Query 001972
Match_columns 988
No_of_seqs 835 out of 4105
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 06:54:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cxk_A Camta1, calmodulin bind 99.9 7.9E-26 2.7E-30 207.5 9.6 89 408-502 5-93 (95)
2 4gpm_A Engineered protein OR26 99.9 2.1E-23 7.2E-28 211.7 17.6 149 586-747 8-160 (169)
3 4gpm_A Engineered protein OR26 99.9 6.8E-22 2.3E-26 200.6 14.2 127 581-714 36-162 (169)
4 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.3E-20 4.6E-25 188.8 17.7 154 580-746 12-169 (169)
5 4b93_B Ankyrin repeat domain-c 99.8 4.9E-21 1.7E-25 208.2 14.3 170 583-771 53-227 (269)
6 3twr_A Tankyrase-2; ankyrin re 99.8 1.1E-20 3.9E-25 187.8 14.6 157 579-747 5-164 (165)
7 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.9E-20 6.6E-25 185.0 15.7 153 582-747 5-161 (162)
8 2rfm_A Putative ankyrin repeat 99.8 5.7E-21 2E-25 195.0 12.1 155 579-746 32-190 (192)
9 3v31_A Ankyrin repeat family A 99.8 3.2E-20 1.1E-24 184.9 15.1 152 583-747 4-159 (167)
10 1oy3_D Transcription factor in 99.8 2.8E-20 9.6E-25 199.5 15.7 159 581-751 44-254 (282)
11 3aji_A 26S proteasome non-ATPa 99.8 8.9E-20 3.1E-24 190.6 18.8 173 580-772 38-215 (231)
12 3f6q_A Integrin-linked protein 99.8 1E-19 3.5E-24 183.8 18.4 150 585-747 8-162 (179)
13 1awc_B Protein (GA binding pro 99.8 6.1E-20 2.1E-24 180.7 16.1 146 583-742 3-152 (153)
14 2jab_A H10-2-G3; HER2, darpin, 99.8 5.9E-20 2E-24 177.6 15.5 126 579-711 11-136 (136)
15 1s70_B 130 kDa myosin-binding 99.8 6.7E-20 2.3E-24 199.1 17.8 178 580-771 38-274 (299)
16 3utm_A Tankyrase-1; tankyrase, 99.8 1.5E-19 5.3E-24 199.3 20.3 182 580-775 56-326 (351)
17 1bi7_B P16INK4A, MTS1, multipl 99.8 8.7E-21 3E-25 187.8 8.9 139 580-732 10-149 (156)
18 1d9s_A Cyclin-dependent kinase 99.8 1.2E-20 3.9E-25 182.6 9.2 122 583-712 13-135 (136)
19 2rfa_A Transient receptor pote 99.8 1.3E-19 4.3E-24 189.8 17.6 183 583-772 4-207 (232)
20 3hra_A Ankyrin repeat family p 99.8 1.5E-19 5.1E-24 184.8 17.4 169 584-770 7-186 (201)
21 1d9s_A Cyclin-dependent kinase 99.8 5.1E-20 1.8E-24 178.0 12.9 129 606-747 2-135 (136)
22 1yyh_A HN1;, notch 1, ankyrin 99.8 1.2E-19 4.2E-24 193.7 16.7 154 581-747 56-214 (253)
23 3v30_A DNA-binding protein rfx 99.8 8.9E-20 3E-24 182.6 14.7 150 585-747 5-159 (172)
24 1oy3_D Transcription factor in 99.8 7.8E-20 2.7E-24 196.0 14.9 183 580-771 7-234 (282)
25 2etb_A Transient receptor pote 99.8 4.2E-20 1.4E-24 196.9 12.1 184 583-772 3-231 (256)
26 2xai_A ASB-9, ankyrin repeat a 99.8 2.2E-19 7.5E-24 192.8 17.8 150 584-747 5-158 (261)
27 2f8y_A Notch homolog 1, transl 99.8 4.6E-19 1.6E-23 184.2 18.7 155 580-747 23-182 (223)
28 4b93_B Ankyrin repeat domain-c 99.8 4.9E-20 1.7E-24 200.3 10.9 143 580-735 84-226 (269)
29 3aji_A 26S proteasome non-ATPa 99.8 2.4E-19 8.3E-24 187.3 15.4 154 580-746 71-228 (231)
30 3ljn_A Hypothetical protein; a 99.8 3E-19 1E-23 200.4 17.0 179 579-772 17-254 (364)
31 1bd8_A P19INK4D CDK4/6 inhibit 99.8 4.5E-19 1.5E-23 174.3 16.1 148 583-745 3-155 (156)
32 3c5r_A BARD-1, BRCA1-associate 99.8 1E-19 3.4E-24 175.7 10.7 127 606-745 1-127 (137)
33 1n0r_A 4ANK, 4 ankyrin repeats 99.8 3.4E-19 1.2E-23 167.5 13.9 123 584-713 4-126 (126)
34 2rfa_A Transient receptor pote 99.8 3.3E-19 1.1E-23 186.7 14.8 160 580-747 35-221 (232)
35 1yyh_A HN1;, notch 1, ankyrin 99.8 3.9E-19 1.3E-23 189.8 15.6 153 581-746 89-246 (253)
36 3utm_A Tankyrase-1; tankyrase, 99.8 7.5E-19 2.6E-23 193.8 18.2 132 580-717 22-153 (351)
37 3hra_A Ankyrin repeat family p 99.8 7.3E-19 2.5E-23 179.7 16.6 153 581-746 38-201 (201)
38 1ikn_D Protein (I-kappa-B-alph 99.8 1.2E-19 4E-24 191.1 11.0 156 580-747 43-208 (236)
39 2f8y_A Notch homolog 1, transl 99.8 7.9E-19 2.7E-23 182.4 17.1 153 582-747 58-215 (223)
40 1k1a_A B-cell lymphoma 3-encod 99.8 1.2E-18 4.1E-23 182.7 18.5 159 582-747 9-174 (241)
41 3v30_A DNA-binding protein rfx 99.8 2.1E-19 7.1E-24 179.9 12.1 126 581-713 35-160 (172)
42 3jxi_A Vanilloid receptor-rela 99.8 2.1E-19 7.2E-24 191.7 12.8 185 583-773 6-236 (260)
43 3d9h_A CDNA FLJ77766, highly s 99.8 6.8E-19 2.3E-23 192.0 17.0 154 580-747 57-214 (285)
44 1ihb_A P18-INK4C(INK6), cyclin 99.8 2.4E-19 8.2E-24 177.1 11.8 124 582-713 38-162 (162)
45 2xai_A ASB-9, ankyrin repeat a 99.8 1.1E-18 3.8E-23 187.3 17.8 168 581-770 35-207 (261)
46 3b7b_A Euchromatic histone-lys 99.8 7.9E-19 2.7E-23 184.1 16.2 170 582-771 44-219 (237)
47 1n0q_A 3ANK, 3 ankyrin repeats 99.8 3.8E-19 1.3E-23 160.7 11.9 92 615-712 1-92 (93)
48 1k1a_A B-cell lymphoma 3-encod 99.8 1.1E-18 3.9E-23 182.8 17.2 172 581-771 45-225 (241)
49 3b7b_A Euchromatic histone-lys 99.8 1.6E-18 5.6E-23 181.7 18.0 171 581-771 10-186 (237)
50 4g8k_A 2-5A-dependent ribonucl 99.8 1.7E-18 6E-23 192.1 18.8 177 581-771 24-248 (337)
51 1s70_B 130 kDa myosin-binding 99.8 2.4E-19 8.4E-24 194.7 11.6 151 581-744 72-282 (299)
52 1ikn_D Protein (I-kappa-B-alph 99.8 1.7E-19 5.9E-24 189.8 9.8 176 583-771 9-193 (236)
53 2dzn_A Probable 26S proteasome 99.8 5E-19 1.7E-23 184.2 12.5 153 582-747 36-199 (228)
54 2dzn_A Probable 26S proteasome 99.8 1.7E-18 5.8E-23 180.2 16.3 143 581-736 71-217 (228)
55 2etb_A Transient receptor pote 99.8 2E-19 6.7E-24 191.7 9.3 159 581-747 42-245 (256)
56 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.1E-18 3.8E-23 174.7 14.2 124 581-711 46-169 (169)
57 2pnn_A Transient receptor pote 99.8 4.6E-19 1.6E-23 190.9 12.2 186 581-772 12-243 (273)
58 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.9E-19 6.5E-24 191.1 8.9 151 583-747 6-163 (239)
59 1wdy_A 2-5A-dependent ribonucl 99.8 7.3E-18 2.5E-22 180.1 20.3 159 582-747 5-173 (285)
60 1wdy_A 2-5A-dependent ribonucl 99.8 3.8E-18 1.3E-22 182.3 17.9 176 582-771 39-228 (285)
61 1awc_B Protein (GA binding pro 99.8 1.7E-18 5.7E-23 170.4 13.9 120 581-707 33-152 (153)
62 3d9h_A CDNA FLJ77766, highly s 99.8 3.1E-18 1.1E-22 186.7 17.3 167 582-770 92-263 (285)
63 3aaa_C Myotrophin, protein V-1 99.8 8E-19 2.7E-23 166.5 11.0 117 613-741 4-120 (123)
64 3twr_A Tankyrase-2; ankyrin re 99.8 6.7E-19 2.3E-23 174.9 10.5 123 582-712 42-164 (165)
65 3f6q_A Integrin-linked protein 99.8 8.3E-19 2.8E-23 177.1 11.3 129 581-716 38-166 (179)
66 1n11_A Ankyrin; clathrin, BAND 99.8 3.1E-18 1.1E-22 196.8 17.2 155 581-747 13-170 (437)
67 3kea_A K1L; tropism, ANK repea 99.8 5.7E-19 1.9E-23 192.8 10.4 152 580-747 29-185 (285)
68 2vge_A RELA-associated inhibit 99.8 5.3E-19 1.8E-23 187.4 9.9 127 581-713 20-148 (229)
69 3t8k_A Uncharacterized protein 99.8 4.5E-19 1.6E-23 182.5 8.9 125 581-711 37-177 (186)
70 1sw6_A Regulatory protein SWI6 99.8 6.6E-19 2.2E-23 196.2 10.8 169 587-770 102-324 (327)
71 2rfm_A Putative ankyrin repeat 99.8 2.9E-18 9.8E-23 174.9 14.5 127 609-747 28-158 (192)
72 3jxi_A Vanilloid receptor-rela 99.8 4.5E-19 1.6E-23 189.1 8.9 158 582-747 46-249 (260)
73 1n11_A Ankyrin; clathrin, BAND 99.8 3.4E-18 1.2E-22 196.5 16.7 169 582-770 212-385 (437)
74 4hbd_A KN motif and ankyrin re 99.8 1.5E-18 5.1E-23 188.7 12.9 155 579-746 108-273 (276)
75 3v31_A Ankyrin repeat family A 99.8 2.4E-18 8.1E-23 171.3 13.1 124 581-711 35-158 (167)
76 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.6E-18 8.8E-23 168.9 12.3 120 582-710 36-155 (156)
77 2jab_A H10-2-G3; HER2, darpin, 99.8 2.4E-18 8.2E-23 166.3 11.9 123 612-746 10-136 (136)
78 2pnn_A Transient receptor pote 99.8 9.4E-19 3.2E-23 188.5 9.8 160 581-747 53-257 (273)
79 3aaa_C Myotrophin, protein V-1 99.8 2.1E-18 7E-23 163.6 10.3 115 581-702 6-120 (123)
80 3ljn_A Hypothetical protein; a 99.8 1.4E-18 4.9E-23 194.9 10.8 154 581-747 83-268 (364)
81 3kea_A K1L; tropism, ANK repea 99.8 1.8E-18 6E-23 188.9 11.2 152 582-747 62-219 (285)
82 1n0r_A 4ANK, 4 ankyrin repeats 99.7 6.6E-18 2.3E-22 158.6 13.4 121 615-747 1-125 (126)
83 4g8k_A 2-5A-dependent ribonucl 99.7 1E-17 3.5E-22 185.9 16.7 151 583-747 169-325 (337)
84 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.5E-18 5.1E-23 184.2 9.5 128 582-715 37-166 (239)
85 1bi7_B P16INK4A, MTS1, multipl 99.7 3.3E-18 1.1E-22 169.2 10.9 125 610-747 6-135 (156)
86 3ehr_A Osteoclast-stimulating 99.7 1.7E-18 5.9E-23 180.9 9.2 127 582-715 73-200 (222)
87 3c5r_A BARD-1, BRCA1-associate 99.7 8.8E-19 3E-23 169.1 6.4 125 580-711 8-132 (137)
88 3eu9_A Huntingtin-interacting 99.7 2.3E-17 7.7E-22 172.0 17.4 153 582-747 9-167 (240)
89 3t8k_A Uncharacterized protein 99.7 1.8E-18 6.2E-23 178.0 8.4 146 586-746 10-177 (186)
90 3lvq_E ARF-GAP with SH3 domain 99.7 8E-18 2.7E-22 198.5 14.7 129 584-719 134-271 (497)
91 1dcq_A PYK2-associated protein 99.7 1.7E-17 5.7E-22 181.4 15.9 125 584-715 132-265 (278)
92 2fo1_E LIN-12 protein; beta-ba 99.7 1.3E-17 4.4E-22 189.0 15.3 179 580-771 164-355 (373)
93 3deo_A Signal recognition part 99.7 5.1E-18 1.8E-22 172.5 10.7 139 580-745 42-181 (183)
94 1sw6_A Regulatory protein SWI6 99.7 2.6E-18 9E-23 191.3 9.3 149 579-734 128-323 (327)
95 3eu9_A Huntingtin-interacting 99.7 2.4E-17 8.1E-22 171.8 15.1 154 582-747 76-234 (240)
96 2vge_A RELA-associated inhibit 99.7 9.7E-18 3.3E-22 177.7 11.5 136 600-747 2-147 (229)
97 2l6b_A NR1C; ankyrin, consensu 99.7 5.1E-18 1.7E-22 158.7 8.2 104 611-725 4-107 (115)
98 3ui2_A Signal recognition part 99.7 1.6E-17 5.4E-22 177.4 12.4 139 580-745 43-182 (244)
99 3ehr_A Osteoclast-stimulating 99.7 5.4E-18 1.8E-22 177.1 8.3 124 612-747 69-197 (222)
100 2fo1_E LIN-12 protein; beta-ba 99.7 1.6E-17 5.6E-22 188.1 12.4 154 581-747 198-370 (373)
101 2b0o_E UPLC1; arfgap, structur 99.7 4.1E-17 1.4E-21 180.4 13.4 124 583-713 152-284 (301)
102 4hbd_A KN motif and ankyrin re 99.7 2.9E-17 9.8E-22 178.6 11.5 145 609-772 104-260 (276)
103 3jue_A Arfgap with coiled-coil 99.7 4.9E-17 1.7E-21 185.0 13.7 123 583-712 200-325 (368)
104 3deo_A Signal recognition part 99.7 2.6E-17 8.7E-22 167.4 8.8 111 613-735 41-151 (183)
105 3ui2_A Signal recognition part 99.7 7.2E-17 2.5E-21 172.2 11.1 111 613-735 42-152 (244)
106 2zgd_A 3 repeat synthetic anky 99.7 2.1E-16 7.2E-21 147.6 9.6 92 610-707 18-109 (110)
107 2dfs_A Myosin-5A; myosin-V, in 99.6 8.9E-16 3.1E-20 194.7 14.6 142 770-953 768-913 (1080)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.6 3.8E-15 1.3E-19 134.2 10.5 91 583-674 3-93 (93)
109 3jue_A Arfgap with coiled-coil 99.6 5.6E-15 1.9E-19 168.0 10.6 124 612-747 195-325 (368)
110 2l6b_A NR1C; ankyrin, consensu 99.5 2.9E-15 9.8E-20 139.9 6.0 104 582-692 9-112 (115)
111 3lvq_E ARF-GAP with SH3 domain 99.5 1.2E-14 3.9E-19 171.5 12.4 120 616-747 132-264 (497)
112 2b0o_E UPLC1; arfgap, structur 99.5 2.6E-14 8.9E-19 157.9 13.3 122 614-747 149-283 (301)
113 1dcq_A PYK2-associated protein 99.5 2.8E-14 9.4E-19 155.8 12.6 121 615-747 129-262 (278)
114 2aja_A Ankyrin repeat family p 99.5 4.6E-16 1.6E-20 177.5 -4.5 144 583-747 93-249 (376)
115 2aja_A Ankyrin repeat family p 99.4 5.1E-14 1.8E-18 160.6 3.0 119 615-746 91-222 (376)
116 2dfs_A Myosin-5A; myosin-V, in 99.4 1.3E-12 4.5E-17 165.9 14.3 120 770-896 791-912 (1080)
117 2zgd_A 3 repeat synthetic anky 99.4 1.4E-12 4.9E-17 121.4 10.7 89 579-668 21-109 (110)
118 2ix7_C Myosin-5A; contractIle 99.1 8.1E-11 2.8E-15 98.1 7.7 48 822-869 3-50 (58)
119 3muj_A Transcription factor CO 99.1 4.3E-10 1.5E-14 107.2 10.1 84 410-501 6-92 (138)
120 1n2d_C IQ2 and IQ3 motifs from 98.9 1.7E-09 5.7E-14 86.6 7.1 43 824-866 3-47 (48)
121 3mlp_A Transcription factor CO 98.8 2.9E-08 9.9E-13 107.1 11.5 90 408-505 230-322 (402)
122 1i84_S Smooth muscle myosin he 98.7 3.9E-08 1.3E-12 127.2 14.8 97 767-867 716-838 (1184)
123 1uad_C RSEC5, exocyst complex 98.3 3E-06 1E-10 78.2 9.5 84 409-500 7-95 (99)
124 1kk8_A Myosin heavy chain, str 98.2 9.7E-07 3.3E-11 109.3 6.6 98 767-868 703-826 (837)
125 1n2d_C IQ2 and IQ3 motifs from 98.0 1E-05 3.6E-10 64.3 6.4 44 846-889 2-47 (48)
126 2ix7_C Myosin-5A; contractIle 97.8 3.6E-05 1.2E-09 63.8 7.4 43 846-888 4-46 (58)
127 3tc9_A Hypothetical hydrolase; 97.8 3.6E-05 1.2E-09 88.9 9.8 86 408-500 16-106 (430)
128 1i84_S Smooth muscle myosin he 97.7 0.00024 8.1E-09 92.1 15.1 45 844-888 789-836 (1184)
129 3hrp_A Uncharacterized protein 97.6 0.00013 4.3E-09 83.6 9.6 86 408-500 16-105 (409)
130 1wdc_A Scallop myosin; calcium 97.6 0.00013 4.4E-09 61.7 7.0 46 821-866 3-51 (64)
131 3kya_A Putative phosphatase; s 97.5 0.00011 3.8E-09 86.3 8.1 86 408-500 16-104 (496)
132 2uzx_B Hepatocyte growth facto 97.5 8.4E-05 2.9E-09 91.3 6.7 92 409-500 541-636 (727)
133 2bl0_A Major plasmodial myosin 97.5 0.00015 5.2E-09 61.1 5.8 45 822-866 2-49 (63)
134 2uzx_B Hepatocyte growth facto 97.4 2.9E-05 9.8E-10 95.5 0.0 75 409-488 635-710 (727)
135 4anj_A Unconventional myosin-V 97.2 0.00029 9.8E-09 89.2 7.2 96 767-867 701-817 (1052)
136 2yrp_A Nuclear factor of activ 97.2 0.00094 3.2E-08 62.5 8.8 86 405-499 4-108 (114)
137 4hw6_A Hypothetical protein, I 97.2 0.00072 2.5E-08 78.1 9.7 86 408-500 18-108 (433)
138 1wdc_A Scallop myosin; calcium 96.6 0.0054 1.8E-07 51.7 7.5 42 846-887 5-49 (64)
139 2bl0_A Major plasmodial myosin 96.6 0.0043 1.5E-07 52.1 6.6 42 846-887 3-47 (63)
140 1w7j_A Myosin VA; motor protei 96.4 0.0015 5E-08 80.7 4.3 80 767-850 694-794 (795)
141 3gn4_A Myosin-VI; unconvention 96.3 0.041 1.4E-06 53.7 12.7 32 845-876 43-74 (148)
142 1ikn_C P50D, protein (NF-kappa 96.0 0.018 6.2E-07 54.4 8.2 83 411-500 5-106 (119)
143 1u36_A DNA-binding, nuclear fa 95.5 0.033 1.1E-06 51.5 7.8 82 411-499 5-105 (106)
144 1kk8_A Myosin heavy chain, str 95.1 0.038 1.3E-06 68.6 8.8 45 844-888 776-823 (837)
145 1my7_A NF-kappab P65 (RELA) su 95.0 0.043 1.5E-06 51.4 6.9 88 411-500 5-101 (114)
146 2l53_B CAM, voltage-gated sodi 95.0 0.02 6.7E-07 41.1 3.4 22 822-843 4-25 (31)
147 2kxw_B Sodium channel protein 94.7 0.017 6E-07 40.1 2.6 21 822-842 4-24 (27)
148 1oy3_C Transcription factor P6 93.9 0.1 3.5E-06 50.2 6.8 82 411-500 5-101 (136)
149 1zk9_A Transcription factor RE 93.4 0.025 8.6E-07 52.6 1.7 88 410-499 13-109 (110)
150 1a3q_A Protein (nuclear factor 92.5 0.29 9.8E-06 52.9 8.5 82 410-498 186-284 (285)
151 3gn4_A Myosin-VI; unconvention 91.9 0.23 7.7E-06 48.5 6.1 33 822-854 43-75 (148)
152 1nfk_A Protein (nuclear factor 91.9 0.35 1.2E-05 53.2 8.3 85 409-500 209-312 (325)
153 2v2t_A RELB, transcription fac 91.3 0.25 8.6E-06 53.5 6.4 85 408-499 189-287 (288)
154 1g8x_A Myosin II heavy chain f 91.3 3.4 0.00012 52.4 17.7 96 767-869 688-814 (1010)
155 1svc_P Protein (nuclear factor 90.8 0.41 1.4E-05 53.3 7.5 85 409-500 249-352 (365)
156 1ikn_A P65, protein (NF-kappa- 90.7 0.46 1.6E-05 51.3 7.7 85 409-500 175-273 (286)
157 2o61_A Transcription factor P6 90.4 0.4 1.4E-05 56.1 7.4 85 410-501 177-275 (540)
158 1p7h_L Nuclear factor of activ 90.4 0.47 1.6E-05 51.3 7.4 88 408-499 184-285 (286)
159 2ycu_A Non muscle myosin 2C, a 90.0 0.05 1.7E-06 69.0 -0.6 100 767-870 683-810 (995)
160 3iag_C Recombining binding pro 89.3 0.95 3.3E-05 50.7 9.0 68 426-500 343-421 (422)
161 2jee_A YIIU; FTSZ, septum, coi 88.9 1.2 4.2E-05 39.0 7.5 67 919-985 8-75 (81)
162 1gji_A C-REL protein, C-REL pr 87.2 0.9 3.1E-05 48.9 6.9 84 409-499 178-274 (275)
163 1imh_C NF-AT5, tonebp, nuclear 87.1 1.3 4.4E-05 47.8 8.0 88 408-499 180-280 (281)
164 2l53_B CAM, voltage-gated sodi 85.7 0.51 1.8E-05 33.8 2.7 19 848-866 7-25 (31)
165 3orj_A Sugar-binding protein; 85.1 1.6 5.6E-05 49.2 7.8 70 408-488 112-188 (439)
166 2kxw_B Sodium channel protein 84.5 0.47 1.6E-05 33.0 2.0 17 848-864 7-23 (27)
167 1w7j_A Myosin VA; motor protei 82.7 0.98 3.4E-05 55.8 5.3 29 845-873 766-794 (795)
168 3oja_B Anopheles plasmodium-re 75.8 14 0.00047 43.6 12.2 74 912-985 504-578 (597)
169 4dck_A Sodium channel protein 73.9 2.5 8.7E-05 42.2 4.2 25 821-845 127-151 (168)
170 3trt_A Vimentin; cytoskeleton, 73.6 9.1 0.00031 32.9 7.2 66 913-978 9-76 (77)
171 4anj_A Unconventional myosin-V 68.3 6.4 0.00022 50.0 7.1 34 849-882 776-809 (1052)
172 3o0z_A RHO-associated protein 63.4 96 0.0033 30.8 12.9 54 929-982 95-153 (168)
173 3brd_A LIN-12 and GLP-1 phenot 60.5 20 0.00067 41.0 8.3 67 426-499 391-474 (477)
174 3oky_A Plexin-A2; transmembran 60.3 27 0.00093 42.3 10.2 88 407-501 526-626 (681)
175 3oja_B Anopheles plasmodium-re 58.8 41 0.0014 39.5 11.4 60 923-982 522-582 (597)
176 2jee_A YIIU; FTSZ, septum, coi 57.1 22 0.00076 31.1 6.2 60 925-984 7-67 (81)
177 2d9z_A Protein kinase C, NU ty 56.0 6.6 0.00023 37.4 3.0 30 100-131 11-40 (129)
178 3u1c_A Tropomyosin alpha-1 cha 53.0 46 0.0016 30.2 8.1 73 910-982 23-96 (101)
179 3fpp_A Macrolide-specific effl 43.2 32 0.0011 37.3 6.6 67 916-982 68-145 (341)
180 3cvf_A Homer-3, homer protein 42.2 21 0.00072 31.1 3.7 40 931-970 13-53 (79)
181 3dvk_B Voltage-dependent R-typ 41.6 10 0.00035 25.3 1.3 17 825-841 7-23 (23)
182 3nmd_A CGMP dependent protein 41.2 25 0.00085 30.1 3.9 50 935-984 17-66 (72)
183 4fm3_A Uncharacterized hypothe 40.7 60 0.0021 29.4 6.6 63 919-982 31-95 (98)
184 1cxz_B Protein (PKN); protein- 40.5 55 0.0019 28.9 6.2 49 938-986 36-84 (86)
185 2v4h_A NF-kappa-B essential mo 40.1 85 0.0029 28.9 7.5 47 938-984 63-109 (110)
186 4dk0_A Putative MACA; alpha-ha 39.8 24 0.00082 38.8 4.9 33 918-950 71-104 (369)
187 2f3y_B Voltage-dependent L-typ 38.7 19 0.00064 24.5 2.2 17 826-842 4-20 (26)
188 1wt6_A Myotonin-protein kinase 37.2 85 0.0029 27.3 6.7 44 943-986 30-73 (81)
189 2v71_A Nuclear distribution pr 36.9 1.8E+02 0.0062 29.4 10.2 13 967-979 90-102 (189)
190 3u59_A Tropomyosin beta chain; 36.7 1.2E+02 0.004 27.4 8.1 73 910-982 23-96 (101)
191 3hnw_A Uncharacterized protein 36.3 92 0.0031 29.9 7.7 39 945-983 90-128 (138)
192 1ci6_A Transcription factor AT 35.9 34 0.0012 28.3 4.0 46 938-983 9-55 (63)
193 3hnw_A Uncharacterized protein 35.7 60 0.002 31.2 6.2 46 938-983 90-135 (138)
194 3cve_A Homer protein homolog 1 35.2 64 0.0022 27.6 5.5 43 930-972 6-49 (72)
195 4dck_A Sodium channel protein 33.4 27 0.00094 34.7 3.5 21 848-868 131-151 (168)
196 3orj_A Sugar-binding protein; 33.3 39 0.0013 38.3 5.1 69 421-499 34-111 (439)
197 3ghg_A Fibrinogen alpha chain; 33.0 1.3E+02 0.0043 35.0 9.2 25 929-953 122-147 (562)
198 3vkg_A Dynein heavy chain, cyt 32.2 1.3E+02 0.0046 42.8 11.1 42 944-985 2014-2055(3245)
199 3htk_A Structural maintenance 31.6 62 0.0021 26.1 4.9 39 946-984 21-59 (60)
200 2xzr_A Immunoglobulin-binding 31.6 75 0.0026 28.4 5.5 52 925-982 56-107 (114)
201 3m9b_A Proteasome-associated A 30.6 30 0.001 36.5 3.4 43 943-985 53-95 (251)
202 3iv1_A Tumor susceptibility ge 30.4 97 0.0033 26.9 5.9 51 923-983 17-71 (78)
203 3mq9_A Bone marrow stromal ant 30.2 86 0.0029 35.7 7.6 26 959-984 444-469 (471)
204 2ayd_A WRKY transcription fact 29.8 14 0.00048 32.0 0.7 8 70-77 15-22 (76)
205 3na7_A HP0958; flagellar bioge 29.6 5E+02 0.017 27.0 18.6 77 910-986 90-171 (256)
206 1wj2_A Probable WRKY transcrip 29.6 14 0.00047 32.2 0.6 9 70-78 18-26 (78)
207 3bxl_B CAM, voltage-dependent 29.2 36 0.0012 23.2 2.4 17 826-842 4-20 (26)
208 3m91_A Proteasome-associated A 28.9 51 0.0018 26.3 3.7 18 966-983 31-48 (51)
209 2f1m_A Acriflavine resistance 28.6 82 0.0028 33.0 6.6 44 940-983 77-130 (277)
210 2be6_D Voltage-dependent L-typ 28.3 42 0.0014 24.8 2.7 19 825-843 12-30 (37)
211 2v71_A Nuclear distribution pr 25.7 3E+02 0.01 27.8 9.6 21 960-980 90-110 (189)
212 2dgc_A Protein (GCN4); basic d 25.7 38 0.0013 28.1 2.5 31 952-982 31-61 (63)
213 2k48_A Nucleoprotein; viral pr 25.3 1.8E+02 0.0061 26.5 6.9 67 912-986 37-103 (107)
214 1gd2_E Transcription factor PA 25.3 52 0.0018 28.0 3.4 24 961-984 46-69 (70)
215 4dzn_A Coiled-coil peptide CC- 24.9 47 0.0016 23.0 2.4 13 969-981 6-18 (33)
216 1g6u_A Domain swapped dimer; d 24.9 61 0.0021 24.2 3.2 26 959-984 21-46 (48)
217 1qho_A Alpha-amylase; glycosid 24.6 2E+02 0.0069 34.5 9.8 66 409-482 498-563 (686)
218 1c1g_A Tropomyosin; contractIl 23.8 5.4E+02 0.019 25.5 16.4 15 965-979 160-174 (284)
219 3na7_A HP0958; flagellar bioge 23.4 6.3E+02 0.022 26.1 15.3 52 911-962 98-150 (256)
220 3v86_A De novo design helix; c 23.3 32 0.0011 22.9 1.3 22 963-984 5-26 (27)
221 3vkg_A Dynein heavy chain, cyt 23.2 8.6E+02 0.029 35.0 16.4 82 906-987 2010-2106(3245)
222 1t2k_D Cyclic-AMP-dependent tr 21.8 82 0.0028 25.7 3.9 24 959-982 30-53 (61)
223 3lay_A Zinc resistance-associa 21.8 2.1E+02 0.0071 28.5 7.5 40 943-982 91-130 (175)
224 1x79_B RAB GTPase binding effe 21.5 2.4E+02 0.0082 26.1 7.3 56 930-985 44-104 (112)
225 2eqb_B RAB guanine nucleotide 21.5 1.8E+02 0.006 26.3 6.2 15 912-926 7-21 (97)
226 2coa_A Protein kinase C, D2 ty 21.5 79 0.0027 29.9 4.1 32 98-131 9-40 (125)
227 3dve_B Voltage-dependent N-typ 21.4 13 0.00045 24.7 -0.8 17 825-841 6-22 (23)
228 4dnd_A Syntaxin-10, SYN10; str 21.3 1.9E+02 0.0067 27.3 6.9 23 959-981 106-128 (130)
229 2wt7_A Proto-oncogene protein 21.3 85 0.0029 25.8 3.9 26 958-983 30-55 (63)
230 3a5t_A Transcription factor MA 21.1 62 0.0021 29.8 3.2 68 910-984 31-98 (107)
231 3i00_A HIP-I, huntingtin-inter 20.8 2.5E+02 0.0085 26.3 7.4 68 910-977 11-80 (120)
232 2wt7_B Transcription factor MA 20.1 3.8E+02 0.013 23.8 8.0 67 911-984 22-88 (90)
No 1
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=99.92 E-value=7.9e-26 Score=207.52 Aligned_cols=89 Identities=34% Similarity=0.711 Sum_probs=81.4
Q ss_pred CceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCCCCCceeEEEEEeCCCc
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYITGSNRL 487 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pph~pG~V~l~Vt~~n~~ 487 (988)
.+++|+||||+|||..|||||+|+|.|+.. .++|.||||+++||++++++|+|+|++|||.||.|+|+|+|+++.
T Consensus 5 ~~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-----gs~~~~~fG~~~vpa~~~s~~vl~C~tPp~~~G~v~~~v~~d~~~ 79 (95)
T 2cxk_A 5 SSGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQI 79 (95)
T ss_dssp CCSCCCEEECSEECTTCCCEEEEESSCCCC-----SSCEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEE
T ss_pred CcEEEEEECCCcccCCCCEEEEEEeECCCC-----CccEEEEECCEEEeEEEeECCEEEEEecCCCCceEeEEEEECCee
Confidence 356899999999999999999999999965 458999999999999999999999999999999999999999877
Q ss_pred ccccceeeeeecCCC
Q 001972 488 ACSEVREFEYREKPS 502 (988)
Q Consensus 488 ~~Sev~~FeYr~~~~ 502 (988)
. |++++|||++.+.
T Consensus 80 ~-s~~~~FeY~~~Pt 93 (95)
T 2cxk_A 80 I-SNSVVFEYKSGPS 93 (95)
T ss_dssp C-SCCEEEEECCC--
T ss_pred c-CCceEEEEeCCCC
Confidence 4 9999999998764
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.90 E-value=2.1e-23 Score=211.70 Aligned_cols=149 Identities=26% Similarity=0.350 Sum_probs=132.2
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHH
Q 001972 586 IQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETV 665 (988)
Q Consensus 586 L~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV 665 (988)
|..|++.+..+ +++.|++.|+++|.+|..|+||||+|+..|+.+++++|++.|++++.+|..|+||||+||..|+.++|
T Consensus 8 L~~Aa~~G~~~-~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v 86 (169)
T 4gpm_A 8 LIEAAENGNKD-RVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVV 86 (169)
T ss_dssp HHHHHHTTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HHHHHHcCCHH-HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHH
Confidence 55677777544 56789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHH----hhHHHHHH
Q 001972 666 IMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANET 741 (988)
Q Consensus 666 ~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~----~~~~~v~~ 741 (988)
++|+++|+++|.++ ..|+||||+|+..|+.+++++|++.| ++++.++.. |.||+.. +..+++++
T Consensus 87 ~~Ll~~gadvn~~d------~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~-G~TpL~~A~~~g~~~iv~~ 154 (169)
T 4gpm_A 87 KLLISKGADVNAKD------SDGRTPLHHAAENGHKEVVKLLISKG-----ADVNTSDSD-GRTPLDLAREHGNEEVVKL 154 (169)
T ss_dssp HHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHCcCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCC-CCCHHHHHHHcCCHHHHHH
Confidence 99999999999987 69999999999999999999999999 556666666 7666554 46899999
Q ss_pred HHHcCC
Q 001972 742 AAQIGV 747 (988)
Q Consensus 742 Lle~~a 747 (988)
|++.||
T Consensus 155 Ll~~GA 160 (169)
T 4gpm_A 155 LEKQGG 160 (169)
T ss_dssp HHTC--
T ss_pred HHHCCC
Confidence 999997
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=6.8e-22 Score=200.60 Aligned_cols=127 Identities=26% Similarity=0.326 Sum_probs=114.5
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.++..+.. .++..|++.|++++.+|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+||..|
T Consensus 36 ~g~t~l~~a~~~~~~-~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g 114 (169)
T 4gpm_A 36 DGRTPLHHAAENGHK-EVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG 114 (169)
T ss_dssp TSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC
Confidence 345678888887744 4567788999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCC
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSS 714 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~ 714 (988)
+.++|++|+++|++++.++ ..|+||||+|+..|+.+++++|+++|++.
T Consensus 115 ~~~~v~~Ll~~gad~~~~d------~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 115 HKEVVKLLISKGADVNTSD------SDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CHHHHHHHHHcCCCccccC------CCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 9999999999999999887 69999999999999999999999999554
No 4
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.85 E-value=1.3e-20 Score=188.75 Aligned_cols=154 Identities=25% Similarity=0.248 Sum_probs=133.6
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.++.|+..+..+ +++.|++.|+++|..|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..
T Consensus 12 ~~~~~~l~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDD-EVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALF 90 (169)
T ss_dssp -CHHHHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CcccchHHHHHHcCCHH-HHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 34567788899887554 46778999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHhh
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALAA 735 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~~ 735 (988)
|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|+ +++..+.. |.+|. ..+.
T Consensus 91 ~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~-g~t~l~~A~~~~~ 158 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADVNAND------MEGHTPLHLAAMFGHLEIVEVLLKNGA-----DVNAQDKF-GKTAFDISIDNGN 158 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTT-SCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCC-CCCHHHHHHHhCC
Confidence 99999999999999999887 699999999999999999999999994 45555554 55544 4556
Q ss_pred HHHHHHHHHcC
Q 001972 736 EKANETAAQIG 746 (988)
Q Consensus 736 ~~~v~~Lle~~ 746 (988)
.++++.|++.|
T Consensus 159 ~~~~~~L~~~G 169 (169)
T 2y1l_E 159 EDLAEILQKLN 169 (169)
T ss_dssp HHHHHHHHTC-
T ss_pred HHHHHHHHHcC
Confidence 78888887654
No 5
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.84 E-value=4.9e-21 Score=208.18 Aligned_cols=170 Identities=21% Similarity=0.194 Sum_probs=129.7
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCH
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE 662 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~ 662 (988)
.+.|+.+........++..|++.|+++|..|.+|+||||+||..|+.++|++|+..|++++.++..|.||||+|+..++.
T Consensus 53 ~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~ 132 (269)
T 4b93_B 53 CHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHF 132 (269)
T ss_dssp ----------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChH
Confidence 34556565555555677889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHH----HHHhhHHH
Q 001972 663 ETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEKA 738 (988)
Q Consensus 663 eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta----a~~~~~~~ 738 (988)
+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.| ++++..+.. |.+| +..+..++
T Consensus 133 ~~~~~Ll~~g~~~n~~d------~~g~TpL~~A~~~g~~~~v~~Ll~~g-----advn~~~~~-g~t~Lh~A~~~g~~~~ 200 (269)
T 4b93_B 133 QVVKCLLDSNAKPNKKD------LSGNTPLIYACSGGHHELVALLLQHG-----ASINASNNK-GNTALHEAVIEKHVFV 200 (269)
T ss_dssp HHHHHHHHTTCCSCCCC------TTCCCHHHHHHHTTCGGGHHHHHHTT-----CCTTCBCTT-SCBHHHHHHHTTCHHH
T ss_pred HHHHHHHHCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCccccC-CCcHHHHHHHcCCHHH
Confidence 99999999999999887 69999999999999999999999999 455555555 5544 45567899
Q ss_pred HHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 739 NETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 739 v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
|+.|++.++ ++.. .+++.+|++.|..
T Consensus 201 v~~Ll~~Gad~~~~-------d~~G~TpL~~A~~ 227 (269)
T 4b93_B 201 VELLLLHGASVQVL-------NKRQRTAVDCAEQ 227 (269)
T ss_dssp HHHHHHTTCCSCCC-------CTTSCCSGGGSCT
T ss_pred HHHHHHCCCCCCCc-------CCCCCCHHHHHHh
Confidence 999999998 4433 3455667776643
No 6
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.84 E-value=1.1e-20 Score=187.76 Aligned_cols=157 Identities=17% Similarity=0.147 Sum_probs=132.1
Q ss_pred chhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHh
Q 001972 579 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 658 (988)
Q Consensus 579 ~~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~ 658 (988)
+...++.|+.++..+..+.+..++...+.+++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACS 84 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 34556788999988876665443333677888899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHH---hh
Q 001972 659 FGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL---AA 735 (988)
Q Consensus 659 ~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~---~~ 735 (988)
.|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++| .+++.++.. |.+|.+. +.
T Consensus 85 ~~~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~l~~a~~~~ 152 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVVNVAD------LWKFTPLHEAAAKGKYEICKLLLQHG-----ADPTKKNRD-GNTPLDLVKDGD 152 (165)
T ss_dssp TTCHHHHHHHHHTTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCTGGGSCTTC
T ss_pred cCcHHHHHHHHhCCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCcccCCC-CCChhHhHhcCC
Confidence 999999999999999999887 69999999999999999999999999 455555555 6655443 46
Q ss_pred HHHHHHHHHcCC
Q 001972 736 EKANETAAQIGV 747 (988)
Q Consensus 736 ~~~v~~Lle~~a 747 (988)
.+++++|++.++
T Consensus 153 ~~i~~~L~~~gA 164 (165)
T 3twr_A 153 TDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHHTC--
T ss_pred hHHHHHHhhccc
Confidence 788888887764
No 7
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.84 E-value=1.9e-20 Score=184.99 Aligned_cols=153 Identities=16% Similarity=0.206 Sum_probs=132.9
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.++..+..+ +++.|++.|+++|..|..|.||||+|+. |+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 5 ~~~~L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 82 (162)
T 1ihb_A 5 WGNELASAAARGDLE-QLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGF 82 (162)
T ss_dssp CHHHHHHHHHHTCHH-HHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HhhHHHHHHHcCCHH-HHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 356788888887554 4577889999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHH----HHHhhHH
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEK 737 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta----a~~~~~~ 737 (988)
.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++. ++..+.. |.+| +..+..+
T Consensus 83 ~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~~-g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 83 LDTLQTLLEFQADVNIED------NEGNLPLHLAAKEGHLRVVEFLVKHTASN----VGHRNHK-GDTACDLARLYGRNE 151 (162)
T ss_dssp HHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHSCCC----TTCCCTT-SCCHHHHHHHTTCHH
T ss_pred HHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHccCCC----CCCcCCC-CCcHHHHHHHcCCHH
Confidence 999999999999999887 69999999999999999999999999542 3445554 5544 4555789
Q ss_pred HHHHHHHcCC
Q 001972 738 ANETAAQIGV 747 (988)
Q Consensus 738 ~v~~Lle~~a 747 (988)
+++.|++.||
T Consensus 152 ~~~~Ll~~GA 161 (162)
T 1ihb_A 152 VVSLMQANGA 161 (162)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHhCC
Confidence 9999999885
No 8
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.84 E-value=5.7e-21 Score=194.97 Aligned_cols=155 Identities=17% Similarity=0.163 Sum_probs=133.5
Q ss_pred chhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHh
Q 001972 579 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 658 (988)
Q Consensus 579 ~~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~ 658 (988)
+....+.|+.|+..+..+ +++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 32 d~~g~t~L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 110 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMEN-AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSII 110 (192)
T ss_dssp CTTCCCHHHHHHHHTCGG-GHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHH-HHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 444567788888877443 4566778899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHh
Q 001972 659 FGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALA 734 (988)
Q Consensus 659 ~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~ 734 (988)
.|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.| ++++..+.. |.+|. ..+
T Consensus 111 ~~~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~l~~A~~~~ 178 (192)
T 2rfm_A 111 FGYSEMSYFLLEHGANVNDRN------LEGETPLIVASKYGRSEIVKKLLELG-----ADISARDLT-GLTAEASARIFG 178 (192)
T ss_dssp HTCHHHHHHHHHTTCCSSCCC------TTCCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCBCTT-SCBHHHHHHHTT
T ss_pred cCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCC-CCCHHHHHHHhC
Confidence 999999999999999999887 69999999999999999999999999 455555555 65554 445
Q ss_pred hHHHHHHHHHcC
Q 001972 735 AEKANETAAQIG 746 (988)
Q Consensus 735 ~~~~v~~Lle~~ 746 (988)
..++++.|++.+
T Consensus 179 ~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 179 RQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHhcc
Confidence 678888887754
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.83 E-value=3.2e-20 Score=184.90 Aligned_cols=152 Identities=19% Similarity=0.143 Sum_probs=132.8
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCH
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE 662 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~ 662 (988)
.+.|+.|+..+..+ +++.|++.|.++|..|..|.||||+|+..|+.+++++|++.|++++..|..|+||||+|+..|+.
T Consensus 4 ~t~L~~A~~~g~~~-~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (167)
T 3v31_A 4 SLSVHQLAAQGEML-YLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYT 82 (167)
T ss_dssp CCCHHHHHHTTCHH-HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cchHHHHHHCCCHH-HHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 34578888877655 45667888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhhHHH
Q 001972 663 ETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEKA 738 (988)
Q Consensus 663 eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~~~~ 738 (988)
+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|+ +++..+.. |. .|+..+..++
T Consensus 83 ~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~-g~t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 83 DIVKMLLDCGVDVNEYD------WNGGTPLLYAVHGNHVKCVKMLLESGA-----DPTIETDS-GYNSMDLAVALGYRSV 150 (167)
T ss_dssp HHHHHHHHHTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTT-SCCHHHHHHHHTCHHH
T ss_pred HHHHHHHHCCCCCCcCC------CCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCC-CCCHHHHHHHcCcHHH
Confidence 99999999999999887 699999999999999999999999994 44555554 55 4555667889
Q ss_pred HHHHHHcCC
Q 001972 739 NETAAQIGV 747 (988)
Q Consensus 739 v~~Lle~~a 747 (988)
++.|++.++
T Consensus 151 ~~~L~~~~~ 159 (167)
T 3v31_A 151 QQVIESHLL 159 (167)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999988764
No 10
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.83 E-value=2.8e-20 Score=199.47 Aligned_cols=159 Identities=20% Similarity=0.165 Sum_probs=137.7
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCC-------------------
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS------------------- 641 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gad------------------- 641 (988)
...+.|+.|+..+.. .+++.|+++|++++..|..|+||||+|+..|+.+++++|++.|++
T Consensus 44 ~g~t~L~~A~~~g~~-~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~ 122 (282)
T 1oy3_D 44 LGQTALHLAAILGEA-STVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122 (282)
T ss_dssp TSCCHHHHHHHHTCH-HHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC--------------
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcc
Confidence 345778989887744 466889999999999999999999999999999999999998765
Q ss_pred ----------------------------CCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHH
Q 001972 642 ----------------------------PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAAD 693 (988)
Q Consensus 642 ----------------------------vn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLh 693 (988)
++.+|..|+||||+|+..|+.++|++|+++|++++..++ ..|.||||
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-----~~g~tpL~ 197 (282)
T 1oy3_D 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP-----TCGRTPLH 197 (282)
T ss_dssp ---------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHH
T ss_pred hhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-----CCCcCHHH
Confidence 778899999999999999999999999999999998873 45999999
Q ss_pred HHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHh----hHHHHHHHHHcCC-CCCC
Q 001972 694 LASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKANETAAQIGV-QSDG 751 (988)
Q Consensus 694 lAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~----~~~~v~~Lle~~a-~~~~ 751 (988)
+|+..|+.+++++|+++| ++++.++.. |.+|+..+ ..++++.|++.++ ++..
T Consensus 198 ~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~-g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~ 254 (282)
T 1oy3_D 198 LAVEAQAASVLELLLKAG-----ADPTARMYG-GRTPLGSALLRPNPILARLLRAHGAPEPED 254 (282)
T ss_dssp HHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHTSSCHHHHHHHHHTTCCCCCC
T ss_pred HHHHcCCHHHHHHHHHcC-----CCCcccccC-CCCHHHHHHHcCCcHHHHHHHHcCCCcCcC
Confidence 999999999999999999 556666666 76666554 7899999999998 4443
No 11
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.83 E-value=8.9e-20 Score=190.56 Aligned_cols=173 Identities=19% Similarity=0.196 Sum_probs=145.9
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.|+.|+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 38 ~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 116 (231)
T 3aji_A 38 QDSRTALHWACSAGHT-EIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASK 116 (231)
T ss_dssp TTSCCHHHHHHHHTCH-HHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCcH-HHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 3445788989888744 456788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHhh
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALAA 735 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~~ 735 (988)
|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.| .+++..+.. |.+|+ ..+.
T Consensus 117 ~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~-g~t~L~~A~~~~~ 184 (231)
T 3aji_A 117 NRHEIAVMLLEGGANPDAKD------HYDATAMHRAAAKGNLKMVHILLFYK-----ASTNIQDTE-GNTPLHLACDEER 184 (231)
T ss_dssp TCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTT-SCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCCcC------CCCCcHHHHHHHcCCHHHHHHHHhcC-----CCccccCCC-CCCHHHHHHHCCC
Confidence 99999999999999998877 69999999999999999999999999 455555555 55554 4457
Q ss_pred HHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhhH
Q 001972 736 EKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAHA 772 (988)
Q Consensus 736 ~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~A 772 (988)
.++++.|++.++ ++.. ...+.+++..|...
T Consensus 185 ~~~v~~Ll~~ga~~~~~-------~~~g~t~l~~A~~~ 215 (231)
T 3aji_A 185 VEEAKFLVTQGASIYIE-------NKEEKTPLQVAKGG 215 (231)
T ss_dssp HHHHHHHHHTTCCSCCC-------CTTSCCHHHHSCHH
T ss_pred HHHHHHHHHCCCCCCCC-------CCCCCCHHHHHHhh
Confidence 899999999997 3332 34556677666543
No 12
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.83 E-value=1e-19 Score=183.79 Aligned_cols=150 Identities=21% Similarity=0.185 Sum_probs=130.3
Q ss_pred HHHHHHHhhhHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHH
Q 001972 585 LIQNLLRNRLCEWLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 663 (988)
Q Consensus 585 lL~~al~~~l~e~Lv~~Lle~-Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~e 663 (988)
.|+.++..+..+.+. .|++. +.+++..|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 8 ~l~~A~~~g~~~~v~-~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 86 (179)
T 3f6q_A 8 DIFTQCREGNAVAVR-LWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRD 86 (179)
T ss_dssp CHHHHHHHTCHHHHH-HHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHH-HHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHH
Confidence 366777777665554 45554 7889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHH----HHHhhHHHH
Q 001972 664 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEKAN 739 (988)
Q Consensus 664 iV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta----a~~~~~~~v 739 (988)
++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|+ +++..+.. |.+| ...+...++
T Consensus 87 ~v~~Ll~~g~~~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~ga-----~~~~~~~~-g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 87 IVQKLLQYKADINAVN------EHGNVPLHYACFWGQDQVAEDLVANGA-----LVSICNKY-GEMPVDKAKAPLRELLR 154 (179)
T ss_dssp HHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTC-----CSSBCCTT-SCCGGGGSCHHHHHHHH
T ss_pred HHHHHHHcCCCCCccC------CCCCCHHHHHHHcCCHHHHHHHHHCCC-----CcchhccC-CCCcHHHHHHHHHHHHH
Confidence 9999999999999887 699999999999999999999999994 45555555 5544 455677889
Q ss_pred HHHHHcCC
Q 001972 740 ETAAQIGV 747 (988)
Q Consensus 740 ~~Lle~~a 747 (988)
+.|++.++
T Consensus 155 ~~L~~~g~ 162 (179)
T 3f6q_A 155 ERAEKMGQ 162 (179)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhc
Confidence 99999997
No 13
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=6.1e-20 Score=180.68 Aligned_cols=146 Identities=24% Similarity=0.210 Sum_probs=125.2
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCH
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE 662 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~ 662 (988)
.+.|+.++..+..+ +++.|++.|++++ .|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 3 ~~~L~~A~~~g~~~-~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 80 (153)
T 1awc_B 3 GKKLLEAARAGQDD-EVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA 80 (153)
T ss_dssp HHHHHHHHHHTCHH-HHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred cHHHHHHHHcCCHH-HHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence 45677888877554 4567888899887 588999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHh----hHHH
Q 001972 663 ETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKA 738 (988)
Q Consensus 663 eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~----~~~~ 738 (988)
+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++| .+++..+.. |.+|...+ ..++
T Consensus 81 ~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~l~~A~~~~~~~i 148 (153)
T 1awc_B 81 NIVEVLLKHGADVNAKD------MLKMTALHWATEHNHQEVVELLIKYG-----ADVHTQSKF-CKTAFDISIDNGNEDL 148 (153)
T ss_dssp HHHHHHHTTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHH
T ss_pred HHHHHHHHcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCC-CCCHHHHHHHcCCHHH
Confidence 99999999999999887 69999999999999999999999999 555566665 66665554 4555
Q ss_pred HHHH
Q 001972 739 NETA 742 (988)
Q Consensus 739 v~~L 742 (988)
++.|
T Consensus 149 ~~~L 152 (153)
T 1awc_B 149 AEIL 152 (153)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5544
No 14
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.83 E-value=5.9e-20 Score=177.58 Aligned_cols=126 Identities=27% Similarity=0.293 Sum_probs=115.9
Q ss_pred chhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHh
Q 001972 579 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 658 (988)
Q Consensus 579 ~~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~ 658 (988)
.....+.|+.|+..+..+ +++.|++.|+++|..|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDD-EVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp -CHHHHHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred cccccHHHHHHHHhCCHH-HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 345678899999988555 5677899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcc
Q 001972 659 FGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 711 (988)
Q Consensus 659 ~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~G 711 (988)
.|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|
T Consensus 90 ~~~~~~v~~Ll~~g~~~~~~~------~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGADVNAQD------KFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCCCCcCcC------CCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999998887 69999999999999999999999976
No 15
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.83 E-value=6.7e-20 Score=199.08 Aligned_cols=178 Identities=19% Similarity=0.153 Sum_probs=145.8
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....++|+.|+..+..+ +++.|++.|+++|..|..|.||||+||..|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 38 ~~~~t~l~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~ 116 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTE-EVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASC 116 (299)
T ss_dssp ECHHHHHHHHHHHTCHH-HHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred cCCccHHHHHHHcCCHH-HHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHc
Confidence 34567899999888655 45678889999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCC------------------------------------------------------CCC
Q 001972 660 GREETVIMLVKLGAAPGAVEDPT------------------------------------------------------PAF 685 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~------------------------------------------------------~~d 685 (988)
|+.++|++|+++|++++..+... ..+
T Consensus 117 g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (299)
T 1s70_B 117 GYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHA 196 (299)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCT
T ss_pred CCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhc
Confidence 99999999999999998765210 133
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHH----HHHhhHHHHHHHHHcCC-CCCCCchhhhhhh
Q 001972 686 PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEKANETAAQIGV-QSDGPAAEQLSLR 760 (988)
Q Consensus 686 ~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta----a~~~~~~~v~~Lle~~a-~~~~~~~~~lslk 760 (988)
..|.||||+|+..|+.+++++|++.| .+++..+.. |.+| +..+..++++.|++.++ ++.. ..
T Consensus 197 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~d~~~~d~~-g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~-------d~ 263 (299)
T 1s70_B 197 KSGGTALHVAAAKGYTEVLKLLIQAR-----YDVNIKDYD-GWTPLHAAAHWGKEEACRILVENLCDMEAV-------NK 263 (299)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTT-----CCTTCCCTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-------CT
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHHcC-----CCCCCcCCC-CCcHHHHHHhcCCHHHHHHHHHcCCCCCCc-------CC
Confidence 57899999999999999999999999 455555555 5554 45557899999999997 3332 34
Q ss_pred hhhHHHhhhhh
Q 001972 761 GSLAAVRKSAH 771 (988)
Q Consensus 761 dsL~AvR~a~~ 771 (988)
.+.+++..|..
T Consensus 264 ~g~t~l~~A~~ 274 (299)
T 1s70_B 264 VGQTAFDVADE 274 (299)
T ss_dssp TSCCTTTSCCS
T ss_pred CCCCHHHHHHH
Confidence 55666766654
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.5e-19 Score=199.34 Aligned_cols=182 Identities=18% Similarity=0.131 Sum_probs=137.9
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.|+.|+..+.. .+++.|++.|+++|..|..|.||||+|+..|+.+++++|+++|++++..|..|+||||+|+..
T Consensus 56 ~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 134 (351)
T 3utm_A 56 GRKSTPLHLAAGYNRV-RIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASK 134 (351)
T ss_dssp TTCCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCH-HHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 3446788888887744 466778889999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccC------------------------------------------------------------
Q 001972 660 GREETVIMLVKLGAAPGAVE------------------------------------------------------------ 679 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~d------------------------------------------------------------ 679 (988)
|+.+++++|+++|++++..+
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~ 214 (351)
T 3utm_A 135 NRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETA 214 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCH
T ss_pred CCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCH
Confidence 99999999999888876532
Q ss_pred ------------------------CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHH
Q 001972 680 ------------------------DPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAA 731 (988)
Q Consensus 680 ------------------------d~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa 731 (988)
+++.+|..|.||||+|+..|+.+++++|+++| .+++..+.. |. .|+
T Consensus 215 L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~n~~d~~-g~t~L~~A~ 288 (351)
T 3utm_A 215 LHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHG-----AKMNALDSL-GQTALHRAA 288 (351)
T ss_dssp HHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHH
T ss_pred HHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCC-CCCHHHHHH
Confidence 22345678888888888888888888888888 444444444 54 444
Q ss_pred HHhhHHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhhHHHH
Q 001972 732 ALAAEKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAHAAAL 775 (988)
Q Consensus 732 ~~~~~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~AA~r 775 (988)
..++.++++.|++.++ ++.. ...+.+|+..|......
T Consensus 289 ~~~~~~~v~~Ll~~gad~~~~-------~~~g~tal~~a~~~~~~ 326 (351)
T 3utm_A 289 LAGHLQTCRLLLSYGSDPSII-------SLQGFTAAQMGNEAVQQ 326 (351)
T ss_dssp HHTCHHHHHHHHHTTCCTTCC-------CTTSCCHHHHSCHHHHH
T ss_pred HcCcHHHHHHHHHcCCCCCCc-------CCCCCChhhhhhHHHHH
Confidence 5557788888888886 3322 34455666666444433
No 17
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.82 E-value=8.7e-21 Score=187.82 Aligned_cols=139 Identities=23% Similarity=0.301 Sum_probs=114.3
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCc-HhhHHHh
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRT-ALHWASY 658 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~T-pLH~Aa~ 658 (988)
....+.|+.|+..+..+ +++.|++.|+++|..|..|+||||+|+ .|+.+++++|++.|++++.+|..|+| |||+|+.
T Consensus 10 ~~~~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~ 87 (156)
T 1bi7_B 10 EPSADWLATAAARGRVE-EVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAR 87 (156)
T ss_dssp CCSTTHHHHHHHHTCHH-HHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHH
T ss_pred ccchHHHHHHHHcCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHH
Confidence 33467789899887554 567788999999999999999999986 99999999999999999999999999 9999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHH
Q 001972 659 FGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAA 732 (988)
Q Consensus 659 ~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~ 732 (988)
.|+.++|++|+++|++++..+ ..|.||||+|+..|+.+++++|+++| ++++..+.. |.++..
T Consensus 88 ~~~~~~v~~Ll~~ga~~~~~d------~~g~tpl~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~~~ 149 (156)
T 1bi7_B 88 EGFLDTLVVLHRAGARLDVRD------AWGRLPVDLAEELGHRDVARYLRAAA-----GGTRGSNHA-RIDAAE 149 (156)
T ss_dssp HTCHHHHHHHHHHTCCSSCCC------TTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred CCCHHHHHHHHHcCCCCcccC------CCCCCHHHHHHHhCHHHHHHHHHHcC-----CCCCccCcC-cCcccc
Confidence 999999999999999999887 69999999999999999999999999 566666665 655544
No 18
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.82 E-value=1.2e-20 Score=182.60 Aligned_cols=122 Identities=25% Similarity=0.326 Sum_probs=89.7
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCC-CCcHhhHHHhcCC
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDAR-GRTALHWASYFGR 661 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~-G~TpLH~Aa~~G~ 661 (988)
.+.|+.++..+.. .+++.|++.|+++|..|..|+||||+|+. |+.+++++|+++|++++.+|.. |+||||+|+..|+
T Consensus 13 ~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~ 90 (136)
T 1d9s_A 13 DAGLATAAARGQV-ETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGF 90 (136)
T ss_dssp SCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTC
T ss_pred ccHHHHHHHcCCH-HHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCC
Confidence 4556767666643 34556667777777777777777777777 7777777777777777777777 7777777777777
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccC
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADL 712 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga 712 (988)
.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|+
T Consensus 91 ~~~v~~Ll~~ga~~~~~d------~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 91 LDTLVVLHRAGARLDVCD------AWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHHHTCCCCCCCS------SSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCCCCccC------CCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 777777777777777666 577777777777777777777777774
No 19
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.82 E-value=1.3e-19 Score=189.80 Aligned_cols=183 Identities=15% Similarity=0.092 Sum_probs=145.0
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCC-----CccCCCCCcHhhHH
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSP-----NFRDARGRTALHWA 656 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~-Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadv-----n~~D~~G~TpLH~A 656 (988)
.+.|+.|+..+..+. ++.|++. |+++|..|..|+||||+||..|+.+++++|++.|+++ +.+|..|+||||+|
T Consensus 4 ~t~L~~A~~~g~~~~-v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A 82 (232)
T 2rfa_A 4 ESPLLLAAKENDVQA-LSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIA 82 (232)
T ss_dssp TCHHHHHHHTTCHHH-HHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHH
T ss_pred CCHHHHHHHcCCHHH-HHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHH
Confidence 467888888885554 4566766 9999999999999999999999999999999999987 77888999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCccCC-------CCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHH
Q 001972 657 SYFGREETVIMLVKLGAAPGAVED-------PTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNV 729 (988)
Q Consensus 657 a~~G~~eiV~~LL~~GAd~n~~dd-------~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~t 729 (988)
+..|+.+++++|+++|++++..+. ++..|..|.||||+|+..|+.+++++|+++| ++++..+.. |.+
T Consensus 83 ~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~-g~t 156 (232)
T 2rfa_A 83 VINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-----ADIRAQDSL-GNT 156 (232)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTT-SCC
T ss_pred HHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCC-CCC
Confidence 999999999999999999988762 1122347999999999999999999999999 566666766 777
Q ss_pred HHHHh----hHHHH----HHHHHcCCCCCCCchhhhhhhhhhHHHhhhhhH
Q 001972 730 AAALA----AEKAN----ETAAQIGVQSDGPAAEQLSLRGSLAAVRKSAHA 772 (988)
Q Consensus 730 aa~~~----~~~~v----~~Lle~~a~~~~~~~~~lslkdsL~AvR~a~~A 772 (988)
|+..+ ..+++ +.|++.++......-.......+.++++.|...
T Consensus 157 ~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~ 207 (232)
T 2rfa_A 157 VLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVE 207 (232)
T ss_dssp HHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHc
Confidence 77665 45555 899999872111111123345667777766543
No 20
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=1.5e-19 Score=184.79 Aligned_cols=169 Identities=14% Similarity=0.099 Sum_probs=138.7
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHH
Q 001972 584 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 663 (988)
Q Consensus 584 ~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~e 663 (988)
+.|+.++..+..+.+..+|...+.++|..|..|.||||+|+..|+.++|++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 7 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 86 (201)
T 3hra_A 7 GALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTE 86 (201)
T ss_dssp THHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 45777888777776665555555699999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhh-------
Q 001972 664 TVIMLV-KLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA------- 735 (988)
Q Consensus 664 iV~~LL-~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~------- 735 (988)
++++|+ ..+++++..+ ..|.||||+|+..|+.+++++|++.|. .+++..+.. |.+|+..+.
T Consensus 87 ~~~~Ll~~~~~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~~-g~t~L~~A~~~~~~~~ 155 (201)
T 3hra_A 87 ILAYMLKHATPDLNKHN------RYGGNALIPAAEKGHIDNVKLLLEDGR----EDIDFQNDF-GYTALIEAVGLREGNQ 155 (201)
T ss_dssp HHHHHHHHSCCCTTCCC------TTSCCSHHHHHHTTCHHHHHHHHHHCC----CCTTCCCTT-SCCHHHHHHHSSCCSH
T ss_pred HHHHHHhccCccccccc------CCCCcHHHHHHHcCCHHHHHHHHHcCC----CCcCCCCCC-CCCHHHHHHHhccchh
Confidence 999999 5667888776 689999999999999999999999982 345556666 777777765
Q ss_pred --HHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhh
Q 001972 736 --EKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSA 770 (988)
Q Consensus 736 --~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~ 770 (988)
.++++.|++.++ ++.. ...+.++++.|.
T Consensus 156 ~~~~~v~~Ll~~ga~~~~~-------~~~g~t~l~~A~ 186 (201)
T 3hra_A 156 LYQDIVKLLMENGADQSIK-------DNSGRTAMDYAN 186 (201)
T ss_dssp HHHHHHHHHHHTTCCTTCC-------CTTSCCHHHHHH
T ss_pred hHHHHHHHHHHCCCCCCcc-------CCCCCCHHHHHH
Confidence 899999999997 4332 234455655543
No 21
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.82 E-value=5.1e-20 Score=178.03 Aligned_cols=129 Identities=18% Similarity=0.217 Sum_probs=116.1
Q ss_pred CCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCC
Q 001972 606 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAF 685 (988)
Q Consensus 606 Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d 685 (988)
++++|..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+. |+.+++++|+++|++++..+
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~------ 74 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCAD------ 74 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCB------
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcC------
Confidence 67899999999999999999999999999999999999999999999999999 99999999999999999988
Q ss_pred CC-CCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHhhHHHHHHHHHcCC
Q 001972 686 PG-GQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALAAEKANETAAQIGV 747 (988)
Q Consensus 686 ~~-G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~~~~~v~~Lle~~a 747 (988)
.. |.||||+|+..|+.+++++|++.| .+++..+.. |.+|. ..+..++++.|++.++
T Consensus 75 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~-g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 75 PATLTRPVHDAAREGFLDTLVVLHRAG-----ARLDVCDAW-GRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTC-----CCCCCCSSS-SSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 57 999999999999999999999999 455555555 55554 4557889999988774
No 22
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.82 E-value=1.2e-19 Score=193.69 Aligned_cols=154 Identities=17% Similarity=0.128 Sum_probs=133.2
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCC-CCCccCCCCCcHhhHHHhc
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV-SPNFRDARGRTALHWASYF 659 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Ga-dvn~~D~~G~TpLH~Aa~~ 659 (988)
...+.|+.|+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|+ +++.+|..|+||||+|+..
T Consensus 56 ~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 134 (253)
T 1yyh_A 56 TGETALHLAARYSRS-DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARL 134 (253)
T ss_dssp TSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHc
Confidence 345678888887754 45678889999999999999999999999999999999999987 8999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHH----HHHHhh
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNV----AAALAA 735 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~t----aa~~~~ 735 (988)
|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|+ +++..+.. |.+ |+..+.
T Consensus 135 ~~~~~v~~Ll~~g~~~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~ga-----~~~~~~~~-g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 135 AVEGMLEDLINSHADVNAVD------DLGKSALHWAAAVNNVDAAVVLLKNGA-----NKDMQNNR-EETPLFLAAREGS 202 (253)
T ss_dssp TCSSHHHHHHHTTCCTTCBC------TTSCBHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTT-SCCHHHHHHHHTC
T ss_pred ChHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCC-CCCHHHHHHHCCC
Confidence 99999999999999999887 689999999999999999999999994 45555554 554 445567
Q ss_pred HHHHHHHHHcCC
Q 001972 736 EKANETAAQIGV 747 (988)
Q Consensus 736 ~~~v~~Lle~~a 747 (988)
.++++.|++.++
T Consensus 203 ~~~v~~Ll~~ga 214 (253)
T 1yyh_A 203 YETAKVLLDHFA 214 (253)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 899999999997
No 23
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.82 E-value=8.9e-20 Score=182.55 Aligned_cols=150 Identities=21% Similarity=0.160 Sum_probs=128.5
Q ss_pred HHHHHHHhhhHHHHHHHHHhCCCC-CCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHH
Q 001972 585 LIQNLLRNRLCEWLVWKIHEGGKG-PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 663 (988)
Q Consensus 585 lL~~al~~~l~e~Lv~~Lle~Gad-~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~e 663 (988)
.|+.++..+..+.+ +.|++.|.+ ++..|..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 5 ~L~~A~~~g~~~~v-~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (172)
T 3v30_A 5 SIHQLAAQGELDQL-KEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTD 83 (172)
T ss_dssp CHHHHHHTTCHHHH-HHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred hHHHHHHcCCHHHH-HHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHH
Confidence 46777777766544 556677766 8889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhhHHHH
Q 001972 664 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEKAN 739 (988)
Q Consensus 664 iV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~~~~v 739 (988)
++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.| ++++..+.. |. .|+..+..+++
T Consensus 84 ~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~l~~A~~~~~~~~~ 151 (172)
T 3v30_A 84 IVGLLLERDVDINIYD------WNGGTPLLYAVRGNHVKCVEALLARG-----ADLTTEADS-GYTPMDLAVALGYRKVQ 151 (172)
T ss_dssp HHHHHHTTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccccCCC-CCCHHHHHHHhCcHHHH
Confidence 9999999999998887 69999999999999999999999999 445555554 55 44555678899
Q ss_pred HHHHHcCC
Q 001972 740 ETAAQIGV 747 (988)
Q Consensus 740 ~~Lle~~a 747 (988)
+.|++.++
T Consensus 152 ~~L~~~~~ 159 (172)
T 3v30_A 152 QVIENHIL 159 (172)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998876
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.81 E-value=7.8e-20 Score=196.01 Aligned_cols=183 Identities=17% Similarity=0.149 Sum_probs=143.2
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCC---CCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHH
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKG---PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWA 656 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad---~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~A 656 (988)
....+.||.|+..+..+ +++.|++.|++ +|..|..|+||||+||..|+.++|++|+++|++++.+|..|+||||+|
T Consensus 7 ~~g~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A 85 (282)
T 1oy3_D 7 EDGDTALHLAVIHQHEP-FLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLA 85 (282)
T ss_dssp TTCCCHHHHHHHTTCHH-HHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHcCCHH-HHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34457899999887554 56778888888 788999999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCccC-----------------------------------------CCCCCCCCCCcHHHHH
Q 001972 657 SYFGREETVIMLVKLGAAPGAVE-----------------------------------------DPTPAFPGGQTAADLA 695 (988)
Q Consensus 657 a~~G~~eiV~~LL~~GAd~n~~d-----------------------------------------d~~~~d~~G~TPLhlA 695 (988)
+..|+.+++++|+++|++..... +++..|..|.||||+|
T Consensus 86 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 165 (282)
T 1oy3_D 86 CRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVA 165 (282)
T ss_dssp TTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHH
T ss_pred HHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHH
Confidence 99999999999999987632110 1234557999999999
Q ss_pred HHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhhHHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 696 SSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 696 a~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
+..|+.+++++|+++|++.+..+....... ...|+..+..++|+.|++.++ ++.. ...+.++++.|..
T Consensus 166 ~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tp-L~~A~~~~~~~~v~~Ll~~gad~~~~-------d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 166 VIHKDAEMVRLLRDAGADLNKPEPTCGRTP-LHLAVEAQAASVLELLLKAGADPTAR-------MYGGRTPLGSALL 234 (282)
T ss_dssp HHTTCHHHHHHHHHHTCCTTCCCTTTCCCH-HHHHHHTTCHHHHHHHHHTTCCTTCC-------CTTSCCHHHHHHT
T ss_pred HHcCCHHHHHHHHHcCCCCCCCCCCCCcCH-HHHHHHcCCHHHHHHHHHcCCCCccc-------ccCCCCHHHHHHH
Confidence 999999999999999955443332111111 335556667899999999997 4333 3445566666543
No 25
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.81 E-value=4.2e-20 Score=196.90 Aligned_cols=184 Identities=18% Similarity=0.131 Sum_probs=143.5
Q ss_pred hHHHHHHHHhhhHH---HHHHHHHhCCCCCCc----cCCCCCcHHHHHHHc---CChhhhHHHHhCCCCCCcc-------
Q 001972 583 DKLIQNLLRNRLCE---WLVWKIHEGGKGPNV----IDDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFR------- 645 (988)
Q Consensus 583 ~~lL~~al~~~l~e---~Lv~~Lle~Gad~n~----~D~~G~TpLH~AA~~---G~~~iV~~LL~~Gadvn~~------- 645 (988)
.+.|+.|+..+..+ .+++.|++.|+++|. .|..|+||||+||.. |+.++|++|++.|++++..
T Consensus 3 ~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 82 (256)
T 2etb_A 3 RDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQ 82 (256)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCC
T ss_pred ccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccc
Confidence 46788888776654 577888889999998 899999999999999 9999999999999887743
Q ss_pred ----CCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCC-------CCCCCCCCcHHHHHHHcCcHHHHHHHHH---cc
Q 001972 646 ----DARGRTALHWASYFGREETVIMLVKLGAAPGAVEDP-------TPAFPGGQTAADLASSRGHKGIAGYLAE---AD 711 (988)
Q Consensus 646 ----D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~-------~~~d~~G~TPLhlAa~~G~~eiv~~Lle---~G 711 (988)
|..|+||||+|+..|+.++|++|+++|++++..+.. ...|..|.||||+|+..|+.+++++|++ .|
T Consensus 83 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g 162 (256)
T 2etb_A 83 CTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP 162 (256)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 377999999999999999999999999999988730 0011239999999999999999999999 88
Q ss_pred CCCCCCCCccccCcchHHHHHHhhH------H-------HHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhhH
Q 001972 712 LSSHLSSLTVNENGMDNVAAALAAE------K-------ANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAHA 772 (988)
Q Consensus 712 a~~~~~~l~~~d~~~g~taa~~~~~------~-------~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~A 772 (988)
++++..+.. |.+|+..+.. + +++.|++.++ ......-.......+.++++.|...
T Consensus 163 -----a~~n~~d~~-g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~ 231 (256)
T 2etb_A 163 -----ASLEATDSL-GNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKE 231 (256)
T ss_dssp -----CCTTCCCTT-SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred -----CCcCccCCC-CCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHh
Confidence 566677776 8777766543 3 8999999987 3111000022244566677665543
No 26
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.81 E-value=2.2e-19 Score=192.80 Aligned_cols=150 Identities=16% Similarity=0.084 Sum_probs=106.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHH
Q 001972 584 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 663 (988)
Q Consensus 584 ~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~e 663 (988)
+.|+.|+..+..+ +++.|++.|+++|..|..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 5 t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 83 (261)
T 2xai_A 5 SPMHEAAIHGHQL-SLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWD 83 (261)
T ss_dssp CHHHHHHHHTCHH-HHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CHHHHHHHcCCHH-HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 4566676666443 446667777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHH----HHHHhhHHHH
Q 001972 664 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNV----AAALAAEKAN 739 (988)
Q Consensus 664 iV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~t----aa~~~~~~~v 739 (988)
++++|+++|++++..+ .|.||||+|+..|+.+++++|++.| .+++..+.. |.+ |+..+..+++
T Consensus 84 ~v~~Ll~~g~~~~~~~-------~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~-g~t~L~~A~~~~~~~~v 150 (261)
T 2xai_A 84 CVNLLLQHGASVQPES-------DLASPIHEAARRGHVECVNSLIAYG-----GNIDHKISH-LGTPLYLACENQQRACV 150 (261)
T ss_dssp HHHHHHHTTCCSSCSC-------TTCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCBTT-TBCHHHHHHHTTCHHHH
T ss_pred HHHHHHHCCCCCCCCC-------CCCCHHHHHHHcCcHHHHHHHHHcC-----CCCCcCCCC-CCCHHHHHHHhCCHHHH
Confidence 7777777777776533 5777777777777777777777777 344444443 443 3444456777
Q ss_pred HHHHHcCC
Q 001972 740 ETAAQIGV 747 (988)
Q Consensus 740 ~~Lle~~a 747 (988)
+.|++.++
T Consensus 151 ~~Ll~~g~ 158 (261)
T 2xai_A 151 KKLLESGA 158 (261)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 77777776
No 27
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.81 E-value=4.6e-19 Score=184.15 Aligned_cols=155 Identities=17% Similarity=0.132 Sum_probs=132.0
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCC-CCCccCCCCCcHhhHHHh
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV-SPNFRDARGRTALHWASY 658 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Ga-dvn~~D~~G~TpLH~Aa~ 658 (988)
....+.|+.|+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|+ +++..|..|+||||+|+.
T Consensus 23 ~~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 23 RTGETALHLAARYSRS-DAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp TTCCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCCCchHHHHHHcCCH-HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 3456788888887754 45677888999999999999999999999999999999999887 889999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHh
Q 001972 659 FGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALA 734 (988)
Q Consensus 659 ~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~ 734 (988)
.|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|+ +++..+.. |. .|+..+
T Consensus 102 ~~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~-g~t~L~~A~~~~ 169 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADVNAVD------DLGKSALHWAAAVNNVDAAVVLLKNGA-----NKDMQNNR-EETPLFLAAREG 169 (223)
T ss_dssp HTCHHHHHHHHHTTCCTTCBC------TTSCBHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTT-CCCHHHHHHHHT
T ss_pred hCcHHHHHHHHHcCCCCcCcC------CCCCcHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCC-CcCHHHHHHHcC
Confidence 999999999999999998887 689999999999999999999999994 44444444 54 445556
Q ss_pred hHHHHHHHHHcCC
Q 001972 735 AEKANETAAQIGV 747 (988)
Q Consensus 735 ~~~~v~~Lle~~a 747 (988)
..++++.|++.++
T Consensus 170 ~~~~v~~Ll~~ga 182 (223)
T 2f8y_A 170 SYETAKVLLDHFA 182 (223)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 7899999999987
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.80 E-value=4.9e-20 Score=200.27 Aligned_cols=143 Identities=21% Similarity=0.194 Sum_probs=130.3
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.|+.|+..+.. .+++.|++.|++++..+..|.||||+|+..|+.+++++|++.|+++|.+|..|+||||+||..
T Consensus 84 ~~G~TpLh~A~~~g~~-~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 84 QDGSSPLHVAALHGRA-DLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp TTSCCHHHHHHHTTCT-THHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCcH-HHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 3446789999987744 466888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhh
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA 735 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~ 735 (988)
|+.++|++|+++|+++|..+ ..|.||||+|+..|+.++|++|+++| ++++.++.. |.||+.++.
T Consensus 163 g~~~~v~~Ll~~gadvn~~~------~~g~t~Lh~A~~~g~~~~v~~Ll~~G-----ad~~~~d~~-G~TpL~~A~ 226 (269)
T 4b93_B 163 GHHELVALLLQHGASINASN------NKGNTALHEAVIEKHVFVVELLLLHG-----ASVQVLNKR-QRTAVDCAE 226 (269)
T ss_dssp TCGGGHHHHHHTTCCTTCBC------TTSCBHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTT-SCCSGGGSC
T ss_pred CCHHHHHHHHHCCCCCCccc------cCCCcHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCC-CCCHHHHHH
Confidence 99999999999999999988 69999999999999999999999999 667777777 888887763
No 29
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.80 E-value=2.4e-19 Score=187.25 Aligned_cols=154 Identities=18% Similarity=0.168 Sum_probs=135.6
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..
T Consensus 71 ~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 71 DAGWSPLHIAASAGXD-EIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp TTSCCHHHHHHHHTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCCCHHHHHHHcCHH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 3445788989887754 466889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHh----h
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----A 735 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~----~ 735 (988)
|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++| ++++.++.. |.+|...+ .
T Consensus 150 ~~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~l~~A~~~~~ 217 (231)
T 3aji_A 150 GNLKMVHILLFYKASTNIQD------TEGNTPLHLACDEERVEEAKFLVTQG-----ASIYIENKE-EKTPLQVAKGGLG 217 (231)
T ss_dssp TCHHHHHHHHHTTCCSCCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT-----CCSCCCCTT-SCCHHHHSCHHHH
T ss_pred CCHHHHHHHHhcCCCccccC------CCCCCHHHHHHHCCCHHHHHHHHHCC-----CCCCCCCCC-CCCHHHHHHhhHH
Confidence 99999999999999999887 69999999999999999999999999 566667776 77777665 4
Q ss_pred HHHHHHHHHcC
Q 001972 736 EKANETAAQIG 746 (988)
Q Consensus 736 ~~~v~~Lle~~ 746 (988)
..+++.|.+.+
T Consensus 218 ~~i~~lL~~~~ 228 (231)
T 3aji_A 218 LILKRLAEGEE 228 (231)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHcccc
Confidence 56667776654
No 30
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.80 E-value=3e-19 Score=200.42 Aligned_cols=179 Identities=21% Similarity=0.251 Sum_probs=137.5
Q ss_pred chhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCc--------------
Q 001972 579 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNF-------------- 644 (988)
Q Consensus 579 ~~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~-------------- 644 (988)
+....+.|+.|+..+..+ +++.|++.|+++|..|..|.||||+||..|+.++|++|++.|++++.
T Consensus 17 d~~g~t~L~~Aa~~g~~~-~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 17 DDENMEKIHVAARKGQTD-EVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMAN 95 (364)
T ss_dssp CHHHHHHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHTT
T ss_pred CCCCCCHHHHHHHcCCHH-HHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHcC
Confidence 445567788887777443 45667778888888888888888888888888888888887776665
Q ss_pred --------------------------------------cCCCCCcHhhHHHhcC--CHHHHHHHHHcCCCCCccCCCCCC
Q 001972 645 --------------------------------------RDARGRTALHWASYFG--REETVIMLVKLGAAPGAVEDPTPA 684 (988)
Q Consensus 645 --------------------------------------~D~~G~TpLH~Aa~~G--~~eiV~~LL~~GAd~n~~dd~~~~ 684 (988)
.|..|+||||+|+..| +.++|++|+++|++++..+
T Consensus 96 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d----- 170 (364)
T 3ljn_A 96 KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKD----- 170 (364)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCC-----
T ss_pred CHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccC-----
Confidence 7778899999999999 9999999999999998877
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhhHHHHHHHHHcCC-CCCCCchhhhhh
Q 001972 685 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEKANETAAQIGV-QSDGPAAEQLSL 759 (988)
Q Consensus 685 d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~~~~v~~Lle~~a-~~~~~~~~~lsl 759 (988)
..|.||||+|+..|+.+++++|++.|++....+++..+.. |. .|+..++.++|+.|++.++ ++.. .
T Consensus 171 -~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~-------d 241 (364)
T 3ljn_A 171 -KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ-GNSHLHWAILINWEDVAMRFVEMGIDVNME-------D 241 (364)
T ss_dssp -TTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTT-CCCTTHHHHTTTCHHHHHHHHTTTCCTTCC-------C
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCC-------C
Confidence 6899999999999999999999999977554556666655 55 4555567899999999987 3332 3
Q ss_pred hhhhHHHhhhhhH
Q 001972 760 RGSLAAVRKSAHA 772 (988)
Q Consensus 760 kdsL~AvR~a~~A 772 (988)
..+.++++.|+..
T Consensus 242 ~~g~tpL~~A~~~ 254 (364)
T 3ljn_A 242 NEHTVPLYLSVRA 254 (364)
T ss_dssp TTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHh
Confidence 4455666655443
No 31
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.80 E-value=4.5e-19 Score=174.33 Aligned_cols=148 Identities=18% Similarity=0.232 Sum_probs=124.9
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhC-CCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEG-GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~-Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
.+.|+.|+..+..+.+ +.|++. +.+++..|..|.||||+ |..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v-~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEV-RRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHH-HHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHH-HHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 4668888888766655 445555 56999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHH----HhhHH
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAA----LAAEK 737 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~----~~~~~ 737 (988)
.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++. + +++..+.. |.+|.. .+..+
T Consensus 81 ~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~-~-----~~~~~~~~-g~t~l~~A~~~~~~~ 147 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPD------GTGALPIHLAVQEGHTAVVSFLAAE-S-----DLHRRDAR-GLTPLELALQRGAQD 147 (156)
T ss_dssp HHHHHHHHHTTCCSCCCC------TTSCCHHHHHHHHTCHHHHHHHHTT-S-----CTTCCCTT-SCCHHHHHHHSCCHH
T ss_pred HHHHHHHHHcCCCCCCcC------CCCCcHHHHHHHhChHHHHHHHHhc-c-----CCCCcCCC-CCCHHHHHHHcCcHH
Confidence 999999999999999887 6999999999999999999999986 3 44455554 555554 45678
Q ss_pred HHHHHHHc
Q 001972 738 ANETAAQI 745 (988)
Q Consensus 738 ~v~~Lle~ 745 (988)
+++.|+++
T Consensus 148 ~v~~Ll~~ 155 (156)
T 1bd8_A 148 LVDILQGH 155 (156)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHhh
Confidence 88888754
No 32
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.80 E-value=1e-19 Score=175.74 Aligned_cols=127 Identities=20% Similarity=0.243 Sum_probs=110.3
Q ss_pred CCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCC
Q 001972 606 GKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAF 685 (988)
Q Consensus 606 Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d 685 (988)
|+|+ .+|..|.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..+
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~------ 73 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTG------ 73 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcC------
Confidence 6777 689999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhhHHHHHHHHHc
Q 001972 686 PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQI 745 (988)
Q Consensus 686 ~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~~~~v~~Lle~ 745 (988)
..|.||||+|+..|+.+++++|++.| ++++..+.. |.+|.+.+.......++..
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~tpl~~A~~~~~~~~l~~ 127 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLSYG-----ASRNAVNIF-GLRPVDYTDDESMKSLLLL 127 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCGGGGCCCHHHHHHHSC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCC-CCCHHHHHhhccHHHHHhh
Confidence 68999999999999999999999999 566677776 8888877766555555443
No 33
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.80 E-value=3.4e-19 Score=167.50 Aligned_cols=123 Identities=32% Similarity=0.392 Sum_probs=113.5
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHH
Q 001972 584 KLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREE 663 (988)
Q Consensus 584 ~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~e 663 (988)
+.|+.++..+..+ +++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.+
T Consensus 4 t~L~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~ 82 (126)
T 1n0r_A 4 TPLHLAARNGHLE-VVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLE 82 (126)
T ss_dssp CHHHHHHHHTCHH-HHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred cHHHHHHHcCcHH-HHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHH
Confidence 5678888777544 557788889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCC
Q 001972 664 TVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS 713 (988)
Q Consensus 664 iV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~ 713 (988)
++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++
T Consensus 83 ~~~~Ll~~g~~~~~~~------~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 83 VVKLLLEAGADVNAKD------KNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHHHcCCCCcccC------CCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 9999999999998877 6999999999999999999999999953
No 34
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.80 E-value=3.3e-19 Score=186.66 Aligned_cols=160 Identities=21% Similarity=0.151 Sum_probs=136.3
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCC-----CccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCC-------
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGP-----NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA------- 647 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~-----n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~------- 647 (988)
....+.|+.|+..+.. .+++.|++.|+++ +..|..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 35 ~~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 113 (232)
T 2rfa_A 35 AMGETALHIAALYDNL-EAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYR 113 (232)
T ss_dssp TTSCCHHHHHHHTTCH-HHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCC
T ss_pred CCCCCHHHHHHHcCCH-HHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeec
Confidence 3445789999988744 4567788889887 67788999999999999999999999999999999876
Q ss_pred ------CCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHH----HHHHHccCCCCCC
Q 001972 648 ------RGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIA----GYLAEADLSSHLS 717 (988)
Q Consensus 648 ------~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv----~~Lle~Ga~~~~~ 717 (988)
.|+||||+|+..|+.++|++|+++|++++.+| ..|.||||+|+..|+.+++ ++|++.|++....
T Consensus 114 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d------~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~ 187 (232)
T 2rfa_A 114 PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQD------SLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLK 187 (232)
T ss_dssp TTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSC
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhh
Confidence 79999999999999999999999999999987 6999999999999999988 9999999766543
Q ss_pred CC-ccccCcchHHH----HHHhhHHHHHHHHHcCC
Q 001972 718 SL-TVNENGMDNVA----AALAAEKANETAAQIGV 747 (988)
Q Consensus 718 ~l-~~~d~~~g~ta----a~~~~~~~v~~Lle~~a 747 (988)
.+ +..+.. |.+| +..++.++++.|+++++
T Consensus 188 ~~~~~~~~~-g~tpl~~A~~~g~~~~v~~Ll~~g~ 221 (232)
T 2rfa_A 188 SLELVPNNQ-GLTPFKLAGVEGNIVMFQHLMQKRK 221 (232)
T ss_dssp CGGGCCCTT-SCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hhhccCCCC-CCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 33 355555 6655 45557899999999885
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.80 E-value=3.9e-19 Score=189.76 Aligned_cols=153 Identities=17% Similarity=0.153 Sum_probs=132.0
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCC-CCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGK-GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Ga-d~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
...+.|+.++..+.. .+++.|++.|. +++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 89 ~g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 167 (253)
T 1yyh_A 89 MGRTPLHAAVSADAQ-GVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 167 (253)
T ss_dssp TSCCHHHHHHHHTCH-HHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHH
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 345778888887754 45677888887 9999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHH----HHHhh
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAA 735 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta----a~~~~ 735 (988)
|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++| ++++.++.. |.+| ...++
T Consensus 168 ~~~~~v~~Ll~~ga~~~~~~------~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~-g~tpl~~A~~~g~ 235 (253)
T 1yyh_A 168 NNVDAAVVLLKNGANKDMQN------NREETPLFLAAREGSYETAKVLLDHF-----ANRDITDHM-DRLPRDIAQERMH 235 (253)
T ss_dssp TCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTT-CCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHCCCHHHHHHHHHcC-----CCccccccC-CCCHHHHHHHcCC
Confidence 99999999999999999887 69999999999999999999999999 555566665 6655 45557
Q ss_pred HHHHHHHHHcC
Q 001972 736 EKANETAAQIG 746 (988)
Q Consensus 736 ~~~v~~Lle~~ 746 (988)
.+++++|....
T Consensus 236 ~~i~~~l~~~~ 246 (253)
T 1yyh_A 236 HDIVRLLDLEH 246 (253)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHHh
Confidence 78888886654
No 36
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.80 E-value=7.5e-19 Score=193.82 Aligned_cols=132 Identities=20% Similarity=0.181 Sum_probs=121.1
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.|+.++..+..+.+..+|...+.+++..|..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|+..
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 101 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSY 101 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHC
Confidence 34567788889888888777777777999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCC
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLS 717 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~ 717 (988)
|+.++|++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++....
T Consensus 102 g~~~iv~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 153 (351)
T 3utm_A 102 GHYEVTELLLKHGACVNAMD------LWQFTPLHEAASKNRVEVCSLLLSHGADPTLV 153 (351)
T ss_dssp TCHHHHHHHHHTTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCHHHHHHHHHCCCCCCCCC------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 99999999999999999887 69999999999999999999999999765543
No 37
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.79 E-value=7.3e-19 Score=179.65 Aligned_cols=153 Identities=17% Similarity=0.099 Sum_probs=133.0
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHH-hCCCCCCccCCCCCcHhhHHHhc
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPII-ATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL-~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
...+.|+.|+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|+ ..+++++..|..|.||||+|+..
T Consensus 38 ~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 116 (201)
T 3hra_A 38 EGNTPLNIAVHNNDI-EIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEK 116 (201)
T ss_dssp TSCCHHHHHHHHTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHT
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHc
Confidence 345789999987754 4678899999999999999999999999999999999999 67889999999999999999999
Q ss_pred CCHHHHHHHHHcC-CCCCccCCCCCCCCCCCcHHHHHHHcCc-----HHHHHHHHHccCCCCCCCCccccCcchHHH---
Q 001972 660 GREETVIMLVKLG-AAPGAVEDPTPAFPGGQTAADLASSRGH-----KGIAGYLAEADLSSHLSSLTVNENGMDNVA--- 730 (988)
Q Consensus 660 G~~eiV~~LL~~G-Ad~n~~dd~~~~d~~G~TPLhlAa~~G~-----~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta--- 730 (988)
|+.+++++|+++| ++++..+ ..|.||||+|+..|. .+++++|++.| ++++..+.. |.+|
T Consensus 117 ~~~~~v~~Ll~~g~~~~~~~~------~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~l~~ 184 (201)
T 3hra_A 117 GHIDNVKLLLEDGREDIDFQN------DFGYTALIEAVGLREGNQLYQDIVKLLMENG-----ADQSIKDNS-GRTAMDY 184 (201)
T ss_dssp TCHHHHHHHHHHCCCCTTCCC------TTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT-----CCTTCCCTT-SCCHHHH
T ss_pred CCHHHHHHHHHcCCCCcCCCC------CCCCCHHHHHHHhccchhhHHHHHHHHHHCC-----CCCCccCCC-CCCHHHH
Confidence 9999999999999 8888887 699999999999987 99999999999 455555555 5544
Q ss_pred -HHHhhHHHHHHHHHcC
Q 001972 731 -AALAAEKANETAAQIG 746 (988)
Q Consensus 731 -a~~~~~~~v~~Lle~~ 746 (988)
+..+..++++.|++.|
T Consensus 185 A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 185 ANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHTCHHHHHHHHTCC
T ss_pred HHHcCCHhHHHHHHhcC
Confidence 4555788899888764
No 38
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.79 E-value=1.2e-19 Score=191.11 Aligned_cols=156 Identities=20% Similarity=0.198 Sum_probs=135.3
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCC------CCccCCCCCcHh
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVS------PNFRDARGRTAL 653 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gad------vn~~D~~G~TpL 653 (988)
....+.|+.|+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|+..|++ ++..|..|+|||
T Consensus 43 ~~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L 121 (236)
T 1ikn_D 43 NLQQTPLHLAVITNQP-EIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCL 121 (236)
T ss_dssp TTCCCHHHHHHHTTCH-HHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHH
T ss_pred CCCCCHHHHHHHcCCH-HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHH
Confidence 3456789999988744 466788999999999999999999999999999999999999986 567888999999
Q ss_pred hHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHH-
Q 001972 654 HWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAA- 732 (988)
Q Consensus 654 H~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~- 732 (988)
|+|+..|+.++|++|+++|++++..+. ..|.||||+|+..|+.+++++|+++| ++++..+.. |.+|..
T Consensus 122 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~-----~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~tpl~~ 190 (236)
T 1ikn_D 122 HLASIHGYLGIVELLVSLGADVNAQEP-----CNGRTALHLAVDLQNPDLVSLLLKCG-----ADVNRVTYQ-GYSPYQL 190 (236)
T ss_dssp HHHHHTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHHHHHHTTCHHHHHHHHTTT-----CCSCCCCTT-CCCGGGG
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCCC-----CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCcccCC-CCCHHHH
Confidence 999999999999999999999998872 38999999999999999999999999 455555555 655544
Q ss_pred ---HhhHHHHHHHHHcCC
Q 001972 733 ---LAAEKANETAAQIGV 747 (988)
Q Consensus 733 ---~~~~~~v~~Lle~~a 747 (988)
.+..++++.|++.++
T Consensus 191 A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 191 TWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp CTTSSCHHHHHHHHTTSC
T ss_pred HHccCchHHHHHHHHcch
Confidence 457899999999998
No 39
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.79 E-value=7.9e-19 Score=182.36 Aligned_cols=153 Identities=18% Similarity=0.185 Sum_probs=134.0
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCC-CCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGK-GPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Ga-d~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
..+.|+.++..+..+ +++.|++.+. +++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 58 g~t~L~~A~~~~~~~-~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 136 (223)
T 2f8y_A 58 GRTPLHAAVSADAQG-VFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN 136 (223)
T ss_dssp SCCHHHHHHHTTCHH-HHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHH-HHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC
Confidence 456788888877444 5677777776 89999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhhH
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAE 736 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~~ 736 (988)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|+ +++..+.. |. .|...++.
T Consensus 137 ~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~ga-----~~~~~~~~-g~t~l~~A~~~~~~ 204 (223)
T 2f8y_A 137 NVDAAVVLLKNGANKDMQN------NREETPLFLAAREGSYETAKVLLDHFA-----NRDITDHM-DRLPRDIAQERMHH 204 (223)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTCCCHHHHHHHHTCHHHHHHHHHTTC-----CTTCCCTT-CCCHHHHHHHTTCH
T ss_pred CHHHHHHHHHcCCCCCCcC------CCCcCHHHHHHHcCCHHHHHHHHHcCC-----CCcccccc-CCCHHHHHHHhcch
Confidence 9999999999999999887 699999999999999999999999995 44555544 54 45556678
Q ss_pred HHHHHHHHcCC
Q 001972 737 KANETAAQIGV 747 (988)
Q Consensus 737 ~~v~~Lle~~a 747 (988)
++++.|++.++
T Consensus 205 ~i~~~L~~~g~ 215 (223)
T 2f8y_A 205 DIVRLLDEYNL 215 (223)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 99999999997
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.79 E-value=1.2e-18 Score=182.66 Aligned_cols=159 Identities=19% Similarity=0.150 Sum_probs=108.5
Q ss_pred hhHHHHHHHHhhhH---HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHh
Q 001972 582 RDKLIQNLLRNRLC---EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 658 (988)
Q Consensus 582 ~~~lL~~al~~~l~---e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~ 658 (988)
..+.|+.|+..+.. +++++.+.+.|.++|..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 88 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 88 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 34567777766543 344444445777888788788888888888888888888888888888888788888888888
Q ss_pred cCCHHHHHHHHHcCC----CCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHh
Q 001972 659 FGREETVIMLVKLGA----APGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA 734 (988)
Q Consensus 659 ~G~~eiV~~LL~~GA----d~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~ 734 (988)
.|+.+++++|++.|+ +++..+ ..|.||||+|+..|+.+++++|++.|++.+..+....... ...|+..+
T Consensus 89 ~~~~~~~~~Ll~~~~~~~~~~~~~~------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~-L~~A~~~~ 161 (241)
T 1k1a_A 89 HRSPTCLRALLDSAAPGTLDLEARN------YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSP-LIHAVENN 161 (241)
T ss_dssp TTCHHHHHHHHHHSCTTSCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCH-HHHHHHTT
T ss_pred cCCHHHHHHHHHcCCCccccccccC------cCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcH-HHHHHHcC
Confidence 888888888887776 444444 5778888888888888888888887744333221111111 23444555
Q ss_pred hHHHHHHHHHcCC
Q 001972 735 AEKANETAAQIGV 747 (988)
Q Consensus 735 ~~~~v~~Lle~~a 747 (988)
..++++.|++.++
T Consensus 162 ~~~~v~~Ll~~g~ 174 (241)
T 1k1a_A 162 SLSMVQLLLQHGA 174 (241)
T ss_dssp CHHHHHHHHHTTC
T ss_pred CHHHHHHHHHcCC
Confidence 6777888887776
No 41
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.79 E-value=2.1e-19 Score=179.88 Aligned_cols=126 Identities=21% Similarity=0.154 Sum_probs=116.4
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 35 ~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 35 RGFTPLIWASAFGEI-ETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN 113 (172)
T ss_dssp TSCCHHHHHHHTTCH-HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 345678888887754 4567888999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCC
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS 713 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~ 713 (988)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++
T Consensus 114 ~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~~~~~~~L~~~~~~ 160 (172)
T 3v30_A 114 HVKCVEALLARGADLTTEA------DSGYTPMDLAVALGYRKVQQVIENHILK 160 (172)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccC------CCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence 9999999999999999887 6999999999999999999999999943
No 42
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.79 E-value=2.1e-19 Score=191.68 Aligned_cols=185 Identities=18% Similarity=0.105 Sum_probs=144.8
Q ss_pred hHHHHHHHHhhhHH---HHHHHHHhCCCCCCccC----CCCCcHHHHHH---HcCChhhhHHHHhCCCC-----------
Q 001972 583 DKLIQNLLRNRLCE---WLVWKIHEGGKGPNVID----DGGQGVVHLAA---ALGYEWAMRPIIATGVS----------- 641 (988)
Q Consensus 583 ~~lL~~al~~~l~e---~Lv~~Lle~Gad~n~~D----~~G~TpLH~AA---~~G~~~iV~~LL~~Gad----------- 641 (988)
.+.|+.|+..+..+ .+++.|++.|++++..+ ..|.||||+|+ ..|+.++|++|++.|++
T Consensus 6 ~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~ 85 (260)
T 3jxi_A 6 RPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSP 85 (260)
T ss_dssp HHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhccc
Confidence 45677777766544 36677778999999776 77999999999 67999999999998744
Q ss_pred CCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCC--------CCCCCCCCCcHHHHHHHcCcHHHHHHHHH---c
Q 001972 642 PNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED--------PTPAFPGGQTAADLASSRGHKGIAGYLAE---A 710 (988)
Q Consensus 642 vn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd--------~~~~d~~G~TPLhlAa~~G~~eiv~~Lle---~ 710 (988)
++..|..|+||||+||..|+.++|++|+++|++++..+. ....+..|.||||+|+..|+.+++++|++ .
T Consensus 86 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 165 (260)
T 3jxi_A 86 FRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK 165 (260)
T ss_dssp BCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 455566899999999999999999999999999998761 11122479999999999999999999999 8
Q ss_pred cCCCCCCCCccccCcchHHHHHHhh-------------HHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhhHH
Q 001972 711 DLSSHLSSLTVNENGMDNVAAALAA-------------EKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAHAA 773 (988)
Q Consensus 711 Ga~~~~~~l~~~d~~~g~taa~~~~-------------~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~AA 773 (988)
| ++++..+.. |.+|+..+. .++++.|++.++ .+............+.++++.|+...
T Consensus 166 g-----a~~~~~d~~-g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g 236 (260)
T 3jxi_A 166 Q-----ADLRRQDSR-GNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTG 236 (260)
T ss_dssp C-----CCTTCCCTT-SCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTT
T ss_pred C-----CCCcccCCC-CCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcC
Confidence 8 667777777 888888877 689999999987 32211122334566677777665443
No 43
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=6.8e-19 Score=191.97 Aligned_cols=154 Identities=16% Similarity=0.074 Sum_probs=131.5
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.|+.|+..+.. .+++.|++.|+++|..|..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|+..
T Consensus 57 ~~g~t~L~~Aa~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~ 135 (285)
T 3d9h_A 57 VSDWSPMHEAAIHGHQ-LSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVS 135 (285)
T ss_dssp CCSCCHHHHHHHTTCH-HHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHH
T ss_pred ccCCCHHHHHHHcCCH-HHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence 3445778888887755 456778889999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHH----HHHHhh
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNV----AAALAA 735 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~t----aa~~~~ 735 (988)
|+.++|++|+++|++++..+ .|.||||+|+..|+.+++++|++.| .+++..+.. |.+ |+..+.
T Consensus 136 ~~~~~v~~Ll~~g~~~~~~~-------~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~d~~-g~t~L~~A~~~~~ 202 (285)
T 3d9h_A 136 GSWDCVNLLLQHGASVQPES-------DLASPIHEAARRGHVECVNSLIAYG-----GNIDHKISH-LGTPLYLACENQQ 202 (285)
T ss_dssp TCHHHHHHHHHTTCCSSCSC-------TTSCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCBTT-TBCHHHHHHHTTC
T ss_pred CHHHHHHHHHHCCCCCCCCC-------CCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCcCCC-CCCHHHHHHHcCc
Confidence 99999999999999987654 6999999999999999999999999 445555554 554 445557
Q ss_pred HHHHHHHHHcCC
Q 001972 736 EKANETAAQIGV 747 (988)
Q Consensus 736 ~~~v~~Lle~~a 747 (988)
.++++.|++.++
T Consensus 203 ~~~v~~Ll~~ga 214 (285)
T 3d9h_A 203 RACVKKLLESGA 214 (285)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
Confidence 899999999987
No 44
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.79 E-value=2.4e-19 Score=177.12 Aligned_cols=124 Identities=24% Similarity=0.303 Sum_probs=111.8
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.++. + ...+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 38 g~t~L~~A~~-~-~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 115 (162)
T 1ihb_A 38 GRTALQVMKL-G-NPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH 115 (162)
T ss_dssp SCCHHHHCCS-S-CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CccHHHHHHc-C-cHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4566777776 4 3456778889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC-CCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCC
Q 001972 662 EETVIMLVKLGAA-PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS 713 (988)
Q Consensus 662 ~eiV~~LL~~GAd-~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~ 713 (988)
.+++++|+++|++ ++..+ ..|.||||+|+..|+.+++++|+++|++
T Consensus 116 ~~~v~~Ll~~g~~~~~~~~------~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 116 LRVVEFLVKHTASNVGHRN------HKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHHHSCCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHHHHHccCCCCCCcC------CCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 9999999999998 47666 6999999999999999999999999953
No 45
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.79 E-value=1.1e-18 Score=187.34 Aligned_cols=168 Identities=15% Similarity=0.051 Sum_probs=141.5
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.|+..+.. .+++.|++.|+++|..|..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..|
T Consensus 35 ~g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~ 112 (261)
T 2xai_A 35 DHVSPLHEACLGGHL-SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRG 112 (261)
T ss_dssp TCCCHHHHHHHHTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcC
Confidence 345788999888754 466888999999999999999999999999999999999999999986 456999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhhH
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAE 736 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~~ 736 (988)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++.+. +.. |. .|+..+..
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~-g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 113 HVECVNSLIAYGGNIDHKI------SHLGTPLYLACENQQRACVKKLLESGADVNQ------GKG-QDSPLHAVARTASE 179 (261)
T ss_dssp CHHHHHHHHHTTCCTTCCB------TTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC------CBT-TBCHHHHHHHHTCH
T ss_pred cHHHHHHHHHcCCCCCcCC------CCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC------CCC-CCChHHHHHHcCCH
Confidence 9999999999999999887 6999999999999999999999999966542 222 44 55566688
Q ss_pred HHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhh
Q 001972 737 KANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSA 770 (988)
Q Consensus 737 ~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~ 770 (988)
++++.|++.++ ++.. ..++.+++..|.
T Consensus 180 ~~v~~Ll~~gad~~~~-------d~~g~tpl~~A~ 207 (261)
T 2xai_A 180 ELACLLMDFGADTQAK-------NAEGKRPVELVP 207 (261)
T ss_dssp HHHHHHHHTTCCTTCC-------CTTSCCGGGGSC
T ss_pred HHHHHHHHcCCCCCCc-------CCCCCChhhhcc
Confidence 99999999998 4333 345566666655
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.79 E-value=7.9e-19 Score=184.09 Aligned_cols=170 Identities=16% Similarity=0.122 Sum_probs=139.1
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCC-CCCCccCCCCCcHhhHHHhcC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG-VSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~G-advn~~D~~G~TpLH~Aa~~G 660 (988)
..+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.| ++++..|..|+||||+|+..|
T Consensus 44 g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~ 122 (237)
T 3b7b_A 44 QRTPLMEAAENNHL-EAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122 (237)
T ss_dssp CCCHHHHHHHTTCH-HHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHhCCH-HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcC
Confidence 34678888887744 4567888999999999999999999999999999999999998 899999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHhhH
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALAAE 736 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~~~ 736 (988)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|+ +++..+.. |.+|. ..+..
T Consensus 123 ~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~~~~Ll~~g~-----~~~~~~~~-g~t~L~~A~~~~~~ 190 (237)
T 3b7b_A 123 HVDLVKLLLSKGSDINIRD------NEENICLHWAAFSGCVDIAEILLAAKC-----DLHAVNIH-GDSPLHIAARENRY 190 (237)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHCCHHHHHHHHTTTC-----CTTCCCTT-CCCHHHHHHHTTCH
T ss_pred CHHHHHHHHHCCCCCCccC------CCCCCHHHHHHHCCCHHHHHHHHHcCC-----CCCCcCCC-CCCHHHHHHHhCCH
Confidence 9999999999999998877 689999999999999999999999994 44555544 55444 45567
Q ss_pred HHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 737 KANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 737 ~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
++++.|++.++ .+.. .+++.++++.|..
T Consensus 191 ~~v~~Ll~~gad~~~~-------d~~g~t~l~~A~~ 219 (237)
T 3b7b_A 191 DCVVLFLSRDSDVTLK-------NKEGETPLQCASL 219 (237)
T ss_dssp HHHHHHHTTTCCTTCC-------CTTSCCHHHHSCT
T ss_pred hHHHHHHHcCCCCCcc-------CCCCCCHHHHHHH
Confidence 89999999987 3322 3455666665543
No 47
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.79 E-value=3.8e-19 Score=160.66 Aligned_cols=92 Identities=34% Similarity=0.458 Sum_probs=87.8
Q ss_pred CCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHH
Q 001972 615 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADL 694 (988)
Q Consensus 615 ~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhl 694 (988)
+|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d------~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD------KNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC------CCCCCHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999887 699999999
Q ss_pred HHHcCcHHHHHHHHHccC
Q 001972 695 ASSRGHKGIAGYLAEADL 712 (988)
Q Consensus 695 Aa~~G~~eiv~~Lle~Ga 712 (988)
|+..|+.+++++|+++|+
T Consensus 75 A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCC
Confidence 999999999999999995
No 48
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.79 E-value=1.1e-18 Score=182.84 Aligned_cols=172 Identities=20% Similarity=0.168 Sum_probs=144.0
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCC----CCCccCCCCCcHhhHH
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGV----SPNFRDARGRTALHWA 656 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Ga----dvn~~D~~G~TpLH~A 656 (988)
...+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|+ +++..|..|+||||+|
T Consensus 45 ~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A 123 (241)
T 1k1a_A 45 LRQTPLHLAVITTLP-SVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA 123 (241)
T ss_dssp TSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHH
T ss_pred cCCCHHHHHHHcCCH-HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHH
Confidence 345678888887744 46688899999999999999999999999999999999999987 8999999999999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHH
Q 001972 657 SYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAA 732 (988)
Q Consensus 657 a~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~ 732 (988)
+..|+.+++++|+++|++++..+. ..|.||||+|+..|+.+++++|++.|+ +++..+.. |. .|+.
T Consensus 124 ~~~~~~~~~~~Ll~~g~~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~-g~t~L~~A~~ 192 (241)
T 1k1a_A 124 VNTECQETVQLLLERGADIDAVDI-----KSGRSPLIHAVENNSLSMVQLLLQHGA-----NVNAQMYS-GSSALHSASG 192 (241)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCT-----TTCCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCBCTT-SCBHHHHHHH
T ss_pred HHcCCHHHHHHHHHcCCCcccccc-----cCCCcHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCC-CCCHHHHHHH
Confidence 999999999999999999988773 589999999999999999999999994 45555544 55 4556
Q ss_pred HhhHHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 733 LAAEKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 733 ~~~~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
.+..++++.|++.++ ++.. ...+.+++..|..
T Consensus 193 ~~~~~~v~~Ll~~ga~~~~~-------~~~g~tpl~~A~~ 225 (241)
T 1k1a_A 193 RGLLPLVRTLVRSGADSSLK-------NCHNDTPLMVARS 225 (241)
T ss_dssp HTCHHHHHHHHHTTCCTTCC-------CTTSCCTTTTCSS
T ss_pred cCCHHHHHHHHhcCCCCCCc-------CCCCCCHHHHHHh
Confidence 667899999999997 4333 2345566665544
No 49
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.79 E-value=1.6e-18 Score=181.66 Aligned_cols=171 Identities=18% Similarity=0.156 Sum_probs=143.6
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.|+..+..+ +++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 10 ~g~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 10 NKRSPLHAAAEAGHVD-ICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp CSCCHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcHH-HHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC
Confidence 3457789999888554 567889999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcC-CCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhh
Q 001972 661 REETVIMLVKLG-AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAA 735 (988)
Q Consensus 661 ~~eiV~~LL~~G-Ad~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~ 735 (988)
+.+++++|++.| ++++..+ ..|.||||+|+..|+.+++++|++.|++ ++..+.. |. .|+..+.
T Consensus 89 ~~~~~~~Ll~~~~~~~~~~~------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~-g~t~L~~A~~~~~ 156 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMDVNCQD------DGGWTPMIWATEYKHVDLVKLLLSKGSD-----INIRDNE-ENICLHWAAFSGC 156 (237)
T ss_dssp CHHHHHHHHTTTCCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTT-SCCHHHHHHHHCC
T ss_pred CHHHHHHHHhCCCCCcccCC------CCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCccCCC-CCCHHHHHHHCCC
Confidence 999999999998 7887776 6999999999999999999999999954 4444444 44 4556667
Q ss_pred HHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 736 EKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 736 ~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
.++++.|++.++ .+.. ...+.++++.|..
T Consensus 157 ~~~~~~Ll~~g~~~~~~-------~~~g~t~L~~A~~ 186 (237)
T 3b7b_A 157 VDIAEILLAAKCDLHAV-------NIHGDSPLHIAAR 186 (237)
T ss_dssp HHHHHHHHTTTCCTTCC-------CTTCCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCc-------CCCCCCHHHHHHH
Confidence 899999999987 3332 2344556665543
No 50
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.78 E-value=1.7e-18 Score=192.14 Aligned_cols=177 Identities=21% Similarity=0.233 Sum_probs=136.6
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCC-CCCcHHHHHHHcCChhhhHHHHhCCCCCC----------------
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDD-GGQGVVHLAAALGYEWAMRPIIATGVSPN---------------- 643 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~-~G~TpLH~AA~~G~~~iV~~LL~~Gadvn---------------- 643 (988)
..+++|+.|++.+..+ +|+.|+++|+++|.+|. .|+||||+||..|+.++|++||++|++++
T Consensus 24 ~~~t~L~~Av~~g~~~-~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 24 EDNHLLIKAVQNEDVD-LVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHTTCHH-HHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCChHHHHHHHcCCHH-HHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 3467899999988654 66888999999998876 49999999999999999999999987654
Q ss_pred -----------------ccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCC----CCCCCCCCCcHHHHHHHcCcHH
Q 001972 644 -----------------FRDARGRTALHWASYFGREETVIMLVKLGAAPGAVED----PTPAFPGGQTAADLASSRGHKG 702 (988)
Q Consensus 644 -----------------~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd----~~~~d~~G~TPLhlAa~~G~~e 702 (988)
..|..|+||||+|+..|+.+++++|+++|++++.... +...+..|.||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 5667789999999999999999999999999887642 1234567999999999999999
Q ss_pred HHHHHHH-ccCCCCCCCCccccCcchHHHHHHh--------hHHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 703 IAGYLAE-ADLSSHLSSLTVNENGMDNVAAALA--------AEKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 703 iv~~Lle-~Ga~~~~~~l~~~d~~~g~taa~~~--------~~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
++++|++ .| ++++..+.. |.++.... ...+++.|++.++ ++.. ...+.++++.|+.
T Consensus 183 ~v~~LL~~~g-----ad~n~~d~~-g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~-------d~~g~t~L~~a~~ 248 (337)
T 4g8k_A 183 VLKILLDEMG-----ADVNACDNM-GRNALIHALLSSDDSDVEAITHLLLDHGADVNVR-------GERGKTPLILAVE 248 (337)
T ss_dssp HHHHHHHHSC-----CCTTCCCTT-SCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCC-------CGGGCCHHHHHHH
T ss_pred HHHHHHhccC-----CCcCccCCC-CCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCc-------CCCCCCHHHHHHH
Confidence 9999996 58 455566555 55444332 2457888999987 4333 2344566665543
No 51
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.78 E-value=2.4e-19 Score=194.66 Aligned_cols=151 Identities=21% Similarity=0.153 Sum_probs=131.1
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCC-------------
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA------------- 647 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~------------- 647 (988)
...+.|+.|+..+.. .+++.|++.|+++|..|..|.||||+|+..|+.++|++|+++|++++..|.
T Consensus 72 ~g~t~L~~A~~~g~~-~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 150 (299)
T 1s70_B 72 DGLTALHQACIDDNV-DMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA 150 (299)
T ss_dssp TCCBHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHH
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcc
Confidence 345789999988754 467889999999999999999999999999999999999999999987664
Q ss_pred -----------------------------------------------CCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCC
Q 001972 648 -----------------------------------------------RGRTALHWASYFGREETVIMLVKLGAAPGAVED 680 (988)
Q Consensus 648 -----------------------------------------------~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd 680 (988)
.|.||||+||..|+.++|++|+++|++++..+
T Consensus 151 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d- 229 (299)
T 1s70_B 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD- 229 (299)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCC-
T ss_pred hHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcC-
Confidence 46788899999999999999999999999887
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhhHHHHHHHHH
Q 001972 681 PTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANETAAQ 744 (988)
Q Consensus 681 ~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~~~~v~~Lle 744 (988)
..|.||||+|+..|+.+++++|+++| ++++..+.. |.+|.+.+....++.|.+
T Consensus 230 -----~~g~tpL~~A~~~~~~~~v~~Ll~~g-----ad~~~~d~~-g~t~l~~A~~~~~~~l~~ 282 (299)
T 1s70_B 230 -----YDGWTPLHAAAHWGKEEACRILVENL-----CDMEAVNKV-GQTAFDVADEDILGYLEE 282 (299)
T ss_dssp -----TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCTTTSCCSGGGHHHHH
T ss_pred -----CCCCcHHHHHHhcCCHHHHHHHHHcC-----CCCCCcCCC-CCCHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999 667777777 888888776555555443
No 52
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.78 E-value=1.7e-19 Score=189.79 Aligned_cols=176 Identities=19% Similarity=0.157 Sum_probs=136.0
Q ss_pred hHHHHHHHHhhhH---HHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 583 DKLIQNLLRNRLC---EWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 583 ~~lL~~al~~~l~---e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
.++||.|+..+.. ++|++.....++++|..|..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|+..
T Consensus 9 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 88 (236)
T 1ikn_D 9 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQ 88 (236)
T ss_dssp CCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHH
T ss_pred CchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 4556777765532 3344444445668999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccC-cchHH----HHHHh
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNEN-GMDNV----AAALA 734 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~-~~g~t----aa~~~ 734 (988)
|+.+++++|++.|++++.....+..+..|.||||+|+..|+.+++++|++.|+ +++..+. . |.+ |+..+
T Consensus 89 ~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~~-g~tpL~~A~~~~ 162 (236)
T 1ikn_D 89 GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA-----DVNAQEPCN-GRTALHLAVDLQ 162 (236)
T ss_dssp TCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC-----CTTCCCTTT-CCCHHHHHHHTT
T ss_pred CCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCCCCCCC-CCCHHHHHHHcC
Confidence 99999999999998865433334455799999999999999999999999994 4454444 3 544 45556
Q ss_pred hHHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 735 AEKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 735 ~~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
..++++.|++.++ ++.. ...+.+++..|..
T Consensus 163 ~~~~v~~Ll~~ga~~~~~-------~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 163 NPDLVSLLLKCGADVNRV-------TYQGYSPYQLTWG 193 (236)
T ss_dssp CHHHHHHHHTTTCCSCCC-------CTTCCCGGGGCTT
T ss_pred CHHHHHHHHHcCCCCCcc-------cCCCCCHHHHHHc
Confidence 7899999999997 4333 2345566665543
No 53
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.78 E-value=5e-19 Score=184.24 Aligned_cols=153 Identities=16% Similarity=0.050 Sum_probs=103.6
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCC--CCCCc-cCCCCCcHHHHHHHcCChhhhHHHHhCC--CCCCccCCCCCcHhhHH
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGG--KGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATG--VSPNFRDARGRTALHWA 656 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~G--ad~n~-~D~~G~TpLH~AA~~G~~~iV~~LL~~G--advn~~D~~G~TpLH~A 656 (988)
..+.|+.++..+.. .+++.|++.| .+++. .|..|.||||+|+..|+.+++++|++.| ++++..|..|+||||+|
T Consensus 36 g~t~L~~A~~~~~~-~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A 114 (228)
T 2dzn_A 36 GRIPLHWSVSFQAH-EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLA 114 (228)
T ss_dssp SCCHHHHHHHTTCH-HHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHH
T ss_pred CCCHHHHHHHcCCH-HHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHH
Confidence 34566777766533 3456667777 44444 6667777777777777777777777777 77777777777777777
Q ss_pred HhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcc-CCCCCCCCccccCcchHHH----H
Q 001972 657 SYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD-LSSHLSSLTVNENGMDNVA----A 731 (988)
Q Consensus 657 a~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~G-a~~~~~~l~~~d~~~g~ta----a 731 (988)
+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.| ++ ++..+.. |.+| +
T Consensus 115 ~~~~~~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-----~~~~d~~-g~t~L~~A~ 182 (228)
T 2dzn_A 115 VGKKWFEVSQFLIENGASVRIKD------KFNQIPLHRAASVGSLKLIELLCGLGKSA-----VNWQDKQ-GWTPLFHAL 182 (228)
T ss_dssp HHTTCHHHHHHHHHTTCCSCCCC------TTSCCHHHHHHHTTCHHHHHHHHTTTCCC-----SCCCCTT-SCCHHHHHH
T ss_pred HHcCCHhHHHHHHHcCCCccccC------CCCCCHHHHHHHcCCHHHHHHHHhcCccc-----ccCcCCC-CCCHHHHHH
Confidence 77777777777777777777666 57777777777777777777777776 33 3333333 4433 3
Q ss_pred HHhhHHHHHHHH-HcCC
Q 001972 732 ALAAEKANETAA-QIGV 747 (988)
Q Consensus 732 ~~~~~~~v~~Ll-e~~a 747 (988)
..+..++++.|+ +.++
T Consensus 183 ~~~~~~~v~~Ll~~~ga 199 (228)
T 2dzn_A 183 AEGHGDAAVLLVEKYGA 199 (228)
T ss_dssp HTTCHHHHHHHHHHHCC
T ss_pred HcCCHHHHHHHHHhcCC
Confidence 444567777777 6665
No 54
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.78 E-value=1.7e-18 Score=180.22 Aligned_cols=143 Identities=21% Similarity=0.159 Sum_probs=124.1
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCC--CCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHh
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGG--KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 658 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~G--ad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~ 658 (988)
...+.|+.++..+.. .+++.|++.| ++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.
T Consensus 71 ~g~t~L~~A~~~~~~-~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 149 (228)
T 2dzn_A 71 SGWTPFHIACSVGNL-EVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAAS 149 (228)
T ss_dssp TSCCHHHHHHHHCCH-HHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence 445788888887744 4667788888 8888899999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcC-CCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH-HccCCCCCCCCccccCcchHHHHHHhhH
Q 001972 659 FGREETVIMLVKLG-AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLA-EADLSSHLSSLTVNENGMDNVAAALAAE 736 (988)
Q Consensus 659 ~G~~eiV~~LL~~G-Ad~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Ll-e~Ga~~~~~~l~~~d~~~g~taa~~~~~ 736 (988)
.|+.+++++|+++| ++++..+ ..|.||||+|+..|+.+++++|+ +.| ++++..+.. |.+|.+.+..
T Consensus 150 ~~~~~~v~~Ll~~g~~~~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~~g-----a~~~~~~~~-g~t~l~~A~~ 217 (228)
T 2dzn_A 150 VGSLKLIELLCGLGKSAVNWQD------KQGWTPLFHALAEGHGDAAVLLVEKYG-----AEYDLVDNK-GAKAEDVALN 217 (228)
T ss_dssp TTCHHHHHHHHTTTCCCSCCCC------TTSCCHHHHHHHTTCHHHHHHHHHHHC-----CCSCCBCTT-SCBGGGGCSS
T ss_pred cCCHHHHHHHHhcCcccccCcC------CCCCCHHHHHHHcCCHHHHHHHHHhcC-----CCCCccCCC-CCcHHHHHHH
Confidence 99999999999999 8888877 68999999999999999999999 889 666777776 7788777643
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.78 E-value=2e-19 Score=191.71 Aligned_cols=159 Identities=11% Similarity=0.046 Sum_probs=129.5
Q ss_pred hhhHHHHHHHHh---hhHHHHHHHHHhCCCCCCc-----------cCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccC
Q 001972 581 SRDKLIQNLLRN---RLCEWLVWKIHEGGKGPNV-----------IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD 646 (988)
Q Consensus 581 ~~~~lL~~al~~---~l~e~Lv~~Lle~Gad~n~-----------~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D 646 (988)
...+.|+.|+.. +.. .+++.|++.|++++. .|..|.||||+||..|+.++|++|+++|++++.+|
T Consensus 42 ~g~t~L~~A~~~~~~g~~-~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 120 (256)
T 2etb_A 42 TGKTCLMKAVLNLQDGVN-ACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRA 120 (256)
T ss_dssp TTBCHHHHHHHTCBTTBC-TTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCHHHHHHHccccchH-HHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence 445778888876 432 345666677777663 34789999999999999999999999999999999
Q ss_pred CC-------------CCcHhhHHHhcCCHHHHHHHHH---cCCCCCccCCCCCCCCCCCcHHHHHHH--cCcHH------
Q 001972 647 AR-------------GRTALHWASYFGREETVIMLVK---LGAAPGAVEDPTPAFPGGQTAADLASS--RGHKG------ 702 (988)
Q Consensus 647 ~~-------------G~TpLH~Aa~~G~~eiV~~LL~---~GAd~n~~dd~~~~d~~G~TPLhlAa~--~G~~e------ 702 (988)
.. |+||||+|+..|+.++|++|++ +|++++.++ ..|+||||+|+. .++.+
T Consensus 121 ~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d------~~g~TpLh~A~~~~~~~~~~~~~~~ 194 (256)
T 2etb_A 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATD------SLGNTVLHALVMIADNSPENSALVI 194 (256)
T ss_dssp CSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC------TTSCCHHHHHHHHCCSCHHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccC------CCCCCHHHHHHHcccCCchhhHHHH
Confidence 87 9999999999999999999999 999999988 699999999999 88888
Q ss_pred -HHHHHHHccCCCCCCC--CccccCcchHHHHH----HhhHHHHHHHHHcCC
Q 001972 703 -IAGYLAEADLSSHLSS--LTVNENGMDNVAAA----LAAEKANETAAQIGV 747 (988)
Q Consensus 703 -iv~~Lle~Ga~~~~~~--l~~~d~~~g~taa~----~~~~~~v~~Lle~~a 747 (988)
++++|+++|++..... .+..+.. |.+|+. .++.++++.|+++++
T Consensus 195 ~iv~~Ll~~ga~~~~~~~~~~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~g~ 245 (256)
T 2etb_A 195 HMYDGLLQMGARLCPTVQLEEISNHQ-GLTPLKLAAKEGKIEIFRHILQREF 245 (256)
T ss_dssp HHHHHHHHHHHHHSTTCCGGGCCCTT-SCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcccccccccccCCC-CCCHHHHHHHhCCHHHHHHHHhCCC
Confidence 9999999995431100 0556665 665554 457799999998874
No 56
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.78 E-value=1.1e-18 Score=174.72 Aligned_cols=124 Identities=28% Similarity=0.325 Sum_probs=114.5
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 46 ~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 124 (169)
T 2y1l_E 46 SGWTPLHLAAFNGHL-EIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFG 124 (169)
T ss_dssp TSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 345678888888754 4667889999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcc
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 711 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~G 711 (988)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|
T Consensus 125 ~~~~v~~Ll~~g~~~~~~~------~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 125 HLEIVEVLLKNGADVNAQD------KFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 9999999999999998887 69999999999999999999999876
No 57
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.78 E-value=4.6e-19 Score=190.90 Aligned_cols=186 Identities=18% Similarity=0.159 Sum_probs=143.4
Q ss_pred hhhHHHHHHHHhhh---HHHHHHHHHhCCCCCC----ccCCCCCcHHHHHHHc---CChhhhHHHHhCCCCC-------C
Q 001972 581 SRDKLIQNLLRNRL---CEWLVWKIHEGGKGPN----VIDDGGQGVVHLAAAL---GYEWAMRPIIATGVSP-------N 643 (988)
Q Consensus 581 ~~~~lL~~al~~~l---~e~Lv~~Lle~Gad~n----~~D~~G~TpLH~AA~~---G~~~iV~~LL~~Gadv-------n 643 (988)
...+.|+.|+..+. .+.|++.+.+.+++++ ..|..|+||||+||.. |+.++|++|++.|+++ |
T Consensus 12 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~ 91 (273)
T 2pnn_A 12 YDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVN 91 (273)
T ss_dssp CCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhh
Confidence 44577888887664 3456666677888887 4588999999999987 9999999999998753 3
Q ss_pred c----cCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCC--------CCCCCCCCCcHHHHHHHcCcHHHHHHHHH--
Q 001972 644 F----RDARGRTALHWASYFGREETVIMLVKLGAAPGAVED--------PTPAFPGGQTAADLASSRGHKGIAGYLAE-- 709 (988)
Q Consensus 644 ~----~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd--------~~~~d~~G~TPLhlAa~~G~~eiv~~Lle-- 709 (988)
. .|..|+||||+|+..|+.++|++|+++|++++..+. ....+..|.||||+|+..|+.+++++|++
T Consensus 92 ~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 92 ASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2 567899999999999999999999999999998872 11222379999999999999999999999
Q ss_pred -ccCCCCCCCCccccCcchHHHHHHhh-------------HHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhhH
Q 001972 710 -ADLSSHLSSLTVNENGMDNVAAALAA-------------EKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAHA 772 (988)
Q Consensus 710 -~Ga~~~~~~l~~~d~~~g~taa~~~~-------------~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~A 772 (988)
.| .+++..+.. |.+|+..+. .++++.|++.++ .+............+.++++.|+..
T Consensus 172 ~~g-----ad~~~~d~~-g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 172 WQP-----ADISARDSV-GNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp SCC-----CCTTCCCTT-SCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred cCC-----CCceeeCCC-CCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 88 666677776 777777765 588999999987 3321111122345666777766543
No 58
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=1.9e-19 Score=191.12 Aligned_cols=151 Identities=19% Similarity=0.127 Sum_probs=105.5
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCH
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE 662 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~ 662 (988)
.+.|+.++..+.. ..++.|+++|++++. +..|.||||+||..|+.++|++|++.|+++|.+|..|+||||+||..|+.
T Consensus 6 ~t~L~~a~~~~~~-~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~ 83 (239)
T 1ycs_B 6 QVSLPPGKRTNLR-KTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHT 83 (239)
T ss_dssp ---------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCH
T ss_pred cccCchhhhhhhH-HHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 4567777776543 355778889999985 47889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH-HHHHHh------h
Q 001972 663 ETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN-VAAALA------A 735 (988)
Q Consensus 663 eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~-taa~~~------~ 735 (988)
++|++|+++|++++.++ ..|.||||+|+..|+.+++++|+++| ++++..+.. |. +|+..+ +
T Consensus 84 ~~v~~Ll~~ga~~~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-~~~t~l~~a~~~~~g~ 151 (239)
T 1ycs_B 84 EIVKFLVQFGVNVNAAD------SDGWTPLHCAASCNNVQVCKFLVESG-----AAVFAMTYS-DMQTAADKCEEMEEGY 151 (239)
T ss_dssp HHHHHHHHHTCCTTCCC------TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCSS-SCCCHHHHCCSSSTTC
T ss_pred HHHHHHHHcCCCCCccC------CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCcceecCC-CCcchHHHHHHhhhcc
Confidence 99999999999998887 68999999999999999999999999 555555554 44 666654 4
Q ss_pred HHHHHHHHHcCC
Q 001972 736 EKANETAAQIGV 747 (988)
Q Consensus 736 ~~~v~~Lle~~a 747 (988)
.++++.|++.++
T Consensus 152 ~~~~~~Ll~~~a 163 (239)
T 1ycs_B 152 TQCSQFLYGVQE 163 (239)
T ss_dssp CCHHHHHHHHHH
T ss_pred HHHHHHHHHhhh
Confidence 678889988876
No 59
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=7.3e-18 Score=180.05 Aligned_cols=159 Identities=21% Similarity=0.240 Sum_probs=115.0
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCcc-CCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVI-DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~-D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
..++|+.++..+..+ +++.|++.|++++.. +..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 5 g~~~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVD-LVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAG 83 (285)
T ss_dssp HHHHHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred cchHHHHHHHcCCHH-HHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 356677777776554 456677788888776 667888888888888888888888888888888888888888888888
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccc-----cCc---chHHHHH
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVN-----ENG---MDNVAAA 732 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~-----d~~---~g~taa~ 732 (988)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++......... +.. +...|+.
T Consensus 84 ~~~~v~~Ll~~g~~~~~~~------~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 84 SVKLLKLFLSKGADVNECD------FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp CHHHHHHHHHTTCCTTCBC------TTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccC------cccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHH
Confidence 8888888888888877766 5788888888888888888888888855443321100 111 1235556
Q ss_pred HhhHHHHHHHHHc-CC
Q 001972 733 LAAEKANETAAQI-GV 747 (988)
Q Consensus 733 ~~~~~~v~~Lle~-~a 747 (988)
.+..++++.|++. ++
T Consensus 158 ~~~~~~v~~Ll~~~~~ 173 (285)
T 1wdy_A 158 KGHVEVLKILLDEMGA 173 (285)
T ss_dssp HTCHHHHHHHHHTSCC
T ss_pred cCCHHHHHHHHHhcCC
Confidence 6677788888876 54
No 60
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=3.8e-18 Score=182.26 Aligned_cols=176 Identities=19% Similarity=0.144 Sum_probs=143.9
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.|+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 39 g~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 117 (285)
T 1wdy_A 39 GWTPLHNAVQMSRE-DIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGK 117 (285)
T ss_dssp CCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTC
T ss_pred CCcHHHHHHHcCCH-HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCC
Confidence 35678999988754 46678899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCC----CCCCCCCcHHHHHHHcCcHHHHHHHHHc-cCCCCCCCCccccCcchHHHHHHh--
Q 001972 662 EETVIMLVKLGAAPGAVEDPT----PAFPGGQTAADLASSRGHKGIAGYLAEA-DLSSHLSSLTVNENGMDNVAAALA-- 734 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~----~~d~~G~TPLhlAa~~G~~eiv~~Lle~-Ga~~~~~~l~~~d~~~g~taa~~~-- 734 (988)
.+++++|+++|++++..+... ..+..|.||||+|+..|+.+++++|++. | .+++..+.. |.+|...+
T Consensus 118 ~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-----~~~~~~~~~-g~t~l~~a~~ 191 (285)
T 1wdy_A 118 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMG-----ADVNACDNM-GRNALIHALL 191 (285)
T ss_dssp HHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSC-----CCTTCCCTT-SCCHHHHHHH
T ss_pred HHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcC-----CCCCccCCC-CCCHHHHHHH
Confidence 999999999999998873100 0136899999999999999999999997 8 455555555 66665554
Q ss_pred --h----HHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 735 --A----EKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 735 --~----~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
. .++++.|++.++ .+.. ...+.++++.|..
T Consensus 192 ~~~~~~~~~i~~~Ll~~g~~~~~~-------~~~g~t~L~~A~~ 228 (285)
T 1wdy_A 192 SSDDSDVEAITHLLLDHGADVNVR-------GERGKTPLILAVE 228 (285)
T ss_dssp CSCTTTHHHHHHHHHHTTCCSSCC-------CTTSCCHHHHHHH
T ss_pred ccccchHHHHHHHHHHcCCCCCCc-------CCCCCcHHHHHHH
Confidence 3 789999999997 3332 2344566665543
No 61
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.77 E-value=1.7e-18 Score=170.38 Aligned_cols=120 Identities=22% Similarity=0.236 Sum_probs=111.5
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 33 ~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 111 (153)
T 1awc_B 33 LGTSPLHLAAQYGHF-STTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN 111 (153)
T ss_dssp TCCCHHHHHHHHTCH-HHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 345778988887744 4667889999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHH
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYL 707 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~L 707 (988)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|
T Consensus 112 ~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 112 HQEVVELLIKYGADVHTQS------KFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHHHcCCCccccC------CCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999887 6999999999999999999987
No 62
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.77 E-value=3.1e-18 Score=186.74 Aligned_cols=167 Identities=14% Similarity=0.040 Sum_probs=140.8
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.|+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++..+ .|+||||+|+..|+
T Consensus 92 g~t~L~~A~~~g~~-~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~ 169 (285)
T 3d9h_A 92 HVSPLHEACLGGHL-SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGH 169 (285)
T ss_dssp CCCHHHHHHHTTCH-HHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTC
T ss_pred CCCHHHHHHHCCcH-HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCC
Confidence 45778999888754 46688899999999999999999999999999999999999999998654 59999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhhHH
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEK 737 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~~~ 737 (988)
.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++.+ . +.. |. .|+..+..+
T Consensus 170 ~~~v~~Ll~~g~~~~~~d------~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-----~-~~~-g~t~L~~A~~~~~~~ 236 (285)
T 3d9h_A 170 VECVNSLIAYGGNIDHKI------SHLGTPLYLACENQQRACVKKLLESGADVN-----Q-GKG-QDSPLHAVVRTASEE 236 (285)
T ss_dssp HHHHHHHHHTTCCTTCCB------TTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-----C-CBT-TBCHHHHHHHTTCHH
T ss_pred HHHHHHHHHCCCCCCCcC------CCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-----C-CCC-CCCHHHHHHHcCCHH
Confidence 999999999999999887 699999999999999999999999996554 2 232 44 455556789
Q ss_pred HHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhh
Q 001972 738 ANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSA 770 (988)
Q Consensus 738 ~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~ 770 (988)
+++.|++.++ .+.. ..++.+++..|.
T Consensus 237 ~v~~Ll~~gad~~~~-------d~~g~t~l~~A~ 263 (285)
T 3d9h_A 237 LACLLMDFGADTQAK-------NAEGKRPVELVP 263 (285)
T ss_dssp HHHHHHHTTCCTTCC-------CTTSCCGGGGSC
T ss_pred HHHHHHHCCCCCCCc-------CCCCCCHHHHhc
Confidence 9999999997 4333 345566666665
No 63
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.77 E-value=8e-19 Score=166.46 Aligned_cols=117 Identities=21% Similarity=0.130 Sum_probs=73.6
Q ss_pred CCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHH
Q 001972 613 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAA 692 (988)
Q Consensus 613 D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPL 692 (988)
+..|.||||+|+..|+.++++.|++.|++++.+|..|+||||+||..|+.+++++|+++|++++..+ ..|.|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d------~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD------KHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCC------TTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC------CCCCCHH
Confidence 3455666666666666666666666666666666666666666666666666666666666666655 4666666
Q ss_pred HHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhhHHHHHH
Q 001972 693 DLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKANET 741 (988)
Q Consensus 693 hlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~~~~v~~ 741 (988)
|+|+..|+.+++++|+++| .+++.++.. |.+|...+....+..
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKG-----ADKTVKGPD-GLTAFEATDNQAIKA 120 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHCCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-----CCCCCcCCC-CCCHHHHhCCHHHHH
Confidence 6666666666666666666 444555555 666666654443333
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.77 E-value=6.7e-19 Score=174.95 Aligned_cols=123 Identities=23% Similarity=0.233 Sum_probs=112.8
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 42 g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 120 (165)
T 3twr_A 42 QSTPLHFAAGYNRV-SVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK 120 (165)
T ss_dssp CCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcChH-HHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 34788999888754 46688899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccC
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADL 712 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga 712 (988)
.+++++|+++|++++.++ ..|.||||+|+. |+.+++++|++.|+
T Consensus 121 ~~~v~~Ll~~ga~~~~~~------~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 121 YEICKLLLQHGADPTKKN------RDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHHHHHTTCCTTCCC------TTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred HHHHHHHHHcCCCCcccC------CCCCChhHhHhc-CChHHHHHHhhccc
Confidence 999999999999999887 699999999877 99999999999883
No 65
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.77 E-value=8.3e-19 Score=177.12 Aligned_cols=129 Identities=19% Similarity=0.186 Sum_probs=118.8
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|
T Consensus 38 ~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 116 (179)
T 3f6q_A 38 HGFSPLHWACREGRS-AVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG 116 (179)
T ss_dssp TSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCcH-HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 345678988887754 4668899999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCC
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHL 716 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~ 716 (988)
+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|++.|++.+.
T Consensus 117 ~~~~v~~Ll~~ga~~~~~~------~~g~tpl~~A~~~~~~~~~~~L~~~g~~~~~ 166 (179)
T 3f6q_A 117 QDQVAEDLVANGALVSICN------KYGEMPVDKAKAPLRELLRERAEKMGQNLNR 166 (179)
T ss_dssp CHHHHHHHHHTTCCSSBCC------TTSCCGGGGSCHHHHHHHHHHHHHTTCCCSC
T ss_pred CHHHHHHHHHCCCCcchhc------cCCCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 9999999999999999987 6999999999999999999999999965543
No 66
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=3.1e-18 Score=196.77 Aligned_cols=155 Identities=21% Similarity=0.200 Sum_probs=106.4
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.|+..+..+ +++.|++.|+++|..|..|.||||+||..|+.++|++|++.|+++|.+|..|+||||+||..|
T Consensus 13 ~g~t~L~~Aa~~g~~~-~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 13 SGLTPLHVASFMGHLP-IVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIG 91 (437)
T ss_dssp --CCHHHHHHHHTCHH-HHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHT
T ss_pred CCCCHHHHHHHCCCHH-HHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCC
Confidence 3445677777766443 456677777777777777777777777777777777777777777777777777777777777
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCc---chHHHHHHhhHH
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG---MDNVAAALAAEK 737 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~---~g~taa~~~~~~ 737 (988)
+.++|++|+++|++++..+ ..|.||||+|+..|+.+++++|++.|++. +..+.. +...|+..+..+
T Consensus 92 ~~~~v~~Ll~~ga~~~~~~------~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-----~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLAT------TAGHTPLHIAAREGHVETVLALLEKEASQ-----ACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCC------TTCCCHHHHHHHHTCHHHHHHHHHTTCCS-----CCCCTTSCCHHHHHHHTTCHH
T ss_pred CHHHHHHHHhCCCCCCCCC------CCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----cCCCCCCCCHHHHHHHcCCHH
Confidence 7777777777777777666 47777777777777777777777777332 222222 122444555667
Q ss_pred HHHHHHHcCC
Q 001972 738 ANETAAQIGV 747 (988)
Q Consensus 738 ~v~~Lle~~a 747 (988)
+++.|++.++
T Consensus 161 ~v~~Ll~~g~ 170 (437)
T 1n11_A 161 VAELLLERDA 170 (437)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhCCC
Confidence 7777777765
No 67
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.77 E-value=5.7e-19 Score=192.79 Aligned_cols=152 Identities=17% Similarity=0.067 Sum_probs=122.8
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.|+.|+..+..+ +++.|++.|+++|..| |.||||+||..|+.++|++|+++|++++.+|..|+||||+|+..
T Consensus 29 ~~g~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~ 105 (285)
T 3kea_A 29 VHGHSASYYAIADNNVR-LVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDS 105 (285)
T ss_dssp TTSCCHHHHHHHTTCHH-HHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHH-HHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHc
Confidence 34456788888877544 5677888899888774 89999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCC-CcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHH----h
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGG-QTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----A 734 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G-~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~----~ 734 (988)
|+.++|++|+++|++++..+ ..| .||||+|+..|+.+++++|++.|++. .-. .. |.+|+.. +
T Consensus 106 g~~~~v~~Ll~~ga~~~~~~------~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~-----~~~-~~-g~t~L~~A~~~g 172 (285)
T 3kea_A 106 GNMQTVKLFVKKNWRLMFYG------KTGWKTSFYHAVMLNDVSIVSYFLSEIPST-----FDL-AI-LLSCIHITIKNG 172 (285)
T ss_dssp TCHHHHHHHHHHCGGGGGCS------SSGGGSHHHHHHHTTCHHHHHHHHTTSCTT-----CCC-ST-HHHHHHHHHHTT
T ss_pred CCHHHHHHHHhcCCCCCccC------CCCCCCHHHHHHHcCCHHHHHHHHhCCCcc-----ccc-cC-CccHHHHHHHcC
Confidence 99999999999999988877 577 79999999999999999999988433 111 13 6655544 4
Q ss_pred hHHHHHHHHHcCC
Q 001972 735 AEKANETAAQIGV 747 (988)
Q Consensus 735 ~~~~v~~Lle~~a 747 (988)
..++++.|++.++
T Consensus 173 ~~~~v~~Ll~~ga 185 (285)
T 3kea_A 173 HVDMMILLLDYMT 185 (285)
T ss_dssp CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCC
Confidence 6788999998887
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.77 E-value=5.3e-19 Score=187.45 Aligned_cols=127 Identities=24% Similarity=0.209 Sum_probs=115.4
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...++|+.++..+..+ +++.|++.|+++|..|..|+||||+||..|+.++|++|++.|+++|.+|..|+||||+||..|
T Consensus 20 ~~~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g 98 (229)
T 2vge_A 20 NPLVLLLDAALTGELE-VVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCN 98 (229)
T ss_dssp CHHHHHHHHHHHTCHH-HHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhHHHHHHHHcCCHH-HHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 4457888898887554 557788899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHH--HHcCcHHHHHHHHHccCC
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA--SSRGHKGIAGYLAEADLS 713 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA--a~~G~~eiv~~Lle~Ga~ 713 (988)
+.++|++|+++|++++..++ ..|.||||+| +..|+.+++++|++.|++
T Consensus 99 ~~~~v~~Ll~~ga~~~~~~~-----~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~ 148 (229)
T 2vge_A 99 DTVICMALVQHGAAIFATTL-----SDGATAFEKCDPYREGYADCATYLADVEQS 148 (229)
T ss_dssp CHHHHHHHHTTTCCTTCCCS-----STTCCTGGGCCTTSTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCcccccC-----CCCCCHHHHHHHHhcChHHHHHHHHHcCCC
Confidence 99999999999999998863 5899999999 999999999999999944
No 69
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.76 E-value=4.5e-19 Score=182.46 Aligned_cols=125 Identities=10% Similarity=-0.019 Sum_probs=110.0
Q ss_pred hhhHHHHHHHHhhhHH---HHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC------hhhhHHHHhCCCCCCccCCCCC-
Q 001972 581 SRDKLIQNLLRNRLCE---WLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY------EWAMRPIIATGVSPNFRDARGR- 650 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e---~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~------~~iV~~LL~~Gadvn~~D~~G~- 650 (988)
...++||.++..+..+ .+++.|+++|+++|.+|..|+||||+|+..|+ .++|++|+++|+++|.+|..|+
T Consensus 37 ~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~t 116 (186)
T 3t8k_A 37 LKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKI 116 (186)
T ss_dssp HTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTB
T ss_pred CCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCc
Confidence 3467888888766432 47788899999999999999999999999997 4679999999999999999999
Q ss_pred cHhhHHHhcC-----CHHHHHHHHH-cCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcc
Q 001972 651 TALHWASYFG-----REETVIMLVK-LGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 711 (988)
Q Consensus 651 TpLH~Aa~~G-----~~eiV~~LL~-~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~G 711 (988)
||||+|+..| +.+++++|++ +|++++.+| ..|.||||+|+..|+.+++++|.+..
T Consensus 117 tpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d------~~G~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD------KWGLTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC------TTSCCHHHHHHTTTCHHHHHHHHHHH
T ss_pred hHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC------CCCCCHHHHHHHcCCHHHHHHHHHHH
Confidence 9999999954 4569999999 999999988 69999999999999999999999876
No 70
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.76 E-value=6.6e-19 Score=196.23 Aligned_cols=169 Identities=13% Similarity=0.078 Sum_probs=133.6
Q ss_pred HHHHHhhhHHHHHHHHHhCCCCCCc-cCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC---H
Q 001972 587 QNLLRNRLCEWLVWKIHEGGKGPNV-IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR---E 662 (988)
Q Consensus 587 ~~al~~~l~e~Lv~~Lle~Gad~n~-~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~---~ 662 (988)
+.++.. ....+++.|++.|+++|. .|..|+||||+||..|+.++|++||++|+++|.+|..|+||||+|+..|+ .
T Consensus 102 ~~a~~~-~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 102 HVSFDS-LLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp --CHHH-HHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred HHHHHh-hHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccH
Confidence 434443 345677888999999999 89999999999999999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHcC-CCCCccCCCCCCCCCCCcHHHHHHH----cCcHHHHHHHHHcc--------------------CCCCCC
Q 001972 663 ETVIMLVKLG-AAPGAVEDPTPAFPGGQTAADLASS----RGHKGIAGYLAEAD--------------------LSSHLS 717 (988)
Q Consensus 663 eiV~~LL~~G-Ad~n~~dd~~~~d~~G~TPLhlAa~----~G~~eiv~~Lle~G--------------------a~~~~~ 717 (988)
+++..|++.+ ++++..+ ..|+||||+|+. .|+.+++++|++.+ ++.+..
T Consensus 181 ~~~~~ll~~~~~~~~~~d------~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 254 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILED------SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDK 254 (327)
T ss_dssp TCHHHHHHHHGGGGGEEC------TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------
T ss_pred HHHHHHHHhhhccccCCC------CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccc
Confidence 8888888887 6788777 699999999999 89999999999874 222211
Q ss_pred --------------------CCccccCcchHHHH----HHhhHHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhh
Q 001972 718 --------------------SLTVNENGMDNVAA----ALAAEKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSA 770 (988)
Q Consensus 718 --------------------~l~~~d~~~g~taa----~~~~~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~ 770 (988)
+++..+.. |.||+ ..++.++|+.|++.++ ++.. ...+.++++.|+
T Consensus 255 ~~~g~t~L~~a~~~~~Ll~~~~n~~d~~-G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~-------d~~G~TpL~~A~ 324 (327)
T 1sw6_A 255 NGERKDSILENLDLKWIIANMLNAQDSN-GDTCLNIAARLGNISIVDALLDYGADPFIA-------NKSGLRPVDFGA 324 (327)
T ss_dssp -----CHHHHHCSHHHHHHHTTTCCCTT-SCCHHHHHHHHCCHHHHHHHHHTTCCTTCC-------CTTSCCGGGGTC
T ss_pred cccCCChhHHHHHHHHHHHhCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCccc-------CCCCCCHHHHHH
Confidence 36666666 66555 4456889999999997 4333 345556666554
No 71
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.76 E-value=2.9e-18 Score=174.90 Aligned_cols=127 Identities=20% Similarity=0.194 Sum_probs=114.4
Q ss_pred CCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCC
Q 001972 609 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGG 688 (988)
Q Consensus 609 ~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G 688 (988)
+|.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~------~~g 101 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKD------FSG 101 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC------TTS
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCC------CCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999998887 699
Q ss_pred CcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhhHHHHHHHHHcCC
Q 001972 689 QTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEKANETAAQIGV 747 (988)
Q Consensus 689 ~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~~~~v~~Lle~~a 747 (988)
.||||+|+..|+.+++++|++.|+ +++..+.. |. .|+..+..++++.|++.++
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga 158 (192)
T 2rfm_A 102 KTPLMWSIIFGYSEMSYFLLEHGA-----NVNDRNLE-GETPLIVASKYGRSEIVKKLLELGA 158 (192)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC-----CSSCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCC-----CCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 999999999999999999999994 44555544 55 4555667899999999987
No 72
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.76 E-value=4.5e-19 Score=189.09 Aligned_cols=158 Identities=10% Similarity=-0.006 Sum_probs=125.0
Q ss_pred hhHHHHHHH---HhhhHHHHHHHHHhCC-----------CCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccC-
Q 001972 582 RDKLIQNLL---RNRLCEWLVWKIHEGG-----------KGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD- 646 (988)
Q Consensus 582 ~~~lL~~al---~~~l~e~Lv~~Lle~G-----------ad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D- 646 (988)
..+.||.|+ ..+ ...+++.|++.| .+++..|..|+||||+||..|+.++|++|+++|++++.+|
T Consensus 46 g~t~L~~A~~~~~~g-~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 124 (260)
T 3jxi_A 46 GKTCLPKALLNLSAG-RNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQAR 124 (260)
T ss_dssp CCCHHHHHHTSCBTT-BCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCE
T ss_pred CCcHHHHHHHHhhcC-CHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccc
Confidence 446677666 222 222344455544 3345566689999999999999999999999999999999
Q ss_pred -------------CCCCcHhhHHHhcCCHHHHHHHHH---cCCCCCccCCCCCCCCCCCcHHHHHHHcCc---------H
Q 001972 647 -------------ARGRTALHWASYFGREETVIMLVK---LGAAPGAVEDPTPAFPGGQTAADLASSRGH---------K 701 (988)
Q Consensus 647 -------------~~G~TpLH~Aa~~G~~eiV~~LL~---~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~---------~ 701 (988)
..|+||||+|+..|+.++|++|++ +|++++.++ ..|+||||+|+..|+ .
T Consensus 125 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d------~~g~TpLh~A~~~~~~~~~~~~~~~ 198 (260)
T 3jxi_A 125 GRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQD------SRGNTVLHALVAIADNTRENTKFVT 198 (260)
T ss_dssp ECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC------TTSCCHHHHHHHHCCSSHHHHHHHH
T ss_pred ccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccC------CCCCcHHHHHHHhccCchhHHHHHH
Confidence 689999999999999999999999 999999887 699999999998887 7
Q ss_pred HHHHHHHHccCCCCC--CCCccccCcchHHHH----HHhhHHHHHHHHHcCC
Q 001972 702 GIAGYLAEADLSSHL--SSLTVNENGMDNVAA----ALAAEKANETAAQIGV 747 (988)
Q Consensus 702 eiv~~Lle~Ga~~~~--~~l~~~d~~~g~taa----~~~~~~~v~~Lle~~a 747 (988)
+++++|+++|++.+. ...+..+.. |.+|+ ..++.++++.|+++++
T Consensus 199 ~~v~~Ll~~ga~~~~~~~~~~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~g~ 249 (260)
T 3jxi_A 199 KMYDLLLIKCAKLFPDTNLEALLNND-GLSPLMMAAKTGKIGIFQHIIRREI 249 (260)
T ss_dssp HHHHHHHHHHHHHCTTCCGGGCCCTT-SCCHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccccccchhhcccCC-CCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 999999999955421 111455555 66554 5557899999999986
No 73
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=3.4e-18 Score=196.46 Aligned_cols=169 Identities=15% Similarity=0.136 Sum_probs=139.8
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.++..+.. .+++.|++.|+++|..|..|.||||+|+..|+.++|++|++.|++++..|..|+||||+|+..|+
T Consensus 212 g~t~L~~A~~~~~~-~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~ 290 (437)
T 1n11_A 212 GYTPLHIAAKQNQV-EVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH 290 (437)
T ss_dssp CCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCCHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 34678888877754 45677889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHH----HHHhhHH
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEK 737 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta----a~~~~~~ 737 (988)
.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++| ++++.++.. |.+| +..++.+
T Consensus 291 ~~~~~~Ll~~g~~~~~~~------~~g~t~L~~A~~~g~~~~v~~Ll~~g-----ad~n~~~~~-g~t~L~~A~~~g~~~ 358 (437)
T 1n11_A 291 VPVADVLIKHGVMVDATT------RMGYTPLHVASHYGNIKLVKFLLQHQ-----ADVNAKTKL-GYSPLHQAAQQGHTD 358 (437)
T ss_dssp HHHHHHHHHHTCCTTCCC------SSCCCHHHHHHHSSCSHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHH
T ss_pred HHHHHHHHhCCccCCCCC------CCCCCHHHHHHHcCcHHHHHHHHhcC-----CCCCCCCCC-CCCHHHHHHHCChHH
Confidence 999999999999998877 68999999999999999999999999 455555555 5544 4555789
Q ss_pred HHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhh
Q 001972 738 ANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSA 770 (988)
Q Consensus 738 ~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~ 770 (988)
+|+.|++.++ ++.. ..++.+++..|.
T Consensus 359 iv~~Ll~~ga~~~~~-------~~~g~t~l~~A~ 385 (437)
T 1n11_A 359 IVTLLLKNGASPNEV-------SSDGTTPLAIAK 385 (437)
T ss_dssp HHHHHHHTTCCSCCC-------CSSSCCHHHHHH
T ss_pred HHHHHHHCcCCCCCC-------CCCCCCHHHHHH
Confidence 9999999998 4433 234455555443
No 74
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.76 E-value=1.5e-18 Score=188.70 Aligned_cols=155 Identities=18% Similarity=0.186 Sum_probs=122.4
Q ss_pred chhhhHHHHHHHHhhhHHHHHHHHHhCCC-CCCccCCCCCcHHHHHH-----HcCChhhhHHHHhCCCCCCccCCCCCcH
Q 001972 579 PNSRDKLIQNLLRNRLCEWLVWKIHEGGK-GPNVIDDGGQGVVHLAA-----ALGYEWAMRPIIATGVSPNFRDARGRTA 652 (988)
Q Consensus 579 ~~~~~~lL~~al~~~l~e~Lv~~Lle~Ga-d~n~~D~~G~TpLH~AA-----~~G~~~iV~~LL~~Gadvn~~D~~G~Tp 652 (988)
+....+.|+.|+..+..+ +++.|++.|+ +++..|..|.||||+|+ ..|+.+++++|+..|++++..|..|+||
T Consensus 108 d~~g~T~Lh~A~~~g~~~-~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tp 186 (276)
T 4hbd_A 108 DSNGNTALHYSVSHANFP-VVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTA 186 (276)
T ss_dssp CTTSCCHHHHHHHTTCHH-HHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCH
T ss_pred CCCCCCHHHHHHHCCCHH-HHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCH
Confidence 344567788888777544 5677888887 88888888889998888 5577888888888888888888888899
Q ss_pred hhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH-ccCCCCCCCCccccCcchHHH-
Q 001972 653 LHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAE-ADLSSHLSSLTVNENGMDNVA- 730 (988)
Q Consensus 653 LH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle-~Ga~~~~~~l~~~d~~~g~ta- 730 (988)
||+|+..|+.++|++|+++|++++..| ..|.||||+|+..|+.+++++|++ .| ++++..+.. |.+|
T Consensus 187 Lh~A~~~g~~~~v~~Ll~~gad~n~~d------~~G~TpLh~A~~~g~~~iv~~Ll~~~g-----ad~~~~d~~-g~TpL 254 (276)
T 4hbd_A 187 LMLAVSHGRVDVVKALLACEADVNVQD------DDGSTALMCACEHGHKEIAGLLLAVPS-----CDISLTDRD-GSTAL 254 (276)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHTSTT-----CCTTCCCTT-SCCHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCC------CCCCCHHHHHHHCCCHHHHHHHHhcCC-----CCCcCcCCC-CCCHH
Confidence 999988888899999988888888877 588899999988888889998888 78 455555555 5544
Q ss_pred ---HHHhhHHHHHHHHHcC
Q 001972 731 ---AALAAEKANETAAQIG 746 (988)
Q Consensus 731 ---a~~~~~~~v~~Lle~~ 746 (988)
+..+..++++.|+++.
T Consensus 255 ~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 255 MVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHhcc
Confidence 4455677888887765
No 75
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.76 E-value=2.4e-18 Score=171.30 Aligned_cols=124 Identities=22% Similarity=0.251 Sum_probs=115.4
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
...+.|+.++..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 35 ~g~t~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (167)
T 3v31_A 35 EGFTPLMWAAAHGQI-AVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN 113 (167)
T ss_dssp TSCCHHHHHHHTTCH-HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHCCCH-HHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC
Confidence 345678888887754 4668889999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcc
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 711 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~G 711 (988)
+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|++++
T Consensus 114 ~~~~v~~Ll~~g~~~~~~~------~~g~t~l~~A~~~~~~~~~~~L~~~~ 158 (167)
T 3v31_A 114 HVKCVKMLLESGADPTIET------DSGYNSMDLAVALGYRSVQQVIESHL 158 (167)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCcHHHHHHHHHHH
Confidence 9999999999999998887 69999999999999999999999987
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.76 E-value=2.6e-18 Score=168.87 Aligned_cols=120 Identities=23% Similarity=0.306 Sum_probs=108.5
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+. +..+. ..+++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 36 g~t~L~~-~~~~~-~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 113 (156)
T 1bd8_A 36 GKTALQV-MMFGS-TAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGH 113 (156)
T ss_dssp SCCHHHH-SCTTC-HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTC
T ss_pred CCcHHHH-HHcCC-HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhCh
Confidence 4456666 55443 346677889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHc
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEA 710 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~ 710 (988)
.+++++|++. ++++..+ ..|.||||+|+..|+.+++++|+++
T Consensus 114 ~~~v~~Ll~~-~~~~~~~------~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 114 TAVVSFLAAE-SDLHRRD------ARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHHHHHTT-SCTTCCC------TTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred HHHHHHHHhc-cCCCCcC------CCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 9999999999 8888877 6999999999999999999999873
No 77
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.76 E-value=2.4e-18 Score=166.26 Aligned_cols=123 Identities=27% Similarity=0.248 Sum_probs=107.0
Q ss_pred cCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcH
Q 001972 612 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTA 691 (988)
Q Consensus 612 ~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TP 691 (988)
....|.||||+||..|+.++|++|++.|++++.+|..|+||||+||..|+.+++++|+++|++++..+ ..|.||
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d------~~g~t~ 83 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD------AIGFTP 83 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC------TTCCCH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCC------CCCCCH
Confidence 34568899999999999999999999999999999999999999999999999999999999999887 699999
Q ss_pred HHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHhhHHHHHHHHHcC
Q 001972 692 ADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALAAEKANETAAQIG 746 (988)
Q Consensus 692 LhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~~~~~v~~Lle~~ 746 (988)
||+|+..|+.+++++|+++| .+++..+.. |.+|. ..+..++++.|++.|
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~-g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHG-----ADVNAQDKF-GKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCCcCcCCC-CCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999 445555554 55554 445678888888754
No 78
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.76 E-value=9.4e-19 Score=188.50 Aligned_cols=160 Identities=11% Similarity=0.001 Sum_probs=127.9
Q ss_pred hhhHHHHHHHHh--hhHHHHHHHHHhCCCCC-----------CccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCC
Q 001972 581 SRDKLIQNLLRN--RLCEWLVWKIHEGGKGP-----------NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA 647 (988)
Q Consensus 581 ~~~~lL~~al~~--~l~e~Lv~~Lle~Gad~-----------n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~ 647 (988)
...+.|+.|+.. .-...+++.|++.|+++ ...|..|.||||+||..|+.++|++|+++|++++.++.
T Consensus 53 ~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 132 (273)
T 2pnn_A 53 TGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAAN 132 (273)
T ss_dssp TCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBC
T ss_pred CCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcccc
Confidence 345678888763 11233455666666542 22567899999999999999999999999999999997
Q ss_pred --------------CCCcHhhHHHhcCCHHHHHHHHH---cCCCCCccCCCCCCCCCCCcHHHHHHHcCc---------H
Q 001972 648 --------------RGRTALHWASYFGREETVIMLVK---LGAAPGAVEDPTPAFPGGQTAADLASSRGH---------K 701 (988)
Q Consensus 648 --------------~G~TpLH~Aa~~G~~eiV~~LL~---~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~---------~ 701 (988)
.|+||||+|+..|+.++|++|++ +|++++.++ ..|.||||+|+..|+ .
T Consensus 133 ~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d------~~g~tpLh~A~~~~~~~~~~~~~~~ 206 (273)
T 2pnn_A 133 GDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARD------SVGNTVLHALVEVADNTVDNTKFVT 206 (273)
T ss_dssp SGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC------TTSCCHHHHHHHHCCSCHHHHHHHH
T ss_pred ccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeC------CCCCcHHHHHHHccCcchhHHHHHH
Confidence 79999999999999999999999 999999887 699999999999998 8
Q ss_pred HHHHHHHHccCCCCC--CCCccccCcchHHHH----HHhhHHHHHHHHHcCC
Q 001972 702 GIAGYLAEADLSSHL--SSLTVNENGMDNVAA----ALAAEKANETAAQIGV 747 (988)
Q Consensus 702 eiv~~Lle~Ga~~~~--~~l~~~d~~~g~taa----~~~~~~~v~~Lle~~a 747 (988)
+++++|++.|++.+. ..++..+.. |.+|+ ..++.++++.|++.++
T Consensus 207 ~~v~~Ll~~ga~~n~~~~~~~~~d~~-g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 207 SMYNEILILGAKLHPTLKLEEITNRK-GLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp HHHHHHHHHHHHHCTTCCGGGCCCTT-SCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhcccccccccccCCC-CCCHHHHHHHhChHHHHHHHHHCCC
Confidence 999999999955432 011235555 66554 4557899999999997
No 79
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.75 E-value=2.1e-18 Score=163.59 Aligned_cols=115 Identities=26% Similarity=0.233 Sum_probs=102.5
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
..++.|+.++..+..+ +++.|++.|+++|..|..|+||||+||..|+.+++++|++.|+++|.+|..|+||||+|+..|
T Consensus 6 ~~~~~l~~A~~~~~~~-~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~ 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLD-EVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG 84 (123)
T ss_dssp -CHHHHHHHHHTTCHH-HHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred ccchHHHHHHHcCCHH-HHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence 3457788888888554 456788999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHH
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKG 702 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~e 702 (988)
+.+++++|+++|++++..+ ..|.||||+|...+..+
T Consensus 85 ~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 85 HVSCVKLLLSKGADKTVKG------PDGLTAFEATDNQAIKA 120 (123)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTSCCHHHHCCCHHHHH
T ss_pred CHHHHHHHHHcCCCCCCcC------CCCCCHHHHhCCHHHHH
Confidence 9999999999999999887 69999999995444333
No 80
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.75 E-value=1.4e-18 Score=194.90 Aligned_cols=154 Identities=20% Similarity=0.205 Sum_probs=132.3
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhC----CCCCCc-----------------cCCCCCcHHHHHHHcC--ChhhhHHHHh
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEG----GKGPNV-----------------IDDGGQGVVHLAAALG--YEWAMRPIIA 637 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~----Gad~n~-----------------~D~~G~TpLH~AA~~G--~~~iV~~LL~ 637 (988)
...+.|+.++..+.. .+++.|++. |++++. .|..|.||||+||..| +.++|++|++
T Consensus 83 ~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~ 161 (364)
T 3ljn_A 83 HGQKPIHLAVMANKT-DLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161 (364)
T ss_dssp TTBCHHHHHHHTTCH-HHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCH-HHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH
Confidence 345678888887644 345666666 888777 8899999999999999 9999999999
Q ss_pred CCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCC-----CCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccC
Q 001972 638 TGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAA-----PGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADL 712 (988)
Q Consensus 638 ~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd-----~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga 712 (988)
.|++++.+|..|+||||+|+..|+.++|++|+++|++ ++..+ ..|.||||+|+..|+.+++++|+++|
T Consensus 162 ~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~------~~g~t~L~~A~~~g~~~~v~~Ll~~g- 234 (364)
T 3ljn_A 162 LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN------KQGNSHLHWAILINWEDVAMRFVEMG- 234 (364)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC------TTCCCTTHHHHTTTCHHHHHHHHTTT-
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccC------CCCCcHHHHHHHcCCHHHHHHHHHcC-
Confidence 9999999999999999999999999999999999999 66665 79999999999999999999999999
Q ss_pred CCCCCCCccccCcchHHHH----HHhhHHHHHHHHHcCC
Q 001972 713 SSHLSSLTVNENGMDNVAA----ALAAEKANETAAQIGV 747 (988)
Q Consensus 713 ~~~~~~l~~~d~~~g~taa----~~~~~~~v~~Lle~~a 747 (988)
++++..+.. |.+|+ ..++.++|+.|++.++
T Consensus 235 ----ad~~~~d~~-g~tpL~~A~~~g~~~~v~~Ll~~~~ 268 (364)
T 3ljn_A 235 ----IDVNMEDNE-HTVPLYLSVRAAMVLLTKELLQKTD 268 (364)
T ss_dssp ----CCTTCCCTT-SCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred ----CCCCCCCCC-CCCHHHHHHHhChHHHHHHHHHcCC
Confidence 555566665 66554 4557899999999986
No 81
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.75 E-value=1.8e-18 Score=188.87 Aligned_cols=152 Identities=12% Similarity=0.038 Sum_probs=132.8
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCC-CcHhhHHHhcC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARG-RTALHWASYFG 660 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G-~TpLH~Aa~~G 660 (988)
..+.|+.|+..+.. .+++.|++.|+++|..|..|+||||+|+..|+.+++++|+++|++++.+|..| .||||+|+..|
T Consensus 62 g~t~L~~A~~~g~~-~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~ 140 (285)
T 3kea_A 62 NEFPLHQAATLEDT-KIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLN 140 (285)
T ss_dssp TCCHHHHHTTSSSC-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTT
T ss_pred CCCHHHHHHHcCCH-HHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcC
Confidence 35788888887744 46688899999999999999999999999999999999999999999999999 79999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcch-----HHHHHHhh
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMD-----NVAAALAA 735 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g-----~taa~~~~ 735 (988)
+.+++++|+++|+++... ..|.||||+|+..|+.+++++|+++|+ +++..+.. | ..|+..+.
T Consensus 141 ~~~~v~~Ll~~g~~~~~~-------~~g~t~L~~A~~~g~~~~v~~Ll~~ga-----d~n~~~~~-g~t~~L~~A~~~~~ 207 (285)
T 3kea_A 141 DVSIVSYFLSEIPSTFDL-------AILLSCIHITIKNGHVDMMILLLDYMT-----STNTNNSL-LFIPDIKLAIDNKD 207 (285)
T ss_dssp CHHHHHHHHTTSCTTCCC-------STHHHHHHHHHHTTCHHHHHHHHHHHH-----HTCTTCCC-BCCTTHHHHHHHTC
T ss_pred CHHHHHHHHhCCCccccc-------cCCccHHHHHHHcChHHHHHHHHHcCC-----CCCcccCC-CCChHHHHHHHcCC
Confidence 999999999999877322 289999999999999999999999994 45555544 4 35667778
Q ss_pred HHHHHHHHHcCC
Q 001972 736 EKANETAAQIGV 747 (988)
Q Consensus 736 ~~~v~~Lle~~a 747 (988)
.++++.|++.++
T Consensus 208 ~~~v~~Ll~~ga 219 (285)
T 3kea_A 208 IEMLQALFKYDI 219 (285)
T ss_dssp HHHHHHHTTSCB
T ss_pred HHHHHHHHHcCC
Confidence 999999999998
No 82
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.75 E-value=6.6e-18 Score=158.63 Aligned_cols=121 Identities=26% Similarity=0.361 Sum_probs=108.3
Q ss_pred CCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHH
Q 001972 615 GGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADL 694 (988)
Q Consensus 615 ~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhl 694 (988)
+|+||||+|+..|+.+++++|++.|++++..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~------~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD------KNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC------TTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccC------CCCCcHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999998887 699999999
Q ss_pred HHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHhhHHHHHHHHHcCC
Q 001972 695 ASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALAAEKANETAAQIGV 747 (988)
Q Consensus 695 Aa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~~~~~v~~Lle~~a 747 (988)
|+..|+.+++++|++.|+ +++..+.. |.+|. ..+..++++.|++.|+
T Consensus 75 A~~~~~~~~~~~Ll~~g~-----~~~~~~~~-g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGA-----DVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHTTCHHHHHHHHHTTC-----CTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHcChHHHHHHHHHcCC-----CCcccCCC-CCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999999994 45555554 55554 4457889999998875
No 83
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.75 E-value=1e-17 Score=185.94 Aligned_cols=151 Identities=19% Similarity=0.118 Sum_probs=131.7
Q ss_pred hHHHHHHHHhhhHHHHHHHHH-hCCCCCCccCCCCCcHHHHHHHcCCh----hhhHHHHhCCCCCCccCCCCCcHhhHHH
Q 001972 583 DKLIQNLLRNRLCEWLVWKIH-EGGKGPNVIDDGGQGVVHLAAALGYE----WAMRPIIATGVSPNFRDARGRTALHWAS 657 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Ll-e~Gad~n~~D~~G~TpLH~AA~~G~~----~iV~~LL~~Gadvn~~D~~G~TpLH~Aa 657 (988)
.+.|+.|+..+..+ +++.|+ +.|+++|..|..|.|+||+++..+.. .++++|+++|+++|.+|..|+||||+|+
T Consensus 169 ~T~L~~A~~~g~~~-~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~ 247 (337)
T 4g8k_A 169 ATALMDAAEKGHVE-VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAV 247 (337)
T ss_dssp CCHHHHHHHHTCHH-HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcHHHHHHHCCCHH-HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 46788898887554 556666 57999999999999999998877653 5789999999999999999999999999
Q ss_pred hcCCHHHHHHHHHc-CCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhhH
Q 001972 658 YFGREETVIMLVKL-GAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAE 736 (988)
Q Consensus 658 ~~G~~eiV~~LL~~-GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~~ 736 (988)
..|+.++|+.|+.. |++++.+| ..|+||||+|+..|+.++|++|+++|+ +++.++. ...|+..++.
T Consensus 248 ~~~~~~~v~~Ll~~~~~~vn~~d------~~G~TpL~~A~~~g~~~iv~~Ll~~GA-----d~n~~~~--L~~A~~~~~~ 314 (337)
T 4g8k_A 248 EKKHLGLVQRLLEQEHIEINDTD------SDGKTALLLAVELKLKKIAELLCKRGA-----STDCGDL--VMTARRNYDH 314 (337)
T ss_dssp HTTCHHHHHHHHTSTTCCTTCBC------TTSCBHHHHHHHTTCHHHHHHHHTTSC-----SSTTCCH--HHHHHHTTCH
T ss_pred HhhhhHHHHHHHHhcCCcccCcC------CCCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCCCH--HHHHHHcCCH
Confidence 99999999999985 89999888 699999999999999999999999995 4455442 6678888899
Q ss_pred HHHHHHHHcCC
Q 001972 737 KANETAAQIGV 747 (988)
Q Consensus 737 ~~v~~Lle~~a 747 (988)
++|+.|+++||
T Consensus 315 ~iv~~Ll~~GA 325 (337)
T 4g8k_A 315 SLVKVLLSHGA 325 (337)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCcC
Confidence 99999999998
No 84
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.75 E-value=1.5e-18 Score=184.22 Aligned_cols=128 Identities=25% Similarity=0.199 Sum_probs=115.5
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.++..+.. .+++.|++.|+++|..|..|+||||+||..|+.++|++|+++|+++|.+|..|+||||+||..|+
T Consensus 37 ~~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~ 115 (239)
T 1ycs_B 37 PLALLLDSSLEGEF-DLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNN 115 (239)
T ss_dssp CHHHHHHHHHHTCH-HHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred hhHHHHHHHHcCCH-HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 35778888888755 45677899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHH--HHcCcHHHHHHHHHccCCCC
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLA--SSRGHKGIAGYLAEADLSSH 715 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlA--a~~G~~eiv~~Lle~Ga~~~ 715 (988)
.++|++|+++|++++..+. ..+.||||+| +..|+.+++++|++.|++..
T Consensus 116 ~~~v~~Ll~~ga~~~~~~~-----~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~ 166 (239)
T 1ycs_B 116 VQVCKFLVESGAAVFAMTY-----SDMQTAADKCEEMEEGYTQCSQFLYGVQEKMG 166 (239)
T ss_dssp HHHHHHHHHTTCCTTCCCS-----SSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCcceecC-----CCCcchHHHHHHhhhccHHHHHHHHHhhhccc
Confidence 9999999999999999884 3344999999 78899999999999995544
No 85
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.74 E-value=3.3e-18 Score=169.24 Aligned_cols=125 Identities=20% Similarity=0.242 Sum_probs=108.4
Q ss_pred CccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCC
Q 001972 610 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQ 689 (988)
Q Consensus 610 n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~ 689 (988)
+..+..|.||||+||..|+.++|++|++.|++++.+|..|+||||+|+ .|+.+++++|+++|++++..+ ..|.
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d------~~g~ 78 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCAD------PATL 78 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCC------TTTC
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcC------CCCC
Confidence 456788999999999999999999999999999999999999999986 999999999999999999887 6899
Q ss_pred c-HHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH----HHHHHhhHHHHHHHHHcCC
Q 001972 690 T-AADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN----VAAALAAEKANETAAQIGV 747 (988)
Q Consensus 690 T-PLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~----taa~~~~~~~v~~Lle~~a 747 (988)
| |||+|+..|+.+++++|+++| ++++..+.. |. .|+..+..++++.|++.++
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~-g~tpl~~A~~~~~~~~v~~Ll~~ga 135 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAG-----ARLDVRDAW-GRLPVDLAEELGHRDVARYLRAAAG 135 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHT-----CCSSCCCTT-CCCHHHHHHHHTCHHHHHHHSSCC-
T ss_pred cHHHHHHHHCCCHHHHHHHHHcC-----CCCcccCCC-CCCHHHHHHHhCHHHHHHHHHHcCC
Confidence 9 999999999999999999999 455555554 55 4555567899999999987
No 86
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.74 E-value=1.7e-18 Score=180.88 Aligned_cols=127 Identities=18% Similarity=0.185 Sum_probs=108.9
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhC-CCCCCccCCCCCcHhhHHHhcC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIAT-GVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~-Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
..+.|+.++..+..+ +++.|++.|+++|..|..|+||||+||..|+.++|++|++. |+++|.+|..|+||||+|+..|
T Consensus 73 g~t~L~~A~~~g~~~-~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLS-WLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp ESCHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred cccccccccccCcHH-HHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 356788888887554 55778899999999999999999999999999999999999 9999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCC
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSH 715 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~ 715 (988)
+.++|++|+++|++++..+ ..|.||||+|+..|+.++++.|++.|+...
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~------~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRN------IEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCC------TTSCCHHHHCCSHHHHHHHC----------
T ss_pred CHHHHHHHHHcCCCCcccc------CCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 9999999999999999887 699999999999999999999999995443
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.74 E-value=8.8e-19 Score=169.11 Aligned_cols=125 Identities=20% Similarity=0.186 Sum_probs=111.5
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
....+.|+.++..+..+ +++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..
T Consensus 8 ~~g~t~L~~A~~~~~~~-~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 86 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIP-SVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKN 86 (137)
T ss_dssp TTCCCHHHHHHHHTCHH-HHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHH-HHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHc
Confidence 34457889888887544 55778899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHcc
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEAD 711 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~G 711 (988)
|+.+++++|+++|++++.++ ..|.||||+|+..++.+++.+|.+.+
T Consensus 87 ~~~~~v~~Ll~~ga~~~~~~------~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 87 GHVDIVKLLLSYGASRNAVN------IFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp TCHHHHHHHHHTTCCTTCCC------TTSCCGGGGCCCHHHHHHHSCC----
T ss_pred CCHHHHHHHHHcCCCCCCCC------CCCCCHHHHHhhccHHHHHhhccccc
Confidence 99999999999999999887 69999999999999999998887765
No 88
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.74 E-value=2.3e-17 Score=171.96 Aligned_cols=153 Identities=22% Similarity=0.253 Sum_probs=127.5
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCC-CCCcHhhHHHhcC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDA-RGRTALHWASYFG 660 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~-~G~TpLH~Aa~~G 660 (988)
..+.|+.|+..+..+ +++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++..+. .|+||||+|+..|
T Consensus 9 ~~~~l~~A~~~g~~~-~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 9 STWDIVKATQYGIYE-RCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GGCCHHHHHHTTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred cchHHHHHHHcCChH-HHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 345577788877554 45778889999999999999999999999999999999999999886554 4999999999999
Q ss_pred CHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhh-----
Q 001972 661 REETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA----- 735 (988)
Q Consensus 661 ~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~----- 735 (988)
+.+++++|++.|++++..+ ..|.||||+|+..|+.+++++|++.| .+++..+.. |.+|...+.
T Consensus 88 ~~~~v~~Ll~~g~~~~~~~------~~g~t~l~~A~~~~~~~~~~~Ll~~~-----~~~~~~~~~-g~t~l~~a~~~~~~ 155 (240)
T 3eu9_A 88 HLSMVVQLMKYGADPSLID------GEGCSCIHLAAQFGHTSIVAYLIAKG-----QDVDMMDQN-GMTPLMWAAYRTHS 155 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHHCCS
T ss_pred CHHHHHHHHHcCCCCcccC------CCCCCHHHHHHHcCHHHHHHHHHhcC-----CCccccCCC-CCcHHHHHHHhCCh
Confidence 9999999999999998877 68999999999999999999999998 445555555 666655544
Q ss_pred HHHHHHHHHcCC
Q 001972 736 EKANETAAQIGV 747 (988)
Q Consensus 736 ~~~v~~Lle~~a 747 (988)
..+++.|++.++
T Consensus 156 ~~~~~~L~~~~~ 167 (240)
T 3eu9_A 156 VDPTRLLLTFNV 167 (240)
T ss_dssp STTHHHHHHTTC
T ss_pred HHHHHHHHhcCC
Confidence 577888888886
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.74 E-value=1.8e-18 Score=177.95 Aligned_cols=146 Identities=11% Similarity=-0.056 Sum_probs=118.6
Q ss_pred HHHHHHhhhHHHHHHHHHhCCCCCCccC-CCCCcHHHHHHHcCCh----hhhHHHHhCCCCCCccCCCCCcHhhHHHhcC
Q 001972 586 IQNLLRNRLCEWLVWKIHEGGKGPNVID-DGGQGVVHLAAALGYE----WAMRPIIATGVSPNFRDARGRTALHWASYFG 660 (988)
Q Consensus 586 L~~al~~~l~e~Lv~~Lle~Gad~n~~D-~~G~TpLH~AA~~G~~----~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G 660 (988)
|+.+++.+..+.+.. ++..+ ++..+ ..|+||||+|+..|+. +++++||++|+++|.+|..|+||||+|+..|
T Consensus 10 l~~Aa~~g~~~~~~~-l~~~~--~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~ 86 (186)
T 3t8k_A 10 VSAAAMLGTYEDFLE-LFEKG--YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGG 86 (186)
T ss_dssp HHHHHHHSCHHHHHH-HHHHS--SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHC
T ss_pred HHHHHHcCCHHHHHH-HHhcC--cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 455666666665543 44444 55566 7899999999999975 4899999999999999999999999999999
Q ss_pred C------HHHHHHHHHcCCCCCccCCCCCCCCCCC-cHHHHHHHcC-----cHHHHHHHHH-ccCCCCCCCCccccCcch
Q 001972 661 R------EETVIMLVKLGAAPGAVEDPTPAFPGGQ-TAADLASSRG-----HKGIAGYLAE-ADLSSHLSSLTVNENGMD 727 (988)
Q Consensus 661 ~------~eiV~~LL~~GAd~n~~dd~~~~d~~G~-TPLhlAa~~G-----~~eiv~~Lle-~Ga~~~~~~l~~~d~~~g 727 (988)
+ .++|++|+++||++|.+| ..|. ||||+|+..| +.+++++|++ +| ++++.++.. |
T Consensus 87 ~~~~~~~~~iv~~Ll~~Gadin~~d------~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~g-----ad~~~~d~~-G 154 (186)
T 3t8k_A 87 GNDITGTTELCKIFLEKGADITALY------KPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSG-----LQLLIKDKW-G 154 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCCSSSCB------GGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTT-----CCTTCCCTT-S
T ss_pred CcchhhHHHHHHHHHHCCCCCCccC------CCcCchHHHHHHHcCCChhhHHHHHHHHHHhcC-----CCCcccCCC-C
Confidence 7 578999999999999988 6899 9999999954 4579999999 99 677777777 8
Q ss_pred HHHHHHh----hHHHHHHHHHcC
Q 001972 728 NVAAALA----AEKANETAAQIG 746 (988)
Q Consensus 728 ~taa~~~----~~~~v~~Lle~~ 746 (988)
.+|++.+ ...+|+.|.+..
T Consensus 155 ~TpL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 155 LTALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp CCHHHHHHTTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHHH
Confidence 8777665 456777776543
No 90
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.74 E-value=8e-18 Score=198.49 Aligned_cols=129 Identities=26% Similarity=0.278 Sum_probs=113.0
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCCCCcc------CCCCCcHHHHHHH---cCChhhhHHHHhCCCCCCccCCCCCcHhh
Q 001972 584 KLIQNLLRNRLCEWLVWKIHEGGKGPNVI------DDGGQGVVHLAAA---LGYEWAMRPIIATGVSPNFRDARGRTALH 654 (988)
Q Consensus 584 ~lL~~al~~~l~e~Lv~~Lle~Gad~n~~------D~~G~TpLH~AA~---~G~~~iV~~LL~~Gadvn~~D~~G~TpLH 654 (988)
..|+.|+..+..+. +..|++.|+++|.. |..|.||||+||. .|+.++|++||++|+++|.+|..|+||||
T Consensus 134 ~~L~~A~~~g~~~~-v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLS-VLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHH-HHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHH-HHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 55788888776554 46688999999987 8899999999976 89999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCC
Q 001972 655 WASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSL 719 (988)
Q Consensus 655 ~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l 719 (988)
+||..|+.++|++|+++||+++.+| ..|.||||+|+..|+.+++++|+++|++.+...+
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d------~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~ 271 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVN------EAGETALDIARKKHHKECEELLEQAQAGTFAFPL 271 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCC------TTCCCHHHHHHHTTCHHHHHHHHHTCC-------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcc
Confidence 9999999999999999999999988 6999999999999999999999999976655433
No 91
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.74 E-value=1.7e-17 Score=181.38 Aligned_cols=125 Identities=17% Similarity=0.160 Sum_probs=111.3
Q ss_pred HHHHHHHHhhhHHHHHHHHHhCCCCCC------ccCCCCCcHHHHHHHc---CChhhhHHHHhCCCCCCccCCCCCcHhh
Q 001972 584 KLIQNLLRNRLCEWLVWKIHEGGKGPN------VIDDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTALH 654 (988)
Q Consensus 584 ~lL~~al~~~l~e~Lv~~Lle~Gad~n------~~D~~G~TpLH~AA~~---G~~~iV~~LL~~Gadvn~~D~~G~TpLH 654 (988)
..|+.++..+..+.+ ..++..|++++ ..|..|+||||+||.. |+.+++++|+++|+++|.+|..|+||||
T Consensus 132 ~~l~~a~~~~d~~~~-~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh 210 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGL-LQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALH 210 (278)
T ss_dssp HHHHHHHHTTCHHHH-HHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHH
T ss_pred hhhhhHhhhcccHHH-HHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHH
Confidence 446677777766554 55788899854 4488999999999999 8999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCC
Q 001972 655 WASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSH 715 (988)
Q Consensus 655 ~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~ 715 (988)
+|+..|+.++|++|+++|++++.+| ..|.||||+|+..|+.+++++|+++|+...
T Consensus 211 ~A~~~g~~~~v~~Ll~~gad~~~~d------~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 211 YCCLTDNAECLKLLLRGKASIEIAN------ESGETPLDIAKRLKHEHCEELLTQALSGRF 265 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcc------CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999988 699999999999999999999999996543
No 92
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.73 E-value=1.3e-17 Score=189.00 Aligned_cols=179 Identities=18% Similarity=0.080 Sum_probs=144.4
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCC---CCCCccCCCCCcHhhHH
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATG---VSPNFRDARGRTALHWA 656 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~G---advn~~D~~G~TpLH~A 656 (988)
....+.|+.|+..+.. .+++.|++.|++++..|..|.||||+|+..|+.+++++|++.| ++++..|..|+||||+|
T Consensus 164 ~~g~TpL~~A~~~g~~-~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A 242 (373)
T 2fo1_E 164 CDENTPLMLAVLARRR-RLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIV 242 (373)
T ss_dssp TTSCCHHHHHHHHTCH-HHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHcChH-HHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHH
Confidence 3446789999888744 4678899999999999999999999999999999999999998 89999999999999999
Q ss_pred HhcC---CHHHHHHHHHcCCCCCccCC--CCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchH---
Q 001972 657 SYFG---REETVIMLVKLGAAPGAVED--PTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDN--- 728 (988)
Q Consensus 657 a~~G---~~eiV~~LL~~GAd~n~~dd--~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~--- 728 (988)
+..| +.+++++|+++|++++..+. .+..|..|.||||+|+..|+.+++++|++.|. .+++..+.. |.
T Consensus 243 ~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~----~~~n~~d~~-g~TpL 317 (373)
T 2fo1_E 243 AHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG----SNKDKQDED-GKTPI 317 (373)
T ss_dssp HHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSC----CCTTCCCTT-CCCHH
T ss_pred HHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcC----CCccCcCCC-CCCHH
Confidence 9998 89999999999999987321 12234799999999999999999999998761 344555554 55
Q ss_pred -HHHHHhhHHHHHHHHHcCC-CCCCCchhhhhhhhhhHHHhhhhh
Q 001972 729 -VAAALAAEKANETAAQIGV-QSDGPAAEQLSLRGSLAAVRKSAH 771 (988)
Q Consensus 729 -taa~~~~~~~v~~Lle~~a-~~~~~~~~~lslkdsL~AvR~a~~ 771 (988)
.|+..++.++|+.|++.++ .+.. ...+.+++..|..
T Consensus 318 ~~A~~~g~~~iv~~Ll~~gad~~~~-------d~~g~t~l~~A~~ 355 (373)
T 2fo1_E 318 MLAAQEGRIEVVMYLIQQGASVEAV-------DATDHTARQLAQA 355 (373)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCSSCC-------CSSSCCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCccCC-------CCCCCCHHHHHHH
Confidence 4556668899999999997 4333 2344566655543
No 93
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.73 E-value=5.1e-18 Score=172.51 Aligned_cols=139 Identities=24% Similarity=0.274 Sum_probs=116.6
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccC-CCCCcHhhHHHh
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASY 658 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D-~~G~TpLH~Aa~ 658 (988)
....+.|+.++..+..+ +++.|++ |+++|..|..|+||||+||..|+.+++++|+++|+++|.+| ..|+||||+|+.
T Consensus 42 ~~g~t~L~~A~~~g~~~-~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 42 SEYETPWWTAARKADEQ-ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHHTTCHH-HHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHH-HHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHh
Confidence 34568899999888555 4566777 99999999999999999999999999999999999999998 889999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhhHHH
Q 001972 659 FGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKA 738 (988)
Q Consensus 659 ~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~~~~ 738 (988)
.|+.+++++|+++|++++.++ ..|.||||+|+..++.+.+. .. ...++..+..++
T Consensus 120 ~~~~~~v~~Ll~~ga~~~~~d------~~g~tpl~~A~~~~~~~~~~------------------~~-l~~a~~~~~~~i 174 (183)
T 3deo_A 120 YVRPEVVEALVELGADIEVED------ERGLTALELAREILKTTPKG------------------NP-MQFGRRIGLEKV 174 (183)
T ss_dssp TTCHHHHHHHHHHTCCTTCCC------TTSCCHHHHHHHHHHTCCCC------------------SH-HHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCCcCCC------CCCCCHHHHHHHhccCcccc------------------cH-HHHHHHcCHHHH
Confidence 999999999999999999887 69999999998765432111 11 345567777788
Q ss_pred HHHHHHc
Q 001972 739 NETAAQI 745 (988)
Q Consensus 739 v~~Lle~ 745 (988)
++.|.++
T Consensus 175 ~~~L~~~ 181 (183)
T 3deo_A 175 INVLEGQ 181 (183)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 8887654
No 94
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.73 E-value=2.6e-18 Score=191.33 Aligned_cols=149 Identities=13% Similarity=0.086 Sum_probs=123.8
Q ss_pred chhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCC---hhhhHHHHhCC-CCCCccCCCCCcHhh
Q 001972 579 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGY---EWAMRPIIATG-VSPNFRDARGRTALH 654 (988)
Q Consensus 579 ~~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~---~~iV~~LL~~G-advn~~D~~G~TpLH 654 (988)
+....+.||.|+..+. ..+++.|+++|+++|.+|..|+||||+|+..|+ .++++.|++.+ ++++.+|..|+||||
T Consensus 128 d~~g~TpLh~Aa~~g~-~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh 206 (327)
T 1sw6_A 128 DEHGNTPLHWLTSIAN-LELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILH 206 (327)
T ss_dssp STTCCCHHHHHHHTTC-HHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHH
T ss_pred CCCCCcHHHHHHHcCC-HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHH
Confidence 3345678999999884 456788999999999999999999999999999 78899999886 889999999999999
Q ss_pred HHHh----cCCHHHHHHHHHc--------------------CCCCCccC-------------------CCCCCCCCCCcH
Q 001972 655 WASY----FGREETVIMLVKL--------------------GAAPGAVE-------------------DPTPAFPGGQTA 691 (988)
Q Consensus 655 ~Aa~----~G~~eiV~~LL~~--------------------GAd~n~~d-------------------d~~~~d~~G~TP 691 (988)
+|+. .|+.+++++|++. |++++..+ +++.+|..|+||
T Consensus 207 ~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~Tp 286 (327)
T 1sw6_A 207 HIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC 286 (327)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCH
T ss_pred HHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCH
Confidence 9999 8999999999987 55555443 245566899999
Q ss_pred HHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHh
Q 001972 692 ADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA 734 (988)
Q Consensus 692 LhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~ 734 (988)
||+|+..|+.+++++|+++| ++++.++.. |.+|++++
T Consensus 287 Lh~A~~~g~~~~v~~Ll~~G-----ad~~~~d~~-G~TpL~~A 323 (327)
T 1sw6_A 287 LNIAARLGNISIVDALLDYG-----ADPFIANKS-GLRPVDFG 323 (327)
T ss_dssp HHHHHHHCCHHHHHHHHHTT-----CCTTCCCTT-SCCGGGGT
T ss_pred HHHHHHcCCHHHHHHHHHcC-----CCCcccCCC-CCCHHHHH
Confidence 99999999999999999999 667777777 88887665
No 95
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.73 E-value=2.4e-17 Score=171.80 Aligned_cols=154 Identities=20% Similarity=0.248 Sum_probs=110.3
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.++..+..+ +++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 76 ~~t~L~~A~~~~~~~-~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 76 NSTPLHWATRQGHLS-MVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp TBCHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred CCChhHHHHHcCCHH-HHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC
Confidence 345677777766443 4566777788888788888888888888888888888888888888888888888888886665
Q ss_pred -HHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHH----HHHhhH
Q 001972 662 -EETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAE 736 (988)
Q Consensus 662 -~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta----a~~~~~ 736 (988)
.+++++|++.|++++..+. ..|.||||+|+..|+.+++++|+++| .+++..+.. |.+| ...+..
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~-----~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~-g~t~l~~A~~~~~~ 223 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDK-----YHKNTALHWAVLAGNTTVISLLLEAG-----ANVDAQNIK-GESALDLAKQRKNV 223 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCT-----TTCCCHHHHHHHHTCHHHHHHHHHHT-----CCTTCBCTT-SCBHHHHHHHTTCH
T ss_pred hHHHHHHHHhcCCCcchhhc-----cCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCC-CCCHHHHHHHcCcH
Confidence 6778888888888777662 37778888888888888888888887 344444444 4433 444466
Q ss_pred HHHHHHHHcCC
Q 001972 737 KANETAAQIGV 747 (988)
Q Consensus 737 ~~v~~Lle~~a 747 (988)
++++.|++.++
T Consensus 224 ~~v~~L~~~~~ 234 (240)
T 3eu9_A 224 WMINHLQEARQ 234 (240)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHhhh
Confidence 77777777764
No 96
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.72 E-value=9.7e-18 Score=177.73 Aligned_cols=136 Identities=17% Similarity=0.068 Sum_probs=112.6
Q ss_pred HHHHhCCCCCCccC---CCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCC
Q 001972 600 WKIHEGGKGPNVID---DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPG 676 (988)
Q Consensus 600 ~~Lle~Gad~n~~D---~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n 676 (988)
+.|++.|++++..+ ..|.||||+||..|+.++|++|++.|+++|.+|..|+||||+||..|+.++|++|+++|++++
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n 81 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN 81 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 45777888887654 456788999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccC-cchHHHHHH------hhHHHHHHHHHcCC
Q 001972 677 AVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNEN-GMDNVAAAL------AAEKANETAAQIGV 747 (988)
Q Consensus 677 ~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~-~~g~taa~~------~~~~~v~~Lle~~a 747 (988)
..+ ..|.||||+|+..|+.+++++|++.|+ +++..++ . |.+|+.. +..++++.|++.++
T Consensus 82 ~~d------~~g~tpLh~A~~~g~~~~v~~Ll~~ga-----~~~~~~~~~-g~tpL~~A~a~~~~~~~~v~~Ll~~ga 147 (229)
T 2vge_A 82 SPD------SHGWTPLHCAASCNDTVICMALVQHGA-----AIFATTLSD-GATAFEKCDPYREGYADCATYLADVEQ 147 (229)
T ss_dssp CCC------TTCCCHHHHHHHTTCHHHHHHHHTTTC-----CTTCCCSST-TCCTGGGCCTTSTTHHHHHHHHHHHHH
T ss_pred CCC------CCCCCHHHHHHHcCCHHHHHHHHHcCC-----CcccccCCC-CCCHHHHHHHHhcChHHHHHHHHHcCC
Confidence 887 699999999999999999999999994 4554432 3 5555444 57899999999987
No 97
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.72 E-value=5.1e-18 Score=158.75 Aligned_cols=104 Identities=28% Similarity=0.362 Sum_probs=96.9
Q ss_pred ccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCc
Q 001972 611 VIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQT 690 (988)
Q Consensus 611 ~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~T 690 (988)
.+|..|+||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++..+ ..|.|
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d------~~g~t 77 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS------KDGNT 77 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCC------TTCCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccC------CCCCC
Confidence 478899999999999999999999999999999999999999999999999999999999999999887 69999
Q ss_pred HHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCc
Q 001972 691 AADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG 725 (988)
Q Consensus 691 PLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~ 725 (988)
|||+|+..|+.+++++|+++| ++++..+..
T Consensus 78 pl~~A~~~~~~~~~~~Ll~~g-----a~~n~~~~~ 107 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDAKG-----ADVNARSWG 107 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHTTS-----SSHHHHSCC
T ss_pred HHHHHHHCCCHHHHHHHHHcC-----CCCCcCCcc
Confidence 999999999999999999999 555555554
No 98
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.72 E-value=1.6e-17 Score=177.38 Aligned_cols=139 Identities=24% Similarity=0.270 Sum_probs=114.1
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccC-CCCCcHhhHHHh
Q 001972 580 NSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRD-ARGRTALHWASY 658 (988)
Q Consensus 580 ~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D-~~G~TpLH~Aa~ 658 (988)
....+.|+.++..+..+ +++.|++ |+++|..|..|+||||+||..|+.++|++|+++|+++|.+| ..|+||||+||.
T Consensus 43 ~~g~t~L~~A~~~g~~~-~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQ-ALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHTTTCHH-HHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHH-HHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 34568899999888655 5567777 99999999999999999999999999999999999999998 789999999999
Q ss_pred cCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhhHHH
Q 001972 659 FGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAAEKA 738 (988)
Q Consensus 659 ~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~~~~ 738 (988)
.|+.++|++|+++|++++..+ ..|.||||+|+..++. ...... ...++..++.++
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d------~~g~t~l~~A~~~~~~------------------~~~~~~-l~~a~~~g~~~i 175 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVED------ERGLTALELAREILKT------------------TPKGNP-MQFGRRIGLEKV 175 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCC------TTCCCHHHHHHHHHTT------------------CCCSSH-HHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCCCCCC------CCCCcHHHHHHHHHhc------------------cCCCCH-HHHHHHcChHHH
Confidence 999999999999999999887 6999999999852211 011121 445566666777
Q ss_pred HHHHHHc
Q 001972 739 NETAAQI 745 (988)
Q Consensus 739 v~~Lle~ 745 (988)
++.|.+.
T Consensus 176 v~~L~~~ 182 (244)
T 3ui2_A 176 INVLEGQ 182 (244)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777664
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.72 E-value=5.4e-18 Score=177.12 Aligned_cols=124 Identities=22% Similarity=0.182 Sum_probs=106.3
Q ss_pred cCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHc-CCCCCccCCCCCCCCCCCc
Q 001972 612 IDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKL-GAAPGAVEDPTPAFPGGQT 690 (988)
Q Consensus 612 ~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~-GAd~n~~dd~~~~d~~G~T 690 (988)
.|..|.||||+||..|+.++|+.|++.|++++.+|..|+||||+||..|+.++|++|++. |++++..+ ..|.|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d------~~g~t 142 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQN------KLGDT 142 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCC------TTSCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccC------CCCCC
Confidence 477899999999999999999999999999999999999999999999999999999999 99999887 69999
Q ss_pred HHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHh----hHHHHHHHHHcCC
Q 001972 691 AADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALA----AEKANETAAQIGV 747 (988)
Q Consensus 691 PLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~----~~~~v~~Lle~~a 747 (988)
|||+|+..|+.+++++|+++| ++++..+.. |.+|...+ ..++++.|++.++
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~g-----a~~~~~~~~-g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKG-----ARTDLRNIE-KKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHT-----CCSCCCCTT-SCCHHHHCCSHHHHHHHC-------
T ss_pred HHHHHHHcCCHHHHHHHHHcC-----CCCccccCC-CCCHHHHhcchhHHHHHHHHhccch
Confidence 999999999999999999999 566667776 77777665 5566666666665
No 100
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.71 E-value=1.6e-17 Score=188.13 Aligned_cols=154 Identities=18% Similarity=0.212 Sum_probs=131.2
Q ss_pred hhhHHHHHHHHhhhHHHHHHHHHhCC---CCCCccCCCCCcHHHHHHHcC---ChhhhHHHHhCCCCCCc--------cC
Q 001972 581 SRDKLIQNLLRNRLCEWLVWKIHEGG---KGPNVIDDGGQGVVHLAAALG---YEWAMRPIIATGVSPNF--------RD 646 (988)
Q Consensus 581 ~~~~lL~~al~~~l~e~Lv~~Lle~G---ad~n~~D~~G~TpLH~AA~~G---~~~iV~~LL~~Gadvn~--------~D 646 (988)
...+.|+.|+..+.. .+++.|++.| ++++..|..|.||||+||..| +.+++++|++.|++++. .|
T Consensus 198 ~g~t~L~~A~~~g~~-~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d 276 (373)
T 2fo1_E 198 SERSALHQAAANRDF-GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEK 276 (373)
T ss_dssp TCCCHHHHHHHTTCH-HHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSS
T ss_pred CCCCHHHHHHHCCCH-HHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCccc
Confidence 345678888887744 4567788887 799999999999999999998 88999999999999986 67
Q ss_pred CCCCcHhhHHHhcCCHHHHHHHHHcC-CCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCc
Q 001972 647 ARGRTALHWASYFGREETVIMLVKLG-AAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENG 725 (988)
Q Consensus 647 ~~G~TpLH~Aa~~G~~eiV~~LL~~G-Ad~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~ 725 (988)
..|+||||+||..|+.++|++|++.| ++++..+ ..|.||||+|+..|+.+++++|+++| ++++..+..
T Consensus 277 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d------~~g~TpL~~A~~~g~~~iv~~Ll~~g-----ad~~~~d~~ 345 (373)
T 2fo1_E 277 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQD------EDGKTPIMLAAQEGRIEVVMYLIQQG-----ASVEAVDAT 345 (373)
T ss_dssp CCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCC------TTCCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCSS
T ss_pred ccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcC------CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCccCCCCC
Confidence 78999999999999999999999886 9998887 69999999999999999999999999 455555555
Q ss_pred chHHH----HHHhhHHHHHHHHHcCC
Q 001972 726 MDNVA----AALAAEKANETAAQIGV 747 (988)
Q Consensus 726 ~g~ta----a~~~~~~~v~~Lle~~a 747 (988)
|.+| +..++.++++.|++.++
T Consensus 346 -g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 346 -DHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp -SCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred -CCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 5554 45557899999988874
No 101
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.70 E-value=4.1e-17 Score=180.39 Aligned_cols=124 Identities=25% Similarity=0.292 Sum_probs=112.6
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhCCCCCCc------cCCCCCcHHHHHHHc---CChhhhHHHHhCCCCCCccCCCCCcHh
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEGGKGPNV------IDDGGQGVVHLAAAL---GYEWAMRPIIATGVSPNFRDARGRTAL 653 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~Gad~n~------~D~~G~TpLH~AA~~---G~~~iV~~LL~~Gadvn~~D~~G~TpL 653 (988)
.+.|+.++..+..+.+ ..|++.|++++. .|..|.||||+|+.. |+.++|++||..|+++|.+|..|+|||
T Consensus 152 ~~~L~~A~~~g~~~~v-~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSV-LEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp HHHHHHHHHTTCHHHH-HHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred HHHHhhhhhccCHHHH-HHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 3557777777766554 456799999998 689999999999997 899999999999999999999999999
Q ss_pred hHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccCC
Q 001972 654 HWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADLS 713 (988)
Q Consensus 654 H~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~ 713 (988)
|+|+..|+.++|++|+++|++++.+| ..|.||||+|+..|+.+++++|+++|++
T Consensus 231 h~A~~~g~~~~v~~Ll~~gad~~~~d------~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 231 HYAALYNQPDCLKLLLKGRALVGTVN------EAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCCSCCC------TTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcC------CCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 99999999999999999999999988 6999999999999999999999999954
No 102
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.70 E-value=2.9e-17 Score=178.59 Aligned_cols=145 Identities=19% Similarity=0.233 Sum_probs=122.4
Q ss_pred CCccCCCCCcHHHHHHHcCChhhhHHHHhCCC-CCCccCCCCCcHhhHHH-----hcCCHHHHHHHHHcCCCCCccCCCC
Q 001972 609 PNVIDDGGQGVVHLAAALGYEWAMRPIIATGV-SPNFRDARGRTALHWAS-----YFGREETVIMLVKLGAAPGAVEDPT 682 (988)
Q Consensus 609 ~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Ga-dvn~~D~~G~TpLH~Aa-----~~G~~eiV~~LL~~GAd~n~~dd~~ 682 (988)
+|..|..|+||||+||..|+.++|++|++.|+ +++..|..|+||||+|+ ..|+.+++++|++.|++++..+
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~--- 180 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS--- 180 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT---
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC---
Confidence 68899999999999999999999999999998 99999999999999999 6789999999999998887766
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHH----HHHhhHHHHHHHHH-cCC-CCCCCchhh
Q 001972 683 PAFPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVA----AALAAEKANETAAQ-IGV-QSDGPAAEQ 756 (988)
Q Consensus 683 ~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~ta----a~~~~~~~v~~Lle-~~a-~~~~~~~~~ 756 (988)
..|.||||+|+..|+.+++++|++.| ++++..+.. |.+| +..+..++++.|++ .++ ++..
T Consensus 181 ---~~g~tpLh~A~~~g~~~~v~~Ll~~g-----ad~n~~d~~-G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~----- 246 (276)
T 4hbd_A 181 ---QAGQTALMLAVSHGRVDVVKALLACE-----ADVNVQDDD-GSTALMCACEHGHKEIAGLLLAVPSCDISLT----- 246 (276)
T ss_dssp ---TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHTSTTCCTTCC-----
T ss_pred ---CCCCCHHHHHHHcCCHHHHHHHHhCC-----CCCCCCCCC-CCCHHHHHHHCCCHHHHHHHHhcCCCCCcCc-----
Confidence 68999999999999999999999999 455556655 6654 45567899999999 676 3322
Q ss_pred hhhhhhhHHHhhhhhH
Q 001972 757 LSLRGSLAAVRKSAHA 772 (988)
Q Consensus 757 lslkdsL~AvR~a~~A 772 (988)
...+.++++.|...
T Consensus 247 --d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 247 --DRDGSTALMVALDA 260 (276)
T ss_dssp --CTTSCCHHHHHHHH
T ss_pred --CCCCCCHHHHHHHc
Confidence 34556676665543
No 103
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.70 E-value=4.9e-17 Score=185.00 Aligned_cols=123 Identities=20% Similarity=0.221 Sum_probs=112.8
Q ss_pred hHHHHHHHHh-hhHHHHHHHHHhCCCCCCccC--CCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhc
Q 001972 583 DKLIQNLLRN-RLCEWLVWKIHEGGKGPNVID--DGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYF 659 (988)
Q Consensus 583 ~~lL~~al~~-~l~e~Lv~~Lle~Gad~n~~D--~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~ 659 (988)
.++|+.|+.. +.. .++..|++.|+++|..| ..|.||||+||..|+.++|++|+++|+++|.+|..|+||||+|+..
T Consensus 200 ~t~L~~Aa~~~g~~-~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 278 (368)
T 3jue_A 200 GALLFRASGHPPSL-PTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATIL 278 (368)
T ss_dssp HHHHHHHTSSSCCH-HHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred CcHHHHHHHccCCH-HHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc
Confidence 4667777776 544 45567889999999998 8999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHccC
Q 001972 660 GREETVIMLVKLGAAPGAVEDPTPAFPGGQTAADLASSRGHKGIAGYLAEADL 712 (988)
Q Consensus 660 G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPLhlAa~~G~~eiv~~Lle~Ga 712 (988)
|+.++|++|+++|++++..| ..|.||||+|+..|+.+++++|+..|.
T Consensus 279 g~~~~v~~LL~~Gad~~~~d------~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 279 GHTGLACLFLKRGADLGARD------SEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp TCHHHHHHHHHTTCCTTCCC------TTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHCcCCCCCcC------CCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 99999999999999999988 699999999999999999999999883
No 104
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.69 E-value=2.6e-17 Score=167.35 Aligned_cols=111 Identities=23% Similarity=0.235 Sum_probs=102.5
Q ss_pred CCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHH
Q 001972 613 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAA 692 (988)
Q Consensus 613 D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPL 692 (988)
+..|.||||+||..|+.++++.|++ |+++|.+|..|+||||+|+..|+.++|++|+++|++++..++ ..|.|||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~-----~~g~tpL 114 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM-----RGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCS-----SSSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCC-----CCCCCHH
Confidence 4578999999999999999999999 999999999999999999999999999999999999998874 6899999
Q ss_pred HHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhh
Q 001972 693 DLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA 735 (988)
Q Consensus 693 hlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~ 735 (988)
|+|+..|+.+++++|+++| ++++..+.. |.+|...+.
T Consensus 115 ~~A~~~~~~~~v~~Ll~~g-----a~~~~~d~~-g~tpl~~A~ 151 (183)
T 3deo_A 115 HMAAGYVRPEVVEALVELG-----ADIEVEDER-GLTALELAR 151 (183)
T ss_dssp HHHHHTTCHHHHHHHHHHT-----CCTTCCCTT-SCCHHHHHH
T ss_pred HHHHhcCcHHHHHHHHHcC-----CCCcCCCCC-CCCHHHHHH
Confidence 9999999999999999999 666777777 888888763
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.68 E-value=7.2e-17 Score=172.25 Aligned_cols=111 Identities=23% Similarity=0.235 Sum_probs=102.5
Q ss_pred CCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCCcHH
Q 001972 613 DDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQTAA 692 (988)
Q Consensus 613 D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPL 692 (988)
+..|.||||+||..|+.++|+.|+. |+++|.+|..|+||||+||..|+.++|++|+++|++++..++ ..|.|||
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~-----~~g~t~L 115 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDM-----RGGLTAL 115 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCS-----SSCCCHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCC-----CCCCCHH
Confidence 3468999999999999999999999 999999999999999999999999999999999999998874 6899999
Q ss_pred HHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHHhh
Q 001972 693 DLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAALAA 735 (988)
Q Consensus 693 hlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~~~ 735 (988)
|+|+..|+.+++++|+++| ++++..+.. |.+|...+.
T Consensus 116 ~~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~-g~t~l~~A~ 152 (244)
T 3ui2_A 116 HMAAGYVRPEVVEALVELG-----ADIEVEDER-GLTALELAR 152 (244)
T ss_dssp HHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-CCCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCC-----CCCCCCCCC-CCcHHHHHH
Confidence 9999999999999999999 667777777 888888774
No 106
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.65 E-value=2.1e-16 Score=147.56 Aligned_cols=92 Identities=28% Similarity=0.336 Sum_probs=85.6
Q ss_pred CccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCCC
Q 001972 610 NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGGQ 689 (988)
Q Consensus 610 n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G~ 689 (988)
...|.+|.||||+||..|+.+++++|++.|+++|.+|..|+||||+||..|+.+++++|+++|++++..+ ..|.
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d------~~g~ 91 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD------KFGK 91 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTSC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc------cCCC
Confidence 4468899999999999999999999999999999999999999999999999999999999999999887 6999
Q ss_pred cHHHHHHHcCcHHHHHHH
Q 001972 690 TAADLASSRGHKGIAGYL 707 (988)
Q Consensus 690 TPLhlAa~~G~~eiv~~L 707 (988)
||||+|+..|+.+++++|
T Consensus 92 tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 92 TAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CHHHHHHHHTCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHh
Confidence 999999999999999987
No 107
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.63 E-value=8.9e-16 Score=194.69 Aligned_cols=142 Identities=21% Similarity=0.208 Sum_probs=116.1
Q ss_pred hhHHHHHHHHHHhhhhhhhhhccCCCchhhHHHHHHHhhhhhhcccchh-hH-HHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 001972 770 AHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIH-FE-DYLHFAAIKIQQKYRGWKGRKDFLKIR 847 (988)
Q Consensus 770 ~~AA~rIQ~aFR~~s~R~r~L~~~~~d~~e~~~sIla~q~~~r~~~~~~-~~-~~~~~AAi~IQ~~~Rg~~~Rk~f~~~r 847 (988)
..++..||+.+|++..|+++ .....+++.+|..+|+..+++ +. .+...||+.||+.||||++||.|..+|
T Consensus 768 ~~aa~~IQa~~Rg~l~Rk~~--------~~~r~aai~IQ~~~Rg~~aR~~~~~lr~~~AAi~IQs~~Rg~~~Rk~y~~lr 839 (1080)
T 2dfs_A 768 RAACIRIQKTIRGWLMRKKY--------MRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMR 839 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh--------hhhHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHhhHHHHHHHHHHH
Confidence 45889999999999999998 445566666688888888776 32 257899999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccHHHHHHHHHHHHHHH
Q 001972 848 NHIVKLQAHVRGHQVRKQYKKVV--WSVSIVEKAILRWRRRGSGLRGFRVGNSTANVASENEKTDEYEFLRIGRKQKFAG 925 (988)
Q Consensus 848 ~~~v~IQa~~Rg~~aRk~y~~l~--~sv~~lqk~~~rwr~~r~~lr~~~~~~~~~~~~~~~~~~~~~~~L~~~rkq~e~~ 925 (988)
.+++.||++|||+++|++|+.+. .+++.+|+.+|.|..|+... +
T Consensus 840 ~aai~IQs~~Rg~laRr~~~~lr~~~aav~IQ~~~Rg~l~R~~y~----------------------------------~ 885 (1080)
T 2dfs_A 840 DATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYH----------------------------------R 885 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHTT----------------------------------T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------H
Confidence 99999999999999999998873 47788888888776555432 1
Q ss_pred HHHHHHHHHhhhhcHHHHHHHHHHHHHH
Q 001972 926 VEKALERVKSMVRNPEARDQYMRMVAKF 953 (988)
Q Consensus 926 ~~~a~~rVqs~~r~~~AR~qyrrl~~el 953 (988)
..+|++.||++||+..||++|++|+.+.
T Consensus 886 ~~~aai~iQs~~R~~laRr~~~~Lk~ea 913 (1080)
T 2dfs_A 886 TLKAIVYLQCCYRRMMAKRELKKLKIEA 913 (1080)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTTC----
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2378999999999999999999998654
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.59 E-value=3.8e-15 Score=134.22 Aligned_cols=91 Identities=31% Similarity=0.357 Sum_probs=83.7
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCCH
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGRE 662 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~ 662 (988)
.+.|+.++..+.. .+++.|++.|+++|.+|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 3 ~t~L~~A~~~~~~-~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 3 RTPLHLAARNGHL-EVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp CCHHHHHHHHTCH-HHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CcHHHHHHHcCCH-HHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 3567888887744 456788899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCC
Q 001972 663 ETVIMLVKLGAA 674 (988)
Q Consensus 663 eiV~~LL~~GAd 674 (988)
+++++|+++||+
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999999985
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.56 E-value=5.6e-15 Score=168.04 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=108.1
Q ss_pred cCCCCCcHHHHHHHc-CChhhhHHHHhCCCCCCccC--CCCCcHhhHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCCCC
Q 001972 612 IDDGGQGVVHLAAAL-GYEWAMRPIIATGVSPNFRD--ARGRTALHWASYFGREETVIMLVKLGAAPGAVEDPTPAFPGG 688 (988)
Q Consensus 612 ~D~~G~TpLH~AA~~-G~~~iV~~LL~~Gadvn~~D--~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~n~~dd~~~~d~~G 688 (988)
.+..+.|+||+|+.. |+.++|+.||+.|+++|..| ..|+||||+||..|+.++|++|+++|++++..+ ..|
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d------~~G 268 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQAD------SAG 268 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC------TTS
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCC------CCC
Confidence 344567899999999 99999999999999999998 889999999999999999999999999999887 699
Q ss_pred CcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHhhHHHHHHHHHcCC
Q 001972 689 QTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALAAEKANETAAQIGV 747 (988)
Q Consensus 689 ~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~~~~~v~~Lle~~a 747 (988)
.||||+|+..|+.+++++|+++| ++++..+.. |.+|+ ..++.+++++|+..+.
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~G-----ad~~~~d~~-G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRG-----ADLGARDSE-GRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCHHHHHHHcCcHHHHHHHHHCc-----CCCCCcCCC-CCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 99999999999999999999999 455555555 65555 4457889999987764
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.55 E-value=2.9e-15 Score=139.94 Aligned_cols=104 Identities=28% Similarity=0.287 Sum_probs=92.8
Q ss_pred hhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHhcCC
Q 001972 582 RDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASYFGR 661 (988)
Q Consensus 582 ~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~ 661 (988)
..+.|+.++..+..+ +++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 9 g~t~L~~A~~~~~~~-~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~~ 87 (115)
T 2l6b_A 9 GNTPLHNAAKNGHAE-EVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGH 87 (115)
T ss_dssp SCCHHHHHHHHTCHH-HHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTTC
T ss_pred CCCHHHHHHHcCCHH-HHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCCC
Confidence 456788888877544 5677899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCccCCCCCCCCCCCcHH
Q 001972 662 EETVIMLVKLGAAPGAVEDPTPAFPGGQTAA 692 (988)
Q Consensus 662 ~eiV~~LL~~GAd~n~~dd~~~~d~~G~TPL 692 (988)
.+++++|+++|++++..+ ..|.||-
T Consensus 88 ~~~~~~Ll~~ga~~n~~~------~~~~~~~ 112 (115)
T 2l6b_A 88 HEIVKLLDAKGADVNARS------WGSSHHH 112 (115)
T ss_dssp HHHHHHHHTTSSSHHHHS------CCCC---
T ss_pred HHHHHHHHHcCCCCCcCC------ccccccc
Confidence 999999999999999988 5788773
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.55 E-value=1.2e-14 Score=171.50 Aligned_cols=120 Identities=15% Similarity=0.070 Sum_probs=107.5
Q ss_pred CCcHHHHHHHcCChhhhHHHHhCCCCCCcc------CCCCCcHhhHHHh---cCCHHHHHHHHHcCCCCCccCCCCCCCC
Q 001972 616 GQGVVHLAAALGYEWAMRPIIATGVSPNFR------DARGRTALHWASY---FGREETVIMLVKLGAAPGAVEDPTPAFP 686 (988)
Q Consensus 616 G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~------D~~G~TpLH~Aa~---~G~~eiV~~LL~~GAd~n~~dd~~~~d~ 686 (988)
..+.||.|+..|+.++|+.||..|+++|.. |..|+||||+||. .|+.++|++|+++|+++|.+| .
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d------~ 205 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA------A 205 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCC------S
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccC------C
Confidence 347899999999999999999999999988 8899999999965 999999999999999999988 6
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHH----hhHHHHHHHHHcCC
Q 001972 687 GGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV 747 (988)
Q Consensus 687 ~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~----~~~~~v~~Lle~~a 747 (988)
.|.||||+|+..|+.+++++|+++| ++++..+.. |.+|+.. ++.++++.|++.++
T Consensus 206 ~g~TpLh~A~~~g~~~~v~~Ll~~g-----a~~~~~d~~-g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 206 DGNTALHYAALYNQPDCLKLLLKGR-----ALVGTVNEA-GETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp SSCCHHHHHTTTTCHHHHHHHHHTC-----CCCSCCCTT-CCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999999999999999999999999 556666665 6655544 46899999999998
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.53 E-value=2.6e-14 Score=157.90 Aligned_cols=122 Identities=15% Similarity=0.059 Sum_probs=106.6
Q ss_pred CCCCcHHHHHHHcCChhhhHHHHhCCCCCCc------cCCCCCcHhhHHHhc---CCHHHHHHHHHcCCCCCccCCCCCC
Q 001972 614 DGGQGVVHLAAALGYEWAMRPIIATGVSPNF------RDARGRTALHWASYF---GREETVIMLVKLGAAPGAVEDPTPA 684 (988)
Q Consensus 614 ~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~------~D~~G~TpLH~Aa~~---G~~eiV~~LL~~GAd~n~~dd~~~~ 684 (988)
..+.++||.|+..|+.+.|+.|+..|++++. .|..|+||||+|+.. |+.++|++|+++|++++..+
T Consensus 149 ~~~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d----- 223 (301)
T 2b0o_E 149 TPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA----- 223 (301)
T ss_dssp C-CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCC-----
T ss_pred CchHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCC-----
Confidence 3456789999999999999999999999998 699999999999997 89999999999999999887
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH----HHhhHHHHHHHHHcCC
Q 001972 685 FPGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA----ALAAEKANETAAQIGV 747 (988)
Q Consensus 685 d~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa----~~~~~~~v~~Lle~~a 747 (988)
..|.||||+|+..|+.+++++|++.| ++++..+.. |.+|+ ..+..+++++|++.++
T Consensus 224 -~~G~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~-G~TpL~~A~~~~~~~iv~~Ll~~ga 283 (301)
T 2b0o_E 224 -ADGNTALHYAALYNQPDCLKLLLKGR-----ALVGTVNEA-GETALDIARKKHHKECEELLEQAQA 283 (301)
T ss_dssp -TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCCSCCCTT-SCCHHHHHHHHTCHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHhcC
Confidence 69999999999999999999999999 555566655 66554 4556789999998874
No 113
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.53 E-value=2.8e-14 Score=155.83 Aligned_cols=121 Identities=17% Similarity=0.088 Sum_probs=106.6
Q ss_pred CCCcHHHHHHHcCChhhhHHHHhCCCCCC------ccCCCCCcHhhHHHhc---CCHHHHHHHHHcCCCCCccCCCCCCC
Q 001972 615 GGQGVVHLAAALGYEWAMRPIIATGVSPN------FRDARGRTALHWASYF---GREETVIMLVKLGAAPGAVEDPTPAF 685 (988)
Q Consensus 615 ~G~TpLH~AA~~G~~~iV~~LL~~Gadvn------~~D~~G~TpLH~Aa~~---G~~eiV~~LL~~GAd~n~~dd~~~~d 685 (988)
...++||.|+..|+...+..++..|++++ ..|..|+||||+||.. |+.++|++|+++|++++..|
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d------ 202 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQT------ 202 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCC------
T ss_pred hhhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccC------
Confidence 34579999999999999999999999954 4588999999999999 89999999999999999887
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHccCCCCCCCCccccCcchHHHHHH----hhHHHHHHHHHcCC
Q 001972 686 PGGQTAADLASSRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAAAL----AAEKANETAAQIGV 747 (988)
Q Consensus 686 ~~G~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa~~----~~~~~v~~Lle~~a 747 (988)
..|.||||+|+..|+.+++++|+++| ++++.++.. |.+|+.. ++.++++.|++.++
T Consensus 203 ~~g~TpLh~A~~~g~~~~v~~Ll~~g-----ad~~~~d~~-g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 203 GKGSTALHYCCLTDNAECLKLLLRGK-----ASIEIANES-GETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCccCC-CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 69999999999999999999999999 556666666 7666555 46899999999986
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.50 E-value=4.6e-16 Score=177.52 Aligned_cols=144 Identities=14% Similarity=0.078 Sum_probs=112.5
Q ss_pred hHHHHHHHHhhhHHHHHHHHHhCCCCC---CccCCCCCcHHHHHHHcCChhhhHHHHhCCCCC---CccCCCCCcHhhHH
Q 001972 583 DKLIQNLLRNRLCEWLVWKIHEGGKGP---NVIDDGGQGVVHLAAALGYEWAMRPIIATGVSP---NFRDARGRTALHWA 656 (988)
Q Consensus 583 ~~lL~~al~~~l~e~Lv~~Lle~Gad~---n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadv---n~~D~~G~TpLH~A 656 (988)
.+.|+.|+..+..+ +++.|++.|+.. +..|..|.||||+||..|+.++|++|+++|+++ +..+.+ +||||+|
T Consensus 93 ~T~Lh~Aa~~G~~e-~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~A 170 (376)
T 2aja_A 93 EVICFVAAITGCSS-ALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLA 170 (376)
T ss_dssp HHHHHHHHHHCCHH-HHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHH
T ss_pred CCHHHHHHHcCCHH-HHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHH
Confidence 48899999888554 567788888732 234556889999999999999999999999763 322333 8999999
Q ss_pred HhcCCHHHHHHHHHcCCCCCc--cCCCCCCCCCCCcHHHHHH-HcCcHHHHHHHHHccCCCCCCCCccccCcchHHHH--
Q 001972 657 SYFGREETVIMLVKLGAAPGA--VEDPTPAFPGGQTAADLAS-SRGHKGIAGYLAEADLSSHLSSLTVNENGMDNVAA-- 731 (988)
Q Consensus 657 a~~G~~eiV~~LL~~GAd~n~--~dd~~~~d~~G~TPLhlAa-~~G~~eiv~~Lle~Ga~~~~~~l~~~d~~~g~taa-- 731 (988)
|..|+.++|++|+++|++++. .+ ..|.||||+|+ ..|+.+++++|++.|+ . |.+|.
T Consensus 171 a~~G~~eiv~~Ll~~ga~~~~~~~d------~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------------~-~~taL~~ 231 (376)
T 2aja_A 171 AENGHLHVLNRLCELAPTEATAMIQ------AENYYAFRWAAVGRGHHNVINFLLDCPV------------M-LAYAEIH 231 (376)
T ss_dssp HHTTCHHHHHHHHHSCGGGHHHHHH------HHHHHHHHHHHSTTCCHHHHHHHTTSHH------------H-HHHHHHC
T ss_pred HHCCCHHHHHHHHHcCCccchhccC------CCCCCHHHHHHHHCCCHHHHHHHHhCCC------------c-cchHHHH
Confidence 999999999999999999876 66 58999999999 9999999999999772 1 44444
Q ss_pred --HHhhHHHHHHHHHcCC
Q 001972 732 --ALAAEKANETAAQIGV 747 (988)
Q Consensus 732 --~~~~~~~v~~Lle~~a 747 (988)
..++.+++++|++.++
T Consensus 232 Aa~~g~~evv~lL~~~ga 249 (376)
T 2aja_A 232 EFEYGEKYVNPFIARHVN 249 (376)
T ss_dssp TTTTTTTTHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHhcCc
Confidence 4556788888888775
No 115
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.40 E-value=5.1e-14 Score=160.58 Aligned_cols=119 Identities=17% Similarity=0.090 Sum_probs=94.4
Q ss_pred CCCcHHHHHHHcCChhhhHHHHhCCCCC---CccCCCCCcHhhHHHhcCCHHHHHHHHHcCCCC---CccCCCCCCCCCC
Q 001972 615 GGQGVVHLAAALGYEWAMRPIIATGVSP---NFRDARGRTALHWASYFGREETVIMLVKLGAAP---GAVEDPTPAFPGG 688 (988)
Q Consensus 615 ~G~TpLH~AA~~G~~~iV~~LL~~Gadv---n~~D~~G~TpLH~Aa~~G~~eiV~~LL~~GAd~---n~~dd~~~~d~~G 688 (988)
++.||||+||..|+.++|++|++.|+.. +..+..|.||||+||..|+.++|++|+++|+++ +..+ .+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~------~~- 163 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQA------EN- 163 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSH------HH-
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCC------CC-
Confidence 4469999999999999999999999832 234556899999999999999999999999874 3322 23
Q ss_pred CcHHHHHHHcCcHHHHHHHHHccCCCCCCCCcc--ccCcchHHHHHHh-----hHHHHHHHHHcC
Q 001972 689 QTAADLASSRGHKGIAGYLAEADLSSHLSSLTV--NENGMDNVAAALA-----AEKANETAAQIG 746 (988)
Q Consensus 689 ~TPLhlAa~~G~~eiv~~Lle~Ga~~~~~~l~~--~d~~~g~taa~~~-----~~~~v~~Lle~~ 746 (988)
.||||+|+..|+.+++++|+++| ++++. .+.. |.+|+..+ +.++|+.|++.+
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~g-----a~~~~~~~d~~-g~TpL~~Aa~~~G~~eiv~~Ll~~g 222 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELA-----PTEATAMIQAE-NYYAFRWAAVGRGHHNVINFLLDCP 222 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSC-----GGGHHHHHHHH-HHHHHHHHHSTTCCHHHHHHHTTSH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcC-----CccchhccCCC-CCCHHHHHHHHCCCHHHHHHHHhCC
Confidence 89999999999999999999999 55554 5555 77666554 489999998754
No 116
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.38 E-value=1.3e-12 Score=165.88 Aligned_cols=120 Identities=18% Similarity=0.250 Sum_probs=90.9
Q ss_pred hhHHHHHHHHHHhhhhhhhhhccCCCchhhHHHHHHHhhhhhhcccchhhHHHHHHHHHHHHHHHhhHHHHHHHHHHHH-
Q 001972 770 AHAAALIQQAFRVRSFRHRQSIQSSDDVSEVSVDLVALGSLNKVSKMIHFEDYLHFAAIKIQQKYRGWKGRKDFLKIRN- 848 (988)
Q Consensus 770 ~~AA~rIQ~aFR~~s~R~r~L~~~~~d~~e~~~sIla~q~~~r~~~~~~~~~~~~~AAi~IQ~~~Rg~~~Rk~f~~~r~- 848 (988)
..++..||+.+|++..|+++... ....+.+.+|..+|+..+++.-.....||+.||+.|||+++|+.|..+|+
T Consensus 791 r~aai~IQ~~~Rg~~aR~~~~~l------r~~~AAi~IQs~~Rg~~~Rk~y~~lr~aai~IQs~~Rg~laRr~~~~lr~~ 864 (1080)
T 2dfs_A 791 RRAAITIQRYVRGHQARCYATFL------RRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLRE 864 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccccc------ccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45788899999998888665211 11233334477778888877444566899999999999999999998874
Q ss_pred -HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q 001972 849 -HIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGSGLRGFRVG 896 (988)
Q Consensus 849 -~~v~IQa~~Rg~~aRk~y~~l~~sv~~lqk~~~rwr~~r~~lr~~~~~ 896 (988)
++++||++|||+++|+.|+...++++.+|..+|+|..+| .++.++.+
T Consensus 865 ~aav~IQ~~~Rg~l~R~~y~~~~~aai~iQs~~R~~laRr-~~~~Lk~e 912 (1080)
T 2dfs_A 865 HKSIIIQKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKR-ELKKLKIE 912 (1080)
T ss_dssp HHHHHHHHHHTTTHHHHHTTTTHHHHHHHHHHHHHHHHHH-HTTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 799999999999999999998999999999998887654 34444443
No 117
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.38 E-value=1.4e-12 Score=121.44 Aligned_cols=89 Identities=21% Similarity=0.220 Sum_probs=80.9
Q ss_pred chhhhHHHHHHHHhhhHHHHHHHHHhCCCCCCccCCCCCcHHHHHHHcCChhhhHHHHhCCCCCCccCCCCCcHhhHHHh
Q 001972 579 PNSRDKLIQNLLRNRLCEWLVWKIHEGGKGPNVIDDGGQGVVHLAAALGYEWAMRPIIATGVSPNFRDARGRTALHWASY 658 (988)
Q Consensus 579 ~~~~~~lL~~al~~~l~e~Lv~~Lle~Gad~n~~D~~G~TpLH~AA~~G~~~iV~~LL~~Gadvn~~D~~G~TpLH~Aa~ 658 (988)
+....+.|+.++..+..+ +++.|++.|+++|..|..|.||||+||..|+.+++++|+++|++++.+|..|+||||+|+.
T Consensus 21 ~~~g~t~L~~A~~~g~~~-~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 99 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDD-EVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISID 99 (110)
T ss_dssp -CCHHHHHHHHHHHTCHH-HHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCccchHHHHHHHcCCHH-HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHH
Confidence 455678899999887554 5577889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHH
Q 001972 659 FGREETVIML 668 (988)
Q Consensus 659 ~G~~eiV~~L 668 (988)
.|+.+++++|
T Consensus 100 ~~~~~~~~~L 109 (110)
T 2zgd_A 100 NGNEDLAEIL 109 (110)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHHHHHHh
Confidence 9999999987
No 118
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=99.14 E-value=8.1e-11 Score=98.12 Aligned_cols=48 Identities=38% Similarity=0.507 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 001972 822 YLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKV 869 (988)
Q Consensus 822 ~~~~AAi~IQ~~~Rg~~~Rk~f~~~r~~~v~IQa~~Rg~~aRk~y~~l 869 (988)
+++.||+.||+.||||++|+.|+.++.++|+||++|||+++|+.|..+
T Consensus 3 ~~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~~~~~ 50 (58)
T 2ix7_C 3 KLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFL 50 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999887
No 119
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=99.06 E-value=4.3e-10 Score=107.22 Aligned_cols=84 Identities=26% Similarity=0.433 Sum_probs=74.4
Q ss_pred eEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCCC-CCceeEEEEEeCCCc
Q 001972 410 FSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRL 487 (988)
Q Consensus 410 f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pph-~pG~V~l~Vt~~n~~ 487 (988)
+.|+.++|+.|+..||+.|+|.|. |+.+ +.|+||+..+-.++|.+..|+|++||+ .||.|.|.+...++.
T Consensus 6 P~I~~i~P~eG~~~GG~~V~I~G~nF~~G--------lqV~FG~t~~w~e~itphairv~~PP~~~pG~V~VTl~~k~kq 77 (138)
T 3muj_A 6 PCIKAISPSEGWTTGGATVIIIGDNFFDG--------LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQ 77 (138)
T ss_dssp CEEEEEESSEEETTCCCEEEEEEESCCTT--------CEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETTEE
T ss_pred CceeEecCCCCCccCCeEEEEeCCCcccC--------CEEEECCeeeeeeeecccceEEECCCCCCCCceEEEEeecCcc
Confidence 479999999999999999999999 5544 889999999999999999999999996 999999999988877
Q ss_pred cccc-ceeeeeecCC
Q 001972 488 ACSE-VREFEYREKP 501 (988)
Q Consensus 488 ~~Se-v~~FeYr~~~ 501 (988)
.|.. ...|.|..-+
T Consensus 78 f~~g~p~~F~Y~~l~ 92 (138)
T 3muj_A 78 FCKGAPGRFVYTALN 92 (138)
T ss_dssp ECTTSCEEEEEECCC
T ss_pred cccCCCceEEEecCC
Confidence 7754 4789998653
No 120
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=98.93 E-value=1.7e-09 Score=86.58 Aligned_cols=43 Identities=26% Similarity=0.270 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH--HHHHHHHHHHhHHHHHHH
Q 001972 824 HFAAIKIQQKYRGWKGRKDFLKIRN--HIVKLQAHVRGHQVRKQY 866 (988)
Q Consensus 824 ~~AAi~IQ~~~Rg~~~Rk~f~~~r~--~~v~IQa~~Rg~~aRk~y 866 (988)
..||+.||+.+|||++|+.|..+++ ++++||++|||+.+|+.|
T Consensus 3 r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 3 SQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 4689999999999999999999998 999999999999999987
No 121
>3mlp_A Transcription factor COE1; transcription factor, pseudo-IG-fold, TIG-domain, IPT-domain loop-helix; HET: DNA CIT; 2.80A {Mus musculus} PDB: 3n50_A
Probab=98.75 E-value=2.9e-08 Score=107.07 Aligned_cols=90 Identities=24% Similarity=0.386 Sum_probs=76.0
Q ss_pred CceEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCCC-CCceeEEEEEeCC
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSN 485 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pph-~pG~V~l~Vt~~n 485 (988)
..+.|+-++|+.|+..||+.|+|.|. |+.+ +.|+||...+-.++|++..|||++||+ .||.|.|.+...+
T Consensus 230 ~tP~IkaIsPnEG~~tGG~tV~IiGenFf~G--------LQVvFGtt~vWselITphAIRV~tPPr~~PGvVdVTLs~ks 301 (402)
T 3mlp_A 230 ATPCIKAISPSEGWTTGGATVIIIGDNFFDG--------LQVIFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKS 301 (402)
T ss_dssp SCCEEEECSSCEECTTCCCEEEEEEECCCTT--------CEEEETTEEECEEEEETTEEEEECCCCSSCEEEEEEEEETT
T ss_pred CCcceEEecCCCCCccCCeEEEEeCCCcccC--------CEEEEccEeeeeEEecccceEEECCCCCCCCceEEEEEecC
Confidence 35699999999999999999999999 5544 889999999999999999999999997 9999999999888
Q ss_pred Ccccc-cceeeeeecCCCCCC
Q 001972 486 RLACS-EVREFEYREKPSKAG 505 (988)
Q Consensus 486 ~~~~S-ev~~FeYr~~~~~~~ 505 (988)
...|- ....|.|.....+.+
T Consensus 302 Kqf~kg~pgrF~YtALnePtI 322 (402)
T 3mlp_A 302 KQFCKGTPGRFIYTALNEPTI 322 (402)
T ss_dssp EEESTTSCEEEEEC---CCTT
T ss_pred cccccCCCCceeeecCCCCcc
Confidence 77773 456899987654444
No 122
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=98.75 E-value=3.9e-08 Score=127.20 Aligned_cols=97 Identities=19% Similarity=0.229 Sum_probs=70.4
Q ss_pred hhhhhHHHHHHHHHHhhhhhhhhhccCC-----CchhhHHHHHHHhhhhh--hcccchh---h-------------HHHH
Q 001972 767 RKSAHAAALIQQAFRVRSFRHRQSIQSS-----DDVSEVSVDLVALGSLN--KVSKMIH---F-------------EDYL 823 (988)
Q Consensus 767 R~a~~AA~rIQ~aFR~~s~R~r~L~~~~-----~d~~e~~~sIla~q~~~--r~~~~~~---~-------------~~~~ 823 (988)
+.+++|.+..+..|. .||+.|.... .+.++.|..|+.. .-+ .....++ | ..++
T Consensus 716 ~r~Gfp~R~~~~~F~---~ry~~L~~~~~~~~~~d~k~~~~~lL~~-l~l~~~~~~iG~TKVF~r~g~l~~LE~~r~~~l 791 (1184)
T 1i84_S 716 CRQGFPNRIVFQEFR---QRYEILAANAIPKGFMDGKQACILMIKA-LELDPNLYRIGQSKIFFRTGVLAHLEEERDLKI 791 (1184)
T ss_dssp HHHSCCEEEEHHHHH---HHTTTTCTTTSCSSCCCHHHHHHHHHHT-TTCCTTTCCBCSSEEEECTTHHHHHHHHHHHHT
T ss_pred HhhcCcccccHHHHH---HHHHHhccccCCcCCCCHHHHHHHHHHH-cCCCccceeEcCeEEEEechHHHHHHHHHHHHH
Confidence 678999999999998 7898876432 1335677777752 110 0011111 1 2245
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHH---HHHHHHHHHHHhHHHHHHHH
Q 001972 824 HFAAIKIQQKYRGWKGRKDFLKIR---NHIVKLQAHVRGHQVRKQYK 867 (988)
Q Consensus 824 ~~AAi~IQ~~~Rg~~~Rk~f~~~r---~~~v~IQa~~Rg~~aRk~y~ 867 (988)
..+|+.||+.+|||++|+.|.++| .++++||+.||+|.+||.|.
T Consensus 792 ~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~~~ 838 (1184)
T 1i84_S 792 TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWP 838 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 689999999999999999999875 68899999999999998763
No 123
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=98.26 E-value=3e-06 Score=78.21 Aligned_cols=84 Identities=25% Similarity=0.219 Sum_probs=62.3
Q ss_pred ceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCc-eEEeeCCc-ccc-eEEEecCeEEEecCCCC--CceeEEEEEe
Q 001972 409 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTK-WGCMFGEI-EVP-AEVLTDNVIRCQAPSHA--AGRVPFYITG 483 (988)
Q Consensus 409 ~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~-~~c~FGd~-~Vp-ae~~~~gvLrC~~Pph~--pG~V~l~Vt~ 483 (988)
.+.|++|+|..|+. ||+|+|.|.+|... .+. ..|.+|++ +.+ ++..+...|.|.++|+. .|.|.|+|.
T Consensus 7 ~P~It~i~P~~Gp~--GT~vTI~G~nlg~~----~sdv~~V~vgg~~C~~~~~~~s~~~IvC~~~~~~~~~g~V~V~v~- 79 (99)
T 1uad_C 7 PPLVTGISPNEGIP--WTKVTIRGENLGTG----PTDLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTK- 79 (99)
T ss_dssp CCEEEEEESSEEST--TCEEEEEEECSCSS----GGGEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEET-
T ss_pred CCEEEEEECCCcCC--CCEEEEEEEeCCCC----cccceEEEECCEEceEeeceeecCEEEEEeCCCCCcceeEEEEEC-
Confidence 45899999999988 79999999977542 223 46999999 444 47889999999999984 566666663
Q ss_pred CCCcccccceeeeeecC
Q 001972 484 SNRLACSEVREFEYREK 500 (988)
Q Consensus 484 ~n~~~~Sev~~FeYr~~ 500 (988)
+++..-|.. .|+|.++
T Consensus 80 ~~~~~~s~~-~F~y~~P 95 (99)
T 1uad_C 80 SGGRGTSTV-SFKLLKP 95 (99)
T ss_dssp TTEECEESS-CCEECCC
T ss_pred CCCcEEecc-eEEEeCc
Confidence 222343443 8999865
No 124
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=98.21 E-value=9.7e-07 Score=109.27 Aligned_cols=98 Identities=20% Similarity=0.220 Sum_probs=73.1
Q ss_pred hhhhhHHHHHHHHHHhhhhhhhhhccCC-----CchhhHHHHHHHhhhhhh--cccchh---h-------------HHHH
Q 001972 767 RKSAHAAALIQQAFRVRSFRHRQSIQSS-----DDVSEVSVDLVALGSLNK--VSKMIH---F-------------EDYL 823 (988)
Q Consensus 767 R~a~~AA~rIQ~aFR~~s~R~r~L~~~~-----~d~~e~~~sIla~q~~~r--~~~~~~---~-------------~~~~ 823 (988)
+.++++.+..+..|. .||+.|.... .+.++.|..|+.. +-+. ..+.+. | +.++
T Consensus 703 ~r~Gfp~R~~f~eF~---~RY~~L~~~~~~~~~~d~k~~~~~ll~~-~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l 778 (837)
T 1kk8_A 703 CRKGFPSRLIYSEFK---QRYSILAPNAIPQGFVDGKTVSEKILAG-LQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERL 778 (837)
T ss_dssp -CCCSCEEEEHHHHH---HHHGGGSGGGCCC---CHHHHHHHHHHH-HTCCGGGEEECSSEEEECTTHHHHHHHHHHHHH
T ss_pred HHHhccccccHHHHH---HHHHHhcccccccCCCCHHHHHHHHHHH-cCCCccceeecCEEEEehhhHHHHHHHHHHHHH
Confidence 678999999999999 8999886431 2446778888753 1100 001111 1 3357
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHHHH
Q 001972 824 HFAAIKIQQKYRGWKGRKDFLKI---RNHIVKLQAHVRGHQVRKQYKK 868 (988)
Q Consensus 824 ~~AAi~IQ~~~Rg~~~Rk~f~~~---r~~~v~IQa~~Rg~~aRk~y~~ 868 (988)
..+|+.||+.+|||++||+|+++ |.++++||+.||||++||+|.-
T Consensus 779 ~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~~~w 826 (837)
T 1kk8_A 779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQW 826 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcchHH
Confidence 78999999999999999999998 6789999999999999998744
No 125
>1n2d_C IQ2 and IQ3 motifs from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle; 2.00A {Saccharomyces cerevisiae}
Probab=97.99 E-value=1e-05 Score=64.34 Aligned_cols=44 Identities=18% Similarity=0.264 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhh
Q 001972 846 IRNHIVKLQAHVRGHQVRKQYKKVVW--SVSIVEKAILRWRRRGSG 889 (988)
Q Consensus 846 ~r~~~v~IQa~~Rg~~aRk~y~~l~~--sv~~lqk~~~rwr~~r~~ 889 (988)
+|+++|.||++|||+++|+.|..+.+ +++++|+..+.|..++..
T Consensus 2 ~r~a~i~iQ~~~Rg~l~R~~~~~~~~~~aai~IQ~~~Rg~~~Rk~y 47 (48)
T 1n2d_C 2 ISQAIKYLQNNIKGFIIRQRVNDEMKVNCATLLQAAYRGHSIRANV 47 (48)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 46799999999999999999998866 999999999998877653
No 126
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus}
Probab=97.84 E-value=3.6e-05 Score=63.79 Aligned_cols=43 Identities=21% Similarity=0.394 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001972 846 IRNHIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILRWRRRGS 888 (988)
Q Consensus 846 ~r~~~v~IQa~~Rg~~aRk~y~~l~~sv~~lqk~~~rwr~~r~ 888 (988)
+..++|+||++|||+++|+.|..+.++++.+|+.++.|..++.
T Consensus 4 ~~~aai~IQ~~~Rg~~~Rk~~~~~r~aai~IQ~~~Rg~~aR~~ 46 (58)
T 2ix7_C 4 LRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCY 46 (58)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999998876554
No 127
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.83 E-value=3.6e-05 Score=88.87 Aligned_cols=86 Identities=21% Similarity=0.317 Sum_probs=70.8
Q ss_pred CceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCCCCC-ceeEEEEEeCCC
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSNR 486 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pph~p-G~V~l~Vt~~n~ 486 (988)
+...|++|+|..|. .||+|+|.|++|.+. .+...|+||+.+....-+++..|.|.+|++.+ |.++|.|...+.
T Consensus 16 ~p~~i~~~~P~~g~--~~~~~~i~G~nfg~~----~~~~~v~~~~~~~~v~~~~~~~i~~~vp~~~~~g~~~v~~~~~~~ 89 (430)
T 3tc9_A 16 KPVVISEFSPKEGG--LGTRMLLYGENFGSD----ISKIKVTIGGQDSKVVGAKGKSLYCVVPAKAYDGDIKLSILNDEG 89 (430)
T ss_dssp SCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEEECTTS
T ss_pred CCCEEEEEcCCCCC--CCCEEEEEEEcCCCC----ccceEEEECCEEEEEEEECCCEEEEEeCCCCCCccEEEEEecCCc
Confidence 44589999999999 799999999977552 56789999999777777999999999999988 999999987663
Q ss_pred c----ccccceeeeeecC
Q 001972 487 L----ACSEVREFEYREK 500 (988)
Q Consensus 487 ~----~~Sev~~FeYr~~ 500 (988)
. ..+ -..|+|...
T Consensus 90 ~~~~~~~~-~~~F~y~~~ 106 (430)
T 3tc9_A 90 EEIANTEA-NEKFVYQKK 106 (430)
T ss_dssp CEEEEEEC-SSCCEECCC
T ss_pred ceeeEEEE-eeEEEEEEE
Confidence 3 222 358988754
No 128
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=97.68 E-value=0.00024 Score=92.09 Aligned_cols=45 Identities=27% Similarity=0.361 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Q 001972 844 LKIRNHIVKLQAHVRGHQVRKQYKKV---VWSVSIVEKAILRWRRRGS 888 (988)
Q Consensus 844 ~~~r~~~v~IQa~~Rg~~aRk~y~~l---~~sv~~lqk~~~rwr~~r~ 888 (988)
..+...++.||+.|||+++|++|+++ ..++.++|+.+++|..+|.
T Consensus 789 ~~l~~~~~~iQ~~~Rg~l~R~~~~k~~~~~~a~~~iQ~~~r~~~~~k~ 836 (1184)
T 1i84_S 789 LKITDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXH 836 (1184)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34456789999999999999999887 4688889999999987753
No 129
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.60 E-value=0.00013 Score=83.58 Aligned_cols=86 Identities=20% Similarity=0.315 Sum_probs=69.8
Q ss_pred CceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCceEEeeCC----cccceEEEecCeEEEecCCCCCceeEEEEEe
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE----IEVPAEVLTDNVIRCQAPSHAAGRVPFYITG 483 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd----~~Vpae~~~~gvLrC~~Pph~pG~V~l~Vt~ 483 (988)
|...|++|+|..|. .||+|+|.|+.|.+. .+...|+||+ .+...--+.+..|.|++|.+.+|.+++.|.-
T Consensus 16 ~~~~~~~~~p~~g~--~~~~~~i~g~nfg~~----~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~vp~~~~g~~~i~v~~ 89 (409)
T 3hrp_A 16 QPVTVESFMPVEGK--LREKVIVKGSNFGTD----KSKVKVYFVDEAAERLSTVIGIDNNTLYCLAPRQLPGGNRIKVIV 89 (409)
T ss_dssp SCCEEEEEECSEEC--TTCEEEEEEECCCSC----GGGEEEEEECSSCEEEEEEEEEETTEEEEECCSCCSEEEEEEEEE
T ss_pred CCcEEEEEcCCCCC--CCcEEEEEeEcCCCC----ccceEEEECCcccceEEEEEEECCCEEEEEECCCCCCcEEEEEEE
Confidence 44589999999988 799999999977652 5788999999 6666656889999999999999999999997
Q ss_pred CCCcccccceeeeeecC
Q 001972 484 SNRLACSEVREFEYREK 500 (988)
Q Consensus 484 ~n~~~~Sev~~FeYr~~ 500 (988)
.+..+.++ ..|.|...
T Consensus 90 ~~~~~~~~-~~F~y~~~ 105 (409)
T 3hrp_A 90 DGKEVTTD-GTFKYEQA 105 (409)
T ss_dssp TTEEEECS-SCEEECCC
T ss_pred CCeeEEEe-eeEEEecc
Confidence 77654333 47888654
No 130
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=97.58 E-value=0.00013 Score=61.70 Aligned_cols=46 Identities=24% Similarity=0.328 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHH
Q 001972 821 DYLHFAAIKIQQKYRGWKGRKDFLKI---RNHIVKLQAHVRGHQVRKQY 866 (988)
Q Consensus 821 ~~~~~AAi~IQ~~~Rg~~~Rk~f~~~---r~~~v~IQa~~Rg~~aRk~y 866 (988)
+++...++.||+..|||++|++|.++ +.++..||..+|++.+++..
T Consensus 3 ~~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~~w 51 (64)
T 1wdc_A 3 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 51 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 45678899999999999999999998 77788999999999998765
No 131
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.53 E-value=0.00011 Score=86.27 Aligned_cols=86 Identities=23% Similarity=0.350 Sum_probs=68.2
Q ss_pred CceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCCCCC-ceeEEEEEeCCC
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSNR 486 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pph~p-G~V~l~Vt~~n~ 486 (988)
|-..|++|+|..|.. ||+|+|.|+.|.+. .+...|+||+.+....-+.+..|.|.+|.|.. |.++|.|.....
T Consensus 16 ~p~~i~~~~P~~G~~--~t~~~I~G~nFg~d----~~~i~V~~~~~~a~v~~~~~~~i~~~vp~~~~~G~~~v~v~~~~~ 89 (496)
T 3kya_A 16 KPVAISDFTPKEGGA--YQKLLIYGENFGTD----VSKVKVKIGGKDAIVINVKSTYVYCFVPSGAFSGEIEITVGEGEN 89 (496)
T ss_dssp SCCEEEEEECSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEECEEEECSSEEEEECCTTCTTCCEEEEESCGGG
T ss_pred CCcEEEEEcCCCCCC--CCEEEEEeecCCCC----cceeEEEECCEEEEEEEECCCEEEEEECCCCCCCcEEEEEEecCC
Confidence 445899999999998 79999999977553 57899999997666666789999999999966 999999875443
Q ss_pred --cccccceeeeeecC
Q 001972 487 --LACSEVREFEYREK 500 (988)
Q Consensus 487 --~~~Sev~~FeYr~~ 500 (988)
.+.++ ..|+|...
T Consensus 90 ~~~~~~~-~~F~Y~~~ 104 (496)
T 3kya_A 90 AVTTTAS-TTFSYEKK 104 (496)
T ss_dssp CEEEECS-SCCEECCC
T ss_pred ceEEEec-ceEEEEEE
Confidence 23333 68999643
No 132
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.50 E-value=8.4e-05 Score=91.32 Aligned_cols=92 Identities=20% Similarity=0.199 Sum_probs=60.1
Q ss_pred ceEEEeecCCCccCCCceEEEEEcccCCCCCC--CCCCceEEeeCCcccce--EEEecCeEEEecCCCCCceeEEEEEeC
Q 001972 409 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKL--SSDTKWGCMFGEIEVPA--EVLTDNVIRCQAPSHAAGRVPFYITGS 484 (988)
Q Consensus 409 ~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~--~~~~~~~c~FGd~~Vpa--e~~~~gvLrC~~Pph~pG~V~l~Vt~~ 484 (988)
.+.|+.|+|..|+..|||.|+|+|.+|..... .......|.||+.+... ..+.++.|.|.+||..+|.+++.|+..
T Consensus 541 ~P~ItsI~P~~Gp~~GGT~vTI~G~nf~~~~~~~~~~~~~~V~igg~~C~~~~~~~s~t~I~C~tp~~~~~~~~v~V~v~ 620 (727)
T 2uzx_B 541 LPAIYKVFPNSAPLEGGTRLTICGWDFGFRRNNKFDLKKTRVLLGNESCTLTLSESTMNTLKCTVGPAMNKHFNMSIIIS 620 (727)
T ss_dssp CCEEEEEESSBCCSSCCCEEEEEEECCCEEETTEEESTTCEEEETTEECEECGGGCCSSEEEEECCC-----CCCEEEEE
T ss_pred CCEEeccCCCcccCCCCEEEEEEEecCCCCcccccCCcccEEEECCCccceeeeeccCCEEEEEeCCCCCCCccEEEEEe
Confidence 57999999999999999999999997743100 01245789999983322 245788999999998655444444433
Q ss_pred CCcccccceeeeeecC
Q 001972 485 NRLACSEVREFEYREK 500 (988)
Q Consensus 485 n~~~~Sev~~FeYr~~ 500 (988)
++...+....|+|.++
T Consensus 621 ~~~~~~~~~~FtY~~P 636 (727)
T 2uzx_B 621 NGHGTTQYSTFSYVDP 636 (727)
T ss_dssp CSSCEEEEECCBCCCC
T ss_pred CCcceecccccccccc
Confidence 3322234467999743
No 133
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=97.46 E-value=0.00015 Score=61.10 Aligned_cols=45 Identities=22% Similarity=0.278 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHH---HHHHHHHHHHHHhHHHHHHH
Q 001972 822 YLHFAAIKIQQKYRGWKGRKDFLKI---RNHIVKLQAHVRGHQVRKQY 866 (988)
Q Consensus 822 ~~~~AAi~IQ~~~Rg~~~Rk~f~~~---r~~~v~IQa~~Rg~~aRk~y 866 (988)
++...++.||+..|||++|+.|.++ +.++..||..+|++.+++..
T Consensus 2 ~l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr~w 49 (63)
T 2bl0_A 2 RIGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFKNW 49 (63)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3456889999999999999999998 77788999999999998754
No 134
>2uzx_B Hepatocyte growth factor receptor; signaling protein/receptor, leucine rich repeat, receptor ectodomain, signaling protein, ATP-binding; 2.8A {Homo sapiens} PDB: 2uzy_B 1shy_B 1ssl_A
Probab=97.35 E-value=2.9e-05 Score=95.46 Aligned_cols=75 Identities=12% Similarity=0.212 Sum_probs=1.2
Q ss_pred ceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCCC-CCceeEEEEEeCCCc
Q 001972 409 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSH-AAGRVPFYITGSNRL 487 (988)
Q Consensus 409 ~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pph-~pG~V~l~Vt~~n~~ 487 (988)
.+.|+.|+|.+|+..|||.|+|+|..|.. .....|.||+.+.....++++.|.|.+||+ .+|.|+|.|+.++..
T Consensus 635 ~P~I~sisP~~G~~sGGt~ITI~G~nf~~-----~~~~~V~ig~~~C~i~~~s~t~I~C~tP~~~~~g~~~V~V~idg~~ 709 (727)
T 2uzx_B 635 DPVITSISPKYGPMAGGTLLTLTGNYLNS-----GNSRHISIGGKTCTLKSVSNSILECYTPAQTISTEFAVKLKIDLAN 709 (727)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred cceeEEECCCccccCCCEEEEEEEECCCC-----CCceEEEECCEEeeEEeecCCEEEEEcCCCCCCceEEEEEEECCEE
Confidence 56899999999999999999999997754 235789999986666778999999999998 689999999977655
Q ss_pred c
Q 001972 488 A 488 (988)
Q Consensus 488 ~ 488 (988)
.
T Consensus 710 ~ 710 (727)
T 2uzx_B 710 R 710 (727)
T ss_dssp -
T ss_pred e
Confidence 3
No 135
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=97.23 E-value=0.00029 Score=89.16 Aligned_cols=96 Identities=8% Similarity=-0.039 Sum_probs=69.1
Q ss_pred hhhhhHHHHHHHHHHhhhhhhhhhccCC---CchhhHHHHHHHhhhhhh--cccchh---h---------HH----HHHH
Q 001972 767 RKSAHAAALIQQAFRVRSFRHRQSIQSS---DDVSEVSVDLVALGSLNK--VSKMIH---F---------ED----YLHF 825 (988)
Q Consensus 767 R~a~~AA~rIQ~aFR~~s~R~r~L~~~~---~d~~e~~~sIla~q~~~r--~~~~~~---~---------~~----~~~~ 825 (988)
+.++++.+..+..|+ .||+.|.... .+.++.|..|+.. +-+. ..+-+. | ++ .+..
T Consensus 701 ~r~Gyp~R~~f~eF~---~RY~~L~~~~~~~~d~k~~~~~iL~~-l~l~~~~y~iG~TKVFlr~~~~~~LE~~r~~~~~~ 776 (1052)
T 4anj_A 701 MQGGFPSRASFHELY---NMYKKYMPDKLARLDPRLFCKALFKA-LGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDH 776 (1052)
T ss_dssp TTTCCCEEEEHHHHH---HHHHTTSCSSGGGSCHHHHHHHHHHH-TSCCGGGEEECSSEEEECTTCHHHHHHHHCCCHHH
T ss_pred HhcCCCCcCcHHHHH---HHHHHhCcccccCCCHHHHHHHHHHH-cCcCcccEEecCCEEeeCcCHHHHHHHHHHHHHHH
Confidence 779999999999999 8999987532 3346778888753 1100 001111 1 11 3567
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 001972 826 AAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYK 867 (988)
Q Consensus 826 AAi~IQ~~~Rg~~~Rk~f~~~r~~~v~IQa~~Rg~~aRk~y~ 867 (988)
+|+.||+ +|||++||+|+++|++++.||..+|+++.|+.+.
T Consensus 777 ~~~~iq~-~r~~l~r~~~~k~~~~a~~i~~~~r~~~~r~~~~ 817 (1052)
T 4anj_A 777 LAELVKR-VNHWLICSRWKKVQWCSLSVIKLKNKIKYRAEAV 817 (1052)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 7877775 7999999999999999999999999987776553
No 136
>2yrp_A Nuclear factor of activated T-cells, cytoplasmic 4; beta-sandwich, immunoglobulin-like fold, TIG domain, IPT domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.23 E-value=0.00094 Score=62.49 Aligned_cols=86 Identities=19% Similarity=0.268 Sum_probs=64.5
Q ss_pred cccCceEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc--------ccc----eEEEecCeEEEecCC
Q 001972 405 SQEQLFSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI--------EVP----AEVLTDNVIRCQAPS 471 (988)
Q Consensus 405 ~~~q~f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~--------~Vp----ae~~~~gvLrC~~Pp 471 (988)
|..-++.|.+.|-.-++..||-+|.|+|. |+.+ ..|.|=+. +.- .++....-|+|.+||
T Consensus 4 ~a~~~P~I~k~s~~s~~v~GG~Ev~Ll~~k~~kd--------~kV~F~E~~~dG~~~WE~~a~f~~d~~~q~aivf~tPp 75 (114)
T 2yrp_A 4 GSSGLPQVEAYSPSACSVRGGEELVLTGSNFLPD--------SKVVFIERGPDGKLQWEEEATVNRLQSNEVTLTLTVPE 75 (114)
T ss_dssp CCCSCCEEEEEESSCEETTCCSEEEEEEESCCTT--------CEEEEECBCTTSCBCCCCBCCBCTTTCBTTEEEEECCC
T ss_pred CCCCCCEEEEecCcccccCCCCEEEEEecccCCC--------CEEEEEEECCCCCcceEEeeEEChHHcccccEEEecCC
Confidence 34567899999999999999999999999 5422 34555221 222 345677899999999
Q ss_pred -C-----CCceeEEEEEeCCCcccccceeeeeec
Q 001972 472 -H-----AAGRVPFYITGSNRLACSEVREFEYRE 499 (988)
Q Consensus 472 -h-----~pG~V~l~Vt~~n~~~~Sev~~FeYr~ 499 (988)
| .|=.|.||| +++...+|+...|+|..
T Consensus 76 Y~~~~I~~pV~V~~~l-~~~~rk~Se~~~FtY~P 108 (114)
T 2yrp_A 76 YSNKRVSRPVQVYFYV-SNGRRKRSPTQSFRFLP 108 (114)
T ss_dssp CSCCSCSSCEEEEEEE-ECSSSCBCCCEEEEEEC
T ss_pred CCCCccCCCeEEEEEE-CCCCCcccCCcCcEEec
Confidence 2 566777777 45556689999999986
No 137
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.21 E-value=0.00072 Score=78.10 Aligned_cols=86 Identities=20% Similarity=0.349 Sum_probs=68.1
Q ss_pred CceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCCCCC-ceeEEEEEeCCC
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAA-GRVPFYITGSNR 486 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pph~p-G~V~l~Vt~~n~ 486 (988)
+-..|++|+|.+|.. ||||+|.|.+|.+. .+...|+||+.+....-+++..|.|.+|+... |.|.|.|..++.
T Consensus 18 ~p~~i~~~~P~~g~~--~~~~~i~G~nfg~~----~~~~~v~~~~~~a~v~~~~~~~i~~~vp~~~~~g~~~v~v~~~~~ 91 (433)
T 4hw6_A 18 EEIVVEKFLPTEGRK--GTRVVVYGRNFGND----VSKVKVTIGGYPAKVINVKGESLLCICPSKAYEGDVKVSVVGDDE 91 (433)
T ss_dssp SCCEEEEEESSEECT--TCEEEEEEECCCSC----GGGEEEEETTEEEEEEEECSSEEEEECCTTCTTCCEEEEEECTTS
T ss_pred CCCEEEEECCCCCCC--CCEEEEEeECCCCC----cceeEEEECCEEEEEEEeCCCEEEEEeCCCCCCCCEEEEEecCCc
Confidence 334899999999987 99999999977552 56899999998776666888899999999855 999999886664
Q ss_pred c----ccccceeeeeecC
Q 001972 487 L----ACSEVREFEYREK 500 (988)
Q Consensus 487 ~----~~Sev~~FeYr~~ 500 (988)
. ..+ -..|+|...
T Consensus 92 ~~~~~~~~-~~~F~y~~~ 108 (433)
T 4hw6_A 92 AELKSGVC-EAKFDYQYN 108 (433)
T ss_dssp CEEEEEEC-SSCCEECCC
T ss_pred ceeeEEEe-eeEEEEEee
Confidence 2 211 257888654
No 138
>1wdc_A Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} PDB: 3jvt_A 3jtd_A 3pn7_A 3ts5_A 3tuy_A* 1scm_A
Probab=96.59 E-value=0.0054 Score=51.66 Aligned_cols=42 Identities=33% Similarity=0.600 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 001972 846 IRNHIVKLQAHVRGHQVRKQYKKV---VWSVSIVEKAILRWRRRG 887 (988)
Q Consensus 846 ~r~~~v~IQa~~Rg~~aRk~y~~l---~~sv~~lqk~~~rwr~~r 887 (988)
+...++.|||.+||+++|+.|+++ ..|+.++|+.++.|...+
T Consensus 5 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~l~ 49 (64)
T 1wdc_A 5 LSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLR 49 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456789999999999999999999 778888999998887654
No 139
>2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=96.55 E-value=0.0043 Score=52.13 Aligned_cols=42 Identities=24% Similarity=0.318 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 001972 846 IRNHIVKLQAHVRGHQVRKQYKKV---VWSVSIVEKAILRWRRRG 887 (988)
Q Consensus 846 ~r~~~v~IQa~~Rg~~aRk~y~~l---~~sv~~lqk~~~rwr~~r 887 (988)
+...++.|||.+||+++|+.|+++ ..|+.++|+.++.|...+
T Consensus 3 l~~i~t~~Qa~~RG~l~R~~~~k~~~~~~A~~iIQrn~R~~~~lr 47 (63)
T 2bl0_A 3 IGEIVKVVQAAARGWVERKHFRQAREKSVSARIIQDNIRAYLEFK 47 (63)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 345788999999999999999999 778888999998887654
No 140
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=96.45 E-value=0.0015 Score=80.75 Aligned_cols=80 Identities=23% Similarity=0.341 Sum_probs=49.8
Q ss_pred hhhhhHHHHHHHHHHhhhhhhhhhccCC---CchhhHHHHHHHhhhhh--hcccchh---h-------------HHHHHH
Q 001972 767 RKSAHAAALIQQAFRVRSFRHRQSIQSS---DDVSEVSVDLVALGSLN--KVSKMIH---F-------------EDYLHF 825 (988)
Q Consensus 767 R~a~~AA~rIQ~aFR~~s~R~r~L~~~~---~d~~e~~~sIla~q~~~--r~~~~~~---~-------------~~~~~~ 825 (988)
+.++++.+..+..|+ .||+.|.... .+.++.|..|+.. +.. ...+-+. | +.++..
T Consensus 694 ~r~Gyp~R~~f~eF~---~RY~~L~~~~~~~~d~k~~~~~il~~-~~~~~~~~~~G~TKVF~r~~~~~~LE~~r~~~l~~ 769 (795)
T 1w7j_A 694 SAAGFPSRWTYQEFF---SRYRVLMKQKDVLSDRKQTCKNVLEK-LILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRA 769 (795)
T ss_dssp HHHSCCEEEEHHHHH---HHHGGGSCGGGCCSCHHHHHHHHHHH-HCCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHH
T ss_pred HHcCCCccccHHHHH---HHHHHhCCcccCCCCHHHHHHHHHHH-hCCCccceEEcCceEEEchhHHHHHHHHHHHHHHH
Confidence 678999999999999 8999987532 2446778888752 110 0011111 1 224556
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHH
Q 001972 826 AAIKIQQKYRGWKGRKDFLKIRNHI 850 (988)
Q Consensus 826 AAi~IQ~~~Rg~~~Rk~f~~~r~~~ 850 (988)
+|+.||+.+|||++||+|+++|+++
T Consensus 770 ~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 770 ACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6777777777777777777776543
No 141
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=96.33 E-value=0.041 Score=53.70 Aligned_cols=32 Identities=16% Similarity=0.133 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 001972 845 KIRNHIVKLQAHVRGHQVRKQYKKVVWSVSIV 876 (988)
Q Consensus 845 ~~r~~~v~IQa~~Rg~~aRk~y~~l~~sv~~l 876 (988)
=.+.++|+||+.+|||++||+|+-....+.++
T Consensus 43 yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv 74 (148)
T 3gn4_A 43 YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKV 74 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 34568999999999999999998886665544
No 142
>1ikn_C P50D, protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1
Probab=96.00 E-value=0.018 Score=54.38 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=60.1
Q ss_pred EEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc-------c----c-ceEEEecCeEEEecCC-C----
Q 001972 411 SIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI-------E----V-PAEVLTDNVIRCQAPS-H---- 472 (988)
Q Consensus 411 ~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~-------~----V-pae~~~~gvLrC~~Pp-h---- 472 (988)
.|.+.|=.-|+..||.+|.|+|. |... ...|.|=+. + + ++.+....-|+|.+|| |
T Consensus 5 ~I~r~s~~s~~v~GG~Ev~Llc~kv~K~-------dikV~F~e~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I 77 (119)
T 1ikn_C 5 KIVRMDRTAGCVTGGEEIYLLCDKVQKD-------DIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNI 77 (119)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTT-------SEEEEEEEECTTSCEEEEECCCCGGGEETTTEEEEECCCCSCTTC
T ss_pred EEEEeeCCccccCCCCEEEEEeccccCC-------CCEEEEEEeCCCCCceEEeEEeChhhccccceEEEECCCCCCCCc
Confidence 69999999999999999999999 5532 244544321 1 1 3455667899999999 2
Q ss_pred -CCceeEEEEEeCCCcccccceeeeeecC
Q 001972 473 -AAGRVPFYITGSNRLACSEVREFEYREK 500 (988)
Q Consensus 473 -~pG~V~l~Vt~~n~~~~Sev~~FeYr~~ 500 (988)
.|=.|.|++.-.....+|+...|+|...
T Consensus 78 ~~pV~V~i~L~r~sd~~~Sep~~FtY~P~ 106 (119)
T 1ikn_C 78 TKPASVFVQLRRKSDLETSEPKPFLYYPE 106 (119)
T ss_dssp SSCEEEEEEEEETTTCCBCCCEEEEEECC
T ss_pred CCCEEEEEEEEcCCCCCccCCcccEeecC
Confidence 4455566666544556899999999864
No 143
>1u36_A DNA-binding, nuclear factor NF-kappa-B P105 subunit; transcription factor, NF-KB, dimerization domain, intertwined folding; 1.89A {Mus musculus} SCOP: b.1.18.1 PDB: 1u3z_A 1u3y_A 3jv4_B 1bfs_A 1u3j_A 1u42_A 1u41_A 1nfi_B
Probab=95.52 E-value=0.033 Score=51.55 Aligned_cols=82 Identities=17% Similarity=0.161 Sum_probs=58.2
Q ss_pred EEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc-------cc-----ceEEEecCeEEEecCC-C----
Q 001972 411 SIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI-------EV-----PAEVLTDNVIRCQAPS-H---- 472 (988)
Q Consensus 411 ~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~-------~V-----pae~~~~gvLrC~~Pp-h---- 472 (988)
.|.+.|=.-|+..||.+|.++|. |... ...|.|=+. +. ++.+....-|+|.+|| |
T Consensus 5 ~I~r~s~~s~~v~GG~Ev~Llc~kv~K~-------dikV~F~E~~~~g~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I 77 (106)
T 1u36_A 5 KIVRMDRTAGCVTGGEEIWLLCDKVQKD-------DIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAICFKTPKYKDVNI 77 (106)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTT-------SCEEEEEECC----CEEEECBCCGGGEETTTEEEEECCCCSCTTC
T ss_pred EEEEeeCCccccCCCCEEEEEeccccCC-------CCEEEEEEeCCCCCceEEeeecCHHHcccceEEEEECCCCCCCcc
Confidence 69999999999999999999999 5532 234544321 11 2445567899999999 2
Q ss_pred -CCceeEEEEEeCCCcccccceeeeeec
Q 001972 473 -AAGRVPFYITGSNRLACSEVREFEYRE 499 (988)
Q Consensus 473 -~pG~V~l~Vt~~n~~~~Sev~~FeYr~ 499 (988)
.|=.|.|++.-.....+|+...|+|..
T Consensus 78 ~~pV~V~~~l~r~sd~~~Sep~~FtY~P 105 (106)
T 1u36_A 78 TKPASVFVQLRRKSDLETSEPKPFLYYP 105 (106)
T ss_dssp SSCEEEEEEEECTTTCCBCCCEEEEEEC
T ss_pred CCCEEEEEEEEcCCCCCccCCcCcEEcC
Confidence 444555555544456679999999963
No 144
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=95.06 E-value=0.038 Score=68.62 Aligned_cols=45 Identities=31% Similarity=0.566 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHh
Q 001972 844 LKIRNHIVKLQAHVRGHQVRKQYKKV---VWSVSIVEKAILRWRRRGS 888 (988)
Q Consensus 844 ~~~r~~~v~IQa~~Rg~~aRk~y~~l---~~sv~~lqk~~~rwr~~r~ 888 (988)
..+.+.+++||+.|||+++|++|+++ ..|+.++|+.+|+|..+|.
T Consensus 776 ~~l~~~~~~iQa~~Rg~l~R~~~~k~~~~r~a~~~IQ~~~R~~~~~r~ 823 (837)
T 1kk8_A 776 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 823 (837)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 34556789999999999999999988 6788999999999887654
No 145
>1my7_A NF-kappab P65 (RELA) subunit; immunoglobulin, IG, beta-sandwich, beta-sheet, homodimerdna- binding, transcription regulation, activator; 1.49A {Mus musculus} SCOP: b.1.18.1 PDB: 1my5_A 1bft_A
Probab=95.04 E-value=0.043 Score=51.37 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=60.0
Q ss_pred EEEeecCCCccCCCceEEEEEcc-cCCCCCCC--CCCceEEeeCCcccceEEEecCeEEEecCC-C-----CCceeEEEE
Q 001972 411 SIRDFSPDWAYSGAETKVLIIGM-FLGTKKLS--SDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-H-----AAGRVPFYI 481 (988)
Q Consensus 411 ~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~--~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pp-h-----~pG~V~l~V 481 (988)
.|.+.|=.-|+..||.+|.++|. |....-.+ -...| -+||++. |+++....-|+|.+|| | .|=.|.+++
T Consensus 5 ~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~VrF~e~~W-E~~g~f~-~~Dvh~Q~aIvfktPpY~~~~I~~pV~V~i~L 82 (114)
T 1my7_A 5 KICRVNRRSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGW-EARGSFS-QADVHRQVAIVFRTPPYADPSLQAPVRVSMQL 82 (114)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTTSCEEEEEETTE-EEECBCC-GGGBCTTSEEEEECCCCSCTTCCSCEEEEEEE
T ss_pred EEEEecCCceecCCCcEEEEEecccccCCCEEEEEccCe-EEecccC-hhhcccceeEEEECCCCCCCccCCCEEEEEEE
Confidence 69999999999999999999999 55321000 00023 2334432 2567788899999999 2 444555566
Q ss_pred EeCCCcccccceeeeeecC
Q 001972 482 TGSNRLACSEVREFEYREK 500 (988)
Q Consensus 482 t~~n~~~~Sev~~FeYr~~ 500 (988)
.-.+...+|+...|+|...
T Consensus 83 ~r~sd~~~Sep~~FtY~P~ 101 (114)
T 1my7_A 83 RRPSDRELSEPMEFQYLPD 101 (114)
T ss_dssp EETTTTEECCCEEEEEECC
T ss_pred EeCCCCCcCCCcccEEecC
Confidence 5444556799999999864
No 146
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=94.99 E-value=0.02 Score=41.09 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHhhHHHHHHH
Q 001972 822 YLHFAAIKIQQKYRGWKGRKDF 843 (988)
Q Consensus 822 ~~~~AAi~IQ~~~Rg~~~Rk~f 843 (988)
+++.||+.||++||+|+.|+..
T Consensus 4 ~Ee~aA~vIQrA~R~yl~rr~~ 25 (31)
T 2l53_B 4 SEEVSAMVIQRAFRRHLLQRSL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 5678999999999999998764
No 147
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=94.73 E-value=0.017 Score=40.10 Aligned_cols=21 Identities=29% Similarity=0.373 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHhhHHHHHH
Q 001972 822 YLHFAAIKIQQKYRGWKGRKD 842 (988)
Q Consensus 822 ~~~~AAi~IQ~~~Rg~~~Rk~ 842 (988)
.++.||+.||++||+|+.|+.
T Consensus 4 ~Ee~aA~vIQrA~R~yl~~~~ 24 (27)
T 2kxw_B 4 QEEVSAIVIQRAYRRYLLKQK 24 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 567899999999999998753
No 148
>1oy3_C Transcription factor P65; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: b.1.18.1 PDB: 1k3z_A
Probab=93.91 E-value=0.1 Score=50.17 Aligned_cols=82 Identities=17% Similarity=0.180 Sum_probs=60.6
Q ss_pred EEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEe--------eCCcccceEEEecCeEEEecCC-C-----CCc
Q 001972 411 SIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCM--------FGEIEVPAEVLTDNVIRCQAPS-H-----AAG 475 (988)
Q Consensus 411 ~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~--------FGd~~Vpae~~~~gvLrC~~Pp-h-----~pG 475 (988)
.|.++|=.-|+..||.||.|+|. +... ...|. ||++. |+++....-|+|.+|| | .|=
T Consensus 5 ~I~r~s~~sg~v~GG~Ev~LLceKv~K~-------Di~VrF~e~~WE~~g~f~-~~dVh~Q~AIvfkTPpY~~~~I~~pV 76 (136)
T 1oy3_C 5 KICRVNRNSGSCLGGDEIFLLCDKVQKE-------DIEVYFTGPGWEARGSFS-QADVHRQVAIVFRTPPYADPSLQAPV 76 (136)
T ss_dssp CEEEESCSEEETTCCCEEEEEESCCCTT-------SCEEEEEETTEEEECBCC-GGGBCTTSEEEEECCCCSCTTCCSCE
T ss_pred EEEEecCCccccCCCcEEEEEccccccC-------CCEEEEEccCeEEecccC-hhheecceEEEEECCCCCCccCCCCe
Confidence 69999999999999999999999 5432 23333 33331 2566777899999999 3 455
Q ss_pred eeEEEEEeCCCcccccceeeeeecC
Q 001972 476 RVPFYITGSNRLACSEVREFEYREK 500 (988)
Q Consensus 476 ~V~l~Vt~~n~~~~Sev~~FeYr~~ 500 (988)
.|.+++.-.+...+|+...|+|...
T Consensus 77 ~V~iqL~rpsd~~~Sep~~F~Y~P~ 101 (136)
T 1oy3_C 77 RVSMQLRRPSDRELSEPMEFQYLPD 101 (136)
T ss_dssp EEEEEEEETTTTEECCCEEEEEECC
T ss_pred EEEEEEEeCCCCCccCCcceEEecC
Confidence 6666666545557899999999864
No 149
>1zk9_A Transcription factor RELB; NF-KB, transcription factors, intertwined dimer; 2.18A {Mus musculus} PDB: 1zka_A 3jv6_A 3jv4_A 3jss_A 3juz_A 3jv0_A
Probab=93.43 E-value=0.025 Score=52.58 Aligned_cols=88 Identities=15% Similarity=0.176 Sum_probs=58.8
Q ss_pred eEEEeecCCCccCCCceEEEEEcc-cCCCCCCC--CCCceEEeeCCcccceEEEecCeEEEecCC-C---CCceeEEEEE
Q 001972 410 FSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLS--SDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-H---AAGRVPFYIT 482 (988)
Q Consensus 410 f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~--~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pp-h---~pG~V~l~Vt 482 (988)
..|.+.|=.-|+..||.||.++|. |....-.+ -...|.. ||++ .++++....-|+|.+|| | -...|.|.+.
T Consensus 13 L~I~r~s~~sg~v~GG~Ev~LLc~kv~K~Di~V~F~e~~WE~-~~~f-~~~Dvh~Q~aIvf~tPpY~~~~I~~pV~V~i~ 90 (110)
T 1zk9_A 13 LRICRINKESGPCTGGEELYLLCDKVQKEDISVVFSTASWEG-RADF-SQADVHRQIAIVFKTPPYEDLEISEPVTVNVF 90 (110)
T ss_dssp SCEEEESCSCCCTTCCCCCCEEESCCCTTSCCCEEEETTEEE-ECCC-CGGGCCCCCCCCCCCCCCSCTTCSSCEEEEEC
T ss_pred CEEEEecCCccccCCCCEEEEEecccccCCcEEEEechheee-cccc-CcccccccceEEEECCCCCCcccCCCeEEEEE
Confidence 479999999999999999999999 55421000 0002322 4443 23567778899999999 2 2344444444
Q ss_pred --eCCCcccccceeeeeec
Q 001972 483 --GSNRLACSEVREFEYRE 499 (988)
Q Consensus 483 --~~n~~~~Sev~~FeYr~ 499 (988)
-.+...+|+...|+|..
T Consensus 91 L~r~sd~~~Sep~~FtY~P 109 (110)
T 1zk9_A 91 LQRLTDGVCSEPLPFTYLP 109 (110)
T ss_dssp CBCTTTCCBCCCEEEEECC
T ss_pred EEeCCCCCccCCcCcEEcC
Confidence 33455689999999963
No 150
>1a3q_A Protein (nuclear factor kappa-B P52); transcription factor, immune response, DNA-protein complex, transcription/DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 3do7_B 3jv6_B 3jv5_A
Probab=92.53 E-value=0.29 Score=52.94 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=59.2
Q ss_pred eEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc-----cc-----ceEEEecCeEEEecCC-C-----
Q 001972 410 FSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI-----EV-----PAEVLTDNVIRCQAPS-H----- 472 (988)
Q Consensus 410 f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~-----~V-----pae~~~~gvLrC~~Pp-h----- 472 (988)
..|.++|-.-|+..||.||.|+|. |... ...|.|=+. +. ++.+....-|+|.+|| +
T Consensus 186 L~I~r~s~~sg~v~GG~Ev~Llc~kv~K~-------Di~V~F~E~~~~gWE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~ 258 (285)
T 1a3q_A 186 LKISRMDKTAGSVRGGDEVYLLCDKVQKD-------DIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE 258 (285)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESSCCTT-------TEEEEEEECSSSCEEEECBCCGGGEETTTEEEEECCCCSCTTCS
T ss_pred CeEEEecCCccccCCCCEEEEEeccccCC-------CCEEEEEecCCCCCEEeeEeCHHHccceeeEEEECCCCCCCCCC
Confidence 479999999999999999999999 5432 244444331 11 2345557789999999 2
Q ss_pred CCceeEEEEEeCCCcccccceeeeee
Q 001972 473 AAGRVPFYITGSNRLACSEVREFEYR 498 (988)
Q Consensus 473 ~pG~V~l~Vt~~n~~~~Sev~~FeYr 498 (988)
.|=.|.|++.-.....+|+...|+|.
T Consensus 259 ~pV~V~iqL~r~sd~~~Sep~~FtY~ 284 (285)
T 1a3q_A 259 RPVTVFLQLKRKRGGDVSDSKQFTYY 284 (285)
T ss_dssp SCEEEEEEEEETTTCCBCCCEEEEEE
T ss_pred CCeEEEEEEEeCCCCCccCCCCceeC
Confidence 45556666665455668999999995
No 151
>3gn4_A Myosin-VI; unconventional myosin, motility, lever ARM, 3-helix bundle, actin-binding, ATP-binding, calmodulin-binding, coiled coil; 2.70A {Sus scrofa}
Probab=91.90 E-value=0.23 Score=48.52 Aligned_cols=33 Identities=27% Similarity=0.374 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 001972 822 YLHFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQ 854 (988)
Q Consensus 822 ~~~~AAi~IQ~~~Rg~~~Rk~f~~~r~~~v~IQ 854 (988)
.+..|++.||+.+|||++||.|+-.-+...++-
T Consensus 43 yR~~~~i~iQktvR~~L~rkkhkPRi~g~~kv~ 75 (148)
T 3gn4_A 43 YRAEACIKMQKTIRMWLCKRRHKPRIDGLVKVG 75 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 467899999999999999999876654444443
No 152
>1nfk_A Protein (nuclear factor kappa-B (NF-KB)); NF-KB P50, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 2v2t_B 1ooa_A 1lei_B* 1le9_B 1le5_B* 2i9t_B 1vkx_B* 3gut_B 2o61_B
Probab=91.88 E-value=0.35 Score=53.20 Aligned_cols=85 Identities=16% Similarity=0.173 Sum_probs=61.1
Q ss_pred ceEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc-------c----c-ceEEEecCeEEEecCC-C--
Q 001972 409 LFSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI-------E----V-PAEVLTDNVIRCQAPS-H-- 472 (988)
Q Consensus 409 ~f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~-------~----V-pae~~~~gvLrC~~Pp-h-- 472 (988)
-..|.++|-.-|+..||.||.|+|. |.. ...-|.|=+. + + ++.+....-|+|.+|| +
T Consensus 209 eL~I~r~s~~sg~v~GG~Ev~LLc~kv~K-------~Di~VrF~E~~~~g~~WE~~g~f~~~Dvh~Q~AIvfkTPpY~~~ 281 (325)
T 1nfk_A 209 NLKIVRMDRTAGCVTGGEEIYLLCDKVQK-------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDV 281 (325)
T ss_dssp CCCEEEESCSCEESSCCCEEEEEESCCCT-------TTEEEEEEECCCSSCCEEEECBCCGGGBCTTSEEEEECCCTTSS
T ss_pred CCeEEEecCCccccCCCCEEEEEeccccc-------CCCEEEEEEeCCCCCeeEEeeeeCHHHccceeEEEEECCCCCCC
Confidence 3489999999999999999999999 542 2344544321 1 1 3445556789999999 2
Q ss_pred ---CCceeEEEEEeCCCcccccceeeeeecC
Q 001972 473 ---AAGRVPFYITGSNRLACSEVREFEYREK 500 (988)
Q Consensus 473 ---~pG~V~l~Vt~~n~~~~Sev~~FeYr~~ 500 (988)
.|=.|.|++.-.....||+...|+|...
T Consensus 282 ~I~~pV~V~iqL~r~sd~~~Sep~~FtY~P~ 312 (325)
T 1nfk_A 282 NITKPASVFVQLRRKSDLETSEPKPFLYYPE 312 (325)
T ss_dssp CCCSSEEEEEEEEETTTCCBCCCEEEEEECC
T ss_pred CcCCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 4556666665544557899999999864
No 153
>2v2t_A RELB, transcription factor RELB; 4-diphosphocytidyl-2C-methyl-D-erythritol, aquifex aeolicus, nucleotide-binding, isoprene biosynthesis; 3.05A {Mus musculus} PDB: 3do7_A
Probab=91.34 E-value=0.25 Score=53.46 Aligned_cols=85 Identities=15% Similarity=0.192 Sum_probs=62.5
Q ss_pred CceEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc--cc-----ceEEEecCeEEEecCC-C-----C
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI--EV-----PAEVLTDNVIRCQAPS-H-----A 473 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~--~V-----pae~~~~gvLrC~~Pp-h-----~ 473 (988)
+-..|.++|-.-|+..||.||.|+|. |. +...-|.|=+. +. ++.+....-|+|.+|| + .
T Consensus 189 ~eL~I~r~s~~sgsv~GG~Ev~LLc~kv~-------K~dikV~F~e~~WE~~~~f~~~Dvh~Q~aIvf~tPpY~~~~I~~ 261 (288)
T 2v2t_A 189 SELRICRINKESGPCTGGEELYLLCDKVQ-------KEDISVVFSTASWEGRADFSQADVHRQIAIVFKTPPYEDLEISE 261 (288)
T ss_dssp SCCCBCCCSCSCCCSSCCCEEEEEBSSCC-------TTSEEEEEECSSCEEECCCCGGGEETTTEEEEECCCCTTCCCSS
T ss_pred CCCeEEEeeCCccccCCCCEEEEEecccc-------cCCCEEEEEecceEEeeEeChhhccceeEEEEECCCCCCCCcCC
Confidence 34479999999999999999999999 54 22355666442 22 3445566789999999 2 5
Q ss_pred CceeEEEEEeCCCcccccceeeeeec
Q 001972 474 AGRVPFYITGSNRLACSEVREFEYRE 499 (988)
Q Consensus 474 pG~V~l~Vt~~n~~~~Sev~~FeYr~ 499 (988)
|=.|.|++.-.....||+...|+|..
T Consensus 262 pV~V~iqL~r~sd~~~Sep~~FtY~P 287 (288)
T 2v2t_A 262 PVTVNVFLQRLTDGVCSEPLPFTYLP 287 (288)
T ss_dssp CCBCCEEEEETTTCCBCCCBCCBCCC
T ss_pred CeEEEEEEEeCCCCCcCCCcCcEEcC
Confidence 56677777665455789999999963
No 154
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=91.26 E-value=3.4 Score=52.41 Aligned_cols=96 Identities=17% Similarity=0.113 Sum_probs=59.0
Q ss_pred hhhhhHHHHHHHHHHhhhhhhhhhccCC----CchhhHHHHHHHhhhhhh--cccchh---h-------------HHHHH
Q 001972 767 RKSAHAAALIQQAFRVRSFRHRQSIQSS----DDVSEVSVDLVALGSLNK--VSKMIH---F-------------EDYLH 824 (988)
Q Consensus 767 R~a~~AA~rIQ~aFR~~s~R~r~L~~~~----~d~~e~~~sIla~q~~~r--~~~~~~---~-------------~~~~~ 824 (988)
+.++++.+..+..|. .||+.|.... .+.++.|..|+.. +-+. ..+.+. | +.++.
T Consensus 688 ~r~Gfp~r~~~~~F~---~RY~~L~~~~~~~~~d~~~~~~~ll~~-~~~~~~~~~~G~tkVF~r~~~l~~LE~~R~~~l~ 763 (1010)
T 1g8x_A 688 TRKGFPNRIIYADFV---KRYYLLAPNVPRDAEDSQKATDAVLKH-LNIDPEQYRFGITKIFFRAGQLARIEEAREQRLG 763 (1010)
T ss_dssp HTTSCCEEEEHHHHH---HHHGGGSTTCCTTCSCHHHHHHHHHHH-TTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHH
T ss_pred HHhCCcccccHHHHH---HHHHHhCCCCCcCCCCHHHHHHHHHHH-cCCCccceeehhhhhhhcccchhHHHHHHHHHHH
Confidence 778999999999999 8999887531 2346778888753 1100 001111 1 33577
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHH---------HHHHHHHHHHHhHHHHHHHHHH
Q 001972 825 FAAIKIQQKYRGWKGRKDFLKIR---------NHIVKLQAHVRGHQVRKQYKKV 869 (988)
Q Consensus 825 ~AAi~IQ~~~Rg~~~Rk~f~~~r---------~~~v~IQa~~Rg~~aRk~y~~l 869 (988)
.+|+.||...|+...++-+.... ..+..||+.++++ +.|+..
T Consensus 764 ~~~~~iQY~~~a~~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f---~~fk~~ 814 (1010)
T 1g8x_A 764 SEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAH---KEYKKT 814 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHH---HHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHH---HHHHhc
Confidence 88999997776665443322221 2366788888865 455443
No 155
>1svc_P Protein (nuclear factor kappa-B (NF-KB)); DNA-binding, transcription regulation, activator, nuclear protein, phosphorylation, repeat, DNA; HET: DNA; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=90.77 E-value=0.41 Score=53.29 Aligned_cols=85 Identities=15% Similarity=0.169 Sum_probs=61.1
Q ss_pred ceEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc-----------cc-ceEEEecCeEEEecCC-C--
Q 001972 409 LFSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI-----------EV-PAEVLTDNVIRCQAPS-H-- 472 (988)
Q Consensus 409 ~f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~-----------~V-pae~~~~gvLrC~~Pp-h-- 472 (988)
-..|.++|-.-|+..||.||.|+|. |.. ...-|.|=+. .+ ++.+....-|+|.+|| +
T Consensus 249 eL~I~R~s~~sgsv~GG~Ev~LLc~Kv~K-------~DikVrF~E~~~~g~~WE~~g~f~~~DVH~Q~AIvfkTPpY~~~ 321 (365)
T 1svc_P 249 NLKIVRMDRTAGCVTGGEEIYLLCDKVQK-------DDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDI 321 (365)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESSCCG-------GGCEEEEEEEETTTEEEEEECBCCGGGEETTTEEEEECCCCSCS
T ss_pred CCeEEEecCCccccCCCCEEEEEeccccc-------CCCEEEEEEeCCCCCeeEEeeeeChHHhcceeeEEEECCCCCCC
Confidence 3489999999999999999999999 442 2344555332 12 3455567789999999 2
Q ss_pred ---CCceeEEEEEeCCCcccccceeeeeecC
Q 001972 473 ---AAGRVPFYITGSNRLACSEVREFEYREK 500 (988)
Q Consensus 473 ---~pG~V~l~Vt~~n~~~~Sev~~FeYr~~ 500 (988)
.|=.|.|++.-.....||+...|+|...
T Consensus 322 ~I~~pV~V~iqL~R~sd~~~Sep~~FtY~P~ 352 (365)
T 1svc_P 322 NITKPASVFVQLRRKSDLETSEPKPFLYYPE 352 (365)
T ss_dssp CCSSCEEEEEEEECTTTCCBCCCEEEEEECC
T ss_pred CcCCCeEEEEEEEcCCCCCccCCccceeecC
Confidence 4555555665444457899999999864
No 156
>1ikn_A P65, protein (NF-kappa-B P65 subunit); transcription factor, IKB/NFKB complex; 2.30A {Mus musculus} SCOP: b.1.18.1 b.2.5.3 PDB: 1nfi_A 2ram_A* 1ram_A* 2i9t_A 1lei_A* 1le9_A 1le5_A* 1vkx_A* 3gut_A
Probab=90.67 E-value=0.46 Score=51.34 Aligned_cols=85 Identities=18% Similarity=0.173 Sum_probs=59.2
Q ss_pred ceEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc--ccc-----eEEEecCeEEEecCC-C-----CC
Q 001972 409 LFSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI--EVP-----AEVLTDNVIRCQAPS-H-----AA 474 (988)
Q Consensus 409 ~f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~--~Vp-----ae~~~~gvLrC~~Pp-h-----~p 474 (988)
-..|.++|-.-|+.+||.||.|+|. |... ..-|.|=+. +.- +.+....-|+|.+|| | .|
T Consensus 175 eL~I~r~s~~sg~v~GG~Ev~Llc~kv~K~-------di~V~F~e~~WE~~~~f~~~dvh~Q~aIvf~tPpY~~~~I~~p 247 (286)
T 1ikn_A 175 ELKICRVNRNSGSCLGGDEIFLLCDKVQKE-------DIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAP 247 (286)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESCCCTT-------SCEEEEEETTEEEECBCCGGGBCTTSEEEEECCCCSCTTCSSC
T ss_pred CCeEEEecCCccccCCCCEEEEEecccccC-------CCEEEEeccceEEeeecCHHHhccceeEEEECCCCCCCCcCCC
Confidence 3479999999999999999999999 5432 233433221 222 334456789999999 2 44
Q ss_pred ceeEEEEEeCCCcccccceeeeeecC
Q 001972 475 GRVPFYITGSNRLACSEVREFEYREK 500 (988)
Q Consensus 475 G~V~l~Vt~~n~~~~Sev~~FeYr~~ 500 (988)
=.|.|++.-.....+|+...|+|...
T Consensus 248 V~V~i~L~r~sd~~~Sep~~FtY~P~ 273 (286)
T 1ikn_A 248 VRVSMQLRRPSDRELSEPMEFQYLPD 273 (286)
T ss_dssp EEEEEEEECTTTCCBCCCEEEEEECC
T ss_pred EEEEEEEEeCCCCCcCCCcCcEEecC
Confidence 45555555444566899999999864
No 157
>2o61_A Transcription factor P65/interferon regulatory FA 7/interferon regulatory factor...; protein-DNA complex, transcription-DNA complex; 2.80A {Homo sapiens}
Probab=90.44 E-value=0.4 Score=56.09 Aligned_cols=85 Identities=18% Similarity=0.180 Sum_probs=60.4
Q ss_pred eEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc--c----c-ceEEEecCeEEEecCC-C-----CCc
Q 001972 410 FSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI--E----V-PAEVLTDNVIRCQAPS-H-----AAG 475 (988)
Q Consensus 410 f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~--~----V-pae~~~~gvLrC~~Pp-h-----~pG 475 (988)
..|.++|-.-|+.+||.||.|+|. |.. ...-|.|=+. + + ++.+....-|+|.+|| + .|=
T Consensus 177 L~I~r~s~~sgsv~GG~Ev~LLc~kv~K-------~DikVrF~e~~WE~~a~f~~~Dvh~Q~AIvfkTPpY~~~~I~~pV 249 (540)
T 2o61_A 177 LKICRVNRNSGSCLGGDEIFLLCDKVQK-------EDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPV 249 (540)
T ss_dssp CCEEEESCSEEETTCCCEEEEEESSCBT-------TBCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSSCCSSCE
T ss_pred CeEEEecCCccccCCCCeEEEEeccccc-------CCcEEEEecccceeccccChhhhcceeeEEEeCCCCCCCCCCCCe
Confidence 369999999999999999999999 543 2344544322 1 2 3556677889999999 2 444
Q ss_pred eeEEEEEeCCCcccccceeeeeecCC
Q 001972 476 RVPFYITGSNRLACSEVREFEYREKP 501 (988)
Q Consensus 476 ~V~l~Vt~~n~~~~Sev~~FeYr~~~ 501 (988)
.|.|++.-.....+|+...|+|...+
T Consensus 250 ~V~iqL~r~sd~~~Sep~~FtY~P~~ 275 (540)
T 2o61_A 250 RVSMQLRRPSDRELSEPMEFQYLPDG 275 (540)
T ss_dssp EEEEEEECGGGCCBCCCEEEEEECC-
T ss_pred EEEEEEEeCCCCCcCCCcCcEEecCC
Confidence 55555554345667999999998653
No 158
>1p7h_L Nuclear factor of activated T-cells, cytoplasmic 2; DNA binding protein, transcription regulation, activator, transcription/DNA complex; 2.60A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3 PDB: 2o93_L 1a02_N* 1pzu_B 1owr_M 2as5_N 1s9k_C 3qrf_N 1nfa_A 1a66_A*
Probab=90.37 E-value=0.47 Score=51.30 Aligned_cols=88 Identities=15% Similarity=0.296 Sum_probs=59.9
Q ss_pred CceEEEeecCCCccCCCceEEEEEcccCCCCC------C--CCCCceEEeeCCcccceEEEecCeEEEecCC-C-----C
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKK------L--SSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-H-----A 473 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~------~--~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pp-h-----~ 473 (988)
....|.+.|-.-|+..||.||.|+|..+...- . -....| -+||++. .++....-|+|.+|| | .
T Consensus 184 ~~l~I~r~s~~sg~v~GG~Ei~Llc~kv~KDikVrF~E~~~dg~~~W-e~~g~f~--~dvh~Q~AIvfkTPpY~~~~I~~ 260 (286)
T 1p7h_L 184 ELPMVERQDTDSCLVYGGQQMILTGQNFTSESKVVFTEKTTDGQQIW-EMEATVD--KDKSQPNMLFVEIPEYRNKHIRT 260 (286)
T ss_dssp CCCEEEEESCSEEETTCCCEEEEEEESCCSSCEEEEEEECSSSCEEE-EEEECBC--TTTCBTTEEEEECCCCSCTTCSS
T ss_pred CCCeEEEeccccccccCCcEEEEEecccCCCcEEEEEEECCCCCcce-EEeEEeC--ccccccceEEEECCCCccCccCC
Confidence 45699999999999999999999999442100 0 000123 2344442 345567789999999 2 5
Q ss_pred CceeEEEEEeCCCcccccceeeeeec
Q 001972 474 AGRVPFYITGSNRLACSEVREFEYRE 499 (988)
Q Consensus 474 pG~V~l~Vt~~n~~~~Sev~~FeYr~ 499 (988)
|=.|.|++.-+ ...+|+...|+|..
T Consensus 261 pV~V~~~l~r~-d~~~Sep~~FtY~P 285 (286)
T 1p7h_L 261 PVKVNFYVING-KRKRSQPQHFTYHP 285 (286)
T ss_dssp CEEEEEEEEET-TTEECCCEEEEEEC
T ss_pred CeEEEEEEeCC-CCCcCCCcCceEec
Confidence 55666666555 44689999999963
No 159
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=89.96 E-value=0.05 Score=69.00 Aligned_cols=100 Identities=13% Similarity=0.085 Sum_probs=61.5
Q ss_pred hhhhhHHHHHHHHHHhhhhhhhhhccCC-----CchhhHHHHHHHhhhhhh--cccchh---h-------------HHHH
Q 001972 767 RKSAHAAALIQQAFRVRSFRHRQSIQSS-----DDVSEVSVDLVALGSLNK--VSKMIH---F-------------EDYL 823 (988)
Q Consensus 767 R~a~~AA~rIQ~aFR~~s~R~r~L~~~~-----~d~~e~~~sIla~q~~~r--~~~~~~---~-------------~~~~ 823 (988)
+.++++.+..+..|. .||+.|.... .+.++.|..|+.. +-+. ..+.+. | +.++
T Consensus 683 ~r~Gfp~r~~~~~F~---~RY~~L~~~~~~~~~~d~~~~~~~ll~~-~~~~~~~~~~G~tkVF~r~~~~~~LE~~R~~~l 758 (995)
T 2ycu_A 683 CRQGFPNRILFQEFR---QRYEILTPNAIPKGFMDGKQACEKMIQA-LELDPNLYRVGQSKIFFRAGVLAQLEEERASEQ 758 (995)
T ss_dssp HHHSCCEEEEHHHHH---HHHGGGSTTTSCSCCCCSCCSCCCSCCC-SSEEESSEEEESSCTTHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCccccHHHHH---HHHHHhCcccccccCCCHHHHHHHHHHH-cCCChhheeecceEEEEecchhhhHHHHHHHHh
Confidence 678999999999999 8999886421 1223444444321 0000 000000 1 1111
Q ss_pred -----HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 001972 824 -----HFAAIKIQQKYRGWKGRKDFLKIRNHIVKLQAHVRGHQVRKQYKKVV 870 (988)
Q Consensus 824 -----~~AAi~IQ~~~Rg~~~Rk~f~~~r~~~v~IQa~~Rg~~aRk~y~~l~ 870 (988)
..-|..++..+|+..++..++..+.+++.||++||++++++.+.+..
T Consensus 759 ~~~eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp 810 (995)
T 2ycu_A 759 TKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPP 810 (995)
T ss_dssp HHHHHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccc
Confidence 22344566677777777778888889999999999998888776553
No 160
>3iag_C Recombining binding protein suppressor of hairless; protein-DNA complex, signaling, transcription, notch, activator, alternative splicing; HET: XYL; 2.00A {Mus musculus} PDB: 3brg_C* 3nbn_A 2f8x_C 3v79_C*
Probab=89.34 E-value=0.95 Score=50.67 Aligned_cols=68 Identities=16% Similarity=0.323 Sum_probs=56.2
Q ss_pred eEEEEEcccCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCC-----------CCCceeEEEEEeCCCccccccee
Q 001972 426 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-----------HAAGRVPFYITGSNRLACSEVRE 494 (988)
Q Consensus 426 tkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pp-----------h~pG~V~l~Vt~~n~~~~Sev~~ 494 (988)
.-|-|.|..| ..++.|-|||+++.|.+-.+-.|.|..|+ ..|..||+.+--.+++.-+--..
T Consensus 343 amlEl~G~nF-------~~~L~VWFG~v~aeT~yR~~e~l~c~vP~~~~~~~~w~~~~~~~~Vpi~LVR~DGviy~t~~t 415 (422)
T 3iag_C 343 AMLELTGQNF-------TPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLT 415 (422)
T ss_dssp CEEEEEEESC-------CTTEEEEETTEECCEEEEETTEEEEECCCGGGTSTTCSSCCSCEEEEEEEEETTSEEEEEEEE
T ss_pred eEEEEEccCC-------CCCceEEECCCCceeEEeccceEEEeCCCHHHhccCccccCCceEEEEEEEecCCEEeeCCcc
Confidence 5688999955 23599999999999999999999999999 15678999888777777666678
Q ss_pred eeeecC
Q 001972 495 FEYREK 500 (988)
Q Consensus 495 FeYr~~ 500 (988)
|+|...
T Consensus 416 fty~pe 421 (422)
T 3iag_C 416 FTYTPE 421 (422)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 888753
No 161
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=88.94 E-value=1.2 Score=38.96 Aligned_cols=67 Identities=10% Similarity=0.092 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHhh
Q 001972 919 RKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 985 (988)
Q Consensus 919 rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~~ 985 (988)
..+++++++.|+..|+.+. +..+++++--.+..+.++++...+.+..++..|+.+...-++.|.+++
T Consensus 8 leqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LL 75 (81)
T 2jee_A 8 FEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688899999999999987 777787777777777778887777788888888888888888887765
No 162
>1gji_A C-REL protein, C-REL proto-oncogene protein; NF-KB/DNA complex, transcription factor, C-REL homodimer, transcription/DNA complex; 2.85A {Gallus gallus} SCOP: b.1.18.1 b.2.5.3
Probab=87.24 E-value=0.9 Score=48.86 Aligned_cols=84 Identities=15% Similarity=0.129 Sum_probs=59.2
Q ss_pred ceEEEeecCCCccCCCceEEEEEcc-cCCCCCCCCCCceEEeeCCc--c----c-ceEEEecCeEEEecCC-C----CCc
Q 001972 409 LFSIRDFSPDWAYSGAETKVLIIGM-FLGTKKLSSDTKWGCMFGEI--E----V-PAEVLTDNVIRCQAPS-H----AAG 475 (988)
Q Consensus 409 ~f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~~~~~~~~~c~FGd~--~----V-pae~~~~gvLrC~~Pp-h----~pG 475 (988)
-..|.+.|=.-|+..||.||.|+|. |... ..-|.|=+. + + ++.+....-|+|.+|| + .|=
T Consensus 178 eL~I~r~s~~sg~v~GG~Ev~LLc~kv~K~-------di~VrF~e~~We~~~~f~~~Dvh~Q~AIvf~TPpY~~~I~~pV 250 (275)
T 1gji_A 178 ELRICRVNKNCGSVKGGDEIFILCDKVQKD-------DIEVRFVLDNWEAKGSFSQADVHRQVAIVFRTPPFLRDITEPI 250 (275)
T ss_dssp CCCEEEESCSEEETTCCCEEEEEESCCCGG-------GCEEEEEETTEEEECBCCGGGEETTTEEEEECCCCSSCCSSCE
T ss_pred CCEEEEeeCCccccCCCCEEEEEecccccC-------CCEEEEEccceeeccccChhhhcceeeEEEeCCCCCcCCCCCE
Confidence 4479999999999999999999999 5422 244444331 1 1 3556677889999999 2 444
Q ss_pred eeEEEEEeCCCcccccceeeeeec
Q 001972 476 RVPFYITGSNRLACSEVREFEYRE 499 (988)
Q Consensus 476 ~V~l~Vt~~n~~~~Sev~~FeYr~ 499 (988)
.|.|++.-.....||+...|+|..
T Consensus 251 ~V~iqL~r~sd~~~Sep~~FtY~P 274 (275)
T 1gji_A 251 TVKMQLRRPSDQEVSEPMDFRYLP 274 (275)
T ss_dssp EEEEEEEEGGGTEECCCEEEEEEC
T ss_pred EEEEEEEcCCCCCccCCcCcEEcC
Confidence 455555544445589999999974
No 163
>1imh_C NF-AT5, tonebp, nuclear factor of activated T cells 5; beta barrel, protein-DNA complex, double helix, DNA encirclement, transcription/DNA complex; 2.86A {Homo sapiens} SCOP: b.1.18.1 b.2.5.3
Probab=87.08 E-value=1.3 Score=47.83 Aligned_cols=88 Identities=25% Similarity=0.348 Sum_probs=59.1
Q ss_pred CceEEEeecCCCccCCCceEEEEEcc-cCCCCC------CCCCCceEEeeCCcccceEEEecCeEEEecCC-C-----CC
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGM-FLGTKK------LSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS-H-----AA 474 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~-f~~~~~------~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pp-h-----~p 474 (988)
-...|.++|-.-|+..||.||.|+|. |..+-+ ......|. +||++. ++.+ ...-|+|.+|| + .|
T Consensus 180 ~~l~I~r~s~~sg~v~GG~Ev~Llc~kv~KdikVrF~E~~~d~~~WE-~~~~f~-~~dv-hQ~aIvf~tPpY~~~~I~~p 256 (281)
T 1imh_C 180 GVPEILKKSLHSCSVKGEEEVFLIGKNFLKGTKVIFQENVSDENSWK-SEAEID-MELF-HQNHLIVKVPPYHDQHITLP 256 (281)
T ss_dssp CCCEEEEESCCEEETTCCCEEEEEEECCCTTCEEEEESSSCTTCSCE-EEECBC-GGGC-CSSEEEEECCCCSCTTCSSC
T ss_pred CCCeEEEEecCccccCCCcEEEEEeeccCCCcEEEEEEeCCCCCceE-EeEEeC-hhhc-ccceEEEECCCCccCccCCC
Confidence 35689999999999999999999998 442100 00112343 255543 2223 36899999999 2 45
Q ss_pred ceeEEEEEeCCCcccccceeeeeec
Q 001972 475 GRVPFYITGSNRLACSEVREFEYRE 499 (988)
Q Consensus 475 G~V~l~Vt~~n~~~~Sev~~FeYr~ 499 (988)
=.|.|++.- +...+|+...|+|..
T Consensus 257 V~V~iqL~r-sd~~~S~p~~FtY~P 280 (281)
T 1imh_C 257 VSVGIYVVT-NAGRSHDVQPFTYTP 280 (281)
T ss_dssp EEEEEEEEE-TTEECCSCEEEEEEC
T ss_pred eEEEEEEEe-CCCCccCCcCceecC
Confidence 566666664 444569999999963
No 164
>2l53_B CAM, voltage-gated sodium channel type V alpha isoform variant; calmodulin, IQ motif, complex, Ca-binding protein; NMR {Homo sapiens}
Probab=85.71 E-value=0.51 Score=33.83 Aligned_cols=19 Identities=16% Similarity=0.268 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhHHHHHHH
Q 001972 848 NHIVKLQAHVRGHQVRKQY 866 (988)
Q Consensus 848 ~~~v~IQa~~Rg~~aRk~y 866 (988)
.++++||..||+|+.|+..
T Consensus 7 ~aA~vIQrA~R~yl~rr~~ 25 (31)
T 2l53_B 7 VSAMVIQRAFRRHLLQRSL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4799999999999998753
No 165
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=85.14 E-value=1.6 Score=49.18 Aligned_cols=70 Identities=19% Similarity=0.162 Sum_probs=51.7
Q ss_pred CceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCceEEeeCC-cccc-eEEE--ecCeEEEecCCC-C--CceeEEE
Q 001972 408 QLFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGE-IEVP-AEVL--TDNVIRCQAPSH-A--AGRVPFY 480 (988)
Q Consensus 408 q~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd-~~Vp-ae~~--~~gvLrC~~Pph-~--pG~V~l~ 480 (988)
..++|+.+||+.+ ..|..|+|.|.+|... -.|.||+ +++. ...+ ++..|+-.+|.- . +|.|.|.
T Consensus 112 PaPtITSISpe~~--~aGd~VTItGsNF~~i-------skV~FgG~veaT~~~svs~S~T~ItVtVPaGA~~~sG~ItVv 182 (439)
T 3orj_A 112 AAPSITKISNCMP--NVGEPIIVYGSGLTEI-------AKVVFPGNVVVTEGIISDLDGEYFMVDMPAGVSEEGGSIFVE 182 (439)
T ss_dssp SCCEEEEESCSSC--CTTCEEEEEEECCTTC-------CEEEETTTEEECSSCEECTTSSEEEEECCTTCCTTCBCCEEE
T ss_pred CCCEEEEeCCCCC--CCCCEEEEEccCCCce-------eEEEECCCeeEEEEEEecCCCCEEEEEecCCCcCCCceEEEE
Confidence 4568999999876 5789999999977442 6899986 5554 2334 678999999996 4 5777654
Q ss_pred EEeCCCcc
Q 001972 481 ITGSNRLA 488 (988)
Q Consensus 481 Vt~~n~~~ 488 (988)
..++..
T Consensus 183 --T~~GtA 188 (439)
T 3orj_A 183 --GSNGGA 188 (439)
T ss_dssp --ETTEEE
T ss_pred --eCCCcE
Confidence 445444
No 166
>2kxw_B Sodium channel protein type 2 subunit alpha; action potential, amino acid motifs, animals, autism, biomol brain chemistry; NMR {Rattus norvegicus}
Probab=84.55 E-value=0.47 Score=32.98 Aligned_cols=17 Identities=12% Similarity=0.141 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHhHHHHH
Q 001972 848 NHIVKLQAHVRGHQVRK 864 (988)
Q Consensus 848 ~~~v~IQa~~Rg~~aRk 864 (988)
.++++||..||+|+.|+
T Consensus 7 ~aA~vIQrA~R~yl~~~ 23 (27)
T 2kxw_B 7 VSAIVIQRAYRRYLLKQ 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 48999999999999875
No 167
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=82.68 E-value=0.98 Score=55.80 Aligned_cols=29 Identities=28% Similarity=0.538 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 001972 845 KIRNHIVKLQAHVRGHQVRKQYKKVVWSV 873 (988)
Q Consensus 845 ~~r~~~v~IQa~~Rg~~aRk~y~~l~~sv 873 (988)
.+.+.+++||++||||++||+|+++.+++
T Consensus 766 ~l~~~~~~iQ~~~Rg~l~R~~~~~~r~a~ 794 (795)
T 1w7j_A 766 KLRAACIRIQKTIRGWLMRKKYMRMRRGD 794 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44567999999999999999999986654
No 168
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=75.80 E-value=14 Score=43.65 Aligned_cols=74 Identities=4% Similarity=-0.113 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHhh
Q 001972 912 YEFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 985 (988)
Q Consensus 912 ~~~L~~~rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~~ 985 (988)
.+.++...++.+++.+......|... +..+-+++|++++.+..+.+..+++.+....++++|+..++++++.+.
T Consensus 504 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~ 578 (597)
T 3oja_B 504 SDNLNKVFTHLKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLE 578 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 34455444554555544455555544 333444556655555555555555555555666666666666665554
No 169
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=73.95 E-value=2.5 Score=42.16 Aligned_cols=25 Identities=16% Similarity=0.199 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHH
Q 001972 821 DYLHFAAIKIQQKYRGWKGRKDFLK 845 (988)
Q Consensus 821 ~~~~~AAi~IQ~~~Rg~~~Rk~f~~ 845 (988)
.....||+.||++||.|+.|+.+.+
T Consensus 127 ~~e~~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 127 KHEEVSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccccc
Confidence 3577899999999999999887654
No 170
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=73.61 E-value=9.1 Score=32.89 Aligned_cols=66 Identities=14% Similarity=-0.026 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh--hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHH
Q 001972 913 EFLRIGRKQKFAGVEKALERVKSMV--RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTK 978 (988)
Q Consensus 913 ~~L~~~rkq~e~~~~~a~~rVqs~~--r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk 978 (988)
..|.+-|.|++.-.++....+.+.+ +...++.+..+--.+++.+|.++..+.-.+..|..+|.++|
T Consensus 9 ~il~eiRaQYE~ia~knr~EaE~~y~~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 9 AAMRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4566666676666555555555555 33344444444445556666555555555555555554443
No 171
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=68.27 E-value=6.4 Score=50.03 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 001972 849 HIVKLQAHVRGHQVRKQYKKVVWSVSIVEKAILR 882 (988)
Q Consensus 849 ~~v~IQa~~Rg~~aRk~y~~l~~sv~~lqk~~~r 882 (988)
.++.+|+.+||+++|++|+++.++++.+++..+.
T Consensus 776 ~~~~~iq~~r~~l~r~~~~k~~~~a~~i~~~~r~ 809 (1052)
T 4anj_A 776 HLAELVKRVNHWLICSRWKKVQWCSLSVIKLKNK 809 (1052)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444689999999999998888887765444
No 172
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=63.40 E-value=96 Score=30.78 Aligned_cols=54 Identities=7% Similarity=-0.010 Sum_probs=22.5
Q ss_pred HHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHH----hhhHhHHHHHH
Q 001972 929 ALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGED----SLNGPTKDNLH 982 (988)
Q Consensus 929 a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~----~~l~~lk~~l~ 982 (988)
.-.||+++. .....+..+.++..+.++....+..++.+.+.+. =+|++++..++
T Consensus 95 lq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~eid~~~eLKalQ~~~e 153 (168)
T 3o0z_A 95 LQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLE 153 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 333444443 2333333333333333444444444444444443 45555555444
No 173
>3brd_A LIN-12 and GLP-1 phenotype protein 1, isoform A; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} SCOP: b.1.18.1 b.2.5.8 b.42.7.1 PDB: 2fo1_A 1ttu_A* 3brf_A*
Probab=60.45 E-value=20 Score=41.02 Aligned_cols=67 Identities=18% Similarity=0.359 Sum_probs=51.9
Q ss_pred eEEEEEcccCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCC----CC-------------CceeEEEEEeCCCcc
Q 001972 426 TKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPS----HA-------------AGRVPFYITGSNRLA 488 (988)
Q Consensus 426 tkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pp----h~-------------pG~V~l~Vt~~n~~~ 488 (988)
.-+-|+|..|. .++.|-||+++.-|-+-.+-.|.|..|+ +. |-.||+-+.-.++..
T Consensus 391 ~mlel~G~nF~-------~~l~VWfG~~~aeT~~r~~e~l~c~vP~~s~~~~~~~~w~~~~~~~~~~~vPl~LVr~dGvi 463 (477)
T 3brd_A 391 SRVELHGRDFK-------PNLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLVRDDGVV 463 (477)
T ss_dssp CEEEEEEECCC-------TTEEEEETTEEECEEEEETTEEEEECCCHHHHSCTTTHHHHBCTTTCCBEEEEEEEETTSEE
T ss_pred eEEEEEcccCC-------CCCeEEECCccceeeEEccceeeccCCCHHHhCccccccccccccCCceEeeEEEEecCCEE
Confidence 56788999552 3599999999888888899999999998 33 445999777677776
Q ss_pred cccceeeeeec
Q 001972 489 CSEVREFEYRE 499 (988)
Q Consensus 489 ~Sev~~FeYr~ 499 (988)
-.--..|+|..
T Consensus 464 y~t~~tf~y~p 474 (477)
T 3brd_A 464 YSSGLTFSYKS 474 (477)
T ss_dssp EEEEEEEETTC
T ss_pred EecCceEEecc
Confidence 56666788764
No 174
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=60.28 E-value=27 Score=42.34 Aligned_cols=88 Identities=15% Similarity=0.248 Sum_probs=56.8
Q ss_pred cCceEEEeecCCCccCC-CceEEEEEcccCCCCCCCCCCceEEeeCCc-ccceEEEecCeEEEecCCC------CCc---
Q 001972 407 EQLFSIRDFSPDWAYSG-AETKVLIIGMFLGTKKLSSDTKWGCMFGEI-EVPAEVLTDNVIRCQAPSH------AAG--- 475 (988)
Q Consensus 407 ~q~f~I~d~sP~w~~~~-ggtkVlI~G~f~~~~~~~~~~~~~c~FGd~-~Vpae~~~~gvLrC~~Pph------~pG--- 475 (988)
.|=..|+ +.|.--..+ ..+.|++....++.- ...|.|.||+. +.+|.+ ..+.+.|..|+- .+|
T Consensus 526 ~qC~~i~-~~P~~~s~~~~~~~v~l~v~~lP~l----~~~~~C~fg~~~~~~a~~-~~~~v~C~sP~~~~~p~~p~g~d~ 599 (681)
T 3oky_A 526 SQCMSLE-VHPNSISVSDHSRLLSLVVNDAPNL----SEGIACAFGNLTEVEGQV-SGSQVICISPGPKDVPVIPLDQDW 599 (681)
T ss_dssp GGCCEEE-EESSEEETTSCSCEEEEEEETCCCC----TTCEEEEETTTEEEECEE-ETTEEEEECCCTTTSCCCC--CCE
T ss_pred Cccceee-ecCccccccccccEEEEeccCCCCC----CCCCEEEcCCccccccee-cCCeeEeCCCCHHhCCCCCCCceE
Confidence 3555785 888866654 477888877877542 23599999997 777754 777889987763 335
Q ss_pred -eeEEEEEeCC-CcccccceeeeeecCC
Q 001972 476 -RVPFYITGSN-RLACSEVREFEYREKP 501 (988)
Q Consensus 476 -~V~l~Vt~~n-~~~~Sev~~FeYr~~~ 501 (988)
.|+|++.... +.. --...|.|.+=+
T Consensus 600 ~~v~l~l~~~~~~~~-~~s~~f~FYdCs 626 (681)
T 3oky_A 600 FGLELQLRSKETGKI-FVSTEFKFYNCS 626 (681)
T ss_dssp EEEEEEEEETTTCCE-EEEEEEEEECCC
T ss_pred EEEEEEEEeccCCCc-eeEEeeEEEcCc
Confidence 3567777542 222 123578887653
No 175
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=58.83 E-value=41 Score=39.54 Aligned_cols=60 Identities=2% Similarity=-0.027 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHH
Q 001972 923 FAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 923 e~~~~~a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
+...++....++..- .....+++..++...+++.|..+...+.+++.++++++.+.+++.
T Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~ 582 (597)
T 3oja_B 522 LRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKN 582 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333444444444433 445556666777777777777777777888888888888877664
No 176
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=57.06 E-value=22 Score=31.09 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHh
Q 001972 925 GVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 925 ~~~~a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
-+++--.|||.++ .+..++-++..++++-.....+.+...+....|..++..||++..++
T Consensus 7 lleqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~w 67 (81)
T 2jee_A 7 VFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGW 67 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 3456677888888 67777777777777766666666666677777888999999988775
No 177
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.99 E-value=6.6 Score=37.38 Aligned_cols=30 Identities=27% Similarity=0.667 Sum_probs=22.8
Q ss_pred EEEeeccccCccccceeeeeccCCcccEEEEe
Q 001972 100 HCYYAHGEDNENFQRRSYWMLDGQLEHIVLVH 131 (988)
Q Consensus 100 ~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvh 131 (988)
-+|-+|--..-+=.||-||.||.. .|.|.+
T Consensus 11 eGWmVH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (129)
T 2d9z_A 11 EGWMVHYTSRDNLRKRHYWRLDSK--CLTLFQ 40 (129)
T ss_dssp EEEEEEEESSCCCCEEEEEEEESS--CEEEES
T ss_pred cceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 377788655556699999999974 588765
No 178
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=52.99 E-value=46 Score=30.21 Aligned_cols=73 Identities=7% Similarity=-0.032 Sum_probs=56.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHH
Q 001972 910 DEYEFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 910 ~~~~~L~~~rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
+..+.++...++++.+..++-..|.++. |......++.+....+.+++..++..+....+-..++.+|.-.|+
T Consensus 23 drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~kLee~ek~~~~aE~ev~~L~Rriq 96 (101)
T 3u1c_A 23 DRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDSLLFAEENAAKAESEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667677788888888888888888 777888889988888888888888777767777777777766655
No 179
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=43.17 E-value=32 Score=37.33 Aligned_cols=67 Identities=13% Similarity=-0.084 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHHHHH----------HhhhhhhcccCcchHhHHhhhHhHHHHHH
Q 001972 916 RIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKF----------ENFKMCDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 916 ~~~rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~~el----------~~ak~~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
+...++++..+..+...+.... +...|+++|.|++.-+ .+++..+...+.++..++.++..++.+++
T Consensus 68 ~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~~~a~l~~~~a~l~~a~a~l~ 145 (341)
T 3fpp_A 68 ENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLD 145 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555555555555555444 5666777777776433 33444444444445555555555554443
No 180
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=42.20 E-value=21 Score=31.12 Aligned_cols=40 Identities=18% Similarity=0.191 Sum_probs=17.1
Q ss_pred HHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhH
Q 001972 931 ERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGE 970 (988)
Q Consensus 931 ~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L 970 (988)
.|+|+.. |...++++.+.+...+++++.+.+..++++..+
T Consensus 13 ~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l 53 (79)
T 3cvf_A 13 QKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRA 53 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344433 444444444444444444444433333333333
No 181
>3dvk_B Voltage-dependent R-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.30A {Rattus norvegicus} PDB: 3dvm_B
Probab=41.64 E-value=10 Score=25.25 Aligned_cols=17 Identities=35% Similarity=0.487 Sum_probs=13.9
Q ss_pred HHHHHHHHHHhhHHHHH...
Q 001972 825 FAAIKIQQKYRGWKGRK... 841 (988)
Q Consensus 825 ~AAi~IQ~~~Rg~~~Rk... 841 (988)
-|+..||-.||.|+.|+
T Consensus 7 YA~llI~d~~r~~k~r~... 23 (23)
T 3dvk_B 7 YAAMMIMDYYKQSKVKKxxx 26 (26)
T ss_dssp HHHHHHHHHHHHHHHTC...
T ss_pred HHHHHHHHHHHHHhccC...
Confidence 37889999999888764
No 182
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=41.16 E-value=25 Score=30.07 Aligned_cols=50 Identities=12% Similarity=0.049 Sum_probs=32.3
Q ss_pred hhhhcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHh
Q 001972 935 SMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 935 s~~r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
.|=-.++++..+++..+++++....+..++.++.+...+|..|+.+|..|
T Consensus 17 ~mgti~eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 17 GRGSLRDLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33334555555666666666666667777777777777777777777665
No 183
>4fm3_A Uncharacterized hypothetical protein; PF14346 family protein, DUF4398, structural genomics, joint for structural genomics, JCSG; HET: PG4; 2.47A {Pseudomonas aeruginosa}
Probab=40.68 E-value=60 Score=29.39 Aligned_cols=63 Identities=14% Similarity=-0.066 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhcHHHHHHHHHHH--HHHHhhhhhhcccCcchHhHHhhhHhHHHHHH
Q 001972 919 RKQKFAGVEKALERVKSMVRNPEARDQYMRMV--AKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 919 rkq~e~~~~~a~~rVqs~~r~~~AR~qyrrl~--~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
++.++.++.+|-.-|+.- .+..||+-...-. ..|-++|+...+.+..+.+|+..|..||.+|-
T Consensus 31 l~~A~dKl~~A~~Am~~~-~y~~Ar~lAEqAe~DArLAeAka~~~Ka~~~~~el~~~I~~LrqEl~ 95 (98)
T 4fm3_A 31 LKLAQDKYAAAQIAMTAE-SYKKARLLAEQAELDARLAESKVLTQKSKDQLGELDKSLKRLRKQLG 95 (98)
T ss_dssp HHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 445555565555444433 6666765544444 34567888888888899999999999998873
No 184
>1cxz_B Protein (PKN); protein-protein complex, antiparallel coiled-coil, signaling protein; HET: GSP; 2.20A {Homo sapiens} SCOP: a.2.6.1
Probab=40.48 E-value=55 Score=28.95 Aligned_cols=49 Identities=10% Similarity=0.051 Sum_probs=34.9
Q ss_pred hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHhhh
Q 001972 938 RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVA 986 (988)
Q Consensus 938 r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~~~ 986 (988)
+..+.|.=+..|+.....+|...+..+.++......|..|+++|+++=|
T Consensus 36 KElKiKeGaENL~katt~~kk~~~~V~~eL~~sn~kl~~L~~eL~eL~a 84 (86)
T 1cxz_B 36 KELKLKEGAENLRRATTDLGRSLGPVELLLRGSSRRLDLLHQQLQELHA 84 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4444555566666655555666777778888888889999999988754
No 185
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=40.08 E-value=85 Score=28.90 Aligned_cols=47 Identities=9% Similarity=-0.053 Sum_probs=33.3
Q ss_pred hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHh
Q 001972 938 RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 938 r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
+.+.++.|..--+..+..-++.-+++..+++.|..+|..|+.++..|
T Consensus 63 ~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~q~~~l 109 (110)
T 2v4h_A 63 TVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKL 109 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 44445555555555555566667778888999999999999888654
No 186
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=39.82 E-value=24 Score=38.82 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHH
Q 001972 918 GRKQKFAGVEKALERVKSMV-RNPEARDQYMRMV 950 (988)
Q Consensus 918 ~rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~ 950 (988)
...+++..+..+...+.... +...|+++|.|++
T Consensus 71 ~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~ 104 (369)
T 4dk0_A 71 TLNTRKAALASYQAQLVARKTAYDVALSNYQRLS 104 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555554444 5556666666665
No 187
>2f3y_B Voltage-dependent L-type calcium channel alpha- 1C subunit; calmodulin, calmodulin complex, calcium channnel, CAV1.2, IQ domain; 1.45A {Homo sapiens} PDB: 2f3z_B 2vay_B
Probab=38.68 E-value=19 Score=24.51 Aligned_cols=17 Identities=41% Similarity=0.651 Sum_probs=13.4
Q ss_pred HHHHHHHHHhhHHHHHH
Q 001972 826 AAIKIQQKYRGWKGRKD 842 (988)
Q Consensus 826 AAi~IQ~~~Rg~~~Rk~ 842 (988)
|...||-.||.|+.|++
T Consensus 4 at~LIqdyfRkfkkrke 20 (26)
T 2f3y_B 4 ATFLIQEYFRKFKKRKE 20 (26)
T ss_pred hhhhHHHHHHHHHHhHH
Confidence 55678888888888876
No 188
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=37.20 E-value=85 Score=27.35 Aligned_cols=44 Identities=7% Similarity=0.012 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHhhh
Q 001972 943 RDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVA 986 (988)
Q Consensus 943 R~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~~~ 986 (988)
.+++.+.+.+...+..+|...+..+.+|..++..|+++++.|-+
T Consensus 30 ~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~ 73 (81)
T 1wt6_A 30 SREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQA 73 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44555666555555566666777788888888888888877543
No 189
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=36.90 E-value=1.8e+02 Score=29.39 Aligned_cols=13 Identities=8% Similarity=-0.140 Sum_probs=5.5
Q ss_pred hHhHHhhhHhHHH
Q 001972 967 SQGEDSLNGPTKD 979 (988)
Q Consensus 967 ~~~L~~~l~~lk~ 979 (988)
+..|+.+|..|++
T Consensus 90 ~~~Lq~el~~l~~ 102 (189)
T 2v71_A 90 VSVLEDDLSQTRA 102 (189)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4444444444433
No 190
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=36.72 E-value=1.2e+02 Score=27.40 Aligned_cols=73 Identities=8% Similarity=0.043 Sum_probs=51.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHH
Q 001972 910 DEYEFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 910 ~~~~~L~~~rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
+..+.++...++++.+..++-..|.++. +......++.+....+..++..++..+.....--.++.+|.-.|+
T Consensus 23 d~ae~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasLnRriq 96 (101)
T 3u59_A 23 DRAEQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQ 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666777777777777777777 666777788877777777777777666666666667777766655
No 191
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=36.30 E-value=92 Score=29.88 Aligned_cols=39 Identities=8% Similarity=-0.016 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHH
Q 001972 945 QYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHA 983 (988)
Q Consensus 945 qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~ 983 (988)
+.-.++.++.+++.+++..+.++.+|+.++..|+.++..
T Consensus 90 E~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~ 128 (138)
T 3hnw_A 90 EIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVK 128 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444445555555555555555555555554443
No 192
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=35.93 E-value=34 Score=28.33 Aligned_cols=46 Identities=11% Similarity=0.018 Sum_probs=25.6
Q ss_pred hcHHHHHHHHHHH-HHHHhhhhhhcccCcchHhHHhhhHhHHHHHHH
Q 001972 938 RNPEARDQYMRMV-AKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHA 983 (988)
Q Consensus 938 r~~~AR~qyrrl~-~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~ 983 (988)
|...|=..||.-+ ....+...+...++.+|.+|+.++..|+.++..
T Consensus 9 rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~ 55 (63)
T 1ci6_A 9 QNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSLAKEIQY 55 (63)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455333 334445555666666677777777666666543
No 193
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=35.67 E-value=60 Score=31.22 Aligned_cols=46 Identities=7% Similarity=-0.161 Sum_probs=33.8
Q ss_pred hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHH
Q 001972 938 RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHA 983 (988)
Q Consensus 938 r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~ 983 (988)
....++.++.....++++++.++++++.++..|+.++..|..++..
T Consensus 90 E~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~~ 135 (138)
T 3hnw_A 90 EIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELND 135 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445567777777777777778888888888888888877766653
No 194
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=35.18 E-value=64 Score=27.60 Aligned_cols=43 Identities=14% Similarity=0.065 Sum_probs=19.7
Q ss_pred HHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHh
Q 001972 930 LERVKSMV-RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDS 972 (988)
Q Consensus 930 ~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~ 972 (988)
..++|+.. |...+.++.+.+...+++++.+.+..++++..+-.
T Consensus 6 ~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~~e 49 (72)
T 3cve_A 6 HMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTLLE 49 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444 44445555555555555544444444444333333
No 195
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=33.43 E-value=27 Score=34.74 Aligned_cols=21 Identities=19% Similarity=0.303 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 001972 848 NHIVKLQAHVRGHQVRKQYKK 868 (988)
Q Consensus 848 ~~~v~IQa~~Rg~~aRk~y~~ 868 (988)
.+|+.||.+||+|+.|+.++.
T Consensus 131 ~aA~~IQra~R~~~~r~~~~~ 151 (168)
T 4dck_A 131 VSAMVIQRAFRRHLLQRSLKH 151 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 389999999999999888765
No 196
>3orj_A Sugar-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.16A {Bacteroides ovatus}
Probab=33.29 E-value=39 Score=38.26 Aligned_cols=69 Identities=10% Similarity=0.084 Sum_probs=50.1
Q ss_pred cCCCceEEEEEcccCCCCCCCCCCceEEeeCCccc--ceEEEecCeEEEecCCC-CCc------eeEEEEEeCCCccccc
Q 001972 421 YSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEV--PAEVLTDNVIRCQAPSH-AAG------RVPFYITGSNRLACSE 491 (988)
Q Consensus 421 ~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd~~V--pae~~~~gvLrC~~Pph-~pG------~V~l~Vt~~n~~~~Se 491 (988)
...-|..|+|.|..|.+ -..|.||++++ ...++.+..|+-..|.- .+| ...++|.-+++..
T Consensus 34 ~a~pGd~ItItGsNL~~-------vtkV~FNdvea~fnstyiTdtsI~VtIPs~aP~G~vd~~VtnkI~VvTdgGt~--- 103 (439)
T 3orj_A 34 FARLGQLIRIEGEGFNG-------LKKVYINGYNCYFNPVFVSNKSFLVSVNSKVPTTEADENVRNTIRLVKDGGEY--- 103 (439)
T ss_dssp EEETTCEEEEEEECCTT-------CCEEEETTEECCBCGGGCCSSEEEEECCTTCCSTTSCTTTTTEEEEEETTEEE---
T ss_pred cccCCCEEEEEeeCCCC-------eeEEEECCEEeeeccccccCCEEEEEcCCCCCCccccccccceEEEEECCCEE---
Confidence 44579999999998754 35899999987 45688999999999987 445 4467777655432
Q ss_pred ceeeeeec
Q 001972 492 VREFEYRE 499 (988)
Q Consensus 492 v~~FeYr~ 499 (988)
...|++..
T Consensus 104 ty~FtVla 111 (439)
T 3orj_A 104 VYDFQIRA 111 (439)
T ss_dssp EEECEEEC
T ss_pred eeeeEEec
Confidence 23566554
No 197
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=33.02 E-value=1.3e+02 Score=34.98 Aligned_cols=25 Identities=8% Similarity=-0.008 Sum_probs=10.4
Q ss_pred HHHHHHhhh-hcHHHHHHHHHHHHHH
Q 001972 929 ALERVKSMV-RNPEARDQYMRMVAKF 953 (988)
Q Consensus 929 a~~rVqs~~-r~~~AR~qyrrl~~el 953 (988)
..++|+..+ +...+|..++.++.++
T Consensus 122 LKekVdnQlsnIrvLQsnLedq~~kI 147 (562)
T 3ghg_A 122 LKRKVIEKVQHIQLLQKNVRAQLVDM 147 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444433 3444444444444443
No 198
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=32.24 E-value=1.3e+02 Score=42.75 Aligned_cols=42 Identities=7% Similarity=0.059 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHhh
Q 001972 944 DQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 985 (988)
Q Consensus 944 ~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~~ 985 (988)
++++.+.+++.++++++.+.+.++.++..+|..||++.++.+
T Consensus 2014 ~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~ 2055 (3245)
T 3vkg_A 2014 EEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLI 2055 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555555555555555555555555555555443
No 199
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=31.62 E-value=62 Score=26.09 Aligned_cols=39 Identities=10% Similarity=-0.199 Sum_probs=22.0
Q ss_pred HHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHh
Q 001972 946 YMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 946 yrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
++..+.++++++..+......+...+.++..++.+++.|
T Consensus 21 ~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~qi~~y 59 (60)
T 3htk_A 21 CSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNEYY 59 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334444555555555555555666666666666666543
No 200
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=31.57 E-value=75 Score=28.41 Aligned_cols=52 Identities=8% Similarity=-0.072 Sum_probs=34.4
Q ss_pred HHHHHHHHHHhhhhcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHH
Q 001972 925 GVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 925 ~~~~a~~rVqs~~r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
.+++..+|+-+| ++|.+.-.++++++-++.+.+-+.+-.+.+|+..+|.-++
T Consensus 56 ~lQqh~aRlnsq------QrQI~ENhkEMKq~aaqsaaLlsk~yh~ene~ar~kkl~~ 107 (114)
T 2xzr_A 56 TLQQHSARLDSQ------QRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKKLIK 107 (114)
T ss_dssp HHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 345566677777 3445555566666666677777777778888887776554
No 201
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=30.59 E-value=30 Score=36.52 Aligned_cols=43 Identities=2% Similarity=-0.045 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHhh
Q 001972 943 RDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYV 985 (988)
Q Consensus 943 R~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~~ 985 (988)
.+.|+.+..++....++.+++..+..+++.||..||++++++-
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~ 95 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLG 95 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3456677777777777777788888888889999999888764
No 202
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=30.38 E-value=97 Score=26.90 Aligned_cols=51 Identities=8% Similarity=-0.070 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhhhhcHHHHHHHHHHHHHHHhhhhh----hcccCcchHhHHhhhHhHHHHHHH
Q 001972 923 FAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMC----DDGSGLLSQGEDSLNGPTKDNLHA 983 (988)
Q Consensus 923 e~~~~~a~~rVqs~~r~~~AR~qyrrl~~el~~ak~~----l~~~~~~~~~L~~~l~~lk~~l~~ 983 (988)
.+.+..+-+.|+++ +++..+|++-+.+ +.+++.+..+|...+.-+|++.+.
T Consensus 17 ~E~~~q~qaEl~sL----------rrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~E 71 (78)
T 3iv1_A 17 KEEMDRAQAELNAL----------KRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEE 71 (78)
T ss_dssp HHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHH----------HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555566665 6666666553333 445666666666666666666554
No 203
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=30.19 E-value=86 Score=35.69 Aligned_cols=26 Identities=0% Similarity=-0.272 Sum_probs=18.1
Q ss_pred hhcccCcchHhHHhhhHhHHHHHHHh
Q 001972 959 CDDGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 959 ~l~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
++++++.++.+|..+|..+..+++++
T Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (471)
T 3mq9_A 444 KVEELEGEITTLNHKLQDASAEVERL 469 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45666777777777777777777654
No 204
>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}
Probab=29.83 E-value=14 Score=31.97 Aligned_cols=8 Identities=75% Similarity=1.527 Sum_probs=7.2
Q ss_pred ccCcccee
Q 001972 70 KDGHRWRK 77 (988)
Q Consensus 70 ~dg~~w~~ 77 (988)
.|||+|||
T Consensus 15 ~DGy~WRK 22 (76)
T 2ayd_A 15 NDGYRWRK 22 (76)
T ss_dssp CCSSCEEE
T ss_pred CCCchhhh
Confidence 59999998
No 205
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=29.61 E-value=5e+02 Score=26.98 Aligned_cols=77 Identities=6% Similarity=-0.054 Sum_probs=35.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhc----ccCcchHhHHhhhHhHHHHHHHh
Q 001972 910 DEYEFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDD----GSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 910 ~~~~~L~~~rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~----~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
.++..|......++.++...-..|..+. +...++.++..+...+.+.+..+. .......+++.++..+..+...+
T Consensus 90 kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~~~~e~~~e~~~l~~~r~~l 169 (256)
T 3na7_A 90 RELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDL 169 (256)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555444444444444444444333 333344444444433333333322 23344555666666666666555
Q ss_pred hh
Q 001972 985 VA 986 (988)
Q Consensus 985 ~~ 986 (988)
++
T Consensus 170 ~~ 171 (256)
T 3na7_A 170 VE 171 (256)
T ss_dssp HH
T ss_pred Hh
Confidence 54
No 206
>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*
Probab=29.57 E-value=14 Score=32.18 Aligned_cols=9 Identities=67% Similarity=1.269 Sum_probs=7.6
Q ss_pred ccCccceec
Q 001972 70 KDGHRWRKK 78 (988)
Q Consensus 70 ~dg~~w~~~ 78 (988)
.|||+|||=
T Consensus 18 dDGy~WRKY 26 (78)
T 1wj2_A 18 DDGYRWRKY 26 (78)
T ss_dssp CSSSCBCCC
T ss_pred CCCchhhhC
Confidence 599999983
No 207
>3bxl_B CAM, voltage-dependent R-type calcium channel subunit alpha-1E peptide; ION channel, calmodulin, IQ domain, facillitation, inactivation; 2.30A {Rattus norvegicus} PDB: 3bxk_B
Probab=29.23 E-value=36 Score=23.23 Aligned_cols=17 Identities=35% Similarity=0.405 Sum_probs=14.7
Q ss_pred HHHHHHHHHhhHHHHHH
Q 001972 826 AAIKIQQKYRGWKGRKD 842 (988)
Q Consensus 826 AAi~IQ~~~Rg~~~Rk~ 842 (988)
||..|+-.||-++.||.
T Consensus 4 Aa~mI~e~yrq~K~~r~ 20 (26)
T 3bxl_B 4 AAMMIMDYYKQSKVKKQ 20 (26)
T ss_pred HHHHHHHHHHHHHhhhh
Confidence 78899999998888876
No 208
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=28.90 E-value=51 Score=26.28 Aligned_cols=18 Identities=0% Similarity=-0.088 Sum_probs=8.0
Q ss_pred chHhHHhhhHhHHHHHHH
Q 001972 966 LSQGEDSLNGPTKDNLHA 983 (988)
Q Consensus 966 ~~~~L~~~l~~lk~~l~~ 983 (988)
...+-+.+|..||+++.+
T Consensus 31 ~L~~AR~el~~Lkeele~ 48 (51)
T 3m91_A 31 TLKEARQQLLALREEVDR 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333344444444444444
No 209
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=28.55 E-value=82 Score=32.96 Aligned_cols=44 Identities=9% Similarity=-0.019 Sum_probs=23.5
Q ss_pred HHHHHHHHHHH----------HHHHhhhhhhcccCcchHhHHhhhHhHHHHHHH
Q 001972 940 PEARDQYMRMV----------AKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHA 983 (988)
Q Consensus 940 ~~AR~qyrrl~----------~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~ 983 (988)
..|+.+|.|.+ .++.+++..+...+.++...+.+|..++.++..
T Consensus 77 ~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~~a~a~l~~a~a~l~~a~~~l~~ 130 (277)
T 2f1m_A 77 NIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAY 130 (277)
T ss_dssp HHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 45566666654 233444444444445555556666666665543
No 210
>2be6_D Voltage-dependent L-type calcium channel alpha-1C; calmodulin, IQ domain, inactivation, facili calcium-dependent, gating, voltage-gated; 2.00A {Homo sapiens}
Probab=28.34 E-value=42 Score=24.78 Aligned_cols=19 Identities=37% Similarity=0.627 Sum_probs=15.7
Q ss_pred HHHHHHHHHHhhHHHHHHH
Q 001972 825 FAAIKIQQKYRGWKGRKDF 843 (988)
Q Consensus 825 ~AAi~IQ~~~Rg~~~Rk~f 843 (988)
-|...||-.||.++.|++-
T Consensus 12 YatfLIQdyFRkfkkrke~ 30 (37)
T 2be6_D 12 YATFLIQEYFRKFKKRKEQ 30 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3678899999999998873
No 211
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=25.74 E-value=3e+02 Score=27.75 Aligned_cols=21 Identities=0% Similarity=-0.279 Sum_probs=8.9
Q ss_pred hcccCcchHhHHhhhHhHHHH
Q 001972 960 DDGSGLLSQGEDSLNGPTKDN 980 (988)
Q Consensus 960 l~~~~~~~~~L~~~l~~lk~~ 980 (988)
...++.++..|+.....++..
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ 110 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKY 110 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444433
No 212
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=25.74 E-value=38 Score=28.13 Aligned_cols=31 Identities=3% Similarity=-0.159 Sum_probs=21.1
Q ss_pred HHHhhhhhhcccCcchHhHHhhhHhHHHHHH
Q 001972 952 KFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 952 el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
.+.+...+.+.++.+|..|..++..|++++.
T Consensus 31 ~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 31 RMKQLEDKVEELLSKNYHLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344555566677888888888888888763
No 213
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=25.34 E-value=1.8e+02 Score=26.53 Aligned_cols=67 Identities=13% Similarity=-0.008 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHhhh
Q 001972 912 YEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAYVA 986 (988)
Q Consensus 912 ~~~L~~~rkq~e~~~~~a~~rVqs~~r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~~~ 986 (988)
.+.|+....+.|.++--|..|++.. .++|.+==. .-.|..+...+.++..|+..|+.||.+|-..||
T Consensus 37 ieeLQ~Ei~~~E~QL~iArQKLkdA------e~~~E~DPD--evNK~tl~~R~~~Vsalq~KiaeLKrqLAd~va 103 (107)
T 2k48_A 37 LQELQENITAHEQQLVTARQKLKDA------EKAVEVDPD--DVNKSTLQNRRAAVSTLETKLGELKRQLADLVA 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------HHHhcCCCc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555566565554443333322 222221111 114555666778888888888888888877765
No 214
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=25.28 E-value=52 Score=27.95 Aligned_cols=24 Identities=8% Similarity=0.033 Sum_probs=17.2
Q ss_pred cccCcchHhHHhhhHhHHHHHHHh
Q 001972 961 DGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 961 ~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
..+..++..|+.+|..|..++..|
T Consensus 46 ~~l~~en~~Lr~~i~~L~~El~~l 69 (70)
T 1gd2_E 46 SSTTLENDQLRQKVRQLEEELRIL 69 (70)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 335677777888888888777765
No 215
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=24.94 E-value=47 Score=23.04 Aligned_cols=13 Identities=8% Similarity=-0.005 Sum_probs=5.3
Q ss_pred hHHhhhHhHHHHH
Q 001972 969 GEDSLNGPTKDNL 981 (988)
Q Consensus 969 ~L~~~l~~lk~~l 981 (988)
.|++|+.+||.++
T Consensus 6 alkqeiaalkkei 18 (33)
T 4dzn_A 6 ALKQEIAALKKEI 18 (33)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444433
No 216
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=24.92 E-value=61 Score=24.24 Aligned_cols=26 Identities=15% Similarity=-0.087 Sum_probs=21.2
Q ss_pred hhcccCcchHhHHhhhHhHHHHHHHh
Q 001972 959 CDDGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 959 ~l~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
++..++++.+.|...|.+||.+++|+
T Consensus 21 elaaleselqalekklaalksklqal 46 (48)
T 1g6u_A 21 ELAALESELQALEKKLAALKSKLQAL 46 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35557788888888999999999886
No 217
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=24.56 E-value=2e+02 Score=34.53 Aligned_cols=66 Identities=26% Similarity=0.278 Sum_probs=49.7
Q ss_pred ceEEEeecCCCccCCCceEEEEEcccCCCCCCCCCCceEEeeCCcccceEEEecCeEEEecCCCCCceeEEEEE
Q 001972 409 LFSIRDFSPDWAYSGAETKVLIIGMFLGTKKLSSDTKWGCMFGEIEVPAEVLTDNVIRCQAPSHAAGRVPFYIT 482 (988)
Q Consensus 409 ~f~I~d~sP~w~~~~ggtkVlI~G~f~~~~~~~~~~~~~c~FGd~~Vpae~~~~gvLrC~~Pph~pG~V~l~Vt 482 (988)
.+.|..+-|.-| ..|..|+|.|.-+.+. .-.+.||..+....-|++|.+.-.+|...+|.+.|.|+
T Consensus 498 ~p~~~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~~~v~ 563 (686)
T 1qho_A 498 APQIGSVAPNMG--IPGNVVTIDGKGFGTT------QGTVTFGGVTATVKSWTSNRIEVYVPNMAAGLTDVKVT 563 (686)
T ss_dssp SCEEEEEESSEE--CTTCEEEEEEECCCSS------CCEEEETTEECCEEEECSSEEEEECCSCCCEEEEEEEE
T ss_pred CCcccccccccc--CCCCEEEEEeecCCCc------ceEEEEecceeeEEEcCCCcEEEecCCCCCCceEEEEe
Confidence 456777766442 2355689999843221 12599999988888899999999999889999999998
No 218
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=23.77 E-value=5.4e+02 Score=25.46 Aligned_cols=15 Identities=0% Similarity=-0.387 Sum_probs=5.6
Q ss_pred cchHhHHhhhHhHHH
Q 001972 965 LLSQGEDSLNGPTKD 979 (988)
Q Consensus 965 ~~~~~L~~~l~~lk~ 979 (988)
.....++..+..+..
T Consensus 160 ~~~~~~~~~~~~l~~ 174 (284)
T 1c1g_A 160 RKYEEVARKLVIIES 174 (284)
T ss_dssp HHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 219
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=23.44 E-value=6.3e+02 Score=26.14 Aligned_cols=52 Identities=8% Similarity=0.114 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHHHHHHhhhhhhcc
Q 001972 911 EYEFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMVAKFENFKMCDDG 962 (988)
Q Consensus 911 ~~~~L~~~rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~~el~~ak~~l~~ 962 (988)
+.++++.....++..+.+...++.... ....+..++..+..++...+..++.
T Consensus 98 Eie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~~~~~~~~~ 150 (256)
T 3na7_A 98 EEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVEN 150 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566556666666666666666555 5555566666666555554444333
No 220
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=23.31 E-value=32 Score=22.85 Aligned_cols=22 Identities=9% Similarity=-0.160 Sum_probs=15.4
Q ss_pred cCcchHhHHhhhHhHHHHHHHh
Q 001972 963 SGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 963 ~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
++.++.+|+.|+.+||++.+.+
T Consensus 5 lkdevgelkgevralkdevkdl 26 (27)
T 3v86_A 5 LKDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhHHHHHHHHHhcc
Confidence 3456777778888888777653
No 221
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=23.19 E-value=8.6e+02 Score=34.95 Aligned_cols=82 Identities=12% Similarity=0.124 Sum_probs=42.5
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcHHHHHHHHHHH-------HHHHhhhhhhcccCcchHhH-------
Q 001972 906 NEKTDEYEFLRIGRKQKFAGVEKALERVKSMV-RNPEARDQYMRMV-------AKFENFKMCDDGSGLLSQGE------- 970 (988)
Q Consensus 906 ~~~~~~~~~L~~~rkq~e~~~~~a~~rVqs~~-r~~~AR~qyrrl~-------~el~~ak~~l~~~~~~~~~L------- 970 (988)
.++.++...++...+.+++++.++..+++... +-..++++|.... .+++.++.+++..+..+..|
T Consensus 2010 ~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~Li~gL~~Ek~RW 2089 (3245)
T 3vkg_A 2010 GPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRW 2089 (3245)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccH
Confidence 34445555555555555555555555555544 4444555554443 33333444444444444444
Q ss_pred HhhhHhHHHHHHHhhhc
Q 001972 971 DSLNGPTKDNLHAYVAD 987 (988)
Q Consensus 971 ~~~l~~lk~~l~~~~~~ 987 (988)
..++..++++++.++.|
T Consensus 2090 ~~~~~~l~~~~~~L~GD 2106 (3245)
T 3vkg_A 2090 EQQSENFNTQMSTVVGD 2106 (3245)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHH
Confidence 44567777777776654
No 222
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=21.79 E-value=82 Score=25.66 Aligned_cols=24 Identities=8% Similarity=-0.050 Sum_probs=11.7
Q ss_pred hhcccCcchHhHHhhhHhHHHHHH
Q 001972 959 CDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 959 ~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
..+.+++++.+|+.++..|++++.
T Consensus 30 ~~~~L~~~n~~L~~~i~~L~~e~~ 53 (61)
T 1t2k_D 30 KAEDLSSLNGQLQSEVTLLRNEVA 53 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444455555555555555443
No 223
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=21.76 E-value=2.1e+02 Score=28.55 Aligned_cols=40 Identities=8% Similarity=0.026 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHH
Q 001972 943 RDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLH 982 (988)
Q Consensus 943 R~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~ 982 (988)
|++.+..+.+++..-..-.-++..+..|..|+..|+.++.
T Consensus 91 r~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL~ 130 (175)
T 3lay_A 91 RQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKLD 130 (175)
T ss_dssp HHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4444444445544332222344444444444444444443
No 224
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=21.54 E-value=2.4e+02 Score=26.10 Aligned_cols=56 Identities=4% Similarity=-0.116 Sum_probs=20.5
Q ss_pred HHHHHhhh-hcHHHHHHHHHHHHHHHhh----hhhhcccCcchHhHHhhhHhHHHHHHHhh
Q 001972 930 LERVKSMV-RNPEARDQYMRMVAKFENF----KMCDDGSGLLSQGEDSLNGPTKDNLHAYV 985 (988)
Q Consensus 930 ~~rVqs~~-r~~~AR~qyrrl~~el~~a----k~~l~~~~~~~~~L~~~l~~lk~~l~~~~ 985 (988)
...|+.+. +...+...+..|+..+.++ ...+.++...-..+..+|..|+.+.+.++
T Consensus 44 k~qV~~L~~~~q~sE~~L~~Lqq~fsq~q~~vq~qL~~Lt~~Re~V~~eL~rLQ~eNd~L~ 104 (112)
T 1x79_B 44 SHQISALVLRAQASEILLEELQQGLSQAKRDVQEQMAVLMQSREQVSEELVRLQKDNDSLQ 104 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Confidence 33444444 4444444455555444332 23344455555556666666666665554
No 225
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=21.52 E-value=1.8e+02 Score=26.32 Aligned_cols=15 Identities=13% Similarity=0.096 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHH
Q 001972 912 YEFLRIGRKQKFAGV 926 (988)
Q Consensus 912 ~~~L~~~rkq~e~~~ 926 (988)
++.++...++++.++
T Consensus 7 ~e~lre~l~~le~~~ 21 (97)
T 2eqb_B 7 YNQLKEDYNTLKREL 21 (97)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 455555555555444
No 226
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=21.46 E-value=79 Score=29.90 Aligned_cols=32 Identities=25% Similarity=0.591 Sum_probs=24.5
Q ss_pred eEEEEeeccccCccccceeeeeccCCcccEEEEe
Q 001972 98 VLHCYYAHGEDNENFQRRSYWMLDGQLEHIVLVH 131 (988)
Q Consensus 98 ~~~~~y~~~~~~~~f~rr~y~~~~~~~~~~vlvh 131 (988)
+--+|-+|--..-+=.||-||.||.. .|.|.+
T Consensus 9 lkeGW~VH~t~~d~~rKRHYWrLD~K--~Itlf~ 40 (125)
T 2coa_A 9 LREGWVVHYSNKDTLRKRHYWRLDCK--CITLFQ 40 (125)
T ss_dssp SEEEEEEECCSSSCCCEEEEEEECSS--EEEEES
T ss_pred eecceEEEEccCCccccceeeEecCC--eEEEEe
Confidence 34578889777777789999999974 577754
No 227
>3dve_B Voltage-dependent N-type calcium channel subunit; calmodulin, IQ domain, inactivation, facili calcium-dependent, voltage-gated; 2.35A {Oryctolagus cuniculus} PDB: 3dvj_B
Probab=21.39 E-value=13 Score=24.74 Aligned_cols=17 Identities=29% Similarity=0.409 Sum_probs=13.4
Q ss_pred HHHHHHHHHHhhHHHHH
Q 001972 825 FAAIKIQQKYRGWKGRK 841 (988)
Q Consensus 825 ~AAi~IQ~~~Rg~~~Rk 841 (988)
-||..||..||.++.||
T Consensus 6 YAallI~d~~r~~k~~~ 22 (23)
T 3dve_B 6 YAALMIFDFYKQNKTSR 22 (26)
T ss_dssp HHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 38889999998887654
No 228
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=21.33 E-value=1.9e+02 Score=27.30 Aligned_cols=23 Identities=9% Similarity=-0.006 Sum_probs=15.4
Q ss_pred hhcccCcchHhHHhhhHhHHHHH
Q 001972 959 CDDGSGLLSQGEDSLNGPTKDNL 981 (988)
Q Consensus 959 ~l~~~~~~~~~L~~~l~~lk~~l 981 (988)
++...+..+.+++.+|..+|.+|
T Consensus 106 Ei~~Rr~fV~~~r~~I~~mk~~l 128 (130)
T 4dnd_A 106 DLQERKVFVERMREAVQEMKDHM 128 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455666777777777777765
No 229
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=21.28 E-value=85 Score=25.83 Aligned_cols=26 Identities=4% Similarity=-0.245 Sum_probs=12.9
Q ss_pred hhhcccCcchHhHHhhhHhHHHHHHH
Q 001972 958 MCDDGSGLLSQGEDSLNGPTKDNLHA 983 (988)
Q Consensus 958 ~~l~~~~~~~~~L~~~l~~lk~~l~~ 983 (988)
.+.+.++.++..|+.+|..|++++..
T Consensus 30 ~~v~~L~~~n~~L~~ei~~L~~e~~~ 55 (63)
T 2wt7_A 30 AETDQLEDEKSALQTEIANLLKEKEK 55 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555555555554443
No 230
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=21.12 E-value=62 Score=29.82 Aligned_cols=68 Identities=13% Similarity=-0.016 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHh
Q 001972 910 DEYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 910 ~~~~~L~~~rkq~e~~~~~a~~rVqs~~r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
++...|+..|+..+.+.-.+..|...+. +-..+-.+....+.+.+.+..++..|+.|+..+|.+.+++
T Consensus 31 ~e~~~lK~~RR~lKNR~yAq~CR~rk~~-------~~~~LE~e~~~L~~e~e~L~~En~~l~~E~~~lk~k~e~L 98 (107)
T 3a5t_A 31 EEIIQLKQRRRTLKNRGYAASCRVKRVT-------QKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEAL 98 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHTTTSSTTTTTTSTTSHHHHTTTSSSSCC---
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666555533333322221 1111112333455667778888888888888877766655
No 231
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=20.78 E-value=2.5e+02 Score=26.27 Aligned_cols=68 Identities=12% Similarity=0.034 Sum_probs=29.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhh--hcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhH
Q 001972 910 DEYEFLRIGRKQKFAGVEKALERVKSMV--RNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPT 977 (988)
Q Consensus 910 ~~~~~L~~~rkq~e~~~~~a~~rVqs~~--r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~l 977 (988)
++.|.+.+.++.--.++..-+.+|..-. .....+.+...|..++.+.+....+...+++.|+.++..+
T Consensus 11 d~rD~~Ie~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l 80 (120)
T 3i00_A 11 DEKDHLIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDEL 80 (120)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555444443333333333332211 2333344444444455444444334444555566555544
No 232
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=20.15 E-value=3.8e+02 Score=23.80 Aligned_cols=67 Identities=9% Similarity=-0.118 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcHHHHHHHHHHHHHHHhhhhhhcccCcchHhHHhhhHhHHHHHHHh
Q 001972 911 EYEFLRIGRKQKFAGVEKALERVKSMVRNPEARDQYMRMVAKFENFKMCDDGSGLLSQGEDSLNGPTKDNLHAY 984 (988)
Q Consensus 911 ~~~~L~~~rkq~e~~~~~a~~rVqs~~r~~~AR~qyrrl~~el~~ak~~l~~~~~~~~~L~~~l~~lk~~l~~~ 984 (988)
+...++..|+..+.+.=.+..|.....+...+..+ ...-+.+.+.+..++..+..++..+|...+++
T Consensus 22 ev~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e-------~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 22 EVIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENE-------KTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455655666555553444444333222222222 22233344445566667777777777777665
Done!