999999999999999999999999999998764
No 97
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.67 E-value=2e-16 Score=148.53 Aligned_cols=98 Identities=29% Similarity=0.330 Sum_probs=91.6
Q ss_pred hccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHH
Q 001971 754 LALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLD 833 (988)
Q Consensus 754 ~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~ 833 (988)
.+..|.||||+|++.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.++++
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~~~ 60 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQN-------GS-----------------DPNVKDHAGWTPLHEACN-HGHLKVVE 60 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CSCCCCTTSCCHHHHHHH-TTCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCcCCCCCCCHHHHHHH-cCCHHHHH
Confidence 355689999999999999999999999 77 789999999999999999 99999999
Q ss_pred HhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 834 ALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 834 lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
+|+++ +++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 61 ~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 103 (137)
T 3c5r_A 61 LLLQH------KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN 103 (137)
T ss_dssp HHHHT------TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHHc------CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 99999 99999999999999999999999999999999877643
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.67 E-value=2.5e-16 Score=145.54 Aligned_cols=94 Identities=23% Similarity=0.140 Sum_probs=88.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhh
Q 001971 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (988)
Q Consensus 757 ~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL 836 (988)
.+.||||+|++.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.+++++|+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~-------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll 60 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAK-------GE-----------------DVNRTLEGGRKPLHYAAD-CGQLEILEFLL 60 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTSCCTTSSCHHHHHHH-TTCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc-------CC-----------------CcCccCCCCCcHHHHHHH-cCCHHHHHHHH
Confidence 367999999999999999999998 66 789999999999999999 99999999999
Q ss_pred cCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 001971 837 DDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 837 ~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~ 881 (988)
++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 61 ~~------g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 99 (123)
T 3aaa_C 61 LK------GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADK 99 (123)
T ss_dssp TT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred Hc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99 9999999999999999999999999999999987754
No 99
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.66 E-value=9.7e-17 Score=154.51 Aligned_cols=141 Identities=17% Similarity=0.073 Sum_probs=102.2
Q ss_pred hhcCCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhccccccCCC
Q 001971 670 ERFGKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGE 748 (988)
Q Consensus 670 ~~~g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~ 748 (988)
.+.+.+++|.+| .+.+..+.||++++......+ ...+++||+|+ .++.++++.||+..++.+.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~-----------~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~---- 72 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPN-----------SYGRRPIQVMM-MGSARVAELLLLHGAEPNC---- 72 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCC-----------SSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC----
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCC-----------CCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC----
Confidence 356789999999 688999999998774322222 23578999985 8999999999996543211
Q ss_pred CCchhhccCCCc-HHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCC
Q 001971 749 HPSLDLALTELG-LLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDG 827 (988)
Q Consensus 749 ~~~l~~~l~G~T-pLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G 827 (988)
.+..|.| |||+|++.|+.++|++||++ |+ ++|.+|..|.||||+|+. .|
T Consensus 73 -----~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-------ga-----------------~~~~~d~~g~tpl~~A~~-~~ 122 (156)
T 1bi7_B 73 -----ADPATLTRPVHDAAREGFLDTLVVLHRA-------GA-----------------RLDVRDAWGRLPVDLAEE-LG 122 (156)
T ss_dssp -----CCTTTCCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CSSCCCTTCCCHHHHHHH-HT
T ss_pred -----cCCCCCcHHHHHHHHCCCHHHHHHHHHc-------CC-----------------CCcccCCCCCCHHHHHHH-hC
Confidence 2445778 99999999999999999999 77 899999999999999999 89
Q ss_pred CHHHHHHhhcCCCCCccccccccCCCCCCCHHHHH
Q 001971 828 SEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYA 862 (988)
Q Consensus 828 ~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A 862 (988)
+.+++++|+++ ||+++.+|..|.||.+-+
T Consensus 123 ~~~~v~~Ll~~------ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 123 HRDVARYLRAA------AGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHSSC------C-----------------
T ss_pred HHHHHHHHHHc------CCCCCccCcCcCcccccC
Confidence 99999999999 999999999999998743
No 100
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.63 E-value=5.7e-16 Score=141.80 Aligned_cols=90 Identities=24% Similarity=0.229 Sum_probs=84.4
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHH
Q 001971 755 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 834 (988)
Q Consensus 755 ~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~l 834 (988)
+..|.|+||+|+..|+.++|++||+. |+ ++|.+|..|.||||+|+. .|+.+++++
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~i~~~d~~g~tpLh~A~~-~~~~~~v~~ 75 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMAN-------GA-----------------DVAAKDKNGSTPLHLAAR-NGHLEVVKL 75 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCCHHHHHHH-TTCHHHHHH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCccCCCCCCHHHHHHH-cCCHHHHHH
Confidence 44578999999999999999999999 77 789999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001971 835 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQ 875 (988)
Q Consensus 835 LL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~ 875 (988)
|+++ |++++.+|..|.||||+|+..|+.+++++|+
T Consensus 76 Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L~ 110 (110)
T 2zgd_A 76 LLEA------GADVXAQDKFGKTAFDISIDNGNEDLAEILQ 110 (110)
T ss_dssp HHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHC
T ss_pred HHHc------CCCccccccCCCcHHHHHHHcCCHHHHHHhC
Confidence 9999 9999999999999999999999999999873
No 101
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.63 E-value=6e-16 Score=145.69 Aligned_cols=95 Identities=24% Similarity=0.248 Sum_probs=89.2
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHh
Q 001971 756 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (988)
Q Consensus 756 l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lL 835 (988)
..+.||||+||+.|+.++|++||+. |+ ++|..|..|.||||+|+. .|+.+++++|
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~L 66 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMAN-------GA-----------------DVNAKDEYGLTPLYLATA-HGHLEIVEVL 66 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 3467999999999999999999999 76 789999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 001971 836 TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 836 L~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~ 881 (988)
+++ |++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 67 l~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 106 (136)
T 2jab_A 67 LKN------GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADV 106 (136)
T ss_dssp HHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred HHc------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999 9999999999999999999999999999999987654
No 102
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.63 E-value=9.8e-17 Score=161.89 Aligned_cols=124 Identities=9% Similarity=-0.089 Sum_probs=105.0
Q ss_pred hHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCH----HHHHHHhccCCCccccccCccc
Q 001971 718 WLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSR----PLVDLLLRFVPLEVSDRLGSEN 793 (988)
Q Consensus 718 ~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~----eiVelLL~~~p~~~~~Ga~~~~ 793 (988)
+.|+.|+..|+.+.++.++.... + .. .+..|.||||+|+..++. ++|++||+. |+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~~----~-----~~-~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-------Ga---- 66 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKGY----E-----DK-ESVLKSNILYDVLRNNNDEARYKISMFLINK-------GA---- 66 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHSS----S-----CH-HHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-------TC----
T ss_pred cHHHHHHHcCCHHHHHHHHhcCc----c-----cc-cccCCCCHHHHHHHcCCcchHHHHHHHHHHC-------CC----
Confidence 57899999999999999987421 1 11 124588999999999985 599999999 88
Q ss_pred cccccccccccccCCccCCCCCChHHHHHHhhCCC------HHHHHHhhcCCCCCccccccccCCCCCC-CHHHHHHHcC
Q 001971 794 KALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGS------EDVLDALTDDPGMVGIEAWKNARDSSGS-TPEDYARLRG 866 (988)
Q Consensus 794 ~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~------~eVV~lLL~~p~~vg~gAdvnarD~~G~-TPLh~A~~rG 866 (988)
++|.+|..|+||||+|+. .|+ .++|++|+++ ||++|++|..|. ||||+|+..+
T Consensus 67 -------------dvn~~d~~g~TpLh~a~~-~~~~~~~~~~~iv~~Ll~~------Gadin~~d~~g~ttpLh~A~~~~ 126 (186)
T 3t8k_A 67 -------------DIKSRTKEGTTLFFPLFQ-GGGNDITGTTELCKIFLEK------GADITALYKPYKIVVFKNIFNYF 126 (186)
T ss_dssp -------------CSSCCCTTCCCTHHHHHH-HCTTCHHHHHHHHHHHHHT------TCCSSSCBGGGTBCTTGGGGGCC
T ss_pred -------------CCCCCCCCCCcHHHHHHH-cCCcchhhHHHHHHHHHHC------CCCCCccCCCcCchHHHHHHHcC
Confidence 899999999999999999 676 5789999999 999999999999 9999999954
Q ss_pred -----CHHHHHHHHH-hhhcCC
Q 001971 867 -----HYSYIHLVQK-KINKRP 882 (988)
Q Consensus 867 -----h~evveLL~~-k~ak~~ 882 (988)
+.+++++|.+ ++++..
T Consensus 127 ~~~~~~~~iv~~Ll~~~gad~~ 148 (186)
T 3t8k_A 127 VDENEMIPLYKLIFSQSGLQLL 148 (186)
T ss_dssp SCHHHHHHHHHHHHTSTTCCTT
T ss_pred CChhhHHHHHHHHHHhcCCCCc
Confidence 4568999988 777654
No 103
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.63 E-value=4.6e-16 Score=146.51 Aligned_cols=95 Identities=20% Similarity=0.186 Sum_probs=89.2
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHH
Q 001971 755 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 834 (988)
Q Consensus 755 ~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~l 834 (988)
+..|.||||+|++.|+.++|++||+. |+ ++|.+|..|+||||+|+. |+.+++++
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~--~~~~~v~~ 62 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEA-------GA-----------------DPNALNRFGRRPIQVMMM--GSAQVAEL 62 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CTTCCCTTCCTTTTTSTT--SCHHHHHH
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHc-------CC-----------------CcCCcCCCCCCHHHHHHc--CCHHHHHH
Confidence 45688999999999999999999999 77 889999999999999998 99999999
Q ss_pred hhcCCCCCccccccccCCCC-CCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 001971 835 LTDDPGMVGIEAWKNARDSS-GSTPEDYARLRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 835 LL~~p~~vg~gAdvnarD~~-G~TPLh~A~~rGh~evveLL~~k~ak~ 881 (988)
|+++ +++++.+|.. |.||||+|+..|+.+++++|.+++++.
T Consensus 63 Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 63 LLLH------GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp HHHH------TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC
T ss_pred HHHC------CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 9999 9999999999 999999999999999999999987654
No 104
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.61 E-value=1.3e-15 Score=157.60 Aligned_cols=97 Identities=22% Similarity=0.133 Sum_probs=90.9
Q ss_pred ccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHH
Q 001971 755 ALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDA 834 (988)
Q Consensus 755 ~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~l 834 (988)
...+.||||+|++.|+.++|++||+. |+ ++|..|..|+||||+|+. .|+.++|++
T Consensus 18 ~~~~~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~d~~g~tpLh~A~~-~g~~~~v~~ 72 (229)
T 2vge_A 18 RLNPLVLLLDAALTGELEVVQQAVKE-------MN-----------------DPSQPNEEGITALHNAIC-GANYSIVDF 72 (229)
T ss_dssp TSCHHHHHHHHHHHTCHHHHHHHHHH-------SS-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHH
T ss_pred ccchhHHHHHHHHcCCHHHHHHHHhc-------CC-----------------CCCCCCCCCCCHHHHHHH-cCCHHHHHH
Confidence 44577999999999999999999999 77 889999999999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 835 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 835 LL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
|+++ |+++|.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 73 Ll~~------ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~ 114 (229)
T 2vge_A 73 LITA------GANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIF 114 (229)
T ss_dssp HHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred HHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 9999 99999999999999999999999999999999987643
No 105
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.61 E-value=2.2e-15 Score=136.95 Aligned_cols=93 Identities=30% Similarity=0.371 Sum_probs=87.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhc
Q 001971 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTD 837 (988)
Q Consensus 758 G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~ 837 (988)
|.||||+|++.|+.++|++|++. |+ +++..+..|.||||+|+. .|+.+++++|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-------~~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~~~~Ll~ 56 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEA-------GA-----------------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLE 56 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH-------TC-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHHHH
T ss_pred CccHHHHHHHcCcHHHHHHHHHc-------CC-----------------CCCCcCCCCCcHHHHHHH-cCcHHHHHHHHH
Confidence 78999999999999999999998 66 788899999999999999 999999999999
Q ss_pred CCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 001971 838 DPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 838 ~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~ 881 (988)
+ +++++.+|..|.||||+|+..|+.+++++|.+++++.
T Consensus 57 ~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~ 94 (126)
T 1n0r_A 57 A------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 94 (126)
T ss_dssp T------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred c------CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCC
Confidence 9 9999999999999999999999999999999987653
No 106
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.59 E-value=3e-15 Score=151.57 Aligned_cols=97 Identities=21% Similarity=0.235 Sum_probs=90.3
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHh
Q 001971 756 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (988)
Q Consensus 756 l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lL 835 (988)
..|.||||+|++.|+.++|++||+. |+ ++|..|..|+||||+|+. .|+.++|++|
T Consensus 71 ~~g~t~L~~A~~~g~~~~v~~Ll~~-------g~-----------------~~~~~~~~g~t~L~~A~~-~~~~~~v~~L 125 (222)
T 3ehr_A 71 ESIDNPLHEAAKRGNLSWLRECLDN-------RV-----------------GVNGLDKAGSTALYWACH-GGHKDIVEML 125 (222)
T ss_dssp EEESCHHHHHHHHTCHHHHHHHHHT-------TC-----------------CTTCCCTTSCCHHHHHHH-TTCHHHHHHH
T ss_pred cccccccccccccCcHHHHHHHHhC-------CC-----------------CccccCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 3477999999999999999999998 77 889999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 836 TDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 836 L~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
+++. +++++.+|..|.||||+|+..|+.+++++|.+++++..
T Consensus 126 l~~~-----g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 167 (222)
T 3ehr_A 126 FTQP-----NIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD 167 (222)
T ss_dssp TTST-----TCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSC
T ss_pred HcCC-----CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc
Confidence 9874 89999999999999999999999999999999987643
No 107
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.58 E-value=2.3e-15 Score=137.18 Aligned_cols=105 Identities=24% Similarity=0.188 Sum_probs=91.3
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
..+++||+|+..++.++++.|++..++.+ . .+..|.||||+|+..|+.++|++||++ |+
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~----~-----~d~~g~t~L~~A~~~~~~~~~~~Ll~~-------g~----- 66 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVN----A-----RSKDGNTPLHLAAKNGHAEIVKLLLAK-------GA----- 66 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSS----C-----CCSSSCCTTHHHHTTTCHHHHHHHTTT-------TC-----
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC----C-----cCCCCCCHHHHHHHcCcHHHHHHHHHc-------CC-----
Confidence 45789999999999999999998644311 1 244688999999999999999999999 77
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCccccccccCCCCCCCHH
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNARDSSGSTPE 859 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPL 859 (988)
++|.+|..|.||||+|+. .|+.+++++|+++ ||++|.+|..|.||-
T Consensus 67 ------------~~~~~d~~g~tpl~~A~~-~~~~~~~~~Ll~~------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 67 ------------DVNARSKDGNTPEHLAKK-NGHHEIVKLLDAK------GADVNARSWGSSHHH 112 (115)
T ss_dssp ------------CTTCCCTTCCCTTHHHHT-TTCHHHHHHHHTT------SSSHHHHSCCCC---
T ss_pred ------------CCcccCCCCCCHHHHHHH-CCCHHHHHHHHHc------CCCCCcCCccccccc
Confidence 789999999999999999 9999999999999 999999999999985
No 108
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.57 E-value=2e-16 Score=177.27 Aligned_cols=155 Identities=12% Similarity=0.053 Sum_probs=121.3
Q ss_pred CCcccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHcCchHHHHHHhhhhcccc-ccCCCCC
Q 001971 673 GKIDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDHEWCAVVKKLLHILLDGT-VSLGEHP 750 (988)
Q Consensus 673 g~~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~g~~aVVk~LL~~l~dg~-vd~g~~~ 750 (988)
+.+++|.+| .+.+..+.+|+.++......+ ....+..+|||+|+..|+.++|++|++..++.. ++
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~--------~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~----- 158 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVK--------VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM----- 158 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC----------CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHH-----
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHH--------HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccc-----
Confidence 468999999 699999999998874110000 111245779999999999999999999643210 01
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCcc--CCCCCChHHHHHH-hhCC
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDV--IGPAGLTPIHIAA-GKDG 827 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~--~d~~G~TPLHiAA-~~~G 827 (988)
. .... .||||+|+++|+.++|++||++ |+ +++. .|..|.||||+|| . .|
T Consensus 159 -i-~~~~-~TpLh~Aa~~G~~eiv~~Ll~~-------ga-----------------~~~~~~~d~~g~TpL~~Aa~~-~G 210 (376)
T 2aja_A 159 -I-QAEN-YHAFRLAAENGHLHVLNRLCEL-------AP-----------------TEATAMIQAENYYAFRWAAVG-RG 210 (376)
T ss_dssp -H-SHHH-HHHHHHHHHTTCHHHHHHHHHS-------CG-----------------GGHHHHHHHHHHHHHHHHHST-TC
T ss_pred -c-CCCC-CCHHHHHHHCCCHHHHHHHHHc-------CC-----------------ccchhccCCCCCCHHHHHHHH-CC
Confidence 1 0112 6999999999999999999999 76 5565 7788999999999 8 99
Q ss_pred CHHHHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 001971 828 SEDVLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 828 ~~eVV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~ 881 (988)
+.+||++|+++ |++ |.||||+|+..||.+++++|.+++++.
T Consensus 211 ~~eiv~~Ll~~------ga~-------~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 211 HHNVINFLLDC------PVM-------LAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp CHHHHHHHTTS------HHH-------HHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHhC------CCc-------cchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 99999999998 653 899999999999999999999998754
No 109
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.56 E-value=3e-15 Score=161.75 Aligned_cols=143 Identities=14% Similarity=-0.020 Sum_probs=104.1
Q ss_pred cccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHHc---CchHHHHHHhhhhccccccCCCCC
Q 001971 675 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMDH---EWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 675 ~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave~---g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
.+++.++ .+.+..+-+++..+......- .....-....++||+|+.. ++.++|++||+..++.+ .
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~-----~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn----~-- 221 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPL-----PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD----A-- 221 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCE-----ECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT----C--
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccC-----CCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC----C--
Confidence 3467776 466666777776653211100 0000123468899999987 89999999999754321 1
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
.+..|.||||+|+..|+.++|++||++ |+ ++|.+|..|.||||+|+. .|+.+
T Consensus 222 ---~d~~G~TpLh~A~~~g~~~~v~~Ll~~-------ga-----------------d~~~~d~~G~TpL~~A~~-~~~~~ 273 (301)
T 2b0o_E 222 ---KAADGNTALHYAALYNQPDCLKLLLKG-------RA-----------------LVGTVNEAGETALDIARK-KHHKE 273 (301)
T ss_dssp ---CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----------------CCSCCCTTSCCHHHHHHH-HTCHH
T ss_pred ---CCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHH
Confidence 245689999999999999999999999 88 899999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHHcCCH
Q 001971 831 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHY 868 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~ 868 (988)
++++|+++ +++ .|.||||+|+..||.
T Consensus 274 iv~~Ll~~------ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 274 CEELLEQA------QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHHH------HHH------TTSSCCC--------
T ss_pred HHHHHHHh------cCC------CCCChhHHHHhcCCc
Confidence 99999998 776 589999999999874
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.55 E-value=1.4e-14 Score=127.87 Aligned_cols=89 Identities=26% Similarity=0.259 Sum_probs=78.6
Q ss_pred cchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccc
Q 001971 716 FKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKA 795 (988)
Q Consensus 716 ~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~ 795 (988)
.+++||+|+..++.++++.|++..++.+ . .+..|.||||+|+..|+.++|++|+++ |+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n----~-----~d~~g~t~L~~A~~~~~~~~v~~Ll~~-------ga------ 59 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVN----A-----KDKNGRTPLHLAARNGHLEVVKLLLEA-------GA------ 59 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTT----C-----CCTTSCCHHHHHHHTTCHHHHHHHHHT-------TC------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCc----c-----cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC------
Confidence 3689999999999999999999654321 1 245688999999999999999999999 77
Q ss_pred cccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcC
Q 001971 796 LVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDD 838 (988)
Q Consensus 796 l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~ 838 (988)
++|.+|..|.||||+|+. .|+.+++++|+++
T Consensus 60 -----------~~~~~d~~g~t~l~~A~~-~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 60 -----------DVNAKDKNGRTPLHLAAR-NGHLEVVKLLLEA 90 (93)
T ss_dssp -----------CTTCCCTTSCCHHHHHHH-TTCHHHHHHHHHT
T ss_pred -----------CCCccCCCCCCHHHHHHH-cCCHHHHHHHHHc
Confidence 889999999999999999 9999999999998
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.54 E-value=6.7e-16 Score=172.99 Aligned_cols=129 Identities=12% Similarity=0.085 Sum_probs=102.5
Q ss_pred chHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccccc
Q 001971 717 KWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKAL 796 (988)
Q Consensus 717 k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l 796 (988)
+++||+|+..|+.++|+.|++....... ... .+..+.||||+|++.|+.++|++|+++ |++..
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~----~~~--~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-------gad~~---- 155 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEI----VKV--IQAENYQAFRLAAENGHLHVLNRLCEL-------APTEI---- 155 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSS----CC----CHHHHHHHHHHHHTTCHHHHHHHHHS-------CTTTH----
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHH----HHH--hccCCCCHHHHHHHcCCHHHHHHHHhC-------CCCcc----
Confidence 5899999999999999999986431100 000 122366899999999999999999999 54100
Q ss_pred ccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhhcCCCCCcccccccc--CCCCCCCHHHHHH-HcCCHHHHHH
Q 001971 797 VDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALTDDPGMVGIEAWKNA--RDSSGSTPEDYAR-LRGHYSYIHL 873 (988)
Q Consensus 797 ~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL~~p~~vg~gAdvna--rD~~G~TPLh~A~-~rGh~evveL 873 (988)
.++..+.+ .||||+||. .|+.+||++|+++ |++++. +|..|.||||+|+ ..||.+++++
T Consensus 156 ----------~~~i~~~~-~TpLh~Aa~-~G~~eiv~~Ll~~------ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~ 217 (376)
T 2aja_A 156 ----------MAMIQAEN-YHAFRLAAE-NGHLHVLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNVINF 217 (376)
T ss_dssp ----------HHHHSHHH-HHHHHHHHH-TTCHHHHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHH
T ss_pred ----------ccccCCCC-CCHHHHHHH-CCCHHHHHHHHHc------CCccchhccCCCCCCHHHHHHHHCCCHHHHHH
Confidence 02333333 999999999 9999999999999 999988 8999999999999 9999999999
Q ss_pred HHHhhhc
Q 001971 874 VQKKINK 880 (988)
Q Consensus 874 L~~k~ak 880 (988)
|.++++.
T Consensus 218 Ll~~ga~ 224 (376)
T 2aja_A 218 LLDCPVM 224 (376)
T ss_dssp HTTSHHH
T ss_pred HHhCCCc
Confidence 9987653
No 112
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.54 E-value=1.4e-14 Score=143.33 Aligned_cols=94 Identities=20% Similarity=0.115 Sum_probs=87.2
Q ss_pred cCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHh
Q 001971 756 LTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (988)
Q Consensus 756 l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lL 835 (988)
..|.||||+|++.|+.++|++||+. + ++|..|..|+||||+|+. .|+.++|++|
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~~--------~-----------------~~~~~d~~g~t~L~~A~~-~~~~~~v~~L 95 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLED--------R-----------------DVDAVDENGRTALLFVAG-LGSDKCVRLL 95 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTTT--------S-----------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhc--------C-----------------CCCCcCCCCCCHHHHHHH-cCCHHHHHHH
Confidence 3577999999999999999999973 1 788999999999999999 9999999999
Q ss_pred hcCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcC
Q 001971 836 TDDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKR 881 (988)
Q Consensus 836 L~~p~~vg~gAdvnarD-~~G~TPLh~A~~rGh~evveLL~~k~ak~ 881 (988)
+++ |++++.+| ..|.||||+|+..|+.+++++|.+++++.
T Consensus 96 l~~------ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 136 (183)
T 3deo_A 96 AEA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI 136 (183)
T ss_dssp HHT------TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred HHc------CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC
Confidence 999 99999999 89999999999999999999999998764
No 113
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.51 E-value=2.4e-14 Score=148.83 Aligned_cols=94 Identities=20% Similarity=0.120 Sum_probs=87.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHhh
Q 001971 757 TELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDALT 836 (988)
Q Consensus 757 ~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lLL 836 (988)
.|.||||+|++.|+.++|++||+. + ++|.+|..|+||||+|+. .|+.++|++|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~~--------~-----------------~~~~~d~~g~t~L~~A~~-~g~~~~v~~Ll 97 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLED--------R-----------------DVDAVDENGRTALLFVAG-LGSDKCVRLLA 97 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTTT--------C-----------------CTTCBCTTSCBHHHHHHH-HTCHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHcC--------C-----------------CCCCcCCCCCCHHHHHHH-CCCHHHHHHHH
Confidence 477999999999999999999973 2 789999999999999999 99999999999
Q ss_pred cCCCCCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 837 DDPGMVGIEAWKNARD-SSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 837 ~~p~~vg~gAdvnarD-~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
++ |+++|.+| ..|.||||+|+..||.+++++|.+++++..
T Consensus 98 ~~------ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 138 (244)
T 3ui2_A 98 EA------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIE 138 (244)
T ss_dssp HT------TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred Hc------CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 99 99999999 889999999999999999999999987643
No 114
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.44 E-value=2.2e-13 Score=156.39 Aligned_cols=139 Identities=15% Similarity=0.010 Sum_probs=101.8
Q ss_pred cccHHHH-HHHHHHHhHhhcccccccccCCCCCCCCCccccccchHHHHHHH---cCchHHHHHHhhhhccccccCCCCC
Q 001971 675 IDTKNQA-MDFIHEIGWLFHRSQSKSRLGHLDPNTDLFPLRRFKWLIEFSMD---HEWCAVVKKLLHILLDGTVSLGEHP 750 (988)
Q Consensus 675 ~~lh~~a-m~fL~EIGWLLqr~~~~~~~~~~d~~~~l~qi~R~k~lL~~Ave---~g~~aVVk~LL~~l~dg~vd~g~~~ 750 (988)
..+|.++ .+.+..+..||.++........ ....-....++||+|+. .|+.++|++||+..++.+.
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~-----~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~------ 202 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLP-----GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDA------ 202 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBC-----CSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTC------
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCC-----CcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCc------
Confidence 4577787 5888888899888743221100 00112346899999966 8999999999997653221
Q ss_pred chhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhCCCHH
Q 001971 751 SLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSED 830 (988)
Q Consensus 751 ~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~e 830 (988)
.+..|+||||+|+..|+.++|++||++ |+ ++|.+|..|.||||+|+. .|+.+
T Consensus 203 ---~d~~g~TpLh~A~~~g~~~~v~~Ll~~-------ga-----------------~~~~~d~~g~tpl~~A~~-~~~~~ 254 (497)
T 3lvq_E 203 ---KAADGNTALHYAALYNQPDCLKLLLKG-------RA-----------------LVGTVNEAGETALDIARK-KHHKE 254 (497)
T ss_dssp ---CCSSSCCHHHHHTTTTCHHHHHHHHHT-------CC-----------------CCSCCCTTCCCHHHHHHH-TTCHH
T ss_pred ---cCCCCCcHHHHHHHcCCHHHHHHHHHc-------CC-----------------CCCCcCCCCCCHHHHHHH-cCCHH
Confidence 245689999999999999999999999 88 899999999999999999 99999
Q ss_pred HHHHhhcCCCCCccccccccCCCCCCCHHHHHHH
Q 001971 831 VLDALTDDPGMVGIEAWKNARDSSGSTPEDYARL 864 (988)
Q Consensus 831 VV~lLL~~p~~vg~gAdvnarD~~G~TPLh~A~~ 864 (988)
++++|+++ ||++++ ||+|++..
T Consensus 255 ~~~~Ll~~------ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 255 CEELLEQA------QAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHHHHHT------CC------------------
T ss_pred HHHHHHHh------CCCCCC------Ccceeecc
Confidence 99999999 999888 57776644
No 115
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.37 E-value=1e-12 Score=146.88 Aligned_cols=94 Identities=24% Similarity=0.186 Sum_probs=88.1
Q ss_pred CCcHHHHHHHc-CCHHHHHHHhccCCCccccccCccccccccccccccccCCccCC--CCCChHHHHHHhhCCCHHHHHH
Q 001971 758 ELGLLHRAVRK-NSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIG--PAGLTPIHIAAGKDGSEDVLDA 834 (988)
Q Consensus 758 G~TpLH~AVr~-g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d--~~G~TPLHiAA~~~G~~eVV~l 834 (988)
+.|+||.|++. ++.++|++||+. |+ ++|..+ ..|.||||+|+. .|+.++|++
T Consensus 199 ~~t~L~~Aa~~~g~~~~v~~LL~~-------Ga-----------------dvn~~~~~~~g~TpLh~Aa~-~g~~~iv~~ 253 (368)
T 3jue_A 199 PGALLFRASGHPPSLPTMADALAH-------GA-----------------DVNWVNGGQDNATPLIQATA-ANSLLACEF 253 (368)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHT-------TC-----------------CTTCCCTTTTCCCHHHHHHH-TTCHHHHHH
T ss_pred CCcHHHHHHHccCCHHHHHHHHHc-------CC-----------------CCCccccccCCCCHHHHHHH-CCCHHHHHH
Confidence 44899999999 999999999999 77 788887 899999999999 999999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 835 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 835 LL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
|+++ ||++|.+|..|.||||+|+..||.+++++|++++++..
T Consensus 254 LL~~------Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~ 295 (368)
T 3jue_A 254 LLQN------GANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295 (368)
T ss_dssp HHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred HHHc------CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC
Confidence 9999 99999999999999999999999999999999987653
No 116
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.32 E-value=2.9e-12 Score=136.76 Aligned_cols=100 Identities=16% Similarity=0.075 Sum_probs=86.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHhccCCCccccccCccccccccccccccccCCccCCCCCChHHHHHHhhC---CCHHHHHH
Q 001971 758 ELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENKALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKD---GSEDVLDA 834 (988)
Q Consensus 758 G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~---G~~eVV~l 834 (988)
..++||.|++.|+.+.|..|+.. |++. ...+.++..+..|+||||+||. . |+.++|++
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~-------g~~~-----------~~~~~l~~~~~~g~t~Lh~A~~-~~~~~~~~~v~~ 190 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYAD-------GVDL-----------TEKIPLANGHEPDETALHLAVR-SVDRTSLHIVDF 190 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT-------TCCT-----------TSBCCCSSCSSTTCBHHHHHHH-HCCTTTHHHHHH
T ss_pred hhhhhhhHhhhcccHHHHHHHHh-------hcch-----------hhhccccccccCCCCcchHHHH-hcccchHHHHHH
Confidence 34799999999999999999998 5411 1111255668899999999999 7 89999999
Q ss_pred hhcCCCCCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhhhcCC
Q 001971 835 LTDDPGMVGIEAWKNARDSSGSTPEDYARLRGHYSYIHLVQKKINKRP 882 (988)
Q Consensus 835 LL~~p~~vg~gAdvnarD~~G~TPLh~A~~rGh~evveLL~~k~ak~~ 882 (988)
|+++ ||++|.+|..|.||||+|+..||.+++++|.+++++..
T Consensus 191 Ll~~------ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~ 232 (278)
T 1dcq_A 191 LVQN------SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIE 232 (278)
T ss_dssp HHHH------CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred HHHC------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999 99999999999999999999999999999999987654
No 117
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.32 E-value=3.6e-12 Score=116.50 Aligned_cols=87 Identities=21% Similarity=0.129 Sum_probs=76.3
Q ss_pred ccchHHHHHHHcCchHHHHHHhhhhccccccCCCCCchhhccCCCcHHHHHHHcCCHHHHHHHhccCCCccccccCcccc
Q 001971 715 RFKWLIEFSMDHEWCAVVKKLLHILLDGTVSLGEHPSLDLALTELGLLHRAVRKNSRPLVDLLLRFVPLEVSDRLGSENK 794 (988)
Q Consensus 715 R~k~lL~~Ave~g~~aVVk~LL~~l~dg~vd~g~~~~l~~~l~G~TpLH~AVr~g~~eiVelLL~~~p~~~~~Ga~~~~~ 794 (988)
.+.++||+|+..|+.++++.|++..++.+ . .+..|.||||+|+..|+.++|++||++ |+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~----~-----~d~~g~tpLh~A~~~~~~~~v~~Ll~~-------ga----- 81 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGADVA----A-----KDKNGSTPLHLAARNGHLEVVKLLLEA-------GA----- 81 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTT----C-----CCTTCCCHHHHHHHTTCHHHHHHHHHT-------TC-----
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCCC----c-----cCCCCCCHHHHHHHcCCHHHHHHHHHc-------CC-----
Confidence 46889999999999999999998643211 1 244688999999999999999999999 77
Q ss_pred ccccccccccccCCccCCCCCChHHHHHHhhCCCHHHHHHh
Q 001971 795 ALVDGVHKGFLFRPDVIGPAGLTPIHIAAGKDGSEDVLDAL 835 (988)
Q Consensus 795 ~l~~~s~~~y~fdpN~~d~~G~TPLHiAA~~~G~~eVV~lL 835 (988)
++|.+|..|.||||+|+. .|+.+++++|
T Consensus 82 ------------~~~~~d~~g~tpl~~A~~-~~~~~~~~~L 109 (110)
T 2zgd_A 82 ------------DVXAQDKFGKTAFDISID-NGNEDLAEIL 109 (110)
T ss_dssp ------------CTTCCCTTSCCHHHHHHH-HTCHHHHHHH
T ss_pred ------------CccccccCCCcHHHHHHH-cCCHHHHHHh
Confidence 889999999999999999 9999999987
No 118
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=53.47 E-value=30 Score=31.63 Aligned_cols=39 Identities=21% Similarity=0.252 Sum_probs=32.6
Q ss_pred CceeEEeceeeEecCCceEEEEEeeccCCCCceE-EEEecCc
Q 001971 547 YSKILSVKPIAVPASERAQFFVKGINLGRSATRL-LCAVEGK 587 (988)
Q Consensus 547 ~p~i~~V~P~a~~ag~~~~~~v~G~NL~~p~~rl-lc~~~Gk 587 (988)
.|+|..++|..-.-| +.++++|.||......+ -+...|.
T Consensus 7 ~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg~ 46 (99)
T 1uad_C 7 PPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICGH 46 (99)
T ss_dssp CCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETTE
T ss_pred CCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECCE
Confidence 589999999988664 99999999999876665 4888883
No 119
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=32.59 E-value=66 Score=29.27 Aligned_cols=45 Identities=7% Similarity=0.049 Sum_probs=37.0
Q ss_pred CceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEecCccccee
Q 001971 547 YSKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQE 592 (988)
Q Consensus 547 ~p~i~~V~P~a~~ag~~~~~~v~G~NL~~p~~rllc~~~GkYl~~e 592 (988)
.=.|..++|-+-..+..+.+.|.|.+|.. +.++-|.|.+.-..+|
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~ 50 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPAS 50 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECE
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEE
Confidence 34899999999999999999999999965 4589999988543343
No 120
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=25.87 E-value=1e+02 Score=34.59 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=48.7
Q ss_pred CCCCc-eeEEeceeeEecCCceEEEEEeeccCCCCceEEEEecCcccceehhccccccccCccccccceEEeeecCCCcc
Q 001971 544 SNNYS-KILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGKYMVQEATHELLDDVDGFKELDELQCVNFSCSIPAV 622 (988)
Q Consensus 544 s~~~p-~i~~V~P~a~~ag~~~~~~v~G~NL~~p~~rllc~~~GkYl~~e~~~~~~~~~~~~~~~~ei~~~~~~~~~P~~ 622 (988)
.|+.| +|..+.|..- +..+++++.|.|+......+-+.|.|+-...- +.. .+.|. |.+|..
T Consensus 15 ~~~~p~~i~~~~P~~g--~~~~~~~i~G~nfg~~~~~~~v~~~~~~a~v~----~~~-------~~~i~-----~~vp~~ 76 (433)
T 4hw6_A 15 NPKEEIVVEKFLPTEG--RKGTRVVVYGRNFGNDVSKVKVTIGGYPAKVI----NVK-------GESLL-----CICPSK 76 (433)
T ss_dssp CTTSCCEEEEEESSEE--CTTCEEEEEEECCCSCGGGEEEEETTEEEEEE----EEC-------SSEEE-----EECCTT
T ss_pred CCCCCCEEEEECCCCC--CCCCEEEEEeECCCCCcceeEEEECCEEEEEE----EeC-------CCEEE-----EEeCCC
Confidence 34556 9999999984 66789999999999888899999999443321 111 23444 457877
Q ss_pred CCCceeeee
Q 001971 623 TGRGFIEIE 631 (988)
Q Consensus 623 ~G~~fIEVE 631 (988)
.|.+-|+|.
T Consensus 77 ~~~g~~~v~ 85 (433)
T 4hw6_A 77 AYEGDVKVS 85 (433)
T ss_dssp CTTCCEEEE
T ss_pred CCCCCEEEE
Confidence 665555553
No 121
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=21.72 E-value=1.5e+02 Score=32.98 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=33.2
Q ss_pred ceeEEeceeeEecCCceEEEEEeeccCCCCceEEEEecCc
Q 001971 548 SKILSVKPIAVPASERAQFFVKGINLGRSATRLLCAVEGK 587 (988)
Q Consensus 548 p~i~~V~P~a~~ag~~~~~~v~G~NL~~p~~rllc~~~Gk 587 (988)
|.|..+.|..-. ..+++++.|.|+......+-+.+.|+
T Consensus 18 ~~i~~~~P~~g~--~~~~~~i~G~nfg~~~~~~~v~~~~~ 55 (430)
T 3tc9_A 18 VVISEFSPKEGG--LGTRMLLYGENFGSDISKIKVTIGGQ 55 (430)
T ss_dssp CEEEEEECSEEC--TTCEEEEEEECCCSCGGGEEEEETTE
T ss_pred CEEEEEcCCCCC--CCCEEEEEEEcCCCCccceEEEECCE
Confidence 499999999875 57889999999998778999999994
Done!