Query 001973
Match_columns 988
No_of_seqs 636 out of 5271
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 06:56:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001973.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001973hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dqq_A Putative tRNA synthase; 100.0 2E-79 6.9E-84 704.1 31.6 407 477-916 2-420 (421)
2 1yzy_A Hypothetical protein HI 100.0 5.5E-79 1.9E-83 699.6 31.4 401 479-916 1-413 (413)
3 3obb_A Probable 3-hydroxyisobu 100.0 3.2E-50 1.1E-54 443.6 32.1 290 146-438 3-299 (300)
4 4gbj_A 6-phosphogluconate dehy 100.0 1.6E-48 5.4E-53 430.5 26.9 290 147-440 6-296 (297)
5 3doj_A AT3G25530, dehydrogenas 100.0 3.8E-42 1.3E-46 383.2 31.1 288 145-435 20-307 (310)
6 4dll_A 2-hydroxy-3-oxopropiona 100.0 1.6E-41 5.6E-46 379.7 32.1 289 145-438 30-318 (320)
7 3g0o_A 3-hydroxyisobutyrate de 100.0 2.5E-41 8.7E-46 375.6 30.3 288 146-436 7-296 (303)
8 3pdu_A 3-hydroxyisobutyrate de 100.0 2E-41 6.8E-46 373.7 28.4 285 147-434 2-286 (287)
9 3pef_A 6-phosphogluconate dehy 100.0 4.9E-41 1.7E-45 370.5 28.7 285 147-434 2-286 (287)
10 2h78_A Hibadh, 3-hydroxyisobut 100.0 7.6E-40 2.6E-44 363.8 32.5 290 146-438 3-299 (302)
11 3qha_A Putative oxidoreductase 100.0 2.5E-38 8.5E-43 350.1 29.4 269 146-424 15-294 (296)
12 3l6d_A Putative oxidoreductase 100.0 8.6E-39 2.9E-43 355.4 24.0 283 145-436 8-296 (306)
13 1vpd_A Tartronate semialdehyde 100.0 8.2E-36 2.8E-40 330.8 32.1 291 147-440 6-296 (299)
14 3cky_A 2-hydroxymethyl glutara 100.0 2.1E-35 7E-40 327.9 33.5 296 145-443 3-299 (301)
15 1yb4_A Tartronic semialdehyde 100.0 4.9E-35 1.7E-39 323.9 28.3 292 146-441 3-294 (295)
16 4ezb_A Uncharacterized conserv 100.0 2.9E-35 1E-39 328.1 25.0 274 146-437 24-313 (317)
17 2gf2_A Hibadh, 3-hydroxyisobut 100.0 3.1E-34 1.1E-38 317.6 31.0 286 147-435 1-293 (296)
18 4a7p_A UDP-glucose dehydrogena 100.0 2E-34 6.9E-39 332.7 27.4 289 146-467 8-338 (446)
19 2uyy_A N-PAC protein; long-cha 100.0 4.5E-34 1.5E-38 319.4 28.8 287 144-433 28-314 (316)
20 3qsg_A NAD-binding phosphogluc 100.0 1E-34 3.4E-39 323.4 21.8 270 141-423 19-292 (312)
21 2cvz_A Dehydrogenase, 3-hydrox 100.0 3.7E-34 1.3E-38 315.8 26.1 285 147-440 2-287 (289)
22 3gg2_A Sugar dehydrogenase, UD 100.0 4E-33 1.4E-37 324.0 24.2 295 147-479 3-340 (450)
23 4e21_A 6-phosphogluconate dehy 100.0 1.2E-32 4.1E-37 310.4 23.9 280 145-439 21-353 (358)
24 3g79_A NDP-N-acetyl-D-galactos 100.0 2.2E-32 7.5E-37 317.2 22.1 295 145-467 17-369 (478)
25 4gwg_A 6-phosphogluconate dehy 100.0 3.8E-32 1.3E-36 315.7 22.0 266 145-417 3-294 (484)
26 2y0c_A BCEC, UDP-glucose dehyd 100.0 3.9E-30 1.3E-34 301.2 26.8 289 146-467 8-344 (478)
27 2p4q_A 6-phosphogluconate dehy 100.0 1.6E-30 5.4E-35 305.2 22.6 256 147-409 11-290 (497)
28 3pid_A UDP-glucose 6-dehydroge 100.0 5.6E-30 1.9E-34 292.7 26.3 279 145-467 35-348 (432)
29 3ojo_A CAP5O; rossmann fold, c 100.0 5.4E-30 1.9E-34 293.5 20.2 284 147-467 12-331 (431)
30 2q3e_A UDP-glucose 6-dehydroge 100.0 1.3E-29 4.6E-34 297.2 22.8 291 145-467 4-345 (467)
31 2o3j_A UDP-glucose 6-dehydroge 100.0 2.3E-29 7.8E-34 295.6 24.6 290 145-467 8-351 (481)
32 2zyd_A 6-phosphogluconate dehy 100.0 9.2E-30 3.1E-34 298.1 20.8 257 146-409 15-295 (480)
33 1mv8_A GMD, GDP-mannose 6-dehy 100.0 2.7E-28 9.2E-33 284.0 23.7 282 147-467 1-329 (436)
34 3vtf_A UDP-glucose 6-dehydroge 100.0 5.4E-28 1.8E-32 276.0 25.2 288 146-467 21-349 (444)
35 1dlj_A UDP-glucose dehydrogena 100.0 9.1E-28 3.1E-32 276.1 26.4 281 147-467 1-325 (402)
36 2pgd_A 6-phosphogluconate dehy 100.0 3.8E-28 1.3E-32 285.6 23.1 264 147-417 3-292 (482)
37 1i36_A Conserved hypothetical 100.0 2.6E-28 8.8E-33 265.5 19.4 255 147-425 1-258 (264)
38 2iz1_A 6-phosphogluconate dehy 100.0 6.7E-28 2.3E-32 282.9 22.1 257 146-409 5-287 (474)
39 1pgj_A 6PGDH, 6-PGDH, 6-phosph 100.0 2.3E-27 7.8E-32 278.2 22.9 262 147-415 2-292 (478)
40 3k96_A Glycerol-3-phosphate de 99.9 5.5E-25 1.9E-29 248.1 15.7 265 144-414 27-336 (356)
41 2ew2_A 2-dehydropantoate 2-red 99.9 7.1E-22 2.4E-26 220.1 18.1 264 147-419 4-312 (316)
42 1z82_A Glycerol-3-phosphate de 99.9 4.8E-22 1.7E-26 223.6 12.9 266 146-434 14-324 (335)
43 1evy_A Glycerol-3-phosphate de 99.9 4.8E-22 1.6E-26 226.5 10.4 263 147-415 16-331 (366)
44 1zej_A HBD-9, 3-hydroxyacyl-CO 99.8 3.4E-21 1.2E-25 210.2 12.2 190 146-362 12-212 (293)
45 1txg_A Glycerol-3-phosphate de 99.8 2.7E-20 9.4E-25 209.2 18.1 258 147-415 1-320 (335)
46 1yqg_A Pyrroline-5-carboxylate 99.8 2.1E-20 7.2E-25 202.8 16.3 247 147-420 1-259 (263)
47 2izz_A Pyrroline-5-carboxylate 99.8 3.3E-20 1.1E-24 207.3 17.1 264 145-428 21-299 (322)
48 3dtt_A NADP oxidoreductase; st 99.8 6.4E-21 2.2E-25 204.6 10.5 179 146-330 19-232 (245)
49 2ahr_A Putative pyrroline carb 99.8 1.5E-19 5.2E-24 195.6 20.6 246 146-418 3-258 (259)
50 2qyt_A 2-dehydropantoate 2-red 99.8 1E-20 3.4E-25 211.1 9.9 258 145-415 7-313 (317)
51 2dpo_A L-gulonate 3-dehydrogen 99.8 8.8E-20 3E-24 202.2 16.5 253 144-419 4-286 (319)
52 1ks9_A KPA reductase;, 2-dehyd 99.8 1.3E-20 4.6E-25 207.2 9.7 251 147-417 1-289 (291)
53 1yj8_A Glycerol-3-phosphate de 99.8 9.5E-20 3.3E-24 208.1 16.5 257 147-414 22-353 (375)
54 1x0v_A GPD-C, GPDH-C, glycerol 99.8 9.4E-20 3.2E-24 206.6 13.9 259 146-415 8-336 (354)
55 4gbj_A 6-phosphogluconate dehy 99.8 3.5E-19 1.2E-23 196.1 11.9 120 1-120 175-296 (297)
56 3c24_A Putative oxidoreductase 99.8 9.1E-18 3.1E-22 184.4 18.5 201 146-358 11-232 (286)
57 2rcy_A Pyrroline carboxylate r 99.8 6.7E-18 2.3E-22 182.9 15.7 245 146-420 4-261 (262)
58 3d1l_A Putative NADP oxidoredu 99.8 4.3E-18 1.5E-22 184.9 14.2 202 146-361 10-217 (266)
59 3obb_A Probable 3-hydroxyisobu 99.7 3.2E-18 1.1E-22 188.4 12.4 118 1-118 174-299 (300)
60 1bg6_A N-(1-D-carboxylethyl)-L 99.7 6.5E-17 2.2E-21 183.4 23.6 264 146-420 4-333 (359)
61 3mog_A Probable 3-hydroxybutyr 99.7 1.6E-17 5.6E-22 194.0 18.8 191 145-359 4-225 (483)
62 1f0y_A HCDH, L-3-hydroxyacyl-C 99.7 2.3E-17 7.9E-22 182.6 15.9 193 144-359 13-241 (302)
63 3ggo_A Prephenate dehydrogenas 99.7 2.5E-16 8.5E-21 174.7 21.8 173 145-327 32-221 (314)
64 4e12_A Diketoreductase; oxidor 99.7 3E-16 1E-20 171.9 20.1 193 145-359 3-227 (283)
65 3gt0_A Pyrroline-5-carboxylate 99.7 3.3E-16 1.1E-20 168.1 20.1 203 147-364 3-214 (247)
66 3tri_A Pyrroline-5-carboxylate 99.7 2.9E-16 9.8E-21 171.6 18.1 252 146-419 3-268 (280)
67 2g5c_A Prephenate dehydrogenas 99.7 1.1E-15 3.9E-20 167.2 21.9 177 147-333 2-195 (281)
68 3hwr_A 2-dehydropantoate 2-red 99.7 1.1E-15 3.7E-20 170.3 22.0 248 146-418 19-313 (318)
69 3k6j_A Protein F01G10.3, confi 99.7 6.1E-16 2.1E-20 178.0 19.7 188 145-355 53-267 (460)
70 3ghy_A Ketopantoate reductase 99.7 1.2E-15 4E-20 171.4 21.0 254 146-418 3-322 (335)
71 2f1k_A Prephenate dehydrogenas 99.6 6.3E-15 2.2E-19 161.0 21.5 194 147-356 1-210 (279)
72 3i83_A 2-dehydropantoate 2-red 99.6 3.8E-15 1.3E-19 166.1 19.6 249 147-417 3-302 (320)
73 2wtb_A MFP2, fatty acid multif 99.6 2.1E-15 7.2E-20 184.8 18.1 247 146-426 312-588 (725)
74 3hn2_A 2-dehydropantoate 2-red 99.6 1.1E-14 3.9E-19 161.7 22.0 255 147-421 3-307 (312)
75 1wdk_A Fatty oxidation complex 99.6 1.3E-15 4.4E-20 186.6 15.5 186 145-354 313-528 (715)
76 3b1f_A Putative prephenate deh 99.6 7.6E-15 2.6E-19 161.4 19.3 157 146-308 6-179 (290)
77 4fgw_A Glycerol-3-phosphate de 99.6 5.4E-16 1.9E-20 174.5 10.1 259 146-414 34-371 (391)
78 1jay_A Coenzyme F420H2:NADP+ o 99.6 4E-15 1.4E-19 155.7 15.1 173 147-330 1-200 (212)
79 4dll_A 2-hydroxy-3-oxopropiona 99.6 1.5E-15 5.1E-20 169.3 12.6 118 1-118 200-318 (320)
80 3ktd_A Prephenate dehydrogenas 99.6 9.1E-15 3.1E-19 163.1 18.4 172 146-327 8-203 (341)
81 4huj_A Uncharacterized protein 99.6 3.1E-15 1.1E-19 157.5 11.6 167 146-319 23-206 (220)
82 3doj_A AT3G25530, dehydrogenas 99.6 4.7E-15 1.6E-19 164.6 12.0 115 1-115 192-307 (310)
83 1zcj_A Peroxisomal bifunctiona 99.6 2.4E-14 8.3E-19 167.1 18.3 187 146-355 37-250 (463)
84 2h78_A Hibadh, 3-hydroxyisobut 99.6 1.1E-14 3.6E-19 161.2 12.4 118 1-118 174-299 (302)
85 2raf_A Putative dinucleotide-b 99.6 8.2E-15 2.8E-19 153.0 10.8 155 146-328 19-193 (209)
86 2pv7_A T-protein [includes: ch 99.5 1.1E-13 3.7E-18 152.7 19.5 181 147-354 22-205 (298)
87 3pef_A 6-phosphogluconate dehy 99.5 7E-15 2.4E-19 161.4 9.5 114 1-114 172-286 (287)
88 3pdu_A 3-hydroxyisobutyrate de 99.5 1E-14 3.6E-19 160.0 10.9 114 1-114 172-286 (287)
89 3g0o_A 3-hydroxyisobutyrate de 99.5 8.2E-15 2.8E-19 162.2 9.8 116 1-116 180-296 (303)
90 2yjz_A Metalloreductase steap4 99.3 6.8E-16 2.3E-20 159.9 0.0 163 146-321 19-192 (201)
91 2i76_A Hypothetical protein; N 99.5 7.9E-15 2.7E-19 160.0 8.4 189 147-355 3-199 (276)
92 2vns_A Metalloreductase steap3 99.5 1.1E-13 3.7E-18 145.1 15.6 171 146-324 28-207 (215)
93 3g17_A Similar to 2-dehydropan 99.5 3E-14 1E-18 156.9 9.2 246 147-418 3-285 (294)
94 1gvf_A Tagatose-bisphosphate a 99.5 2.1E-14 7.2E-19 153.9 6.7 63 919-981 1-63 (286)
95 3l6d_A Putative oxidoreductase 99.5 3.8E-14 1.3E-18 156.9 8.3 112 5-116 181-296 (306)
96 3q94_A Fructose-bisphosphate a 99.5 3.4E-14 1.2E-18 152.2 6.6 64 918-981 3-67 (288)
97 2isw_A Putative fructose-1,6-b 99.4 6.3E-14 2.1E-18 151.6 7.4 63 919-981 1-63 (323)
98 3n9r_A Fructose-bisphosphate a 99.4 5E-14 1.7E-18 151.6 6.4 64 920-983 1-64 (307)
99 3ego_A Probable 2-dehydropanto 99.4 6.9E-13 2.4E-17 146.8 14.7 245 147-418 3-294 (307)
100 3dfu_A Uncharacterized protein 99.4 9.5E-13 3.3E-17 137.7 14.1 159 144-343 4-163 (232)
101 1rvg_A Fructose-1,6-bisphospha 99.4 8.8E-14 3E-18 149.6 6.0 63 920-982 1-63 (305)
102 3ado_A Lambda-crystallin; L-gu 99.4 4.4E-12 1.5E-16 139.4 16.3 196 145-361 5-231 (319)
103 1np3_A Ketol-acid reductoisome 99.4 6.8E-12 2.3E-16 140.6 16.1 190 147-350 17-223 (338)
104 1vpd_A Tartronate semialdehyde 99.3 4.2E-12 1.5E-16 140.0 12.7 120 1-120 176-296 (299)
105 3cky_A 2-hydroxymethyl glutara 99.3 6.3E-12 2.1E-16 138.7 13.7 122 1-122 175-298 (301)
106 3c7a_A Octopine dehydrogenase; 99.3 4.8E-11 1.6E-15 137.4 21.0 264 147-419 3-364 (404)
107 2cvz_A Dehydrogenase, 3-hydrox 99.3 1.2E-11 4E-16 135.7 11.9 120 1-120 166-287 (289)
108 1yb4_A Tartronic semialdehyde 99.3 1.5E-11 5.1E-16 135.3 12.5 120 1-120 173-293 (295)
109 3qha_A Putative oxidoreductase 99.3 1.1E-11 3.6E-16 136.6 11.2 101 1-104 182-294 (296)
110 3elf_A Fructose-bisphosphate a 99.3 3.9E-12 1.3E-16 139.3 6.8 58 919-976 1-61 (349)
111 2gf2_A Hibadh, 3-hydroxyisobut 99.2 2.6E-11 8.7E-16 133.5 13.1 115 1-115 171-293 (296)
112 3pm6_A Putative fructose-bisph 99.2 5.4E-12 1.9E-16 135.1 6.4 64 921-984 12-75 (306)
113 2i99_A MU-crystallin homolog; 99.2 6.6E-13 2.3E-17 147.2 -4.3 139 144-293 133-284 (312)
114 2uyy_A N-PAC protein; long-cha 99.2 4.8E-11 1.6E-15 132.6 9.6 114 1-114 201-315 (316)
115 3gvx_A Glycerate dehydrogenase 99.1 1.5E-11 5.2E-16 133.7 4.7 105 146-257 122-226 (290)
116 1dos_A Aldolase class II; lyas 99.1 2.6E-11 8.9E-16 133.4 4.8 53 923-975 16-68 (358)
117 4dgs_A Dehydrogenase; structur 99.1 8.8E-11 3E-15 130.5 8.7 105 146-257 171-275 (340)
118 4a7p_A UDP-glucose dehydrogena 99.1 1.3E-09 4.4E-14 125.8 17.5 197 1-244 217-426 (446)
119 3qm3_A Fructose-bisphosphate a 99.1 3.9E-11 1.3E-15 132.0 4.5 53 923-975 19-71 (357)
120 3gg2_A Sugar dehydrogenase, UD 99.1 2.1E-09 7.1E-14 124.7 19.1 197 1-244 213-423 (450)
121 2dc1_A L-aspartate dehydrogena 99.1 1.6E-11 5.6E-16 130.5 1.1 160 147-328 1-167 (236)
122 3gg9_A D-3-phosphoglycerate de 99.1 1.2E-10 4.1E-15 130.3 8.0 117 146-265 160-276 (352)
123 2gcg_A Glyoxylate reductase/hy 99.1 3.3E-10 1.1E-14 126.3 11.5 108 146-256 155-262 (330)
124 3jtm_A Formate dehydrogenase, 99.1 1.7E-10 5.9E-15 128.8 8.7 109 146-256 164-272 (351)
125 4ezb_A Uncharacterized conserv 99.1 1.2E-10 3.9E-15 129.4 7.2 111 1-117 196-313 (317)
126 3hg7_A D-isomer specific 2-hyd 99.1 4.4E-11 1.5E-15 132.0 3.3 117 146-266 140-256 (324)
127 2pi1_A D-lactate dehydrogenase 99.1 1.3E-10 4.5E-15 129.2 7.1 105 147-256 142-246 (334)
128 4g2n_A D-isomer specific 2-hyd 99.0 1.3E-10 4.4E-15 129.4 6.8 107 146-256 173-279 (345)
129 3ba1_A HPPR, hydroxyphenylpyru 99.0 9.8E-11 3.3E-15 130.2 5.4 105 146-257 164-268 (333)
130 1mx3_A CTBP1, C-terminal bindi 99.0 3.1E-10 1E-14 126.8 9.2 109 145-256 167-275 (347)
131 4e5n_A Thermostable phosphite 99.0 1.2E-10 4.1E-15 129.4 5.8 109 146-257 145-253 (330)
132 3evt_A Phosphoglycerate dehydr 99.0 7.4E-11 2.5E-15 130.5 4.0 108 146-257 137-244 (324)
133 1wwk_A Phosphoglycerate dehydr 99.0 5.5E-10 1.9E-14 123.0 10.1 108 146-257 142-249 (307)
134 2ekl_A D-3-phosphoglycerate de 99.0 1.7E-10 5.9E-15 127.4 6.0 107 146-256 142-248 (313)
135 2w2k_A D-mandelate dehydrogena 99.0 3.4E-10 1.2E-14 126.9 8.5 109 146-256 163-272 (348)
136 1gdh_A D-glycerate dehydrogena 99.0 2.5E-10 8.4E-15 126.6 6.8 108 146-256 146-254 (320)
137 2dbq_A Glyoxylate reductase; D 99.0 5E-10 1.7E-14 125.0 9.3 107 146-256 150-256 (334)
138 2g76_A 3-PGDH, D-3-phosphoglyc 99.0 3.5E-10 1.2E-14 125.7 7.9 107 146-256 165-271 (335)
139 3fr7_A Putative ketol-acid red 99.0 3.9E-09 1.3E-13 119.7 15.2 202 147-356 55-283 (525)
140 1qp8_A Formate dehydrogenase; 99.0 2.9E-10 9.9E-15 124.9 5.8 104 146-257 124-227 (303)
141 3pp8_A Glyoxylate/hydroxypyruv 99.0 9.3E-11 3.2E-15 129.2 1.8 107 146-256 139-245 (315)
142 2yq5_A D-isomer specific 2-hyd 99.0 5.2E-10 1.8E-14 124.4 7.7 114 147-266 149-262 (343)
143 4hy3_A Phosphoglycerate oxidor 99.0 7.5E-10 2.6E-14 123.9 8.5 108 146-257 176-283 (365)
144 2nac_A NAD-dependent formate d 99.0 8.3E-10 2.8E-14 124.8 8.5 109 146-256 191-299 (393)
145 2j6i_A Formate dehydrogenase; 98.9 5.5E-10 1.9E-14 125.8 6.9 110 146-257 164-274 (364)
146 1j4a_A D-LDH, D-lactate dehydr 98.9 7.4E-10 2.5E-14 123.5 7.6 106 147-257 147-252 (333)
147 2d0i_A Dehydrogenase; structur 98.9 9.5E-10 3.3E-14 122.6 7.3 106 146-256 146-251 (333)
148 3zwc_A Peroxisomal bifunctiona 98.9 1.1E-08 3.6E-13 124.8 16.8 187 146-355 316-529 (742)
149 1ygy_A PGDH, D-3-phosphoglycer 98.9 1.5E-09 5E-14 128.7 8.8 107 146-256 142-248 (529)
150 1sc6_A PGDH, D-3-phosphoglycer 98.9 7.6E-10 2.6E-14 126.1 4.8 105 146-256 145-249 (404)
151 3qsg_A NAD-binding phosphogluc 98.9 6.6E-10 2.2E-14 123.1 4.1 99 1-104 194-293 (312)
152 2cuk_A Glycerate dehydrogenase 98.9 1.7E-09 5.7E-14 119.4 6.8 101 146-255 144-244 (311)
153 3k5p_A D-3-phosphoglycerate de 98.9 1.3E-09 4.4E-14 123.6 6.0 105 146-256 156-260 (416)
154 3g79_A NDP-N-acetyl-D-galactos 98.9 3.8E-08 1.3E-12 114.2 17.9 198 1-244 236-454 (478)
155 3oet_A Erythronate-4-phosphate 98.8 1.9E-09 6.6E-14 120.7 6.3 104 147-257 120-227 (381)
156 1xdw_A NAD+-dependent (R)-2-hy 98.8 1.5E-09 5.2E-14 120.8 4.4 105 147-257 147-251 (331)
157 1dxy_A D-2-hydroxyisocaproate 98.8 2.2E-09 7.5E-14 119.6 5.2 104 147-256 146-249 (333)
158 2o4c_A Erythronate-4-phosphate 98.8 4.4E-09 1.5E-13 118.2 6.4 113 147-266 117-233 (380)
159 2y0c_A BCEC, UDP-glucose dehyd 98.7 2.4E-07 8.1E-12 108.3 19.3 197 1-244 223-443 (478)
160 2o3j_A UDP-glucose 6-dehydroge 98.7 1.4E-07 4.8E-12 110.5 16.7 198 1-244 228-451 (481)
161 3txv_A Probable tagatose 6-pho 98.7 1E-08 3.5E-13 114.9 6.0 57 919-975 3-60 (450)
162 1y81_A Conserved hypothetical 98.7 3E-08 1E-12 95.7 8.3 104 146-265 14-121 (138)
163 2q3e_A UDP-glucose 6-dehydroge 98.7 8.3E-08 2.8E-12 112.2 13.6 198 1-243 222-446 (467)
164 1mv8_A GMD, GDP-mannose 6-dehy 98.6 4.3E-07 1.5E-11 105.2 17.7 187 1-243 211-423 (436)
165 2fiq_A Putative tagatose 6-pho 98.6 4E-08 1.4E-12 110.3 6.2 61 924-984 1-69 (420)
166 2hk9_A Shikimate dehydrogenase 98.6 5.8E-08 2E-12 105.4 7.2 109 147-266 130-241 (275)
167 1lss_A TRK system potassium up 98.6 7.9E-07 2.7E-11 85.3 14.2 110 146-267 4-122 (140)
168 2d5c_A AROE, shikimate 5-dehyd 98.5 1.4E-07 4.6E-12 101.8 8.8 108 148-266 118-228 (263)
169 2rir_A Dipicolinate synthase, 98.5 1.3E-07 4.5E-12 104.0 8.5 110 146-267 157-268 (300)
170 1hyh_A L-hicdh, L-2-hydroxyiso 98.5 5.7E-07 1.9E-11 99.3 12.9 100 147-252 2-133 (309)
171 1x7d_A Ornithine cyclodeaminas 98.5 7.2E-08 2.4E-12 107.9 5.5 114 145-267 128-250 (350)
172 2duw_A Putative COA-binding pr 98.5 8.9E-08 3E-12 93.3 5.2 102 147-264 14-121 (145)
173 3oj0_A Glutr, glutamyl-tRNA re 98.5 3.4E-07 1.2E-11 89.0 9.0 88 146-241 21-111 (144)
174 3kb6_A D-lactate dehydrogenase 98.5 1.5E-07 5E-12 104.6 7.0 105 147-256 142-246 (334)
175 1dlj_A UDP-glucose dehydrogena 98.4 1.7E-06 5.9E-11 99.0 15.4 172 1-219 205-389 (402)
176 2ewd_A Lactate dehydrogenase,; 98.4 4.5E-07 1.5E-11 100.5 10.1 93 145-242 3-123 (317)
177 3d4o_A Dipicolinate synthase s 98.4 4E-07 1.4E-11 99.7 9.1 92 146-244 155-248 (293)
178 3ic5_A Putative saccharopine d 98.4 7.6E-07 2.6E-11 82.7 9.6 102 146-255 5-114 (118)
179 3c85_A Putative glutathione-re 98.4 6.6E-07 2.3E-11 90.6 9.7 111 146-267 39-159 (183)
180 3uuw_A Putative oxidoreductase 98.4 1.3E-06 4.3E-11 96.4 12.6 106 145-257 5-116 (308)
181 3q2i_A Dehydrogenase; rossmann 98.4 1.3E-06 4.4E-11 98.4 12.0 110 141-257 8-125 (354)
182 3euw_A MYO-inositol dehydrogen 98.3 1.9E-06 6.5E-11 96.6 12.6 106 145-256 3-114 (344)
183 1tlt_A Putative oxidoreductase 98.3 1.9E-06 6.4E-11 95.5 12.2 105 145-256 4-114 (319)
184 1pzg_A LDH, lactate dehydrogen 98.3 1.7E-06 5.9E-11 96.2 11.7 103 145-252 8-143 (331)
185 3llv_A Exopolyphosphatase-rela 98.3 2.5E-06 8.7E-11 82.3 11.5 93 145-241 5-105 (141)
186 1i36_A Conserved hypothetical 98.3 3.9E-07 1.4E-11 98.1 6.1 99 1-106 160-259 (264)
187 3e9m_A Oxidoreductase, GFO/IDH 98.3 2.4E-06 8.2E-11 95.2 12.4 134 145-303 4-147 (330)
188 3e18_A Oxidoreductase; dehydro 98.3 2.8E-06 9.5E-11 95.8 12.5 107 144-257 3-115 (359)
189 3db2_A Putative NADPH-dependen 98.3 2.9E-06 9.8E-11 95.5 12.5 106 145-257 4-116 (354)
190 2hjr_A Malate dehydrogenase; m 98.3 3.3E-06 1.1E-10 93.7 12.7 100 146-251 14-141 (328)
191 3fwz_A Inner membrane protein 98.3 7.7E-06 2.6E-10 78.9 13.4 98 147-249 8-113 (140)
192 1omo_A Alanine dehydrogenase; 98.3 1.2E-06 4.2E-11 97.0 8.2 110 145-267 124-241 (322)
193 1a5z_A L-lactate dehydrogenase 98.3 2.6E-06 9E-11 94.3 10.9 99 147-251 1-126 (319)
194 3rc1_A Sugar 3-ketoreductase; 98.2 3.7E-06 1.3E-10 94.4 11.9 106 144-256 25-138 (350)
195 4hkt_A Inositol 2-dehydrogenas 98.2 4.8E-06 1.6E-10 92.8 12.7 103 146-256 3-112 (331)
196 1guz_A Malate dehydrogenase; o 98.2 4.2E-06 1.4E-10 92.3 11.7 100 147-252 1-129 (310)
197 1v8b_A Adenosylhomocysteinase; 98.2 1.2E-06 4E-11 101.1 7.0 101 145-252 256-357 (479)
198 1t2d_A LDH-P, L-lactate dehydr 98.2 7.2E-06 2.5E-10 90.7 12.7 102 145-252 3-137 (322)
199 3p2y_A Alanine dehydrogenase/p 98.2 1.4E-06 4.8E-11 97.4 6.9 94 146-241 184-303 (381)
200 3d64_A Adenosylhomocysteinase; 98.2 1.7E-06 5.9E-11 100.0 7.7 99 145-250 276-375 (494)
201 2z2v_A Hypothetical protein PH 98.2 1.2E-06 4.1E-11 98.7 6.2 108 146-264 16-129 (365)
202 2egg_A AROE, shikimate 5-dehyd 98.2 1.4E-06 4.7E-11 95.5 6.5 113 146-266 141-262 (297)
203 4dio_A NAD(P) transhydrogenase 98.2 1.8E-06 6.2E-11 97.3 7.3 95 146-241 190-313 (405)
204 3h9u_A Adenosylhomocysteinase; 98.2 2.9E-06 9.9E-11 96.0 8.8 92 146-244 211-302 (436)
205 2ho3_A Oxidoreductase, GFO/IDH 98.2 8.5E-06 2.9E-10 90.5 12.5 131 147-303 2-139 (325)
206 2glx_A 1,5-anhydro-D-fructose 98.2 9.5E-06 3.2E-10 90.3 12.8 103 147-256 1-111 (332)
207 3c1a_A Putative oxidoreductase 98.2 2.3E-06 8E-11 94.6 7.7 104 145-256 9-118 (315)
208 3cea_A MYO-inositol 2-dehydrog 98.1 1.2E-05 4.1E-10 90.0 13.2 106 144-256 6-120 (346)
209 2g1u_A Hypothetical protein TM 98.1 6E-06 2E-10 81.2 9.4 91 146-240 19-118 (155)
210 1xea_A Oxidoreductase, GFO/IDH 98.1 7.5E-06 2.6E-10 90.9 11.1 103 147-256 3-112 (323)
211 3bio_A Oxidoreductase, GFO/IDH 98.1 5.9E-06 2E-10 90.8 10.0 102 144-256 7-115 (304)
212 3ezy_A Dehydrogenase; structur 98.1 8.6E-06 2.9E-10 91.2 11.3 104 147-257 3-114 (344)
213 2hmt_A YUAA protein; RCK, KTN, 98.1 4E-06 1.4E-10 80.7 7.1 68 146-213 6-81 (144)
214 2p2s_A Putative oxidoreductase 98.1 1.1E-05 3.6E-10 90.1 11.5 105 145-256 3-115 (336)
215 3m2t_A Probable dehydrogenase; 98.1 7.2E-06 2.5E-10 92.4 10.2 106 144-256 3-117 (359)
216 1lld_A L-lactate dehydrogenase 98.1 7.6E-06 2.6E-10 90.6 9.9 101 146-252 7-135 (319)
217 2v6b_A L-LDH, L-lactate dehydr 98.1 1.1E-05 3.8E-10 88.6 10.7 95 147-246 1-121 (304)
218 2p4q_A 6-phosphogluconate dehy 98.0 3.5E-06 1.2E-10 98.7 6.3 243 1-440 191-460 (497)
219 3ec7_A Putative dehydrogenase; 98.0 2.9E-05 1E-09 87.3 12.9 105 146-257 23-137 (357)
220 3mz0_A Inositol 2-dehydrogenas 98.0 3.1E-05 1E-09 86.7 13.0 104 147-257 3-116 (344)
221 1ydw_A AX110P-like protein; st 98.0 3.4E-05 1.2E-09 86.9 13.4 112 145-265 5-127 (362)
222 1ur5_A Malate dehydrogenase; o 98.0 3.3E-05 1.1E-09 85.0 12.8 101 147-253 3-131 (309)
223 1y6j_A L-lactate dehydrogenase 98.0 2.2E-05 7.5E-10 86.7 11.5 105 145-254 6-136 (318)
224 3d0o_A L-LDH 1, L-lactate dehy 98.0 3.2E-05 1.1E-09 85.4 12.7 108 141-253 1-135 (317)
225 3hdj_A Probable ornithine cycl 98.0 9.1E-06 3.1E-10 89.4 8.2 97 144-252 119-224 (313)
226 3ojo_A CAP5O; rossmann fold, c 98.0 2.1E-05 7.2E-10 90.0 11.2 181 1-243 216-410 (431)
227 3evn_A Oxidoreductase, GFO/IDH 98.0 1.6E-05 5.3E-10 88.5 9.7 105 145-256 4-116 (329)
228 3phh_A Shikimate dehydrogenase 98.0 3.7E-06 1.3E-10 90.0 4.4 113 146-266 118-230 (269)
229 1h6d_A Precursor form of gluco 98.0 2.1E-05 7E-10 91.0 10.8 106 144-256 81-199 (433)
230 3ce6_A Adenosylhomocysteinase; 97.9 1.8E-05 6E-10 92.0 10.0 93 145-244 273-365 (494)
231 3pqe_A L-LDH, L-lactate dehydr 97.9 2E-05 6.7E-10 87.1 9.8 71 143-213 2-84 (326)
232 3e82_A Putative oxidoreductase 97.9 3.9E-05 1.3E-09 86.6 12.4 104 145-256 6-116 (364)
233 3don_A Shikimate dehydrogenase 97.9 6E-06 2.1E-10 89.0 4.5 110 147-265 118-231 (277)
234 4e21_A 6-phosphogluconate dehy 97.9 6.9E-06 2.4E-10 92.2 5.0 113 1-119 211-353 (358)
235 3ohs_X Trans-1,2-dihydrobenzen 97.9 4.9E-05 1.7E-09 84.6 11.9 103 147-256 3-115 (334)
236 1iuk_A Hypothetical protein TT 97.9 1.2E-05 4.1E-10 77.6 5.8 104 147-265 14-122 (140)
237 1oju_A MDH, malate dehydrogena 97.9 2.4E-05 8.1E-10 85.2 8.7 66 147-213 1-80 (294)
238 3vtf_A UDP-glucose 6-dehydroge 97.9 0.00097 3.3E-08 76.2 22.3 187 1-242 229-429 (444)
239 3btv_A Galactose/lactose metab 97.9 2.1E-05 7.2E-10 91.0 8.8 109 144-256 18-144 (438)
240 3gvi_A Malate dehydrogenase; N 97.9 3.3E-05 1.1E-09 85.2 9.8 68 145-213 6-86 (324)
241 3u62_A Shikimate dehydrogenase 97.9 6.7E-06 2.3E-10 87.6 4.0 91 148-242 110-202 (253)
242 3n58_A Adenosylhomocysteinase; 97.9 2.7E-05 9.1E-10 88.0 9.0 92 145-243 246-337 (464)
243 3kux_A Putative oxidoreductase 97.8 5.7E-05 2E-09 84.7 11.6 104 145-256 6-116 (352)
244 2nvw_A Galactose/lactose metab 97.8 4.7E-05 1.6E-09 89.0 11.2 106 144-256 37-163 (479)
245 2vhw_A Alanine dehydrogenase; 97.8 1.4E-05 4.8E-10 90.6 6.4 94 146-241 168-269 (377)
246 1ldn_A L-lactate dehydrogenase 97.8 6.9E-05 2.4E-09 82.7 11.6 71 143-213 3-85 (316)
247 1u8x_X Maltose-6'-phosphate gl 97.8 4.4E-05 1.5E-09 88.4 10.3 79 135-214 18-114 (472)
248 3p7m_A Malate dehydrogenase; p 97.8 0.0001 3.5E-09 81.2 12.6 68 145-213 4-84 (321)
249 3l4b_C TRKA K+ channel protien 97.8 5.6E-05 1.9E-09 78.6 10.0 70 147-216 1-79 (218)
250 4gwg_A 6-phosphogluconate dehy 97.8 1.5E-05 5.2E-10 92.5 6.1 93 1-93 186-290 (484)
251 3gvp_A Adenosylhomocysteinase 97.8 3.1E-05 1.1E-09 87.3 8.3 93 145-244 219-311 (435)
252 2b0j_A 5,10-methenyltetrahydro 97.8 0.0011 3.7E-08 69.0 18.5 150 189-347 128-279 (358)
253 1leh_A Leucine dehydrogenase; 97.8 1.9E-05 6.6E-10 88.3 6.0 102 145-256 172-275 (364)
254 3qy9_A DHPR, dihydrodipicolina 97.8 0.00011 3.9E-09 77.4 11.6 84 146-244 3-87 (243)
255 1zh8_A Oxidoreductase; TM0312, 97.8 0.0001 3.5E-09 82.3 12.0 109 141-256 13-131 (340)
256 3upl_A Oxidoreductase; rossman 97.8 0.00017 6E-09 82.2 13.8 139 144-308 21-189 (446)
257 3tl2_A Malate dehydrogenase; c 97.8 7E-05 2.4E-09 82.3 10.1 70 143-213 5-89 (315)
258 3v5n_A Oxidoreductase; structu 97.7 0.00014 4.7E-09 83.6 12.8 106 144-256 35-159 (417)
259 1x13_A NAD(P) transhydrogenase 97.7 2.9E-05 1E-09 88.5 6.9 93 146-241 172-293 (401)
260 2d59_A Hypothetical protein PH 97.7 3.6E-05 1.2E-09 74.6 6.6 103 146-264 22-128 (144)
261 3f4l_A Putative oxidoreductase 97.7 3.6E-05 1.2E-09 86.1 7.4 104 147-257 3-115 (345)
262 2ixa_A Alpha-N-acetylgalactosa 97.7 0.00013 4.3E-09 84.7 12.2 106 145-257 19-141 (444)
263 4had_A Probable oxidoreductase 97.7 0.0001 3.5E-09 82.6 10.6 107 143-256 20-135 (350)
264 3dty_A Oxidoreductase, GFO/IDH 97.7 0.00014 4.8E-09 83.0 11.9 105 145-256 11-134 (398)
265 3u3x_A Oxidoreductase; structu 97.7 0.00018 6.1E-09 81.0 12.5 105 145-256 25-137 (361)
266 3moi_A Probable dehydrogenase; 97.7 0.00012 4.1E-09 83.2 11.2 104 147-257 3-114 (387)
267 3fef_A Putative glucosidase LP 97.7 3.3E-05 1.1E-09 88.6 6.5 68 145-213 4-86 (450)
268 2eez_A Alanine dehydrogenase; 97.7 5.4E-05 1.8E-09 85.5 8.1 95 146-242 166-268 (369)
269 1f06_A MESO-diaminopimelate D- 97.7 4.2E-05 1.4E-09 84.6 7.1 99 146-254 3-106 (320)
270 3gdo_A Uncharacterized oxidore 97.7 0.00012 4.1E-09 82.3 10.7 105 145-257 4-115 (358)
271 3pid_A UDP-glucose 6-dehydroge 97.7 0.00035 1.2E-08 79.8 14.3 168 1-219 234-411 (432)
272 2zyd_A 6-phosphogluconate dehy 97.6 2.2E-05 7.7E-10 91.6 4.4 242 1-440 196-463 (480)
273 1ez4_A Lactate dehydrogenase; 97.6 0.00024 8.2E-09 78.3 12.3 70 145-214 4-84 (318)
274 3fi9_A Malate dehydrogenase; s 97.6 0.00019 6.6E-09 79.6 11.3 70 144-213 6-87 (343)
275 3nep_X Malate dehydrogenase; h 97.6 0.00012 4.2E-09 80.2 9.5 68 147-214 1-81 (314)
276 3o8q_A Shikimate 5-dehydrogena 97.6 3.8E-05 1.3E-09 83.1 5.3 112 146-265 126-243 (281)
277 1id1_A Putative potassium chan 97.6 0.00026 8.8E-09 69.2 10.4 92 146-241 3-107 (153)
278 2i6t_A Ubiquitin-conjugating e 97.6 0.00013 4.5E-09 79.7 9.2 91 146-241 14-126 (303)
279 3ulk_A Ketol-acid reductoisome 97.6 0.00023 8E-09 79.4 11.1 89 147-240 38-132 (491)
280 3abi_A Putative uncharacterize 97.5 9.3E-05 3.2E-09 83.5 7.5 103 145-256 15-123 (365)
281 3ldh_A Lactate dehydrogenase; 97.5 0.00014 4.8E-09 80.0 8.6 67 146-213 21-100 (330)
282 1l7d_A Nicotinamide nucleotide 97.5 9E-05 3.1E-09 84.1 7.2 94 146-241 172-295 (384)
283 3fhl_A Putative oxidoreductase 97.5 0.00014 4.9E-09 81.8 8.9 104 144-256 3-114 (362)
284 1p77_A Shikimate 5-dehydrogena 97.5 8.4E-05 2.9E-09 80.2 6.6 112 146-265 119-237 (272)
285 1obb_A Maltase, alpha-glucosid 97.5 0.00012 4.1E-09 84.6 8.0 69 146-214 3-89 (480)
286 2zqz_A L-LDH, L-lactate dehydr 97.5 0.00056 1.9E-08 75.6 12.9 70 145-214 8-88 (326)
287 3vku_A L-LDH, L-lactate dehydr 97.5 0.00025 8.6E-09 78.1 10.0 72 143-214 6-88 (326)
288 2pgd_A 6-phosphogluconate dehy 97.5 0.00011 3.6E-09 86.1 7.4 87 1-87 184-281 (482)
289 2iz1_A 6-phosphogluconate dehy 97.5 8E-05 2.7E-09 86.9 6.3 241 1-440 187-455 (474)
290 1s6y_A 6-phospho-beta-glucosid 97.5 0.00022 7.4E-09 82.2 9.8 69 146-214 7-95 (450)
291 1npy_A Hypothetical shikimate 97.5 7.4E-05 2.5E-09 80.4 5.3 111 147-267 120-236 (271)
292 4fb5_A Probable oxidoreductase 97.5 0.00048 1.6E-08 78.1 12.3 107 143-256 22-143 (393)
293 4gqa_A NAD binding oxidoreduct 97.5 0.00027 9.2E-09 81.0 10.0 106 144-256 24-145 (412)
294 1pgj_A 6PGDH, 6-PGDH, 6-phosph 97.4 0.00013 4.4E-09 85.2 7.2 89 1-89 186-285 (478)
295 1nyt_A Shikimate 5-dehydrogena 97.4 0.00031 1.1E-08 75.7 9.6 93 146-243 119-217 (271)
296 3l9w_A Glutathione-regulated p 97.4 0.00076 2.6E-08 77.0 12.9 100 146-250 4-111 (413)
297 3i23_A Oxidoreductase, GFO/IDH 97.4 0.00038 1.3E-08 77.9 9.9 101 147-256 3-114 (349)
298 4gmf_A Yersiniabactin biosynth 97.4 0.00015 5.2E-09 81.6 6.1 103 146-256 7-117 (372)
299 1ff9_A Saccharopine reductase; 97.3 0.00045 1.6E-08 79.9 10.0 111 146-266 3-122 (450)
300 3oqb_A Oxidoreductase; structu 97.3 0.00057 1.9E-08 77.5 10.6 106 144-256 4-132 (383)
301 4ew6_A D-galactose-1-dehydroge 97.3 0.00045 1.5E-08 76.7 9.4 102 143-257 22-131 (330)
302 1lc0_A Biliverdin reductase A; 97.3 0.0004 1.4E-08 75.8 8.7 108 144-265 5-121 (294)
303 1smk_A Malate dehydrogenase, g 97.3 0.00065 2.2E-08 75.2 10.5 68 146-213 8-87 (326)
304 2xxj_A L-LDH, L-lactate dehydr 97.3 0.00072 2.5E-08 74.2 10.6 101 147-252 1-127 (310)
305 4aj2_A L-lactate dehydrogenase 97.3 0.0006 2.1E-08 75.2 9.7 68 145-213 18-98 (331)
306 1mld_A Malate dehydrogenase; o 97.3 0.00072 2.5E-08 74.3 10.2 67 147-213 1-79 (314)
307 1pjc_A Protein (L-alanine dehy 97.3 0.00046 1.6E-08 77.5 8.8 95 147-242 168-269 (361)
308 2axq_A Saccharopine dehydrogen 97.3 0.00098 3.4E-08 77.3 11.7 111 146-266 23-142 (467)
309 2nu8_A Succinyl-COA ligase [AD 97.2 0.00058 2E-08 74.1 8.9 110 144-264 5-119 (288)
310 2d4a_B Malate dehydrogenase; a 97.2 0.00089 3E-08 73.4 10.3 98 148-251 1-126 (308)
311 1gpj_A Glutamyl-tRNA reductase 97.2 0.00044 1.5E-08 79.0 7.7 70 145-214 166-239 (404)
312 3pwz_A Shikimate dehydrogenase 97.2 0.00045 1.5E-08 74.2 7.2 93 147-243 121-218 (272)
313 1j5p_A Aspartate dehydrogenase 97.1 0.00045 1.5E-08 72.7 6.1 95 146-256 12-110 (253)
314 3mtj_A Homoserine dehydrogenas 97.1 0.0012 4.2E-08 75.5 9.9 109 145-263 9-132 (444)
315 3ond_A Adenosylhomocysteinase; 97.1 0.00095 3.3E-08 76.7 9.0 91 145-242 264-354 (488)
316 1nvm_B Acetaldehyde dehydrogen 97.1 0.00067 2.3E-08 74.4 7.2 91 145-242 3-106 (312)
317 4h3v_A Oxidoreductase domain p 97.1 0.0014 5E-08 74.0 10.2 101 146-253 6-121 (390)
318 3oa2_A WBPB; oxidoreductase, s 97.1 0.0013 4.5E-08 72.5 9.5 104 146-257 3-123 (318)
319 4f3y_A DHPR, dihydrodipicolina 97.0 0.00067 2.3E-08 72.7 6.7 91 146-243 7-107 (272)
320 1b8p_A Protein (malate dehydro 97.0 0.0022 7.6E-08 71.0 11.2 68 145-212 4-93 (329)
321 2aef_A Calcium-gated potassium 97.0 0.0011 3.8E-08 69.5 8.4 90 146-241 9-107 (234)
322 3o9z_A Lipopolysaccaride biosy 97.0 0.0016 5.4E-08 71.7 9.6 104 146-257 3-122 (312)
323 3jyo_A Quinate/shikimate dehyd 97.0 0.0013 4.5E-08 71.1 8.5 95 146-243 127-232 (283)
324 3ijp_A DHPR, dihydrodipicolina 96.9 0.0012 4.2E-08 71.0 7.5 103 144-253 19-133 (288)
325 1oi7_A Succinyl-COA synthetase 96.9 0.0021 7.2E-08 69.6 8.9 110 145-264 6-119 (288)
326 3e8x_A Putative NAD-dependent 96.8 0.0024 8.3E-08 66.7 8.9 68 145-212 20-94 (236)
327 4ina_A Saccharopine dehydrogen 96.8 0.0017 5.9E-08 74.1 8.1 88 147-241 2-108 (405)
328 3ngx_A Bifunctional protein fo 96.8 0.0016 5.5E-08 69.1 7.1 75 145-242 149-224 (276)
329 1dih_A Dihydrodipicolinate red 96.8 0.00054 1.8E-08 73.7 3.3 99 145-250 4-114 (273)
330 1nvt_A Shikimate 5'-dehydrogen 96.8 0.0017 5.8E-08 70.4 7.2 93 146-242 128-232 (287)
331 3ip3_A Oxidoreductase, putativ 96.7 0.0017 5.8E-08 72.2 6.9 103 147-257 3-117 (337)
332 2czc_A Glyceraldehyde-3-phosph 96.7 0.0035 1.2E-07 69.5 9.4 72 147-218 3-95 (334)
333 1edz_A 5,10-methylenetetrahydr 96.7 0.00036 1.2E-08 76.2 1.2 89 146-242 177-277 (320)
334 3eag_A UDP-N-acetylmuramate:L- 96.7 0.011 3.7E-07 65.3 13.3 114 146-259 4-135 (326)
335 3ius_A Uncharacterized conserv 96.7 0.0028 9.6E-08 68.2 8.4 65 146-212 5-73 (286)
336 4g65_A TRK system potassium up 96.7 0.002 6.7E-08 74.8 7.5 70 145-214 2-80 (461)
337 1bg6_A N-(1-D-carboxylethyl)-L 96.7 0.0029 9.8E-08 70.7 8.6 96 5-100 229-333 (359)
338 1cf2_P Protein (glyceraldehyde 96.7 0.0023 7.7E-08 71.0 7.3 90 147-243 2-112 (337)
339 2yv1_A Succinyl-COA ligase [AD 96.6 0.0039 1.3E-07 67.7 8.3 109 145-264 12-125 (294)
340 2ozp_A N-acetyl-gamma-glutamyl 96.6 0.0024 8.1E-08 71.1 6.7 88 146-242 4-101 (345)
341 4a26_A Putative C-1-tetrahydro 96.6 0.0026 9.1E-08 68.3 6.7 75 145-242 164-241 (300)
342 3ew7_A LMO0794 protein; Q8Y8U8 96.6 0.008 2.7E-07 61.7 10.3 66 147-213 1-72 (221)
343 2x0j_A Malate dehydrogenase; o 96.6 0.0038 1.3E-07 67.6 8.0 66 147-213 1-80 (294)
344 3fbt_A Chorismate mutase and s 96.6 0.003 1E-07 68.0 7.2 91 147-243 123-217 (282)
345 3qvo_A NMRA family protein; st 96.5 0.0011 3.6E-08 69.7 3.3 67 146-212 23-98 (236)
346 3h2s_A Putative NADH-flavin re 96.5 0.0054 1.8E-07 63.3 8.5 66 147-212 1-72 (224)
347 1o6z_A MDH, malate dehydrogena 96.5 0.01 3.5E-07 64.8 11.0 67 147-213 1-81 (303)
348 1b7g_O Protein (glyceraldehyde 96.5 0.0075 2.6E-07 66.9 9.9 89 147-242 2-110 (340)
349 2yv2_A Succinyl-COA synthetase 96.5 0.0052 1.8E-07 66.8 8.5 111 143-264 10-126 (297)
350 1xyg_A Putative N-acetyl-gamma 96.5 0.0043 1.5E-07 69.4 7.8 89 145-243 15-115 (359)
351 3lk7_A UDP-N-acetylmuramoylala 96.4 0.0064 2.2E-07 70.4 9.4 113 145-257 8-137 (451)
352 1a4i_A Methylenetetrahydrofola 96.4 0.0049 1.7E-07 66.2 7.5 75 146-243 165-240 (301)
353 3do5_A HOM, homoserine dehydro 96.4 0.01 3.5E-07 65.3 10.4 117 146-268 2-143 (327)
354 1p9l_A Dihydrodipicolinate red 96.4 0.023 7.7E-07 59.8 12.4 87 147-255 1-92 (245)
355 3dr3_A N-acetyl-gamma-glutamyl 96.4 0.0023 7.7E-08 70.8 4.8 90 146-242 4-108 (337)
356 1z82_A Glycerol-3-phosphate de 96.3 0.0028 9.6E-08 70.3 5.5 105 2-114 207-324 (335)
357 3hhp_A Malate dehydrogenase; M 96.3 0.0097 3.3E-07 65.1 9.6 67 147-213 1-80 (312)
358 2nqt_A N-acetyl-gamma-glutamyl 96.3 0.0026 8.7E-08 70.9 5.0 90 146-243 9-113 (352)
359 3tnl_A Shikimate dehydrogenase 96.3 0.018 6.1E-07 63.0 11.5 99 146-246 154-269 (315)
360 2c2x_A Methylenetetrahydrofola 96.3 0.0048 1.6E-07 65.6 6.6 75 145-242 157-234 (281)
361 1ys4_A Aspartate-semialdehyde 96.3 0.0045 1.5E-07 69.2 6.7 89 147-242 9-116 (354)
362 3l07_A Bifunctional protein fo 96.3 0.0066 2.2E-07 64.8 7.5 75 145-242 160-235 (285)
363 1b0a_A Protein (fold bifunctio 96.3 0.0048 1.6E-07 65.8 6.4 75 145-242 158-233 (288)
364 1evy_A Glycerol-3-phosphate de 96.2 0.0016 5.4E-08 73.3 2.9 93 2-94 226-330 (366)
365 3c8m_A Homoserine dehydrogenas 96.2 0.0093 3.2E-07 65.9 9.0 105 145-256 5-138 (331)
366 2vt3_A REX, redox-sensing tran 96.2 0.0017 5.9E-08 67.0 2.8 68 147-214 86-157 (215)
367 3r6d_A NAD-dependent epimerase 96.2 0.0074 2.5E-07 62.3 7.6 65 148-212 7-83 (221)
368 1vl6_A Malate oxidoreductase; 96.2 0.013 4.5E-07 65.1 9.8 94 145-245 191-299 (388)
369 4dpl_A Malonyl-COA/succinyl-CO 96.2 0.0028 9.5E-08 70.8 4.4 91 145-242 6-112 (359)
370 4dpk_A Malonyl-COA/succinyl-CO 96.2 0.0028 9.5E-08 70.8 4.4 91 145-242 6-112 (359)
371 3ing_A Homoserine dehydrogenas 96.2 0.0053 1.8E-07 67.5 6.6 120 146-270 4-147 (325)
372 3p2o_A Bifunctional protein fo 96.2 0.0067 2.3E-07 64.7 7.0 75 145-242 159-234 (285)
373 1c1d_A L-phenylalanine dehydro 96.1 0.014 4.6E-07 64.8 9.6 101 146-256 175-276 (355)
374 3dhn_A NAD-dependent epimerase 96.1 0.0057 2E-07 63.2 6.3 66 146-212 4-77 (227)
375 3keo_A Redox-sensing transcrip 96.0 0.0022 7.4E-08 65.8 2.4 67 147-214 85-160 (212)
376 1txg_A Glycerol-3-phosphate de 96.0 0.0087 3E-07 66.1 7.4 89 3-94 214-319 (335)
377 2ep5_A 350AA long hypothetical 96.0 0.0061 2.1E-07 68.0 6.0 90 145-242 3-110 (350)
378 4a5o_A Bifunctional protein fo 96.0 0.01 3.5E-07 63.3 7.4 75 145-242 160-235 (286)
379 2fp4_A Succinyl-COA ligase [GD 95.9 0.015 5.1E-07 63.4 8.6 108 146-264 13-127 (305)
380 1jw9_B Molybdopterin biosynthe 95.8 0.014 4.9E-07 61.7 7.5 33 147-179 32-65 (249)
381 2ejw_A HDH, homoserine dehydro 95.8 0.0026 8.8E-08 70.2 1.7 83 147-238 4-96 (332)
382 1yqg_A Pyrroline-5-carboxylate 95.8 0.0053 1.8E-07 65.4 4.1 84 7-100 171-259 (263)
383 1lnq_A MTHK channels, potassiu 95.7 0.01 3.5E-07 65.8 6.5 68 146-215 115-190 (336)
384 5mdh_A Malate dehydrogenase; o 95.7 0.021 7.2E-07 63.0 8.4 66 146-211 3-88 (333)
385 4h7p_A Malate dehydrogenase; s 95.6 0.034 1.2E-06 61.5 10.1 67 146-212 24-110 (345)
386 1hdo_A Biliverdin IX beta redu 95.6 0.0071 2.4E-07 61.2 4.2 36 147-182 4-40 (206)
387 2hjs_A USG-1 protein homolog; 95.6 0.0043 1.5E-07 68.9 2.5 90 146-243 6-102 (340)
388 3t4e_A Quinate/shikimate dehyd 95.6 0.023 8E-07 62.0 8.2 94 146-243 148-260 (312)
389 2ew2_A 2-dehydropantoate 2-red 95.5 0.0097 3.3E-07 64.9 5.2 88 8-98 220-311 (316)
390 3i6i_A Putative leucoanthocyan 95.5 0.016 5.6E-07 64.2 7.0 67 146-212 10-93 (346)
391 3dfz_A SIRC, precorrin-2 dehyd 95.5 0.056 1.9E-06 55.9 10.4 112 145-256 30-163 (223)
392 2r00_A Aspartate-semialdehyde 95.5 0.0034 1.2E-07 69.5 1.2 90 146-242 3-98 (336)
393 3ff4_A Uncharacterized protein 95.5 0.017 5.8E-07 53.8 5.8 102 146-264 4-109 (122)
394 1u8f_O GAPDH, glyceraldehyde-3 95.5 0.025 8.7E-07 62.4 8.2 90 146-242 3-124 (335)
395 2yyy_A Glyceraldehyde-3-phosph 95.5 0.053 1.8E-06 60.0 10.8 88 147-240 3-113 (343)
396 1y7t_A Malate dehydrogenase; N 95.5 0.016 5.5E-07 63.9 6.6 67 145-211 3-89 (327)
397 1ks9_A KPA reductase;, 2-dehyd 95.4 0.013 4.4E-07 63.2 5.6 81 8-97 202-289 (291)
398 1qyc_A Phenylcoumaran benzylic 95.4 0.021 7.3E-07 61.8 7.2 67 146-212 4-87 (308)
399 2r6j_A Eugenol synthase 1; phe 95.4 0.019 6.6E-07 62.7 6.8 65 147-211 12-88 (318)
400 1qyd_A Pinoresinol-lariciresin 95.2 0.027 9.2E-07 61.2 7.2 66 146-211 4-85 (313)
401 3hsk_A Aspartate-semialdehyde 95.1 0.016 5.4E-07 65.0 5.2 90 146-242 19-126 (381)
402 2wm3_A NMRA-like family domain 95.0 0.029 9.8E-07 60.7 6.8 66 146-211 5-81 (299)
403 3pwk_A Aspartate-semialdehyde 95.0 0.0057 2E-07 68.2 1.1 89 147-242 3-97 (366)
404 3gpi_A NAD-dependent epimerase 94.9 0.019 6.4E-07 61.8 5.0 62 146-211 3-72 (286)
405 7mdh_A Protein (malate dehydro 94.9 0.058 2E-06 60.1 8.9 69 144-212 30-118 (375)
406 3tum_A Shikimate dehydrogenase 94.9 0.027 9.2E-07 60.1 5.9 98 147-244 126-229 (269)
407 3e48_A Putative nucleoside-dip 94.8 0.025 8.4E-07 60.8 5.6 66 147-212 1-75 (289)
408 1vkn_A N-acetyl-gamma-glutamyl 94.8 0.055 1.9E-06 59.8 8.3 88 146-242 13-109 (351)
409 2gas_A Isoflavone reductase; N 94.7 0.034 1.2E-06 60.2 6.5 67 146-212 2-86 (307)
410 3slg_A PBGP3 protein; structur 94.7 0.018 6.1E-07 64.4 4.3 68 143-210 21-99 (372)
411 2ahr_A Putative pyrroline carb 94.7 0.018 6.2E-07 61.1 4.1 83 6-98 171-258 (259)
412 3c1o_A Eugenol synthase; pheny 94.7 0.039 1.3E-06 60.2 6.9 67 146-212 4-87 (321)
413 3dqp_A Oxidoreductase YLBE; al 94.6 0.013 4.6E-07 60.2 2.8 37 147-183 1-38 (219)
414 2dt5_A AT-rich DNA-binding pro 94.6 0.0071 2.4E-07 62.2 0.7 67 147-214 81-152 (211)
415 1up7_A 6-phospho-beta-glucosid 94.6 0.12 4.2E-06 58.6 11.0 69 146-214 2-85 (417)
416 1xgk_A Nitrogen metabolite rep 94.6 0.078 2.7E-06 59.0 9.3 67 146-212 5-83 (352)
417 2x4g_A Nucleoside-diphosphate- 94.6 0.022 7.7E-07 62.7 4.8 41 146-186 13-54 (342)
418 3e5r_O PP38, glyceraldehyde-3- 94.6 0.054 1.8E-06 59.7 7.7 40 147-186 4-47 (337)
419 3u95_A Glycoside hydrolase, fa 94.5 0.054 1.8E-06 62.8 7.8 64 147-210 1-84 (477)
420 1hye_A L-lactate/malate dehydr 94.5 0.086 2.9E-06 57.7 9.1 65 147-211 1-83 (313)
421 4hv4_A UDP-N-acetylmuramate--L 94.5 0.077 2.6E-06 62.0 9.0 115 144-258 20-148 (494)
422 1ebf_A Homoserine dehydrogenas 94.4 0.031 1.1E-06 62.3 5.1 54 146-202 4-64 (358)
423 3rkr_A Short chain oxidoreduct 94.3 0.1 3.6E-06 55.2 9.1 92 141-242 24-116 (262)
424 2qrj_A Saccharopine dehydrogen 94.3 0.019 6.6E-07 64.1 3.3 84 146-242 214-302 (394)
425 4e6p_A Probable sorbitol dehyd 94.2 0.17 5.9E-06 53.4 10.3 84 146-242 8-92 (259)
426 3ruf_A WBGU; rossmann fold, UD 94.0 0.068 2.3E-06 59.0 7.1 36 145-180 24-60 (351)
427 1xq6_A Unknown protein; struct 94.0 0.076 2.6E-06 55.3 7.1 40 146-185 4-46 (253)
428 2jl1_A Triphenylmethane reduct 94.0 0.055 1.9E-06 57.9 5.9 65 147-211 1-75 (287)
429 3m2p_A UDP-N-acetylglucosamine 93.9 0.056 1.9E-06 58.7 6.0 62 147-211 3-71 (311)
430 2qyt_A 2-dehydropantoate 2-red 93.9 0.029 9.9E-07 61.3 3.7 82 9-95 229-313 (317)
431 1y1p_A ARII, aldehyde reductas 93.7 0.12 4.1E-06 56.6 8.4 42 145-186 10-52 (342)
432 1yj8_A Glycerol-3-phosphate de 93.7 0.059 2E-06 60.6 5.7 102 2-113 242-365 (375)
433 3op4_A 3-oxoacyl-[acyl-carrier 93.6 0.24 8.1E-06 52.0 10.0 83 147-242 10-93 (248)
434 3ftp_A 3-oxoacyl-[acyl-carrier 93.6 0.27 9.1E-06 52.4 10.5 85 147-241 28-114 (270)
435 3gem_A Short chain dehydrogena 93.6 0.19 6.3E-06 53.3 9.2 89 137-241 18-108 (260)
436 3cps_A Glyceraldehyde 3-phosph 93.6 0.21 7E-06 55.3 9.6 89 146-241 17-139 (354)
437 4hb9_A Similarities with proba 93.6 0.052 1.8E-06 61.1 5.1 34 147-180 2-35 (412)
438 2d8a_A PH0655, probable L-thre 93.6 0.15 5.2E-06 56.5 8.8 71 147-217 169-251 (348)
439 3hn7_A UDP-N-acetylmuramate-L- 93.5 0.35 1.2E-05 56.8 12.2 112 147-258 20-148 (524)
440 1x0v_A GPD-C, GPDH-C, glycerol 93.5 0.047 1.6E-06 60.7 4.5 91 2-94 225-335 (354)
441 3k96_A Glycerol-3-phosphate de 93.4 0.096 3.3E-06 58.3 6.9 103 1-113 231-348 (356)
442 2bka_A CC3, TAT-interacting pr 93.4 0.036 1.2E-06 57.8 3.1 37 146-182 18-57 (242)
443 1lu9_A Methylene tetrahydromet 93.4 0.12 4.2E-06 55.6 7.5 42 146-187 119-161 (287)
444 3awd_A GOX2181, putative polyo 93.3 0.26 9E-06 51.7 9.9 41 145-185 12-53 (260)
445 3r1i_A Short-chain type dehydr 93.3 0.24 8.2E-06 52.9 9.6 88 145-242 31-119 (276)
446 3uko_A Alcohol dehydrogenase c 93.3 0.36 1.2E-05 54.1 11.4 74 146-219 194-280 (378)
447 1zud_1 Adenylyltransferase THI 93.2 0.15 5.1E-06 53.8 7.7 33 147-179 29-62 (251)
448 2xdo_A TETX2 protein; tetracyc 93.2 0.075 2.6E-06 60.1 5.7 42 139-180 19-60 (398)
449 3ioy_A Short-chain dehydrogena 93.2 0.24 8.3E-06 54.1 9.5 87 145-241 7-96 (319)
450 3nrc_A Enoyl-[acyl-carrier-pro 93.1 0.3 1E-05 52.2 10.0 89 141-243 21-114 (280)
451 2x5o_A UDP-N-acetylmuramoylala 93.1 0.11 3.8E-06 59.7 6.9 64 146-210 5-72 (439)
452 3kkj_A Amine oxidase, flavin-c 93.0 0.073 2.5E-06 55.1 4.9 33 147-179 3-35 (336)
453 1e3i_A Alcohol dehydrogenase, 93.0 0.47 1.6E-05 53.0 11.9 46 146-191 196-242 (376)
454 3ucx_A Short chain dehydrogena 93.0 0.31 1.1E-05 51.5 9.8 83 147-241 12-97 (264)
455 2jhf_A Alcohol dehydrogenase E 93.0 0.52 1.8E-05 52.7 12.1 46 146-191 192-238 (374)
456 1e3j_A NADP(H)-dependent ketos 93.0 0.49 1.7E-05 52.4 11.8 46 146-191 169-214 (352)
457 1t4b_A Aspartate-semialdehyde 93.0 0.048 1.7E-06 60.9 3.5 88 147-242 2-100 (367)
458 4b4o_A Epimerase family protei 92.9 0.051 1.7E-06 58.7 3.6 58 147-210 1-59 (298)
459 3tpc_A Short chain alcohol deh 92.9 0.2 7E-06 52.7 8.2 83 147-242 8-91 (257)
460 1rjw_A ADH-HT, alcohol dehydro 92.9 0.28 9.5E-06 54.1 9.6 46 146-191 165-210 (339)
461 2c5a_A GDP-mannose-3', 5'-epim 92.9 0.06 2.1E-06 60.4 4.2 37 145-181 28-65 (379)
462 1p0f_A NADP-dependent alcohol 92.9 0.5 1.7E-05 52.8 11.7 46 146-191 192-238 (373)
463 4id9_A Short-chain dehydrogena 92.7 0.088 3E-06 58.0 5.2 61 144-210 17-85 (347)
464 2f00_A UDP-N-acetylmuramate--L 92.7 0.17 5.7E-06 59.1 7.7 64 146-210 19-86 (491)
465 3oh8_A Nucleoside-diphosphate 92.7 0.11 3.8E-06 61.0 6.2 64 146-212 147-211 (516)
466 3o38_A Short chain dehydrogena 92.7 0.22 7.7E-06 52.6 8.1 87 145-242 21-111 (266)
467 4eso_A Putative oxidoreductase 92.6 0.33 1.1E-05 51.1 9.3 84 146-242 8-92 (255)
468 3enk_A UDP-glucose 4-epimerase 92.6 0.099 3.4E-06 57.4 5.4 38 145-182 4-42 (341)
469 1cdo_A Alcohol dehydrogenase; 92.6 0.62 2.1E-05 52.0 12.1 46 146-191 193-239 (374)
470 3two_A Mannitol dehydrogenase; 92.6 0.16 5.5E-06 56.3 7.0 89 146-241 177-266 (348)
471 3n74_A 3-ketoacyl-(acyl-carrie 92.5 0.45 1.6E-05 50.0 10.3 83 146-241 9-92 (261)
472 3tz6_A Aspartate-semialdehyde 92.5 0.024 8.2E-07 62.7 0.2 89 147-242 2-96 (344)
473 3qiv_A Short-chain dehydrogena 92.5 0.64 2.2E-05 48.6 11.3 87 146-242 9-96 (253)
474 2a9f_A Putative malic enzyme ( 92.5 0.1 3.6E-06 58.0 5.2 94 145-245 187-294 (398)
475 3lyl_A 3-oxoacyl-(acyl-carrier 92.5 0.39 1.3E-05 50.0 9.6 86 147-242 6-92 (247)
476 3tfo_A Putative 3-oxoacyl-(acy 92.4 0.31 1.1E-05 51.7 8.8 84 147-242 5-91 (264)
477 3h7a_A Short chain dehydrogena 92.4 0.24 8.2E-06 52.1 7.9 41 147-187 8-49 (252)
478 2zcu_A Uncharacterized oxidore 92.4 0.089 3E-06 56.1 4.5 64 148-211 1-74 (286)
479 2fzw_A Alcohol dehydrogenase c 92.4 0.59 2E-05 52.1 11.5 46 146-191 191-237 (373)
480 4ibo_A Gluconate dehydrogenase 92.3 0.27 9.2E-06 52.4 8.3 84 147-242 27-113 (271)
481 3ged_A Short-chain dehydrogena 92.3 0.38 1.3E-05 50.5 9.1 80 148-241 3-84 (247)
482 1xhl_A Short-chain dehydrogena 92.3 0.34 1.2E-05 52.3 9.1 52 135-186 15-67 (297)
483 1pl8_A Human sorbitol dehydrog 92.3 0.51 1.7E-05 52.3 10.8 46 146-191 172-218 (356)
484 3svt_A Short-chain type dehydr 92.3 0.32 1.1E-05 52.0 8.8 86 147-242 12-101 (281)
485 1p3d_A UDP-N-acetylmuramate--a 92.2 0.42 1.4E-05 55.4 10.3 64 146-210 18-85 (475)
486 2gn4_A FLAA1 protein, UDP-GLCN 92.2 0.2 6.8E-06 55.4 7.2 43 145-187 20-65 (344)
487 4fn4_A Short chain dehydrogena 92.1 0.35 1.2E-05 51.1 8.6 84 148-241 8-93 (254)
488 4gx0_A TRKA domain protein; me 92.1 0.53 1.8E-05 55.8 11.3 64 146-209 127-199 (565)
489 1c0p_A D-amino acid oxidase; a 92.1 0.14 4.8E-06 56.8 5.8 36 144-179 4-39 (363)
490 2a4k_A 3-oxoacyl-[acyl carrier 92.0 0.44 1.5E-05 50.4 9.5 83 146-241 6-89 (263)
491 3s2e_A Zinc-containing alcohol 92.0 0.39 1.3E-05 52.9 9.4 46 146-191 167-212 (340)
492 2ydy_A Methionine adenosyltran 92.0 0.17 5.7E-06 54.9 6.2 35 147-181 3-38 (315)
493 3guy_A Short-chain dehydrogena 92.0 0.43 1.5E-05 49.2 9.0 79 148-242 3-82 (230)
494 3grk_A Enoyl-(acyl-carrier-pro 92.0 0.71 2.4E-05 49.6 11.2 88 145-243 30-120 (293)
495 3v8b_A Putative dehydrogenase, 92.0 0.37 1.3E-05 51.6 8.9 86 145-242 27-115 (283)
496 2dvm_A Malic enzyme, 439AA lon 91.9 0.11 3.7E-06 59.2 4.6 89 146-241 186-297 (439)
497 3l6e_A Oxidoreductase, short-c 91.9 0.6 2E-05 48.4 10.1 83 147-242 4-87 (235)
498 3ak4_A NADH-dependent quinucli 91.9 0.72 2.5E-05 48.5 10.9 83 146-241 12-95 (263)
499 4fgs_A Probable dehydrogenase 91.8 0.46 1.6E-05 50.7 9.2 41 147-187 29-71 (273)
500 3k31_A Enoyl-(acyl-carrier-pro 91.8 0.72 2.5E-05 49.7 11.0 88 145-243 29-119 (296)
No 1
>3dqq_A Putative tRNA synthase; structural genomics, unknown function, center for structural genomics of infecti diseases; 2.70A {Salmonella typhimurium} SCOP: c.146.1.1
Probab=100.00 E-value=2e-79 Score=704.06 Aligned_cols=407 Identities=17% Similarity=0.161 Sum_probs=344.9
Q ss_pred CcEEEEecCCCCccccc------ccceeEeecChhhHHHhhccCCcEEEEecCCCCCCHHHHHHHHHHHHHHHHHhcccc
Q 001973 477 AKTLIVLDDDPTGTQTV------HGIEVLTEWSVASLVEQFRKKPLCFFILTNSRALSSEKASSLITDICRNLRTASNSV 550 (988)
Q Consensus 477 ~~~~~iiaDD~TGa~~~------~g~~~~~~~~~~~~~~~~~~~~dvvvi~T~SR~l~~~~A~~~v~~~~~~l~~~~~~~ 550 (988)
|++++|||||||||+|+ +|+++.+.++.+.. ....++|+++|+||||+++|++|++++++++++|++.+++
T Consensus 2 M~~l~vIADDfTGA~D~~~~l~~~G~~t~~~~~~p~~--~~~~~~d~~vi~t~SR~l~~~eA~~~~~~a~~~l~~~~~~- 78 (421)
T 3dqq_A 2 MLKIGVIADDFTGATDIASFLVENGMPTVQINDVPTG--TQPEGCDAVVISLKTRSCPAQEAIKQSLAALVWLKKQGCQ- 78 (421)
T ss_dssp CCCEEEEESSHHHHHHHHHHHHHTTCCEEEEESSCCS--CCCSSCSEEEEECSCSSSCHHHHHHHHHHHHHHHHHTTCS-
T ss_pred CcEEEEEecCcccHHHHHHHHHHCCCcEEEEeCCCCc--cccCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHcCCC-
Confidence 67899999999999998 89999999886421 2234789999999999999999999999999999998875
Q ss_pred CCCeEEEEeccCCCCCCCchhHHHHHHhhhCCCCEEEEeccccCCCeEEECcEEEEecCCceeecCCCccccCCCCCCCC
Q 001973 551 ENTEYTVVLRGDSTLRGHFPEEADAAVSVLGEMDAWIICPFFLQGGRYTIEDIHYVGDLDQLVPAGDTEFAKDASFGFKS 630 (988)
Q Consensus 551 ~~~~~~i~kkiDSTLRGnig~Ei~a~~~~~~~~~~~~v~PAfP~~GR~t~~G~~~v~g~~~~~pl~et~~a~Dp~~Pv~~ 630 (988)
..+|++|||||||||||||+|++|+++++|+ +.++||||||++||||++|+|||+| +||+||+|++||+|||++
T Consensus 79 -~~~~K~cSr~DSTlRGnig~e~dal~~~lg~-~~~vv~PAfP~~GR~t~~G~~~v~g----~pl~et~~a~dp~tP~~~ 152 (421)
T 3dqq_A 79 -QVYFKYCSTFDSTAEGNIGPVTDALMVALDT-SFTVISPALPVNGRTVYQGYLFVMN----HLLAESGMRHHPINPMTD 152 (421)
T ss_dssp -EEEEECCTTCCCBTTBSHHHHHHHHHHHTTC-SCEEEECCBGGGTEEEETTEEEETT----EEGGGSGGGGCSSSCCCC
T ss_pred -EEEEEEecCccCCCCCCcHHHHHHHHHHhCC-CeEEEEcccccCCcEEECCEEEECC----EEcCCCccccCCCCCCCc
Confidence 3566677789999999999999999999997 7999999999999999999999999 999999999999999999
Q ss_pred CcHHHHHHhHcCCCCCCCceeEEehHHHhccChhHHHHHHhccc--CCCeEEEecCChhHHHHHHHHHHHHHHcCCcEEE
Q 001973 631 SNLREWVEEKTSGRIPASSVASISIQLLRKGGPDAVCERLCSLQ--KGSTCIVNAASERDIAVFAAGMIQAELKGKSFLC 708 (988)
Q Consensus 631 s~l~~~l~~q~~~~~~~~~v~~i~l~~v~~~~~~~~~~~l~~~~--~~~i~V~Da~t~~dL~~ia~a~~~~~~~~~~~l~ 708 (988)
|+|+++|++||+++ |++|++++|++ +.+.+.++|.++. +.+++||||+|++||+.|++++. ..+ |+
T Consensus 153 s~l~~~l~~qt~~~-----v~~i~l~~v~~-g~~~~~~~l~~l~~~g~~~vV~DA~~~~DL~~ia~a~~-----~~~-l~ 220 (421)
T 3dqq_A 153 SYLPRLMEAQAQGR-----CGVIPAQTLDE-GVAATRAALSRLQQEGYRYAVLDALNERHLEIQGEVLR-----DAP-LV 220 (421)
T ss_dssp CBHHHHHHTTSSSC-----EEEECHHHHHH-CHHHHHHHHHHHHHTTCSEEEECBSSHHHHHHHHHHHT-----TCS-EE
T ss_pred cHHHHHHHHHhCCC-----EEEEEHHHHhc-cHHHHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHHh-----cCC-EE
Confidence 99999999999874 99999999999 6888999998775 45899999999999999999882 334 67
Q ss_pred EcchHHHHHHhcccccCCCCccccccccCCCceEEEEeccccccHHHHHHHHhhcCCcEEEEEEehhHHHhhchHhHHHH
Q 001973 709 RTAASFVSARIGIVAKAPILPKDLGNKIESTGGLIVVGSYVPKTTKQVEELISQSGRFIRSVEVSVDKVAMKSLEERQEE 788 (988)
Q Consensus 709 vg~agl~~~L~~~~~~~~~~~~~~~~~~~~~~~L~v~GS~s~~T~~Qi~~l~~~~~~~~~~i~~~~~~ll~~~~~~~~~~ 788 (988)
+|++||+.+|++.+...+..+......+..+|+|+||||+|++|++|+++++++ +..+++|+++++++ ...+.+
T Consensus 221 ~G~sGla~aL~~~~~~~~~~~~~~~~~~~~~~~lvv~GS~s~~T~~Ql~~l~~~----~~~i~ld~~~l~~~--~~~~~~ 294 (421)
T 3dqq_A 221 TGGSGLAMGLARQWAKHGVSQARSAGYPLSGRAVVLSGSCSQMTNQQVAFYRQH----APTRDVDVARCLSS--ETREAY 294 (421)
T ss_dssp EESHHHHHHHHHHHHTTCCC--CGGGSCCSSCEEEEECCCSHHHHHHHHHHTTT----SCEEECCGGGSSSH--HHHHHH
T ss_pred EEcHHHHHHHHHHhhhcccccccccccCCCCcEEEEECCCCHHHHHHHHHHHhc----CCEEEeCHHHHhCC--chHHHH
Confidence 999999999987654332211111223456789999999999999999999754 46799999999852 234567
Q ss_pred HHHHHHHHHHHHhcCCcEEEEecCccccc---CCccchHHHHHHHHHHHHHHHHHhhc-CcceeeeccccchHHHHHhhc
Q 001973 789 IIRAAEMVDVFLQARKDTLLITSRVLITG---KTPSESLEINLKVSSAMVEIVRRITT-RPRYILAKGGITSSDIATKAL 864 (988)
Q Consensus 789 ~~~~~~~~~~~l~~~~~~vi~t~~~~~~~---~~~~~~~~~~~~i~~~l~~i~~~~~~-~~~~li~tGGdTs~~v~~~~L 864 (988)
++++.+++.+. .++++++|||++..... .......+++++|++.|++|++++.. ++++||++|||||++++ ++|
T Consensus 295 ~~~~~~~~~~~-~~~~~~lv~ts~~~~~~~~~~~~~~~~~~~~~i~~~l~~i~~~l~~~~~~~livaGGdTs~~v~-~~L 372 (421)
T 3dqq_A 295 AEALAQWVLSQ-DSELAPMISATASTQALAAIQQQYGATEASHAVEALFSLLAARLAEGGITRFIVAGGETSGVVT-QSL 372 (421)
T ss_dssp HHHHHHHHHHC-CCSSCCEEECTTGGGHHHHHSTTCCCCCCCHHHHHHHHHHHHHHHHTTCCEEEEESHHHHHHHH-HHT
T ss_pred HHHHHHHHHhc-CCCCCEEEEECCChhhhHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCCeEEEecCHHHHHHH-HHh
Confidence 77887777665 44456899998754321 11222335688999999999999976 89999999999999996 899
Q ss_pred cccceEEecccccCCcEEEcCCCCCCCCCcEEecCCCCCChhHHHHHHHHhc
Q 001973 865 EAKRAKVVGQALAGVPLWELGPESRHPGVPYVVFPGNVGDNNAVANVVRSWA 916 (988)
Q Consensus 865 g~~~~~~~~ei~pGvp~~~~~~~g~~~gl~ivtK~G~fG~~~~l~~~~~~l~ 916 (988)
|++++++.+||+|||||+++. ++ +++|+|||||||++|+|.+++++|.
T Consensus 373 g~~~l~i~~ei~PGvp~~~~~-~~---~l~vv~K~G~fG~~d~l~~~~~~l~ 420 (421)
T 3dqq_A 373 GITGFHIGPCISPGVPWVNAL-HA---PVSLALKSGNFGDESFFIRAQREFQ 420 (421)
T ss_dssp TCCEEEEEEEEETTEEEEEES-SS---SCEEEEECTTCSCTTHHHHHHHTCC
T ss_pred CCCeeeecccccCCcEEEEEC-CC---CeEEEEecCCCCCHHHHHHHHHHhc
Confidence 999999999999999999997 32 7999999999999999999999873
No 2
>1yzy_A Hypothetical protein HI1011; putative tRNA synthase, structural genomics, PSI, protein structure initiative; 2.10A {Haemophilus influenzae} SCOP: c.146.1.1
Probab=100.00 E-value=5.5e-79 Score=699.59 Aligned_cols=401 Identities=17% Similarity=0.189 Sum_probs=345.9
Q ss_pred EEEEecCCCCccccc------ccceeEeecChhhHHHhhccCCcEEEEecCCCCCCHHHHHHHHHHHHHHHHHhccccCC
Q 001973 479 TLIVLDDDPTGTQTV------HGIEVLTEWSVASLVEQFRKKPLCFFILTNSRALSSEKASSLITDICRNLRTASNSVEN 552 (988)
Q Consensus 479 ~~~iiaDD~TGa~~~------~g~~~~~~~~~~~~~~~~~~~~dvvvi~T~SR~l~~~~A~~~v~~~~~~l~~~~~~~~~ 552 (988)
+++|||||||||+|+ +|+++.+.++.+.. ....++|+++|+||||+++|++|+++++++++++++.+++ .
T Consensus 1 ~l~vIADDfTGA~D~~~~l~~~G~~t~~~~~~~~~--~~~~~~d~vvi~t~SR~l~~~eA~~~~~~~~~~l~~~g~~--~ 76 (413)
T 1yzy_A 1 MLGVIADDFTGASDIASFLVENGLSTVQMNGVPTQ--SLNSKVDAIVISLKSRSNPVNEAIEQSLRAYQWLKENGCT--Q 76 (413)
T ss_dssp -CEEEESSHHHHHHHHHHHHTTTCCEEEEESCCSS--CCCSCCSEEEEECCCSSSCHHHHHHHHHHHHHHHHHTTCC--S
T ss_pred CEEEEecCCccHHHHHHHHHHCCCeEEEEeCCCCc--ccCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhcCCC--e
Confidence 378999999999997 89999999987532 1335789999999999999999999999999999998866 4
Q ss_pred CeEEEEeccCCCCCCCchhHHHHHHhhhCCCCEEEEeccccCCCeEEECcEEEEecCCceeecCCCccccCCCCCCCCCc
Q 001973 553 TEYTVVLRGDSTLRGHFPEEADAAVSVLGEMDAWIICPFFLQGGRYTIEDIHYVGDLDQLVPAGDTEFAKDASFGFKSSN 632 (988)
Q Consensus 553 ~~~~i~kkiDSTLRGnig~Ei~a~~~~~~~~~~~~v~PAfP~~GR~t~~G~~~v~g~~~~~pl~et~~a~Dp~~Pv~~s~ 632 (988)
.+|+||||||||||||||+|++|+++++|+ +.++||||||++||||++|+|||+| +|++||+|++||+|||++|+
T Consensus 77 ~~~k~csr~DSTlRGnig~e~dal~~~~g~-~~~iv~PAfP~~GR~t~~G~~~v~~----~pl~et~~a~dp~tP~~~s~ 151 (413)
T 1yzy_A 77 FYFKYCSTFDSTAKGNIGPVTDALLDELNE-DFTVITPALPVNGRTIFNGYLFVGD----VLLSESGMKNHPITPMVDAN 151 (413)
T ss_dssp EEEECCTTCCCCTTCTHHHHHHHHHHHHTC-CCEEECCCBGGGTEEEETTEEEETT----EEGGGSGGGGCSSSCCCCCB
T ss_pred eEEEEecCccCCCCCChHHHHHHHHHHhCC-CcEEEEccccCCCCEEECCEEEECC----EEcCCCccccCCCCCCCchH
Confidence 677888999999999999999999999996 7999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHhHcCCCCCCCceeEEehHHHhccChhHHHHHHhccc--CCCeEEEecCChhHHHHHHHHHHHHHHcCCcEEEEc
Q 001973 633 LREWVEEKTSGRIPASSVASISIQLLRKGGPDAVCERLCSLQ--KGSTCIVNAASERDIAVFAAGMIQAELKGKSFLCRT 710 (988)
Q Consensus 633 l~~~l~~q~~~~~~~~~v~~i~l~~v~~~~~~~~~~~l~~~~--~~~i~V~Da~t~~dL~~ia~a~~~~~~~~~~~l~vg 710 (988)
|+++|++|++. +|.+|+++++++ +.+++.++|.++. +.+++||||+|++||+.|++++ .+. .||+|
T Consensus 152 l~~~l~~qt~~-----~v~~i~l~~v~~-g~~~~~~~l~~~~~~g~~~vV~DA~t~~DL~~ia~a~-----~~~-~l~~g 219 (413)
T 1yzy_A 152 LMRLMDAQAKG-----KTGLVAYADVIK-GASRVQECFAELKAQGYRYAVVDAVDNSQLEVLAEAV-----ADF-KLVTG 219 (413)
T ss_dssp HHHHHHHHCSS-----CEEEECHHHHTT-CHHHHHHHHHHHHHTTCSEEEECBSSTHHHHHHHHHT-----TTC-SEEEE
T ss_pred HHHHHHHHhCC-----CEEEEEHHHHhC-CHHHHHHHHHHHHhcCCcEEEEeCCCHHHHHHHHHHH-----cCC-cEEEe
Confidence 99999999987 499999999997 7788989988764 3579999999999999999988 234 47899
Q ss_pred chHHHHHHhcccccCCCCccccccccCCCceEEEEeccccccHHHHHHHHhhcCCcEEEEEEehhHHHhhchHhHHHHHH
Q 001973 711 AASFVSARIGIVAKAPILPKDLGNKIESTGGLIVVGSYVPKTTKQVEELISQSGRFIRSVEVSVDKVAMKSLEERQEEII 790 (988)
Q Consensus 711 ~agl~~~L~~~~~~~~~~~~~~~~~~~~~~~L~v~GS~s~~T~~Qi~~l~~~~~~~~~~i~~~~~~ll~~~~~~~~~~~~ 790 (988)
++||+.+|++.+. .+. +.....+...+|+|+||||+|++|++|+++++++ +..+++|++++++. .++++
T Consensus 220 ~sGla~~La~~~~-~~~-~~~~~~~~~~~~~lvv~GS~s~~T~~Ql~~l~~~----~~~i~ld~~~~~~~-----~~~~~ 288 (413)
T 1yzy_A 220 GSGLGAYMAARLS-GGK-KGTNAFTPTKGKTVVLSGSCSVMTNKQVEKYREK----APHFQLDVEQAIHN-----ENYIE 288 (413)
T ss_dssp SHHHHHHHHHHHH-TSC-CGGGCCCCCSCCEEEEECCCSHHHHHHHHHHTTT----SCEEECCHHHHHHC-----TTHHH
T ss_pred CHHHHHHHHHHhc-cCC-cccccccCCCCcEEEEEecCcHHHHHHHHHHHhh----CCEEEEcHHHhcCC-----hHHHH
Confidence 9999999987553 222 1110112335799999999999999999999865 46799999998742 24577
Q ss_pred HHHHHHHHHHhcCCcEEEEecCcccc--c-CCccchHHHHHHHHHHHHHHHHHhhc-CcceeeeccccchHHHHHhhccc
Q 001973 791 RAAEMVDVFLQARKDTLLITSRVLIT--G-KTPSESLEINLKVSSAMVEIVRRITT-RPRYILAKGGITSSDIATKALEA 866 (988)
Q Consensus 791 ~~~~~~~~~l~~~~~~vi~t~~~~~~--~-~~~~~~~~~~~~i~~~l~~i~~~~~~-~~~~li~tGGdTs~~v~~~~Lg~ 866 (988)
++++++.+.+.++++++|||++.... . .......+++++|++.|+++++++.. ++++||++|||||++++ ++||+
T Consensus 289 ~~~~~~~~~l~~~~~~lv~ts~~~~~~~~~~~~~g~~~~~~~I~~~la~i~~~l~~~~~~~livaGGdTs~~v~-~~Lg~ 367 (413)
T 1yzy_A 289 QLYQWVIANLDSEFAPMVYATVPPDALKAIQHQFGVDQASHAIENTFAKLAAKLKQYGVTNFITAGGETSSIVV-QELGF 367 (413)
T ss_dssp HHHHHHHTTTTSSSCCEEECCCCHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEESHHHHHHHH-HHHTC
T ss_pred HHHHHHHHHHhCCCCEEEEECCchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhccCCeEEEecCHHHHHHH-HHcCC
Confidence 88888888888999999999885421 1 11123678899999999999999984 89999999999999995 89999
Q ss_pred cceEEecccccCCcEEEcCCCCCCCCCcEEecCCCCCChhHHHHHHHHhc
Q 001973 867 KRAKVVGQALAGVPLWELGPESRHPGVPYVVFPGNVGDNNAVANVVRSWA 916 (988)
Q Consensus 867 ~~~~~~~ei~pGvp~~~~~~~g~~~gl~ivtK~G~fG~~~~l~~~~~~l~ 916 (988)
+++++.+||+||||||++. ++ +++|+||||+||++|+|.+++++|.
T Consensus 368 ~~l~i~~ei~PGvp~~~~~-~~---~l~vv~K~G~fG~~d~l~~~~~~l~ 413 (413)
T 1yzy_A 368 TGFHIGKQIAPGVPWLKAV-EE---DIFLALKSGNFGKEDFFEYAQGMFL 413 (413)
T ss_dssp CEEEEEEEEETTEEEEEES-SS---SCEEEEECTTCSCTTHHHHHHHTTC
T ss_pred CeEEEcCcccCCceEEEEc-CC---CEEEEEecCCCCCHHHHHHHHHHhC
Confidence 9999999999999999997 33 5999999999999999999999873
No 3
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=3.2e-50 Score=443.56 Aligned_cols=290 Identities=27% Similarity=0.477 Sum_probs=277.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
|+||||||+|.||.+||++|.++||+|++|||++++++.+.+.|++.++|+.|+++.||+||+|||++.++++|+++.++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~g 82 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 82 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSS
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchhh
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeE
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKL 305 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v 305 (988)
+.+.+.+|++|||+||++|.+++++++.+.+ +|++|+|+||+|++..+..|++++|+||+++.+++++|+|+.+++++
T Consensus 83 ~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~--~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g~~i 160 (300)
T 3obb_A 83 LLAHIAPGTLVLECSTIAPTSARKIHAAARE--RGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNI 160 (300)
T ss_dssp STTSCCC-CEEEECSCCCHHHHHHHHHHHHT--TTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEE
T ss_pred hhhcCCCCCEEEECCCCCHHHHHHHHHHHHH--cCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHHHHHhCCCE
Confidence 9999999999999999999999999999987 68999999999999999999999999999999999999999999999
Q ss_pred EEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccc-------cccCCCCCC
Q 001973 306 YVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVP-------HMLDNDYTP 378 (988)
Q Consensus 306 ~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~~ 378 (988)
+| +|+.|+++.+|+++|++.+.++.+++|++.++++.|+|++++.++++.+++.||.++.+.| .+..++|.+
T Consensus 161 ~~-~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~ 239 (300)
T 3obb_A 161 FH-AGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSG 239 (300)
T ss_dssp EE-EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCS
T ss_pred EE-eCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccCCc
Confidence 98 5899999999999999999999999999999999999999999999999999999887766 345678999
Q ss_pred CchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhC
Q 001973 379 YSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSG 438 (988)
Q Consensus 379 ~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g 438 (988)
+|+++.+.||++++.+++++.|+++|+.+.+.++|+++.+.|+|++|++++++++++.+|
T Consensus 240 ~f~~~l~~KDl~l~~~~A~~~g~~~p~~~~a~~~~~~a~~~G~g~~D~sal~~~~e~~~G 299 (300)
T 3obb_A 240 GFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQG 299 (300)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC-
T ss_pred cchHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999998766
No 4
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=1.6e-48 Score=430.47 Aligned_cols=290 Identities=17% Similarity=0.309 Sum_probs=272.2
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
.||||||+|+||.+||.+|+++||+|++|||++++++++.+.|+..++|+.|+++.+|+||+|+|++.++++++. ..+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~--~~~ 83 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFS--MEL 83 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSC--HHH
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHH--HHH
Confidence 489999999999999999999999999999999999999999999999999999999999999999999998875 357
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEE
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLY 306 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~ 306 (988)
.+.+.++++|||+||+.|.+++++++.+.+ +|++|+|+||+|++..+..|++++++||+++.+++++++|+.++++++
T Consensus 84 ~~~~~~~~iiid~sT~~p~~~~~~~~~~~~--~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~~g~~i~ 161 (297)
T 4gbj_A 84 VEKLGKDGVHVSMSTISPETSRQLAQVHEW--YGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVENFVKGVF 161 (297)
T ss_dssp HHHHCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCSEEE
T ss_pred HhhcCCCeEEEECCCCChHHHHHHHHHHHh--cCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHHhhCCeE
Confidence 888999999999999999999999999988 689999999999999999999999999999999999999999999999
Q ss_pred EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCC-CchhhHH
Q 001973 307 VIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTP-YSALDIF 385 (988)
Q Consensus 307 ~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-~~~l~~~ 385 (988)
++++++|+++.+|+++|++.+.++.+++|++.++++.|+|+++++++++.+.+.||.++++.+.+..++|.| +|+++.+
T Consensus 162 ~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~ 241 (297)
T 4gbj_A 162 DFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLG 241 (297)
T ss_dssp ECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHH
T ss_pred EecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHH
Confidence 865579999999999999999999999999999999999999999999999999999999999999999987 8999999
Q ss_pred HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhCcc
Q 001973 386 VKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSGVK 440 (988)
Q Consensus 386 ~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~ 440 (988)
.||++++.+++++.|+|+|+.+.+.++|+.+.+.|+|++|++++++++++.+|++
T Consensus 242 ~KDl~l~~~~A~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~sal~~~~~~~aGl~ 296 (297)
T 4gbj_A 242 LKDINLTLQTASDVNAPMPFADIIRNRFISGLAKGRENLDWGALALGASDDAGLT 296 (297)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999975
No 5
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=3.8e-42 Score=383.24 Aligned_cols=288 Identities=25% Similarity=0.399 Sum_probs=276.4
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.+|||+|||+|.||.+||.+|+++||+|++|||++++++.+.+.|+..++++.++++++|+||+|||++.+++.++++++
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~ 99 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKG 99 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCch
Confidence 45799999999999999999999999999999999999999999999999999999999999999999988999998777
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCe
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEK 304 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~ 304 (988)
++.+.+.++++|||+||+.|.+++++.+.+.+ .|.+|+++|+++++..+..|++++++||+++.+++++++|+.+|++
T Consensus 100 ~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~--~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~g~~ 177 (310)
T 3doj_A 100 GVLEQICEGKGYIDMSTVDAETSLKINEAITG--KGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLGKR 177 (310)
T ss_dssp CGGGGCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEE
T ss_pred hhhhccCCCCEEEECCCCCHHHHHHHHHHHHH--cCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhCCC
Confidence 88899999999999999999999999999887 5799999999999999999999999999999999999999999999
Q ss_pred EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhH
Q 001973 305 LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDI 384 (988)
Q Consensus 305 v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~ 384 (988)
+++ +|+.|.++++|+++|++.+.++.+++|++.++++.|+|++++.++++.+++.|+.++++.++++.++|.++|++++
T Consensus 178 ~~~-~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~ 256 (310)
T 3doj_A 178 SFY-LGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKH 256 (310)
T ss_dssp EEE-CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHH
T ss_pred EEE-eCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHHH
Confidence 888 5789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHH
Q 001973 385 FVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYET 435 (988)
Q Consensus 385 ~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~ 435 (988)
+.||++++.+++++.|+++|++++++++|+.+.+.|+|++|++++++++++
T Consensus 257 ~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~ 307 (310)
T 3doj_A 257 QQKDMRLALALGDENAVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVKF 307 (310)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999985
No 6
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=1.6e-41 Score=379.73 Aligned_cols=289 Identities=25% Similarity=0.399 Sum_probs=274.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.+|||+|||+|.||..||.+|+++||+|++|||++++.+++.+.|+..++++.++++++|+||+|||++..++.+++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~- 108 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ- 108 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT-
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch-
Confidence 4579999999999999999999999999999999999999999999999999999999999999999998999999654
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCe
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEK 304 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~ 304 (988)
++.+.+.++++|||+||+.|.+++++.+.+.+ .|++|+++|+++++..+..|++++++||+++.+++++++|+.+ ++
T Consensus 109 ~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~--~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~-~~ 185 (320)
T 4dll_A 109 GVAAAMKPGSLFLDMASITPREARDHAARLGA--LGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVF-GR 185 (320)
T ss_dssp CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH-EE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHH--cCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhc-CC
Confidence 78889999999999999999999999999887 5799999999999999999999999999999999999999999 88
Q ss_pred EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhH
Q 001973 305 LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDI 384 (988)
Q Consensus 305 v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~ 384 (988)
+++ +|+.|.++++|+++|.+.+.++.+++|++.++++.|+|++++.++++.+.+.||.++++.++++.++|.++|++++
T Consensus 186 ~~~-~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~ 264 (320)
T 4dll_A 186 ATH-VGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSI 264 (320)
T ss_dssp EEE-EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHH
T ss_pred EEE-eCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHH
Confidence 887 4789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhC
Q 001973 385 FVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSG 438 (988)
Q Consensus 385 ~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g 438 (988)
+.||++++.+++++.|+++|+++++.++|+.+.+.|+|++|++++++++++.+|
T Consensus 265 ~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~ 318 (320)
T 4dll_A 265 QLKDMRNALATAQEIGFDAPITGLFEQLYAEGVEHGLTDLDQSGLFVELASRNG 318 (320)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTTTTTSBGGGHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999998765
No 7
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=2.5e-41 Score=375.61 Aligned_cols=288 Identities=42% Similarity=0.699 Sum_probs=271.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc-cCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI-ANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
+|||+|||+|.||.+||.+|+++||+|++|||++++++.+.+.|... ++++.++++++|+||+|||++..++.++++.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 47999999999999999999999999999999999999999999887 89999999999999999999988999998777
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCe
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEK 304 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~ 304 (988)
++.+.++++++|||+||+.|.+.+++.+.+.+ .|.+|+++|+++++..+..|++++++||+++.+++++++|+.++++
T Consensus 87 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~--~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~ 164 (303)
T 3g0o_A 87 GVAHLMKPGSAVMVSSTISSADAQEIAAALTA--LNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVASN 164 (303)
T ss_dssp CCGGGSCTTCEEEECSCCCHHHHHHHHHHHHT--TTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHEEE
T ss_pred hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHH--cCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHHHHHHHHHHCCC
Confidence 88899999999999999999999999998877 5789999999999999999999999999999999999999999999
Q ss_pred EEEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhh
Q 001973 305 LYVIKGG-CGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALD 383 (988)
Q Consensus 305 v~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~ 383 (988)
++++ ++ +|.++++|+++|++.++++.+++|++.++++.|+|++++.++++.+.+.||.++++.++++.++|.++|+++
T Consensus 165 ~~~~-~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 243 (303)
T 3g0o_A 165 VYRI-SDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVD 243 (303)
T ss_dssp EEEE-ESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHH
T ss_pred EEEC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCchH
Confidence 9885 55 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHh
Q 001973 384 IFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETL 436 (988)
Q Consensus 384 ~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~ 436 (988)
++.||++++.+++++.|+++|++++++++|+++.+.|+|++|++++++++++.
T Consensus 244 ~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~ 296 (303)
T 3g0o_A 244 IFVKDLGLVADTAKALRFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGE 296 (303)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGC---
T ss_pred HHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988864
No 8
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=2e-41 Score=373.66 Aligned_cols=285 Identities=28% Similarity=0.427 Sum_probs=273.6
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
|||+|||+|+||.+||.+|+++||+|++|||++++.+.+.+.|+..++++.++++++|+||+|||++.+++.++++.+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~l 81 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGV 81 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTCG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchhh
Confidence 68999999999999999999999999999999999999999999999999999999999999999998899999877788
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEE
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLY 306 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~ 306 (988)
.+.+.++++|||+||+.|.+.+++.+.+.+ .+.+|+++|+++++..+..|++++++||+++.+++++++|+.++++++
T Consensus 82 ~~~l~~g~~vv~~st~~~~~~~~~~~~~~~--~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~ 159 (287)
T 3pdu_A 82 LEGIGGGRGYIDMSTVDDETSTAIGAAVTA--RGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALGKKCL 159 (287)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEE
T ss_pred hhcccCCCEEEECCCCCHHHHHHHHHHHHH--cCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCEE
Confidence 899999999999999999999999998887 579999999999999999999999999999999999999999999988
Q ss_pred EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhHHH
Q 001973 307 VIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFV 386 (988)
Q Consensus 307 ~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~ 386 (988)
+ +++.|.++++|+++|++.+.++.+++|++.++++.|+|++++.++++.+.+.||.++++.+++..++|.++|+++++.
T Consensus 160 ~-~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T 3pdu_A 160 H-LGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQ 238 (287)
T ss_dssp E-CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHH
T ss_pred E-cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHHHHH
Confidence 8 578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHH
Q 001973 387 KDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYE 434 (988)
Q Consensus 387 kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~ 434 (988)
||++++.+++++.|+++|++++++++|+++.+.|+|++|+++++++++
T Consensus 239 kd~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pdu_A 239 KDLRLAVELGDRLGQPLHGAATANESFKRARAAGHADEDFAAVFRVLE 286 (287)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHC
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCcCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999875
No 9
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=4.9e-41 Score=370.53 Aligned_cols=285 Identities=28% Similarity=0.433 Sum_probs=273.6
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
|||+|||+|.||.+||.+|+++||+|++|||++++.+.+.+.|+..++++.++++++|+||+|||++..++.++++.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~l 81 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHGV 81 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcchH
Confidence 69999999999999999999999999999999999999999999999999999999999999999998899999877788
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEE
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLY 306 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~ 306 (988)
.+.++++++|||+||+.|.+.+++.+.+.+ .|.+|+++|+++++..+..++++++++|+++.+++++++|+.++.+++
T Consensus 82 ~~~l~~~~~vi~~st~~~~~~~~~~~~~~~--~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~ 159 (287)
T 3pef_A 82 LEGIGEGRGYVDMSTVDPATSQRIGVAVVA--KGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMGKKII 159 (287)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHEEEEE
T ss_pred hhcCCCCCEEEeCCCCCHHHHHHHHHHHHH--hCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhCCCeE
Confidence 899999999999999999999999999887 579999999999999999999999999999999999999999999988
Q ss_pred EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhHHH
Q 001973 307 VIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFV 386 (988)
Q Consensus 307 ~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~ 386 (988)
+ +|+.|.++++|+++|++.+.++.+++|++.++++.|+|++++.++++.+.+.||.++++.+++..++|.++|+++++.
T Consensus 160 ~-~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T 3pef_A 160 H-LGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQ 238 (287)
T ss_dssp E-CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHH
T ss_pred E-eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchHHHH
Confidence 8 588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHH
Q 001973 387 KDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYE 434 (988)
Q Consensus 387 kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~ 434 (988)
||++++.+++++.|+++|+++.++++|+++.+.|+|++|+++++++++
T Consensus 239 kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pef_A 239 KDLRLAVALGDRVGQPLVASAAANELFKGARAAGFGDEDFSAIFKTYE 286 (287)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGGC
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999988764
No 10
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=7.6e-40 Score=363.82 Aligned_cols=290 Identities=27% Similarity=0.477 Sum_probs=275.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
||||+|||+|.||..||.+|+++||+|++|||++++.+.+.+.|+..++++.++++++|+||+|||++.+++.+++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 82 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 82 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCchh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999966558
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeE
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKL 305 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v 305 (988)
+.+.+.++++||++||+.|.+.+++.+.+.+ .+.+|+++|+++++..+..++++++++|+++.+++++++|+.+|+++
T Consensus 83 ~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~--~g~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~ll~~~g~~~ 160 (302)
T 2h78_A 83 LLAHIAPGTLVLECSTIAPTSARKIHAAARE--RGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGRNI 160 (302)
T ss_dssp GGGSSCSSCEEEECSCCCHHHHHHHHHHHHH--TTCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEE
T ss_pred HHhcCCCCcEEEECCCCCHHHHHHHHHHHHH--cCCEEEEEEccCChhhHhcCCceEEeCCCHHHHHHHHHHHHHhCCCe
Confidence 8889999999999999999999999998877 57899999999999999999999999999999999999999999998
Q ss_pred EEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccc-------cccCCCCCC
Q 001973 306 YVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVP-------HMLDNDYTP 378 (988)
Q Consensus 306 ~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~~ 378 (988)
+++ ++.+.++++|+++|++.+.++.+++|++.++++.|++++++.+++..+.+.||.++.+.+ ++..++|.+
T Consensus 161 ~~~-~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~ 239 (302)
T 2h78_A 161 FHA-GPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSG 239 (302)
T ss_dssp EEE-ESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCS
T ss_pred EEc-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCC
Confidence 884 779999999999999999999999999999999999999999999999999999998888 889999999
Q ss_pred CchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhC
Q 001973 379 YSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSG 438 (988)
Q Consensus 379 ~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g 438 (988)
+|+++++.||+++++++++++|+++|+++.++++|+.+.+.|+|++||+++++++++.+|
T Consensus 240 g~~~~~~~kD~~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~ 299 (302)
T 2h78_A 240 GFMAQLMAKDLGLAQEAAQASASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQG 299 (302)
T ss_dssp SSBHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC-
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999987765
No 11
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=2.5e-38 Score=350.14 Aligned_cols=269 Identities=27% Similarity=0.347 Sum_probs=252.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+|||+|||+|.||.+||.+|+++||+|++|||++++.+.+.+.|+..+++++++++ +|+||+|||++.+++.++ ++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~---~~ 90 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVV---GE 90 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHH---HH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHH---HH
Confidence 47999999999999999999999999999999999999999999999999999999 999999999998899988 68
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeE
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKL 305 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v 305 (988)
+.+.++++++|||+||+.|.+++++.+.+.+ .+++|+++|+++++..+..+++++++||+++.+++++++|+.+++++
T Consensus 91 l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~--~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~ 168 (296)
T 3qha_A 91 LAGHAKPGTVIAIHSTISDTTAVELARDLKA--RDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKHWAAVV 168 (296)
T ss_dssp HHTTCCTTCEEEECSCCCHHHHHHHHHHHGG--GTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHHHEEEE
T ss_pred HHHhcCCCCEEEEeCCCCHHHHHHHHHHHHH--cCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHHHcCCe
Confidence 8888999999999999999999999999877 57899999999999999999999999999999999999999999999
Q ss_pred EEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH------HHHHHhcCCCccccccccccccCCCCCCC
Q 001973 306 YVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVL------FNIITDSGGSSWMFENRVPHMLDNDYTPY 379 (988)
Q Consensus 306 ~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~------~~~l~~~~~~s~~~~~~~~~~~~~~~~~~ 379 (988)
+++ |++|.++++|+++|.+.+.++.+++|++.++++.|+|++++ .+++..+.+.||..+ .++++.+ |.++
T Consensus 169 ~~~-g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~-~~~~ 244 (296)
T 3qha_A 169 IHA-GEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD--NMKDLEP-DNFL 244 (296)
T ss_dssp EEE-ESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS--SCSCCCT-TSTT
T ss_pred EEc-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh--chhhhhc-CCCC
Confidence 884 78999999999999999999999999999999999999999 999998888887655 7788888 8899
Q ss_pred chh-----hHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCC
Q 001973 380 SAL-----DIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQ 424 (988)
Q Consensus 380 ~~l-----~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~ 424 (988)
|++ +++.||++++.+++++.|+++|+++.++++|+.+.+.|++++
T Consensus 245 f~~~~~~~~~~~KD~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~ 294 (296)
T 3qha_A 245 YQPFLHTRGLGEKDLSLALALGEAVSVDLPLARLAYEGLAAGLGVPHKEK 294 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTCCC---
T ss_pred CchhhhhhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCcccc
Confidence 999 999999999999999999999999999999999999998654
No 12
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=100.00 E-value=8.6e-39 Score=355.40 Aligned_cols=283 Identities=19% Similarity=0.173 Sum_probs=258.4
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.+|||+|||+|.||.+||.+|+++||+|++|||++++.+.+.+.|+..++++.++++++|+||+|||++.+++.++. .+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~-~~ 86 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLG-MP 86 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHT-ST
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhc-cc
Confidence 35799999999999999999999999999999999999999999999999999999999999999999988999983 22
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCe
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEK 304 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~ 304 (988)
++ ..+.++++|||+||+.|.+++++.+.+.+ .|++|+++|++++++....+.+++++||+++.+++++++|+.++.+
T Consensus 87 ~l-~~~~~g~ivid~st~~~~~~~~l~~~~~~--~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ll~~lg~~ 163 (306)
T 3l6d_A 87 GV-ARALAHRTIVDYTTNAQDEGLALQGLVNQ--AGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRALLEGLAGH 163 (306)
T ss_dssp TH-HHHTTTCEEEECCCCCTTHHHHHHHHHHH--TTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHHHHHTTCSE
T ss_pred ch-hhccCCCEEEECCCCCHHHHHHHHHHHHH--cCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHHHHHHhcCC
Confidence 44 44578999999999999999999999877 6799999999999988888888999999999999999999999888
Q ss_pred EEEEe--CC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcC--CCccccccccccccCCCCCCC
Q 001973 305 LYVIK--GG-CGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSG--GSSWMFENRVPHMLDNDYTPY 379 (988)
Q Consensus 305 v~~~~--g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~--~~s~~~~~~~~~~~~~~~~~~ 379 (988)
+++ + |+ +|.++.+| .+.+.++.+++|++.++++.|+|++++.++++.+. +.||.++++.++++.++|.++
T Consensus 164 ~~~-~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 238 (306)
T 3l6d_A 164 TVF-LPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGD 238 (306)
T ss_dssp EEE-CCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTT
T ss_pred EEE-ecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCC
Confidence 888 5 54 89999999 34456789999999999999999999999999886 689999999999999999875
Q ss_pred -chhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHh
Q 001973 380 -SALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETL 436 (988)
Q Consensus 380 -~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~ 436 (988)
|+++.+.||++++.+++++.|+++|+.+++.++|+.+.+.|+|++|++++++++++.
T Consensus 239 ~~~~~~~~KDl~~~~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~~~~ 296 (306)
T 3l6d_A 239 QARLDVHADAFAHIAQSLHAQGVWTPVFDAVCQVVQRAAAMGYGDQDIAATTKSFARE 296 (306)
T ss_dssp SSBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGGC--
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhH
Confidence 799999999999999999999999999999999999999999999999999988764
No 13
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=8.2e-36 Score=330.82 Aligned_cols=291 Identities=25% Similarity=0.463 Sum_probs=270.7
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
|||+|||+|.||..++.+|.++|++|++|||++++.+.+.+.|+...+++.++++++|+||+|+|++.+++.++++.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~~l 85 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI 85 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcchH
Confidence 69999999999999999999999999999999999999998899888999999999999999999998899988654577
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEE
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLY 306 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~ 306 (988)
.+.+.++++||++|++.|.+.+.+.+.+.+ .+.+|+++|+++++..+..+.+.++++++++.++.++++|+.+|.+++
T Consensus 86 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~--~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~~~ 163 (299)
T 1vpd_A 86 IEGAKPGTVLIDMSSIAPLASREISDALKA--KGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV 163 (299)
T ss_dssp HHHCCTTCEEEECSCCCHHHHHHHHHHHHT--TTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEEEE
T ss_pred hhcCCCCCEEEECCCCCHHHHHHHHHHHHH--cCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCCeE
Confidence 788999999999999999988999998876 578999999999988888888899999999999999999999999888
Q ss_pred EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhHHH
Q 001973 307 VIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFV 386 (988)
Q Consensus 307 ~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~ 386 (988)
+ .++.|.+.++|+++|.+...++.+++|++.++++.|++++++.+++..+...++.+....+.++.++|.++|+++.+.
T Consensus 164 ~-~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~ 242 (299)
T 1vpd_A 164 H-TGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHI 242 (299)
T ss_dssp E-EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHH
T ss_pred E-eCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHHH
Confidence 7 588999999999999999999999999999999999999999999998887888777777888888888899999999
Q ss_pred HHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhCcc
Q 001973 387 KDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSGVK 440 (988)
Q Consensus 387 kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~ 440 (988)
||++.+.++++++|+++|+.++++++++++.+.|+|++||+++++++++.+|.+
T Consensus 243 kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~ 296 (299)
T 1vpd_A 243 KDLANALDTSHGVGAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAKVE 296 (299)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999888765
No 14
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=100.00 E-value=2.1e-35 Score=327.92 Aligned_cols=296 Identities=35% Similarity=0.569 Sum_probs=272.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
++|||+|||+|.||..++.+|.+.||+|++|||++++.+.+.+.|+..++++.++++++|+||+|+|.+..++.++.+.+
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~ 82 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPG 82 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcc
Confidence 34799999999999999999999999999999999999999988988889999999999999999999998999985444
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCe
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEK 304 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~ 304 (988)
++.+.+.++++||+++++.|.+.+.+.+.+.+ .+++|+++|+++++..+..|.++++++++++.++.++++|+.+|.+
T Consensus 83 ~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~--~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~ll~~~g~~ 160 (301)
T 3cky_A 83 GVLSACKAGTVIVDMSSVSPSSTLKMAKVAAE--KGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKD 160 (301)
T ss_dssp CHHHHSCTTCEEEECCCCCHHHHHHHHHHHHH--TTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEE
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHH--cCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCC
Confidence 77788999999999999999999999998877 5789999999999877778888889999999999999999999998
Q ss_pred EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccc-cccCCCCCCCchhh
Q 001973 305 LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVP-HMLDNDYTPYSALD 383 (988)
Q Consensus 305 v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~~~l~ 383 (988)
+++ .++.|.+.++|+++|.+...++.++.|++.++++.|++++++.+++..+...++.+....+ .++.+++.++|+++
T Consensus 161 ~~~-~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~ 239 (301)
T 3cky_A 161 IYH-VGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMD 239 (301)
T ss_dssp EEE-EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHH
T ss_pred EEE-eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHH
Confidence 887 4789999999999999999999999999999999999999999999988777887777778 88899999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhCccccC
Q 001973 384 IFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSGVKVEG 443 (988)
Q Consensus 384 ~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~~~~ 443 (988)
.+.||++.+.++++++|+++|+.++++++++++.+.|+|+.||+++++++++.+|.++.|
T Consensus 240 ~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~ 299 (301)
T 3cky_A 240 LQHKDLGLALEAGKEGNVPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTGVSVSG 299 (301)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHHHHCCCCSC
T ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCCCCC
Confidence 999999999999999999999999999999999999999999999999999998887665
No 15
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=100.00 E-value=4.9e-35 Score=323.86 Aligned_cols=292 Identities=25% Similarity=0.423 Sum_probs=267.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+|||+|||+|.||..+|.+|.+.||+|++|| ++++.+.+.+.|+..++++.++++++|+||+|+|.+.+++.++.+.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~ 81 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEHG 81 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTTS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCchh
Confidence 3699999999999999999999999999999 999999998889888899999999999999999999988998854336
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeE
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKL 305 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v 305 (988)
+.+.+.++++||++++..|.+.+++.+.+.+ .+++|+++|+++++..+..+.++++++++++.++.++++|+.+|.++
T Consensus 82 l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~--~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ll~~~g~~~ 159 (295)
T 1yb4_A 82 CAKTSLQGKTIVDMSSISPIETKRFAQRVNE--MGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNI 159 (295)
T ss_dssp STTSCCTTEEEEECSCCCHHHHHHHHHHHHT--TTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEE
T ss_pred HhhcCCCCCEEEECCCCCHHHHHHHHHHHHH--cCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCE
Confidence 7778889999999999999999999998876 57899999999988877788888899999999999999999999988
Q ss_pred EEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhHH
Q 001973 306 YVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIF 385 (988)
Q Consensus 306 ~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~ 385 (988)
++ .++.|.+.+.|+++|.+...++.++.|++.++++.|++++++.+++..+...++.+.++.+.+..+++.++|+++.+
T Consensus 160 ~~-~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~ 238 (295)
T 1yb4_A 160 TL-VGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALH 238 (295)
T ss_dssp EE-EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHH
T ss_pred EE-eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHH
Confidence 87 47899999999999999999999999999999999999999999999888777777766677888889999999999
Q ss_pred HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhCccc
Q 001973 386 VKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSGVKV 441 (988)
Q Consensus 386 ~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~~ 441 (988)
.||++++.+.++++|+++|+.++++++++++.+.|+|++|++++++++++..+.++
T Consensus 239 ~kd~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~ 294 (295)
T 1yb4_A 239 QKDLNLALQSAKALALNLPNTATCQELFNTCAANGGSQLDHSAMVQALELMANHKL 294 (295)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999998877654
No 16
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.9e-35 Score=328.11 Aligned_cols=274 Identities=20% Similarity=0.218 Sum_probs=241.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhCC-CeEEEEeCCh-------hHHHHHHhcCCcccC-CHHHHhccCcEEEEEcCChHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSN-FTVIGYDVYR-------PTLTKFQNVGGLIAN-SPAEAAKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G-~~V~v~dr~~-------~~~~~l~~~G~~~~~-s~~e~~~~aDvV~l~vp~~~~~ 216 (988)
+|||+|||+|+||.+||.+|+++| |+|++|||++ +..+.+.+.|+ ++ ++.+++++||+||+|||++...
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~~~ 101 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAATK 101 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGGHH
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHHHH
Confidence 369999999999999999999999 9999999998 56677777787 66 8999999999999999998876
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHH
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGS 296 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ 296 (988)
+.+ +++.+.++++++|||+||+.|.+.+++.+.+.+ .|.+|+++|++|+ ..+..+++++++||+.+ +++++
T Consensus 102 ~~~----~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~--~g~~~~d~pv~g~-~~a~~g~l~i~vgg~~~--~~~~~ 172 (317)
T 4ezb_A 102 AVA----ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIAT--GKGSFVEGAVMAR-VPPYAEKVPILVAGRRA--VEVAE 172 (317)
T ss_dssp HHH----HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHT--SSCEEEEEEECSC-STTTGGGSEEEEESTTH--HHHHH
T ss_pred HHH----HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHH--cCCeEEeccCCCC-chhhcCCEEEEEeCChH--HHHHH
Confidence 654 478888999999999999999999999999887 5789999999995 56677889999999987 89999
Q ss_pred HHHhcCCeEEEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcC-CCccccccccccccCC
Q 001973 297 VLSALSEKLYVIKGG-CGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSG-GSSWMFENRVPHMLDN 374 (988)
Q Consensus 297 ll~~~g~~v~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~-~~s~~~~~~~~~~~~~ 374 (988)
+|+.++++++++ |+ +|.++++|+++|++.++++++++|++.+|++.|+|++ +++.+..+. +.+| ..+.++++.+
T Consensus 173 ll~~~g~~v~~~-g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~-~~~~l~~~~~~~~~--~~~~~~~~~~ 248 (317)
T 4ezb_A 173 RLNALGMNLEAV-GETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTER-ILDSVQETFPGLDW--RDVADYYLSR 248 (317)
T ss_dssp HHHTTTCEEEEE-ESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHSTTSCH--HHHHHHHHHH
T ss_pred HHHHhCCCeEEe-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHhcCccccH--HHhhhhhhcC
Confidence 999999999986 55 9999999999999999999999999999999999995 556666554 3444 4566778888
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHH----HHHHHHcCCC-CCChHHHHHHHHHhh
Q 001973 375 DYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQL----FLAGSAAGWG-RQDDAAVVKVYETLS 437 (988)
Q Consensus 375 ~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~----~~~a~~~g~g-~~d~~a~~~~~~~~~ 437 (988)
+|.++|+ +.||++++.+++++.|+++|+++++.++ |+.+.+.|++ ++||+++++.+....
T Consensus 249 ~~~~g~~---~~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~ 313 (317)
T 4ezb_A 249 TFEHGAR---RVTEMTEAAETIESFGLNAPMSRAACETIAAAHAAMKDQGLSVNDGYRGFVPVLARRL 313 (317)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHTTSSCCTTSHHHHHHHHHHHHC
T ss_pred CCCCCcc---hHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhhc
Confidence 8877777 4899999999999999999999999999 7777888997 999999999987653
No 17
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=100.00 E-value=3.1e-34 Score=317.61 Aligned_cols=286 Identities=30% Similarity=0.547 Sum_probs=258.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
|||+|||+|.||..++.+|.++||+|++|||++++.+.+.+.|+..++++.++++++|+||+|+|.+..++.++...+.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~~ 80 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANGI 80 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTSG
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchhH
Confidence 48999999999999999999999999999999999999998898888999999999999999999998899988543345
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEE
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLY 306 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~ 306 (988)
.+.++++++||+++++.+.+.+++.+.+.+ .+..|+++|+++++..+..+.+.++++++++.++.++++|+.+|.+++
T Consensus 81 ~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~--~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~ 158 (296)
T 2gf2_A 81 LKKVKKGSLLIDSSTIDPAVSKELAKEVEK--MGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVV 158 (296)
T ss_dssp GGTCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHHTTTEEEEE
T ss_pred HhcCCCCCEEEECCCCCHHHHHHHHHHHHH--cCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHHHHHcCCeE
Confidence 667889999999999999999988888876 478899999999988888899899999999999999999999999888
Q ss_pred EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccccccc--ccc-----cCCCCCCC
Q 001973 307 VIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRV--PHM-----LDNDYTPY 379 (988)
Q Consensus 307 ~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~--~~~-----~~~~~~~~ 379 (988)
++ +..|.+.+.|+++|.+..+++.++.|++.++++.|++++++.+++..+.+.++.+.... +.+ ..++|.++
T Consensus 159 ~~-~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g 237 (296)
T 2gf2_A 159 YC-GAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGG 237 (296)
T ss_dssp EE-ESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSS
T ss_pred Ee-CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCC
Confidence 74 77999999999999999999999999999999999999999999998777777765432 222 34678889
Q ss_pred chhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHH
Q 001973 380 SALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYET 435 (988)
Q Consensus 380 ~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~ 435 (988)
|.++.+.||++++.++++++|+++|++++++++++.+.+.|+|++|++++++++++
T Consensus 238 ~~~~~~~kd~~~~~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~ 293 (296)
T 2gf2_A 238 FGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLRE 293 (296)
T ss_dssp SBHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHTTTCTTSBGGGHHHHHSC
T ss_pred CchHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999998764
No 18
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=100.00 E-value=2e-34 Score=332.73 Aligned_cols=289 Identities=18% Similarity=0.139 Sum_probs=247.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc--------------------CCcccCCHHHHhccCcE
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV--------------------GGLIANSPAEAAKDVGV 205 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~--------------------G~~~~~s~~e~~~~aDv 205 (988)
..+|+|||+|+||++||.+|+++||+|++|||++++++.+++. ++++++++.+++++||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 3589999999999999999999999999999999999998763 24568899999999999
Q ss_pred EEEEcCChH----------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccc
Q 001973 206 LVIMVTNEA----------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRA 275 (988)
Q Consensus 206 V~l~vp~~~----------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a 275 (988)
||+|||++. .+++++ +++.++++++++||++||+.|++++++.+.+.+.+.+ .+.++.++|.++
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v~---~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~---~d~~v~~~Pe~a 161 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAAA---REIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPN---SGAKVVSNPEFL 161 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHHH---HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTT---SCCEEEECCCCC
T ss_pred EEEEcCCCCccccCCccHHHHHHHH---HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCC---CCceEEeCcccc
Confidence 999999985 588888 6888999999999999999999999999998875432 567788888888
Q ss_pred cCCCe--------EEEEeCC-HHHHHHHHHHHHhcCCe---EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 001973 276 SMGEL--------TIMAAGT-EESLKSTGSVLSALSEK---LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARL 343 (988)
Q Consensus 276 ~~g~l--------~~~~gg~-~~~~~~~~~ll~~~g~~---v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~ 343 (988)
.+|.+ .+++|++ ++.++.++++|+.++.+ +++ .++++.++..|+++|++.++++++++|+..+|++.
T Consensus 162 ~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~ly~~~~~~~~~~~~-~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~~ 240 (446)
T 4a7p_A 162 REGAAIEDFKRPDRVVVGTEDEFARQVMREIYRPLSLNQSAPVL-FTGRRTSELIKYAANAFLAVKITFINEIADLCEQV 240 (446)
T ss_dssp CTTSHHHHHHSCSCEEEECSCHHHHHHHHHHHCSCC-----CEE-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccchhhhccCCCEEEEeCCcHHHHHHHHHHHHHHhcCCCeEEE-eCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88875 6788875 78999999999998875 355 57999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCC
Q 001973 344 GLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGR 423 (988)
Q Consensus 344 Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~ 423 (988)
|+|++++.++++.+...++. ++ ...++|...++.||+.++.+.|++.|+++|+++++.++++.....
T Consensus 241 GiD~~~v~~~~~~~~rig~~-------~l--~pg~G~gg~c~~KD~~~l~~~A~~~g~~~~l~~~~~~iN~~~~~~---- 307 (446)
T 4a7p_A 241 GADVQEVSRGIGMDNRIGGK-------FL--HAGPGYGGSCFPKDTLALMKTAADNETPLRIVEATVQVNDARKRA---- 307 (446)
T ss_dssp TCCHHHHHHHHHTSTTC----------CC--CCCSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH----
T ss_pred CCCHHHHHHHHhcCCCCCCc-------cC--CCCCCcchhhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH----
Confidence 99999999999876432221 11 123568889999999999999999999999999999999998877
Q ss_pred CChHHHHHHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 424 QDDAAVVKVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 424 ~d~~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
+++.+.+..|..+.| ++...||..||++++|
T Consensus 308 -----~~~~i~~~l~~~~~~--------~~v~vlGlafK~~~dD 338 (446)
T 4a7p_A 308 -----MGRKVIKAMGGDVRG--------KTVGILGLTFKPNTDD 338 (446)
T ss_dssp -----HHHHHHHHTTSCCTT--------CEEEEECCSSSTTSCC
T ss_pred -----HHHHHHHHhcccCCC--------CEEEEEEEEeCCCCcc
Confidence 888887777766777 6678888889988888
No 19
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=100.00 E-value=4.5e-34 Score=319.40 Aligned_cols=287 Identities=22% Similarity=0.384 Sum_probs=262.6
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
+..|||+|||+|.||..+|.+|++.|++|++|||++++.+.+.+.|....+++.++++++|+||+|+|++..++.++...
T Consensus 28 ~~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~ 107 (316)
T 2uyy_A 28 PTDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGP 107 (316)
T ss_dssp CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred CCCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCc
Confidence 34579999999999999999999999999999999999999988898888899999999999999999988899988543
Q ss_pred cchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCC
Q 001973 224 LGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSE 303 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~ 303 (988)
.++.+.+.++++||++|+..|...+++.+.+.. .+..|+++|+++++..+..+.+.++++|+++.++.++++|+.+|.
T Consensus 108 ~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~--~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~ll~~~g~ 185 (316)
T 2uyy_A 108 SGVLQGIRPGKCYVDMSTVDADTVTELAQVIVS--RGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGK 185 (316)
T ss_dssp TCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEE
T ss_pred hhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHH--cCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHHHHHhcC
Confidence 345677889999999999999999999988876 468899999999988888898888889999999999999999999
Q ss_pred eEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhh
Q 001973 304 KLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALD 383 (988)
Q Consensus 304 ~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~ 383 (988)
++++ .++++.+.+.|++.|.+.+.+..++.|++.++++.|++++++.+++..+...++.+....+.++.+++.++|+++
T Consensus 186 ~~~~-~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~ 264 (316)
T 2uyy_A 186 TSFF-LGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLK 264 (316)
T ss_dssp EEEE-CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHH
T ss_pred CEEE-eCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHH
Confidence 8887 588999999999999999999999999999999999999999999998887788777667778888898999999
Q ss_pred HHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHH
Q 001973 384 IFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVY 433 (988)
Q Consensus 384 ~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~ 433 (988)
.+.||++++++++++.|+++|+.++++++++++.+.|+|++|++++++++
T Consensus 265 ~~~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g~g~~d~~~~~~~~ 314 (316)
T 2uyy_A 265 YIQKDLRLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAY 314 (316)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGT
T ss_pred HHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988764
No 20
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=1e-34 Score=323.41 Aligned_cols=270 Identities=17% Similarity=0.190 Sum_probs=237.9
Q ss_pred hcCCCCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCC--hhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHH
Q 001973 141 AKSNSVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVY--RPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAE 217 (988)
Q Consensus 141 m~~~~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~--~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~ 217 (988)
|+++.+|||+|||+|.||.+||.+|+++|| +|++|||+ +++.+.+.+.|+..++++.+++++||+||+|||++...+
T Consensus 19 ~~~~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~ 98 (312)
T 3qsg_A 19 YFQSNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALE 98 (312)
T ss_dssp ------CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHH
T ss_pred cccCCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHH
Confidence 344456899999999999999999999999 99999997 688888888999999999999999999999999988665
Q ss_pred HHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHH
Q 001973 218 SVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSV 297 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~l 297 (988)
++ +++.+.++++++|||+||+.|.+++++.+.+.+...|.+|+++|+++++.. ..+.++++++|+.+ ++++++
T Consensus 99 -~~---~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~-~~g~l~i~vgg~~~--~~~~~l 171 (312)
T 3qsg_A 99 -VA---QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKP-HGHRVPLVVDGDGA--RRFQAA 171 (312)
T ss_dssp -HH---HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTT-TGGGSEEEEESTTH--HHHHHH
T ss_pred -HH---HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchh-hcCCEEEEecCChH--HHHHHH
Confidence 44 578888999999999999999999999999887433899999999997654 47888999999988 899999
Q ss_pred HHhcCCeEEEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCC
Q 001973 298 LSALSEKLYVIKGG-CGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDY 376 (988)
Q Consensus 298 l~~~g~~v~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~ 376 (988)
|+.+|++++++ |+ +|.++++|+++|++.+.++.+++|++.+|++.|+|+ ++.+.+..+. .++.+.++.++++.++|
T Consensus 172 l~~~g~~~~~~-g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~-~~~~~l~~~~-~~~~~~~~~~~~~~~~~ 248 (312)
T 3qsg_A 172 FTLYGCRIEVL-DGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLAD-RVLASLDASF-PEHHLRDLALYLVERNL 248 (312)
T ss_dssp HHTTTCEEEEC-CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHS-GGGTHHHHHHHHHHHHH
T ss_pred HHHhCCCeEEc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHhcC-CchhHHHhhhHhhcCCC
Confidence 99999999885 65 999999999999999999999999999999999999 5778888776 35666777788888888
Q ss_pred CCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCC
Q 001973 377 TPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGR 423 (988)
Q Consensus 377 ~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~ 423 (988)
.++|++ .||++++.+++++.|+++|+++++.++|+++.+.|+++
T Consensus 249 ~~g~~~---~KDl~~~~~~a~~~g~~~pl~~~~~~~~~~~~~~g~~~ 292 (312)
T 3qsg_A 249 EHADRR---AHELGEVAATLCSVGVEPLVAEAGYRRLTRVAQVRAAL 292 (312)
T ss_dssp HHHHHH---HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred Ccccch---HHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHhcCCcc
Confidence 888875 79999999999999999999999999999999988765
No 21
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=100.00 E-value=3.7e-34 Score=315.83 Aligned_cols=285 Identities=28% Similarity=0.405 Sum_probs=260.9
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
|||+|||+|.||..++.+|.+ ||+|++|||++++.+.+.+.|+..++ +.++++++|+||+|+|++..++.++ +++
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~---~~l 76 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVA---EAL 76 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHH---HHH
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHH---HHH
Confidence 589999999999999999999 99999999999999998887877766 7888899999999999988788887 567
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEE
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLY 306 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~ 306 (988)
.+.+.++++||++|+..+...+.+.+.+.+ .+.+|+++|+++++..+..|.++++++++++.++.++++| .+|.+++
T Consensus 77 ~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~--~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~~g~~~~ 153 (289)
T 2cvz_A 77 YPYLREGTYWVDATSGEPEASRRLAERLRE--KGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AYAKKVV 153 (289)
T ss_dssp TTTCCTTEEEEECSCCCHHHHHHHHHHHHT--TTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TTEEEEE
T ss_pred HhhCCCCCEEEECCCCCHHHHHHHHHHHHH--cCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-hhcCCeE
Confidence 778889999999999999999999998876 4788999999998888888888888999999999999999 9998887
Q ss_pred EEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccc-cccCCCCCCCchhhHH
Q 001973 307 VIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVP-HMLDNDYTPYSALDIF 385 (988)
Q Consensus 307 ~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~~~l~~~ 385 (988)
+ .++.+.+.++|+++|.+...++.++.|++.++++.|++++++.+++..+...++++.+..+ .++.+++.++++++.+
T Consensus 154 ~-~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~ 232 (289)
T 2cvz_A 154 H-VGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLL 232 (289)
T ss_dssp E-EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHH
T ss_pred E-cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHH
Confidence 7 4788999999999999999999999999999999999999999999988777777777777 7888889899999999
Q ss_pred HHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhCcc
Q 001973 386 VKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSGVK 440 (988)
Q Consensus 386 ~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~ 440 (988)
.||++.+.++++++|+++|+.++++++++++.+.|+|++||+++++.+++..|.+
T Consensus 233 ~kd~~~~~~~a~~~gv~~p~~~~v~~~~~~a~~~g~~~~d~~~~~~~~~~~~~~~ 287 (289)
T 2cvz_A 233 VKDLGIAMGVLDGEKAPSPLLRLAREVYEMAKRELGPDADHVEALRLLERWGGVE 287 (289)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHCTTSBGGGGHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999999887754
No 22
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=4e-33 Score=324.03 Aligned_cols=295 Identities=14% Similarity=0.108 Sum_probs=248.1
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc--------------------CCcccCCHHHHhccCcEE
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV--------------------GGLIANSPAEAAKDVGVL 206 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~--------------------G~~~~~s~~e~~~~aDvV 206 (988)
|||+|||+|+||.++|.+|+++||+|++||+++++++.+++. ++.+++++.+++++||+|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDvV 82 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADII 82 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCEE
Confidence 699999999999999999999999999999999999988762 235678999999999999
Q ss_pred EEEcCChH---------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCc-eEecCcccCCccccc
Q 001973 207 VIMVTNEA---------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDL-KLVDAPVSGGVKRAS 276 (988)
Q Consensus 207 ~l~vp~~~---------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~-~~ldapv~g~~~~a~ 276 (988)
|+|||++. .+++++ +++.++++++++||++||+.|++++++.+.+.+.+.+. ...+.++.++|.++.
T Consensus 83 iiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~ 159 (450)
T 3gg2_A 83 FIAVGTPAGEDGSADMSYVLDAA---RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLK 159 (450)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCC
T ss_pred EEEcCCCcccCCCcChHHHHHHH---HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhhc
Confidence 99999984 688887 68889999999999999999999999998887632111 125567777788888
Q ss_pred CCCe--------EEEEeC-CHHHHHHHHHHHHhcCCe--EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 001973 277 MGEL--------TIMAAG-TEESLKSTGSVLSALSEK--LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGL 345 (988)
Q Consensus 277 ~g~l--------~~~~gg-~~~~~~~~~~ll~~~g~~--v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gi 345 (988)
+|.. .+++|+ +++.++.++++|+.++.+ +++ .++++.++++|+++|++.++++++++|+..+|++.|+
T Consensus 160 eG~~~~~~~~p~~ivvG~~~~~~~~~~~~l~~~~~~~~~~~~-~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gi 238 (450)
T 3gg2_A 160 EGNAIDDFMKPDRVVVGVDSDRARELITSLYKPMLLNNFRVL-FMDIASAEMTKYAANAMLATRISFMNDVANLCERVGA 238 (450)
T ss_dssp TTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTTCCSCCCEE-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ccchhhhccCCCEEEEEcCCHHHHHHHHHHHHHHhcCCCeEE-ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8876 477776 588999999999999862 444 4799999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCccccccccccccCCCCC--CCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCC
Q 001973 346 NTRVLFNIITDSGGSSWMFENRVPHMLDNDYT--PYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGR 423 (988)
Q Consensus 346 d~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~--~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~ 423 (988)
|++++.++++.+.. +....|. ++|...++.||+.++.+.|++.|+++|+++++.++++...+.
T Consensus 239 d~~~v~~~~~~~~r-----------ig~~~~~pg~G~gg~c~~KD~~~l~~~a~~~g~~~~l~~~~~~iN~~~~~~---- 303 (450)
T 3gg2_A 239 DVSMVRLGIGSDSR-----------IGSKFLYPGCGYGGSCFPKDVKALIRTAEDNGYRMEVLEAVERVNEKQKSI---- 303 (450)
T ss_dssp CHHHHHHHHHTSTT-----------TCSSSCCCSSCCCSSHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTH----
T ss_pred CHHHHHHHHcCCCC-----------CCcccCCCCCCCCcccHHhhHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH----
Confidence 99999999987542 1112223 357889999999999999999999999999999999988776
Q ss_pred CChHHHHHHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchhhhhHhhhccCcE
Q 001973 424 QDDAAVVKVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPIDDIKGLIKKNAKT 479 (988)
Q Consensus 424 ~d~~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (988)
+++.+.+..+..+.| ++...||..||++++| .|+.|.
T Consensus 304 -----~~~~~~~~~~~~~~~--------~~v~vlGlafK~~~dD------~R~sp~ 340 (450)
T 3gg2_A 304 -----LFDKFSTYYKGNVQG--------RCVAIWGLSFKPGTDD------MREAPS 340 (450)
T ss_dssp -----HHHHHHHHTTTCCTT--------CEEEEECCSSSTTCCC------CTTCHH
T ss_pred -----HHHHHHHHhcccCCC--------CEEEEEeeeeCCCCcc------cccChH
Confidence 787777776666677 6678889999999888 555553
No 23
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=100.00 E-value=1.2e-32 Score=310.38 Aligned_cols=280 Identities=22% Similarity=0.268 Sum_probs=237.0
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccC---cEEEEEcCChHHHHHHHc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDV---GVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~a---DvV~l~vp~~~~~~~vl~ 221 (988)
++|||||||+|.||..||.+|+++||+|++|||++++++.+.+.|+..+++++++++.+ |+||+|||++ .+++++
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~-~v~~vl- 98 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA-VVDSML- 98 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG-GHHHHH-
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH-HHHHHH-
Confidence 45799999999999999999999999999999999999999999999999999999999 9999999998 799998
Q ss_pred cccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhc
Q 001973 222 GDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSAL 301 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~ 301 (988)
+++.+.++++++|||+||+.|.+++++++.+.+ ++++|+++||+|++..+..|. ++++||+++++++++++|+.+
T Consensus 99 --~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~--~g~~~vdapVsGg~~~a~~G~-~im~GG~~~a~~~~~~ll~~l 173 (358)
T 4e21_A 99 --QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRA--QGITYVDVGTSGGIFGLERGY-CLMIGGEKQAVERLDPVFRTL 173 (358)
T ss_dssp --HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHT--TTCEEEEEEEECGGGHHHHCC-EEEEESCHHHHHHTHHHHHHH
T ss_pred --HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHH--CCCEEEeCCCCCCHHHHhcCC-eeeecCCHHHHHHHHHHHHHh
Confidence 688889999999999999999999999999877 689999999999999999998 999999999999999999999
Q ss_pred C--------------------CeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------------
Q 001973 302 S--------------------EKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARL------------------ 343 (988)
Q Consensus 302 g--------------------~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~------------------ 343 (988)
+ +++++ +|+.|+++.+|+++|.+.+..+.+++|++.++++.
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~ 252 (358)
T 4e21_A 174 APGIGAAPRTPGREKREGTAELGYLH-CGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRN 252 (358)
T ss_dssp SCCGGGSCCCTTGGGCCSSGGGTEEE-EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------------C
T ss_pred ccccccCcccccccccccccccceEE-ECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccc
Confidence 9 46777 58899999999999999999999999999999998
Q ss_pred ------CCCHHHHHHHHHhcC-CCccccccccccccCCCCCCCc-hhhHHHHHH---HHHHHHHHhCCCCchHHHHHHHH
Q 001973 344 ------GLNTRVLFNIITDSG-GSSWMFENRVPHMLDNDYTPYS-ALDIFVKDM---GIIARECLSQRVPLHISTIAHQL 412 (988)
Q Consensus 344 ------Gid~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~~-~l~~~~kDl---~~~~~~a~~~gi~~pi~~a~~~~ 412 (988)
|+|.+++.++++.+. ..||+++.....+.. + |.+ .+....||. ++++..|.+.|+|+|.+.++ +
T Consensus 253 ~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~-~--p~~~~~~~~~~d~g~~r~~~~~A~~~gvp~p~~~~a--l 327 (358)
T 4e21_A 253 PDFYRYDLDLADITEVWRRGSVISSWLLDLSATALLD-S--PDLQEFQGRVSDSGEGRWTVAAAIDEGVPAHVLSSA--L 327 (358)
T ss_dssp GGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHHH-C--TTCTTC--CCCCCSHHHHHHHHHHHHTCCCHHHHHH--H
T ss_pred chhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHhh-C--CChHHHHHHHHhcCcHHHHHHHHHHcCCChHHHHHH--H
Confidence 899999999999887 789988765443322 2 111 122233343 78999999999999999865 3
Q ss_pred HHHHHHcCCCCCChH-HHHHHHHHhhCc
Q 001973 413 FLAGSAAGWGRQDDA-AVVKVYETLSGV 439 (988)
Q Consensus 413 ~~~a~~~g~g~~d~~-a~~~~~~~~~g~ 439 (988)
+.+... .++.+++ .++..++...|.
T Consensus 328 ~~~~~s--~~~~~~~~~l~~a~r~~fG~ 353 (358)
T 4e21_A 328 YERFSS--RGEDDFANRLLSAMRYEFGG 353 (358)
T ss_dssp HHHHHH--TTTTHHHHHHHHHHC-----
T ss_pred HHHHHH--CCCcccHHHHHHHHHHhcCC
Confidence 433333 3556665 488888776664
No 24
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=100.00 E-value=2.2e-32 Score=317.24 Aligned_cols=295 Identities=17% Similarity=0.183 Sum_probs=242.4
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC-CC-eEEEEeCChh----HHHHHHhc---------------------C-CcccCCH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS-NF-TVIGYDVYRP----TLTKFQNV---------------------G-GLIANSP 196 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~-G~-~V~v~dr~~~----~~~~l~~~---------------------G-~~~~~s~ 196 (988)
.+|||+|||+|+||.+||.+|+++ || +|++||++++ +++.+++. | +.++++
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 457999999999999999999999 99 9999999999 98888752 2 234555
Q ss_pred HHHhccCcEEEEEcCChH--------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHH-h-cC----CCce
Q 001973 197 AEAAKDVGVLVIMVTNEA--------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQ-F-EG----KDLK 262 (988)
Q Consensus 197 ~e~~~~aDvV~l~vp~~~--------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~-~-~~----~g~~ 262 (988)
.+++++||+||+|||++. +++.+....+++.+++++|++||++||+.|++++++++.+. + .+ .++.
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~d~~ 175 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFA 175 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTTTBE
T ss_pred HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCCcee
Confidence 678999999999999983 34444433378889999999999999999999999987543 2 22 2468
Q ss_pred EecCcccCCcccccCCCe---EEEEeCCHHHHHHHHHHHHhc-CCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 001973 263 LVDAPVSGGVKRASMGEL---TIMAAGTEESLKSTGSVLSAL-SEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMA 338 (988)
Q Consensus 263 ~ldapv~g~~~~a~~g~l---~~~~gg~~~~~~~~~~ll~~~-g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~ 338 (988)
++++|++..+..+..+.+ .+++|++++.+++++++|+.+ +.++++ .+++++++.+|+++|++.++++++++|+..
T Consensus 176 v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~-~~~~~~aE~~Kl~~N~~~a~~Ia~~nE~~~ 254 (478)
T 3g79_A 176 LAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRAVELYSPVLTVGQVI-PMSATAAEVTKTAENTFRDLQIAAINQLAL 254 (478)
T ss_dssp EEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHHHHHHGGGCSSCCEE-EEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHHHHHHhhhccCCeEE-eCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999888877655443 688899999999999999999 777777 479999999999999999999999999999
Q ss_pred HHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCC--chhhHHHHHHHHHHHHHHhCCCC-------chHHHHH
Q 001973 339 FGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPY--SALDIFVKDMGIIARECLSQRVP-------LHISTIA 409 (988)
Q Consensus 339 la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~--~~l~~~~kDl~~~~~~a~~~gi~-------~pi~~a~ 409 (988)
+|++.|+|++++.+.++... ++ ++....|.|+ |...++.||+.++.+.+++.|++ +++++++
T Consensus 255 l~e~~GiD~~~v~~~~~~~~----~~-----ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~~~g~~~~~~~~~~~li~~~ 325 (478)
T 3g79_A 255 YCEAMGINVYDVRTGVDSLK----GE-----GITRAVLWPGAGVGGHCLTKDTYHLERGVKIGRGELDYPEGADSIYVLA 325 (478)
T ss_dssp HHHHTTCCHHHHHHHHHTSC----CS-----SSCCCCCCCCSCCCSSHHHHHHHHHHHHHTTSSCCCCCCSSCCCHHHHH
T ss_pred HHHHcCCCHHHHHHHHCCCc----hh-----hhccccCCCCCCcchhhHHHHHHHHHHHHHHcCCCcccccchhHHHHHH
Confidence 99999999999999988642 11 2333445554 46689999999999999999987 8999999
Q ss_pred HHHHHHHHHcCCCCCChHHHHHHHHHhh---CccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 410 HQLFLAGSAAGWGRQDDAAVVKVYETLS---GVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 410 ~~~~~~a~~~g~g~~d~~a~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
.++++..... +++.+.+.. |.++.| ++...||..||++++|
T Consensus 326 ~~iN~~~~~~---------~~~~i~~~l~~~~~~~~~--------~~v~vlGlafK~~tdD 369 (478)
T 3g79_A 326 RKVNDFMPAH---------MYNLTVAALERLGKKMDG--------SKVAMLGWAFIKDSDD 369 (478)
T ss_dssp HHHHHHHHHH---------HHHHHHHHHHTTTCCSTT--------CEEEEECSSSSTTCSC
T ss_pred HHHHHHHHHH---------HHHHHHHHHhhcccCCCC--------CEEEEEeeecCCCCcc
Confidence 9999998876 666665543 335666 6678888899988888
No 25
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=100.00 E-value=3.8e-32 Score=315.69 Aligned_cols=266 Identities=20% Similarity=0.235 Sum_probs=234.4
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCC-----cccCCHHHHhc---cCcEEEEEcCChHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGG-----LIANSPAEAAK---DVGVLVIMVTNEAQA 216 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~-----~~~~s~~e~~~---~aDvV~l~vp~~~~~ 216 (988)
.+|+|||||+|.||.+||.+|+++||+|++|||++++++.+.+.+. ..+++++++++ .+|+||+|||++..+
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 82 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAV 82 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHH
Confidence 3469999999999999999999999999999999999999987632 34689999887 499999999998889
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHH
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGS 296 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ 296 (988)
+.++ +++.+.+.+|++|||+||+.|..+.++.+.+.+ +|++|+++||+|++..+..|. .+|+||++++++++++
T Consensus 83 ~~vl---~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~--~Gi~fvd~pVsGg~~gA~~G~-~im~GG~~ea~~~v~p 156 (484)
T 4gwg_A 83 DDFI---EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKA--KGILFVGSGVSGGEEGARYGP-SLMPGGNKEAWPHIKT 156 (484)
T ss_dssp HHHH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHH
T ss_pred HHHH---HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHh--hccccccCCccCCHHHHhcCC-eeecCCCHHHHHHHHH
Confidence 9998 688899999999999999999999999998887 689999999999999999999 9999999999999999
Q ss_pred HHHhcCCeE-------EEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---HhcCCCccccc
Q 001973 297 VLSALSEKL-------YVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGAR-LGLNTRVLFNII---TDSGGSSWMFE 365 (988)
Q Consensus 297 ll~~~g~~v-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~-~Gid~~~~~~~l---~~~~~~s~~~~ 365 (988)
+|+.++.++ ++ +|+.|+++.+|+++|.+.++++++++|++.++++ .|+|++++.+++ +.+.+.||+++
T Consensus 157 ll~~ig~~v~~~~~~~~~-~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~~~S~l~e 235 (484)
T 4gwg_A 157 IFQGIAAKVGTGEPCCDW-VGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIE 235 (484)
T ss_dssp HHHHHSCBCTTSCBSBCC-CEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHH
T ss_pred HHHHhcCcccCCCceEEE-ECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCccchHHH
Confidence 999999887 66 5889999999999999999999999999999999 999999998886 57788999999
Q ss_pred cccccccCCCCCCCchhhHHHHHH------HHHHHHHHhCCCCch-HHHHHHHHHHHHH
Q 001973 366 NRVPHMLDNDYTPYSALDIFVKDM------GIIARECLSQRVPLH-ISTIAHQLFLAGS 417 (988)
Q Consensus 366 ~~~~~~~~~~~~~~~~l~~~~kDl------~~~~~~a~~~gi~~p-i~~a~~~~~~~a~ 417 (988)
+..+.+..+|+.+++.++.....+ .+....|.++|+|+| +..++...+..+.
T Consensus 236 ~~~~~l~~~D~~g~~~ld~i~d~~~~kgtG~wt~~~A~~~gvp~p~i~~av~~R~~S~~ 294 (484)
T 4gwg_A 236 ITANILKFQDTDGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSL 294 (484)
T ss_dssp HHHHHHHCBCTTSSBSGGGSCCCCCSSCTTHHHHHHHHHHTCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCccCCccHHHHhccccCcchHHHHHHHHHHcCCCchHHHHHHHHHHHhhc
Confidence 998888877777657776654332 367788999999999 5566666666553
No 26
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.97 E-value=3.9e-30 Score=301.16 Aligned_cols=289 Identities=14% Similarity=0.081 Sum_probs=240.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcC--------------------CcccCCHHHHhccCcE
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVG--------------------GLIANSPAEAAKDVGV 205 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G--------------------~~~~~s~~e~~~~aDv 205 (988)
.|||+|||+|+||.++|.+|+++||+|++||+++++++.+++.+ +.+++++.+++++||+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aDv 87 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDV 87 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCSE
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCCE
Confidence 47999999999999999999999999999999999999988752 3456788888999999
Q ss_pred EEEEcCCh---------HHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc-CCCceE-ecCcccCCccc
Q 001973 206 LVIMVTNE---------AQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFE-GKDLKL-VDAPVSGGVKR 274 (988)
Q Consensus 206 V~l~vp~~---------~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~-~~g~~~-ldapv~g~~~~ 274 (988)
||+|||+| ..+++++ +.+.+.++++++||++||+.|++++.+.+.+.+. +.+ .| ++.++.++|.+
T Consensus 88 viiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g-~~~~~~~v~~~Pe~ 163 (478)
T 2y0c_A 88 QFIAVGTPPDEDGSADLQYVLAAA---RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR-GGDQMFSVVSNPEF 163 (478)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHT-TCCCCEEEEECCCC
T ss_pred EEEEeCCCcccCCCccHHHHHHHH---HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCC-CCCccEEEEEChhh
Confidence 99999997 6788888 6788899999999999999999999998888753 112 23 56678888888
Q ss_pred ccCCCe--------EEEEeCC-H----HHHHHHHHHHHhcCC--eEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001973 275 ASMGEL--------TIMAAGT-E----ESLKSTGSVLSALSE--KLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAF 339 (988)
Q Consensus 275 a~~g~l--------~~~~gg~-~----~~~~~~~~ll~~~g~--~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l 339 (988)
+.+|.. .+++|++ + +..+.++++|+.+.+ .+++ .++++.+++.|++.|.+.++++++++|+..+
T Consensus 164 ~~eG~~~~~~~~p~~iviG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l 242 (478)
T 2y0c_A 164 LKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTL-YMDVRSAEFTKYAANAMLATRISFMNELANL 242 (478)
T ss_dssp CCTTCHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHTGGGGSSSCCEE-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcccceeeccCCCCEEEEEECCCcccHHHHHHHHHHHHHHhccCCeEE-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888886 5777765 5 788999999998875 4555 4789999999999999999999999999999
Q ss_pred HHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCC--chhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHH
Q 001973 340 GARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPY--SALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGS 417 (988)
Q Consensus 340 a~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~--~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~ 417 (988)
|++.|+|++++.+.++... ++....+.++ +...++.||++++.+.++++|+++|++++++++++...
T Consensus 243 a~~~Gid~~~v~~~i~~~~-----------rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~gv~~pl~~~v~~in~~~~ 311 (478)
T 2y0c_A 243 ADRFGADIEAVRRGIGSDP-----------RIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQK 311 (478)
T ss_dssp HHHTTCCHHHHHHHHHTST-----------TTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHT
T ss_pred HHHhCCCHHHHHHHHhcCC-----------ccCcccCCCCcccccCcCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhH
Confidence 9999999999998886321 1222233343 34456789999999999999999999999999999877
Q ss_pred HcCCCCCChHHHHHHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 418 AAGWGRQDDAAVVKVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 418 ~~g~g~~d~~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
+. +++.+.+..+.++.| ++...||..||++++|
T Consensus 312 ~~---------~~~~~~~~~~~~~~~--------~~v~vlGlafK~~~dD 344 (478)
T 2y0c_A 312 RV---------LADKIVARFGEDLTG--------RTFAIWGLAFKPNTDD 344 (478)
T ss_dssp TH---------HHHHHHHHHCSCCTT--------CEEEEECCSSSSSCCC
T ss_pred HH---------HHHHHHHHhcccCCC--------CEEEEEecccCCCCCc
Confidence 65 777777666656666 5677888899988888
No 27
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-30 Score=305.24 Aligned_cols=256 Identities=21% Similarity=0.263 Sum_probs=234.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----cCCcccCCHHHHhcc---CcEEEEEcCChHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-----VGGLIANSPAEAAKD---VGVLVIMVTNEAQAES 218 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----~G~~~~~s~~e~~~~---aDvV~l~vp~~~~~~~ 218 (988)
.+|||||+|.||++||.+|+++||+|++|||++++++.+.+ .|+..+++++++++. +|+||+|||++..+++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 90 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPVDA 90 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHHHH
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHHHH
Confidence 58999999999999999999999999999999999999988 578888999999887 9999999999888999
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHH
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVL 298 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll 298 (988)
++ +++.+.+.+|++|||+||+.|..++++.+.+.+ .|++|+++|+++++..+..|+ .+++||+++.+++++++|
T Consensus 91 vl---~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~--~g~~~v~~pVsgg~~~a~~G~-~im~gg~~e~~~~v~~ll 164 (497)
T 2p4q_A 91 LI---NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKK--KGILFVGSGVSGGEEGARYGP-SLMPGGSEEAWPHIKNIF 164 (497)
T ss_dssp HH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHH
T ss_pred HH---HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHH--cCCceeCCCcccChhHhhcCC-eEEecCCHHHHHHHHHHH
Confidence 98 678889999999999999999999999988877 578999999999999999999 889999999999999999
Q ss_pred HhcCCe------EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHH---hcCCCcccccccc
Q 001973 299 SALSEK------LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGAR-LGLNTRVLFNIIT---DSGGSSWMFENRV 368 (988)
Q Consensus 299 ~~~g~~------v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~-~Gid~~~~~~~l~---~~~~~s~~~~~~~ 368 (988)
+.++.+ +.+ +|+.|.++++|+++|.+.+.++.+++|++.++++ .|++++++.+++. .+...|++++++.
T Consensus 165 ~~~g~~~dGe~~v~~-vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~ 243 (497)
T 2p4q_A 165 QSISAKSDGEPCCEW-VGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITR 243 (497)
T ss_dssp HHHSCEETTEESCCC-CEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHH
T ss_pred HHhcCccCCCCceEE-ECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHH
Confidence 999988 566 5789999999999999999999999999999999 6999999999884 5778899988888
Q ss_pred ccccCCCCCCCchhhHHH-----HHHH-HHHHHHHhCCCCchHHHHH
Q 001973 369 PHMLDNDYTPYSALDIFV-----KDMG-IIARECLSQRVPLHISTIA 409 (988)
Q Consensus 369 ~~~~~~~~~~~~~l~~~~-----kDl~-~~~~~a~~~gi~~pi~~a~ 409 (988)
+.+..+||.++|.++.+. ||++ +..+.++++|+++|++..+
T Consensus 244 ~~l~~~d~~~~~~vd~i~D~~~~KgtG~~~~~~A~~~Gv~~P~~~~a 290 (497)
T 2p4q_A 244 DILKFDDVDGKPLVEKIMDTAGQKGTGKWTAINALDLGMPVTLIGEA 290 (497)
T ss_dssp HHHTCBCTTSSBGGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHH
T ss_pred HHHhcCCCCCccHHHHHHHhhccchHHHHHHHHHHHcCCCCchHHHH
Confidence 778888886678999888 8876 7899999999999998875
No 28
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.97 E-value=5.6e-30 Score=292.65 Aligned_cols=279 Identities=13% Similarity=0.148 Sum_probs=224.3
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc------------------CCcccCCHHHHhccCcEE
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV------------------GGLIANSPAEAAKDVGVL 206 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~------------------G~~~~~s~~e~~~~aDvV 206 (988)
.+|||+|||+|+||.++|..|++ ||+|++||+++++++.+++. ++.+++++.+++++||+|
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDvV 113 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYV 113 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCEE
Confidence 35799999999999999999998 99999999999999988762 356788999999999999
Q ss_pred EEEcCChH----------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCccccc
Q 001973 207 VIMVTNEA----------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRAS 276 (988)
Q Consensus 207 ~l~vp~~~----------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~ 276 (988)
|+|||++. .++.++ +++.+ ++++++||++||+.|++++++.+.+.+ . .++.+|+++++..+.
T Consensus 114 iiaVPt~~~~~~~~~Dl~~V~~v~---~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~--~--~v~~sPe~~~~G~A~ 185 (432)
T 3pid_A 114 IIATPTDYDPKTNYFNTSTVEAVI---RDVTE-INPNAVMIIKSTIPVGFTRDIKERLGI--D--NVIFSPEFLREGRAL 185 (432)
T ss_dssp EECCCCEEETTTTEEECHHHHHHH---HHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTC--C--CEEECCCCCCTTSHH
T ss_pred EEeCCCccccccccccHHHHHHHH---HHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhh--c--cEeecCccCCcchhh
Confidence 99999982 577776 67888 899999999999999999999998865 2 456699999999988
Q ss_pred CCCe---EEEEeCCHHHHHHHHHHHHh--cCC--eEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Q 001973 277 MGEL---TIMAAGTEESLKSTGSVLSA--LSE--KLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRV 349 (988)
Q Consensus 277 ~g~l---~~~~gg~~~~~~~~~~ll~~--~g~--~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~ 349 (988)
.+.+ .+++|++++.++++.++|.. ++. ++++ ++++.|+++|+++|++.++++++++|+..+|++.|+|+++
T Consensus 186 ~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~~~~~~v~~--~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~~GiD~~~ 263 (432)
T 3pid_A 186 YDNLHPSRIVIGERSARAERFADLLKEGAIKQDIPTLF--TDSTEAEAIKLFANTYLALRVAYFNELDSYAESQGLNSKQ 263 (432)
T ss_dssp HHHHSCSCEEESSCSHHHHHHHHHHHHHCSSSSCCEEE--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred hcccCCceEEecCCHHHHHHHHHHHHhhhccCCCeEEe--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 8777 79999999999999999986 443 3443 6899999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHH
Q 001973 350 LFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAV 429 (988)
Q Consensus 350 ~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~ 429 (988)
+.++++.....+.. +..- ..|+.-.|+.||..++.. +..|++.++++++.++++..... +
T Consensus 264 v~~~~~~dprig~~-------~~~p--g~G~GG~C~pkD~~~L~~--~~~~~~~~li~~~~~~N~~~~~~---------v 323 (432)
T 3pid_A 264 IIEGVCLDPRIGNH-------YNNP--SFGYGGYCLPKDTKQLLA--NYESVPNNIIAAIVDANRTRKDF---------I 323 (432)
T ss_dssp HHHHHHTSTTTCSS-------SCCC--CSCCCTTTHHHHHHHHHH--HTTTSCCSHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHccCCCCCcc-------cCCC--CCCCcccchhhhHHHHHH--HhcCCchhHHHHHHHHHHhhHHH---------H
Confidence 99999865432211 1111 124556788999998864 34699999999999999988776 6
Q ss_pred HHHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 430 VKVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 430 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
++.+.+.. | ++...||..||++++|
T Consensus 324 ~~~i~~~~-----~--------~~v~vlGlafK~~tdD 348 (432)
T 3pid_A 324 ADSILARK-----P--------KVVGVYRLIMKSGSDN 348 (432)
T ss_dssp HHHHHHTC-----C--------SSEEEECC--------
T ss_pred HHHHHhhc-----C--------CEEEEEeeEeCCCCcc
Confidence 66665532 2 4567888888888888
No 29
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.97 E-value=5.4e-30 Score=293.46 Aligned_cols=284 Identities=17% Similarity=0.204 Sum_probs=220.7
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc--------------------ccCCHHHHhccCcEE
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL--------------------IANSPAEAAKDVGVL 206 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~--------------------~~~s~~e~~~~aDvV 206 (988)
.|..|||+|+||.+||.+|+++||+|++||+++++++.+++.+.. ++++ +++||+|
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd----~~~aDvv 87 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTT----PEASDVF 87 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESS----CCCCSEE
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCc----hhhCCEE
Confidence 489999999999999999999999999999999999999874322 2222 3579999
Q ss_pred EEEcCChHH--------HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc-C----CCceEecCcccCCcc
Q 001973 207 VIMVTNEAQ--------AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFE-G----KDLKLVDAPVSGGVK 273 (988)
Q Consensus 207 ~l~vp~~~~--------~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~-~----~g~~~ldapv~g~~~ 273 (988)
|+|||++.. ++.|....+++.+++++|++||++||+.|++++++.+.+.+. + .++.++++|++..+.
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G 167 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPG 167 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCCCCCTT
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCCcCCCc
Confidence 999999872 233433337889999999999999999999999998876542 2 235789999888777
Q ss_pred cccCCCe---EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 001973 274 RASMGEL---TIMAAGTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVL 350 (988)
Q Consensus 274 ~a~~g~l---~~~~gg~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~ 350 (988)
.+..+.+ .+++|++++.+++++++|+.++++++++ +++++|+.+|+++|++.++++++++|+..+|++.|+|++++
T Consensus 168 ~A~~~~~~p~~Iv~G~~~~~~~~~~~ly~~~~~~~~~~-~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v 246 (431)
T 3ojo_A 168 KILEELVHNNRIIGGVTKACIEAGKRVYRTFVQGEMIE-TDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDV 246 (431)
T ss_dssp SHHHHHHHSCEEEEESSHHHHHHHHHHHTTTCCSCEEE-EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred chhhcccCCCEEEEeCCHHHHHHHHHHHHHHhCCcEEe-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 6655443 6888999999999999999999877764 78999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHH
Q 001973 351 FNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVV 430 (988)
Q Consensus 351 ~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~ 430 (988)
.++++...... .+.|+ +||.-.|+.||..++...+++.| ++++++.++++..... ++
T Consensus 247 ~~~~~~~~ri~----~l~pG-------~G~GG~C~pkD~~~L~~~a~~~~---~li~~~~~iN~~~~~~---------v~ 303 (431)
T 3ojo_A 247 IEMANKHPRVN----IHQPG-------PGVGGHCLAVDPYFIIAKDPENA---KLIQTGREINNSMPAY---------VV 303 (431)
T ss_dssp HHHHTTSTTCC----CCCCC-------SCCCCCCBCSCC---------CC---HHHHHHHHHHHTHHHH---------HH
T ss_pred HHHHccCCCcc----cCCCC-------CCccccchhhhHHHHHHHHHHHh---HHHHHHHHHHHHhHHH---------HH
Confidence 99987654321 11222 23444566699999999999988 9999999999887765 66
Q ss_pred HHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 431 KVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 431 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
+.+.+..+ .+.| ++...||..||++++|
T Consensus 304 ~~~~~~l~-~~~~--------~~v~vlGlafK~~tdD 331 (431)
T 3ojo_A 304 DTTKQIIK-ALSG--------NKVTVFGLTYKGDVDD 331 (431)
T ss_dssp HHHHHHHH-HSSC--------CEEEEECCCSSTTSCC
T ss_pred HHHHHHhh-hcCC--------CEEEEEeeeeCCCCcc
Confidence 66555442 3555 5678888889988888
No 30
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.97 E-value=1.3e-29 Score=297.19 Aligned_cols=291 Identities=13% Similarity=0.087 Sum_probs=231.4
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC--CCeEEEEeCChhHHHHHHh-------------------cCCcccCCHHHHhccC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS--NFTVIGYDVYRPTLTKFQN-------------------VGGLIANSPAEAAKDV 203 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~-------------------~G~~~~~s~~e~~~~a 203 (988)
++|||+|||+|+||.++|.+|+++ ||+|++|||++++++.+++ .++.+++++.+++++|
T Consensus 4 ~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~a 83 (467)
T 2q3e_A 4 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEA 83 (467)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcC
Confidence 357999999999999999999999 8999999999999988643 2456678888999999
Q ss_pred cEEEEEcCChHH--------------HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCccc
Q 001973 204 GVLVIMVTNEAQ--------------AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVS 269 (988)
Q Consensus 204 DvV~l~vp~~~~--------------~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~ 269 (988)
|+||+|||++.. ++.+. +++.+.++++++||++||+.|++++++.+.+.+. +..+++++++
T Consensus 84 DvViiaVptp~~~~~v~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~--~~~~~d~~V~ 158 (467)
T 2q3e_A 84 DLVFISVNTPTKTYGMGKGRAADLKYIEACA---RRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDAN--TKPNLNLQVL 158 (467)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHH---HHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHT--CCTTCEEEEE
T ss_pred CEEEEEcCCchhhccccccCCCcHHHHHHHH---HHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHh--CCCCCCeEEE
Confidence 999999998764 34444 5677888999999999999999999999888773 3445778888
Q ss_pred CCcccccCCCeE--------EEEeC-----CHHHHHHHHHHHHhc-CCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHH
Q 001973 270 GGVKRASMGELT--------IMAAG-----TEESLKSTGSVLSAL-SEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAE 335 (988)
Q Consensus 270 g~~~~a~~g~l~--------~~~gg-----~~~~~~~~~~ll~~~-g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~E 335 (988)
++|..+..|... +++|+ +++.++.++++++.+ +..+++ .++++.+++.|+++|.+.++++++++|
T Consensus 159 ~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~-~~~~~~ae~~Kl~~N~~~a~~ia~~nE 237 (467)
T 2q3e_A 159 SNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKIL-TTNTWSSELSKLAANAFLAQRISSINS 237 (467)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEE-EECHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEE-ecCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999875 77887 778899999999998 655555 478999999999999999999999999
Q ss_pred HHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCC--chHHHHHHHHH
Q 001973 336 AMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVP--LHISTIAHQLF 413 (988)
Q Consensus 336 a~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~--~pi~~a~~~~~ 413 (988)
+..+|++.|+|++++.++++.+...++. ++.. .++|...++.||+.++.+.++++|++ .++.+++.++.
T Consensus 238 ~~~l~~~~Gid~~~v~~~~~~~~~~~~~-------~~~p--g~g~gg~c~~kD~~~l~~~a~~~g~~~~~~~~~~~~~~n 308 (467)
T 2q3e_A 238 ISALCEATGADVEEVATAIGMDQRIGNK-------FLKA--SVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMN 308 (467)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTSTTTCSS-------SCCC--CSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHcCCCCCCcc-------ccCC--CCCCCCccHHHHHHHHHHHHHHcCCchHHHHHHHHHHHH
Confidence 9999999999999999999876531111 1111 12356678899999999999999987 56666666665
Q ss_pred HHHHHcCCCCCChHHHHHHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 414 LAGSAAGWGRQDDAAVVKVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 414 ~~a~~~g~g~~d~~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
+..... +++.+.+.....+.| ++...||..||++++|
T Consensus 309 ~~~~~~---------~~~~~~~~~~~~~~~--------~~v~vlGlafK~~~dD 345 (467)
T 2q3e_A 309 DYQRRR---------FASRIIDSLFNTVTD--------KKIAILGFAFKKDTGD 345 (467)
T ss_dssp HHHHHH---------HHHHHHHHTTTCCTT--------CEEEEECCSSSTTCCC
T ss_pred HHhHHH---------HHHHHHHHhhcccCC--------CEEEEEeeccCCCCcc
Confidence 444333 444444422224555 5677888888888888
No 31
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.97 E-value=2.3e-29 Score=295.63 Aligned_cols=290 Identities=12% Similarity=0.058 Sum_probs=232.6
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC--CCeEEEEeCChhHHHHHHhc-------------------CCcccCCHHHHhccC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS--NFTVIGYDVYRPTLTKFQNV-------------------GGLIANSPAEAAKDV 203 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~-------------------G~~~~~s~~e~~~~a 203 (988)
++|||+|||+|+||.++|.+|+++ ||+|++||+++++++.+++. ++.+++++.+++++|
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 357999999999999999999998 79999999999999988752 234567888889999
Q ss_pred cEEEEEcCChH--------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHh-cCCCceEecCcc
Q 001973 204 GVLVIMVTNEA--------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQF-EGKDLKLVDAPV 268 (988)
Q Consensus 204 DvV~l~vp~~~--------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~-~~~g~~~ldapv 268 (988)
|+||+|||++. .+++++ +++.++++++++||++||+.|++++++.+.+.+ .+ ....++.++
T Consensus 88 Dvvii~Vptp~~~~g~~~~~~~dl~~v~~~~---~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~-~~~~~d~~v 163 (481)
T 2o3j_A 88 DLIFISVNTPTKMYGRGKGMAPDLKYVESVS---RTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQK-NNENLKFQV 163 (481)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHH---HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC-----CCEEE
T ss_pred CEEEEecCCccccccccccCCCcHHHHHHHH---HHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhC-cCcCCceEE
Confidence 99999999874 367776 678889999999999999999999999988876 32 001233344
Q ss_pred cCCcccccCCC-----e---EEEEeCCH-----HHHHHHHHHHHhcCC-eEEEEeCCcchHHHHHHHHHHHHHHHHHHHH
Q 001973 269 SGGVKRASMGE-----L---TIMAAGTE-----ESLKSTGSVLSALSE-KLYVIKGGCGAGSGVKMANQLLAGVHIASAA 334 (988)
Q Consensus 269 ~g~~~~a~~g~-----l---~~~~gg~~-----~~~~~~~~ll~~~g~-~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~ 334 (988)
.++|.+...|. + .+++|++. +.++.++++|+.++. .+++ .++++.+++.|+++|++.++++++++
T Consensus 164 ~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~-~~d~~~ae~~Kl~~N~~~a~~ia~~n 242 (481)
T 2o3j_A 164 LSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRII-TTNTWSSELSKLVANAFLAQRISSIN 242 (481)
T ss_dssp EECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEE-EEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEE-ecCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444 1 46777754 578899999999986 5665 47899999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCC--chhhHHHHHHHHHHHHHHhCCCC--chHHHHHH
Q 001973 335 EAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPY--SALDIFVKDMGIIARECLSQRVP--LHISTIAH 410 (988)
Q Consensus 335 Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~--~~l~~~~kDl~~~~~~a~~~gi~--~pi~~a~~ 410 (988)
|+..+|++.|+|++++.++++.+.. +....|.|+ |...++.||+.++...|++.|++ +|+++++.
T Consensus 243 E~~~la~~~Gid~~~v~~~~~~~~r-----------i~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~g~~~~~~l~~~~~ 311 (481)
T 2o3j_A 243 SISAVCEATGAEISEVAHAVGYDTR-----------IGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVI 311 (481)
T ss_dssp HHHHHHHHHSCCHHHHHHHHHTSTT-----------TCSSSCCCCSCCCSSSHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCHHHHHHHHccCCC-----------CCCCCCCCCCccCCccHHHHHHHHHHHHHHcCCCccchHHHHHH
Confidence 9999999999999999999986541 111223444 47788999999999999999999 99999999
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 411 QLFLAGSAAGWGRQDDAAVVKVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 411 ~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
++.+..... +++.+.+..+..+.| ++...||..||++++|
T Consensus 312 ~~N~~~~~~---------~~~~~~~~l~~~~~~--------~~v~vlGlafK~~~dd 351 (481)
T 2o3j_A 312 NINNWQRRR---------FADKIIAELFNTVTD--------KKIAIFGFAFKKNTGD 351 (481)
T ss_dssp HHHHHHHHH---------HHHHHHHHTTTCCTT--------CEEEEECCSSSTTCCC
T ss_pred HHHHhhHHH---------HHHHHHHhhccccCC--------CeEEEEeeeeCCCCCc
Confidence 999887765 777666665545556 5677888899988888
No 32
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.97 E-value=9.2e-30 Score=298.13 Aligned_cols=257 Identities=20% Similarity=0.246 Sum_probs=230.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc----CCcccCCHHHHhcc---CcEEEEEcCChHHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV----GGLIANSPAEAAKD---VGVLVIMVTNEAQAES 218 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~----G~~~~~s~~e~~~~---aDvV~l~vp~~~~~~~ 218 (988)
+++|||||+|.||++||.+|+++||+|++|||++++++++.+. |+..+++++++++. +|+||+|||++..+++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~~ 94 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDA 94 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHHH
Confidence 4689999999999999999999999999999999999999876 78888999999887 9999999999878999
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHH
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVL 298 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll 298 (988)
++ +++.+.+.++++|||++++.|..+.++.+.+.+ .+++|+++|+++++..+..|. ++++||+++.++.++++|
T Consensus 95 vl---~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~--~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll 168 (480)
T 2zyd_A 95 AI---DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSA--EGFNFIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPIL 168 (480)
T ss_dssp HH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEEEEEESHHHHHHHCC-EEEEESCHHHHHHHHHHH
T ss_pred HH---HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHH--CCCCeeCCccccCHhHHhcCC-eEEecCCHHHHHHHHHHH
Confidence 98 678888999999999999999999989888877 578999999999999988888 899999999999999999
Q ss_pred HhcCCe-------EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---HhcCCCccccccc
Q 001973 299 SALSEK-------LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGAR-LGLNTRVLFNII---TDSGGSSWMFENR 367 (988)
Q Consensus 299 ~~~g~~-------v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~-~Gid~~~~~~~l---~~~~~~s~~~~~~ 367 (988)
+.++.+ +.+ +|+.|.+.++|+++|.+.+.++.+++|++.++++ .|++++++.+++ +.+...|+.+...
T Consensus 169 ~~~g~~~~dGe~~v~~-~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~ 247 (480)
T 2zyd_A 169 TKIAAVAEDGEPCVTY-IGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDIT 247 (480)
T ss_dssp HHHSCBCTTSCBSBCC-CBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHH
T ss_pred HHHhccccCCCceEEE-ECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHH
Confidence 999987 566 5889999999999999999999999999999999 699999999888 4566788888877
Q ss_pred cccccCCCCCCCchhhHHH-----HHHH-HHHHHHHhCCCCchHHHHH
Q 001973 368 VPHMLDNDYTPYSALDIFV-----KDMG-IIARECLSQRVPLHISTIA 409 (988)
Q Consensus 368 ~~~~~~~~~~~~~~l~~~~-----kDl~-~~~~~a~~~gi~~pi~~a~ 409 (988)
.+.+.++++.+++.++.+. |+.+ ++.+.+++.|+++|++..+
T Consensus 248 ~~~l~~~d~~~~~~v~~i~D~~~~k~tG~~~~~~A~~~gv~~Pi~~~a 295 (480)
T 2zyd_A 248 KDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITES 295 (480)
T ss_dssp HHHHHCBCTTSSBGGGGBCCCCCCCSCTTHHHHHHHHHTCCCHHHHHH
T ss_pred HHHHhcCCCCCcchHHHHHHHhcCchHHHHHHHHHHHcCCCCchHHHH
Confidence 7767777886678888765 4444 7889999999999999875
No 33
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.96 E-value=2.7e-28 Score=284.01 Aligned_cols=282 Identities=15% Similarity=0.110 Sum_probs=233.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-------------------C-CcccCCHHHHhccCcEE
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-------------------G-GLIANSPAEAAKDVGVL 206 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-------------------G-~~~~~s~~e~~~~aDvV 206 (988)
|||+|||+|+||.++|.+|+++||+|++||+++++++.+++. | +..++++.++++++|+|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDvv 80 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDVS 80 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCEE
Confidence 589999999999999999999999999999999999998763 3 45678888889999999
Q ss_pred EEEcCChHH---------HHHHHccccchhhhCCC---CCEEEecCCCCHHH-HHHHHHHHHhcCCCceE-ecCcccCCc
Q 001973 207 VIMVTNEAQ---------AESVLYGDLGAVSALSS---GASIILSSTVSPGF-VSQLERRLQFEGKDLKL-VDAPVSGGV 272 (988)
Q Consensus 207 ~l~vp~~~~---------~~~vl~~~~~i~~~l~~---g~ivId~st~~p~~-~~~l~~~l~~~~~g~~~-ldapv~g~~ 272 (988)
|+|||++.. +++++ +.+.+.+++ +++||++||+.|++ .+.+.+.+.+. .+..+ ++.++.++|
T Consensus 81 iiaVptp~~~~~~~dl~~v~~v~---~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~-~g~~~~~~~~v~~~P 156 (436)
T 1mv8_A 81 FICVGTPSKKNGDLDLGYIETVC---REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDC-SGKKAGVDFGVGTNP 156 (436)
T ss_dssp EECCCCCBCTTSSBCCHHHHHHH---HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHH-HSCCBTTTBEEEECC
T ss_pred EEEcCCCcccCCCcchHHHHHHH---HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHh-cCcccCCcEEEEECc
Confidence 999999875 77777 678888888 99999999999998 77777777652 13344 566777788
Q ss_pred ccccCCCe--------EEEEeCC-HHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 001973 273 KRASMGEL--------TIMAAGT-EESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARL 343 (988)
Q Consensus 273 ~~a~~g~l--------~~~~gg~-~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~ 343 (988)
.....|.. .+++|++ ++..+.++++++.++.++++ ++++.+++.|++.|.+.++++++++|+..+|++.
T Consensus 157 e~~~~G~~~~~~~~~~~iv~G~~~~~~~~~~~~l~~~~~~~v~~--~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~ 234 (436)
T 1mv8_A 157 EFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEIYRELDAPIIR--KTVEVAEMIKYTCNVWHAAKVTFANEIGNIAKAV 234 (436)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHHTTSSSCEEE--EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccccchhccCCCEEEEEcCCHHHHHHHHHHHhccCCCEEc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888876 5777775 88899999999999987654 5899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCcccccccccccc--CCCCCC--CchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHc
Q 001973 344 GLNTRVLFNIITDSGGSSWMFENRVPHML--DNDYTP--YSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAA 419 (988)
Q Consensus 344 Gid~~~~~~~l~~~~~~s~~~~~~~~~~~--~~~~~~--~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~ 419 (988)
|+|++++.+.++... ++. .+.+.+ +|...++.||+.++.+.++++|+++|++++++++++...+.
T Consensus 235 Gid~~~v~~~~~~~~-----------r~~~~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~g~~~pl~~~v~~in~~~~~~ 303 (436)
T 1mv8_A 235 GVDGREVMDVICQDH-----------KLNLSRYYMRPGFAFGGSCLPKDVRALTYRASQLDVEHPMLGSLMRSNSNQVQK 303 (436)
T ss_dssp TSCHHHHHHHHTTCT-----------TTTTSSTTCSCCSCCCSSSHHHHHHHHHHHHHHTTCCCTTGGGHHHHHHHHHHH
T ss_pred CCCHHHHHHHhcCCC-----------CCCCcccCCCCcccccCcCcHhhHHHHHHHHHHcCCCcHHHHHHHHHHhHhHHH
Confidence 999999999887422 111 223333 56777899999999999999999999999999998877665
Q ss_pred CCCCCChHHHHHHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 420 GWGRQDDAAVVKVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 420 g~g~~d~~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
+++.+.+. .| ++...||..||++++|
T Consensus 304 ---------~~~~~~~~-----~~--------~~v~vlGlafK~~~~d 329 (436)
T 1mv8_A 304 ---------AFDLITSH-----DT--------RKVGLLGLSFKAGTDD 329 (436)
T ss_dssp ---------HHHHHTTS-----SC--------CEEEEECCSSSTTCCC
T ss_pred ---------HHHHHHHh-----cC--------CEEEEEccccCCCCCc
Confidence 55555433 33 5567788888888888
No 34
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.96 E-value=5.4e-28 Score=276.01 Aligned_cols=288 Identities=20% Similarity=0.174 Sum_probs=224.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc--------------------CCcccCCHHHHhccCcE
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV--------------------GGLIANSPAEAAKDVGV 205 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~--------------------G~~~~~s~~e~~~~aDv 205 (988)
|.+|+|||+|+||.++|..|++.||+|+++|+++++++.+++. ...+++++.++++.+|+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ad~ 100 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAATDA 100 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTSSE
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcCCc
Confidence 4699999999999999999999999999999999999988752 13467889999999999
Q ss_pred EEEEcCChH---------HHHHHHccccchhhhCC---CCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcc
Q 001973 206 LVIMVTNEA---------QAESVLYGDLGAVSALS---SGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVK 273 (988)
Q Consensus 206 V~l~vp~~~---------~~~~vl~~~~~i~~~l~---~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~ 273 (988)
+|+|||+|. .++.+. +.+.++++ ++++||..||+.|++++++...+.++..+ -.+..+..+|+
T Consensus 101 ~~I~VpTP~~~d~~~Dl~~v~~a~---~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~--~~~f~v~~~PE 175 (444)
T 3vtf_A 101 TFIAVGTPPAPDGSADLRYVEAAA---RAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAG--GVKFSVASNPE 175 (444)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHH---HHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTT--TCCCEEEECCC
T ss_pred eEEEecCCCCCCCCCCcHHHHHHH---HHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCC--CCCceeecCcc
Confidence 999999873 344544 56666664 68999999999999999876554332111 12233344445
Q ss_pred cccCCCe--------EEEEe-CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 001973 274 RASMGEL--------TIMAA-GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLG 344 (988)
Q Consensus 274 ~a~~g~l--------~~~~g-g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~G 344 (988)
+..+|.. .+++| .++++.+.+..+++.+...++++ ++..|++.|++.|.+.++++++++|+..+|++.|
T Consensus 176 rl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~~~~~~--~~~~AE~~Kl~eN~~ravnIa~~NEla~ice~~G 253 (444)
T 3vtf_A 176 FLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDAPKLVM--KPREAELVKYASNVFLALKISFANEVGLLAKRLG 253 (444)
T ss_dssp CCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCSCEEEE--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCCCEEEe--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5555542 14444 56778888999999988877664 8899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCC
Q 001973 345 LNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQ 424 (988)
Q Consensus 345 id~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~ 424 (988)
+|..++.+.++.....++.+-+ | .+|+.-.|+.||..++...+++.|+++++++++.++++.....
T Consensus 254 iDv~eV~~a~~~d~rig~~~l~--P-------G~G~GG~CipkD~~~L~~~a~~~g~~~~li~a~~~iN~~~~~~----- 319 (444)
T 3vtf_A 254 VDTYRVFEAVGLDKRIGRHYFG--A-------GLGFGGSCFPKDTLAFIRFGESLGLEMAISKAVLRVNEYMPRY----- 319 (444)
T ss_dssp CCHHHHHHHHHTSTTSCSTTCC--C-------SSCCCTTTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH-----
T ss_pred CCHHHHHHHhccCCCCCCCCCC--C-------CCCCCCcccCcCHHHHHHHHHhcCCCHHHHHhhHHHHHHHHHH-----
Confidence 9999999998754433222111 1 2345567888999999999999999999999999999887665
Q ss_pred ChHHHHHHHHHhhCccccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 425 DDAAVVKVYETLSGVKVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 425 d~~a~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
+++.+.+..+ .+.| ++...||..||++++|
T Consensus 320 ----vv~~l~~~~~-~l~g--------~~V~vlGlafK~~tdD 349 (444)
T 3vtf_A 320 ----AVQLLEERLG-GLRG--------RHVGVLGLAFKPNTDD 349 (444)
T ss_dssp ----HHHHHHHHHT-CCTT--------CEEEEECCSSSSSCCC
T ss_pred ----HHHHHHHHcc-ccCC--------CEEEEEeeecCCCCCc
Confidence 7777776654 4556 5677888888888888
No 35
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.96 E-value=9.1e-28 Score=276.09 Aligned_cols=281 Identities=15% Similarity=0.159 Sum_probs=227.6
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCC------------------cccCCHHHHhccCcEEEE
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGG------------------LIANSPAEAAKDVGVLVI 208 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~------------------~~~~s~~e~~~~aDvV~l 208 (988)
|||+|||+|+||.++|.+|++ ||+|++|||++++++.+++.+. ..++++.++++++|+||+
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 589999999999999999999 9999999999999999987765 345678888999999999
Q ss_pred EcCChH----------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCC
Q 001973 209 MVTNEA----------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMG 278 (988)
Q Consensus 209 ~vp~~~----------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g 278 (988)
|||++. .+++++ +.+.+ +.++++||++||+.|++++++.+.+.+ . .++.+|.+..+..+..+
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~---~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~---~-~v~~~Pe~~~~G~a~~~ 151 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVI---KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT---D-RIIFSPEFLRESKALYD 151 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHH---HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC---S-CEEECCCCCCTTSTTHH
T ss_pred ecCCCcccCCCCccHHHHHHHH---HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC---C-eEEECCccccCcchhhc
Confidence 999984 578887 57777 889999999999999999999887654 1 66778877666554322
Q ss_pred Ce---EEEEeCCH-------HHHHHHHHHHHh-cCC-e-EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 001973 279 EL---TIMAAGTE-------ESLKSTGSVLSA-LSE-K-LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGL 345 (988)
Q Consensus 279 ~l---~~~~gg~~-------~~~~~~~~ll~~-~g~-~-v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gi 345 (988)
.+ .+++|++. +..+.+.++|.. ... + +++ .++++.+++.|+++|++.++++++++|+..+|++.|+
T Consensus 152 ~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gi 230 (402)
T 1dlj_A 152 NLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVL-IMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKL 230 (402)
T ss_dssp HHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEE-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEE-ecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 22 27778876 667778888865 332 2 344 4789999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCccccccccccccCCCCCC--CchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCC
Q 001973 346 NTRVLFNIITDSGGSSWMFENRVPHMLDNDYTP--YSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGR 423 (988)
Q Consensus 346 d~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~--~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~ 423 (988)
|++++.++++.+... .+ ..+.| +|...++.||+.++...++ |+++|+++++.++++.....
T Consensus 231 d~~~v~~~~~~~~ri-------~~----~~~~pg~g~gg~c~~kD~~~l~~~a~--~~~~~l~~~~~~~N~~~~~~---- 293 (402)
T 1dlj_A 231 NSHMIIQGISYDDRI-------GM----HYNNPSFGYGGYSLPKDTKQLLANYN--NIPQTLIEAIVSSNNVRKSY---- 293 (402)
T ss_dssp CHHHHHHHHHTSTTT-------CS----SSCCCCSSCCSSHHHHHHHHHHHHHT--TSSCSHHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHhccCCCC-------Cc----CCCCCCCccCCccHHhhHHHHHHHhc--CCChHHHHHHHHHHHHhHHH----
Confidence 999999999865521 11 11234 5778899999999998884 89999999999999988776
Q ss_pred CChHHHHHHHHHhhCc-cccCCCCcchhhhhhccCCCCCCCCchh
Q 001973 424 QDDAAVVKVYETLSGV-KVEGRLPVLKKEAVLQSLPSEWPLDPID 467 (988)
Q Consensus 424 ~d~~a~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (988)
+++.+.+..+- .+.| ++...||..||++++|
T Consensus 294 -----~~~~~~~~~~~~~~~~--------~~v~vlGlafK~~~~d 325 (402)
T 1dlj_A 294 -----IAKQIINVLKEQESPV--------KVVGVYRLIMKSNSDN 325 (402)
T ss_dssp -----HHHHHHHHHTTSCCSS--------CEEEEECCCSSTTCSC
T ss_pred -----HHHHHHHHhhhcCCCC--------CEEEEEeeeccCCCcc
Confidence 77777666543 4555 5677888888888888
No 36
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.96 E-value=3.8e-28 Score=285.57 Aligned_cols=264 Identities=20% Similarity=0.219 Sum_probs=233.1
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----cCCcccCCHHHHhc---cCcEEEEEcCChHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-----VGGLIANSPAEAAK---DVGVLVIMVTNEAQAES 218 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----~G~~~~~s~~e~~~---~aDvV~l~vp~~~~~~~ 218 (988)
|||+|||+|.||+.||.+|+++||+|++|||++++++.+.+ .|+..+++++++++ ++|+||+|||++..++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v~~ 82 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHHHH
Confidence 58999999999999999999999999999999999999987 67888889999875 89999999999878999
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHH
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVL 298 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll 298 (988)
++ +++.+.+.++++||+++++.+..+.++.+.+.+ .+++|+++|+++++..+..|. .+++||+++.++.++++|
T Consensus 83 vl---~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~--~g~~~v~~pv~g~~~~a~~g~-~i~~gg~~e~~~~v~~ll 156 (482)
T 2pgd_A 83 FI---EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKD--KGILFVGSGVSGGEDGARYGP-SLMPGGNKEAWPHIKAIF 156 (482)
T ss_dssp HH---HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHH--TTCEEEEEEEESHHHHHHHCC-EEEEEECTTTHHHHHHHH
T ss_pred HH---HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHH--cCCeEeCCCCCCChhhhccCC-eEEeCCCHHHHHHHHHHH
Confidence 98 578888999999999999999988888888876 578999999999999888888 779999999999999999
Q ss_pred HhcCCeE-------EEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHH---hcCCCccccccc
Q 001973 299 SALSEKL-------YVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARL-GLNTRVLFNIIT---DSGGSSWMFENR 367 (988)
Q Consensus 299 ~~~g~~v-------~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~-Gid~~~~~~~l~---~~~~~s~~~~~~ 367 (988)
+.++.++ .+ +|+.|.++++|+++|.+.++++.+++|++.++++. |++++++.+++. .+...|+.++..
T Consensus 157 ~~~g~~v~d~~~~~~~-~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~g~~~S~l~~~~ 235 (482)
T 2pgd_A 157 QGIAAKVGTGEPCCDW-VGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEIT 235 (482)
T ss_dssp HHHSCBCTTSCBSCCC-CEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHH
T ss_pred HHhhhhccCCCcceEE-ECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcCCCcCchHHHHH
Confidence 9999876 45 57899999999999999999999999999999999 999999999985 455778887777
Q ss_pred cccccCCCCCCCchhhHH------HHHHHHHHHHHHhCCCCchHHH-HHHHHHHHHH
Q 001973 368 VPHMLDNDYTPYSALDIF------VKDMGIIARECLSQRVPLHIST-IAHQLFLAGS 417 (988)
Q Consensus 368 ~~~~~~~~~~~~~~l~~~------~kDl~~~~~~a~~~gi~~pi~~-a~~~~~~~a~ 417 (988)
.+.+..+++.+++.++.+ .++.+++.+.|+++|+|+|++. ++++.+....
T Consensus 236 ~~~l~~~d~~~~~~ld~i~d~~~~k~t~~~~~~~A~~~Gv~~P~i~~av~~~~~s~~ 292 (482)
T 2pgd_A 236 ASILKFQDADGKHLLPKIRDSAGQKGTGKWTAISALEYGVPVTLIGEAVFARCLSSL 292 (482)
T ss_dssp HHHHHCBCTTSSBSGGGSCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHC
T ss_pred hHHhhccCCCCCeeecccccccccccHHHHHHHHHHHcCCCcchHHHHHHHHhhhhh
Confidence 666777788777877766 3667789999999999999995 6777665543
No 37
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.96 E-value=2.6e-28 Score=265.49 Aligned_cols=255 Identities=19% Similarity=0.201 Sum_probs=215.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeC--ChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDV--YRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr--~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
|||+|||+|+||..||.+|+++||+|++||| +++..+.+.+.|+. +++.++++++|+||+|||++...+.+.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~~---- 74 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAAR---- 74 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHHH----
T ss_pred CeEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHHH----
Confidence 5899999999999999999999999999999 78888888888877 788888999999999999987676652
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCe
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEK 304 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~ 304 (988)
++.+.+++ +||++|++.|.+.+.+.+.+.+ .+ |+++|+++++..+..|.. ++++|+.+ +.+++ |+.+|++
T Consensus 75 ~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~--~g--~~~~~v~~~~~~~~~g~~-~~~~g~~~--~~~~~-l~~~g~~ 144 (264)
T 1i36_A 75 RAGRHVRG--IYVDINNISPETVRMASSLIEK--GG--FVDAAIMGSVRRKGADIR-IIASGRDA--EEFMK-LNRYGLN 144 (264)
T ss_dssp HHHTTCCS--EEEECSCCCHHHHHHHHHHCSS--SE--EEEEEECSCHHHHGGGCE-EEEESTTH--HHHHG-GGGGTCE
T ss_pred HHHHhcCc--EEEEccCCCHHHHHHHHHHHhh--CC--eeeeeeeCCccccccCCe-EEecCCcH--HHhhh-HHHcCCe
Confidence 56666655 9999999999999899888765 34 889999999988888887 88888776 88899 9999999
Q ss_pred EEEEeCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccccccccccCCCCCCCchhh
Q 001973 305 LYVIKGG-CGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALD 383 (988)
Q Consensus 305 v~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~ 383 (988)
++++ ++ +|.+.++|+++|++.+.++.+++|++.++++.|++++ +.+.+..+.+.++.. ..+.+..+++.++++
T Consensus 145 ~~~~-~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~g~~~~~--~~~~~~~~~~~~g~~-- 218 (264)
T 1i36_A 145 IEVR-GREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTEGNDFRE--SAISRLKSSCIHARR-- 218 (264)
T ss_dssp EEEC-SSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTSCSSTHH--HHHHHHHHHHHTHHH--
T ss_pred eEEC-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhcCccHHH--HHHHHhcCCCCcchh--
Confidence 8885 55 8999999999999999999999999999999999987 778888765555542 344566677777776
Q ss_pred HHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCC
Q 001973 384 IFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQD 425 (988)
Q Consensus 384 ~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d 425 (988)
+.||++.+.++++++ +++|+.++++++++++.+.|++.+|
T Consensus 219 -~~~~~~~~~~~a~~~-v~~p~~~~v~~~~~~~~~~~~~~~~ 258 (264)
T 1i36_A 219 -RYEEMKEVQDMLAEV-IDPVMPTCIIRIFDKLKDVKVSADA 258 (264)
T ss_dssp -HHHHHHHHHHHHHTT-SCCSHHHHHHHHHHHHCC------G
T ss_pred -hHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHcCCChhh
Confidence 689999999999999 9999999999999999988776554
No 38
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.95 E-value=6.7e-28 Score=282.91 Aligned_cols=257 Identities=20% Similarity=0.267 Sum_probs=226.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc----CCcccCCHHHHhcc---CcEEEEEcCChHHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV----GGLIANSPAEAAKD---VGVLVIMVTNEAQAES 218 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~----G~~~~~s~~e~~~~---aDvV~l~vp~~~~~~~ 218 (988)
+++|||||+|.||..||.+|+++||+|++|||++++++.+.+. |+..+++++++++. +|+||+|||++..++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~~ 84 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATDA 84 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHHH
Confidence 3689999999999999999999999999999999999998875 77788899998876 9999999999888899
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHH
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVL 298 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll 298 (988)
++ +++.+.+.+|++||+++++.+..+.++.+.+.+ .+++|+++|+++++..+..|. .+++||+++.++.++++|
T Consensus 85 vl---~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~--~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll 158 (474)
T 2iz1_A 85 TI---KSLLPLLDIGDILIDGGNTHFPDTMRRNAELAD--SGINFIGTGVSGGEKGALLGP-SMMPGGQKEAYDLVAPIF 158 (474)
T ss_dssp HH---HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTT--SSCEEEEEEECSHHHHHHHCC-CEEEEECHHHHHHHHHHH
T ss_pred HH---HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHH--CCCeEECCCCCCChhhhccCC-eEEecCCHHHHHHHHHHH
Confidence 88 578888999999999999999988888887765 578999999999999888888 678899999999999999
Q ss_pred HhcCCe--------EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHH---hcCCCcccccc
Q 001973 299 SALSEK--------LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGAR-LGLNTRVLFNIIT---DSGGSSWMFEN 366 (988)
Q Consensus 299 ~~~g~~--------v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~-~Gid~~~~~~~l~---~~~~~s~~~~~ 366 (988)
+.++.+ +.+ .|+.|.+.++|+++|.+.++++.+++|++.++++ .|++++++.+++. .+...|+..+.
T Consensus 159 ~~~g~~~~~dge~~~~~-~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~ 237 (474)
T 2iz1_A 159 EQIAAKAPQDGKPCVAY-MGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEI 237 (474)
T ss_dssp HHHSCBCTTTCCBSBCC-CBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHH
T ss_pred HHHhcccccCCCceEEE-ECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHHh
Confidence 999987 455 5889999999999999999999999999999999 7999999998885 35567787777
Q ss_pred ccccccCCCCCCC-chhhHHH-----HHHH-HHHHHHHhCCCCchHHHHH
Q 001973 367 RVPHMLDNDYTPY-SALDIFV-----KDMG-IIARECLSQRVPLHISTIA 409 (988)
Q Consensus 367 ~~~~~~~~~~~~~-~~l~~~~-----kDl~-~~~~~a~~~gi~~pi~~a~ 409 (988)
..+.+..+|+.++ +.++.+. |+.+ +..+.++++|+++|++..+
T Consensus 238 ~~~~l~~~d~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~gv~~P~~~~a 287 (474)
T 2iz1_A 238 TKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESALDLGVPLPLITES 287 (474)
T ss_dssp HHHHTTCBCSSSSSBGGGGBCSCCCCCSHHHHHHHHHHHHTCCCHHHHHH
T ss_pred hhhHhhcCCCCCChhHHHHHHHhhcccchHHHHHHHHHHcCCCCchHHHH
Confidence 6666677788776 8888665 6666 7889999999999999875
No 39
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.95 E-value=2.3e-27 Score=278.22 Aligned_cols=262 Identities=19% Similarity=0.215 Sum_probs=226.9
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-C-------CcccCCHHHHhcc---CcEEEEEcCChHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-G-------GLIANSPAEAAKD---VGVLVIMVTNEAQ 215 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G-------~~~~~s~~e~~~~---aDvV~l~vp~~~~ 215 (988)
|||||||+|.||+.+|.+|+++||+|++|||++++++.+.+. | +..+++++++++. +|+||+|||++..
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~~ 81 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAA 81 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChHH
Confidence 589999999999999999999999999999999999998875 5 5678899998874 9999999999877
Q ss_pred HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHH
Q 001973 216 AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTG 295 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~ 295 (988)
++.++ +++.+.+.++++||+++++.+..+.++.+.+.+ .+++|+++|+++++..+..|. .+++||+++.++.++
T Consensus 82 v~~vl---~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~--~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~ 155 (478)
T 1pgj_A 82 TDSTI---EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEA--AGLRFLGMGISGGEEGARKGP-AFFPGGTLSVWEEIR 155 (478)
T ss_dssp HHHHH---HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHT--TTCEEEEEEEESHHHHHHHCC-EEEEEECHHHHHHHH
T ss_pred HHHHH---HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHH--CCCeEEEeeccCCHHHHhcCC-eEeccCCHHHHHHHH
Confidence 89888 678888999999999999999988888888876 578999999999998888888 788899999999999
Q ss_pred HHHHhcCCe-------EEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH----hcCCCcccc
Q 001973 296 SVLSALSEK-------LYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIIT----DSGGSSWMF 364 (988)
Q Consensus 296 ~ll~~~g~~-------v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~----~~~~~s~~~ 364 (988)
++|+.++.+ +++ .|+.|.++++|+++|.+.++++.+++|++.++++.|++++++.+++. .+...|+.+
T Consensus 156 ~ll~~~g~~~~dg~~~v~~-~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~ 234 (478)
T 1pgj_A 156 PIVEAAAAKADDGRPCVTM-NGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYML 234 (478)
T ss_dssp HHHHHHSCBCTTSCBSCCC-CCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHH
T ss_pred HHHHHhcccccCCCeeEEE-eCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHH
Confidence 999999987 555 58899999999999999999999999999999999999999999887 566778877
Q ss_pred ccccccccCCCCCCCchhhHHH-----HHH-HHHHHHHHhCCCCchHHHH-HHHHHHH
Q 001973 365 ENRVPHMLDNDYTPYSALDIFV-----KDM-GIIARECLSQRVPLHISTI-AHQLFLA 415 (988)
Q Consensus 365 ~~~~~~~~~~~~~~~~~l~~~~-----kDl-~~~~~~a~~~gi~~pi~~a-~~~~~~~ 415 (988)
+...+.+..+++.+.+.++.+. |+. +++.+.++++|+++|+++. ++..+..
T Consensus 235 ~~~~~~l~~~d~~G~~~ld~i~D~~~~kgtg~~~~~~A~~~Gv~~Pi~~~av~~r~ls 292 (478)
T 1pgj_A 235 DISIAAARAKDKDGSYLTEHVMDRIGSKGTGLWSAQEALEIGVPAPSLNMAVVSRQFT 292 (478)
T ss_dssp HHHHHHHHCBCTTSSBGGGGBCCCCCCCSHHHHHHHHHHHHTCCCHHHHHHHHHHHHH
T ss_pred HhhchhhhcCCCCChhHHHHHHHHhcCccHHHHHHHHHHHhCCCChHHHHHHHHHHHh
Confidence 7666656566773237777766 444 6999999999999999988 4434433
No 40
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.92 E-value=5.5e-25 Score=248.13 Aligned_cols=265 Identities=13% Similarity=0.103 Sum_probs=206.5
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcC--------------CcccCCHHHHhccCcEEEEE
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVG--------------GLIANSPAEAAKDVGVLVIM 209 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G--------------~~~~~s~~e~~~~aDvV~l~ 209 (988)
+++|||+|||+|+||+++|..|+++||+|++|||++++++.+++.| +.+++++.++++++|+||+|
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVila 106 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIV 106 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEEC
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEEC
Confidence 3457999999999999999999999999999999999999998764 23567899999999999999
Q ss_pred cCChHHHHHHHccccchhhhCCCCCEEEecCC-CCHHHHHHHHHHHHhc--CCCceEecCcccCCcccccCCCeEEEEeC
Q 001973 210 VTNEAQAESVLYGDLGAVSALSSGASIILSST-VSPGFVSQLERRLQFE--GKDLKLVDAPVSGGVKRASMGELTIMAAG 286 (988)
Q Consensus 210 vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st-~~p~~~~~l~~~l~~~--~~g~~~ldapv~g~~~~a~~g~l~~~~gg 286 (988)
||.. .+++++ +++.+.++++++||++++ ..+++ +.+.+.+.+. ...+.++.+|.+.........+..++.+.
T Consensus 107 Vp~~-~~~~vl---~~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~~ 181 (356)
T 3k96_A 107 VPSF-AFHEVI---TRMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASN 181 (356)
T ss_dssp CCHH-HHHHHH---HHHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEES
T ss_pred CCHH-HHHHHH---HHHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEecC
Confidence 9975 588888 688888999999999876 45544 4444444331 13456788887776666666677778888
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEeCCc-----------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Q 001973 287 TEESLKSTGSVLSALSEKLYVIKGGC-----------------GAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRV 349 (988)
Q Consensus 287 ~~~~~~~~~~ll~~~g~~v~~~~g~~-----------------g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~ 349 (988)
+.+..+.++++|+..+.++++ .+++ |.+..+|+.+|...+++..+++|+.+++++.|+++++
T Consensus 182 ~~~~~~~v~~lf~~~~~rv~~-~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t 260 (356)
T 3k96_A 182 NSQFSKDLIERLHGQRFRVYK-NDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQET 260 (356)
T ss_dssp CHHHHHHHHHHHCCSSEEEEE-ESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred CHHHHHHHHHHhCCCCeeEEE-eCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHh
Confidence 999999999999999988877 4663 5566678889999999999999999999999999999
Q ss_pred HHHHHHhc----CCCcccccccccc-ccCCCCCCC------chhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHH
Q 001973 350 LFNIITDS----GGSSWMFENRVPH-MLDNDYTPY------SALDIFVKDMGIIARECLSQRVPLHISTIAHQLFL 414 (988)
Q Consensus 350 ~~~~l~~~----~~~s~~~~~~~~~-~~~~~~~~~------~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~ 414 (988)
+.++...+ +++|..++|+.-+ .+.+.+... ..+....++.+.+.++++++|+++|+++++++++.
T Consensus 261 ~~gl~g~gDl~~tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~eG~~t~~~~~~la~~~~v~~Pi~~~v~~il~ 336 (356)
T 3k96_A 261 LTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILH 336 (356)
T ss_dssp HTSTTTHHHHHHHHHCTTCHHHHHHHHHHHTCCHHHHHHHHCSCCSHHHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred hcccchhhHHHHhccCCCCccHHHHHHHHCCCCHHHHHHHcCCccchHHHHHHHHHHHHHcCCCCcHHHHHHHHHh
Confidence 98753332 2455556655332 111111110 13346778889999999999999999999999986
No 41
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.87 E-value=7.1e-22 Score=220.06 Aligned_cols=264 Identities=14% Similarity=0.116 Sum_probs=192.3
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccC------------CHHHHhc---cCcEEEEEcC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIAN------------SPAEAAK---DVGVLVIMVT 211 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~------------s~~e~~~---~aDvV~l~vp 211 (988)
|||+|||+|.||+.+|..|+++||+|++|||++++.+.+.+.|..... +..++.+ ++|+||+|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~ 83 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIALTK 83 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEECSC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEEec
Confidence 699999999999999999999999999999999999999887754321 3444444 8999999999
Q ss_pred ChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcC--CCceEecCcccCC--cccccCCCeEEEE--e
Q 001973 212 NEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEG--KDLKLVDAPVSGG--VKRASMGELTIMA--A 285 (988)
Q Consensus 212 ~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~--~g~~~ldapv~g~--~~~a~~g~l~~~~--g 285 (988)
.. .+++++ +.+.+.+.++++||++++..+ ..+.+.+.++... .+..+..++..+. +.....|.+.+.. +
T Consensus 84 ~~-~~~~v~---~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~ 158 (316)
T 2ew2_A 84 AQ-QLDAMF---KAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDP 158 (316)
T ss_dssp HH-HHHHHH---HHHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSG
T ss_pred cc-cHHHHH---HHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCC
Confidence 65 578887 578888889999999987543 3344554443310 0233444555442 2234456655543 4
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHcC
Q 001973 286 GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLL---------------------AGVHIASAAEAMAFGARLG 344 (988)
Q Consensus 286 g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~---------------------~~~~~~~~~Ea~~la~~~G 344 (988)
++++.++.++++|+.+|.++++ .++++.+.+.|++.|.. ..++..++.|+..++++.|
T Consensus 159 ~~~~~~~~~~~ll~~~g~~~~~-~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~~G 237 (316)
T 2ew2_A 159 SGKKFALEVVDVFQKAGLNPSY-SSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEA 237 (316)
T ss_dssp GGHHHHHHHHHHHHHTTCCEEE-CTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHhCCCCcEE-chhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHHcC
Confidence 5788899999999999998877 68999999999999964 2567788999999999999
Q ss_pred CCH--HHHHHHHHhcCCCccccccccccccCCCC-CCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHc
Q 001973 345 LNT--RVLFNIITDSGGSSWMFENRVPHMLDNDY-TPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAA 419 (988)
Q Consensus 345 id~--~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~ 419 (988)
+++ +.+.+.+..........+++ +.+. .|+ ..++..+ +.++++++.++++++|+++|+++.++++++.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~-~sm~-~d~~~~g~~~E-~~~~~~~~~~~a~~~gv~~P~~~~~~~~~~~~~~~ 312 (316)
T 2ew2_A 238 IYLDQAEVYTHIVQTYDPNGIGLHY-PSMY-QDLIKNHRLTE-IDYINGAVWRKGQKYNVATPFCAMLTQLVHGKEEL 312 (316)
T ss_dssp CCCCHHHHHHHHHHTTCTTTTTTSC-CHHH-HHHTTTCCCCS-GGGTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHhccccCCCCC-cHHH-HHHHHcCCcch-HHHHhhHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Confidence 986 56667665422111001111 1111 223 3344444 67999999999999999999999999999887653
No 42
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.86 E-value=4.8e-22 Score=223.62 Aligned_cols=266 Identities=14% Similarity=0.082 Sum_probs=188.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcC-----------CcccCCHHHHhccCcEEEEEcCChH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVG-----------GLIANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G-----------~~~~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
.|||+|||+|+||++||.+|+++||+|++|||++++++.+++.| +..++++.+ ++.+|+||+|||+ .
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~-~ 91 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV-Q 91 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG-G
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH-H
Confidence 36999999999999999999999999999999999999998876 456778888 8899999999996 6
Q ss_pred HHHHHHccccchhhhCCCCCEEEecC-CCCHHHHHHHHHHHHhcCCCceEecCcccCCccccc---CCCeE-EEEeCCHH
Q 001973 215 QAESVLYGDLGAVSALSSGASIILSS-TVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRAS---MGELT-IMAAGTEE 289 (988)
Q Consensus 215 ~~~~vl~~~~~i~~~l~~g~ivId~s-t~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~---~g~l~-~~~gg~~~ 289 (988)
++++++ .++.+ ++++||+++ ++.+.+.+.+++.+.+.. + .++++..+|..+. .|... +..++++
T Consensus 92 ~~~~v~---~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~-~---~~~~~~~~P~~~~~~~~g~~~~~~~g~~~- 160 (335)
T 1z82_A 92 YIREHL---LRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEIL-G---CPYAVLSGPSHAEEVAKKLPTAVTLAGEN- 160 (335)
T ss_dssp GHHHHH---TTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHT-C---CCEEEEESSCCHHHHHTTCCEEEEEEETT-
T ss_pred HHHHHH---HHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHc-C---CceEEEECCccHHHHhCCCceEEEEEehh-
Confidence 688888 34444 789999998 466766666777776532 2 2345555555443 45533 3334433
Q ss_pred HHHHHHHHHHhcCCeEEEEeCCcchH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 001973 290 SLKSTGSVLSALSEKLYVIKGGCGAG-----------------SGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFN 352 (988)
Q Consensus 290 ~~~~~~~ll~~~g~~v~~~~g~~g~a-----------------~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~ 352 (988)
++.++++|+..+.++++ .+++-.. ..+|+.+|.+.+.+..++.|+..++++.|++++++.+
T Consensus 161 -~~~~~~ll~~~g~~~~~-~~di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~ 238 (335)
T 1z82_A 161 -SKELQKRISTEYFRVYT-CEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMG 238 (335)
T ss_dssp -HHHHHHHHCCSSEEEEE-ESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTS
T ss_pred -HHHHHHHhCCCCEEEEe-cCchHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcc
Confidence 78999999999988776 4664322 3344556777778889999999999999999988765
Q ss_pred HHHhc----CCCccccccc--cccccCCCCCC------CchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcC
Q 001973 353 IITDS----GGSSWMFENR--VPHMLDNDYTP------YSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAG 420 (988)
Q Consensus 353 ~l~~~----~~~s~~~~~~--~~~~~~~~~~~------~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g 420 (988)
+...+ +..++..+++ .+.+..+ +.. .++.....||++++.++++++|+++|+.++++++++.
T Consensus 239 l~~~~~~~~t~~s~~~~n~~~~~~~~~g-~~~~~~~~~~g~~~e~~~~~~~v~~~a~~~gv~~P~~~~v~~~~~~----- 312 (335)
T 1z82_A 239 LAGIGDLMVTCNSRYSRNRRFGELIARG-FNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYE----- 312 (335)
T ss_dssp TTTHHHHHHHHHCTTCHHHHHHHHHHHT-CCHHHHHHTCSSCCTHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHS-----
T ss_pred cccccceeeeccCccCcHHHHHHHHhCC-CCHHHHHHhcCCeeeHHHHHHHHHHHHHHhCCCCcHHHHHHHHHhC-----
Confidence 32110 0112222221 1111111 110 1223356799999999999999999999999998853
Q ss_pred CCCCChHHHHHHHH
Q 001973 421 WGRQDDAAVVKVYE 434 (988)
Q Consensus 421 ~g~~d~~a~~~~~~ 434 (988)
..+...+++.+.
T Consensus 313 --~~~~~~~~~~l~ 324 (335)
T 1z82_A 313 --GKPPLQSMRDLM 324 (335)
T ss_dssp --CCCHHHHHHHHH
T ss_pred --CCCHHHHHHHHH
Confidence 334445555443
No 43
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.86 E-value=4.8e-22 Score=226.51 Aligned_cols=263 Identities=11% Similarity=0.033 Sum_probs=184.9
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcC--------------CcccCCHHHHhccCcEEEEEcCC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVG--------------GLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G--------------~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
|||+|||+|+||.++|.+|+++||+|++|||++++++.+.+.+ +..++++.++++++|+||+|||+
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~ 95 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT 95 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh
Confidence 3999999999999999999999999999999999999888753 34567888989999999999996
Q ss_pred hHHHHHHHcc-ccchhhhCCC-CCEEEecC-CCCHHHHHHHHHHHHhcCCCceEecCcccCCcccc-----cCCCeEEEE
Q 001973 213 EAQAESVLYG-DLGAVSALSS-GASIILSS-TVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRA-----SMGELTIMA 284 (988)
Q Consensus 213 ~~~~~~vl~~-~~~i~~~l~~-g~ivId~s-t~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a-----~~g~l~~~~ 284 (988)
..+++++.. +.++.+.+.+ +++||+++ +..+.+.+.+.+.+.+.. +.+ ..++..+|..+ ......++.
T Consensus 96 -~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~-~~~--~~~v~~gp~~~~~~~~g~~~~~~~~ 171 (366)
T 1evy_A 96 -QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFL-PSP--LLSVLAGPSFAIEVATGVFTCVSIA 171 (366)
T ss_dssp -HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTS-CGG--GEEEEESSCCHHHHHTTCCEEEEEE
T ss_pred -HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHC-CCC--cEEEEeCCChHHHHHhCCceEEEEe
Confidence 668888731 1117777777 89999998 566665555666665421 221 12233344332 223345566
Q ss_pred eCCHHHHHHHHHHHHhc--CCeEEEEeCCcchHHHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 001973 285 AGTEESLKSTGSVLSAL--SEKLYVIKGGCGAGSGV-----------------KMANQLLAGVHIASAAEAMAFGARLGL 345 (988)
Q Consensus 285 gg~~~~~~~~~~ll~~~--g~~v~~~~g~~g~a~~~-----------------Kl~~N~~~~~~~~~~~Ea~~la~~~Gi 345 (988)
+++++.++.++++|+.. +.++++ .+++-...+. |+.+|.+..++..++.|++.++++.|+
T Consensus 172 ~~~~~~~~~v~~ll~~~g~g~~~~~-~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~la~a~Gi 250 (366)
T 1evy_A 172 SADINVARRLQRIMSTGDRSFVCWA-TTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAALGG 250 (366)
T ss_dssp CSSHHHHHHHHHHHSCTTSSEEEEE-ESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHhcCCCCeEEEEE-cCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence 77888999999999999 877776 4665433443 344677778889999999999999999
Q ss_pred CHHHHHHHHHhc----CCCccccccc--cccccCCCCC------CCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Q 001973 346 NTRVLFNIITDS----GGSSWMFENR--VPHMLDNDYT------PYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLF 413 (988)
Q Consensus 346 d~~~~~~~l~~~----~~~s~~~~~~--~~~~~~~~~~------~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~ 413 (988)
+++++.++...+ +..++.++++ .+.+..+ +. ..++...+.||++++.++++++|+++|+++.+++++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~e~~~~~~~v~~~a~~~gv~~P~~~~v~~~~ 329 (366)
T 1evy_A 251 DGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKG-LPIEEIQRTSKAVAEGVATADPLMRLAKQLKVKMPLCHQIYEIV 329 (366)
T ss_dssp CCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHTT-CCHHHHHC---CCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHH
T ss_pred CCccccccccchhheeeecCCCCchHHHHHHHhCC-CCHHHHHHHcCCeeehHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 987765421111 0122222222 1112111 11 012233567999999999999999999999999998
Q ss_pred HH
Q 001973 414 LA 415 (988)
Q Consensus 414 ~~ 415 (988)
+.
T Consensus 330 ~~ 331 (366)
T 1evy_A 330 YK 331 (366)
T ss_dssp HS
T ss_pred HC
Confidence 75
No 44
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.84 E-value=3.4e-21 Score=210.22 Aligned_cols=190 Identities=17% Similarity=0.176 Sum_probs=152.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-------CCcccCCHHHHhccCcEEEEEcCChHHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-------GGLIANSPAEAAKDVGVLVIMVTNEAQAES 218 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-------G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~ 218 (988)
.+||+|||+|.||.+||.+|+ +||+|++||+++++++++.+. +++.++++++ +++||+||.|+|...+++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~ 89 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKV 89 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHH
Confidence 479999999999999999999 999999999999999998877 7777888876 8899999999999999988
Q ss_pred HHccccchhhhCCCCCEEE-ecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeC---CHHHHHHH
Q 001973 219 VLYGDLGAVSALSSGASII-LSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAG---TEESLKST 294 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivI-d~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg---~~~~~~~~ 294 (988)
++++ .+ ..+ ++++++ |+||.+|....+.... +.+..|.||++ |+.. +.++.++.| +++.++++
T Consensus 90 ~l~~--~l-~~~-~~~IlasntSti~~~~~a~~~~~-~~r~~G~Hf~~-Pv~~-------~~lveiv~g~~t~~~~~~~~ 156 (293)
T 1zej_A 90 EVLR--EV-ERL-TNAPLCSNTSVISVDDIAERLDS-PSRFLGVHWMN-PPHV-------MPLVEIVISRFTDSKTVAFV 156 (293)
T ss_dssp HHHH--HH-HTT-CCSCEEECCSSSCHHHHHTTSSC-GGGEEEEEECS-STTT-------CCEEEEEECTTCCHHHHHHH
T ss_pred HHHH--HH-hcC-CCCEEEEECCCcCHHHHHHHhhc-ccceEeEEecC-cccc-------CCEEEEECCCCCCHHHHHHH
Confidence 8863 34 344 888885 7889888754432211 12235788888 5533 335555554 89999999
Q ss_pred HHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcc
Q 001973 295 GSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSW 362 (988)
Q Consensus 295 ~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~ 362 (988)
.++++.+|++++++ ++. |++||++. .+++|++.++++ |++++++.+++..+.+.++
T Consensus 157 ~~l~~~lGk~~v~v-~d~------fi~Nrll~----~~~~EA~~l~~~-Gv~~e~id~~~~~g~g~~~ 212 (293)
T 1zej_A 157 EGFLRELGKEVVVC-KGQ------SLVNRFNA----AVLSEASRMIEE-GVRAEDVDRVWKHHLGLLY 212 (293)
T ss_dssp HHHHHHTTCEEEEE-ESS------CHHHHHHH----HHHHHHHHHHHH-TCCHHHHHHHHHTTHHHHH
T ss_pred HHHHHHcCCeEEEe-ccc------ccHHHHHH----HHHHHHHHHHHh-CCCHHHHHHHHHhcCCCCC
Confidence 99999999999885 554 78888776 469999999999 8899999999987766655
No 45
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.84 E-value=2.7e-20 Score=209.24 Aligned_cols=258 Identities=13% Similarity=0.074 Sum_probs=185.6
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeC--ChhHHHHHHhcCC-----------cccC--CHHHHhccCcEEEEEcC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDV--YRPTLTKFQNVGG-----------LIAN--SPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr--~~~~~~~l~~~G~-----------~~~~--s~~e~~~~aDvV~l~vp 211 (988)
|||+|||+|.||+.+|..|+++||+|++||| ++++.+.+.+.|. ..++ ++.++++++|+||+|+|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v~ 80 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGVS 80 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcCC
Confidence 5899999999999999999999999999999 9999999988764 3455 77788899999999999
Q ss_pred ChHHHHHHHccccchhhhCCCCCEEEecC-CC---CHHHHHHHHHHHHhcCCCceEecCcccCCccccc---CCC--eEE
Q 001973 212 NEAQAESVLYGDLGAVSALSSGASIILSS-TV---SPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRAS---MGE--LTI 282 (988)
Q Consensus 212 ~~~~~~~vl~~~~~i~~~l~~g~ivId~s-t~---~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~---~g~--l~~ 282 (988)
++ .+++++ +.+.+ +.++++||+++ +. .|++.+.+.+.+++. .+..+ ..++..+|..+. .+. ..+
T Consensus 81 ~~-~~~~v~---~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~-~g~~~-~~~~~~~p~~~~~~~~g~~~~~~ 153 (335)
T 1txg_A 81 TD-GVLPVM---SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLK-HDLRE-RTVAITGPAIAREVAKRMPTTVV 153 (335)
T ss_dssp GG-GHHHHH---HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTS-TTCGG-GEEEEESSCCHHHHHTTCCEEEE
T ss_pred hH-HHHHHH---HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHh-cCCCC-cEEEEECCCcHHHHHccCCcEEE
Confidence 87 478887 57777 88899999998 44 455666777777642 12211 223333444332 133 345
Q ss_pred EEeCCHHHHHHHHHHHHhcCCeEEEEeCCcchHHH-----------------HHHH-----HHHHHHHHHHHHHHHHHHH
Q 001973 283 MAAGTEESLKSTGSVLSALSEKLYVIKGGCGAGSG-----------------VKMA-----NQLLAGVHIASAAEAMAFG 340 (988)
Q Consensus 283 ~~gg~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~-----------------~Kl~-----~N~~~~~~~~~~~Ea~~la 340 (988)
+.+.+++.++.++++|+..+.++++ .+++....+ +|+. +|.....+..++.|+..++
T Consensus 154 ~~~~~~~~~~~~~~ll~~~g~~~~~-~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la 232 (335)
T 1txg_A 154 FSSPSESSANKMKEIFETEYFGVEV-TTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELI 232 (335)
T ss_dssp EECSCHHHHHHHHHHHCBTTEEEEE-ESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCHHHHHHHHHHhCCCcEEEEe-cCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5556788899999999999988776 577755555 4666 7877788899999999999
Q ss_pred HHcCCCHHHHH------HHHHhcCCCccccccccccccCCCCCCCc----------hhhHHHHHHHHHHHHHHhCCCCch
Q 001973 341 ARLGLNTRVLF------NIITDSGGSSWMFENRVPHMLDNDYTPYS----------ALDIFVKDMGIIARECLSQRVPLH 404 (988)
Q Consensus 341 ~~~Gid~~~~~------~~l~~~~~~s~~~~~~~~~~~~~~~~~~~----------~l~~~~kDl~~~~~~a~~~gi~~p 404 (988)
++.|++++++. +.+..... +... .........+.... ...+..||++++.++++++|+++|
T Consensus 233 ~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~~a~~~gv~~P 309 (335)
T 1txg_A 233 EILGGDRETAFGLSGFGDLIATFRG-GRNG--MLGELLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLSSKINADTK 309 (335)
T ss_dssp HHHTSCGGGGGSTTTHHHHHHTTTC-HHHH--HHHHHHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCCCH
T ss_pred HHHCCCcchhhcccchhheeecccc-CccH--HHHHHHhCCCCHHHHHHHhccCCceecchHHHHHHHHHHHHHcCCCCc
Confidence 99999987764 44433222 1110 00001111111000 123345999999999999999999
Q ss_pred HHHHHHHHHHH
Q 001973 405 ISTIAHQLFLA 415 (988)
Q Consensus 405 i~~a~~~~~~~ 415 (988)
+++.++++++.
T Consensus 310 ~~~~~~~~~~~ 320 (335)
T 1txg_A 310 LLDSIYRVLYE 320 (335)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHHhC
Confidence 99999998864
No 46
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.83 E-value=2.1e-20 Score=202.84 Aligned_cols=247 Identities=13% Similarity=0.105 Sum_probs=185.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCC-CeEEEEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSN-FTVIGYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
|||+|||+|.||..+|.+|+++| ++|++|||++++.+.+.+. |+..++++.+++ ++|+||+|+| +..+++++ .
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~-~~~~~~v~---~ 75 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK-PQDMEAAC---K 75 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC-HHHHHHHH---T
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC-chhHHHHH---H
Confidence 58999999999999999999999 9999999999999999875 888888888888 9999999999 77788888 3
Q ss_pred chhhhCCCCCEEEec-CCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeC--CHHHHHHHHHHHHhc
Q 001973 225 GAVSALSSGASIILS-STVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAG--TEESLKSTGSVLSAL 301 (988)
Q Consensus 225 ~i~~~l~~g~ivId~-st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg--~~~~~~~~~~ll~~~ 301 (988)
.+.+ + +++||++ ++..+ ..+.+.++. +.+++.+ +.+.+.....|...++.++ +++.++.++++|+.+
T Consensus 76 ~l~~--~-~~ivv~~~~g~~~---~~l~~~~~~---~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~ 145 (263)
T 1yqg_A 76 NIRT--N-GALVLSVAAGLSV---GTLSRYLGG---TRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSV 145 (263)
T ss_dssp TCCC--T-TCEEEECCTTCCH---HHHHHHTTS---CCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTT
T ss_pred Hhcc--C-CCEEEEecCCCCH---HHHHHHcCC---CCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhC
Confidence 4544 4 8999999 66665 445555432 4577777 6666777777777777777 788999999999999
Q ss_pred CCeEEEEeC-CcchHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcc-cccccc--c-cccCC
Q 001973 302 SEKLYVIKG-GCGAGSGVKM--ANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSW-MFENRV--P-HMLDN 374 (988)
Q Consensus 302 g~~v~~~~g-~~g~a~~~Kl--~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~-~~~~~~--~-~~~~~ 374 (988)
|.++ ++ + +-......-+ ..+.+....+..+.|+ +++.|++++++.+++..+...++ ++.... | .+...
T Consensus 146 g~~~-~~-~~~~~~~~~~al~g~~~~~~~~~~~~l~e~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (263)
T 1yqg_A 146 GLTV-WL-DDEEKMHGITGISGSGPAYVFYLLDALQNA---AIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQKN 220 (263)
T ss_dssp EEEE-EC-SSTTHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred CCEE-Ee-CChhhccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHh
Confidence 9876 54 4 4111111111 0122233344445555 88999999999998877654444 333333 4 34556
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcC
Q 001973 375 DYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAG 420 (988)
Q Consensus 375 ~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g 420 (988)
.+.|++++..+.+++ ++.|++.|+.+++.+.++++.+.|
T Consensus 221 ~~~~~~~~~~~l~~l-------~~~~~~~~~~~a~~~~~~~~~~~~ 259 (263)
T 1yqg_A 221 VTSKGGTTHEAVEAF-------RRHRVAEAISEGVCACVRRSQEME 259 (263)
T ss_dssp TCCTTSHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCChhHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHH
Confidence 678889888777776 668999999999999999988754
No 47
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.83 E-value=3.3e-20 Score=207.29 Aligned_cols=264 Identities=14% Similarity=0.138 Sum_probs=181.9
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCC----CeEEEEeCChh--HHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSN----FTVIGYDVYRP--TLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAES 218 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G----~~V~v~dr~~~--~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~ 218 (988)
++|||+|||+|+||.+||.+|.++| |+|++|||+++ +.+.+.+.|+..++++.++++++|+||+||| +..+++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~-~~~~~~ 99 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVK-PHIIPF 99 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSC-GGGHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeC-HHHHHH
Confidence 3469999999999999999999999 89999999986 8888888899988899999999999999999 567888
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCC---HHHHHHHH
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGT---EESLKSTG 295 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~---~~~~~~~~ 295 (988)
++ .++.+.+.++++||+++++.+. ..+.+.+.+...+.+++.+ +...+.....|. .++++|+ ++.++.++
T Consensus 100 vl---~~l~~~l~~~~ivvs~s~gi~~--~~l~~~l~~~~~~~~vv~~-~p~~p~~~~~g~-~v~~~g~~~~~~~~~~v~ 172 (322)
T 2izz_A 100 IL---DEIGADIEDRHIVVSCAAGVTI--SSIEKKLSAFRPAPRVIRC-MTNTPVVVREGA-TVYATGTHAQVEDGRLME 172 (322)
T ss_dssp HH---HHHGGGCCTTCEEEECCTTCCH--HHHHHHHHTTSSCCEEEEE-ECCGGGGGTCEE-EEEEECTTCCHHHHHHHH
T ss_pred HH---HHHHhhcCCCCEEEEeCCCCCH--HHHHHHHhhcCCCCeEEEE-eCCcHHHHcCCe-EEEEeCCCCCHHHHHHHH
Confidence 88 5777888889999999765543 2456666542113344433 223333344444 6666776 78899999
Q ss_pred HHHHhcCCeEEEEeCCcchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccc-cc--ccccc
Q 001973 296 SVLSALSEKLYVIKGGCGAGSGVKMA--NQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWM-FE--NRVPH 370 (988)
Q Consensus 296 ~ll~~~g~~v~~~~g~~g~a~~~Kl~--~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~-~~--~~~~~ 370 (988)
++|+.+|.++++ . +-.......+. .|.+.+.++.++.|+ +++.|++++.+.+++..+...++. .. ...|.
T Consensus 173 ~ll~~~G~~~~~-~-e~~~~~~~a~~g~gpa~~~~~~eala~a---~~~~Gl~~~~a~~l~~~~~~g~~~~~~~~~~~p~ 247 (322)
T 2izz_A 173 QLLSSVGFCTEV-E-EDLIDAVTGLSGSGPAYAFTALDALADG---GVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPG 247 (322)
T ss_dssp HHHHTTEEEEEC-C-GGGHHHHHHHTTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHH
T ss_pred HHHHhCCCEEEe-C-HHHHHHHHHHhcCHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 999999987654 2 22222233322 233333334444444 688999999999999887654442 22 12333
Q ss_pred ccCCC-CCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHH
Q 001973 371 MLDND-YTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAA 428 (988)
Q Consensus 371 ~~~~~-~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a 428 (988)
++.+. +.|+++.. ..++..++.|++.++.+++.+.++++.+.|.+....+.
T Consensus 248 ~l~~~v~sp~g~t~-------~~l~~l~~~g~~~~~~~av~~~~~ra~e~~~~~~~~~~ 299 (322)
T 2izz_A 248 QLKDNVSSPGGATI-------HALHVLESGGFRSLLINAVEASCIRTRELQSMADQEQV 299 (322)
T ss_dssp HHHHHHCCTTSHHH-------HHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHhCCCCCcHHH-------HHHHHHHHCCHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 33332 35555533 33456678999999999999999999987765444433
No 48
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.83 E-value=6.4e-21 Score=204.61 Aligned_cols=179 Identities=17% Similarity=0.193 Sum_probs=145.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhH--------------HHHHHhc-CCcccCCHHHHhccCcEEEEEc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPT--------------LTKFQNV-GGLIANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~--------------~~~l~~~-G~~~~~s~~e~~~~aDvV~l~v 210 (988)
.+||+|||+|.||++||.+|+++||+|++|||++++ .+++.+. +...++++.+++++||+||+||
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvVilav 98 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELVVNAT 98 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEEEEcc
Confidence 479999999999999999999999999999999997 5555543 5566788999999999999999
Q ss_pred CChHHHHHHHccccch-hhhCCCCCEEEecC-----------CCCHHHHHHHHHHHHhcC------CCceEecCcccCCc
Q 001973 211 TNEAQAESVLYGDLGA-VSALSSGASIILSS-----------TVSPGFVSQLERRLQFEG------KDLKLVDAPVSGGV 272 (988)
Q Consensus 211 p~~~~~~~vl~~~~~i-~~~l~~g~ivId~s-----------t~~p~~~~~l~~~l~~~~------~g~~~ldapv~g~~ 272 (988)
|+.... +++ .++ .+.+ ++++|||+| |+.|.+...+.+.+.+.. +++.++++|+++++
T Consensus 99 p~~~~~-~~~---~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~a~v~~~~ 173 (245)
T 3dtt_A 99 EGASSI-AAL---TAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMNASLMVDP 173 (245)
T ss_dssp CGGGHH-HHH---HHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSCHHHHHCG
T ss_pred CcHHHH-HHH---HHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccCHHHhcCc
Confidence 987754 444 244 4555 899999999 566655555555554421 26788999999999
Q ss_pred ccccCCCeEEEEeC-CHHHHHHHHHHHHhcCCe-EEEEeCCcchHHHHHHHHHHHHHHHH
Q 001973 273 KRASMGELTIMAAG-TEESLKSTGSVLSALSEK-LYVIKGGCGAGSGVKMANQLLAGVHI 330 (988)
Q Consensus 273 ~~a~~g~l~~~~gg-~~~~~~~~~~ll~~~g~~-v~~~~g~~g~a~~~Kl~~N~~~~~~~ 330 (988)
..+..+.+.++++| +++.++.++++|+.+|.+ +++ +|+.|.++.+|+++|++..++.
T Consensus 174 ~~a~~g~~~~~v~g~d~~~~~~v~~ll~~~g~~~~~~-~G~~g~a~~~k~~~~~~~~l~~ 232 (245)
T 3dtt_A 174 GRAAGGDHSVFVSGNDAAAKAEVATLLKSLGHQDVID-LGDITTARGAEMLLPVWIRLWG 232 (245)
T ss_dssp GGTGGGCCCEEEECSCHHHHHHHHHHHHHTTCCCEEE-EESGGGHHHHHTTHHHHHHHHH
T ss_pred cccCCCCeeEEEECCCHHHHHHHHHHHHHcCCCceec-cCcHHHHHHhhhhHHHHHHHHH
Confidence 98888888888766 589999999999999974 566 6899999999999999988753
No 49
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.83 E-value=1.5e-19 Score=195.63 Aligned_cols=246 Identities=15% Similarity=0.136 Sum_probs=186.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
+|||+|||+|.||..++.+|.+.|++|.+|||++++.+.+.+. |+..++++.++++++|+||+|+| +..+++++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~-~~~~~~v~~--- 78 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIK-PQLFETVLK--- 78 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSC-GGGHHHHHT---
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeC-cHhHHHHHH---
Confidence 4799999999999999999999999999999999999988865 88888899999999999999999 566777762
Q ss_pred chhhhCCCCCEEEecC-CCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeC--CHHHHHHHHHHHHhc
Q 001973 225 GAVSALSSGASIILSS-TVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAG--TEESLKSTGSVLSAL 301 (988)
Q Consensus 225 ~i~~~l~~g~ivId~s-t~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg--~~~~~~~~~~ll~~~ 301 (988)
. +.+++++|+++ +..+.. +.+.+. .+.+++. ++.+.|.....|...++.++ +++.++.++++|+.+
T Consensus 79 ~----l~~~~~vv~~~~~~~~~~---l~~~~~---~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~ 147 (259)
T 2ahr_A 79 P----LHFKQPIISMAAGISLQR---LATFVG---QDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSF 147 (259)
T ss_dssp T----SCCCSCEEECCTTCCHHH---HHHHHC---TTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTT
T ss_pred H----hccCCEEEEeCCCCCHHH---HHHhcC---CCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhC
Confidence 3 33788999985 566553 444443 2446665 66666777777766666666 788999999999999
Q ss_pred CCeEEEEeCCcchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcc-cccccc--cccc-CCC
Q 001973 302 SEKLYVIKGGCGAGSGVKMA--NQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSW-MFENRV--PHML-DND 375 (988)
Q Consensus 302 g~~v~~~~g~~g~a~~~Kl~--~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~-~~~~~~--~~~~-~~~ 375 (988)
| ++++ .++......+++. .|.+...+...+.|+ +++.|+|++++.+++..+...++ ++.... |.++ +..
T Consensus 148 G-~~~~-~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 222 (259)
T 2ahr_A 148 G-STFD-ISEKDFDTFTALAGSSPAYIYLFIEALAKA---GVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAI 222 (259)
T ss_dssp E-EEEE-CCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHH
T ss_pred C-CEEE-ecHHHccHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhC
Confidence 9 5666 4666677777764 233333344445554 88999999999999998776665 444333 5555 334
Q ss_pred CCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH
Q 001973 376 YTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSA 418 (988)
Q Consensus 376 ~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~ 418 (988)
+.|+|++..+.||++ +.|++..+.+++.+.++++.+
T Consensus 223 ~~p~~~~~~~~~~l~-------~~g~~~~~~~a~~~~~~r~~~ 258 (259)
T 2ahr_A 223 CSPGGTTIAGLMELE-------RLGLTATVSSAIDKTIDKAKS 258 (259)
T ss_dssp CCTTSHHHHHHHHHH-------HHTHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhHHHHHHHHH-------HCChHHHHHHHHHHHHHHHhc
Confidence 678999888888884 568888888888888877654
No 50
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.82 E-value=1e-20 Score=211.07 Aligned_cols=258 Identities=13% Similarity=0.087 Sum_probs=177.2
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC-----C-CeEEEEeCChhHHHHHHh-cCCcccC-------------CHHHHhccCc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS-----N-FTVIGYDVYRPTLTKFQN-VGGLIAN-------------SPAEAAKDVG 204 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~-----G-~~V~v~dr~~~~~~~l~~-~G~~~~~-------------s~~e~~~~aD 204 (988)
++|||+|||+|.||+.+|.+|+++ | |+|++||| +++.+.+++ .|+.... +..+.+..+|
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 346999999999999999999999 9 99999999 888999988 7766543 4445678999
Q ss_pred EEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc--CCCceEecCcccCC--cccccCCCe
Q 001973 205 VLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFE--GKDLKLVDAPVSGG--VKRASMGEL 280 (988)
Q Consensus 205 vV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~--~~g~~~ldapv~g~--~~~a~~g~l 280 (988)
+||+|||+.. +++++ +.+.+.+.++++||+++++ ++..+.+.+.++.. ..++.+.++++.+. ......|.+
T Consensus 86 ~vil~vk~~~-~~~v~---~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~ 160 (317)
T 2qyt_A 86 YILFCTKDYD-MERGV---AEIRPMIGQNTKILPLLNG-ADIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADREL 160 (317)
T ss_dssp EEEECCSSSC-HHHHH---HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEecCccc-HHHHH---HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCce
Confidence 9999999976 67777 5677778788899998765 44445555554331 02344566666532 223334443
Q ss_pred EEEE----eCCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHH-------------------HHHHHHHHHH
Q 001973 281 TIMA----AGTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAG-------------------VHIASAAEAM 337 (988)
Q Consensus 281 ~~~~----gg~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~-------------------~~~~~~~Ea~ 337 (988)
.++. +++.+.+ .+.++|+..+.++++ .++++.+.+.|++.|...+ ++..++.|+.
T Consensus 161 ~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~-~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~~ 238 (317)
T 2qyt_A 161 FYFGSGLPEQTDDEV-RLAELLTAAGIRAYN-PTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEVA 238 (317)
T ss_dssp EEEECCSSSCCHHHH-HHHHHHHHTTCCEEC-CSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEcCCCCCCcCHHH-HHHHHHHHCCCCCEE-chHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3232 1246667 899999999988877 6899999999999998653 4558999999
Q ss_pred HHHHHcCCCHH--HHHHHHHhcCCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 001973 338 AFGARLGLNTR--VLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLA 415 (988)
Q Consensus 338 ~la~~~Gid~~--~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~ 415 (988)
.++++.|++++ .+.+.+..... ......+.+. .|+..++..+. ...++++.++++++|+++|+.+.++++++.
T Consensus 239 ~v~~a~G~~~~~~~~~~~~~~~~~---~~~~~~~sm~-~d~~~g~~~E~-~~~~g~~~~~a~~~gv~~P~~~~~~~~~~~ 313 (317)
T 2qyt_A 239 ELFRAKYGQVPDDVVQQLLDKQRK---MPPESTSSMH-SDFLQGGSTEV-ETLTGYVVREAEALRVDLPMYKRMYRELVS 313 (317)
T ss_dssp HHHHHHTSCCCSSHHHHHHHHHHH---C----------------------CTTTHHHHHHHHHTTCCCHHHHHHHHTTCC
T ss_pred HHHHHcCCCCChHHHHHHHHHHhc---cCCCCCChHH-HHHHcCCccCH-HHHhhHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 99999999863 56665544210 0111112222 23333333211 122679999999999999999999988754
No 51
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.82 E-value=8.8e-20 Score=202.24 Aligned_cols=253 Identities=14% Similarity=0.075 Sum_probs=172.0
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----------cC--------------CcccCCHHH
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-----------VG--------------GLIANSPAE 198 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~G--------------~~~~~s~~e 198 (988)
+.++||+|||+|.||.+||.+|+++||+|++||+++++++.+.+ .| ++.++++.+
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 34579999999999999999999999999999999998877643 23 356789999
Q ss_pred HhccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHh--cCCCceEecCcccCCccccc
Q 001973 199 AAKDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQF--EGKDLKLVDAPVSGGVKRAS 276 (988)
Q Consensus 199 ~~~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~--~~~g~~~ldapv~g~~~~a~ 276 (988)
++++||+||+|||...+++..++ .++.+.++++++|++.|++.+.. ++++.+.. +..+.||++.|..
T Consensus 84 av~~aDlVieavpe~~~~k~~v~--~~l~~~~~~~~Ii~s~tS~i~~~--~la~~~~~~~r~ig~Hp~~P~~~------- 152 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIF--AQLDSIVDDRVVLSSSSSCLLPS--KLFTGLAHVKQCIVAHPVNPPYY------- 152 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHH--HHHHTTCCSSSEEEECCSSCCHH--HHHTTCTTGGGEEEEEECSSTTT-------
T ss_pred HHhcCCEEEEeccCCHHHHHHHH--HHHHhhCCCCeEEEEeCCChHHH--HHHHhcCCCCCeEEeecCCchhh-------
Confidence 99999999999998766654443 56888889999998665443322 34443321 2236677765421
Q ss_pred CCCeEEEEe--CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 001973 277 MGELTIMAA--GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNII 354 (988)
Q Consensus 277 ~g~l~~~~g--g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l 354 (988)
.+.+.++.+ ++++.+++++++++.+|++++++ +.-+.+. ++||++.+ +++|++.++++.|++++++.+++
T Consensus 153 ~~lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~v-~~~~~Gf---i~Nrll~a----~~~EA~~l~~~g~~~~~~id~a~ 224 (319)
T 2dpo_A 153 IPLVELVPHPETSPATVDRTHALMRKIGQSPVRV-LKEIDGF---VLNRLQYA----IISEAWRLVEEGIVSPSDLDLVM 224 (319)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEC-SSCCTTT---THHHHHHH----HHHHHHHHHHTTSSCHHHHHHHH
T ss_pred cceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEE-CCCcCCc---hHHHHHHH----HHHHHHHHHHhCCCCHHHHHHHH
Confidence 122334445 58999999999999999998885 4434443 56777654 59999999999999999999999
Q ss_pred HhcCCCccccccccccccCCCCCCCchhhHHHHHHH-HHHHHHHhCCCCchHHHHHHHHHHHHHHc
Q 001973 355 TDSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMG-IIARECLSQRVPLHISTIAHQLFLAGSAA 419 (988)
Q Consensus 355 ~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~-~~~~~a~~~gi~~pi~~a~~~~~~~a~~~ 419 (988)
..+.+.+|.+-..... .|+.. ..+..+.+.++ .+.+..++.|-..++...+.+.+....+.
T Consensus 225 ~~g~g~~~a~~GP~~~---~dl~g-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (319)
T 2dpo_A 225 SDGLGMRYAFIGPLET---MHLNA-EGMLSYSDRYSEGMKRVLKSFGSIPEFSGATVEKVNQAMCK 286 (319)
T ss_dssp HTTHHHHHTTSCHHHH---HHHTT-TSHHHHHHHHHHHHHHHHHTCCCCCCCCHHHHHHHHHHHHH
T ss_pred HhCCCCCccccCHHHH---HHhcC-chHHHHHHHHhHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 9877766543222111 11111 12333333333 34566677775444454555544444443
No 52
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.82 E-value=1.3e-20 Score=207.23 Aligned_cols=251 Identities=16% Similarity=0.118 Sum_probs=181.4
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcC---C----c-ccCCHHHHhccCcEEEEEcCChHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVG---G----L-IANSPAEAAKDVGVLVIMVTNEAQAES 218 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G---~----~-~~~s~~e~~~~aDvV~l~vp~~~~~~~ 218 (988)
|||+|||+|.||+.+|.+|+++||+|++|||++++.+.+...+ . . ..++ .+.++++|+||+|+|++. +++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~v~~~~-~~~ 78 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND-PDFLATSDLLLVTLKAWQ-VSD 78 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC-HHHHHTCSEEEECSCGGG-HHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC-ccccCCCCEEEEEecHHh-HHH
Confidence 5899999999999999999999999999999987765554333 1 0 1334 467789999999999875 788
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCce----EecCcccCCcccccCCCeEEEE-eCCHHHHHH
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLK----LVDAPVSGGVKRASMGELTIMA-AGTEESLKS 293 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~----~ldapv~g~~~~a~~g~l~~~~-gg~~~~~~~ 293 (988)
++ +++.+.+.++++||++++.. +..+.+.+.+++...+.. +.++| . +.....|.+.+.. +++++.++.
T Consensus 79 v~---~~l~~~l~~~~~vv~~~~g~-~~~~~l~~~~~~~~~g~~~~~~~~~~p-~--~~~~~~g~~~i~~~~~~~~~~~~ 151 (291)
T 1ks9_A 79 AV---KSLASTLPVTTPILLIHNGM-GTIEELQNIQQPLLMGTTTHAARRDGN-V--IIHVANGITHIGPARQQDGDYSY 151 (291)
T ss_dssp HH---HHHHTTSCTTSCEEEECSSS-CTTGGGTTCCSCEEEEEECCEEEEETT-E--EEEEECCCEEEEESSGGGTTCTH
T ss_pred HH---HHHHhhCCCCCEEEEecCCC-CcHHHHHHhcCCeEEEEEeEccEEcCC-E--EEEecccceEEccCCCCcchHHH
Confidence 87 57888888899999986643 333344433321001222 23344 2 4456677766654 456677889
Q ss_pred HHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCCH--HHH---
Q 001973 294 TGSVLSALSEKLYVIKGGCGAGSGVKMANQLLA------------------GVHIASAAEAMAFGARLGLNT--RVL--- 350 (988)
Q Consensus 294 ~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~------------------~~~~~~~~Ea~~la~~~Gid~--~~~--- 350 (988)
++++|+..+.++++ .++++.+.+.|++.|... ..+..++.|+..++++.|++. +.+
T Consensus 152 ~~~ll~~~g~~~~~-~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~ 230 (291)
T 1ks9_A 152 LADILQTVLPDVAW-HNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDY 230 (291)
T ss_dssp HHHHHHTTSSCEEE-CTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred HHHHHHhcCCCCee-cHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHH
Confidence 99999999998887 689999999999999887 678899999999999999985 454
Q ss_pred -HHHHHhc-CCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHH
Q 001973 351 -FNIITDS-GGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGS 417 (988)
Q Consensus 351 -~~~l~~~-~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~ 417 (988)
.+++... ...|.++.... .+ +..+. ..+.+++.++++++|+++|+.+.++++++...
T Consensus 231 ~~~~~~~~~~~~ssm~~d~~----~g-----~~~e~-~~~~g~~~~~a~~~gv~~P~~~~~~~~~~~~e 289 (291)
T 1ks9_A 231 VMQVIDATAENISSMLQDIR----AL-----RHTEI-DYINGFLLRRARAHGIAVPENTRLFEMVKRKE 289 (291)
T ss_dssp HHHHHHHTTTCCCHHHHHHH----TT-----CCCSG-GGTHHHHHHHHHHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCChHHHHHH----cC-----CccHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 3444332 23344433221 11 11111 15678999999999999999999999988654
No 53
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.81 E-value=9.5e-20 Score=208.08 Aligned_cols=257 Identities=12% Similarity=0.044 Sum_probs=183.7
Q ss_pred CeEEEEccchHHHHHHHHHHhCC-------CeEEEEeCChh-----HHHHHHhc--------------CCcccCCHHHHh
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSN-------FTVIGYDVYRP-----TLTKFQNV--------------GGLIANSPAEAA 200 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G-------~~V~v~dr~~~-----~~~~l~~~--------------G~~~~~s~~e~~ 200 (988)
|||+|||+|+||++||.+|+++| |+|++|||+++ +.+.+++. ++..++++.+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ea~ 101 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDLASVI 101 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESSTHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCHHHHH
Confidence 58999999999999999999999 99999999998 88888763 234567888989
Q ss_pred ccCcEEEEEcCChHHHHHHHccccchhh----hCCCCCEEEecCCC-CH--HHHHHHHHHHHhcCCCceEecCcccCCcc
Q 001973 201 KDVGVLVIMVTNEAQAESVLYGDLGAVS----ALSSGASIILSSTV-SP--GFVSQLERRLQFEGKDLKLVDAPVSGGVK 273 (988)
Q Consensus 201 ~~aDvV~l~vp~~~~~~~vl~~~~~i~~----~l~~g~ivId~st~-~p--~~~~~l~~~l~~~~~g~~~ldapv~g~~~ 273 (988)
+++|+||+|||+ ..+++++ +++.+ .+.++++||+++++ .+ .+.+.+.+.+.+.. + ..+++..+|.
T Consensus 102 ~~aDvVilav~~-~~~~~vl---~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~-~---~~~~v~~gp~ 173 (375)
T 1yj8_A 102 NDADLLIFIVPC-QYLESVL---ASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFL-N---IPCSALSGAN 173 (375)
T ss_dssp TTCSEEEECCCH-HHHHHHH---HHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHS-S---SCEEEEECSC
T ss_pred cCCCEEEEcCCH-HHHHHHH---HHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHc-C---CCEEEEeCCc
Confidence 999999999996 6688888 56777 78889999999854 44 22334444444321 2 1233444444
Q ss_pred ccc-----CCCeEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHH-----------------HHHHHHHHHHHH
Q 001973 274 RAS-----MGELTIMAAGTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVK-----------------MANQLLAGVHIA 331 (988)
Q Consensus 274 ~a~-----~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~K-----------------l~~N~~~~~~~~ 331 (988)
.+. .....++.+++++.++.++++|+..+.++++ .+++-...+.| +.+|...+++..
T Consensus 174 ~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~-~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~ 252 (375)
T 1yj8_A 174 IAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINC-VNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRN 252 (375)
T ss_dssp CHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEE-ESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred hHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEE-eCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHH
Confidence 332 3334566677888999999999999988877 56764444443 446778888999
Q ss_pred HHHHHHHHHHHc--CCCHHHHHHH------HHhcCCCccccccccccccC-CC-CC--C------CchhhHHHHHHHHHH
Q 001973 332 SAAEAMAFGARL--GLNTRVLFNI------ITDSGGSSWMFENRVPHMLD-ND-YT--P------YSALDIFVKDMGIIA 393 (988)
Q Consensus 332 ~~~Ea~~la~~~--Gid~~~~~~~------l~~~~~~s~~~~~~~~~~~~-~~-~~--~------~~~l~~~~kDl~~~~ 393 (988)
++.|+.+++++. |++++++.++ +..... +... .....+.. ++ +. . .+...+..++++.+.
T Consensus 253 ~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~-~~~~-~~~~~~~~~g~~~~~~d~~~~~~~g~~~E~~~~~~~v~ 330 (375)
T 1yj8_A 253 GINEMILFGKVFFQKFNENILLESCGFADIITSFLA-GRNA-KCSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVY 330 (375)
T ss_dssp HHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSS-SSHH-HHHHHHHHHTTSSCHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcchhhccccccceeEeeeC-CccH-HHHHHHHhcCCCCCHHHHHHhhcCCcEeeHHHHHHHHH
Confidence 999999999999 6998877542 222221 1110 01111111 10 11 0 034456789999999
Q ss_pred HHHHhCCC--CchHHHHHHHHHH
Q 001973 394 RECLSQRV--PLHISTIAHQLFL 414 (988)
Q Consensus 394 ~~a~~~gi--~~pi~~a~~~~~~ 414 (988)
++++++|+ ++|+++.++++++
T Consensus 331 ~~a~~~gv~~~~P~~~~v~~~~~ 353 (375)
T 1yj8_A 331 HMIKEKNMTNEFPLFTVLHKISF 353 (375)
T ss_dssp HHHHHTTCGGGCHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHh
Confidence 99999999 9999999999876
No 54
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.81 E-value=9.4e-20 Score=206.58 Aligned_cols=259 Identities=11% Similarity=0.003 Sum_probs=183.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCC-------CeEEEEeCChh-----HHHHHHhcC--------------CcccCCHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSN-------FTVIGYDVYRP-----TLTKFQNVG--------------GLIANSPAEA 199 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G-------~~V~v~dr~~~-----~~~~l~~~G--------------~~~~~s~~e~ 199 (988)
+|||+|||+|+||+++|..|+++| |+|++|||+++ +.+.+++.+ +..++++.++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQA 87 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHHHH
Confidence 369999999999999999999999 99999999998 888877532 3345788888
Q ss_pred hccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCC---HHHHHHHHHHHHhcCCCceEecCcccCCccccc
Q 001973 200 AKDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVS---PGFVSQLERRLQFEGKDLKLVDAPVSGGVKRAS 276 (988)
Q Consensus 200 ~~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~---p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~ 276 (988)
++++|+||+|||+ ..+++++ +++.+.+.++++||+++++. |.+.+.+.+.+.+.. + .+.++..+|..+.
T Consensus 88 ~~~aD~Vilav~~-~~~~~v~---~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~-~---~~~~v~~gp~~a~ 159 (354)
T 1x0v_A 88 AEDADILIFVVPH-QFIGKIC---DQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERL-G---IPMSVLMGANIAS 159 (354)
T ss_dssp HTTCSEEEECCCG-GGHHHHH---HHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHH-T---CCEEEEECSCCHH
T ss_pred HcCCCEEEEeCCH-HHHHHHH---HHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHc-C---CCEEEEECCCcHH
Confidence 9999999999997 4588888 57778888899999998743 333333444443321 2 1233444444332
Q ss_pred ---CC--CeEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHH-----------------HHHHHHHHHHHHH
Q 001973 277 ---MG--ELTIMAAGTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMA-----------------NQLLAGVHIASAA 334 (988)
Q Consensus 277 ---~g--~l~~~~gg~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~-----------------~N~~~~~~~~~~~ 334 (988)
.+ ...++.+++++.++.++++|+..+.++++ .+++....+.|++ +|....++..++.
T Consensus 160 ~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~-~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~ 238 (354)
T 1x0v_A 160 EVADEKFCETTIGCKDPAQGQLLKELMQTPNFRITV-VQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLM 238 (354)
T ss_dssp HHHTTCCEEEEEECSSHHHHHHHHHHHCBTTEEEEE-ESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHhcCCceEEEEECCHHHHHHHHHHhCCCCEEEEE-cCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHH
Confidence 23 34455667888999999999999988877 5776555666554 6777788899999
Q ss_pred HHHHHHHHcCC---CHHHHHHH------HHhcCCCccccccccccccCCCCCC--------CchhhHHHHHHHHHHHHHH
Q 001973 335 EAMAFGARLGL---NTRVLFNI------ITDSGGSSWMFENRVPHMLDNDYTP--------YSALDIFVKDMGIIARECL 397 (988)
Q Consensus 335 Ea~~la~~~Gi---d~~~~~~~------l~~~~~~s~~~~~~~~~~~~~~~~~--------~~~l~~~~kDl~~~~~~a~ 397 (988)
|+.+++++.|+ +++++.++ +..... +... ...+.+....+.. .+...+..||++.+.++++
T Consensus 239 E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~g~v~~~a~ 316 (354)
T 1x0v_A 239 EMIAFAKLFCSGPVSSATFLESCGVADLITTCYG-GRNR-KVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQ 316 (354)
T ss_dssp HHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHH-CHHH-HHHHHHHHHCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcccccccchHHHHHHhhcc-cccH-HHHHHHHhcCCCHHHHHHhhcCCcEeehHHHHHHHHHHHH
Confidence 99999999999 88776432 221111 1111 1112222101110 1334456799999999999
Q ss_pred hCCC--CchHHHHHHHHHHH
Q 001973 398 SQRV--PLHISTIAHQLFLA 415 (988)
Q Consensus 398 ~~gi--~~pi~~a~~~~~~~ 415 (988)
++|+ ++|+++.++++++.
T Consensus 317 ~~gv~~~~P~~~~v~~~~~~ 336 (354)
T 1x0v_A 317 HKGLVDKFPLFMAVYKVCYE 336 (354)
T ss_dssp HHTCGGGSHHHHHHHHHHHS
T ss_pred HhCCCCCCCHHHHHHHHHhC
Confidence 9999 99999999998763
No 55
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.78 E-value=3.5e-19 Score=196.14 Aligned_cols=120 Identities=18% Similarity=0.267 Sum_probs=116.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc--chHHHHHHhHHHHHHHHHh
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL--HFLNAFIQNLGIALDMAKT 78 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~--f~l~l~~KDl~la~~~a~~ 78 (988)
||||++.++++++++|++.|++++|||++.++++++.++++||+++++.+++.+++|.| |+++++.||+++++++|++
T Consensus 175 l~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~~KDl~l~~~~A~~ 254 (297)
T 4gbj_A 175 LAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLGLKDINLTLQTASD 254 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999987 8999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhccc
Q 001973 79 LAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVN 120 (988)
Q Consensus 79 ~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~ 120 (988)
.|+|+|+++.++++|+++.++|+|++|++++++.+++.+|..
T Consensus 255 ~g~~~p~~~~~~~~~~~a~~~G~g~~D~sal~~~~~~~aGl~ 296 (297)
T 4gbj_A 255 VNAPMPFADIIRNRFISGLAKGRENLDWGALALGASDDAGLT 296 (297)
T ss_dssp TTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGHHHHHHTTCC
T ss_pred hCCCChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999998863
No 56
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.76 E-value=9.1e-18 Score=184.39 Aligned_cols=201 Identities=13% Similarity=0.178 Sum_probs=161.1
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
+|||+|||+ |.||..+|..|.++||+|++|||++++.+.+.+.|+... ++.++++++|+||+|+|... +++++ +
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~~-~~~v~---~ 85 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDNI-IEKVA---E 85 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHHH-HHHHH---H
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCchH-HHHHH---H
Confidence 479999999 999999999999999999999999999999888786654 67788899999999999866 78887 5
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEe-cCcccCCc------ccccCCC-------eE--EEEeCCH
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLV-DAPVSGGV------KRASMGE-------LT--IMAAGTE 288 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~l-dapv~g~~------~~a~~g~-------l~--~~~gg~~ 288 (988)
++.+.+.++++||++|+..|... +.+ ...+.+|+ ..|+++++ .....|. .. +..++++
T Consensus 86 ~l~~~l~~~~ivv~~s~~~~~~~--l~~----~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~ 159 (286)
T 3c24_A 86 DIVPRVRPGTIVLILDAAAPYAG--VMP----ERADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPE 159 (286)
T ss_dssp HHGGGSCTTCEEEESCSHHHHHT--CSC----CCTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCT
T ss_pred HHHHhCCCCCEEEECCCCchhHH--HHh----hhCCCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCH
Confidence 77788889999999888764332 222 12457888 78988877 4355563 12 3356889
Q ss_pred HHHHHHHHHHHhcCC---eEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHhcC
Q 001973 289 ESLKSTGSVLSALSE---KLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAF-GARLGLNTRVLFNIITDSG 358 (988)
Q Consensus 289 ~~~~~~~~ll~~~g~---~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l-a~~~Gid~~~~~~~l~~~~ 358 (988)
+.++.++++|+.+|. +++++ ++.+.....|.+.|.....++..+.|++.. +++.|++++++.+++..+.
T Consensus 160 ~~~~~v~~l~~~~G~~~~~~~~v-~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~~ 232 (286)
T 3c24_A 160 EHYAIGADICETMWSPVTRTHRV-TTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGHL 232 (286)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEC-CHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcceEEEe-ChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 999999999999999 78874 666666666999988777888888997766 5555999999999887654
No 57
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.75 E-value=6.7e-18 Score=182.95 Aligned_cols=245 Identities=18% Similarity=0.179 Sum_probs=168.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhCC----CeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSN----FTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G----~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
+|||+|||+|.||+.||.+|+++| ++|++|||++++ .|+..++++.++++++|+||+|+|. ..+++++
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~------~g~~~~~~~~~~~~~~D~vi~~v~~-~~~~~v~- 75 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN------TTLNYMSSNEELARHCDIIVCAVKP-DIAGSVL- 75 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS------SSSEECSCHHHHHHHCSEEEECSCT-TTHHHHH-
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc------CceEEeCCHHHHHhcCCEEEEEeCH-HHHHHHH-
Confidence 469999999999999999999999 799999999887 5888888999999999999999995 5688888
Q ss_pred cccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeC---CHHHHHHHHHHH
Q 001973 222 GDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAG---TEESLKSTGSVL 298 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll 298 (988)
+++.+.++++.++.++++..+.. +.+.++...+.++++. +.|.....| .++++++ +++.++.++++|
T Consensus 76 --~~l~~~l~~~~vv~~~~gi~~~~---l~~~~~~~~~~v~~~p----~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~ll 145 (262)
T 2rcy_A 76 --NNIKPYLSSKLLISICGGLNIGK---LEEMVGSENKIVWVMP----NTPCLVGEG-SFIYCSNKNVNSTDKKYVNDIF 145 (262)
T ss_dssp --HHSGGGCTTCEEEECCSSCCHHH---HHHHHCTTSEEEEEEC----CGGGGGTCE-EEEEEECTTCCHHHHHHHHHHH
T ss_pred --HHHHHhcCCCEEEEECCCCCHHH---HHHHhCCCCcEEEECC----ChHHHHcCC-eEEEEeCCCCCHHHHHHHHHHH
Confidence 46777775445666777887753 4444432101123331 122233345 5666665 688899999999
Q ss_pred HhcCCeEEEEeCCcchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccccc---cccccccC
Q 001973 299 SALSEKLYVIKGGCGAGSGVKMA--NQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMFE---NRVPHMLD 373 (988)
Q Consensus 299 ~~~g~~v~~~~g~~g~a~~~Kl~--~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~~---~~~~~~~~ 373 (988)
+.+|. ++++ ++-......++. .|.+....+..+.|+ +++.|++++.+.+++..+...+..+. ...|.++.
T Consensus 146 ~~~G~-~~~~-~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 220 (262)
T 2rcy_A 146 NSCGI-IHEI-KEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNGLSRELSKNLVLQTIKGSVEMVKKSDQPVQQLK 220 (262)
T ss_dssp HTSEE-EEEC-CGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred HhCCC-EEEe-CHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 99997 6664 544444455543 344444444444443 78999999999988877543333221 33344554
Q ss_pred CCC-CCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcC
Q 001973 374 NDY-TPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAG 420 (988)
Q Consensus 374 ~~~-~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g 420 (988)
+.+ .++++.....+++ ++.|++.++.+++.+.++++.+.+
T Consensus 221 d~~~~~~~t~~~~l~~l-------~~~~~~~~~~~a~~~~~~r~~~~~ 261 (262)
T 2rcy_A 221 DNIVSPGGITAVGLYSL-------EKNSFKYTVMNAVEAACEKSKAMG 261 (262)
T ss_dssp HHHCCTTSHHHHHHHHH-------HHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcCCCChHHHHHHHHH-------HHCChHHHHHHHHHHHHHHHHHhc
Confidence 443 4566654444443 556888999999999999887653
No 58
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.75 E-value=4.3e-18 Score=184.91 Aligned_cols=202 Identities=16% Similarity=0.180 Sum_probs=156.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCe-EEEEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFT-VIGYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
+|||+|||+|.||..++..|.+.|++ |.+|||++++.+.+.+. |+...+++.++++++|+||+|+|+.. +++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~-~~~v~--- 85 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSA-FAELL--- 85 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHH-HHHHH---
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHH-HHHHH---
Confidence 36999999999999999999999999 99999999999988876 88888899998999999999999875 67777
Q ss_pred cchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEE-eCCHHHHHHHHHHHHhcC
Q 001973 224 LGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMA-AGTEESLKSTGSVLSALS 302 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~-gg~~~~~~~~~~ll~~~g 302 (988)
+++.+.++++++||++|++.|... +.+.+.. .+..+..+|+++++.... +...+++ +++++.++.++++|+.+|
T Consensus 86 ~~l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~--~~~~~~~~~~~g~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~g 160 (266)
T 3d1l_A 86 QGIVEGKREEALMVHTAGSIPMNV--WEGHVPH--YGVFYPMQTFSKQREVDF-KEIPFFIEASSTEDAAFLKAIASTLS 160 (266)
T ss_dssp HHHHTTCCTTCEEEECCTTSCGGG--STTTCSS--EEEEEECCCC---CCCCC-TTCCEEEEESSHHHHHHHHHHHHTTC
T ss_pred HHHHhhcCCCcEEEECCCCCchHH--HHHHHHh--ccCcCCceecCCCchhhc-CCCeEEEecCCHHHHHHHHHHHHhcC
Confidence 567777889999999999877543 3333322 234567788777654333 3334444 889999999999999999
Q ss_pred CeEEEEeCCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCc
Q 001973 303 EKLYVIKGGCG---AGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSS 361 (988)
Q Consensus 303 ~~v~~~~g~~g---~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s 361 (988)
.+++++ ++.+ ...+.|+++|... ++..++|+ ++++.|++++.+.+++..+...+
T Consensus 161 ~~~~~~-~~~~~~~~~~~~~l~~~~~~--~~~~~~ea--l~~~~Gl~~~~~~~l~~~~~~~~ 217 (266)
T 3d1l_A 161 NRVYDA-DSEQRKSLHLAAVFTCNFTN--HMYALAAE--LLKKYNLPFDVMLPLIDETARKV 217 (266)
T ss_dssp SCEEEC-CHHHHHHHHHHHHHHHHHHH--HHHHHHHH--HHHHTTCCGGGGHHHHHHHHHHH
T ss_pred CcEEEe-CHHHHHHHHHHHHHHHHHHH--HHHHHHHH--HHHHcCCCHHHHHHHHHHHHHHH
Confidence 888885 5444 5688899999843 34556675 67899999999999888765433
No 59
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.75 E-value=3.2e-18 Score=188.36 Aligned_cols=118 Identities=26% Similarity=0.394 Sum_probs=112.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhcccc-------ccccCCCCc-chHHHHHHhHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIP-------NLLRGDAKL-HFLNAFIQNLGIA 72 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~~-f~l~l~~KDl~la 72 (988)
||||+++++++++++|++.|++++|+|++.++++++.++++||+++.+.| .+.+++|+| |+++++.||++++
T Consensus 174 l~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~~~~f~~~l~~KDl~l~ 253 (300)
T 3obb_A 174 VCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLA 253 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccCCccchHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999998876 467889999 9999999999999
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhc
Q 001973 73 LDMAKTLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLG 118 (988)
Q Consensus 73 ~~~a~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g 118 (988)
+++|++.|+|+|+++.++++|+++.++|+|++|+++++++|++..|
T Consensus 254 ~~~A~~~g~~~p~~~~a~~~~~~a~~~G~g~~D~sal~~~~e~~~G 299 (300)
T 3obb_A 254 QEAAQASASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQG 299 (300)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC-
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999998876
No 60
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=99.75 E-value=6.5e-17 Score=183.40 Aligned_cols=264 Identities=19% Similarity=0.226 Sum_probs=171.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CC--------------cccCCHHHHhccCcEEEEEc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GG--------------LIANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~--------------~~~~s~~e~~~~aDvV~l~v 210 (988)
+|||+|||+|.||..+|..|+++||+|++|||++++.+.+.+. +. ..++++.++++++|+||+|+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 83 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 83 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEeC
Confidence 4799999999999999999999999999999999999998876 32 24678888889999999999
Q ss_pred CChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcC-CCceEec---CcccCCccc---cc----CCC
Q 001973 211 TNEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEG-KDLKLVD---APVSGGVKR---AS----MGE 279 (988)
Q Consensus 211 p~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~-~g~~~ld---apv~g~~~~---a~----~g~ 279 (988)
|... .++++ +.+.+.+.++++||++.+..+++. ++.+.+.+.+ ..+.|++ .|+.+.... +. .+.
T Consensus 84 ~~~~-~~~~~---~~l~~~l~~~~~vv~~~~~~~~~~-~~~~~l~~~~~~~v~~~~~~~~~~~~~~~gpg~v~~~~~~~~ 158 (359)
T 1bg6_A 84 PAIH-HASIA---ANIASYISEGQLIILNPGATGGAL-EFRKILRENGAPEVTIGETSSMLFTCRSERPGQVTVNAIKGA 158 (359)
T ss_dssp CGGG-HHHHH---HHHGGGCCTTCEEEESSCCSSHHH-HHHHHHHHTTCCCCEEEEESSCSEEEECSSTTEEEEEEECSC
T ss_pred CchH-HHHHH---HHHHHhCCCCCEEEEcCCCchHHH-HHHHHHHhcCCCCeEEEEecCCcEEEEeCCCCEEEEEEeecc
Confidence 9877 46676 577888899999999866455443 3555565532 1234554 565543221 11 122
Q ss_pred eEEEE---eCCHHHHHHHHHHHHhcCCeEEEEeCCc-------------------chHHHHH------HH---HHHHHHH
Q 001973 280 LTIMA---AGTEESLKSTGSVLSALSEKLYVIKGGC-------------------GAGSGVK------MA---NQLLAGV 328 (988)
Q Consensus 280 l~~~~---gg~~~~~~~~~~ll~~~g~~v~~~~g~~-------------------g~a~~~K------l~---~N~~~~~ 328 (988)
+.+-. +++++.++.++++|..+. . ..++ +.+...| +- .+....+
T Consensus 159 ~~~g~~~~~~~~~~~~~l~~~~~~~~----~-~~di~~k~~~nvn~~~n~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (359)
T 1bg6_A 159 MDFACLPAAKAGWALEQIGSVLPQYV----A-VENVLHTSLTNVNAVMHPLPTLLNAARCESGTPFQYYLEGITPSVGSL 233 (359)
T ss_dssp EEEEEESGGGHHHHHHHHTTTCTTEE----E-CSCHHHHHHCCHHHHHTHHHHHTTHHHHHTTCCCBHHHHHCCHHHHHH
T ss_pred eEEEeccccccHHHHHHHHHHhhhcE----E-cCChHhhhccCCCccccHHHHHhhhchhhcCCccchhhcCCCHHHHHH
Confidence 11111 234456677777775531 1 1221 1111111 11 1223566
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcccc--cc-ccccccCCCCCCCchhh--HHHHHH----HHHHHHHHhC
Q 001973 329 HIASAAEAMAFGARLGLNTRVLFNIITDSGGSSWMF--EN-RVPHMLDNDYTPYSALD--IFVKDM----GIIARECLSQ 399 (988)
Q Consensus 329 ~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~~~--~~-~~~~~~~~~~~~~~~l~--~~~kDl----~~~~~~a~~~ 399 (988)
+..++.|+..++++.|++++++.+.+......++.. .. ..+.+..+-..+ ..++ .+.||+ +.+.++++++
T Consensus 234 ~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~-~e~~~~~~~~D~~~~~g~~~~~a~~~ 312 (359)
T 1bg6_A 234 AEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGP-INLNTRYFFEDVSTGLVPLSELGRAV 312 (359)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCC-SSSCCHHHHHHHHTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCC-CCCCccceecCcCccHHHHHHHHHHc
Confidence 778899999999999999877777766543322210 00 012232222112 2234 678998 7999999999
Q ss_pred CCCchHHHHHHHHHHHHHHcC
Q 001973 400 RVPLHISTIAHQLFLAGSAAG 420 (988)
Q Consensus 400 gi~~pi~~a~~~~~~~a~~~g 420 (988)
|+++|+.+.++++++.....+
T Consensus 313 gv~~P~~~~l~~~~~~~~~~~ 333 (359)
T 1bg6_A 313 NVPTPLIDAVLDLISSLIDTD 333 (359)
T ss_dssp TCCCHHHHHHHHHHHHHTTCC
T ss_pred CCCchHHHHHHHHHHHHHCCC
Confidence 999999999999998776553
No 61
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.74 E-value=1.6e-17 Score=193.96 Aligned_cols=191 Identities=17% Similarity=0.207 Sum_probs=148.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----------cC-------------CcccCCHHHHh
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-----------VG-------------GLIANSPAEAA 200 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~G-------------~~~~~s~~e~~ 200 (988)
+.+||+|||+|.||.+||.+|+++|++|++||+++++++.+.+ .| ++.+++++ .+
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~ 82 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-AL 82 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-GG
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-Hh
Confidence 3569999999999999999999999999999999999887654 23 23466774 68
Q ss_pred ccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEE-ecCCCCHHHHHHHHHHHH--hcCCCceEec-CcccCCccccc
Q 001973 201 KDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASII-LSSTVSPGFVSQLERRLQ--FEGKDLKLVD-APVSGGVKRAS 276 (988)
Q Consensus 201 ~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivI-d~st~~p~~~~~l~~~l~--~~~~g~~~ld-apv~g~~~~a~ 276 (988)
++||+||+|||...+++..++ .++.+.++++++++ ++||.++.. +++.+. +...|.||++ +|++
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~--~~l~~~~~~~~IlasntSti~i~~---ia~~~~~p~~~ig~hf~~Pa~v~------- 150 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALF--AQLAEVCPPQTLLTTNTSSISITA---IAAEIKNPERVAGLHFFNPAPVM------- 150 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHHH---HTTTSSSGGGEEEEEECSSTTTC-------
T ss_pred cCCCEEEEcCCCcHHHHHHHH--HHHHHhhccCcEEEecCCCCCHHH---HHHHccCccceEEeeecChhhhC-------
Confidence 899999999999876654333 56788899999985 678887753 333322 1223567766 3432
Q ss_pred CCCeEEEEeC---CHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 001973 277 MGELTIMAAG---TEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNI 353 (988)
Q Consensus 277 ~g~l~~~~gg---~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~ 353 (988)
.++.+++| +++.++.+.++++.+|+.++++.+..| +++||++.. +++|++.++++.++|++++.++
T Consensus 151 --~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~~G-----fi~Nr~l~~----~~~Ea~~l~~~g~~~~~~id~a 219 (483)
T 3mog_A 151 --KLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCHSTPG-----FIVNRVARP----YYSEAWRALEEQVAAPEVIDAA 219 (483)
T ss_dssp --CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTT-----TTHHHHTHH----HHHHHHHHHHTTCSCHHHHHHH
T ss_pred --CeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEeccCc-----chHHHHHHH----HHHHHHHHHHhCCCCHHHHHHH
Confidence 56778877 789999999999999999888643343 788887776 5999999999999999999999
Q ss_pred HHhcCC
Q 001973 354 ITDSGG 359 (988)
Q Consensus 354 l~~~~~ 359 (988)
+..+.+
T Consensus 220 ~~~~~G 225 (483)
T 3mog_A 220 LRDGAG 225 (483)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 986544
No 62
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.73 E-value=2.3e-17 Score=182.64 Aligned_cols=193 Identities=17% Similarity=0.149 Sum_probs=140.6
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHH-----------hcC------------------CcccC
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQ-----------NVG------------------GLIAN 194 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~-----------~~G------------------~~~~~ 194 (988)
+.++||+|||+|.||.+||..|+++||+|++||+++++++.+. +.| ++.++
T Consensus 13 ~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 92 (302)
T 1f0y_A 13 IIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATST 92 (302)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEES
T ss_pred ccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEec
Confidence 3457899999999999999999999999999999998877642 223 34567
Q ss_pred CHHHHhccCcEEEEEcCChHHHH-HHHccccchhhhCCCCCEEEec-CCCCHHHHHHHHHHHH--hcCCCceEecCcccC
Q 001973 195 SPAEAAKDVGVLVIMVTNEAQAE-SVLYGDLGAVSALSSGASIILS-STVSPGFVSQLERRLQ--FEGKDLKLVDAPVSG 270 (988)
Q Consensus 195 s~~e~~~~aDvV~l~vp~~~~~~-~vl~~~~~i~~~l~~g~ivId~-st~~p~~~~~l~~~l~--~~~~g~~~ldapv~g 270 (988)
++.+++++||+||+|||...+++ .++ +++.+.++++++|+.. |+..+. ++++.+. ++..+.||.+ |+
T Consensus 93 ~~~~~~~~aD~Vi~avp~~~~~~~~v~---~~l~~~~~~~~iv~s~ts~i~~~---~l~~~~~~~~~~~g~h~~~-P~-- 163 (302)
T 1f0y_A 93 DAASVVHSTDLVVEAIVENLKVKNELF---KRLDKFAAEHTIFASNTSSLQIT---SIANATTRQDRFAGLHFFN-PV-- 163 (302)
T ss_dssp CHHHHTTSCSEEEECCCSCHHHHHHHH---HHHTTTSCTTCEEEECCSSSCHH---HHHTTSSCGGGEEEEEECS-ST--
T ss_pred CHHHhhcCCCEEEEcCcCcHHHHHHHH---HHHHhhCCCCeEEEECCCCCCHH---HHHHhcCCcccEEEEecCC-Cc--
Confidence 88888999999999999876554 444 4677778889988865 455443 3333332 1112445543 22
Q ss_pred CcccccCCCeEEEEeC---CHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Q 001973 271 GVKRASMGELTIMAAG---TEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNT 347 (988)
Q Consensus 271 ~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~ 347 (988)
..+.+..+++| +++.++.+.++++.+|+.++++....| ++++|++. .+++|++.++++.|+++
T Consensus 164 -----~~~~~~~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g-----~i~nr~l~----~~~~Ea~~l~~~g~~~~ 229 (302)
T 1f0y_A 164 -----PVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPG-----FIVNRLLV----PYLMEAIRLYERGDASK 229 (302)
T ss_dssp -----TTCCEEEEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTT-----TTHHHHHH----HHHHHHHHHHHTTSSCH
T ss_pred -----ccCceEEEeCCCCCCHHHHHHHHHHHHHcCCceEEecCccc-----ccHHHHHH----HHHHHHHHHHHcCCCCH
Confidence 12344555655 789999999999999998877522223 56676654 45899999999999999
Q ss_pred HHHHHHHHhcCC
Q 001973 348 RVLFNIITDSGG 359 (988)
Q Consensus 348 ~~~~~~l~~~~~ 359 (988)
+++..++..+.+
T Consensus 230 ~~id~~~~~g~g 241 (302)
T 1f0y_A 230 EDIDTAMKLGAG 241 (302)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC
Confidence 999998875443
No 63
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.71 E-value=2.5e-16 Score=174.73 Aligned_cols=173 Identities=21% Similarity=0.254 Sum_probs=141.5
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHHHHhcCC--cccCCHHH-HhccCcEEEEEcCChHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTKFQNVGG--LIANSPAE-AAKDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~G~--~~~~s~~e-~~~~aDvV~l~vp~~~~~~~v 219 (988)
..|||+|||+|.||..+|..|.++|+ +|++|||++++.+.+.+.|+ ..++++.+ ++++||+||+|||... +.++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v 110 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT-FREI 110 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGG-HHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHH-HHHH
Confidence 34799999999999999999999999 99999999999999988887 45778888 8999999999999865 6677
Q ss_pred HccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec-CcccC----Cccccc----CCCeEEEEe---CC
Q 001973 220 LYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD-APVSG----GVKRAS----MGELTIMAA---GT 287 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld-apv~g----~~~~a~----~g~l~~~~g---g~ 287 (988)
+ +++.+.++++++|+|++++++...+.+.+.++. +|+. .|+.| |+..+. .|..++++. ++
T Consensus 111 l---~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-----~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~ 182 (314)
T 3ggo_A 111 A---KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-----RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTD 182 (314)
T ss_dssp H---HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-----GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSC
T ss_pred H---HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-----CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCC
Confidence 7 578888999999999999998888888777643 4555 36665 444444 566777774 57
Q ss_pred HHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHH
Q 001973 288 EESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAG 327 (988)
Q Consensus 288 ~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~ 327 (988)
++.++.++++|+.+|.+++++ ++-.....++++..+-..
T Consensus 183 ~~~~~~v~~l~~~~G~~v~~~-~~~~hD~~~a~~s~lph~ 221 (314)
T 3ggo_A 183 KKRLKLVKRVWEDVGGVVEYM-SPELHDYVFGVVSHLPHA 221 (314)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEc-CHHHHHHHHHHHHHHHHH
Confidence 899999999999999998874 666777788777655444
No 64
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.70 E-value=3e-16 Score=171.93 Aligned_cols=193 Identities=16% Similarity=0.105 Sum_probs=145.1
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-----------C--------------CcccCCHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-----------G--------------GLIANSPAEA 199 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-----------G--------------~~~~~s~~e~ 199 (988)
+++||+|||+|.||..||..|+++|++|++||+++++++.+.+. | +..++++.++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 35799999999999999999999999999999999988776653 2 4567889999
Q ss_pred hccCcEEEEEcCChHHH-HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHh--cCCCceEecCcccCCccccc
Q 001973 200 AKDVGVLVIMVTNEAQA-ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQF--EGKDLKLVDAPVSGGVKRAS 276 (988)
Q Consensus 200 ~~~aDvV~l~vp~~~~~-~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~--~~~g~~~ldapv~g~~~~a~ 276 (988)
+++||+||+|+|...++ +.++ +++.+.+++++++++.++..+. .++++.+.. ...+.||.+ | +.
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~---~~l~~~~~~~~il~s~tS~~~~--~~la~~~~~~~~~ig~h~~~-p-------~~ 149 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIY---TKLGELAPAKTIFATNSSTLLP--SDLVGYTGRGDKFLALHFAN-H-------VW 149 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHH---HHHHHHSCTTCEEEECCSSSCH--HHHHHHHSCGGGEEEEEECS-S-------TT
T ss_pred hccCCEEEEeccCcHHHHHHHH---HHHHhhCCCCcEEEECCCCCCH--HHHHhhcCCCcceEEEccCC-C-------cc
Confidence 99999999999987544 4444 5677888999999965544442 244554432 112445443 2 23
Q ss_pred CCCeEEEEeC---CHHHHHHHHHHHHhcCCeEEEEe-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 001973 277 MGELTIMAAG---TEESLKSTGSVLSALSEKLYVIK-GGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFN 352 (988)
Q Consensus 277 ~g~l~~~~gg---~~~~~~~~~~ll~~~g~~v~~~~-g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~ 352 (988)
.+.++.++.+ +++.++.++++++.+|++++++. ..+|. ++|+++. ..++|++.++++.+++++++.+
T Consensus 150 ~~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~~g~-----i~nr~~~----~~~~ea~~l~~~g~~~~~~id~ 220 (283)
T 4e12_A 150 VNNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGY-----VLNSLLV----PLLDAAAELLVDGIADPETIDK 220 (283)
T ss_dssp TSCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCCTTT-----THHHHHH----HHHHHHHHHHHTTSCCHHHHHH
T ss_pred cCceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCCCCE-----EehHHHH----HHHHHHHHHHHhCCCCHHHHHH
Confidence 4555666665 68999999999999999988852 23342 4566654 3689999999999999999999
Q ss_pred HHHhcCC
Q 001973 353 IITDSGG 359 (988)
Q Consensus 353 ~l~~~~~ 359 (988)
++..+.+
T Consensus 221 ~~~~~~g 227 (283)
T 4e12_A 221 TWRIGTG 227 (283)
T ss_dssp HHHHHHC
T ss_pred HHHhccC
Confidence 9876544
No 65
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.70 E-value=3.3e-16 Score=168.14 Aligned_cols=203 Identities=17% Similarity=0.204 Sum_probs=142.5
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC----eEEEEeCChhHHHHHHh-cCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF----TVIGYDVYRPTLTKFQN-VGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~----~V~v~dr~~~~~~~l~~-~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
|||+|||+|+||.+|+.+|.++|| +|++|||++++.+.+.+ .|+..++++.++++++|+||+|+|. ..+++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~-~~~~~v~- 80 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKP-DLYASII- 80 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCT-TTHHHHC-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCH-HHHHHHH-
Confidence 689999999999999999999998 99999999999999875 4999899999999999999999975 5588887
Q ss_pred cccchhhhCCCCCEEEec-CCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEE--eCCHHHHHHHHHHH
Q 001973 222 GDLGAVSALSSGASIILS-STVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMA--AGTEESLKSTGSVL 298 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~-st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~--gg~~~~~~~~~~ll 298 (988)
+++.+.++++++||.. ++.++. .+.+.+.. +..++.. +...|.....|...++. +++++.++.++++|
T Consensus 81 --~~l~~~l~~~~~vvs~~~gi~~~---~l~~~~~~---~~~~v~~-~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 151 (247)
T 3gt0_A 81 --NEIKEIIKNDAIIVTIAAGKSIE---STENAFNK---KVKVVRV-MPNTPALVGEGMSALCPNEMVTEKDLEDVLNIF 151 (247)
T ss_dssp -----CCSSCTTCEEEECSCCSCHH---HHHHHHCS---CCEEEEE-ECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHH
T ss_pred --HHHHhhcCCCCEEEEecCCCCHH---HHHHHhCC---CCcEEEE-eCChHHHHcCceEEEEeCCCCCHHHHHHHHHHH
Confidence 5777888889998854 555543 34444432 2333321 11222233334444444 36889999999999
Q ss_pred HhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHhcCCCcccc
Q 001973 299 SALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAF-GARLGLNTRVLFNIITDSGGSSWMF 364 (988)
Q Consensus 299 ~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l-a~~~Gid~~~~~~~l~~~~~~s~~~ 364 (988)
+.+|. ++++ ++-.......+.... -.++..+.|++.. +.+.|+|++++.+++.++...++.+
T Consensus 152 ~~~G~-~~~~-~e~~~d~~~a~~g~g--pa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~ 214 (247)
T 3gt0_A 152 NSFGQ-TEIV-SEKLMDVVTSVSGSS--PAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKM 214 (247)
T ss_dssp GGGEE-EEEC-CGGGHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCC-EEEe-CHHHccHHHHHhccH--HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 99998 5554 322222222222111 1234456777766 8999999999999999887555543
No 66
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.69 E-value=2.9e-16 Score=171.59 Aligned_cols=252 Identities=13% Similarity=0.081 Sum_probs=170.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC---eEEEEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF---TVIGYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
+|||+|||+|+||.+|+..|.++|+ +|++|||++++.+.+.+. |+..+++..++++++|+||+|||. ..+++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p-~~~~~vl- 80 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP-HQIKMVC- 80 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG-GGHHHHH-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH-HHHHHHH-
Confidence 4799999999999999999999999 999999999999999886 888889999999999999999985 6688888
Q ss_pred cccchhhh-CCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeC---CHHHHHHHHHH
Q 001973 222 GDLGAVSA-LSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAG---TEESLKSTGSV 297 (988)
Q Consensus 222 ~~~~i~~~-l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~l 297 (988)
+++.+. ++++++||..++..+. ..+.+.+.. +.+++.+ +...|.....|. +.++.+ +++.++.++++
T Consensus 81 --~~l~~~~l~~~~iiiS~~agi~~--~~l~~~l~~---~~~vvr~-mPn~p~~v~~g~-~~l~~~~~~~~~~~~~v~~l 151 (280)
T 3tri_A 81 --EELKDILSETKILVISLAVGVTT--PLIEKWLGK---ASRIVRA-MPNTPSSVRAGA-TGLFANETVDKDQKNLAESI 151 (280)
T ss_dssp --HHHHHHHHTTTCEEEECCTTCCH--HHHHHHHTC---CSSEEEE-ECCGGGGGTCEE-EEEECCTTSCHHHHHHHHHH
T ss_pred --HHHHhhccCCCeEEEEecCCCCH--HHHHHHcCC---CCeEEEE-ecCChHHhcCcc-EEEEeCCCCCHHHHHHHHHH
Confidence 577777 7888888876554442 345555542 2334332 112233333333 444443 57899999999
Q ss_pred HHhcCCeEEEEeCCcchHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCcc-cccc--cccccc
Q 001973 298 LSALSEKLYVIKGGCGAGSGVKM--ANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIITDSGGSSW-MFEN--RVPHML 372 (988)
Q Consensus 298 l~~~g~~v~~~~g~~g~a~~~Kl--~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~~~~~s~-~~~~--~~~~~~ 372 (988)
|+.+|+.+ ++.++-......-+ ..+.+...++.++.|+ +.+.|+++++..+++.++...+. +... ..|..+
T Consensus 152 ~~~iG~~~-~v~~E~~~d~~talsgsgpa~~~~~~eal~~a---~v~~Gl~~~~a~~l~~~t~~G~a~~~~~~~~~p~~l 227 (280)
T 3tri_A 152 MRAVGLVI-WVSSEDQIEKIAALSGSGPAYIFLIMEALQEA---AEQLGLTKETAELLTEQTVLGAARMALETEQSVVQL 227 (280)
T ss_dssp HGGGEEEE-ECSSHHHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHCCCeE-EECCHHHhhHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 99999744 43222111111111 2234444555555555 67999999999998887643322 2211 112212
Q ss_pred -CCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHc
Q 001973 373 -DNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAA 419 (988)
Q Consensus 373 -~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~ 419 (988)
+.-.+|+.+. ...++..++.|++..+.+++...++++.+-
T Consensus 228 ~~~v~spgGtT-------~~~l~~le~~g~~~~~~~av~aa~~r~~el 268 (280)
T 3tri_A 228 RQFVTSPGGTT-------EQAIKVLESGNLRELFIKALTAAVNRAKEL 268 (280)
T ss_dssp HHHHCCTTSHH-------HHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCChHH-------HHHHHHHHHCChHHHHHHHHHHHHHHHHHH
Confidence 1223454442 234566688899999999999988888764
No 67
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.69 E-value=1.1e-15 Score=167.18 Aligned_cols=177 Identities=21% Similarity=0.254 Sum_probs=142.4
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHHHHhcCCc--ccCCHHHHhc-cCcEEEEEcCChHHHHHHHc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTKFQNVGGL--IANSPAEAAK-DVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~~G~~--~~~s~~e~~~-~aDvV~l~vp~~~~~~~vl~ 221 (988)
|||+|||+|.||..+|..|.++|+ +|++|||++++.+.+.+.|.. .++++.++++ ++|+||+|+|... +.+++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~- 79 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT-FREIA- 79 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHH-HHHHH-
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHH-HHHHH-
Confidence 689999999999999999999999 999999999999988888874 3668888898 9999999999864 66676
Q ss_pred cccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec-CcccC----Cccccc----CCCeEEEE---eCCHH
Q 001973 222 GDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD-APVSG----GVKRAS----MGELTIMA---AGTEE 289 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld-apv~g----~~~~a~----~g~l~~~~---gg~~~ 289 (988)
+++.+.++++.+|++++++.+...+.+.+.++.. ++. .|+.+ +|..+. .+..++++ +++++
T Consensus 80 --~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~-----~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~ 152 (281)
T 2g5c_A 80 --KKLSYILSEDATVTDQGSVKGKLVYDLENILGKR-----FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKK 152 (281)
T ss_dssp --HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGG-----EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHH
T ss_pred --HHHHhhCCCCcEEEECCCCcHHHHHHHHHhcccc-----ceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHH
Confidence 4677788899999999999888777787777541 444 35544 344443 56666776 67889
Q ss_pred HHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHH
Q 001973 290 SLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASA 333 (988)
Q Consensus 290 ~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~ 333 (988)
.++.++++|+.+|.++++ .++.....++|++.|....+...++
T Consensus 153 ~~~~v~~l~~~~g~~~~~-~~~~~~d~~~~~~~~~~~~~a~~~~ 195 (281)
T 2g5c_A 153 RLKLVKRVWEDVGGVVEY-MSPELHDYVFGVVSHLPHAVAFALV 195 (281)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEE-cCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998887 4667778999999988765434333
No 68
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.68 E-value=1.1e-15 Score=170.33 Aligned_cols=248 Identities=15% Similarity=0.139 Sum_probs=170.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc-------------ccCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL-------------IANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~-------------~~~s~~e~~~~aDvV~l~vp~ 212 (988)
+|||+|||+|.||+.+|..|+++|++|++| +++++++.+++.|.. .++++++ +.++|+||+|||.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vilavk~ 96 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA-VQGADLVLFCVKS 96 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG-GTTCSEEEECCCG
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEEEEccc
Confidence 479999999999999999999999999999 999999999886642 2455544 5799999999998
Q ss_pred hHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCc-----ccCCcccccC-CCeEEEEeC
Q 001973 213 EAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAP-----VSGGVKRASM-GELTIMAAG 286 (988)
Q Consensus 213 ~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldap-----v~g~~~~a~~-g~l~~~~gg 286 (988)
. ++++++ +.+.+.+.++++||.++++.... ..+.+.++ -..+.+. +..+|..+.. +.-.+.+|.
T Consensus 97 ~-~~~~~l---~~l~~~l~~~~~iv~~~nGi~~~-~~l~~~~~-----~~vl~g~~~~~a~~~gP~~~~~~~~g~~~ig~ 166 (318)
T 3hwr_A 97 T-DTQSAA---LAMKPALAKSALVLSLQNGVENA-DTLRSLLE-----QEVAAAVVYVATEMAGPGHVRHHGRGELVIEP 166 (318)
T ss_dssp G-GHHHHH---HHHTTTSCTTCEEEEECSSSSHH-HHHHHHCC-----SEEEEEEEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred c-cHHHHH---HHHHHhcCCCCEEEEeCCCCCcH-HHHHHHcC-----CcEEEEEEEEeEEEcCCeEEEEcCCceEEEcC
Confidence 7 588888 67888888999998876654322 34555542 1122111 1122322221 111233444
Q ss_pred CHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcCC
Q 001973 287 TEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAG---------------------VHIASAAEAMAFGARLGL 345 (988)
Q Consensus 287 ~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~---------------------~~~~~~~Ea~~la~~~Gi 345 (988)
.+..+.++++|+..+.++++ ..++-...|.|++.|+..+ ++...+.|+..++++.|+
T Consensus 167 -~~~~~~l~~~l~~~~~~~~~-~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G~ 244 (318)
T 3hwr_A 167 -TSHGANLAAIFAAAGVPVET-SDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGV 244 (318)
T ss_dssp -CTTTHHHHHHHHHTTCCEEE-CSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred -CHHHHHHHHHHHhCCCCcEe-chHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcCC
Confidence 45567899999999988877 6899999999998886443 455678899999999997
Q ss_pred C-----HHHHHHHHHhcC-CCccccccc-cccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH
Q 001973 346 N-----TRVLFNIITDSG-GSSWMFENR-VPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSA 418 (988)
Q Consensus 346 d-----~~~~~~~l~~~~-~~s~~~~~~-~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~ 418 (988)
+ .+.+.+++.... ..|.++... ..+...-|+. .+++++.++++|+++|..+.++++++....
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~sSM~qD~~~gr~tEid~i-----------~G~vv~~a~~~gv~tP~~~~l~~ll~~~e~ 313 (318)
T 3hwr_A 245 KLPDDVALAIRRIAETMPRQSSSTAQDLARGKRSEIDHL-----------NGLIVRRGDALGIPVPANRVLHALVRLIED 313 (318)
T ss_dssp CCCTTHHHHHHHHHHHSTTCCCHHHHHHHTTCCCSGGGT-----------HHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHhcCCCCcHHHHHHHcCChhHHHHH-----------HHHHHHHHHHhCCCCcHHHHHHHHHHHHHh
Confidence 5 233444443322 222222211 1111111111 368899999999999999999998876543
No 69
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.68 E-value=6.1e-16 Score=177.98 Aligned_cols=188 Identities=14% Similarity=0.124 Sum_probs=139.5
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHH--------HHHHhcCC-------------cccCCHHHHhccC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTL--------TKFQNVGG-------------LIANSPAEAAKDV 203 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~--------~~l~~~G~-------------~~~~s~~e~~~~a 203 (988)
..+||+|||+|.||.+||.+|+++|++|++||+++++. +++.+.|. +.+++++ ++++|
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~a 131 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH-KLSNC 131 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG-GCTTC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH-HHccC
Confidence 34799999999999999999999999999999999843 23444443 3567775 68899
Q ss_pred cEEEEEcCChHHHHHHHccccchhhhCCCCCEEEec-CCCCHHHHHHHHHHHH--hcCCCceEecCcccCCcccccCCCe
Q 001973 204 GVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILS-STVSPGFVSQLERRLQ--FEGKDLKLVDAPVSGGVKRASMGEL 280 (988)
Q Consensus 204 DvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~-st~~p~~~~~l~~~l~--~~~~g~~~ldapv~g~~~~a~~g~l 280 (988)
|+||+|||...+++..++ .++.+.++++++|++. ||.++. ++++.+. +...|.||++ |+. ...+
T Consensus 132 DlVIeAVpe~~~vk~~v~--~~l~~~~~~~aIlasnTSsl~i~---~ia~~~~~p~r~iG~Hffn-Pv~-------~m~L 198 (460)
T 3k6j_A 132 DLIVESVIEDMKLKKELF--ANLENICKSTCIFGTNTSSLDLN---EISSVLRDPSNLVGIHFFN-PAN-------VIRL 198 (460)
T ss_dssp SEEEECCCSCHHHHHHHH--HHHHTTSCTTCEEEECCSSSCHH---HHHTTSSSGGGEEEEECCS-STT-------TCCE
T ss_pred CEEEEcCCCCHHHHHHHH--HHHHhhCCCCCEEEecCCChhHH---HHHHhccCCcceEEEEecc-hhh-------hCCE
Confidence 999999998776655444 5788889999999765 555543 3443332 1223567766 432 2344
Q ss_pred EEEEeC---CHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 001973 281 TIMAAG---TEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIIT 355 (988)
Q Consensus 281 ~~~~gg---~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~ 355 (988)
+.++.| +++.++.+.++++.+|+.++++.+.+| .++|+++.. +++|++.++++.|++++++.+++.
T Consensus 199 vEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pG-----fi~Nril~~----~~~EA~~l~~~~Ga~~e~ID~a~~ 267 (460)
T 3k6j_A 199 VEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKS-----FVFNRLLHV----YFDQSQKLMYEYGYLPHQIDKIIT 267 (460)
T ss_dssp EEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCH-----HHHHHHHHH----HHHHHHHHHHTSCCCHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccH-----HHHHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHH
Confidence 555544 789999999999999999988533333 256666654 589999999999999999999886
No 70
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.68 E-value=1.2e-15 Score=171.43 Aligned_cols=254 Identities=16% Similarity=0.156 Sum_probs=172.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc-------------cCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI-------------ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-------------~~s~~e~~~~aDvV~l~vp~ 212 (988)
+|||+|||+|.||+.+|..|+++|++|++|+|+ ++.+.+++.|... ++++++ +..+|+||+|||.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 479999999999999999999999999999996 6788888777532 456666 5899999999998
Q ss_pred hHHHHHHHccccchhhhCCCCCEEEecCCCCH------------------HHHHHHHHHHHhcCCCceEecCc-----cc
Q 001973 213 EAQAESVLYGDLGAVSALSSGASIILSSTVSP------------------GFVSQLERRLQFEGKDLKLVDAP-----VS 269 (988)
Q Consensus 213 ~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p------------------~~~~~l~~~l~~~~~g~~~ldap-----v~ 269 (988)
. ++++++ +.+.+.+.++++||.++++.+ +..+.+.+.++. -+++.+- ..
T Consensus 81 ~-~~~~~~---~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~----~~v~~gv~~~~a~~ 152 (335)
T 3ghy_A 81 P-ALESVA---AGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPT----RHVLGCVVHLTCAT 152 (335)
T ss_dssp H-HHHHHH---GGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCG----GGEEEEEECCCEEE
T ss_pred h-hHHHHH---HHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCc----ccEEEEEEEEEEEE
Confidence 5 578888 678888889999999887732 222344555432 1222221 11
Q ss_pred CCccccc-CCCeEEEEe----CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHH--------------------
Q 001973 270 GGVKRAS-MGELTIMAA----GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQL-------------------- 324 (988)
Q Consensus 270 g~~~~a~-~g~l~~~~g----g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~-------------------- 324 (988)
.+|..+. .+.-.+.+| .+.+..+.+..+|+..+.++++ ..++-...|.|++.|+
T Consensus 153 ~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~-~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~ 231 (335)
T 3ghy_A 153 VSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAEC-SEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDP 231 (335)
T ss_dssp SSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEE-CSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSH
T ss_pred cCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEe-CchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcCh
Confidence 1222221 122234444 3457788899999999988876 6899999999976553
Q ss_pred -HHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHhcCCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhC
Q 001973 325 -LAGVHIASAAEAMAFGARLGLN----TRVLFNIITDSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQ 399 (988)
Q Consensus 325 -~~~~~~~~~~Ea~~la~~~Gid----~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~ 399 (988)
...++..++.|+.+++++.|++ .+.+.+++...... .+.|+ .|+..+..-.+.-.=.+++++.++++
T Consensus 232 ~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~-------~sSM~-qD~~~gr~~tEid~i~G~vv~~a~~~ 303 (335)
T 3ghy_A 232 LVSAFCLAVMAEAKAIGARIGCPIEQSGEARSAVTRQLGAF-------KTSML-QDAEAGRGPLEIDALVASVREIGLHV 303 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCCSCHHHHHHHHHTTCSC-------CCTTT-C-----CCCCCHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHhccCCC-------CcHHH-HHHHcCCCCchHHHHhhHHHHHHHHh
Confidence 2346678899999999999975 34444444432211 11122 22222110111222357889999999
Q ss_pred CCCchHHHHHHHHHHHHHH
Q 001973 400 RVPLHISTIAHQLFLAGSA 418 (988)
Q Consensus 400 gi~~pi~~a~~~~~~~a~~ 418 (988)
|+++|.++.++++++...+
T Consensus 304 gv~~P~~~~l~~li~~~e~ 322 (335)
T 3ghy_A 304 GVPTPQIDTLLGLVRLHAQ 322 (335)
T ss_dssp TCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHh
Confidence 9999999999999887554
No 71
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.64 E-value=6.3e-15 Score=161.04 Aligned_cols=194 Identities=18% Similarity=0.231 Sum_probs=146.1
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc--ccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL--IANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~--~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
|||+|||+|.||..++..|.++|++|++|||++++.+.+.+.|.. .++++.++ .++|+||+|+|.. .++.++ +
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~-~~~~~~---~ 75 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQ-LILPTL---E 75 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHH-HHHHHH---H
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHH-HHHHHH---H
Confidence 589999999999999999999999999999999999998887763 46788888 8999999999964 577777 5
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC-cccC----Cccccc----CCCeEEEEe---CCHHHHH
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA-PVSG----GVKRAS----MGELTIMAA---GTEESLK 292 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda-pv~g----~~~~a~----~g~l~~~~g---g~~~~~~ 292 (988)
.+.+.++++++|++++++.+...+.+.+.+. +++.+ |+.| +|..+. .+..++++. ++++..+
T Consensus 76 ~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~------~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~ 149 (279)
T 2f1k_A 76 KLIPHLSPTAIVTDVASVKTAIAEPASQLWS------GFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLA 149 (279)
T ss_dssp HHGGGSCTTCEEEECCSCCHHHHHHHHHHST------TCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHH
T ss_pred HHHhhCCCCCEEEECCCCcHHHHHHHHHHhC------CEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHH
Confidence 7778888999999998888877666555432 34444 5543 444433 354555553 4788999
Q ss_pred HHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHHh
Q 001973 293 STGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLN--TRVLFNIITD 356 (988)
Q Consensus 293 ~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid--~~~~~~~l~~ 356 (988)
.++++|+.+|.++++ .++.....+.|++.|.-..+.. ++.++ +...|.+ .+....++..
T Consensus 150 ~v~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~p~~i~~-al~~~---~~~~~~~~~~~~~~~l~~~ 210 (279)
T 2f1k_A 150 CLRSVLEPLGVKIYL-CTPADHDQAVAWISHLPVMVSA-ALIQA---CAGEKDGDILKLAQNLASS 210 (279)
T ss_dssp HHHHHHGGGTCEEEE-CCHHHHHHHHHHHTHHHHHHHH-HHHHH---HHTCSCHHHHHHHHHHCCH
T ss_pred HHHHHHHHcCCEEEE-cCHHHHHHHHHHHhhHHHHHHH-HHHHH---HHhcccccchhHHHhhcCC
Confidence 999999999998887 4778889999999997554433 33333 3445655 4555555443
No 72
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.64 E-value=3.8e-15 Score=166.12 Aligned_cols=249 Identities=14% Similarity=0.045 Sum_probs=168.5
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc---------------ccCCHHHHhccCcEEEEEcC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL---------------IANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~---------------~~~s~~e~~~~aDvV~l~vp 211 (988)
|||+|||+|.||+.+|..|+++|++|++|+|++ .+.+++.|++ .+++++++.+.+|+||+|||
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilavK 80 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCIK 80 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEecC
Confidence 699999999999999999999999999999987 3677765532 24566776668999999999
Q ss_pred ChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCC------eEEEEe
Q 001973 212 NEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGE------LTIMAA 285 (988)
Q Consensus 212 ~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~------l~~~~g 285 (988)
... +++++ +.+.+.+.++++||.+.++.. ..+.+.+.++. -.++.+|++.+......+. -.+.+|
T Consensus 81 ~~~-~~~~l---~~l~~~l~~~t~Iv~~~nGi~-~~~~l~~~~~~----~~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig 151 (320)
T 3i83_A 81 VVE-GADRV---GLLRDAVAPDTGIVLISNGID-IEPEVAAAFPD----NEVISGLAFIGVTRTAPGEIWHQAYGRLMLG 151 (320)
T ss_dssp CCT-TCCHH---HHHTTSCCTTCEEEEECSSSS-CSHHHHHHSTT----SCEEEEEEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CCC-hHHHH---HHHHhhcCCCCEEEEeCCCCC-hHHHHHHHCCC----CcEEEEEEEeceEEcCCCEEEECCCCEEEEe
Confidence 876 55565 567778888898888776532 11344554433 3566666554322222222 224443
Q ss_pred ----CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHH
Q 001973 286 ----GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAG--------------------VHIASAAEAMAFGA 341 (988)
Q Consensus 286 ----g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~--------------------~~~~~~~Ea~~la~ 341 (988)
.+.+..+.+..+|+..+.++++ ..++-...|.|++-|+..+ ++..++.|+.++++
T Consensus 152 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~~~va~ 230 (320)
T 3i83_A 152 NYPGGVSERVKTLAAAFEEAGIDGIA-TENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEIRAVAA 230 (320)
T ss_dssp ESSSCCCHHHHHHHHHHHHTTSCEEE-CSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHhCCCCceE-CHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 3457788999999999988877 6899999999998875322 45567899999999
Q ss_pred HcCCCH-----HHHHHHHHhcC-CCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 001973 342 RLGLNT-----RVLFNIITDSG-GSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLA 415 (988)
Q Consensus 342 ~~Gid~-----~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~ 415 (988)
+.|++. +.+.++..... ..+.++... ..+.... ++ .=.+++++.++++|+++|+.+.++++++.
T Consensus 231 a~G~~l~~~~~~~~~~~~~~~~~~~sSM~qD~----~~gr~tE---id---~i~G~vv~~a~~~gv~~P~~~~l~~~l~~ 300 (320)
T 3i83_A 231 ANGHPLPEDIVEKNVASTYKMPPYKTSMLVDF----EAGQPME---TE---VILGNAVRAGRRTRVAIPHLESVYALMKL 300 (320)
T ss_dssp HTTCCCCTTHHHHHHHHHHHSCCCCCHHHHHH----HHTCCCC---HH---HHTHHHHHHHHHTTCCCHHHHHHHHHHHH
T ss_pred HcCCCCChHHHHHHHHHHhcCCCCCCcHHHHH----HhCCCch---HH---HHccHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 999862 33333333221 111111111 0110010 11 11358899999999999999999998876
Q ss_pred HH
Q 001973 416 GS 417 (988)
Q Consensus 416 a~ 417 (988)
..
T Consensus 301 ~e 302 (320)
T 3i83_A 301 LE 302 (320)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 73
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.63 E-value=2.1e-15 Score=184.75 Aligned_cols=247 Identities=17% Similarity=0.130 Sum_probs=150.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----------cC-------------CcccCCHHHHhc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-----------VG-------------GLIANSPAEAAK 201 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~G-------------~~~~~s~~e~~~ 201 (988)
++||+|||+|.||..||.+|+++||+|++||++++.++...+ .| ++.++++ ++++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~~ 390 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESFR 390 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGGT
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHHC
Confidence 368999999999999999999999999999999998876432 23 2345677 5788
Q ss_pred cCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEec-CCCCHHHHHHHHHHHH--hcCCCceEecCcccCCcccccCC
Q 001973 202 DVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILS-STVSPGFVSQLERRLQ--FEGKDLKLVDAPVSGGVKRASMG 278 (988)
Q Consensus 202 ~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~-st~~p~~~~~l~~~l~--~~~~g~~~ldapv~g~~~~a~~g 278 (988)
+||+||+|||...+++..++ .++.+.+++++++++. ||.++.. +++.+. +...|.||++ |+.. .
T Consensus 391 ~aDlVIeaVpe~~~vk~~v~--~~l~~~~~~~~IlasntStl~i~~---la~~~~~p~~~iG~hf~~-P~~~-------~ 457 (725)
T 2wtb_A 391 DVDMVIEAVIENISLKQQIF--ADLEKYCPQHCILASNTSTIDLNK---IGERTKSQDRIVGAHFFS-PAHI-------M 457 (725)
T ss_dssp TCSEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHHH---HTTTCSCTTTEEEEEECS-STTT-------C
T ss_pred CCCEEEEcCcCCHHHHHHHH--HHHHhhCCCCcEEEeCCCCCCHHH---HHHHhcCCCCEEEecCCC-Cccc-------C
Confidence 99999999999887755544 5677889999998765 4554432 333321 1123567765 4322 2
Q ss_pred CeEEEEeC---CHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 001973 279 ELTIMAAG---TEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIIT 355 (988)
Q Consensus 279 ~l~~~~gg---~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~ 355 (988)
.++.++.| +++.++.+.++++.+|+.++++.+.+|. ++|+++. .+++|++.++++ |++++++.+++
T Consensus 458 ~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf-----i~Nril~----~~~~Ea~~l~~~-G~~~e~id~~~- 526 (725)
T 2wtb_A 458 PLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVVVGNCTGF-----AVNRMFF----PYTQAAMFLVEC-GADPYLIDRAI- 526 (725)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESSTTT-----THHHHHH----HHHHHHHHHHHT-TCCHHHHHHHH-
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHhCCEEEEECCCccH-----HHHHHHH----HHHHHHHHHHHC-CCCHHHHHHHH-
Confidence 34555555 7899999999999999998886444442 4555554 469999999998 99999999988
Q ss_pred hcCCCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCCh
Q 001973 356 DSGGSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDD 426 (988)
Q Consensus 356 ~~~~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~ 426 (988)
.+.+.. + +|- .--|+. .++...+-...+.+...+.....|+++...+.-+...+.|.|.++|
T Consensus 527 ~~~g~p-~----Gp~-~l~D~v---Gld~~~~i~~~~~~~~~~~~~~~~~l~~~v~~g~lG~k~g~GfY~y 588 (725)
T 2wtb_A 527 SKFGMP-M----GPF-RLCDLV---GFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGFYLY 588 (725)
T ss_dssp HHHTCS-S----CHH-HHHHHH---CHHHHHHHHHHHHHHSGGGCCCCTHHHHHHTTC-------------
T ss_pred HHcCCC-C----CHH-HHHHHh---chHHHHHHHHHHHHhcCCccCChHHHHHHHHCCCceecCCceeEeC
Confidence 433221 0 010 000000 1222222222222221121022266666555556667777777776
No 74
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.63 E-value=1.1e-14 Score=161.68 Aligned_cols=255 Identities=11% Similarity=0.044 Sum_probs=166.5
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc--------------ccCCHHHHhccCcEEEEEcCC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL--------------IANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~--------------~~~s~~e~~~~aDvV~l~vp~ 212 (988)
|||+|||+|.||+.+|..|+++|++|++|+|++ .+.+++.|.. .++++++ +..+|+||+|||.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vilavk~ 79 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVGLKT 79 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEECCCG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEecCC
Confidence 689999999999999999999999999999986 4777776642 2245544 6799999999998
Q ss_pred hHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcC--CCceEecCcccCCccccc-CCCeEEEEe----
Q 001973 213 EAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEG--KDLKLVDAPVSGGVKRAS-MGELTIMAA---- 285 (988)
Q Consensus 213 ~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~--~g~~~ldapv~g~~~~a~-~g~l~~~~g---- 285 (988)
.. +++++ +.+.+.+.++++||.+.++-. ..+.+.+.++... .++.+..+-. .+|..+. .+.-.+.+|
T Consensus 80 ~~-~~~~l---~~l~~~l~~~~~iv~l~nGi~-~~~~l~~~~~~~~v~~~~~~~~a~~-~~p~~v~~~~~g~~~ig~~~~ 153 (312)
T 3hn2_A 80 FA-NSRYE---ELIRPLVEEGTQILTLQNGLG-NEEALATLFGAERIIGGVAFLCSNR-GEPGEVHHLGAGRIILGEFLP 153 (312)
T ss_dssp GG-GGGHH---HHHGGGCCTTCEEEECCSSSS-HHHHHHHHTCGGGEEEEEEEEECCB-CSSSEEEECEEEEEEEEESSC
T ss_pred CC-cHHHH---HHHHhhcCCCCEEEEecCCCC-cHHHHHHHCCCCcEEEEEEEeeeEE-cCCcEEEECCCCeEEEecCCC
Confidence 65 66666 577888888999888876542 2234555554310 0111111211 1222221 122223443
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcC
Q 001973 286 GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAG---------------------VHIASAAEAMAFGARLG 344 (988)
Q Consensus 286 g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~---------------------~~~~~~~Ea~~la~~~G 344 (988)
.+.+..+.+..+|+..+.++++ ..++-...|.|++-|+..+ ++..++.|+.+++++.|
T Consensus 154 ~~~~~~~~l~~~l~~~g~~~~~-~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~va~a~G 232 (312)
T 3hn2_A 154 RDTGRIEELAAMFRQAGVDCRT-TDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQG 232 (312)
T ss_dssp CCSHHHHHHHHHHHHTTCCEEE-CSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CccHHHHHHHHHHHhCCCCcEE-ChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHHHHHcC
Confidence 2457788899999999988876 6899999999998776533 45567889999999999
Q ss_pred --CC-----HHHHHHHHHhcC-CCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHH
Q 001973 345 --LN-----TRVLFNIITDSG-GSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAG 416 (988)
Q Consensus 345 --id-----~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a 416 (988)
++ .+.+.++..... ..|.++... ..+.... ++ .=.+++++.++++|+++|+.+.++++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~sSM~qD~----~~gr~tE---id---~i~G~vv~~a~~~gv~~P~~~~l~~ll~~~ 302 (312)
T 3hn2_A 233 LATFIADGYVDDMLEFTDAMGEYKPSMEIDR----EEGRPLE---IA---AIFRTPLAYGAREGIAMPRVEMLATLLEQA 302 (312)
T ss_dssp CSSCCCTTHHHHHHHHHTTSCSCCCHHHHHH----HTTCCCC---HH---HHTHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred CccCCCHHHHHHHHHHHhcCCCCCchHHHHH----HhCCCcc---HH---HHhhHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 64 223333322211 111111111 1111110 11 113588999999999999999999999987
Q ss_pred HHcCC
Q 001973 417 SAAGW 421 (988)
Q Consensus 417 ~~~g~ 421 (988)
...|+
T Consensus 303 ~~~~~ 307 (312)
T 3hn2_A 303 TGEGH 307 (312)
T ss_dssp TTC--
T ss_pred Hhccc
Confidence 77664
No 75
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.63 E-value=1.3e-15 Score=186.56 Aligned_cols=186 Identities=16% Similarity=0.186 Sum_probs=137.5
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHH-----------HhcC-------------CcccCCHHHHh
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKF-----------QNVG-------------GLIANSPAEAA 200 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~G-------------~~~~~s~~e~~ 200 (988)
..+||+|||+|.||.+||.+|+++||+|++||+++++++.. .+.| ++.++++ +++
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 391 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDF 391 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTG
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHH
Confidence 34689999999999999999999999999999999887763 3334 2356677 778
Q ss_pred ccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEec-CCCCHHHHHHHHHHHH--hcCCCceEecCcccCCcccccC
Q 001973 201 KDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILS-STVSPGFVSQLERRLQ--FEGKDLKLVDAPVSGGVKRASM 277 (988)
Q Consensus 201 ~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~-st~~p~~~~~l~~~l~--~~~~g~~~ldapv~g~~~~a~~ 277 (988)
++||+||+|||...+++..++ .++.+.+++++++++. ||.++. ++++.+. +...|.||++ |+. .
T Consensus 392 ~~aDlVIeaV~e~~~vk~~v~--~~l~~~~~~~~IlasntStl~i~---~la~~~~~~~~~ig~hf~~-P~~-------~ 458 (715)
T 1wdk_A 392 GNVDLVVEAVVENPKVKQAVL--AEVENHVREDAILASNTSTISIS---LLAKALKRPENFVGMHFFN-PVH-------M 458 (715)
T ss_dssp GGCSEEEECCCSCHHHHHHHH--HHHHTTSCTTCEEEECCSSSCHH---HHGGGCSCGGGEEEEECCS-STT-------T
T ss_pred CCCCEEEEcCCCCHHHHHHHH--HHHHhhCCCCeEEEeCCCCCCHH---HHHHHhcCccceEEEEccC-Ccc-------c
Confidence 999999999999877765544 5677888899999865 455443 2333331 1123556655 432 2
Q ss_pred CCeEEEEeC---CHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 001973 278 GELTIMAAG---TEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNII 354 (988)
Q Consensus 278 g~l~~~~gg---~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l 354 (988)
+.++.++.| +++.++.+.++++.+|+.++++.+.+|. ++||++. .+++|++.++++ |++++++.+++
T Consensus 459 ~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf-----i~Nril~----~~~~Ea~~l~~~-G~~~~~id~~~ 528 (715)
T 1wdk_A 459 MPLVEVIRGEKSSDLAVATTVAYAKKMGKNPIVVNDCPGF-----LVNRVLF----PYFGGFAKLVSA-GVDFVRIDKVM 528 (715)
T ss_dssp CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEESCTTT-----THHHHHH----HHHHHHHHHHHT-TCCHHHHHHHH
T ss_pred CceEEEEECCCCCHHHHHHHHHHHHHhCCEeEEEcCCCCh-----hhhHHHH----HHHHHHHHHHHC-CCCHHHHHHHH
Confidence 334544544 7899999999999999998886444442 4566554 468999999997 99999999988
No 76
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.62 E-value=7.6e-15 Score=161.36 Aligned_cols=157 Identities=18% Similarity=0.216 Sum_probs=126.0
Q ss_pred CCeEEEEccchHHHHHHHHHHhC--CCeEEEEeCChhHHHHHHhcCC--cccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS--NFTVIGYDVYRPTLTKFQNVGG--LIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~G~--~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
+|||+|||+|+||..+|..|.++ |++|++|||++++.+.+.+.|. ..++++.++++++|+||+|||... .++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~-~~~v~- 83 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKK-TIDFI- 83 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHH-HHHHH-
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHH-HHHHH-
Confidence 46999999999999999999988 6899999999999998888776 356788888899999999999866 47777
Q ss_pred cccchhhh-CCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec-CcccC----Cccccc----CCCeEEEE---eCCH
Q 001973 222 GDLGAVSA-LSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD-APVSG----GVKRAS----MGELTIMA---AGTE 288 (988)
Q Consensus 222 ~~~~i~~~-l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld-apv~g----~~~~a~----~g~l~~~~---gg~~ 288 (988)
+.+.+. ++++++|++++++.+...+.+.+.+.. .+.+++. .|++| ++..+. .|..++++ ++++
T Consensus 84 --~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~--~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~ 159 (290)
T 3b1f_A 84 --KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKD--KPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKP 159 (290)
T ss_dssp --HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTT--SSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCT
T ss_pred --HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccc--cCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCH
Confidence 567777 889999999999988777777777754 3567776 47765 444443 55544444 4678
Q ss_pred HHHHHHHHHHHhcCCeEEEE
Q 001973 289 ESLKSTGSVLSALSEKLYVI 308 (988)
Q Consensus 289 ~~~~~~~~ll~~~g~~v~~~ 308 (988)
+.++.++++|+.+|.+++++
T Consensus 160 ~~~~~v~~l~~~~G~~~~~~ 179 (290)
T 3b1f_A 160 NTIPALQDLLSGLHARYVEI 179 (290)
T ss_dssp THHHHHHHHTGGGCCEEEEC
T ss_pred HHHHHHHHHHHHcCCEEEEc
Confidence 89999999999999988774
No 77
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=99.62 E-value=5.4e-16 Score=174.54 Aligned_cols=259 Identities=12% Similarity=0.029 Sum_probs=173.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC--------eEEEEeCChhH-----HHHHHhc--------------CCcccCCHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF--------TVIGYDVYRPT-----LTKFQNV--------------GGLIANSPAE 198 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~--------~V~v~dr~~~~-----~~~l~~~--------------G~~~~~s~~e 198 (988)
..||+|||.|.||++||..|+++|| +|++|.|+++. .+.++.. ++.+++++.+
T Consensus 34 p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~ 113 (391)
T 4fgw_A 34 PFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLID 113 (391)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHH
Confidence 3499999999999999999999875 59999998753 4445442 2346789999
Q ss_pred HhccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCH-HH--HHHHHHHHHhc-CCCceEecCcccCCccc
Q 001973 199 AAKDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSP-GF--VSQLERRLQFE-GKDLKLVDAPVSGGVKR 274 (988)
Q Consensus 199 ~~~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p-~~--~~~l~~~l~~~-~~g~~~ldapv~g~~~~ 274 (988)
+++++|+||++||+.. ++.++ +.+.++++++.++|.++.+.- ++ .+.+.+.+.+. +..+.++.+|-+.....
T Consensus 114 al~~ad~ii~avPs~~-~r~~l---~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~~~~vLsGPs~A~EVa 189 (391)
T 4fgw_A 114 SVKDVDIIVFNIPHQF-LPRIC---SQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGIQCGALSGANIATEVA 189 (391)
T ss_dssp HHTTCSEEEECSCGGG-HHHHH---HHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCCEEEEEECSCCHHHHH
T ss_pred HHhcCCEEEEECChhh-hHHHH---HHhccccCCCceeEEeccccccccccchhHHHHHHHHhCccceeccCCchHHHhh
Confidence 9999999999999855 88888 678888999999999885531 11 12233333332 12234455555444444
Q ss_pred ccCCCeEEEEeCCH---------HHHHHHHHHHHhcCCeEEEEeCC-----------------cchHHHHHHHHHHHHHH
Q 001973 275 ASMGELTIMAAGTE---------ESLKSTGSVLSALSEKLYVIKGG-----------------CGAGSGVKMANQLLAGV 328 (988)
Q Consensus 275 a~~g~l~~~~gg~~---------~~~~~~~~ll~~~g~~v~~~~g~-----------------~g~a~~~Kl~~N~~~~~ 328 (988)
....+.+++++.+. ...+.++.+|+.--.++|. ..+ .|....+++..|+..++
T Consensus 190 ~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~-s~DviGvElgGAlKNViAIAaGi~dGlg~G~NakAAL 268 (391)
T 4fgw_A 190 QEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSV-IEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAI 268 (391)
T ss_dssp TTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEE-ESCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEE-eCCccceehHHHHHHHHHHHHHHHhcCCCCCCHHHHH
Confidence 44455555554432 2346788888766666665 344 25666677889999999
Q ss_pred HHHHHHHHHHHHHHc---CCCHHHHHHHHHhc----CCCcccccccccc-ccCCCCCCCchh------------hHHHHH
Q 001973 329 HIASAAEAMAFGARL---GLNTRVLFNIITDS----GGSSWMFENRVPH-MLDNDYTPYSAL------------DIFVKD 388 (988)
Q Consensus 329 ~~~~~~Ea~~la~~~---Gid~~~~~~~l~~~----~~~s~~~~~~~~~-~~~~~~~~~~~l------------~~~~kD 388 (988)
+..+++|+.+|+.++ |-++.++..+..-| +++| ++|+.-+ .+.+ .+.++ .+....
T Consensus 269 itrGl~Em~rlg~al~~~g~~~tt~~glaGlGDLi~Tc~s--SRNr~~G~~lg~---~G~~~~~~~~~~~~g~v~EGv~t 343 (391)
T 4fgw_A 269 QRVGLGEIIRFGQMFFPESREETYYQESAGVADLITTCAG--GRNVKVARLMAT---SGKDAWECEKELLNGQSAQGLIT 343 (391)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHSTTTHHHHHHHHHS--SHHHHHHHHHHH---TCCCHHHHHHHHHTTCCCTHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCceeecCCCcccceeEEecC--CccHHHHHHHHh---cCCCHHHHHHHHhCCCEEehHHH
Confidence 999999999999998 44554454332222 2223 3443221 1110 01122 234455
Q ss_pred HHHHHHHHHhCCC--CchHHHHHHHHHH
Q 001973 389 MGIIARECLSQRV--PLHISTIAHQLFL 414 (988)
Q Consensus 389 l~~~~~~a~~~gi--~~pi~~a~~~~~~ 414 (988)
.+.+.++++++|+ ++||++++++++.
T Consensus 344 a~~v~~l~~~~~v~~emPI~~~vy~IL~ 371 (391)
T 4fgw_A 344 CKEVHEWLETCGSVEDFPLFEAVYQIVY 371 (391)
T ss_dssp HHHHHHHHHHHTCSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 6688899999999 8999999999987
No 78
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.61 E-value=4e-15 Score=155.65 Aligned_cols=173 Identities=16% Similarity=0.133 Sum_probs=137.2
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-C-------CcccCCHHHHhccCcEEEEEcCChHHHH
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-G-------GLIANSPAEAAKDVGVLVIMVTNEAQAE 217 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G-------~~~~~s~~e~~~~aDvV~l~vp~~~~~~ 217 (988)
|||+||| +|.||..++..|+++|++|++|||++++.+.+.+. + .. .+++.++++++|+||+|+|.. .++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~~-~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPWE-HAI 78 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCHH-HHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCChh-hHH
Confidence 5899999 99999999999999999999999999988877653 3 33 457788889999999999964 467
Q ss_pred HHHccccchhhhCCCCCEEEecCCCCH------------HHHHHHHHHHHhcCCCceEecC--cccCCcccc--cCCCeE
Q 001973 218 SVLYGDLGAVSALSSGASIILSSTVSP------------GFVSQLERRLQFEGKDLKLVDA--PVSGGVKRA--SMGELT 281 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~ivId~st~~p------------~~~~~l~~~l~~~~~g~~~lda--pv~g~~~~a--~~g~l~ 281 (988)
+++ +.+.+.+ ++++++++++... ...+++++.++ +.+++.+ |+.+..... ..+.++
T Consensus 79 ~~~---~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~ 150 (212)
T 1jay_A 79 DTA---RDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE----SEKVVSALHTIPAARFANLDEKFDWD 150 (212)
T ss_dssp HHH---HHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT----CSCEEECCTTCCHHHHHCTTCCCCEE
T ss_pred HHH---HHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC----CCeEEEEccchHHHHhhCcCCCCCcc
Confidence 776 4565656 4899999998332 34667777664 3567777 655554443 567778
Q ss_pred EEEeCC-HHHHHHHHHHHHhc-CCeEEEEeCCcchHHHHHHHHHHHHHHHH
Q 001973 282 IMAAGT-EESLKSTGSVLSAL-SEKLYVIKGGCGAGSGVKMANQLLAGVHI 330 (988)
Q Consensus 282 ~~~gg~-~~~~~~~~~ll~~~-g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~ 330 (988)
++++|+ ++.++.++++|+.+ |.+++++ ++.+.+.++|.+.|++...+.
T Consensus 151 ~~~~g~~~~~~~~v~~l~~~~~G~~~~~~-~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 151 VPVCGDDDESKKVVMSLISEIDGLRPLDA-GPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp EEEEESCHHHHHHHHHHHHHSTTEEEEEE-ESGGGHHHHHTHHHHHHHHHH
T ss_pred EEEECCcHHHHHHHHHHHHHcCCCCceec-cchhHHHHhcchHHHHHHHHH
Confidence 888886 88999999999999 9988774 789999999999998877543
No 79
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.61 E-value=1.5e-15 Score=169.34 Aligned_cols=118 Identities=18% Similarity=0.229 Sum_probs=113.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
++||++.++++++++|++.++++.|+|++.+.++++.+++.||+++.+.+++++++|.| |+++++.||++++.++|++.
T Consensus 200 l~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~~~KDl~~~~~~a~~~ 279 (320)
T 4dll_A 200 LANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSIQLKDMRNALATAQEI 279 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHHHHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhc
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLG 118 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g 118 (988)
|+++|+.+.+.+.|+++.+.|+|++|++++++++++..+
T Consensus 280 g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~ 318 (320)
T 4dll_A 280 GFDAPITGLFEQLYAEGVEHGLTDLDQSGLFVELASRNG 318 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHTTTTTTSBGGGHHHHHHHC--
T ss_pred CCCChHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999988665
No 80
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.61 E-value=9.1e-15 Score=163.08 Aligned_cols=172 Identities=15% Similarity=0.146 Sum_probs=136.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhcc----CcEEEEEcCChHHHHHHHc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKD----VGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~----aDvV~l~vp~~~~~~~vl~ 221 (988)
.+||+|||+|.||.+||.+|.++|++|++|||++++.+.+.+.|+..++++.+++++ +|+||+|||. ..+..++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~-~~~~~vl- 85 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPM-TAIDSLL- 85 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCH-HHHHHHH-
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCH-HHHHHHH-
Confidence 469999999999999999999999999999999999999999999888898887764 7999999995 5678887
Q ss_pred cccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec-CcccCCc-cccc-------CCCeEEEEeC---CHH
Q 001973 222 GDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD-APVSGGV-KRAS-------MGELTIMAAG---TEE 289 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld-apv~g~~-~~a~-------~g~l~~~~gg---~~~ 289 (988)
+++.+. +++.+|+|++++++...+.+.+.+ .+.+|+. .|++|+. .+.. .|..++++.+ +++
T Consensus 86 --~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~----~~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e 158 (341)
T 3ktd_A 86 --DAVHTH-APNNGFTDVVSVKTAVYDAVKARN----MQHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGT 158 (341)
T ss_dssp --HHHHHH-CTTCCEEECCSCSHHHHHHHHHTT----CGGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSC
T ss_pred --HHHHcc-CCCCEEEEcCCCChHHHHHHHHhC----CCCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChh
Confidence 566665 789999999999988777766543 2467887 5888764 2221 3445677654 456
Q ss_pred --------HHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHH
Q 001973 290 --------SLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAG 327 (988)
Q Consensus 290 --------~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~ 327 (988)
.++.++++|+.+|.+++++ ++-.....+.++..+-..
T Consensus 159 ~~~~~~~~~~~~v~~l~~~~Ga~v~~~-~~~~HD~~~A~vshlPh~ 203 (341)
T 3ktd_A 159 DINSTWISIWKDVVQMALAVGAEVVPS-RVGPHDAAAARVSHLTHI 203 (341)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCEEEEC-CHHHHHHHHHHHTHHHHH
T ss_pred hhccchHHHHHHHHHHHHHcCCEEEEe-CHHHHHHHHHHHhHHHHH
Confidence 8999999999999998884 666666777766665443
No 81
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.59 E-value=3.1e-15 Score=157.52 Aligned_cols=167 Identities=13% Similarity=0.172 Sum_probs=124.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEE-EeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIG-YDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v-~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
+|||+|||+|+||.++|..|+++|++|++ |||++++.+++.+. |.....+..+.++++|+||+|+|. ..+++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~-~~~~~v~--- 98 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY-DSIADIV--- 98 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG-GGHHHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh-HHHHHHH---
Confidence 47999999999999999999999999999 99999999887654 776666777778999999999995 5578887
Q ss_pred cchhhhCCCCCEEEecCCCCH------------HHHHHHHHHHHhcC--CCceEecCcccC-CcccccCCCeEEEEeCCH
Q 001973 224 LGAVSALSSGASIILSSTVSP------------GFVSQLERRLQFEG--KDLKLVDAPVSG-GVKRASMGELTIMAAGTE 288 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~~p------------~~~~~l~~~l~~~~--~g~~~ldapv~g-~~~~a~~g~l~~~~gg~~ 288 (988)
..+.+ + ++++||++++..+ ...+.+.+.++... +.+.++.+++.. ++.....+...++.+.++
T Consensus 99 ~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~ 176 (220)
T 4huj_A 99 TQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVPGAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHS 176 (220)
T ss_dssp TTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHSTTCEEEEESCSSCHHHHTSCSBCSSCEEEEEEEESCH
T ss_pred HHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCCCCCEEECCCCCCHHHhhhCcccCCCCeeEEEeCCCH
Confidence 45555 4 5889999997652 15566666664210 112223344444 444333334455666788
Q ss_pred HHHHHHHHHHHhcCCeEEEEeCCcchHHHHH
Q 001973 289 ESLKSTGSVLSALSEKLYVIKGGCGAGSGVK 319 (988)
Q Consensus 289 ~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~K 319 (988)
+..+.++++++.+|.++++ .|+++.+.++.
T Consensus 177 ~~~~~v~~l~~~~G~~~~~-~G~l~~a~~~~ 206 (220)
T 4huj_A 177 DANRQVAELISSLGFAPVD-LGTLAASGPIQ 206 (220)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCSHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEe-eCChhhcchhh
Confidence 9999999999999999988 58888876643
No 82
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.57 E-value=4.7e-15 Score=164.56 Aligned_cols=115 Identities=18% Similarity=0.219 Sum_probs=112.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
++||+++++++.+++|++.++++.|+|++.+.++++.+++.||+++++.+++++++|.| |.++++.||+++++++|++.
T Consensus 192 l~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KDl~~~~~~a~~~ 271 (310)
T 3doj_A 192 LIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDEN 271 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHHHHHHHHHHHHHHHHHc
Confidence 57999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHh
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWEN 115 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~ 115 (988)
|+++|+++.+.++|+++.++|+|++|++++++++++
T Consensus 272 g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~ 307 (310)
T 3doj_A 272 AVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVKF 307 (310)
T ss_dssp TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHC
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHh
Confidence 999999999999999999999999999999999876
No 83
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.57 E-value=2.4e-14 Score=167.13 Aligned_cols=187 Identities=16% Similarity=0.197 Sum_probs=135.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-----------cC-----------CcccCCHHHHhccC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-----------VG-----------GLIANSPAEAAKDV 203 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~G-----------~~~~~s~~e~~~~a 203 (988)
.+||+|||+|.||..||.+|+++||+|++||++++.++.+.+ .| ..+++++ +.+++|
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~a 115 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELSTV 115 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTTC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCCC
Confidence 469999999999999999999999999999999988776543 12 1345666 568899
Q ss_pred cEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHh--cCCCceEecCcccCCcccccCCCeE
Q 001973 204 GVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQF--EGKDLKLVDAPVSGGVKRASMGELT 281 (988)
Q Consensus 204 DvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~--~~~g~~~ldapv~g~~~~a~~g~l~ 281 (988)
|+||+|||...+++..++ .++.+.++++++|++ +|+++... ++++.+.. ...|.||+ +|+. ...++
T Consensus 116 DlVIeaVpe~~~~k~~v~--~~l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf~-~P~~-------~~~lv 183 (463)
T 1zcj_A 116 DLVVEAVFEDMNLKKKVF--AELSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHFF-SPAH-------VMRLL 183 (463)
T ss_dssp SEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEEC-SSTT-------TCCEE
T ss_pred CEEEEcCCCCHHHHHHHH--HHHHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeecC-CCcc-------cceeE
Confidence 999999998765544333 567778889999887 55555444 55554421 11356665 4532 23344
Q ss_pred EEEe---CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 001973 282 IMAA---GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIIT 355 (988)
Q Consensus 282 ~~~g---g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~ 355 (988)
.++. ++++.++.+.++++.+|+.++++.+..|. ++|+++.. +++|++.++++ |++++++.+++.
T Consensus 184 evv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gf-----i~Nrll~~----~~~ea~~l~~~-G~~~~~id~~~~ 250 (463)
T 1zcj_A 184 EVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGF-----VGNRMLAP----YYNQGFFLLEE-GSKPEDVDGVLE 250 (463)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTT-----THHHHHHH----HHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccH-----HHHHHHHH----HHHHHHHHHHc-CCCHHHHHHHHH
Confidence 4444 58899999999999999998885333342 44555543 36999999887 899999999886
No 84
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.55 E-value=1.1e-14 Score=161.21 Aligned_cols=118 Identities=26% Similarity=0.394 Sum_probs=113.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhcccc-------ccccCCCCc-chHHHHHHhHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIP-------NLLRGDAKL-HFLNAFIQNLGIA 72 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~~-f~l~l~~KDl~la 72 (988)
++||++.++++.+++|++.++++.|+|++.+.++++.+.+.||+++.+.| +|+++||.+ |+++++.||++++
T Consensus 174 l~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~kD~~~~ 253 (302)
T 2h78_A 174 VCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQLMAKDLGLA 253 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTCSSSBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCCCCCcHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999 999999999 9999999999999
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhc
Q 001973 73 LDMAKTLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLG 118 (988)
Q Consensus 73 ~~~a~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g 118 (988)
+++|++.|+++|+.+.+.+.|+++.+.|+|++|++++++++++.++
T Consensus 254 ~~~a~~~g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~ 299 (302)
T 2h78_A 254 QEAAQASASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQG 299 (302)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC-
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999988665
No 85
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.55 E-value=8.2e-15 Score=152.99 Aligned_cols=155 Identities=12% Similarity=0.137 Sum_probs=116.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.|||+|||+|.||+++|..|+++|++|++|||+++ +++++|+||+|+| +..+++++ +.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~------------------~~~~aD~vi~av~-~~~~~~v~---~~ 76 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ------------------ATTLGEIVIMAVP-YPALAALA---KQ 76 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC------------------CSSCCSEEEECSC-HHHHHHHH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH------------------HhccCCEEEEcCC-cHHHHHHH---HH
Confidence 36999999999999999999999999999999875 4568999999999 66688887 56
Q ss_pred hhhhCCCCCEEEecCCCCH--H-------H----HHHHHHHHHhcCCCceEec------CcccCCcccccCCCeEEEEeC
Q 001973 226 AVSALSSGASIILSSTVSP--G-------F----VSQLERRLQFEGKDLKLVD------APVSGGVKRASMGELTIMAAG 286 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p--~-------~----~~~l~~~l~~~~~g~~~ld------apv~g~~~~a~~g~l~~~~gg 286 (988)
+.+.++ ++++|++++..+ + + .+.+.+.++ +.+++. +|....+.....+...+++++
T Consensus 77 l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~----~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g 151 (209)
T 2raf_A 77 YATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP----DSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAG 151 (209)
T ss_dssp THHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT----TSEEEECSTTSCHHHHHHSEETTTEECEEEEEE
T ss_pred HHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC----CCcEEEeeecccHhhccccccCCCCCceeEEcC
Confidence 667777 999999988443 1 2 344544442 345665 343333222221234555555
Q ss_pred -CHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHH
Q 001973 287 -TEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGV 328 (988)
Q Consensus 287 -~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~ 328 (988)
+++..+.++++|+.+|.++++ .++++.+.++|.+.|++..+
T Consensus 152 ~~~~~~~~v~~ll~~~G~~~~~-~~~i~~a~~~K~i~~l~~~~ 193 (209)
T 2raf_A 152 NDDSAKQRFTRALADSPLEVKD-AGKLKRARELEAMGFMQMTL 193 (209)
T ss_dssp SCHHHHHHHHHHTTTSSCEEEE-EESGGGHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCceEe-CCCHhHHHHhcchHHHHHHH
Confidence 468899999999999998888 47899999999998887543
No 86
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.55 E-value=1.1e-13 Score=152.66 Aligned_cols=181 Identities=12% Similarity=0.099 Sum_probs=137.3
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+||+||| +|.||.++|..|.+.|++|++|||+++. ++.+++++||+||+|||... ++.++ ++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~-------------~~~~~~~~aDvVilavp~~~-~~~vl---~~ 84 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA-------------VAESILANADVVIVSVPINL-TLETI---ER 84 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG-------------GHHHHHTTCSEEEECSCGGG-HHHHH---HH
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc-------------CHHHHhcCCCEEEEeCCHHH-HHHHH---HH
Confidence 5899999 9999999999999999999999998752 56788899999999999866 78887 57
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC-cccCCcccccCCCeEEEEeC-CHHHHHHHHHHHHhcCC
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA-PVSGGVKRASMGELTIMAAG-TEESLKSTGSVLSALSE 303 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda-pv~g~~~~a~~g~l~~~~gg-~~~~~~~~~~ll~~~g~ 303 (988)
+.+.++++++|+|++++.....+.+.+.+ +.+++.+ |++|+......+..++++.+ +++.++.++++|+.+|.
T Consensus 85 l~~~l~~~~iv~~~~svk~~~~~~~~~~~-----~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~ 159 (298)
T 2pv7_A 85 LKPYLTENMLLADLTSVKREPLAKMLEVH-----TGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQIQIWGA 159 (298)
T ss_dssp HGGGCCTTSEEEECCSCCHHHHHHHHHHC-----SSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHHHHTTC
T ss_pred HHhhcCCCcEEEECCCCCcHHHHHHHHhc-----CCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHHHHHHcCC
Confidence 77888899999999999887666554432 2467765 77776655555665555543 68889999999999999
Q ss_pred eEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 001973 304 KLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNII 354 (988)
Q Consensus 304 ~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l 354 (988)
+++++ ++......++++.+....+... +.|++ ...|++.+...++.
T Consensus 160 ~~~~~-~~~~~d~~~a~~~~~p~~~a~~-l~~~l---~~~g~~~~~~~~la 205 (298)
T 2pv7_A 160 KIYQT-NATEHDHNMTYIQALRHFSTFA-NGLHL---SKQPINLANLLALS 205 (298)
T ss_dssp EEEEC-CHHHHHHHHHHHTHHHHHHHHH-HHHHH---TTSSCCHHHHHHTC
T ss_pred EEEEC-CHHHHHHHHHHHHHHHHHHHHH-HHHHH---HhcCCCHHHHHhhc
Confidence 88874 5566677888887765543222 33332 13788877666543
No 87
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.54 E-value=7e-15 Score=161.41 Aligned_cols=114 Identities=18% Similarity=0.225 Sum_probs=110.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
++||++.+.++.+++|++.++++.|+|++.+.++++.+++.||+++++.+++++++|.| |.++++.||+++++++|++.
T Consensus 172 l~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~ 251 (287)
T 3pef_A 172 LVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRV 251 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchHHHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHH
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWE 114 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~ 114 (988)
|+++|+.+.+.+.|+++.++|+|++|+++++++++
T Consensus 252 g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pef_A 252 GQPLVASAAANELFKGARAAGFGDEDFSAIFKTYE 286 (287)
T ss_dssp TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGGC
T ss_pred CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHh
Confidence 99999999999999999999999999999988764
No 88
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.54 E-value=1e-14 Score=160.04 Aligned_cols=114 Identities=24% Similarity=0.335 Sum_probs=110.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
++||++.+.++.+++|++.++++.|+|++.+.++++.+++.||+++++.+++++++|.| |+++++.||+++++++|++.
T Consensus 172 l~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kd~~~~~~~a~~~ 251 (287)
T 3pdu_A 172 LVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRL 251 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHHHHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHH
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWE 114 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~ 114 (988)
|+++|+.+.+.+.|+++.+.|+|++|+++++++++
T Consensus 252 g~~~p~~~~~~~~~~~a~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pdu_A 252 GQPLHGAATANESFKRARAAGHADEDFAAVFRVLE 286 (287)
T ss_dssp TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHC
T ss_pred CCCChHHHHHHHHHHHHHhcCCCcCCHHHHHHHHh
Confidence 99999999999999999999999999999999875
No 89
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.54 E-value=8.2e-15 Score=162.16 Aligned_cols=116 Identities=34% Similarity=0.662 Sum_probs=110.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
|+||++.+.++.+++|++.++++.|+|++.+.++++.+++.||+++++.+++++++|.| |.++++.||+++++++|++.
T Consensus 180 l~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~kD~~~~~~~a~~~ 259 (303)
T 3g0o_A 180 IIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGLVADTAKAL 259 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhh
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENV 116 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~ 116 (988)
|+++|+.+.+.+.|+++.+.|+|++|+++++++++++
T Consensus 260 g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~ 296 (303)
T 3g0o_A 260 RFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGE 296 (303)
T ss_dssp TCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGC---
T ss_pred CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhc
Confidence 9999999999999999999999999999999988764
No 90
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.29 E-value=6.8e-16 Score=159.93 Aligned_cols=163 Identities=15% Similarity=0.125 Sum_probs=118.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.|||+|||+|.||..+|.+|.+.|++|++|||+++ .+.+...|+... ++.++++++|+||+|+|.. .++.++ +
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~-~~~~v~----~ 91 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHRE-HYDFLA----E 91 (201)
Confidence 36899999999999999999999999999999987 566666676665 7888889999999999985 477665 2
Q ss_pred hhhhCCCCCEEEecCCCCHHH------HHHHHHHHHhcCCCceEecCcccCCcccccCCCe-----EEEEeCCHHHHHHH
Q 001973 226 AVSALSSGASIILSSTVSPGF------VSQLERRLQFEGKDLKLVDAPVSGGVKRASMGEL-----TIMAAGTEESLKST 294 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~------~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l-----~~~~gg~~~~~~~~ 294 (988)
+.+ ..++++||++++..|.. .+.+.+.+.. ...+.+-..-+......|.+ .+++|++++.++.+
T Consensus 92 l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~----~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v 166 (201)
T 2yjz_A 92 LAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG----AHVVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRV 166 (201)
Confidence 332 44789999999988732 2233333321 11111110001112222332 57778888999999
Q ss_pred HHHHHhcCCeEEEEeCCcchHHHHHHH
Q 001973 295 GSVLSALSEKLYVIKGGCGAGSGVKMA 321 (988)
Q Consensus 295 ~~ll~~~g~~v~~~~g~~g~a~~~Kl~ 321 (988)
+++|+.+|.++++ +|+++.+.++|.+
T Consensus 167 ~~ll~~~G~~~~~-~G~l~~a~~~e~~ 192 (201)
T 2yjz_A 167 MDIARTLGLTPLD-QGSLVAAKEIENY 192 (201)
Confidence 9999999999988 5999999999964
No 91
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.53 E-value=7.9e-15 Score=160.00 Aligned_cols=189 Identities=15% Similarity=0.149 Sum_probs=129.8
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeE-EEEeCChhHHHHHHh-cCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTV-IGYDVYRPTLTKFQN-VGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~l~~-~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
|||+|||+|+||..|+..|.++ ++| .+|||++++.+++.+ .|. .++++.++++++|+||+|+|+.. +++++ .
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~-~~~v~---~ 76 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRY-IKTVA---N 76 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTT-HHHHH---T
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHH-HHHHH---H
Confidence 6899999999999999999998 999 599999999988875 366 67788888889999999999876 67776 3
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCccccc-CCCeEEEEeCCHHHHHHHHHHHHhcCC
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRAS-MGELTIMAAGTEESLKSTGSVLSALSE 303 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~-~g~l~~~~gg~~~~~~~~~~ll~~~g~ 303 (988)
++. .++++||++|+..|.... . ....+..+...|+++++.... ...+.++++++++.++.++++++.+|.
T Consensus 77 ~l~---~~~~ivi~~s~~~~~~~l--~----~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~ 147 (276)
T 2i76_A 77 HLN---LGDAVLVHCSGFLSSEIF--K----KSGRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISG 147 (276)
T ss_dssp TTC---CSSCCEEECCSSSCGGGG--C----SSSEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCS
T ss_pred Hhc---cCCCEEEECCCCCcHHHH--H----HhhccccchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHHHHhCC
Confidence 443 578999999977655431 1 110112233456666554444 355567778888889999999999998
Q ss_pred eEEEEeCCcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHH
Q 001973 304 KLYVIKGGCGA---GSGVKMANQLLAGVHIASAAEAMAFGARLGLNTR--VLFNIIT 355 (988)
Q Consensus 304 ~v~~~~g~~g~---a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~--~~~~~l~ 355 (988)
+++++ ++.+. ....+++.|.+. ..+.|+..++++.|++.+ .+.+++.
T Consensus 148 ~~~~v-~~~~~~~~~~~~~l~~n~~~----~~~~~a~~~~~~~Gl~~~~a~~~~l~~ 199 (276)
T 2i76_A 148 KYFVI-PSEKKKAYHLAAVIASNFPV----ALAYLSKRIYTLLGLDEPELLIHTLMK 199 (276)
T ss_dssp CEEEC-CGGGHHHHHHHHHHHHTTHH----HHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CEEEE-CHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 88875 44332 234466777554 347888889999999987 4555444
No 92
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.52 E-value=1.1e-13 Score=145.14 Aligned_cols=171 Identities=16% Similarity=0.118 Sum_probs=123.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+|||+|||+|.||..++..|.+.|++|++|||++++.+.+.+.|+... +..++++++|+||+|+|.. .++.++ +
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~~-~~~~v~---~- 101 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFRE-HYSSLC---S- 101 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCGG-GSGGGG---G-
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCChH-HHHHHH---H-
Confidence 469999999999999999999999999999999999988877777765 7888899999999999964 455555 2
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHH----HHHHHHhcCCCceEec--CcccCCc--ccccCCC-eEEEEeCCHHHHHHHHH
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQ----LERRLQFEGKDLKLVD--APVSGGV--KRASMGE-LTIMAAGTEESLKSTGS 296 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~----l~~~l~~~~~g~~~ld--apv~g~~--~~a~~g~-l~~~~gg~~~~~~~~~~ 296 (988)
+.+.+ ++++||++++..+..... ..+.+.+...+.+++. .++.+.+ .....+. .+++.|++++.++.+++
T Consensus 102 l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ 180 (215)
T 2vns_A 102 LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSE 180 (215)
T ss_dssp GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHH
T ss_pred HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEeccccccHhHhcccccCCceeEEEecCCHHHHHHHHH
Confidence 44445 789999999998755321 1222222112222322 1211110 1111233 46777889999999999
Q ss_pred HHHhcCCeEEEEeCCcchHHHHHHHHHH
Q 001973 297 VLSALSEKLYVIKGGCGAGSGVKMANQL 324 (988)
Q Consensus 297 ll~~~g~~v~~~~g~~g~a~~~Kl~~N~ 324 (988)
+|+.+|.++++ +|+.|++..++.+.++
T Consensus 181 ll~~~G~~~~~-~g~~~~~~~~e~~~~~ 207 (215)
T 2vns_A 181 MALAMGFMPVD-MGSLASAWEVEAMPLR 207 (215)
T ss_dssp HHHHTTCEEEE-CCSGGGHHHHHHSCCB
T ss_pred HHHHcCCceEe-ecchhhhhHhhhhhhh
Confidence 99999999888 5899999998854443
No 93
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.49 E-value=3e-14 Score=156.93 Aligned_cols=246 Identities=15% Similarity=0.093 Sum_probs=160.5
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCC---cccCCHHHHh-ccCcEEEEEcCChHHHHHHHcc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGG---LIANSPAEAA-KDVGVLVIMVTNEAQAESVLYG 222 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~---~~~~s~~e~~-~~aDvV~l~vp~~~~~~~vl~~ 222 (988)
|||+|||+|.||+.+|..|+++|++|++|+|+++.++.....|. ....++.+.+ ..+|+||+|||... +++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~-~~~~l-- 79 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQ-LDAVI-- 79 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGG-HHHHG--
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccC-HHHHH--
Confidence 69999999999999999999999999999999765432222232 1223445554 78999999999864 78887
Q ss_pred ccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCc-----ccCCcccccCCCeEEEEeCCHHHHHHHHHH
Q 001973 223 DLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAP-----VSGGVKRASMGELTIMAAGTEESLKSTGSV 297 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldap-----v~g~~~~a~~g~l~~~~gg~~~~~~~~~~l 297 (988)
+.+.+.+.++++||.+.++...... ++. -+.+.+. ...+|..+..+...+. .++.+..+.+..+
T Consensus 80 -~~l~~~l~~~~~iv~~~nGi~~~~~-----~~~----~~v~~g~~~~~a~~~~pg~v~~~~~~~~-~~~~~~~~~l~~~ 148 (294)
T 3g17_A 80 -PHLTYLAHEDTLIILAQNGYGQLEH-----IPF----KNVCQAVVYISGQKKGDVVTHFRDYQLR-IQDNALTRQFRDL 148 (294)
T ss_dssp -GGHHHHEEEEEEEEECCSSCCCGGG-----CCC----SCEEECEEEEEEEEETTEEEEEEEEEEE-EECSHHHHHHHHH
T ss_pred -HHHHHhhCCCCEEEEeccCcccHhh-----CCC----CcEEEEEEEEEEEEcCCCEEEECCCEEe-cCccHHHHHHHHH
Confidence 6788888888888887765422111 221 1122211 1112222221111122 2456778889999
Q ss_pred HHhcCCeEEEEeCCcchHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHcCCC--HHHHHHHHH
Q 001973 298 LSALSEKLYVIKGGCGAGSGVKMANQLLAG--------------------VHIASAAEAMAFGARLGLN--TRVLFNIIT 355 (988)
Q Consensus 298 l~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~--------------------~~~~~~~Ea~~la~~~Gid--~~~~~~~l~ 355 (988)
|+.-+.++++ ..++-...|.|++-|+..+ ++..++.|+.+++++.|++ .+.+.+.+.
T Consensus 149 l~~~~~~~~~-~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~ 227 (294)
T 3g17_A 149 VQDSQIDIVL-EANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLNFSEQTVDTIMT 227 (294)
T ss_dssp TTTSSCEEEE-ESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHhCCCceEE-ChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHH
Confidence 9998988877 6899999999998887322 3456688999999999975 444444433
Q ss_pred h---cC--CCccccccc-cccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH
Q 001973 356 D---SG--GSSWMFENR-VPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSA 418 (988)
Q Consensus 356 ~---~~--~~s~~~~~~-~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~ 418 (988)
. .+ ..|.++... ..+...-|+. .+++++.++++|+++|..+.++++++...+
T Consensus 228 ~~~~~~~~~~sSM~qD~~~gr~tEid~i-----------~G~vv~~a~~~gv~~P~~~~l~~ll~~~e~ 285 (294)
T 3g17_A 228 IYQGYPDEMGTSMYYDIVHQQPLEVEAI-----------QGFIYRRAREHNLDTPYLDTIYSFLRAYQQ 285 (294)
T ss_dssp HHHTSCTTCCCHHHHHHHTTCCCSGGGT-----------HHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCCCCcHHHHHHcCCCccHHHh-----------hhHHHHHHHHhCCCCChHHHHHHHHHHHHh
Confidence 2 11 112222111 1111111111 368899999999999999999999887654
No 94
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=99.48 E-value=2.1e-14 Score=153.92 Aligned_cols=63 Identities=38% Similarity=0.476 Sum_probs=59.6
Q ss_pred cccccHHHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhcccCHHHHH
Q 001973 919 VRISSTKELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQYITLVT 981 (988)
Q Consensus 919 ~~lv~~~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~~~~~~~ 981 (988)
|||||+++||++|++++|||||||++|+|+++|+++|||+++||||||+++++.+|.|++++.
T Consensus 1 Mmlv~~~~ll~~A~~~~yAv~AfNv~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~ 63 (286)
T 1gvf_A 1 MSIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIY 63 (286)
T ss_dssp -CBCCSHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999976554
No 95
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.47 E-value=3.8e-14 Score=156.88 Aligned_cols=112 Identities=12% Similarity=0.062 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcc--CCchhhhccccccccCCCCc--chHHHHHHhHHHHHHHHHhcC
Q 001973 5 LLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAA--GNSWIFKNYIPNLLRGDAKL--HFLNAFIQNLGIALDMAKTLA 80 (988)
Q Consensus 5 ~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~--~~s~~~~~~~~~~~~~~~~~--f~l~l~~KDl~la~~~a~~~g 80 (988)
+++++++++++|++.+++++|+|++.+.++++.+. +.||+++.+.|++++++|.| |+++++.||+++++++|++.|
T Consensus 181 ~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~KDl~~~~~~a~~~g 260 (306)
T 3l6d_A 181 AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQARLDVHADAFAHIAQSLHAQG 260 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSBHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHcC
Confidence 56778999999999999999999999999999986 79999999999999999998 579999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhh
Q 001973 81 FPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENV 116 (988)
Q Consensus 81 ~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~ 116 (988)
+++|+.+.+.+.|+++.+.|+|++|++++++++++.
T Consensus 261 ~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~~~~ 296 (306)
T 3l6d_A 261 VWTPVFDAVCQVVQRAAAMGYGDQDIAATTKSFARE 296 (306)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGGC--
T ss_pred CCchHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhH
Confidence 999999999999999999999999999999987653
No 96
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=99.46 E-value=3.4e-14 Score=152.18 Aligned_cols=64 Identities=42% Similarity=0.566 Sum_probs=60.1
Q ss_pred CcccccHHHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhcc-cCHHHHH
Q 001973 918 PVRISSTKELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKV-QYITLVT 981 (988)
Q Consensus 918 ~~~lv~~~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~-~~~~~~~ 981 (988)
.|||||+++||++|++++|||||||++|+|+++|+++|||+++||||||+++++.+| .|.+++.
T Consensus 3 ~M~lv~~~~ll~~A~~~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~ 67 (288)
T 3q94_A 3 AMPLVSMKEMLNKALEGKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVV 67 (288)
T ss_dssp -CCCCCSHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHH
T ss_pred cccccCHHHHHHHHHHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999 5887553
No 97
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=99.45 E-value=6.3e-14 Score=151.63 Aligned_cols=63 Identities=32% Similarity=0.520 Sum_probs=59.6
Q ss_pred cccccHHHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhcccCHHHHH
Q 001973 919 VRISSTKELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQYITLVT 981 (988)
Q Consensus 919 ~~lv~~~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~~~~~~~ 981 (988)
|||||+++||++|++++|||||||++|+|+++|+++|||+++||||||+++++.+|.|.+++.
T Consensus 1 M~lv~~~~ll~~A~~~~yAV~AfNv~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~ 63 (323)
T 2isw_A 1 MPLCTLRQMLGEARKHKYGVGAFNVNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLK 63 (323)
T ss_dssp -CBCCHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHH
T ss_pred CCCCCHHHHHHHHHHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999977654
No 98
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=99.44 E-value=5e-14 Score=151.56 Aligned_cols=64 Identities=34% Similarity=0.489 Sum_probs=60.6
Q ss_pred ccccHHHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhcccCHHHHHhh
Q 001973 920 RISSTKELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQYITLVTSS 983 (988)
Q Consensus 920 ~lv~~~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~~~~~~~~~ 983 (988)
||||+++||++|++++|||||||++|+|+++|+++|||+++||||||+++++.+|.|.+++..+
T Consensus 1 mlv~~~~ll~~A~~~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~ 64 (307)
T 3n9r_A 1 MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGM 64 (307)
T ss_dssp CBCCHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999998766443
No 99
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.43 E-value=6.9e-13 Score=146.81 Aligned_cols=245 Identities=14% Similarity=0.065 Sum_probs=149.5
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCC----------HHHHhccCcEEEEEcCChHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANS----------PAEAAKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s----------~~e~~~~aDvV~l~vp~~~~~ 216 (988)
|||+|||+|.||+.+|..|+ +|++|++|+|++++.+.+++.|.....+ ..+....+|+||+|||... +
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~~-~ 80 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQHQ-L 80 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGGG-H
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHHH-H
Confidence 69999999999999999999 9999999999999999998877654311 1245678999999999755 7
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCC-----cc---cccCCCeEEEEe---
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGG-----VK---RASMGELTIMAA--- 285 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~-----~~---~a~~g~l~~~~g--- 285 (988)
++++ +.+.+ +.+++ ||.+.++... .+.+.+.++ .-+++.+-+..+ |. ....|. +.+|
T Consensus 81 ~~~l---~~l~~-~~~~~-ivs~~nGi~~-~e~l~~~~~----~~~vl~g~~~~~a~~~~pg~v~~~~~g~--~~iG~~~ 148 (307)
T 3ego_A 81 QSVF---SSLER-IGKTN-ILFLQNGMGH-IHDLKDWHV----GHSIYVGIVEHGAVRKSDTAVDHTGLGA--IKWSAFD 148 (307)
T ss_dssp HHHH---HHTTS-SCCCE-EEECCSSSHH-HHHHHTCCC----SCEEEEEEECCEEEECSSSEEEEEECCC--EEEEECT
T ss_pred HHHH---HHhhc-CCCCe-EEEecCCccH-HHHHHHhCC----CCcEEEEEEeeceEECCCCEEEEeeeee--EEEEeCC
Confidence 7776 34443 34455 7766665442 223333222 223333322111 11 122233 2333
Q ss_pred CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcC
Q 001973 286 GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAG---------------------VHIASAAEAMAFGARLG 344 (988)
Q Consensus 286 g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~---------------------~~~~~~~Ea~~la~~~G 344 (988)
+..+.++.+...|...+.++.+ ..++-...|.|++.|+..+ ++...+.|+..++++.+
T Consensus 149 ~~~~~~~~l~~~l~~ag~~~~~-~~di~~~~W~Kl~~N~~~N~ltal~~~~~g~l~~~~~~~~l~~~l~~E~~~va~~~~ 227 (307)
T 3ego_A 149 DAEPDRLNILFQHNHSDFPIYY-ETDWYRLLTGKLIVNACINPLTALLQVKNGELLTTPAYLAFMKLVFQEACRILKLEN 227 (307)
T ss_dssp TCCGGGGTTTTSSCCTTSCEEE-CSCHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHSHHHHHHHHHHHHHHHHHHTCSC
T ss_pred CCcHHHHHHHHHhhhCCCCcEe-chhHHHHHHHHHHHhhhhhHHHHHhcCCcchhhcChhHHHHHHHHHHHHHHHHhccC
Confidence 2234444555555555667766 6899999999999887544 33456778888876542
Q ss_pred CCHHHHHH----HHHhcC-CCccccccccccccCCCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH
Q 001973 345 LNTRVLFN----IITDSG-GSSWMFENRVPHMLDNDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSA 418 (988)
Q Consensus 345 id~~~~~~----~l~~~~-~~s~~~~~~~~~~~~~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~ 418 (988)
++.+.+ ++.... ..|.++... ..+..+. ++.+ .+++++.++++|+++|..+.++++++...+
T Consensus 228 --~~~~~~~~~~~~~~~~~~~sSM~qD~----~~gr~tE---id~i---~G~vv~~a~~~gv~tP~~~~l~~li~~~e~ 294 (307)
T 3ego_A 228 --EEKAWERVQAVCGQTKENRSSMLVDV----IGGRQTE---ADAI---IGYLLKEASLQGLDAVHLEFLYGSIKALER 294 (307)
T ss_dssp --HHHHHHHHHHHHHHTTTCCCHHHHHH----HHTCCCS---HHHH---HHHHHHHHHHTTCCCHHHHHHHHHHHHTC-
T ss_pred --hHHHHHHHHHHHHhcCCCCchHHHHH----HcCCccc---HHHh---hhHHHHHHHHcCCCCcHHHHHHHHHHHHHh
Confidence 333333 222111 112221111 0110010 1111 358899999999999999999998886544
No 100
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.42 E-value=9.5e-13 Score=137.66 Aligned_cols=159 Identities=16% Similarity=0.107 Sum_probs=113.7
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
...|||+|||+|.||++||.+|.++||+|++||+. ++ +++|| |+|||+. .+.+++
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------~~-~~~aD--ilavP~~-ai~~vl--- 58 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------ED-IRDFE--LVVIDAH-GVEGYV--- 58 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------GG-GGGCS--EEEECSS-CHHHHH---
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------HH-hccCC--EEEEcHH-HHHHHH---
Confidence 34579999999999999999999999999999983 12 56889 9999997 578887
Q ss_pred cchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec-CcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcC
Q 001973 224 LGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD-APVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALS 302 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld-apv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g 302 (988)
+++.+.++++++|+|+|+..+... .+.+.. .+.+|+. .|+.+.+ .++.+++++.++.++++++.+|
T Consensus 59 ~~l~~~l~~g~ivvd~sgs~~~~v---l~~~~~--~g~~fvg~HPm~g~~--------~~i~a~d~~a~~~l~~L~~~lG 125 (232)
T 3dfu_A 59 EKLSAFARRGQMFLHTSLTHGITV---MDPLET--SGGIVMSAHPIGQDR--------WVASALDELGETIVGLLVGELG 125 (232)
T ss_dssp HHHHTTCCTTCEEEECCSSCCGGG---GHHHHH--TTCEEEEEEEEETTE--------EEEEESSHHHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCCEEEEECCcCHHHH---HHHHHh--CCCcEEEeeeCCCCc--------eeeeCCCHHHHHHHHHHHHHhC
Confidence 578888899999999876544322 222223 4677775 4776543 5566678889999999999999
Q ss_pred CeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 001973 303 EKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARL 343 (988)
Q Consensus 303 ~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~ 343 (988)
.+++++ ++-..... .+.-......+..+.++.++.+..
T Consensus 126 ~~vv~~-~~~~hd~~--~AAvsh~nhLv~L~~~A~~ll~~~ 163 (232)
T 3dfu_A 126 GSIVEI-ADDKRAQL--AAALTYAGFLSTLQRDASYFLDEF 163 (232)
T ss_dssp CEECCC-CGGGHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEe-CHHHHhHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998875 33332222 111112344455677777776443
No 101
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=99.42 E-value=8.8e-14 Score=149.56 Aligned_cols=63 Identities=41% Similarity=0.511 Sum_probs=59.7
Q ss_pred ccccHHHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhcccCHHHHHh
Q 001973 920 RISSTKELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQYITLVTS 982 (988)
Q Consensus 920 ~lv~~~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~~~~~~~~ 982 (988)
||||+++||++|++++|||||||++|+|+++|+++|||+++||||||+++++.+|.|.+++..
T Consensus 1 mlv~~~~ll~~A~~~~yAV~AfNv~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~ 63 (305)
T 1rvg_A 1 MLVTGLEILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLM 63 (305)
T ss_dssp CBCCHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHCCCEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHH
Confidence 699999999999999999999999999999999999999999999999999999999776543
No 102
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=99.38 E-value=4.4e-12 Score=139.40 Aligned_cols=196 Identities=17% Similarity=0.093 Sum_probs=140.6
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHH-----------hcC--------------CcccCCHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQ-----------NVG--------------GLIANSPAEA 199 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~-----------~~G--------------~~~~~s~~e~ 199 (988)
...||+|||+|.||..||..++.+|++|++||++++..+... +.| +..++++.++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 346899999999999999999999999999999998765422 222 2346788999
Q ss_pred hccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHH--hcCCCceEecCcccCCcccccC
Q 001973 200 AKDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQ--FEGKDLKLVDAPVSGGVKRASM 277 (988)
Q Consensus 200 ~~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~--~~~~g~~~ldapv~g~~~~a~~ 277 (988)
+++||+|+-|+|..-+++.-++ .++-+.++++.++...|++.+-+. +++.+. ++..|.||...|-.
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf--~~l~~~~~~~aIlaSNTSsl~is~--ia~~~~~p~r~ig~HffNP~~~-------- 152 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIF--AQLDSIVDDRVVLSSSSSCLLPSK--LFTGLAHVKQCIVAHPVNPPYY-------- 152 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHH--HHHHTTCCSSSEEEECCSSCCHHH--HHTTCTTGGGEEEEEECSSTTT--------
T ss_pred hccCcEEeeccccHHHHHHHHH--HHHHHHhhhcceeehhhhhccchh--hhhhccCCCcEEEecCCCCccc--------
Confidence 9999999999999888876665 677778888888876655544432 333222 22235566654311
Q ss_pred CCeEEEEe---CCHHHHHHHHHHHHhcCCeEEEEeC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 001973 278 GELTIMAA---GTEESLKSTGSVLSALSEKLYVIKG-GCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNI 353 (988)
Q Consensus 278 g~l~~~~g---g~~~~~~~~~~ll~~~g~~v~~~~g-~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~ 353 (988)
-.++-++. .+++.++.+..+++.+|++.+++.. .+| ++.|-+ ...+++|++.+.+..+.+++++..+
T Consensus 153 m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pG------Fi~NRl---~~~~~~EA~~lv~eGvas~edID~~ 223 (319)
T 3ado_A 153 IPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDG------FVLNRL---QYAIISEAWRLVEEGIVSPSDLDLV 223 (319)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTT------TTHHHH---HHHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred cchHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCC------EeHHHH---HHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 12344444 4789999999999999998775443 344 333433 3456899999999999999999999
Q ss_pred HHhcCCCc
Q 001973 354 ITDSGGSS 361 (988)
Q Consensus 354 l~~~~~~s 361 (988)
+..+.+..
T Consensus 224 ~~~g~g~~ 231 (319)
T 3ado_A 224 MSDGLGMR 231 (319)
T ss_dssp HHTTHHHH
T ss_pred HHhCCCCC
Confidence 88765433
No 103
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.35 E-value=6.8e-12 Score=140.62 Aligned_cols=190 Identities=16% Similarity=0.159 Sum_probs=129.5
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhH-HHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc-
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPT-LTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL- 224 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~-~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~- 224 (988)
|+|+|||+|.||.++|.+|.+.|++|++|||++++ .+.+.+.|+..+ ++.++++++|+||+|+|... ...++ +
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~-~~~v~---~~ 91 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEF-QGRLY---KE 91 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHH-HHHHH---HH
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHH-HHHHH---HH
Confidence 58999999999999999999999999999999876 566667788766 88899999999999999866 46777 4
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC-cccCCccc-------ccCCCeEEEE---eCCHHHHHH
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA-PVSGGVKR-------ASMGELTIMA---AGTEESLKS 293 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda-pv~g~~~~-------a~~g~l~~~~---gg~~~~~~~ 293 (988)
++.+.++++++|+++++... .+.. +. ...+..++.. | .+|.. ...|...+++ ..+++..+.
T Consensus 92 ~i~~~l~~~~ivi~~~gv~~----~~~~-~~-~~~~~~vv~~~P--~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~ 163 (338)
T 1np3_A 92 EIEPNLKKGATLAFAHGFSI----HYNQ-VV-PRADLDVIMIAP--KAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNV 163 (338)
T ss_dssp HTGGGCCTTCEEEESCCHHH----HTTS-SC-CCTTCEEEEEEE--SSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHH
T ss_pred HHHhhCCCCCEEEEcCCchh----HHHh-hc-CCCCcEEEeccC--CCCchhHHHHHhccCCCeEEEEecCCCCHHHHHH
Confidence 67788899999999865322 1111 11 1124445433 4 23332 1224434333 346778899
Q ss_pred HHHHHHhcCC-e--EEEEeCCcchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 001973 294 TGSVLSALSE-K--LYVIKGGCGAGSGVKMANQ-LLAGVHIASAAEAMAFGARLGLNTRVL 350 (988)
Q Consensus 294 ~~~ll~~~g~-~--v~~~~g~~g~a~~~Kl~~N-~~~~~~~~~~~Ea~~la~~~Gid~~~~ 350 (988)
+..+++.+|. + ++.+ ..-.......++.+ .+.+....+++.++....+.|++++..
T Consensus 164 ~~~l~~~lG~~~agv~~~-~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 164 ALSYACGVGGGRTGIIET-TFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp HHHHHHHTTHHHHCEEEC-CHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHcCCCccceEee-chhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 9999999998 5 6653 22223334445444 333334445555555566889998754
No 104
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.33 E-value=4.2e-12 Score=139.95 Aligned_cols=120 Identities=23% Similarity=0.378 Sum_probs=113.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
+++|++.+.++.++.|++.++++.|++++.+.+++..+..+|+.+..+.+.+++++|.| |.++++.||++++.++|++.
T Consensus 176 l~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~ 255 (299)
T 1vpd_A 176 LANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGV 255 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHHHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999999999999989998887888999999988 99999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhccc
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVN 120 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~ 120 (988)
|+++|+.+.+.+.|+++.+.|+|++|++++++++++..+.+
T Consensus 256 gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~ 296 (299)
T 1vpd_A 256 GAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAKVE 296 (299)
T ss_dssp TCCCHHHHHHHHHHHHHHHTTCTTSBGGGHHHHHHHHHTCC
T ss_pred CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999877753
No 105
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.33 E-value=6.3e-12 Score=138.73 Aligned_cols=122 Identities=30% Similarity=0.540 Sum_probs=114.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhcccc-ccccCCCCc-chHHHHHHhHHHHHHHHHh
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIP-NLLRGDAKL-HFLNAFIQNLGIALDMAKT 78 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~-f~l~l~~KDl~la~~~a~~ 78 (988)
+++|.+...++.++.|++.++++.|++++.+.+++..+..+++.+..+.+ .+++++|.| |.++.+.||++++++++++
T Consensus 175 l~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~ 254 (301)
T 3cky_A 175 IVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLALEAGKE 254 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999888998888888 899999998 9999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhccccc
Q 001973 79 LAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNIT 122 (988)
Q Consensus 79 ~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~ 122 (988)
.|+++|+.+.+.+.|+++.+.|+|++|++++++++++..+.+..
T Consensus 255 ~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~ 298 (301)
T 3cky_A 255 GNVPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTGVSVS 298 (301)
T ss_dssp HTCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHHHHCCCCS
T ss_pred hCCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999999988876544
No 106
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=99.32 E-value=4.8e-11 Score=137.40 Aligned_cols=264 Identities=12% Similarity=0.059 Sum_probs=150.8
Q ss_pred CeEEEEccchHHHHHHHHHHh-CCCeEEEEe---CChhHHHHH-HhcC---------C----------cccCCHHHHhcc
Q 001973 147 TRVGFIGLGAMGFGMATHLLR-SNFTVIGYD---VYRPTLTKF-QNVG---------G----------LIANSPAEAAKD 202 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~-~G~~V~v~d---r~~~~~~~l-~~~G---------~----------~~~~s~~e~~~~ 202 (988)
|||+|||+|+||+.+|..|++ +||+|++|| |++++++.+ .+.| . ..++++++++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAISG 82 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHHTT
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHhCC
Confidence 699999999999999999998 599999999 888888874 3332 1 145688888999
Q ss_pred CcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecC-CCCHHHHHHHHHHHHhcCCCceEe---cCcccCC---cc--
Q 001973 203 VGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSS-TVSPGFVSQLERRLQFEGKDLKLV---DAPVSGG---VK-- 273 (988)
Q Consensus 203 aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~s-t~~p~~~~~l~~~l~~~~~g~~~l---dapv~g~---~~-- 273 (988)
+|+||+|||+.. .++++ +.+.+.+.++++|+..+ +.... ....+.+.+......+. ..|.... |.
T Consensus 83 aD~Vilav~~~~-~~~v~---~~l~~~l~~~~ivv~~~~~~G~~--~~~~~~l~~~~~~~v~~~~~~~~~~~~~~gpg~~ 156 (404)
T 3c7a_A 83 ADVVILTVPAFA-HEGYF---QAMAPYVQDSALIVGLPSQAGFE--FQCRDILGDKAAAVSMMSFETLPWACRIKEFGRK 156 (404)
T ss_dssp CSEEEECSCGGG-HHHHH---HHHTTTCCTTCEEEETTCCTTHH--HHHHHHHGGGGGTSEEEEESSCSEEEEEEETTTE
T ss_pred CCEEEEeCchHH-HHHHH---HHHHhhCCCCcEEEEcCCCccHH--HHHHHHHHhcCCCeEEEEecCchHhhcccCCCcE
Confidence 999999999876 67777 67888888899998853 33212 11223333211111121 2222111 21
Q ss_pred --cccCCCeEEEEe---CCHHHHHHHHHHHHhcCC-e-EEEEeCCcc--------hHHHHH------------------H
Q 001973 274 --RASMGELTIMAA---GTEESLKSTGSVLSALSE-K-LYVIKGGCG--------AGSGVK------------------M 320 (988)
Q Consensus 274 --~a~~g~l~~~~g---g~~~~~~~~~~ll~~~g~-~-v~~~~g~~g--------~a~~~K------------------l 320 (988)
....+. .+..| ++.+..+++..+|+.++. . +.+ ..++- ....+- +
T Consensus 157 v~~~~~~~-~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~di~~~~l~~N~~~~~~~~l~~~~~~~g~~~~~~~~~ 234 (404)
T 3c7a_A 157 VEVLGTKS-VLAASLIKGTAKTVDPLSTLQMLHGAEPVFRL-AKHFLEMLIMSYSFVHPAILFGRWGSWDGKPVPEAPLF 234 (404)
T ss_dssp EEEEEECS-EEEEEEECCSSCCSCHHHHHHHHHCSSSEEEE-CSCHHHHHHTTCTTHHHHHHHHHHTTCCSCCBSSCCBS
T ss_pred EEEEEECc-eEEEEEccCCcchHHHHHHHHHHhCCCCceeE-cCCEeeeeecCCceeccHHHHHHHHhhhcCCCCCCCcc
Confidence 011111 11222 111233455666666664 3 333 33331 000000 1
Q ss_pred HHH---HHHHHHHHHHHHHHHHHHHc-----CCCHH---HHHHHHHhcC------CCccc--cccc-------cccc--c
Q 001973 321 ANQ---LLAGVHIASAAEAMAFGARL-----GLNTR---VLFNIITDSG------GSSWM--FENR-------VPHM--L 372 (988)
Q Consensus 321 ~~N---~~~~~~~~~~~Ea~~la~~~-----Gid~~---~~~~~l~~~~------~~s~~--~~~~-------~~~~--~ 372 (988)
..| ....++..++.|+.+++++. |++.. .+.+.+.... ..|.. +... .| + .
T Consensus 235 ~~~~~~~~~~l~~~~~~E~~~va~a~~~~~~G~~~~~~~~~~d~~~~~~~~~~~~~~s~~~~~~~~~~~~d~~~P-~~~t 313 (404)
T 3c7a_A 235 YQGIDQATADMLTACSNECKDVANAIMAACPGNDLSDVKDIYQWYLEYYHEDIQDDHDLYHAITTNKSYKGLVHP-VKAV 313 (404)
T ss_dssp GGGCCHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCTTCCCHHHHHHHHSTTTBSCCSSHHHHHHTBGGGTTCBCC-EEEE
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCCCHHHHHHHhCCCccCChhhHHHHHHhhhhhccCCCC-CCCc
Confidence 122 45567778899999999999 98762 2223332211 11211 1110 01 0 0
Q ss_pred C----CCCCCCchhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHc
Q 001973 373 D----NDYTPYSALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAA 419 (988)
Q Consensus 373 ~----~~~~~~~~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~ 419 (988)
. .++..+...+...--+..+.++++++|+++|+++.++++++.....
T Consensus 314 e~~~~~d~~~r~~~Edv~~~~~~v~~la~~~gV~tP~~~~l~~l~~~~~~~ 364 (404)
T 3c7a_A 314 DGGVAPDFGNRYLTEDIPMGMIVFKGVAIAAGVAIPSNDKLIMWAQEKIGK 364 (404)
T ss_dssp TTEEEECCCSSTTTTTTTTTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTC
T ss_pred CCCccCCccccccccccccchHHHHHHHHHhCCCCchHHHHHHHHHHHhCc
Confidence 0 0111111111111234688999999999999999999998876654
No 107
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.27 E-value=1.2e-11 Score=135.67 Aligned_cols=120 Identities=24% Similarity=0.320 Sum_probs=112.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhcccc-ccccCCCCc-chHHHHHHhHHHHHHHHHh
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIP-NLLRGDAKL-HFLNAFIQNLGIALDMAKT 78 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~-f~l~l~~KDl~la~~~a~~ 78 (988)
+++|.+.+.++.++.|++.++++.|++++.+.+++..+.++|++++.+.+ .+++++|.| |+++.+.||++.+++++++
T Consensus 166 ~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~ 245 (289)
T 2cvz_A 166 AINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLGIAMGVLDG 245 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHHHHHHHHHHHHH
Confidence 36899999999999999999999999999999999999888888887778 899999988 9999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhccc
Q 001973 79 LAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVN 120 (988)
Q Consensus 79 ~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~ 120 (988)
.|+++|+.+.+.+.|+++.+.|+|++|++++++++++..+.+
T Consensus 246 ~gv~~p~~~~v~~~~~~a~~~g~~~~d~~~~~~~~~~~~~~~ 287 (289)
T 2cvz_A 246 EKAPSPLLRLAREVYEMAKRELGPDADHVEALRLLERWGGVE 287 (289)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHCTTSBGGGGHHHHHHHHTSC
T ss_pred cCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999998877654
No 108
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.27 E-value=1.5e-11 Score=135.25 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=112.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
+++|++.+.++.++.|++.++++.|++++.+.+++..+..+|+++..+.+.+++++|.| |.++.+.||++++++++++.
T Consensus 173 l~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~kd~~~~~~~a~~~ 252 (295)
T 1yb4_A 173 VANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQKDLNLALQSAKAL 252 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHHHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999999999888988887778899999999 99999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhccc
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVN 120 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~ 120 (988)
|+++|+.+.+.+.|+++.+.|+|++|++++++++++..+.+
T Consensus 253 g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~ 293 (295)
T 1yb4_A 253 ALNLPNTATCQELFNTCAANGGSQLDHSAMVQALELMANHK 293 (295)
T ss_dssp TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHHHHTCC
T ss_pred CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999998877654
No 109
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.27 E-value=1.1e-11 Score=136.59 Aligned_cols=101 Identities=21% Similarity=0.261 Sum_probs=93.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHH------HHHHhhccCCchhhhccccccccCCCCc-chH-----HHHHHh
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVL------YDIISNAAGNSWIFKNYIPNLLRGDAKL-HFL-----NAFIQN 68 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~------~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l-----~l~~KD 68 (988)
++||++.+.++.+++|++.++++.|+|++.+ +++++.++++||..+ .++++++ |.| |.+ +++.||
T Consensus 182 l~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~-~~~~f~~~~~~~~~~~KD 258 (296)
T 3qha_A 182 LARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD--NMKDLEP-DNFLYQPFLHTRGLGEKD 258 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS--SCSCCCT-TSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh--chhhhhc-CCCCCchhhhhhHHHHHH
Confidence 5799999999999999999999999999999 999999999997554 8899988 988 998 999999
Q ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCcCCCC
Q 001973 69 LGIALDMAKTLAFPLPLLAVAHQQLILGLSHAHAND 104 (988)
Q Consensus 69 l~la~~~a~~~g~~~p~~~~~~~~~~~a~~~G~g~~ 104 (988)
+++++++|++.|+++|+.+.+.+.|+++.+.||+++
T Consensus 259 ~~~~~~~a~~~g~~~p~~~~~~~~~~~~~~~g~~~~ 294 (296)
T 3qha_A 259 LSLALALGEAVSVDLPLARLAYEGLAAGLGVPHKEK 294 (296)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHTCCC---
T ss_pred HHHHHHHHHHcCCCChHHHHHHHHHHHHHhcCcccc
Confidence 999999999999999999999999999999999654
No 110
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=99.25 E-value=3.9e-12 Score=139.28 Aligned_cols=58 Identities=24% Similarity=0.293 Sum_probs=55.1
Q ss_pred cccccH---HHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhcccC
Q 001973 919 VRISST---KELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQY 976 (988)
Q Consensus 919 ~~lv~~---~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~~ 976 (988)
|++++. ++||++|++++|||||||++|+|+++|+++|||+++||||||++++..+|++
T Consensus 1 Mp~~~~~~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~ 61 (349)
T 3elf_A 1 MPIATPEVYAEMLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGS 61 (349)
T ss_dssp -CBCCHHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHH
T ss_pred CceecHHHHHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcC
Confidence 789999 9999999999999999999999999999999999999999999999999864
No 111
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.25 E-value=2.6e-11 Score=133.47 Aligned_cols=115 Identities=23% Similarity=0.395 Sum_probs=104.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhcccc-------ccccCCCCc-chHHHHHHhHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIP-------NLLRGDAKL-HFLNAFIQNLGIA 72 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~~-f~l~l~~KDl~la 72 (988)
++||++.+.++..+.|++.++++.|++++.+.+++..+.+.||++..+.+ .+..++|.+ |.++++.||++++
T Consensus 171 l~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~~~~~~~kd~~~~ 250 (296)
T 2gf2_A 171 ICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLA 250 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSSBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCCchHHHHHHHHHH
Confidence 46899989999999999999999999999999999998888888765432 245678888 9999999999999
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHh
Q 001973 73 LDMAKTLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWEN 115 (988)
Q Consensus 73 ~~~a~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~ 115 (988)
.++|++.|+++|+.+.+.+.|+++.++|+|++|++++++++++
T Consensus 251 ~~~a~~~gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~ 293 (296)
T 2gf2_A 251 QDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLRE 293 (296)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHHHHTTTCTTSBGGGHHHHHSC
T ss_pred HHHHHHcCCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998764
No 112
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=99.23 E-value=5.4e-12 Score=135.10 Aligned_cols=64 Identities=31% Similarity=0.418 Sum_probs=58.2
Q ss_pred cccHHHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhcccCHHHHHhhh
Q 001973 921 ISSTKELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQYITLVTSSI 984 (988)
Q Consensus 921 lv~~~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~~~~~~~~~~ 984 (988)
--.+++||++|++++|||||||++|+|+++|+++|||+++||||||++++..+|.|..++.+++
T Consensus 12 ~n~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~ 75 (306)
T 3pm6_A 12 SNRALPLLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAA 75 (306)
T ss_dssp TCSSHHHHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHH
T ss_pred ccHHHHHHHHHHHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHH
Confidence 3467999999999999999999999999999999999999999999999999999876665543
No 113
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=99.18 E-value=6.6e-13 Score=147.15 Aligned_cols=139 Identities=21% Similarity=0.295 Sum_probs=107.7
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhC-CC-eEEEEeCChhHHHHHHhc-C--CcccCCHHHHhccCcEEEEEcCChHHHHH
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRS-NF-TVIGYDVYRPTLTKFQNV-G--GLIANSPAEAAKDVGVLVIMVTNEAQAES 218 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~-G~-~V~v~dr~~~~~~~l~~~-G--~~~~~s~~e~~~~aDvV~l~vp~~~~~~~ 218 (988)
...++|+|||+|.||..++.+|.+. |+ +|++|||++++.+++.+. + +..+++++++++++|+|++|+|.. +.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~---~~ 209 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT---EP 209 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS---SC
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC---Cc
Confidence 3457999999999999999999886 76 899999999999998875 5 677889999999999999999963 33
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec----Ccc-cCCc---ccccCCCeEEEEeCCHHH
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD----APV-SGGV---KRASMGELTIMAAGTEES 290 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld----apv-~g~~---~~a~~g~l~~~~gg~~~~ 290 (988)
++. . +.+++|++|+++++..|.. +++.+.+.+ ++..|+| +|+ .|.. ..+..+++..+++|+.+.
T Consensus 210 v~~---~--~~l~~g~~vi~~g~~~p~~-~el~~~~~~--~g~~~vD~~~~a~~~~G~~~~~~~~~~g~L~~~v~G~~~~ 281 (312)
T 2i99_A 210 ILF---G--EWVKPGAHINAVGASRPDW-RELDDELMK--EAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPA 281 (312)
T ss_dssp CBC---G--GGSCTTCEEEECCCCSTTC-CSBCHHHHH--HSEEEESCHHHHHHHCHHHHTTTCCCCEEHHHHHHTSSCC
T ss_pred ccC---H--HHcCCCcEEEeCCCCCCCc-eeccHHHHh--cCEEEECCHHHHHhhcCCcccChhhccccHHHHhCCCCCC
Confidence 331 1 5688999999999999875 667666665 4678999 566 4443 334456677788887653
Q ss_pred HHH
Q 001973 291 LKS 293 (988)
Q Consensus 291 ~~~ 293 (988)
++.
T Consensus 282 ~~~ 284 (312)
T 2i99_A 282 HCE 284 (312)
T ss_dssp CTT
T ss_pred CCC
Confidence 333
No 114
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.16 E-value=4.8e-11 Score=132.63 Aligned_cols=114 Identities=18% Similarity=0.346 Sum_probs=107.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
+++|.+.+.++..+.|++.++++.|++++.+.+++..+..+|+++..+.+.+++++|.| |+++.+.||++++++++++.
T Consensus 201 ~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~kd~~~~~~~a~~~ 280 (316)
T 2uyy_A 201 LIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAV 280 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999998887788899999999 99999999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHH
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWE 114 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~ 114 (988)
|+++|+.+.+.+.|+++.+.|+|++|+++++++++
T Consensus 281 gv~~p~~~~v~~~~~~a~~~g~g~~d~~~~~~~~~ 315 (316)
T 2uyy_A 281 NHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYI 315 (316)
T ss_dssp TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGTC
T ss_pred CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHh
Confidence 99999999999999999999999999999987653
No 115
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.15 E-value=1.5e-11 Score=133.69 Aligned_cols=105 Identities=14% Similarity=0.181 Sum_probs=91.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||+++..+. ....+++++++++||+|++++|.+.+++.++. ++
T Consensus 122 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~--~~ 194 (290)
T 3gvx_A 122 GKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----DVISESPADLFRQSDFVLIAIPLTDKTRGMVN--SR 194 (290)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----SEECSSHHHHHHHCSEEEECCCCCTTTTTCBS--HH
T ss_pred cchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----ccccCChHHHhhccCeEEEEeeccccchhhhh--HH
Confidence 369999999999999999999999999999999765432 44567999999999999999998777777663 45
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
.++.+++|.++||++++.+.....+.+.+.+.
T Consensus 195 ~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 226 (290)
T 3gvx_A 195 LLANARKNLTIVNVARADVVSKPDMIGFLKER 226 (290)
T ss_dssp HHTTCCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred HHhhhhcCceEEEeehhcccCCcchhhhhhhc
Confidence 67889999999999999999999999999873
No 116
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=99.11 E-value=2.6e-11 Score=133.45 Aligned_cols=53 Identities=19% Similarity=0.333 Sum_probs=51.3
Q ss_pred cHHHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhccc
Q 001973 923 STKELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQ 975 (988)
Q Consensus 923 ~~~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~ 975 (988)
++++||++|++++||||||||+|+|+++|+++|||+++||||||+++++.+|+
T Consensus 16 ~~~~ll~~A~~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~ 68 (358)
T 1dos_A 16 DVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFSNGGASFI 68 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhHHHHh
Confidence 68999999999999999999999999999999999999999999999988876
No 117
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=99.11 E-value=8.8e-11 Score=130.48 Aligned_cols=105 Identities=20% Similarity=0.256 Sum_probs=71.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||+++. ..+.....++.+++++||+|++++|...+++.++. ++
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~-----~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~--~~ 243 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS-----GVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVD--AS 243 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT-----TSCCEECSSHHHHHHTCSEEEECC----------C--HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc-----ccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhh--HH
Confidence 469999999999999999999999999999999765 23556678999999999999999998888888874 46
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
.++.++++.++||++++.+.....+.+.+.+.
T Consensus 244 ~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 275 (340)
T 4dgs_A 244 LLQALGPEGIVVNVARGNVVDEDALIEALKSG 275 (340)
T ss_dssp HHHHTTTTCEEEECSCC--------------C
T ss_pred HHhcCCCCCEEEECCCCcccCHHHHHHHHHcC
Confidence 77889999999999999999999999988763
No 118
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.09 E-value=1.3e-09 Score=125.82 Aligned_cols=197 Identities=17% Similarity=0.097 Sum_probs=145.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
+++|++.+++++.+.|...++++.|+|++.++++++.++.-++ ..+ .+.| |....+.||+.++++.|++.
T Consensus 217 l~~N~~~a~~ia~~nE~~~l~~~~GiD~~~v~~~~~~~~rig~-------~~l--~pg~G~gg~c~~KD~~~l~~~A~~~ 287 (446)
T 4a7p_A 217 YAANAFLAVKITFINEIADLCEQVGADVQEVSRGIGMDNRIGG-------KFL--HAGPGYGGSCFPKDTLALMKTAADN 287 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTC----------CC--CCCSCCCTTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCCC-------ccC--CCCCCcchhhHHHHHHHHHHHHHhc
Confidence 4799999999999999999999999999999999987642111 111 1223 77889999999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccc----
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLG---- 155 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G---- 155 (988)
|+++|+.+++.+..+..... +++.+.+..+.. .+..||+|+|+-
T Consensus 288 g~~~~l~~~~~~iN~~~~~~---------~~~~i~~~l~~~-----------------------~~~~~v~vlGlafK~~ 335 (446)
T 4a7p_A 288 ETPLRIVEATVQVNDARKRA---------MGRKVIKAMGGD-----------------------VRGKTVGILGLTFKPN 335 (446)
T ss_dssp TCCCHHHHHHHHHHHHHHHH---------HHHHHHHHTTSC-----------------------CTTCEEEEECCSSSTT
T ss_pred CCCCHHHHHHHHHHHHHHHH---------HHHHHHHHhccc-----------------------CCCCEEEEEEEEeCCC
Confidence 99999999999998865432 343333322210 012489999987
Q ss_pred ------hHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh--cCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccchh
Q 001973 156 ------AMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN--VGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGAV 227 (988)
Q Consensus 156 ------~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~--~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i~ 227 (988)
.-...++..|.+.|.+|.+||.... +...+ .++..++++.++++++|.+++++..+. .+..- .+.+.
T Consensus 336 ~dD~ReSp~~~i~~~L~~~g~~v~~~DP~~~--~~~~~~~~~~~~~~~~~~~~~~ad~vvi~t~~~~-f~~~d--~~~~~ 410 (446)
T 4a7p_A 336 TDDMRDAPSLSIIAALQDAGATVKAYDPEGV--EQASKMLTDVEFVENPYAAADGADALVIVTEWDA-FRALD--LTRIK 410 (446)
T ss_dssp SCCCTTCSHHHHHHHHHHTSCEEEEECSSCH--HHHGGGCSSCCBCSCHHHHHTTBSEEEECSCCTT-TTSCC--HHHHH
T ss_pred CcccccChHHHHHHHHHHCCCEEEEECCCCC--HhHHHhcCCceEecChhHHhcCCCEEEEeeCCHH-hhcCC--HHHHH
Confidence 5678999999999999999998753 22222 267778899999999999999998765 22110 01222
Q ss_pred hhCCCCCEEEecCCCCH
Q 001973 228 SALSSGASIILSSTVSP 244 (988)
Q Consensus 228 ~~l~~g~ivId~st~~p 244 (988)
..+ ++.+|+|.-+...
T Consensus 411 ~~~-~~~~i~D~r~~~~ 426 (446)
T 4a7p_A 411 NSL-KSPVLVDLRNIYP 426 (446)
T ss_dssp TTB-SSCBEECSSCCSC
T ss_pred Hhc-CCCEEEECCCCCC
Confidence 333 3568999887754
No 119
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=99.08 E-value=3.9e-11 Score=132.00 Aligned_cols=53 Identities=26% Similarity=0.341 Sum_probs=51.2
Q ss_pred cHHHHHHHHHHCCceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhccc
Q 001973 923 STKELLLNAEKGEYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQ 975 (988)
Q Consensus 923 ~~~~ll~~A~~~~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~ 975 (988)
.|++||++|++++|||||||++|+|+++|+++|||+++||||||+++++.+|+
T Consensus 19 ~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~ 71 (357)
T 3qm3_A 19 ELNKIYDYAKAEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFSNGGAKFY 71 (357)
T ss_dssp GHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHHTSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhc
Confidence 68999999999999999999999999999999999999999999999988874
No 120
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.08 E-value=2.1e-09 Score=124.71 Aligned_cols=197 Identities=12% Similarity=-0.006 Sum_probs=145.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc---chHHHHHHhHHHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL---HFLNAFIQNLGIALDMAK 77 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~---f~l~l~~KDl~la~~~a~ 77 (988)
+++|++.+++++.+.|...++++.|+|++.+.++++.++ ++....|.| |....+.||++++++.|+
T Consensus 213 l~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-----------rig~~~~~pg~G~gg~c~~KD~~~l~~~a~ 281 (450)
T 3gg2_A 213 YAANAMLATRISFMNDVANLCERVGADVSMVRLGIGSDS-----------RIGSKFLYPGCGYGGSCFPKDVKALIRTAE 281 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTST-----------TTCSSSCCCSSCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHcCCC-----------CCCcccCCCCCCCCcccHHhhHHHHHHHHH
Confidence 479999999999999999999999999999999998763 233344454 668899999999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccch-
Q 001973 78 TLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLGA- 156 (988)
Q Consensus 78 ~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G~- 156 (988)
+.|+++|+.+++++..+.... -+++.+.+..+.. .+..||+|+|+-.
T Consensus 282 ~~g~~~~l~~~~~~iN~~~~~---------~~~~~~~~~~~~~-----------------------~~~~~v~vlGlafK 329 (450)
T 3gg2_A 282 DNGYRMEVLEAVERVNEKQKS---------ILFDKFSTYYKGN-----------------------VQGRCVAIWGLSFK 329 (450)
T ss_dssp HTTCCCHHHHHHHHHHHHHTT---------HHHHHHHHHTTTC-----------------------CTTCEEEEECCSSS
T ss_pred HcCCCcHHHHHHHHHHHHHHH---------HHHHHHHHHhccc-----------------------CCCCEEEEEeeeeC
Confidence 999999999999999885443 2444443322210 0124899998853
Q ss_pred ---------HHHHHHHHHHhCCCeEEEEeCChhH-HHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 157 ---------MGFGMATHLLRSNFTVIGYDVYRPT-LTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 157 ---------mG~~lA~~L~~~G~~V~v~dr~~~~-~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
=...++..|.+.|.+|.+||..... ....-...+..++++.++++++|.+++++..+. .+..- .+.+
T Consensus 330 ~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~~~~-f~~~~--~~~~ 406 (450)
T 3gg2_A 330 PGTDDMREAPSLVLIEKLLEVGCRVRVYDPVAMKEAQKRLGDKVEYTTDMYDAVRGAEALFHVTEWKE-FRMPD--WSAL 406 (450)
T ss_dssp TTCCCCTTCHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGSEECSSHHHHTTTCSCEEECSCCGG-GSSCC--HHHH
T ss_pred CCCcccccChHHHHHHHHHHCCCEEEEECCCCcHHHHHhcCccceecCCHHHHhcCCCEEEEccCCHH-HhhcC--HHHH
Confidence 4688999999999999999987532 222211236678899999999999999998865 22110 0123
Q ss_pred hhhCCCCCEEEecCCCCH
Q 001973 227 VSALSSGASIILSSTVSP 244 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p 244 (988)
...+ ++.+|+|.-+...
T Consensus 407 ~~~~-~~~~i~D~r~~~~ 423 (450)
T 3gg2_A 407 SQAM-AASLVIDGRNVYE 423 (450)
T ss_dssp HHHS-SSCEEEESSCCCC
T ss_pred HHhc-CCCEEEECCCCCC
Confidence 3333 3578999887653
No 121
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=99.08 E-value=1.6e-11 Score=130.48 Aligned_cols=160 Identities=19% Similarity=0.203 Sum_probs=113.3
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeE-EEEeCChhHHHHHHhcCCcccCCHHHHh-ccCcEEEEEcCChHHHHHHHcccc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTV-IGYDVYRPTLTKFQNVGGLIANSPAEAA-KDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~G~~~~~s~~e~~-~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
|||||||+|.||..++.+|.+.|++| .+||+++ +.+. .++++++++ .++|+|++|+|+....+.+.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~~-------~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~---- 68 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERNGFEIAAILDVRG-EHEK-------MVRGIDEFLQREMDVAVEAASQQAVKDYAE---- 68 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSC-CCTT-------EESSHHHHTTSCCSEEEECSCHHHHHHHHH----
T ss_pred CEEEEECCCHHHHHHHHHHhcCCCEEEEEEecCc-chhh-------hcCCHHHHhcCCCCEEEECCCHHHHHHHHH----
Confidence 48999999999999999999999997 7999985 2211 578899988 69999999999875444432
Q ss_pred chhhhCCCCCEEEecCCCCHH---HHHHHHHHHHhcCCCce-EecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHh
Q 001973 225 GAVSALSSGASIILSSTVSPG---FVSQLERRLQFEGKDLK-LVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSA 300 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~---~~~~l~~~l~~~~~g~~-~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~ 300 (988)
..+..|+.+++.++..+. ..+++.+...+. |.. +++++++++...+..+.+ +++...+...++.++.
T Consensus 69 ---~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~--g~~~~i~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~ 139 (236)
T 2dc1_A 69 ---KILKAGIDLIVLSTGAFADRDFLSRVREVCRKT--GRRVYIASGAIGGLDAIFSASE----LIEEIVLTTRKNWRQF 139 (236)
T ss_dssp ---HHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHH--CCCEEECCTTCSCHHHHHHTGG----GEEEEEEEEEEEGGGT
T ss_pred ---HHHHCCCcEEEECcccCChHHHHHHHHHHHHhc--CCeEEecCccccChHHHHHhhc----cccEEEEEEEcChHHc
Confidence 345678999999887643 236777776653 455 689999999877666654 3333333333344666
Q ss_pred cCCeEEEEeCCcchH-HHHHHHHHHHHHH
Q 001973 301 LSEKLYVIKGGCGAG-SGVKMANQLLAGV 328 (988)
Q Consensus 301 ~g~~v~~~~g~~g~a-~~~Kl~~N~~~~~ 328 (988)
.+.++++ .|+.+.+ ..+|...|+....
T Consensus 140 ~~~~~~~-~G~~~~~~~~~~~~~n~~~~~ 167 (236)
T 2dc1_A 140 GRKGVIF-EGSASEAAQKFPKNLNVAATL 167 (236)
T ss_dssp TSCEEEE-EEEHHHHHHHSTTCCHHHHHH
T ss_pred CcceEEE-eccHHHHHHHCCchHHHHHHH
Confidence 7777777 4665443 4667777766543
No 122
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.07 E-value=1.2e-10 Score=130.28 Aligned_cols=117 Identities=14% Similarity=0.131 Sum_probs=98.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||++. .+...+.|+..++++++++++||+|++++|...+++.++. ++
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~--~~ 236 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIIT--VA 236 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBC--HH
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhC--HH
Confidence 46999999999999999999999999999999864 3556667888888999999999999999998877777663 45
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD 265 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld 265 (988)
.++.+++|.++||++++.+.....+.+.+.+.......+|
T Consensus 237 ~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lD 276 (352)
T 3gg9_A 237 DLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAID 276 (352)
T ss_dssp HHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEEC
T ss_pred HHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEec
Confidence 6788999999999999999888999999987432333444
No 123
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=99.07 E-value=3.3e-10 Score=126.34 Aligned_cols=108 Identities=19% Similarity=0.171 Sum_probs=93.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|+.|...|++|++|||++++.+.+.+.|+..+ ++.+++++||+|++++|.+..++.++. ++
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~--~~ 231 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPATEGLCN--KD 231 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBS--HH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhC--HH
Confidence 469999999999999999999999999999999877776766677766 899999999999999998876666653 35
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
+.+.++++.++|++|++.+.....+.+.+.+
T Consensus 232 ~~~~mk~gailIn~srg~~v~~~aL~~aL~~ 262 (330)
T 2gcg_A 232 FFQKMKETAVFINISRGDVVNQDDLYQALAS 262 (330)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCcccCHHHHHHHHHc
Confidence 6678899999999999998888888888876
No 124
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=99.06 E-value=1.7e-10 Score=128.79 Aligned_cols=109 Identities=13% Similarity=0.113 Sum_probs=97.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||++...+.+.+.|+...+++++++++||+|++++|....++.++. .+
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~--~~ 241 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFN--KE 241 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBS--HH
T ss_pred CCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhc--HH
Confidence 4699999999999999999999999999999998776677777888888999999999999999998776777663 46
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
.++.+++|.++||++.+.+.....+.+.+.+
T Consensus 242 ~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 272 (351)
T 3jtm_A 242 LIGKLKKGVLIVNNARGAIMERQAVVDAVES 272 (351)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHhcCCCCCEEEECcCchhhCHHHHHHHHHh
Confidence 6788999999999999999999999999987
No 125
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.06 E-value=1.2e-10 Score=129.44 Aligned_cols=111 Identities=15% Similarity=0.187 Sum_probs=98.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhcc-CCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHh
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAA-GNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKT 78 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~ 78 (988)
|+||++.++++++++|++.+++++|+|++ +++.+..++ +.+| ..+.+++++++|.+ |. +.||++++.++|++
T Consensus 196 l~~N~~~~~~~~~~~E~~~la~~~Gid~~-~~~~l~~~~~~~~~--~~~~~~~~~~~~~~g~~---~~KDl~~~~~~a~~ 269 (317)
T 4ezb_A 196 MIRSVMIKGVEALLIEALSSAERAGVTER-ILDSVQETFPGLDW--RDVADYYLSRTFEHGAR---RVTEMTEAAETIES 269 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHSTTSCH--HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHhcCccccH--HHhhhhhhcCCCCCCcc---hHHHHHHHHHHHHH
Confidence 58999999999999999999999999995 677777665 4455 66788999999998 87 49999999999999
Q ss_pred cCCCCcHHHHHHHH----HHHHhhCcCC-CCCchhHHHHHHhhh
Q 001973 79 LAFPLPLLAVAHQQ----LILGLSHAHA-NDDNPPLVKVWENVL 117 (988)
Q Consensus 79 ~g~~~p~~~~~~~~----~~~a~~~G~g-~~D~~~~~~~~~~~~ 117 (988)
.|+++|+++.+.+. |+++.+.|++ ++||+++++.+..+.
T Consensus 270 ~g~~~pl~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~ 313 (317)
T 4ezb_A 270 FGLNAPMSRAACETIAAAHAAMKDQGLSVNDGYRGFVPVLARRL 313 (317)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHTTSSCCTTSHHHHHHHHHHHHC
T ss_pred cCCCChHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhhc
Confidence 99999999999999 8888899997 999999999887543
No 126
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=99.05 E-value=4.4e-11 Score=131.97 Aligned_cols=117 Identities=12% Similarity=0.100 Sum_probs=93.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||++...+.+. +.....++++++++||+|++++|...+++.++. .+
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~--~~ 215 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGFD--QVYQLPALNKMLAQADVIVSVLPATRETHHLFT--AS 215 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTCS--EEECGGGHHHHHHTCSEEEECCCCCSSSTTSBC--TT
T ss_pred cceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhhh--cccccCCHHHHHhhCCEEEEeCCCCHHHHHHhH--HH
Confidence 36999999999999999999999999999999875432211 112356899999999999999998777777764 45
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
.+..+++|.++||++++.+.....+.+.+.+.......+|.
T Consensus 216 ~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV 256 (324)
T 3hg7_A 216 RFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDV 256 (324)
T ss_dssp TTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESC
T ss_pred HHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEecc
Confidence 67789999999999999999999999999874323344553
No 127
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=99.05 E-value=1.3e-10 Score=129.20 Aligned_cols=105 Identities=23% Similarity=0.248 Sum_probs=91.4
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
++|||||+|.||..+|++|...|++|++|||+++.... +.|.... ++++++++||+|++++|...+++.++. ++.
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~~li~--~~~ 216 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK--EKGCVYT-SLDELLKESDVISLHVPYTKETHHMIN--EER 216 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH--HTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBC--HHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH--hcCceec-CHHHHHhhCCEEEEeCCCChHHHHhhC--HHH
Confidence 59999999999999999999999999999999876532 4576655 499999999999999998777777663 466
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
++.+++|.++||++++.+.....+.+.+.+
T Consensus 217 l~~mk~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 217 ISLMKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 788999999999999999999999999976
No 128
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=99.05 E-value=1.3e-10 Score=129.45 Aligned_cols=107 Identities=16% Similarity=0.170 Sum_probs=93.0
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|.+|||++...+... |...++++++++++||+|++++|...+++.++. ++
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~--g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~--~~ 248 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALEE--GAIYHDTLDSLLGASDIFLIAAPGRPELKGFLD--HD 248 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHT--TCEECSSHHHHHHTCSEEEECSCCCGGGTTCBC--HH
T ss_pred CCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhhc--CCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhC--HH
Confidence 46999999999999999999999999999999875543322 777778999999999999999998777777663 46
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
.++.+++|.++||++.+.......+.+.+.+
T Consensus 249 ~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 279 (345)
T 4g2n_A 249 RIAKIPEGAVVINISRGDLINDDALIEALRS 279 (345)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCchhCHHHHHHHHHh
Confidence 6788999999999999999989999999977
No 129
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=99.04 E-value=9.8e-11 Score=130.19 Aligned_cols=105 Identities=18% Similarity=0.172 Sum_probs=90.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|+.|...|++|++|||+++.. .|....+++.+++++||+|++++|....++.++. ++
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~-----~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~--~~ 236 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPN-----TNYTYYGSVVELASNSDILVVACPLTPETTHIIN--RE 236 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTT-----CCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBC--HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhc-----cCceecCCHHHHHhcCCEEEEecCCChHHHHHhh--HH
Confidence 3689999999999999999999999999999998753 2666677899999999999999998776777663 34
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
..+.++++.++|++|++.+.....+.+.+.+.
T Consensus 237 ~l~~mk~gailIn~srG~~vd~~aL~~aL~~g 268 (333)
T 3ba1_A 237 VIDALGPKGVLINIGRGPHVDEPELVSALVEG 268 (333)
T ss_dssp HHHHHCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHhcCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 66778899999999999998888999988773
No 130
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=99.04 E-value=3.1e-10 Score=126.81 Aligned_cols=109 Identities=17% Similarity=0.146 Sum_probs=93.0
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..++|||||+|.||..+|++|...|++|++||++++.. .....|+..+.++.+++++||+|++++|...+++.++. +
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~ 243 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLIN--D 243 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBS--H
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhH--H
Confidence 34699999999999999999999999999999987642 22345777777899999999999999998877777663 3
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
+.++.++++.++||++++.+...+.+.+.+.+
T Consensus 244 ~~l~~mk~gailIN~arg~~vd~~aL~~aL~~ 275 (347)
T 1mx3_A 244 FTVKQMRQGAFLVNTARGGLVDEKALAQALKE 275 (347)
T ss_dssp HHHTTSCTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECCCChHHhHHHHHHHHHh
Confidence 56678899999999999999999999999987
No 131
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=99.03 E-value=1.2e-10 Score=129.38 Aligned_cols=109 Identities=17% Similarity=0.155 Sum_probs=93.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||++.+.+.....|+... ++.+++++||+|++++|....++.++. ++
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~ell~~aDvV~l~~P~t~~t~~li~--~~ 221 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLGLRQV-ACSELFASSDFILLALPLNADTLHLVN--AE 221 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcCceeC-CHHHHHhhCCEEEEcCCCCHHHHHHhC--HH
Confidence 469999999999999999999999999999999855555555676554 899999999999999998777776663 46
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
.++.+++|.++||++++.+.....+.+.+.+.
T Consensus 222 ~l~~mk~gailIN~arg~~vd~~aL~~aL~~g 253 (330)
T 4e5n_A 222 LLALVRPGALLVNPCRGSVVDEAAVLAALERG 253 (330)
T ss_dssp HHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHhhCCCCcEEEECCCCchhCHHHHHHHHHhC
Confidence 77889999999999999999999999999873
No 132
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=99.03 E-value=7.4e-11 Score=130.46 Aligned_cols=108 Identities=13% Similarity=0.125 Sum_probs=90.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||+++..+.+.. .....++.+++++||+|++++|...+++.++. ++
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~--~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~--~~ 212 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHFHE--TVAFTATADALATANFIVNALPLTPTTHHLFS--TE 212 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE--EEEGGGCHHHHHHCSEEEECCCCCGGGTTCBS--HH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh--ccccCCHHHHHhhCCEEEEcCCCchHHHHhcC--HH
Confidence 369999999999999999999999999999998765432211 12346789999999999999998877777764 46
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
.+..+++|.++||++++.+.....+.+.+.+.
T Consensus 213 ~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g 244 (324)
T 3evt_A 213 LFQQTKQQPMLINIGRGPAVDTTALMTALDHH 244 (324)
T ss_dssp HHHTCCSCCEEEECSCGGGBCHHHHHHHHHTT
T ss_pred HHhcCCCCCEEEEcCCChhhhHHHHHHHHHhC
Confidence 67889999999999999999999999999763
No 133
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.02 E-value=5.5e-10 Score=123.03 Aligned_cols=108 Identities=19% Similarity=0.232 Sum_probs=92.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++||+++++ +...+.|+... ++.+++++||+|++++|...+++.++. ++
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~ell~~aDvV~l~~p~~~~t~~li~--~~ 217 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAKEVNGKFV-DLETLLKESDVVTIHVPLVESTYHLIN--EE 217 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHTTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HH
T ss_pred CceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHhhcCcccc-CHHHHHhhCCEEEEecCCChHHhhhcC--HH
Confidence 469999999999999999999999999999999877 45566677654 899999999999999998776776653 35
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
..+.+++|.++||++++.+.....+.+.+.+.
T Consensus 218 ~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g 249 (307)
T 1wwk_A 218 RLKLMKKTAILINTSRGPVVDTNALVKALKEG 249 (307)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHhcCCCCeEEEECCCCcccCHHHHHHHHHhC
Confidence 67789999999999999888888888888763
No 134
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.01 E-value=1.7e-10 Score=127.41 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=91.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++||+++++. ...+.|+.. .++.++++++|+|++++|...+++.++. +.
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~--~~ 217 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KAEKINAKA-VSLEELLKNSDVISLHVTVSKDAKPIID--YP 217 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTSCCSBC--HH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HHHhcCcee-cCHHHHHhhCCEEEEeccCChHHHHhhC--HH
Confidence 3699999999999999999999999999999998774 355667765 4899999999999999998776666553 34
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
..+.+++|.++||++++.+.....+.+.+.+
T Consensus 218 ~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 218 QFELMKDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp HHHHSCTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred HHhcCCCCCEEEECCCCcccCHHHHHHHHHc
Confidence 5678899999999999988888889998876
No 135
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=99.01 E-value=3.4e-10 Score=126.91 Aligned_cols=109 Identities=17% Similarity=0.176 Sum_probs=94.7
Q ss_pred CCeEEEEccchHHHHHHHHHH-hCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLL-RSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~-~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.++|||||+|.||..+|+.|. ..|++|++|||++++.+...+.|+..++++.+++++||+|++++|...+++.++. .
T Consensus 163 g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~--~ 240 (348)
T 2w2k_A 163 GHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLID--E 240 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBC--H
T ss_pred CCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhh--H
Confidence 469999999999999999999 9999999999998776666666887777899999999999999999877777663 3
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
+..+.++++.++||++++.+.....+.+.+.+
T Consensus 241 ~~l~~mk~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 241 AFFAAMKPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHhcCCCCCEEEECCCCchhCHHHHHHHHHh
Confidence 46678899999999999998888889888876
No 136
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.00 E-value=2.5e-10 Score=126.59 Aligned_cols=108 Identities=10% Similarity=0.123 Sum_probs=91.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeC-ChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDV-YRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr-~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.++|||||+|.||..+|++|...|++|++||+ +++. ....+.|+...+++.+++++||+|++++|...+++.++. +
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~--~ 222 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASS-SDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFN--K 222 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBS--H
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcC--H
Confidence 46999999999999999999999999999999 8776 344556887777899999999999999998776666653 3
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
...+.++++.++||++++.+.....+.+.+.+
T Consensus 223 ~~l~~mk~gailIn~arg~~vd~~aL~~aL~~ 254 (320)
T 1gdh_A 223 ATIKSLPQGAIVVNTARGDLVDNELVVAALEA 254 (320)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 46678899999999999888777888888876
No 137
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=99.00 E-value=5e-10 Score=125.02 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=92.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|+.|...|++|++|||++++ +...+.|+.. .++.+++++||+|++++|.+..++.++. ++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~--~~ 225 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELNAEF-KPLEDLLRESDFVVLAVPLTRETYHLIN--EE 225 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHCCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBC--HH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcCccc-CCHHHHHhhCCEEEECCCCChHHHHhhC--HH
Confidence 469999999999999999999999999999999887 5555567765 5899999999999999999887766663 35
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
+.+.++++.++|++|++.+.....+.+.+.+
T Consensus 226 ~~~~mk~~ailIn~srg~~v~~~aL~~aL~~ 256 (334)
T 2dbq_A 226 RLKLMKKTAILINIARGKVVDTNALVKALKE 256 (334)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 6778899999999999998888888888876
No 138
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.00 E-value=3.5e-10 Score=125.73 Aligned_cols=107 Identities=18% Similarity=0.154 Sum_probs=92.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++||++++. +.....|+.. .++++++++||+|++++|...+++.++. ++
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~--~~ 240 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISP-EVSASFGVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLN--DN 240 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCH-HHHHHTTCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBC--HH
T ss_pred cCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCcee-CCHHHHHhcCCEEEEecCCCHHHHHhhC--HH
Confidence 469999999999999999999999999999998776 3455667764 4899999999999999999887777763 35
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
.++.++++.++||++++.+.....+.+.+.+
T Consensus 241 ~l~~mk~gailIN~arg~vvd~~aL~~aL~~ 271 (335)
T 2g76_A 241 TFAQCKKGVRVVNCARGGIVDEGALLRALQS 271 (335)
T ss_dssp HHTTSCTTEEEEECSCTTSBCHHHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCccccCHHHHHHHHHh
Confidence 6788999999999999988888888888876
No 139
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.98 E-value=3.9e-09 Score=119.68 Aligned_cols=202 Identities=13% Similarity=0.101 Sum_probs=126.5
Q ss_pred CeEEEEccchHHHHHHHHHHhC------CCeEEEEeCCh-hHHHHHHhcCCcc----cCCHHHHhccCcEEEEEcCChHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRS------NFTVIGYDVYR-PTLTKFQNVGGLI----ANSPAEAAKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~------G~~V~v~dr~~-~~~~~l~~~G~~~----~~s~~e~~~~aDvV~l~vp~~~~ 215 (988)
+||||||+|+||.++|.+|.+. |++|++++++. ...+...+.|+.. +.++.++++++|+||+++|+...
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~ 134 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQ 134 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHH
T ss_pred CEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHH
Confidence 6999999999999999999999 99998777654 4456666778875 36899999999999999998765
Q ss_pred HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec-CcccCCcc----cc-c-----CCCe-EEE
Q 001973 216 AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD-APVSGGVK----RA-S-----MGEL-TIM 283 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld-apv~g~~~----~a-~-----~g~l-~~~ 283 (988)
..++ +++.+++++|++|+.+........ .+.......++.++- +|-..+.. .. . .|.- .+.
T Consensus 135 -~eVl---~eI~p~LK~GaILs~AaGf~I~~l---e~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liA 207 (525)
T 3fr7_A 135 -ADNY---EKIFSHMKPNSILGLSHGFLLGHL---QSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 207 (525)
T ss_dssp -HHHH---HHHHHHSCTTCEEEESSSHHHHHH---HHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEE
T ss_pred -HHHH---HHHHHhcCCCCeEEEeCCCCHHHH---hhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccCCccEEEE
Confidence 4576 478999999999877766432221 110001113444442 34322221 00 1 3443 233
Q ss_pred EeCC--HHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHH-H-HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Q 001973 284 AAGT--EESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMA-N-QLLAGVHIASAAEAMAFGARLGLNTRVLFNIITD 356 (988)
Q Consensus 284 ~gg~--~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~-~-N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~~ 356 (988)
+..+ .+..+.+..+++.+|...+ +....-.-.-..+. . ..+.+...+++--++..+.+.|++++..+....+
T Consensus 208 v~qd~tgea~e~alala~aiG~~~v-ieTtf~eE~e~DLfgeqtvLsG~~pAlieA~~d~lVe~G~~pe~Ay~~~~q 283 (525)
T 3fr7_A 208 VHQDVDGRATDVALGWSVALGSPFT-FATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVE 283 (525)
T ss_dssp EEECSSSCHHHHHHHHHHHTTCSEE-EECCHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCee-eeeeeeeehhHhhhhhHhhhcCcHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3333 4788999999999998642 22222211111121 1 1222333333333445678899999988776543
No 140
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.97 E-value=2.9e-10 Score=124.87 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=89.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||+++ +. +.....++.+++++||+|++++|...+++.++. ++
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~--~~ 195 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG----PWRFTNSLEEALREARAAVCALPLNKHTRGLVK--YQ 195 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC--HH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhC--HH
Confidence 36999999999999999999999999999999876 21 444567899999999999999999877777763 35
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
..+.+++|.++||+|++.+.....+.+.+.+.
T Consensus 196 ~l~~mk~gailin~srg~~vd~~aL~~aL~~g 227 (303)
T 1qp8_A 196 HLALMAEDAVFVNVGRAEVLDRDGVLRILKER 227 (303)
T ss_dssp HHTTSCTTCEEEECSCGGGBCHHHHHHHHHHC
T ss_pred HHhhCCCCCEEEECCCCcccCHHHHHHHHHhC
Confidence 77889999999999999888888898888763
No 141
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.97 E-value=9.3e-11 Score=129.25 Aligned_cols=107 Identities=18% Similarity=0.189 Sum_probs=88.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||+.+|++|...|++|++|||+++..+.+... ....++++++++||+|++++|...+++.++. ++
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~--~~~~~l~ell~~aDiV~l~~Plt~~t~~li~--~~ 214 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESY--VGREELRAFLNQTRVLINLLPNTAQTVGIIN--SE 214 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEE--ESHHHHHHHHHTCSEEEECCCCCGGGTTCBS--HH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhh--cccCCHHHHHhhCCEEEEecCCchhhhhhcc--HH
Confidence 4699999999999999999999999999999997653221111 1125788999999999999998877777763 45
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
.++.+++|.++||++.+.......+.+.+.+
T Consensus 215 ~l~~mk~gailIN~aRG~~vd~~aL~~aL~~ 245 (315)
T 3pp8_A 215 LLDQLPDGAYVLNLARGVHVQEADLLAALDS 245 (315)
T ss_dssp HHTTSCTTEEEEECSCGGGBCHHHHHHHHHH
T ss_pred HHhhCCCCCEEEECCCChhhhHHHHHHHHHh
Confidence 6788999999999999999999999999977
No 142
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.97 E-value=5.2e-10 Score=124.39 Aligned_cols=114 Identities=18% Similarity=0.101 Sum_probs=93.5
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
++|||||+|.||..+|++|...|++|++|||+++.. .+.+... .++++++++||+|++++|....++.++. .+.
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---~~~~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~--~~~ 222 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE---FEPFLTY-TDFDTVLKEADIVSLHTPLFPSTENMIG--EKQ 222 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG---GTTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBC--HHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh---hhccccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhh--HHH
Confidence 599999999999999999999999999999997651 1223443 3899999999999999998777777663 456
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
++.+++|.++||++++.+.....+.+.+.+.......+|.
T Consensus 223 l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV 262 (343)
T 2yq5_A 223 LKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDT 262 (343)
T ss_dssp HHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESC
T ss_pred HhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecc
Confidence 7889999999999999999999999999874333344553
No 143
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.96 E-value=7.5e-10 Score=123.93 Aligned_cols=108 Identities=17% Similarity=0.216 Sum_probs=91.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++||+++. .+.....|+.. .++.+++++||+|++++|...+++.++. .+
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~--~~ 251 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLP-RSMLEENGVEP-ASLEDVLTKSDFIFVVAAVTSENKRFLG--AE 251 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSC-HHHHHHTTCEE-CCHHHHHHSCSEEEECSCSSCC---CCC--HH
T ss_pred CCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCC-HHHHhhcCeee-CCHHHHHhcCCEEEEcCcCCHHHHhhcC--HH
Confidence 36999999999999999999999999999999863 34455667764 5899999999999999999888888774 46
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
.++.+++|.++||++.+.+.....+.+.+.+.
T Consensus 252 ~l~~mk~gailIN~aRG~~vde~aL~~aL~~g 283 (365)
T 4hy3_A 252 AFSSMRRGAAFILLSRADVVDFDALMAAVSSG 283 (365)
T ss_dssp HHHTSCTTCEEEECSCGGGSCHHHHHHHHHTT
T ss_pred HHhcCCCCcEEEECcCCchhCHHHHHHHHHcC
Confidence 77889999999999999999999999999873
No 144
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.95 E-value=8.3e-10 Score=124.80 Aligned_cols=109 Identities=13% Similarity=0.100 Sum_probs=94.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++||+++...+...+.|+....++++++++||+|++++|...+++.++. +.
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~--~~ 268 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIN--DE 268 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBS--HH
T ss_pred CCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhh--HH
Confidence 4699999999999999999999999999999987666656666887777899999999999999998776776663 35
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
.++.++++.++||++++.+.....+.+.+.+
T Consensus 269 ~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 269 TLKLFKRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp HHTTSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHhhCCCCCEEEECCCchHhhHHHHHHHHHc
Confidence 6678899999999999988888889998876
No 145
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.95 E-value=5.5e-10 Score=125.76 Aligned_cols=110 Identities=15% Similarity=0.189 Sum_probs=95.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCe-EEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFT-VIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.++|||||+|.||..+|++|...|++ |++|||++...+...+.|+...+++.+++++||+|++++|....++.++. +
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~ 241 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLIN--K 241 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBC--H
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhC--H
Confidence 46999999999999999999999997 99999998766666677877777899999999999999999877777663 3
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
..++.++++.++||++++.+.....+.+.+.+.
T Consensus 242 ~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g 274 (364)
T 2j6i_A 242 ELLSKFKKGAWLVNTARGAICVAEDVAAALESG 274 (364)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HHHhhCCCCCEEEECCCCchhCHHHHHHHHHcC
Confidence 567789999999999999988888999999873
No 146
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.94 E-value=7.4e-10 Score=123.45 Aligned_cols=106 Identities=18% Similarity=0.227 Sum_probs=90.6
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
++|||||+|.||..+|++|...|++|++||+++++. +.+ ++...+++.+++++||+|++++|...+++.++. +..
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~--~~~ 221 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMIN--DES 221 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBS--HHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHh--HHH
Confidence 589999999999999999999999999999998764 222 355556899999999999999998877777663 346
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
.+.++++.++|+++++.+.....+.+.+.+.
T Consensus 222 l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g 252 (333)
T 1j4a_A 222 IAKMKQDVVIVNVSRGPLVDTDAVIRGLDSG 252 (333)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 6789999999999999998889999999873
No 147
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.92 E-value=9.5e-10 Score=122.56 Aligned_cols=106 Identities=11% Similarity=0.144 Sum_probs=89.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|+.|...|++|++|||+++. +...+.|+... ++.+++++||+|++++|....++.++. +.
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~~g~~~~-~l~e~l~~aDiVil~vp~~~~t~~~i~--~~ 221 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKELKARYM-DIDELLEKSDIVILALPLTRDTYHIIN--EE 221 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHHHTEEEC-CHHHHHHHCSEEEECCCCCTTTTTSBC--HH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhhcCceec-CHHHHHhhCCEEEEcCCCChHHHHHhC--HH
Confidence 469999999999999999999999999999999876 44445576654 888999999999999999876777763 34
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
..+.++++ ++|++|++.+.....+.+.+.+
T Consensus 222 ~~~~mk~g-ilin~srg~~vd~~aL~~aL~~ 251 (333)
T 2d0i_A 222 RVKKLEGK-YLVNIGRGALVDEKAVTEAIKQ 251 (333)
T ss_dssp HHHHTBTC-EEEECSCGGGBCHHHHHHHHHT
T ss_pred HHhhCCCC-EEEECCCCcccCHHHHHHHHHc
Confidence 56778899 9999999988888888888876
No 148
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.91 E-value=1.1e-08 Score=124.85 Aligned_cols=187 Identities=13% Similarity=0.151 Sum_probs=131.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc----------------------CCcccCCHHHHhccC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV----------------------GGLIANSPAEAAKDV 203 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~----------------------G~~~~~s~~e~~~~a 203 (988)
..||||||.|.||..||..++.+|++|+++|++++..+...+. .+..+++.. .+++|
T Consensus 316 i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~a 394 (742)
T 3zwc_A 316 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTV 394 (742)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSC
T ss_pred ccEEEEEcccHHHHHHHHHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhC
Confidence 3699999999999999999999999999999999876543221 112344554 47899
Q ss_pred cEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHH--hcCCCceEecCcccCCcccccCCCeE
Q 001973 204 GVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQ--FEGKDLKLVDAPVSGGVKRASMGELT 281 (988)
Q Consensus 204 DvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~--~~~~g~~~ldapv~g~~~~a~~g~l~ 281 (988)
|+||-+|+..-+++.-++ .++-+.+++++|+...|+..|-+. +++.+. ++..|.||.+.| ..-.++
T Consensus 395 DlVIEAV~E~l~iK~~vf--~~le~~~~~~aIlASNTSsl~i~~--ia~~~~~p~r~ig~HFfnP~--------~~m~LV 462 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVF--AELSALCKPGAFLCTNTSALNVDD--IASSTDRPQLVIGTHFFSPA--------HVMRLL 462 (742)
T ss_dssp SEEEECCCSCHHHHHHHH--HHHHHHSCTTCEEEECCSSSCHHH--HHTTSSCGGGEEEEECCSST--------TTCCEE
T ss_pred CEEEEeccccHHHHHHHH--HHHhhcCCCCceEEecCCcCChHH--HHhhcCCccccccccccCCC--------CCCceE
Confidence 999999999988876655 677888899998887666555443 333221 222345655432 112234
Q ss_pred EEEe---CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Q 001973 282 IMAA---GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGARLGLNTRVLFNIIT 355 (988)
Q Consensus 282 ~~~g---g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~~Gid~~~~~~~l~ 355 (988)
-++. .+++.++.+..+.+.+|+..+++.+.+| ++.|-+ ...+++|++.+.+. |.+++++.+++.
T Consensus 463 Evi~g~~Ts~e~~~~~~~~~~~lgK~pV~vkd~pG------Fi~NRi---~~~~~~ea~~l~~e-G~~~~~id~a~~ 529 (742)
T 3zwc_A 463 EVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYG------FVGNRM---LAPYYNQGFFLLEE-GSKPEDVDGVLE 529 (742)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHTTCEEEECCCSTT------TTHHHH---HHHHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred EEecCCCCCHHHHHHHHHHHHHhCCCCcccCCCCC------ccHHHH---hhHHHHHHHHHHHc-CCCHHHHHHHHH
Confidence 3333 4789999999999999999877433344 344433 34568899988775 899999888765
No 149
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.91 E-value=1.5e-09 Score=128.66 Aligned_cols=107 Identities=16% Similarity=0.205 Sum_probs=91.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++||+++.. +...+.|+..+ ++.+++++||+|++|+|....++.++. ++
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~--~~ 217 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAAQLGIELL-SLDDLLARADFISVHLPKTPETAGLID--KE 217 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHHHHTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBC--HH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHhcCcEEc-CHHHHHhcCCEEEECCCCchHHHHHhC--HH
Confidence 469999999999999999999999999999998743 44555687765 899999999999999999866777763 23
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
+.+.++++.++||++++.+.....+.+.+.+
T Consensus 218 ~~~~~k~g~ilin~arg~iv~~~aL~~al~~ 248 (529)
T 1ygy_A 218 ALAKTKPGVIIVNAARGGLVDEAALADAITG 248 (529)
T ss_dssp HHTTSCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred HHhCCCCCCEEEECCCCchhhHHHHHHHHHc
Confidence 6778999999999999999888888888876
No 150
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.88 E-value=7.6e-10 Score=126.07 Aligned_cols=105 Identities=15% Similarity=0.156 Sum_probs=90.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|+++...|++|++||+++... ..++....++++++++||+|++++|...+++.++. ++
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~--~~ 218 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----LGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMG--AK 218 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----CTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBC--HH
T ss_pred CCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----cCCceecCCHHHHHhcCCEEEEccCCChHHHHHhh--HH
Confidence 4699999999999999999999999999999976531 12355677999999999999999999887877763 45
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
.++.+++|.++||+|++.+.....+.+.+.+
T Consensus 219 ~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~ 249 (404)
T 1sc6_A 219 EISLMKPGSLLINASRGTVVDIPALADALAS 249 (404)
T ss_dssp HHHHSCTTEEEEECSCSSSBCHHHHHHHHHT
T ss_pred HHhhcCCCeEEEECCCChHHhHHHHHHHHHc
Confidence 6788999999999999999888899998876
No 151
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=98.88 E-value=6.6e-10 Score=123.12 Aligned_cols=99 Identities=9% Similarity=0.020 Sum_probs=91.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
++||+++++++.+++|++.++++.|+|+ .++++++.+. .++.++.+.+++++++|.| |++ .||++++++++++.
T Consensus 194 l~~n~~~~~~~~~~~Ea~~la~~~Gld~-~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~g~~~---~KDl~~~~~~a~~~ 268 (312)
T 3qsg_A 194 MCRSAVLKGLEALFLEALAAAEKMGLAD-RVLASLDASF-PEHHLRDLALYLVERNLEHADRR---AHELGEVAATLCSV 268 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHS-GGGTHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHhcC-CchhHHHhhhHhhcCCCCcccch---HHHHHHHHHHHHHc
Confidence 5899999999999999999999999999 5889998887 4677788899999999999 875 79999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCC
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHAND 104 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~ 104 (988)
|+++|+.+.+.+.|+++.+.|++++
T Consensus 269 g~~~pl~~~~~~~~~~~~~~g~~~~ 293 (312)
T 3qsg_A 269 GVEPLVAEAGYRRLTRVAQVRAALK 293 (312)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCCcHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999988763
No 152
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.86 E-value=1.7e-09 Score=119.36 Aligned_cols=101 Identities=18% Similarity=0.163 Sum_probs=86.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|++|...|++|++|||++++.. + ...++.+++++||+|++++|....++.++. ++
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------~-~~~~l~ell~~aDvV~l~~p~~~~t~~li~--~~ 214 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------Y-PFLSLEELLKEADVVSLHTPLTPETHRLLN--RE 214 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------S-CBCCHHHHHHHCSEEEECCCCCTTTTTCBC--HH
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------c-ccCCHHHHHhhCCEEEEeCCCChHHHhhcC--HH
Confidence 46999999999999999999999999999999986543 2 256899999999999999999876777662 24
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHH
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQ 255 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~ 255 (988)
..+.++++.++||++++.+.....+.+.+.
T Consensus 215 ~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 215 RLFAMKRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp HHTTSCTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred HHhhCCCCcEEEECCCCCccCHHHHHHHHh
Confidence 667889999999999998888788888876
No 153
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.86 E-value=1.3e-09 Score=123.57 Aligned_cols=105 Identities=20% Similarity=0.159 Sum_probs=86.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|||||+|.||..+|+++...|++|++||+++... ..+.....++++++++||+|++++|...+++.++. ++
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~--~~ 229 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----YGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLIT--EA 229 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----BTTBEECSSHHHHHHHCSEEEECCCC-----CCBC--HH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----ccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcC--HH
Confidence 3699999999999999999999999999999975421 12445578999999999999999999888887763 45
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
.+..+++|.++||+|++.+.....+.+.+.+
T Consensus 230 ~l~~mk~gailIN~aRG~vvd~~aL~~aL~~ 260 (416)
T 3k5p_A 230 KLRKMKKGAFLINNARGSDVDLEALAKVLQE 260 (416)
T ss_dssp HHHHSCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred HHhhCCCCcEEEECCCChhhhHHHHHHHHHc
Confidence 6788999999999999999999999999976
No 154
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.85 E-value=3.8e-08 Score=114.21 Aligned_cols=198 Identities=12% Similarity=0.018 Sum_probs=142.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-c--hHHHHHHhHHHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-H--FLNAFIQNLGIALDMAK 77 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f--~l~l~~KDl~la~~~a~ 77 (988)
|+||++.+++++.+.|++.++++.|+|++.++++++..+ ++ +|..+.|.| | ....+.||+.++++.|+
T Consensus 236 l~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~----~~-----ri~~~~~~PG~G~GG~c~~KD~~~l~~~a~ 306 (478)
T 3g79_A 236 TAENTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSLK----GE-----GITRAVLWPGAGVGGHCLTKDTYHLERGVK 306 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC----CS-----SSCCCCCCCCSCCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc----hh-----hhccccCCCCCCcchhhHHHHHHHHHHHHH
Confidence 579999999999999999999999999999999998653 11 455567777 4 46789999999999999
Q ss_pred hcCCC-------CcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEE
Q 001973 78 TLAFP-------LPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVG 150 (988)
Q Consensus 78 ~~g~~-------~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIg 150 (988)
+.|++ +++..++.+.=+.... -+++.+.+..+.. .+ ..+..||+
T Consensus 307 ~~g~~~~~~~~~~~li~~~~~iN~~~~~---------~~~~~i~~~l~~~-----~~---------------~~~~~~v~ 357 (478)
T 3g79_A 307 IGRGELDYPEGADSIYVLARKVNDFMPA---------HMYNLTVAALERL-----GK---------------KMDGSKVA 357 (478)
T ss_dssp TSSCCCCCCSSCCCHHHHHHHHHHHHHH---------HHHHHHHHHHHTT-----TC---------------CSTTCEEE
T ss_pred HcCCCcccccchhHHHHHHHHHHHHHHH---------HHHHHHHHHHhhc-----cc---------------CCCCCEEE
Confidence 99987 8888888877554332 1333222211100 00 00124899
Q ss_pred EEccch----------HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 151 FIGLGA----------MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 151 iIG~G~----------mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
|+|+-. =...++..|.+.|.+|.+||..... + .+...+.++.++++++|.|++++..+. .+..-
T Consensus 358 vlGlafK~~tdD~R~Sp~~~i~~~L~~~g~~V~~~DP~~~~---~--~~~~~~~~~~~~~~~ad~vvi~t~~~~-f~~~d 431 (478)
T 3g79_A 358 MLGWAFIKDSDDARNTPSEPYRDLCLKAGASVMVHDPYVVN---Y--PGVEISDNLEEVVRNADAIVVLAGHSA-YSSLK 431 (478)
T ss_dssp EECSSSSTTCSCCTTCTHHHHHHHHHHHTCEEEEECSSCCC---B--TTBCEESCHHHHHTTCSEEEECSCCHH-HHSCC
T ss_pred EEeeecCCCCcchhcCcHHHHHHHHHHCCCEEEEECCCccc---c--cCcceecCHHHHHhcCCEEEEecCCHH-HHhhh
Confidence 998753 3688999999999999999987552 1 123457889999999999999999866 33211
Q ss_pred ccccchhhhCC-CCCEEEecCCCCH
Q 001973 221 YGDLGAVSALS-SGASIILSSTVSP 244 (988)
Q Consensus 221 ~~~~~i~~~l~-~g~ivId~st~~p 244 (988)
.+.+...++ +..+|+|.-+...
T Consensus 432 --~~~~~~~~~~~~~~i~D~rn~~~ 454 (478)
T 3g79_A 432 --ADWAKKVSAKANPVIIDGRNVIE 454 (478)
T ss_dssp --HHHHHHHHCCSSCEEEESSSCSC
T ss_pred --HHHHHHHhccCCCEEEECCCCCC
Confidence 023334444 3789999887754
No 155
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.84 E-value=1.9e-09 Score=120.75 Aligned_cols=104 Identities=17% Similarity=0.121 Sum_probs=88.2
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHH----HHHHHcc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQ----AESVLYG 222 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~----~~~vl~~ 222 (988)
++|||||+|.||..+|++|...|++|.+||++.+... +.....++++++++||+|++++|...+ ++.++.
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~-----~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~- 193 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG-----DEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLAD- 193 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT-----CCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBC-
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc-----cCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcC-
Confidence 5999999999999999999999999999998644321 233467899999999999999998776 666663
Q ss_pred ccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 223 DLGAVSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
.+.+..+++|.++||++.+.+.....+.+.+.+.
T Consensus 194 -~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g 227 (381)
T 3oet_A 194 -ETLIRRLKPGAILINACRGPVVDNAALLARLNAG 227 (381)
T ss_dssp -HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTT
T ss_pred -HHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhC
Confidence 4567889999999999999999999999999873
No 156
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.82 E-value=1.5e-09 Score=120.79 Aligned_cols=105 Identities=18% Similarity=0.149 Sum_probs=88.3
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
++|||||+|.||..+|++|...|++|++|||++++. + +.++. ..++.+++++||+|++++|....++.++. ++.
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~-~~~l~ell~~aDvV~~~~p~t~~t~~li~--~~~ 220 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I-EDYCT-QVSLDEVLEKSDIITIHAPYIKENGAVVT--RDF 220 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C-TTTCE-ECCHHHHHHHCSEEEECCCCCTTTCCSBC--HHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H-Hhccc-cCCHHHHHhhCCEEEEecCCchHHHHHhC--HHH
Confidence 589999999999999999999999999999987653 2 22333 34899999999999999998776666653 356
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~~ 257 (988)
.+.+++|.++||+|++.+.....+.+.+.+.
T Consensus 221 l~~mk~ga~lin~srg~~vd~~aL~~aL~~g 251 (331)
T 1xdw_A 221 LKKMKDGAILVNCARGQLVDTEAVIEAVESG 251 (331)
T ss_dssp HHTSCTTEEEEECSCGGGBCHHHHHHHHHHT
T ss_pred HhhCCCCcEEEECCCcccccHHHHHHHHHhC
Confidence 7789999999999999998889999999873
No 157
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.81 E-value=2.2e-09 Score=119.55 Aligned_cols=104 Identities=19% Similarity=0.131 Sum_probs=88.8
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
++|||||+|.||..+|++|...|++|++||++++.. + ..++. ..++.+++++||+|++++|...+++.++. ++.
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~~~-~~~l~ell~~aDvV~~~~P~~~~t~~li~--~~~ 219 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPDFD-YVSLEDLFKQSDVIDLHVPGIEQNTHIIN--EAA 219 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTTCE-ECCHHHHHHHCSEEEECCCCCGGGTTSBC--HHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhccc-cCCHHHHHhcCCEEEEcCCCchhHHHHhC--HHH
Confidence 589999999999999999999999999999987643 1 22333 34899999999999999999887777663 456
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
++.+++|.++||++++.+.....+.+.+.+
T Consensus 220 l~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 249 (333)
T 1dxy_A 220 FNLMKPGAIVINTARPNLIDTQAMLSNLKS 249 (333)
T ss_dssp HHHSCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 788999999999999999888999999886
No 158
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.77 E-value=4.4e-09 Score=118.22 Aligned_cols=113 Identities=18% Similarity=0.130 Sum_probs=91.3
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHH----HHHHHcc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQ----AESVLYG 222 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~----~~~vl~~ 222 (988)
++|||||+|.||..+|++|...|++|++||++++.. ..|.. ..++++++++||+|++++|...+ ++.++.
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----~~g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~- 190 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR----EPDGE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLD- 190 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH----STTSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBC-
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh----ccCcc-cCCHHHHHHhCCEEEEeccCccccccchhhhcC-
Confidence 599999999999999999999999999999876542 23433 46899999999999999998776 666653
Q ss_pred ccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 223 DLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
++.++.+++|.++||+|++.+.....+.+.+.+.......+|.
T Consensus 191 -~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV 233 (380)
T 2o4c_A 191 -EPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDV 233 (380)
T ss_dssp -HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESC
T ss_pred -HHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeee
Confidence 4567889999999999999998889999998763222334553
No 159
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.73 E-value=2.4e-07 Score=108.27 Aligned_cols=197 Identities=14% Similarity=0.062 Sum_probs=139.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-ch--HHHHHHhHHHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HF--LNAFIQNLGIALDMAK 77 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~--l~l~~KDl~la~~~a~ 77 (988)
+++|.+.++++..+.|+..++++.|+|++.+.+.+.. .+++....|.| |. ...+.||++++.+.|+
T Consensus 223 l~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~i~~-----------~~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~ 291 (478)
T 2y0c_A 223 YAANAMLATRISFMNELANLADRFGADIEAVRRGIGS-----------DPRIGYHFLYAGCGYGGSCFPKDVEALIRTAD 291 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT-----------STTTCSTTCCCSSCCCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhc-----------CCccCcccCCCCcccccCcCHHHHHHHHHHHH
Confidence 4789999999999999999999999999999988862 13344445566 43 3457999999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccch-
Q 001973 78 TLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLGA- 156 (988)
Q Consensus 78 ~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G~- 156 (988)
+.|+++|+.+++.+.++.... -+++.+.+..+.. .+..+|+|+|+-.
T Consensus 292 ~~gv~~pl~~~v~~in~~~~~---------~~~~~~~~~~~~~-----------------------~~~~~v~vlGlafK 339 (478)
T 2y0c_A 292 EHGQSLQILKAVSSVNATQKR---------VLADKIVARFGED-----------------------LTGRTFAIWGLAFK 339 (478)
T ss_dssp HTTCCCHHHHHHHHHHHHHTT---------HHHHHHHHHHCSC-----------------------CTTCEEEEECCSSS
T ss_pred HcCCCcHHHHHHHHHHHHhHH---------HHHHHHHHHhccc-----------------------CCCCEEEEEecccC
Confidence 999999999999999985433 2343333322210 0124788888753
Q ss_pred ---------HHHHHHHHHHhCCCeEEEEeCChhH-HHH-HHh---------cCCcccCCHHHHhccCcEEEEEcCChHHH
Q 001973 157 ---------MGFGMATHLLRSNFTVIGYDVYRPT-LTK-FQN---------VGGLIANSPAEAAKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 157 ---------mG~~lA~~L~~~G~~V~v~dr~~~~-~~~-l~~---------~G~~~~~s~~e~~~~aDvV~l~vp~~~~~ 216 (988)
=...++..|.+.|.+|.+||..... ... +.. ..+..++++.++++++|+|++++..+. .
T Consensus 340 ~~~dD~R~Sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~~~~-f 418 (478)
T 2y0c_A 340 PNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKI-F 418 (478)
T ss_dssp SSCCCCTTCHHHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHTTTCHHHHTTEEECSSHHHHTTTCSEEEECSCCGG-G
T ss_pred CCCCccccChHHHHHHHHHHCCCEEEEECCCccHHHHHhhccccccccccccceeecCCHHHHHhCCCEEEEecCChH-h
Confidence 5678899999999999999986432 111 110 135667889999999999999999865 2
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCH
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSP 244 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p 244 (988)
+.+-. +.+...+ ...+|+|.-+...
T Consensus 419 ~~~~~--~~~~~~~-~~~~i~D~r~~~~ 443 (478)
T 2y0c_A 419 KSPDF--VALGRLW-KTPVIFDGRNLYE 443 (478)
T ss_dssp GSCCH--HHHHTTC-SSCEEEESSCCSC
T ss_pred hccCH--HHHHhhc-CCCEEEECCCCCC
Confidence 21100 1222223 3589999988754
No 160
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.71 E-value=1.4e-07 Score=110.45 Aligned_cols=198 Identities=9% Similarity=0.021 Sum_probs=138.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-c--hHHHHHHhHHHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-H--FLNAFIQNLGIALDMAK 77 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f--~l~l~~KDl~la~~~a~ 77 (988)
+++|.+.+++++.+.|+..++++.|+|++.+.++++.++ ++....|.| | ....+.||+++++..|+
T Consensus 228 l~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~~~~~-----------ri~~~~~~pg~g~gg~c~~KD~~~l~~~A~ 296 (481)
T 2o3j_A 228 LVANAFLAQRISSINSISAVCEATGAEISEVAHAVGYDT-----------RIGSKFLQASVGFGGSCFQKDVLSLVYLCE 296 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHTST-----------TTCSSSCCCCSCCCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHccCC-----------CCCCCCCCCCCccCCccHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999998764 222334566 4 56678999999999999
Q ss_pred hcCCC--CcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccc
Q 001973 78 TLAFP--LPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLG 155 (988)
Q Consensus 78 ~~g~~--~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G 155 (988)
+.|++ +|+.+++.+.=+.... -+++.+.+..+.. .+..+|+|+|+-
T Consensus 297 ~~g~~~~~~l~~~~~~~N~~~~~---------~~~~~~~~~l~~~-----------------------~~~~~v~vlGla 344 (481)
T 2o3j_A 297 SLNLPQVADYWQGVININNWQRR---------RFADKIIAELFNT-----------------------VTDKKIAIFGFA 344 (481)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHTTTC-----------------------CTTCEEEEECCS
T ss_pred HcCCCccchHHHHHHHHHHhhHH---------HHHHHHHHhhccc-----------------------cCCCeEEEEeee
Confidence 99999 8988887743322211 1233222221100 012478888874
Q ss_pred ----------hHHHHHHHHHHhCCCeEEEEeCChhHH---HHHHh--------cCCcccCCHHHHhccCcEEEEEcCChH
Q 001973 156 ----------AMGFGMATHLLRSNFTVIGYDVYRPTL---TKFQN--------VGGLIANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 156 ----------~mG~~lA~~L~~~G~~V~v~dr~~~~~---~~l~~--------~G~~~~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
.-...+...|.+.|.+|.+||...... .+... ..+..++++.++++++|.|++++..+.
T Consensus 345 fK~~~dd~R~Spa~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~~~~ 424 (481)
T 2o3j_A 345 FKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITVESDPYAAARGAHAIVVLTEWDE 424 (481)
T ss_dssp SSTTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEEESSHHHHHTTCSEEEECSCCGG
T ss_pred eCCCCCccccChHHHHHHHHHHCCCEEEEECCCCCchhhHHHHHhhhccccccCceeecCCHHHHHcCCCEEEEcCCcHH
Confidence 466789999999999999999764221 12221 124456788899999999999998865
Q ss_pred HHHHHHccccchhhhCCCCCEEEecCCCCH
Q 001973 215 QAESVLYGDLGAVSALSSGASIILSSTVSP 244 (988)
Q Consensus 215 ~~~~vl~~~~~i~~~l~~g~ivId~st~~p 244 (988)
.+.+- .+.+...+....+|+|.-+...
T Consensus 425 -f~~~~--~~~~~~~~~~~~~i~D~r~~~~ 451 (481)
T 2o3j_A 425 -FVELN--YSQIHNDMQHPAAIFDGRLILD 451 (481)
T ss_dssp -GTTSC--HHHHHHHSCSSCEEEESSSCSC
T ss_pred -hhccC--HHHHHHhcCCCCEEEECCCCCC
Confidence 32210 0234444555668999887753
No 161
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=98.69 E-value=1e-08 Score=114.89 Aligned_cols=57 Identities=11% Similarity=0.145 Sum_probs=38.1
Q ss_pred cccccHHHHHHHHHHC-CceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhccc
Q 001973 919 VRISSTKELLLNAEKG-EYAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFKVQ 975 (988)
Q Consensus 919 ~~lv~~~~ll~~A~~~-~yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~~~ 975 (988)
|+|+||++||+.|+++ +|||++||+.|+|+++|++++||+.++||||+++++.++++
T Consensus 3 M~l~~mkelL~~ak~g~~~gi~av~~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~ 60 (450)
T 3txv_A 3 MQENHLIDIARWSERPGPRGIPSICSAHPLVIEAAMLRAHREKAPVLIEATCNQVNQD 60 (450)
T ss_dssp ------------------CCEEEECCCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTT
T ss_pred ccccCHHHHHHHHHhCCCcEEEEeCcCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhc
Confidence 8899999999999986 69999999999999999999999999999999999988763
No 162
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.69 E-value=3e-08 Score=95.70 Aligned_cols=104 Identities=19% Similarity=0.180 Sum_probs=81.1
Q ss_pred CCeEEEEcc----chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 146 VTRVGFIGL----GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 146 ~~kIgiIG~----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
..+|+|||+ |.||..++++|.+.||+|+.+|++.+.+ .|.+...|+.|+.+.+|++++++|. ..+.+++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----~G~~~~~s~~el~~~vDlvii~vp~-~~v~~v~- 86 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPP-KVGLQVA- 86 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCH-HHHHHHH-
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----CCeeecCCHHHhCCCCCEEEEEeCH-HHHHHHH-
Confidence 458999999 9999999999999999977666654332 4888889999999999999999994 6677777
Q ss_pred cccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec
Q 001973 222 GDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD 265 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld 265 (988)
+++.+ ...+.+|++.++. .+++.+...+ .|+++++
T Consensus 87 --~~~~~-~g~~~i~~~~~~~----~~~l~~~a~~--~Gi~~ig 121 (138)
T 1y81_A 87 --KEAVE-AGFKKLWFQPGAE----SEEIRRFLEK--AGVEYSF 121 (138)
T ss_dssp --HHHHH-TTCCEEEECTTSC----CHHHHHHHHH--HTCEEEC
T ss_pred --HHHHH-cCCCEEEEcCccH----HHHHHHHHHH--CCCEEEc
Confidence 34444 4456788888775 4666666665 4788886
No 163
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.68 E-value=8.3e-08 Score=112.18 Aligned_cols=198 Identities=10% Similarity=0.009 Sum_probs=137.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc---chHHHHHHhHHHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL---HFLNAFIQNLGIALDMAK 77 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~---f~l~l~~KDl~la~~~a~ 77 (988)
+++|.+.+++++.+.|++.++++.|+|++.+.++++..+..++ ..|.| |....+.||++++++.|+
T Consensus 222 l~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~~~~-----------~~~~pg~g~gg~c~~kD~~~l~~~a~ 290 (467)
T 2q3e_A 222 LAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGN-----------KFLKASVGFGGSCFQKDVLNLVYLCE 290 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTSTTTCS-----------SSCCCCSCCCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCCCCCc-----------cccCCCCCCCCccHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999987653221 11233 345567799999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHhhCc-CCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccch
Q 001973 78 TLAFPLPLLAVAHQQLILGLSHA-HANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLGA 156 (988)
Q Consensus 78 ~~g~~~p~~~~~~~~~~~a~~~G-~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G~ 156 (988)
+.|++ .+.++|+++.+.+ ++.+++... +.+...+ ..+..||+|+|+-.
T Consensus 291 ~~g~~-----~~~~~~~~~~~~n~~~~~~~~~~--~~~~~~~------------------------~~~~~~v~vlGlaf 339 (467)
T 2q3e_A 291 ALNLP-----EVARYWQQVIDMNDYQRRRFASR--IIDSLFN------------------------TVTDKKIAILGFAF 339 (467)
T ss_dssp HTTCH-----HHHHHHHHHHHHHHHHHHHHHHH--HHHHTTT------------------------CCTTCEEEEECCSS
T ss_pred HcCCc-----hHHHHHHHHHHHHHHhHHHHHHH--HHHHhhc------------------------ccCCCEEEEEeecc
Confidence 99975 5567777777654 233333221 1111111 01225899999976
Q ss_pred ----------HHHHHHHHHHhCCCeEEEEeCCh--hHHHHHH-----------hcCCcccCCHHHHhccCcEEEEEcCCh
Q 001973 157 ----------MGFGMATHLLRSNFTVIGYDVYR--PTLTKFQ-----------NVGGLIANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 157 ----------mG~~lA~~L~~~G~~V~v~dr~~--~~~~~l~-----------~~G~~~~~s~~e~~~~aDvV~l~vp~~ 213 (988)
-...++..|.+.|.+|.+||... +...... ..++..++++.++++++|.|++++..+
T Consensus 340 K~~~dD~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~vi~t~~~ 419 (467)
T 2q3e_A 340 KKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWD 419 (467)
T ss_dssp STTCCCCTTCHHHHHHHHHHHTTCEEEEECSSSCHHHHHHHHCC------CHHHHHEEECSSHHHHHTTCSEEEECSCCG
T ss_pred CCCCcchhhChHHHHHHHHHHCCCEEEEEcCccCHHHHhhhhccccccccccccCceeecCCHHHHHhCCcEEEEecCCh
Confidence 78899999999999999999853 2221111 013455678899999999999999986
Q ss_pred HHHHHHHccccchhhhCCCCCEEEecCCCC
Q 001973 214 AQAESVLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 214 ~~~~~vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
. .+.+- .+.+...+....+|+|.-+..
T Consensus 420 ~-f~~~~--~~~~~~~~~~~~~i~D~r~~~ 446 (467)
T 2q3e_A 420 M-FKELD--YERIHKKMLKPAFIFDGRRVL 446 (467)
T ss_dssp G-GGGSC--HHHHHHHSCSSCEEEESSCTT
T ss_pred h-hhcCC--HHHHHHhcCCCCEEEeCCCcC
Confidence 5 32210 123444455556699987765
No 164
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.63 E-value=4.3e-07 Score=105.21 Aligned_cols=187 Identities=13% Similarity=0.138 Sum_probs=136.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccc--cCCCCc---chHHHHHHhHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLL--RGDAKL---HFLNAFIQNLGIALDM 75 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~--~~~~~~---f~l~l~~KDl~la~~~ 75 (988)
+++|.+.+..+..+.|+..++++.|+|++.+.+++... +++. ++.|.| |....+.||++++.+.
T Consensus 211 l~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~-----------~r~~~~~~~~~pg~g~gg~~~~kD~~~l~~~ 279 (436)
T 1mv8_A 211 YTCNVWHAAKVTFANEIGNIAKAVGVDGREVMDVICQD-----------HKLNLSRYYMRPGFAFGGSCLPKDVRALTYR 279 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTC-----------TTTTTSSTTCSCCSCCCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-----------CCCCCcccCCCCcccccCcCcHhhHHHHHHH
Confidence 36799999999999999999999999999999998752 2222 344555 5567899999999999
Q ss_pred HHhcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccc
Q 001973 76 AKTLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLG 155 (988)
Q Consensus 76 a~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G 155 (988)
|++.|+++|+.+++.+..+...+. +++.+.+. +..||+|+|+.
T Consensus 280 a~~~g~~~pl~~~v~~in~~~~~~---------~~~~~~~~----------------------------~~~~v~vlGla 322 (436)
T 1mv8_A 280 ASQLDVEHPMLGSLMRSNSNQVQK---------AFDLITSH----------------------------DTRKVGLLGLS 322 (436)
T ss_dssp HHHTTCCCTTGGGHHHHHHHHHHH---------HHHHHTTS----------------------------SCCEEEEECCS
T ss_pred HHHcCCCcHHHHHHHHHHhHhHHH---------HHHHHHHh----------------------------cCCEEEEEccc
Confidence 999999999999998886533221 22222211 12489999997
Q ss_pred ----------hHHHHHHHHHHhCCCeEEEEeCChhHHH------HHHhc--C---CcccCCHHHHhccCcEEEEEcCChH
Q 001973 156 ----------AMGFGMATHLLRSNFTVIGYDVYRPTLT------KFQNV--G---GLIANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 156 ----------~mG~~lA~~L~~~G~~V~v~dr~~~~~~------~l~~~--G---~~~~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
.-...++..|.+.|.+|.+||..-+... .+... + ...++++.++++++|+|++++..+.
T Consensus 323 fK~~~~d~r~s~~~~i~~~L~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~vi~~~~~~ 402 (436)
T 1mv8_A 323 FKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVASSDVLVLGNGDEL 402 (436)
T ss_dssp SSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHHCSEEEECSCCGG
T ss_pred cCCCCCccccCcHHHHHHHHHHCCCEEEEECCCCChhhccchhhhhcccccccccccccCCHHHHHhCCcEEEEeCCcHH
Confidence 5688999999999999999997633321 12110 0 1557888999999999999999865
Q ss_pred HHHHHHccccchhhhCCCCCEEEecCCCC
Q 001973 215 QAESVLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 215 ~~~~vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
.+.+- ..+.++.+|+|.-+..
T Consensus 403 -~~~~~-------~~~~~~~~i~D~r~~~ 423 (436)
T 1mv8_A 403 -FVDLV-------NKTPSGKKLVDLVGFM 423 (436)
T ss_dssp -GHHHH-------HSCCTTCEEEESSSCC
T ss_pred -HHhhh-------HHhcCCCEEEECCCCC
Confidence 44332 1122367899987754
No 165
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=98.57 E-value=4e-08 Score=110.34 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=54.5
Q ss_pred HHHHHHHHHHCC-ceeeeeccCchhHHHHHHHHHHHcCCCEEEEeccchhc----ccC--HH-HHHhhh
Q 001973 924 TKELLLNAEKGE-YAVGAFNVYNMEGVEAVVAAAEEERSPAILQVRSTCFK----VQY--IT-LVTSSI 984 (988)
Q Consensus 924 ~~~ll~~A~~~~-yav~afn~~~~e~~~a~~~aAe~~~~Pvil~~~~~~~~----~~~--~~-~~~~~~ 984 (988)
|++||+.|++++ |||+|||+.|+|+++|++++||+.++|||||++++.++ |.| ++ +..++.
T Consensus 1 ~~~ll~~~~~~~a~av~afn~~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~ 69 (420)
T 2fiq_A 1 MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVF 69 (420)
T ss_dssp CHHHHHHHHTTCCBCEEEECCCCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHH
T ss_pred CHHHHHHHHcCCceEEEEeccCCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHH
Confidence 589999999999 99999999999999999999999999999999999998 888 44 334443
No 166
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.56 E-value=5.8e-08 Score=105.38 Aligned_cols=109 Identities=16% Similarity=0.191 Sum_probs=82.1
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHH--HHHHccc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQA--ESVLYGD 223 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~--~~vl~~~ 223 (988)
++|+|||+|.||.+++..|.+.|++|++|||++++.+++.+. |+...+++.++++++|+||+|+|....- ...+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i--- 206 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIF--- 206 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSS---
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCC---
Confidence 589999999999999999999999999999999998887654 6566668888889999999999986521 1111
Q ss_pred cchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 224 LGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
. .+.+.++.+++|+++ .. ..+.+...+ .|..++++
T Consensus 207 ~--~~~l~~g~~viDv~~-~~---t~ll~~a~~--~g~~~v~g 241 (275)
T 2hk9_A 207 N--YDLIKKDHVVVDIIY-KE---TKLLKKAKE--KGAKLLDG 241 (275)
T ss_dssp C--GGGCCTTSEEEESSS-SC---CHHHHHHHH--TTCEEECS
T ss_pred C--HHHcCCCCEEEEcCC-Ch---HHHHHHHHH--CcCEEECC
Confidence 0 245788999999998 22 223333334 45666654
No 167
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.55 E-value=7.9e-07 Score=85.33 Aligned_cols=110 Identities=14% Similarity=0.163 Sum_probs=76.0
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CCcc-c---CCHHH---H-hccCcEEEEEcCChHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GGLI-A---NSPAE---A-AKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~-~---~s~~e---~-~~~aDvV~l~vp~~~~~ 216 (988)
.|+|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+.+. |... . .+... + ++++|+||+|+|++...
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~ 83 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 83 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHH
Confidence 3699999999999999999999999999999999999888754 6532 1 22222 1 56899999999987543
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCc
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAP 267 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldap 267 (988)
..+. ...+.+.++++|+..++ +...+ .+.+ .|+.++..|
T Consensus 84 ~~~~----~~~~~~~~~~ii~~~~~--~~~~~----~l~~--~g~~~v~~p 122 (140)
T 1lss_A 84 LMSS----LLAKSYGINKTIARISE--IEYKD----VFER--LGVDVVVSP 122 (140)
T ss_dssp HHHH----HHHHHTTCCCEEEECSS--TTHHH----HHHH--TTCSEEECH
T ss_pred HHHH----HHHHHcCCCEEEEEecC--HhHHH----HHHH--cCCCEEECH
Confidence 3332 34555667777775544 33322 3333 356566555
No 168
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.53 E-value=1.4e-07 Score=101.81 Aligned_cols=108 Identities=17% Similarity=0.145 Sum_probs=81.8
Q ss_pred eEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHH--HHHHHcccc
Q 001973 148 RVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQ--AESVLYGDL 224 (988)
Q Consensus 148 kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~--~~~vl~~~~ 224 (988)
+|+|||+|.||.+++..|.+.|++|++|||++++.+.+.+. |.. .+++.++ +++|+|++|+|.+.. +..++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l---- 191 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSASPL---- 191 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCSS----
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCCC----
Confidence 89999999999999999999999999999999988877654 554 5677888 999999999998641 11112
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
. .+.++++++++|+++. |..+ ++.+...+ .|..++++
T Consensus 192 ~-~~~l~~g~~viD~~~~-p~~t-~l~~~a~~--~g~~~v~g 228 (263)
T 2d5c_A 192 P-AELFPEEGAAVDLVYR-PLWT-RFLREAKA--KGLKVQTG 228 (263)
T ss_dssp C-GGGSCSSSEEEESCCS-SSSC-HHHHHHHH--TTCEEECS
T ss_pred C-HHHcCCCCEEEEeecC-Cccc-HHHHHHHH--CcCEEECc
Confidence 1 3567889999999987 4333 35555555 45566543
No 169
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.52 E-value=1.3e-07 Score=103.99 Aligned_cols=110 Identities=17% Similarity=0.227 Sum_probs=84.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc--cCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI--ANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~--~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
.++|+|||+|.||..+++.|...|++|++|||++++.+.+.+.|... ..++.++++++|+|++++|... + .
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~-----i-~- 229 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMI-----L-N- 229 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCC-----B-C-
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhh-----h-C-
Confidence 46999999999999999999999999999999998887776667653 3578888999999999999732 1 1
Q ss_pred cchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCc
Q 001973 224 LGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAP 267 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldap 267 (988)
+.....++++.++||++.....+. + +.... .|..+++.|
T Consensus 230 ~~~~~~mk~g~~lin~a~g~~~~~--~-~~a~~--~G~~~i~~p 268 (300)
T 2rir_A 230 QTVLSSMTPKTLILDLASRPGGTD--F-KYAEK--QGIKALLAP 268 (300)
T ss_dssp HHHHTTSCTTCEEEECSSTTCSBC--H-HHHHH--HTCEEEECC
T ss_pred HHHHHhCCCCCEEEEEeCCCCCcC--H-HHHHH--CCCEEEECC
Confidence 234566889999999997643331 2 22223 367777776
No 170
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.49 E-value=5.7e-07 Score=99.31 Aligned_cols=100 Identities=20% Similarity=0.192 Sum_probs=73.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCC--CeEEEEeCChhHHHHHHhc----------CCcc-cCCHHHHhccCcEEEEEcCCh
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSN--FTVIGYDVYRPTLTKFQNV----------GGLI-ANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~l~~~----------G~~~-~~s~~e~~~~aDvV~l~vp~~ 213 (988)
|||+|||+|.||+++|..|+++| ++|++||+++++++.+... .... ++++ ++++++|+||++++.+
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLGNI 80 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecCCc
Confidence 69999999999999999999999 8999999999888766531 1333 4566 7789999999999986
Q ss_pred HH-------------------HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHH
Q 001973 214 AQ-------------------AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLER 252 (988)
Q Consensus 214 ~~-------------------~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~ 252 (988)
.. ++++. +.+.+.. ++.+++. .|.+.+....+..
T Consensus 81 ~~~~~~~g~~r~~l~~~n~~i~~~i~---~~i~~~~-~~~~ii~-~tNp~~~~~~~~~ 133 (309)
T 1hyh_A 81 KLQQDNPTGDRFAELKFTSSMVQSVG---TNLKESG-FHGVLVV-ISNPVDVITALFQ 133 (309)
T ss_dssp GGTC-------CTTHHHHHHHHHHHH---HHHHHTT-CCSEEEE-CSSSHHHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHHC-CCcEEEE-EcCcHHHHHHHHH
Confidence 63 34555 4455544 5666666 4445555433433
No 171
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.49 E-value=7.2e-08 Score=107.93 Aligned_cols=114 Identities=20% Similarity=0.230 Sum_probs=88.6
Q ss_pred CCCeEEEEccchHHHHHHHHHHh--CCCeEEEEeCChhHHHHHHhc-----C--CcccCCHHHHhccCcEEEEEcCChHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLR--SNFTVIGYDVYRPTLTKFQNV-----G--GLIANSPAEAAKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~l~~~-----G--~~~~~s~~e~~~~aDvV~l~vp~~~~ 215 (988)
..++|+|||+|.||..++..|.. ...+|++|||++++.+++.+. | +..+++++++++++|+|++|+|+..
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~- 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA- 206 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS-
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC-
Confidence 45699999999999999998864 347899999999999988764 5 3457899999999999999999862
Q ss_pred HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCc
Q 001973 216 AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAP 267 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldap 267 (988)
...++. ...+++|+.|++.++..|. .+++...+.. ++..|+|..
T Consensus 207 ~~pvl~-----~~~l~~G~~V~~vgs~~p~-~~El~~~~~~--~a~v~vD~~ 250 (350)
T 1x7d_A 207 YATIIT-----PDMLEPGMHLNAVGGDCPG-KTELHADVLR--NARVFVEYE 250 (350)
T ss_dssp EEEEEC-----GGGCCTTCEEEECSCCBTT-BEEECHHHHH--TSEEEESSH
T ss_pred CCceec-----HHHcCCCCEEEECCCCCCC-ceeeCHHHHh--cCcEEECCH
Confidence 122321 2467899999999999888 5666655554 345777753
No 172
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.48 E-value=8.9e-08 Score=93.29 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=78.9
Q ss_pred CeEEEEcc----chHHHHHHHHHHhCCCeEEEEeCCh--hHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 147 TRVGFIGL----GAMGFGMATHLLRSNFTVIGYDVYR--PTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 147 ~kIgiIG~----G~mG~~lA~~L~~~G~~V~v~dr~~--~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
.+|+|||+ |.||..++++|.+.||+|+.+|++. +.+ .|.+...|+.|+.+.+|++++|+|. ..+.+++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----~G~~~~~sl~el~~~~Dlvii~vp~-~~v~~v~ 87 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----LGQQGYATLADVPEKVDMVDVFRNS-EAAWGVA 87 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----TTEECCSSTTTCSSCCSEEECCSCS-THHHHHH
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----CCeeccCCHHHcCCCCCEEEEEeCH-HHHHHHH
Confidence 58999999 8999999999999999977777665 332 4788888999988899999999996 5577776
Q ss_pred ccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEe
Q 001973 221 YGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLV 264 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~l 264 (988)
+++.+ ...+.+|++.++. .+++.+.+.+ .|++++
T Consensus 88 ---~~~~~-~g~~~i~i~~~~~----~~~l~~~a~~--~Gi~~i 121 (145)
T 2duw_A 88 ---QEAIA-IGAKTLWLQLGVI----NEQAAVLARE--AGLSVV 121 (145)
T ss_dssp ---HHHHH-HTCCEEECCTTCC----CHHHHHHHHT--TTCEEE
T ss_pred ---HHHHH-cCCCEEEEcCChH----HHHHHHHHHH--cCCEEE
Confidence 34444 3445688887666 4666666665 578887
No 173
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.47 E-value=3.4e-07 Score=89.03 Aligned_cols=88 Identities=13% Similarity=0.143 Sum_probs=72.0
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CCc--ccCCHHHHhccCcEEEEEcCChHHHHHHHcc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GGL--IANSPAEAAKDVGVLVIMVTNEAQAESVLYG 222 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~--~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~ 222 (988)
.++|+|||+|.||..++..|.+.|++|++|||++++.+.+.+. |.. ..++..++++++|+||.|+|.+.. ++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~---~~-- 95 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTP---IV-- 95 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSC---SB--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCc---Ee--
Confidence 4699999999999999999999999999999999998886643 543 467888999999999999998631 11
Q ss_pred ccchhhhCCCCCEEEecCC
Q 001973 223 DLGAVSALSSGASIILSST 241 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st 241 (988)
. ...+.+|.+++|.+.
T Consensus 96 --~-~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 96 --E-ERSLMPGKLFIDLGN 111 (144)
T ss_dssp --C-GGGCCTTCEEEECCS
T ss_pred --e-HHHcCCCCEEEEccC
Confidence 1 245678999999874
No 174
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.46 E-value=1.5e-07 Score=104.63 Aligned_cols=105 Identities=22% Similarity=0.262 Sum_probs=89.2
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
++|||||+|.+|..+|+.+...|.+|.+||+.+.. ...+.+.. ..++++++++||+|.+++|-....+.++. ++.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~--~~~~~~~~-~~~l~ell~~sDivslh~Plt~~T~~li~--~~~ 216 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKRE--DLKEKGCV-YTSLDELLKESDVISLHVPYTKETHHMIN--EER 216 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHTTCE-ECCHHHHHHHCSEEEECCCCCTTTTTCBC--HHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccch--hhhhcCce-ecCHHHHHhhCCEEEEcCCCChhhccCcC--HHH
Confidence 58999999999999999999999999999987643 23344554 45899999999999999998887777764 456
Q ss_pred hhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 227 VSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
+..+++|.++|+++-+..-....+.+.+.+
T Consensus 217 l~~mk~~a~lIN~aRG~iVde~aL~~aL~~ 246 (334)
T 3kb6_A 217 ISLMKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HhhcCCCeEEEecCccccccHHHHHHHHHh
Confidence 788999999999999888777888888876
No 175
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.44 E-value=1.7e-06 Score=98.95 Aligned_cols=172 Identities=13% Similarity=0.049 Sum_probs=124.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc---chHHHHHHhHHHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL---HFLNAFIQNLGIALDMAK 77 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~---f~l~l~~KDl~la~~~a~ 77 (988)
|++|.+.+++++.+.|++.++++.|+|++.+.++++.++ ++....+.| |....+.||+.++++.|+
T Consensus 205 l~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-----------ri~~~~~~pg~g~gg~c~~kD~~~l~~~a~ 273 (402)
T 1dlj_A 205 LFANTYLALRVAYFNELDTYAESRKLNSHMIIQGISYDD-----------RIGMHYNNPSFGYGGYSLPKDTKQLLANYN 273 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST-----------TTCSSSCCCCSSCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhccCC-----------CCCcCCCCCCCccCCccHHhhHHHHHHHhc
Confidence 478999999999999999999999999999999998665 111122344 567899999999998885
Q ss_pred hcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccch-
Q 001973 78 TLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLGA- 156 (988)
Q Consensus 78 ~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G~- 156 (988)
|+++|+.+++.+.-+..... +++.+.+..+.. ..+..+|+|+|+-.
T Consensus 274 --~~~~~l~~~~~~~N~~~~~~---------~~~~~~~~~~~~----------------------~~~~~~v~vlGlafK 320 (402)
T 1dlj_A 274 --NIPQTLIEAIVSSNNVRKSY---------IAKQIINVLKEQ----------------------ESPVKVVGVYRLIMK 320 (402)
T ss_dssp --TSSCSHHHHHHHHHHHHHHH---------HHHHHHHHHTTS----------------------CCSSCEEEEECCCSS
T ss_pred --CCChHHHHHHHHHHHHhHHH---------HHHHHHHHhhhc----------------------CCCCCEEEEEeeecc
Confidence 89999999998877755432 333333322210 00124788888753
Q ss_pred ---------HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHH
Q 001973 157 ---------MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 157 ---------mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~v 219 (988)
=...++..|.+.|.+|.+||..-+.... ..+...+.++.++++++|+|++.+.++. .+++
T Consensus 321 ~~~~d~R~sp~~~i~~~L~~~g~~v~~~DP~~~~~~~--~~~~~~~~~~~~~~~~~d~~v~~~~h~~-~~~~ 389 (402)
T 1dlj_A 321 SNSDNFRESAIKDVIDILKSKDIKIIIYEPMLNKLES--EDQSVLVNDLENFKKQANIIVTNRYDNE-LQDV 389 (402)
T ss_dssp TTCSCCTTCHHHHHHHHHHTSSCEEEEECTTCSCCCT--TCCSEECCCHHHHHHHCSEEECSSCCGG-GGGG
T ss_pred CCCcccccChHHHHHHHHHHCCCEEEEECCCCChHHH--HcCCeecCCHHHHHhCCcEEEEecCChH-HHHH
Confidence 4678999999999999999985332111 1244557789999999999999887764 4444
No 176
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=98.43 E-value=4.5e-07 Score=100.50 Aligned_cols=93 Identities=16% Similarity=0.159 Sum_probs=69.2
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHH----hc--------CCcccCCHHHHhccCcEEEEEcC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQ----NV--------GGLIANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~----~~--------G~~~~~s~~e~~~~aDvV~l~vp 211 (988)
+.|||+|||+|.||+++|..|+.+|+ +|++||+++++++... .. .+..+++. +++++||+||++++
T Consensus 3 ~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg 81 (317)
T 2ewd_A 3 ERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS 81 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 35799999999999999999999999 9999999988776531 10 12334666 78899999999994
Q ss_pred Ch---------------HHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 212 NE---------------AQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 212 ~~---------------~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
.+ ...++++ +.+.+.. ++.+++..|+.
T Consensus 82 ~p~~~g~~r~d~~~~~~~i~~~i~---~~i~~~~-~~~iii~~sNp 123 (317)
T 2ewd_A 82 IPGRPKDDRSELLFGNARILDSVA---EGVKKYC-PNAFVICITNP 123 (317)
T ss_dssp CSSCCSSCGGGGHHHHHHHHHHHH---HHHHHHC-TTSEEEECCSS
T ss_pred CCCCCCCcHHHHHHhhHHHHHHHH---HHHHHHC-CCcEEEEeCCh
Confidence 32 2345555 4555654 57888877763
No 177
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.42 E-value=4e-07 Score=99.72 Aligned_cols=92 Identities=16% Similarity=0.169 Sum_probs=75.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCccc--CCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIA--NSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~--~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
.++|+|||+|.||..+|+.|...|.+|++|||++++.+.+.+.|+... .++.++++++|+|++++|... +.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~-----i~-- 227 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALV-----VT-- 227 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCC-----BC--
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHH-----hC--
Confidence 469999999999999999999999999999999988777776676543 567888999999999999632 11
Q ss_pred cchhhhCCCCCEEEecCCCCH
Q 001973 224 LGAVSALSSGASIILSSTVSP 244 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~~p 244 (988)
+.....++++.++||++....
T Consensus 228 ~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 228 ANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp HHHHHHSCTTCEEEECSSTTC
T ss_pred HHHHHhcCCCCEEEEecCCCC
Confidence 233456889999999997543
No 178
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.41 E-value=7.6e-07 Score=82.71 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=75.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCC-CeEEEEeCChhHHHHHHhcCCcc----c---CCHHHHhccCcEEEEEcCChHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSN-FTVIGYDVYRPTLTKFQNVGGLI----A---NSPAEAAKDVGVLVIMVTNEAQAE 217 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~G~~~----~---~s~~e~~~~aDvV~l~vp~~~~~~ 217 (988)
+++|.|+|+|.||..++..|.+.| ++|+++||++++.+.+...+... . ++..++++++|+||.|+|... ..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~-~~ 83 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL-TP 83 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG-HH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh-hH
Confidence 368999999999999999999999 99999999999998887655432 1 234456778999999998654 23
Q ss_pred HHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHH
Q 001973 218 SVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQ 255 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~ 255 (988)
.+. + .....|..++|.++. +...+.+.+...
T Consensus 84 ~~~---~---~~~~~g~~~~~~~~~-~~~~~~~~~~~~ 114 (118)
T 3ic5_A 84 IIA---K---AAKAAGAHYFDLTED-VAATNAVRALVE 114 (118)
T ss_dssp HHH---H---HHHHTTCEEECCCSC-HHHHHHHHHHHH
T ss_pred HHH---H---HHHHhCCCEEEecCc-HHHHHHHHHHHH
Confidence 333 1 123457788888765 556666665543
No 179
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.40 E-value=6.6e-07 Score=90.64 Aligned_cols=111 Identities=13% Similarity=0.194 Sum_probs=78.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhC-CCeEEEEeCChhHHHHHHhcCCccc----CCH---HHH--hccCcEEEEEcCChHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS-NFTVIGYDVYRPTLTKFQNVGGLIA----NSP---AEA--AKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~G~~~~----~s~---~e~--~~~aDvV~l~vp~~~~ 215 (988)
.++|.|+|+|.||..++..|.+. |++|+++|+++++.+.+.+.|.... ++. .++ ++++|+||+++|++..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~ 118 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQG 118 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHH
Confidence 35899999999999999999999 9999999999999999988886532 222 233 5679999999999876
Q ss_pred HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCc
Q 001973 216 AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAP 267 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldap 267 (988)
...++ .....+.+...++.. +..+.....+ .+ .|..++..|
T Consensus 119 ~~~~~----~~~~~~~~~~~ii~~-~~~~~~~~~l----~~--~G~~~vi~p 159 (183)
T 3c85_A 119 NQTAL----EQLQRRNYKGQIAAI-AEYPDQLEGL----LE--SGVDAAFNI 159 (183)
T ss_dssp HHHHH----HHHHHTTCCSEEEEE-ESSHHHHHHH----HH--HTCSEEEEH
T ss_pred HHHHH----HHHHHHCCCCEEEEE-ECCHHHHHHH----HH--cCCCEEEch
Confidence 65555 234445544444433 4456655433 33 245555444
No 180
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.40 E-value=1.3e-06 Score=96.45 Aligned_cols=106 Identities=15% Similarity=0.147 Sum_probs=82.8
Q ss_pred CCCeEEEEccchHHHH-HHHHHHh-CCCeEE-EEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFG-MATHLLR-SNFTVI-GYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~-lA~~L~~-~G~~V~-v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
+++||||||+|.||.. ++..|.+ .++++. ++|+++++.+.+.+. |+...++++++++++|+|++|+|+....+.+.
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~ 84 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEIIK 84 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHHH
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHH
Confidence 4579999999999996 8998987 467766 799999999887754 77778999999999999999999987665544
Q ss_pred ccccchhhhCCCCC-EEEe-cCCCCHHHHHHHHHHHHhc
Q 001973 221 YGDLGAVSALSSGA-SIIL-SSTVSPGFVSQLERRLQFE 257 (988)
Q Consensus 221 ~~~~~i~~~l~~g~-ivId-~st~~p~~~~~l~~~l~~~ 257 (988)
.. +..|+ +++. -.+..+..++++.+...+.
T Consensus 85 ----~a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~ 116 (308)
T 3uuw_A 85 ----IL---LNLGVHVYVDKPLASTVSQGEELIELSTKK 116 (308)
T ss_dssp ----HH---HHTTCEEEECSSSSSSHHHHHHHHHHHHHH
T ss_pred ----HH---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHc
Confidence 22 23343 5554 2567788999988877763
No 181
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.37 E-value=1.3e-06 Score=98.42 Aligned_cols=110 Identities=10% Similarity=0.093 Sum_probs=84.6
Q ss_pred hcCCCCCeEEEEccchHHHHHHHHHHhC--CCeEE-EEeCChhHHHHHHhc-CCcccCCHHHHhc--cCcEEEEEcCChH
Q 001973 141 AKSNSVTRVGFIGLGAMGFGMATHLLRS--NFTVI-GYDVYRPTLTKFQNV-GGLIANSPAEAAK--DVGVLVIMVTNEA 214 (988)
Q Consensus 141 m~~~~~~kIgiIG~G~mG~~lA~~L~~~--G~~V~-v~dr~~~~~~~l~~~-G~~~~~s~~e~~~--~aDvV~l~vp~~~ 214 (988)
|+.++++||||||+|.||..++..|.+. ++++. ++|+++++.+.+.+. |+...+|++++++ ++|+|++|+|+..
T Consensus 8 m~~~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~ 87 (354)
T 3q2i_A 8 PITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGL 87 (354)
T ss_dssp CCCSSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGG
T ss_pred cCCCCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHH
Confidence 3444567999999999999999999987 67754 899999999887654 8888899999987 7999999999987
Q ss_pred HHHHHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHhc
Q 001973 215 QAESVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 215 ~~~~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
..+.+. . .+..| ++++..- +..+..++++.+...+.
T Consensus 88 h~~~~~----~---al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~ 125 (354)
T 3q2i_A 88 HPTQSI----E---CSEAGFHVMTEKPMATRWEDGLEMVKAADKA 125 (354)
T ss_dssp HHHHHH----H---HHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHHHH----H---HHHCCCCEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 655543 2 22334 4455443 66788888888877663
No 182
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.35 E-value=1.9e-06 Score=96.58 Aligned_cols=106 Identities=15% Similarity=0.235 Sum_probs=84.1
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhc-CCcccCCHHHHhc--cCcEEEEEcCChHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS-NFTVI-GYDVYRPTLTKFQNV-GGLIANSPAEAAK--DVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~-G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~v 219 (988)
+++||||||+|.||..++..|.+. +++|. ++|+++++.+.+.+. |....++++++++ ++|+|++|+|+....+.+
T Consensus 3 ~~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 82 (344)
T 3euw_A 3 LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLI 82 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHH
T ss_pred CceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHH
Confidence 346999999999999999999986 67765 799999999887654 7788899999998 899999999998766655
Q ss_pred HccccchhhhCCCCCEEEecC-CCCHHHHHHHHHHHHh
Q 001973 220 LYGDLGAVSALSSGASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
. ..++. ..++++... +..+..++++.+...+
T Consensus 83 ~----~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~ 114 (344)
T 3euw_A 83 T----RAVER--GIPALCEKPIDLDIEMVRACKEKIGD 114 (344)
T ss_dssp H----HHHHT--TCCEEECSCSCSCHHHHHHHHHHHGG
T ss_pred H----HHHHc--CCcEEEECCCCCCHHHHHHHHHHHHh
Confidence 4 22221 235777654 7788899998887766
No 183
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=98.34 E-value=1.9e-06 Score=95.53 Aligned_cols=105 Identities=15% Similarity=0.148 Sum_probs=80.0
Q ss_pred CCCeEEEEccchHHHH-HHHHHHh-CCCeEE-EEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFG-MATHLLR-SNFTVI-GYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~-lA~~L~~-~G~~V~-v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
+++||||||+|.||.. ++..|.+ .++++. ++|+++++.+.+.+. |+...++.+++..++|+|++|+|+....+.+.
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~ 83 (319)
T 1tlt_A 4 KKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVS 83 (319)
T ss_dssp -CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHHHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHHHH
Confidence 4579999999999996 8888876 467865 899999998887654 77777888877678999999999877655543
Q ss_pred ccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHh
Q 001973 221 YGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 221 ~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~ 256 (988)
..+..|+ ++++. .+..+...+++.+...+
T Consensus 84 -------~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~ 114 (319)
T 1tlt_A 84 -------TLLNAGVHVCVDKPLAENLRDAERLVELAAR 114 (319)
T ss_dssp -------HHHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred -------HHHHcCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 2233454 66664 46678888888887766
No 184
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.33 E-value=1.7e-06 Score=96.17 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=72.9
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHH----h----c----CCcccCCHHHHhccCcEEEEEcC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQ----N----V----GGLIANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~----~----~----G~~~~~s~~e~~~~aDvV~l~vp 211 (988)
++|||+|||+|.||+++|..|+..|+ +|++||+++++++... + . .+..++++++++++||+||+++.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g 87 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG 87 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence 45799999999999999999999998 9999999998776521 1 1 12336788888999999999983
Q ss_pred ChH--------------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHH
Q 001973 212 NEA--------------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLER 252 (988)
Q Consensus 212 ~~~--------------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~ 252 (988)
.+. .++++. +.+.+.. ++.+++.. |++.+..-.+..
T Consensus 88 ~p~~~g~~~~~~~r~dl~~~n~~i~~~i~---~~i~~~~-p~a~vi~~-tNP~~~~t~~~~ 143 (331)
T 1pzg_A 88 LTKVPGKPDSEWSRNDLLPFNSKIIREIG---QNIKKYC-PKTFIIVV-TNPLDCMVKVMC 143 (331)
T ss_dssp CSSCTTCCGGGCCGGGGHHHHHHHHHHHH---HHHHHHC-TTCEEEEC-CSSHHHHHHHHH
T ss_pred CCCCCCcccCCCCHHHHHHHHHHHHHHHH---HHHHHHC-CCcEEEEE-cCchHHHHHHHH
Confidence 221 134444 4555554 56666654 555665544443
No 185
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.33 E-value=2.5e-06 Score=82.30 Aligned_cols=93 Identities=17% Similarity=0.184 Sum_probs=66.2
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc----cCCHHHH----hccCcEEEEEcCChHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI----ANSPAEA----AKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~----~~s~~e~----~~~aDvV~l~vp~~~~~ 216 (988)
++++|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+.+.|..+ .++.... +.++|+||+++|+...-
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 346899999999999999999999999999999999999998877642 1222221 35789999999976533
Q ss_pred HHHHccccchhhhCCCCCEEEecCC
Q 001973 217 ESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
..+. .....+....+++-.++
T Consensus 85 ~~~~----~~a~~~~~~~iia~~~~ 105 (141)
T 3llv_A 85 LKIL----KALRSVSDVYAIVRVSS 105 (141)
T ss_dssp HHHH----HHHHHHCCCCEEEEESC
T ss_pred HHHH----HHHHHhCCceEEEEEcC
Confidence 3332 22333334556554443
No 186
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.32 E-value=3.9e-07 Score=98.08 Aligned_cols=99 Identities=9% Similarity=0.021 Sum_probs=81.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhc
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTL 79 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~ 79 (988)
+++|++++.++.+++|++.++++.|+|++ +++.++.+.+.+++. +.+.+.+++|.+ |+ ..||++++.+++++.
T Consensus 160 l~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~g~~~~~--~~~~~~~~~~~~g~~---~~~~~~~~~~~a~~~ 233 (264)
T 1i36_A 160 MLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTEGNDFRE--SAISRLKSSCIHARR---RYEEMKEVQDMLAEV 233 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTSCSSTHH--HHHHHHHHHHHTHHH---HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhcCccHHH--HHHHHhcCCCCcchh---hHHHHHHHHHHHHHh
Confidence 47899999999999999999999999998 779998877656643 456788888888 76 689999999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhCcCCCCCc
Q 001973 80 AFPLPLLAVAHQQLILGLSHAHANDDN 106 (988)
Q Consensus 80 g~~~p~~~~~~~~~~~a~~~G~g~~D~ 106 (988)
+++|+.+.+.+.|+++.+.|++.+|-
T Consensus 234 -v~~p~~~~v~~~~~~~~~~~~~~~~~ 259 (264)
T 1i36_A 234 -IDPVMPTCIIRIFDKLKDVKVSADAR 259 (264)
T ss_dssp -SCCSHHHHHHHHHHHHCC------GG
T ss_pred -cCchHHHHHHHHHHHHHHcCCChhhH
Confidence 99999999999999999988876654
No 187
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=98.31 E-value=2.4e-06 Score=95.20 Aligned_cols=134 Identities=17% Similarity=0.095 Sum_probs=96.9
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEEcCChHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS-NFTVI-GYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIMVTNEAQAES 218 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~vp~~~~~~~ 218 (988)
+++||||||+|.||..++..|.+. +++|. ++|+++++.+.+.+. |+ ...++++++++ ++|+|++|+|+....+.
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 83 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSA 83 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHH
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHH
Confidence 457999999999999999999985 56765 789999998887654 66 57889999987 79999999999876655
Q ss_pred HHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHH
Q 001973 219 VLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGS 296 (988)
Q Consensus 219 vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ 296 (988)
+. .. +..| ++++... +..+..++++.+...+ .+..+..+... --...+..+++
T Consensus 84 ~~----~a---l~~gk~vl~EKP~~~~~~e~~~l~~~a~~--~g~~~~v~~~~----------------r~~p~~~~~k~ 138 (330)
T 3e9m_A 84 AK----LA---LSQGKPVLLEKPFTLNAAEAEELFAIAQE--QGVFLMEAQKS----------------VFLPITQKVKA 138 (330)
T ss_dssp HH----HH---HHTTCCEEECSSCCSSHHHHHHHHHHHHH--TTCCEEECCSG----------------GGCHHHHHHHH
T ss_pred HH----HH---HHCCCeEEEeCCCCCCHHHHHHHHHHHHH--cCCeEEEEEhh----------------hhCHHHHHHHH
Confidence 54 22 2233 5777665 7788899999887776 34433322110 11235677888
Q ss_pred HHH--hcCC
Q 001973 297 VLS--ALSE 303 (988)
Q Consensus 297 ll~--~~g~ 303 (988)
+++ .+|.
T Consensus 139 ~i~~g~iG~ 147 (330)
T 3e9m_A 139 TIQEGGLGE 147 (330)
T ss_dssp HHHTTTTCS
T ss_pred HHhCCCCCC
Confidence 887 4665
No 188
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=98.29 E-value=2.8e-06 Score=95.82 Aligned_cols=107 Identities=19% Similarity=0.167 Sum_probs=83.7
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHHHHH
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRS-NFTVI-GYDVYRPTLTKFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~v 219 (988)
|+++||||||+|.||...+..|.+. +++|. ++|+++++.+...+.|+...+|++++++ +.|+|++|+|+....+.+
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELA 82 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHH
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 3457999999999999999999887 67764 7899999988776778888999999987 789999999998766555
Q ss_pred HccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHhc
Q 001973 220 LYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQFE 257 (988)
Q Consensus 220 l~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~~ 257 (988)
. ..+..|+ +++.. -+..+..++++.+...+.
T Consensus 83 ~-------~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~ 115 (359)
T 3e18_A 83 I-------SALEAGKHVVCEKPVTMTSEDLLAIMDVAKRV 115 (359)
T ss_dssp H-------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred H-------HHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHh
Confidence 4 2233444 55554 366788888888877663
No 189
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=98.29 E-value=2.9e-06 Score=95.53 Aligned_cols=106 Identities=21% Similarity=0.262 Sum_probs=83.5
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC-CCeE-EEEeCChhHHHHHHhc-CCcccCCHHHHh--ccCcEEEEEcCChHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS-NFTV-IGYDVYRPTLTKFQNV-GGLIANSPAEAA--KDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~-G~~~~~s~~e~~--~~aDvV~l~vp~~~~~~~v 219 (988)
+++||||||+|.||..++..|.+. +++| .++|+++++.+.+.+. |+...+++++++ .+.|+|++|+|+....+.+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 83 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVI 83 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHH
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 347999999999999999999987 7785 4889999999887654 888889999999 5689999999998766555
Q ss_pred HccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHhc
Q 001973 220 LYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 220 l~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
. . .+..| ++++..- +..+..++++.+...+.
T Consensus 84 ~----~---al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~ 116 (354)
T 3db2_A 84 E----Q---CARSGKHIYVEKPISVSLDHAQRIDQVIKET 116 (354)
T ss_dssp H----H---HHHTTCEEEEESSSCSSHHHHHHHHHHHHHH
T ss_pred H----H---HHHcCCEEEEccCCCCCHHHHHHHHHHHHHc
Confidence 4 2 22334 4666654 67788999998877763
No 190
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=98.29 E-value=3.3e-06 Score=93.73 Aligned_cols=100 Identities=16% Similarity=0.107 Sum_probs=70.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHH----hc--------CCcccCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQ----NV--------GGLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~----~~--------G~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
++||+|||+|.||+++|..|+.+|+ +|++||+++++++... +. .+..+++. +++++||+||++++.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg~ 92 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAGV 92 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCCC
Confidence 3699999999999999999999999 9999999998776421 10 13344677 788999999999944
Q ss_pred hH---------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHH
Q 001973 213 EA---------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLE 251 (988)
Q Consensus 213 ~~---------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~ 251 (988)
+. .++++. +.+.+.. ++.+++..|+ +.+..-.+.
T Consensus 93 p~k~g~tr~dl~~~n~~i~~~i~---~~i~~~~-p~a~viv~tN-P~~~~t~~~ 141 (328)
T 2hjr_A 93 PRKPNMTRSDLLTVNAKIVGSVA---ENVGKYC-PNAFVICITN-PLDAMVYYF 141 (328)
T ss_dssp CCCTTCCSGGGHHHHHHHHHHHH---HHHHHHC-TTCEEEECCS-SHHHHHHHH
T ss_pred CCCCCCchhhHHhhhHHHHHHHH---HHHHHHC-CCeEEEEecC-chHHHHHHH
Confidence 32 234444 4555555 6667666544 444433333
No 191
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.27 E-value=7.7e-06 Score=78.95 Aligned_cols=98 Identities=15% Similarity=0.207 Sum_probs=70.3
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCccc----CCHH---H-HhccCcEEEEEcCChHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIA----NSPA---E-AAKDVGVLVIMVTNEAQAES 218 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~----~s~~---e-~~~~aDvV~l~vp~~~~~~~ 218 (988)
.+|.|+|+|.+|..++..|.+.|++|+++|+++++++.+.+.|.... ++.. + -+.++|++++++|++.....
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~ 87 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGE 87 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHH
Confidence 58999999999999999999999999999999999999998887531 2222 1 14689999999999875544
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHH
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQ 249 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~ 249 (988)
++ .....+.++..+|-.. ..+.....
T Consensus 88 ~~----~~a~~~~~~~~iiar~-~~~~~~~~ 113 (140)
T 3fwz_A 88 IV----ASARAKNPDIEIIARA-HYDDEVAY 113 (140)
T ss_dssp HH----HHHHHHCSSSEEEEEE-SSHHHHHH
T ss_pred HH----HHHHHHCCCCeEEEEE-CCHHHHHH
Confidence 44 2233344444444333 34555433
No 192
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=98.26 E-value=1.2e-06 Score=97.02 Aligned_cols=110 Identities=25% Similarity=0.291 Sum_probs=83.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHh--CCCeEEEEeCChhHHHHHHhc------CCcccCCHHHHhccCcEEEEEcCChHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLR--SNFTVIGYDVYRPTLTKFQNV------GGLIANSPAEAAKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~--~G~~V~v~dr~~~~~~~l~~~------G~~~~~s~~e~~~~aDvV~l~vp~~~~~ 216 (988)
..++|+|||+|.||..++..|.+ ...+|.+|||++++.+++.+. .+. ++++++++ ++|+|++|+|+..
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~-- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK-- 199 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS--
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC--
Confidence 45699999999999999999987 347899999999999888753 234 78899999 9999999999753
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCc
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAP 267 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldap 267 (988)
.++. ...+++|+.|++.++..|. .+++...+.. ++..|+|.+
T Consensus 200 -pv~~-----~~~l~~G~~V~~ig~~~p~-~~el~~~~~~--~a~v~vD~~ 241 (322)
T 1omo_A 200 -PVVK-----AEWVEEGTHINAIGADGPG-KQELDVEILK--KAKIVVDDL 241 (322)
T ss_dssp -CCBC-----GGGCCTTCEEEECSCCSTT-CCCBCHHHHH--TEEEEESCH
T ss_pred -ceec-----HHHcCCCeEEEECCCCCCC-ccccCHHHHh--cCeEEECCH
Confidence 2221 2467899999999888887 4455444433 234677753
No 193
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.25 E-value=2.6e-06 Score=94.29 Aligned_cols=99 Identities=17% Similarity=0.192 Sum_probs=69.7
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHHHHh---c------CCcc-cCCHHHHhccCcEEEEEcCChH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTKFQN---V------GGLI-ANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~---~------G~~~-~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
|||+|||+|.||+++|..|+.+|+ +|++||+++++++.+.. . ...+ .++ .+++++||+||+++|.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d-~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD-YADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC-GGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCC-HHHhCCCCEEEEccCCCC
Confidence 589999999999999999999999 99999999988776542 1 1122 234 466889999999999743
Q ss_pred ---------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHH
Q 001973 215 ---------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLE 251 (988)
Q Consensus 215 ---------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~ 251 (988)
.++++. +.+.+.. ++.+++.. |.+.+....+.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~---~~i~~~~-~~~~ii~~-tNp~~~~~~~~ 126 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVMKEIA---RNVSKYA-PDSIVIVV-TNPVDVLTYFF 126 (319)
T ss_dssp CSSCCHHHHHHHHHHHHHHHH---HHHHHHC-TTCEEEEC-SSSHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH---HHHHhhC-CCeEEEEe-CCcHHHHHHHH
Confidence 134444 4555554 56666665 44455543443
No 194
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.24 E-value=3.7e-06 Score=94.42 Aligned_cols=106 Identities=18% Similarity=0.126 Sum_probs=82.8
Q ss_pred CCCCeEEEEccchHHH-HHHHHHHhC-CCeEE-EEeCChhHHHHHHhc-CCcccCCHHHHhc--cCcEEEEEcCChHHHH
Q 001973 144 NSVTRVGFIGLGAMGF-GMATHLLRS-NFTVI-GYDVYRPTLTKFQNV-GGLIANSPAEAAK--DVGVLVIMVTNEAQAE 217 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~-~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~-G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~ 217 (988)
|+++||||||+|.||. .++..|.+. +++|. ++|+++++.+.+.+. |+...++++++++ +.|+|++|+|+....+
T Consensus 25 m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 104 (350)
T 3rc1_A 25 ANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAE 104 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHH
T ss_pred CCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 3457999999999998 799999887 67765 889999999887654 8887899999986 5899999999987666
Q ss_pred HHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 218 SVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
.+. . .+..| .+++..- +..+..++++.+...+
T Consensus 105 ~~~----~---al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~ 138 (350)
T 3rc1_A 105 WID----R---ALRAGKHVLAEKPLTTDRPQAERLFAVARE 138 (350)
T ss_dssp HHH----H---HHHTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred HHH----H---HHHCCCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 554 2 22334 4566653 6778899999887776
No 195
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.24 E-value=4.8e-06 Score=92.75 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=82.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhc-CCcccCCHHHHhc--cCcEEEEEcCChHHHHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS-NFTVI-GYDVYRPTLTKFQNV-GGLIANSPAEAAK--DVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~-G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~vl 220 (988)
++||||||+|.||..++..|.+. +++|. ++|+++++.+.+.+. |+. .++++++++ ++|+|++|+|+....+.+.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 81 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADLIE 81 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHHHH
Confidence 36999999999999999999985 67866 799999998887654 777 899999988 7999999999987666554
Q ss_pred ccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 221 YGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 221 ~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
.. +..| ++++..- +..+..++++.+...+
T Consensus 82 ----~a---l~~gk~v~~EKP~~~~~~~~~~l~~~a~~ 112 (331)
T 4hkt_A 82 ----RF---ARAGKAIFCEKPIDLDAERVRACLKVVSD 112 (331)
T ss_dssp ----HH---HHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred ----HH---HHcCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 22 2234 4555543 7788999999888776
No 196
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.23 E-value=4.2e-06 Score=92.30 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=70.2
Q ss_pred CeEEEEccchHHHHHHHHHHhC--CCeEEEEeCChhHHHHHHh---cC---------CcccCCHHHHhccCcEEEEEcCC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRS--NFTVIGYDVYRPTLTKFQN---VG---------GLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~---~G---------~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
|||+|||+|.||+++|..|+.+ |++|++||+++++++.+.. .. +..++++++ +++||+||+++|.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~~ 79 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAGL 79 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCCC
Confidence 5999999999999999999985 7999999999988775431 11 233467766 8999999999986
Q ss_pred hH---------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHH
Q 001973 213 EA---------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLER 252 (988)
Q Consensus 213 ~~---------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~ 252 (988)
+. .++++. +.+.++. ++..++.. |++++....+..
T Consensus 80 p~~~g~~r~dl~~~n~~i~~~i~---~~i~~~~-~~~~viv~-tNP~~~~~~~~~ 129 (310)
T 1guz_A 80 PRKPGMTREDLLMKNAGIVKEVT---DNIMKHS-KNPIIIVV-SNPLDIMTHVAW 129 (310)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHH---HHHHHHC-SSCEEEEC-CSSHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHH---HHHHHhC-CCcEEEEE-cCchHHHHHHHH
Confidence 52 123333 3445554 55565555 556666544443
No 197
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.21 E-value=1.2e-06 Score=101.09 Aligned_cols=101 Identities=16% Similarity=0.061 Sum_probs=81.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..++|+|||+|.||..+|++|...|.+|++||+++.+..+....|... .++.++++++|+|++++.+.. ++. .
T Consensus 256 ~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~~l~ell~~aDiVi~~~~t~~----lI~--~ 328 (479)
T 1v8b_A 256 SGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VTLDEIVDKGDFFITCTGNVD----VIK--L 328 (479)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECCSSSS----SBC--H
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-cCHHHHHhcCCEEEECCChhh----hcC--H
Confidence 456999999999999999999999999999999998875566667754 589999999999999974432 221 2
Q ss_pred chhhhCCCCCEEEecCCCCHH-HHHHHHH
Q 001973 225 GAVSALSSGASIILSSTVSPG-FVSQLER 252 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~-~~~~l~~ 252 (988)
+.++.+++|.++||+++..++ ....+.+
T Consensus 329 ~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 329 EHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp HHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred HHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 445678999999999998873 6666665
No 198
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=98.19 E-value=7.2e-06 Score=90.74 Aligned_cols=102 Identities=17% Similarity=0.149 Sum_probs=70.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHH----Hh----c--C--CcccCCHHHHhccCcEEEEEcC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKF----QN----V--G--GLIANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l----~~----~--G--~~~~~s~~e~~~~aDvV~l~vp 211 (988)
.++||+|||+|.||+++|..|+..|+ +|.+||+++++++.. .. . . +..+++. +++++||+||++++
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 34799999999999999999999998 999999998876532 11 1 1 2334677 78999999999984
Q ss_pred ChH--------------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHH
Q 001973 212 NEA--------------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLER 252 (988)
Q Consensus 212 ~~~--------------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~ 252 (988)
.+. .++++. +.+.+.. ++.+++.. |++.+..-.+..
T Consensus 82 ~p~k~g~~~qe~~r~dl~~~n~~i~~~i~---~~i~~~~-p~a~iiv~-tNP~~~~t~~~~ 137 (322)
T 1t2d_A 82 FTKAPGKSDKEWNRDDLLPLNNKIMIEIG---GHIKKNC-PNAFIIVV-TNPVDVMVQLLH 137 (322)
T ss_dssp CSSCTTCCSTTCCGGGGHHHHHHHHHHHH---HHHHHHC-TTSEEEEC-SSSHHHHHHHHH
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHHH---HHHHHHC-CCeEEEEe-cCChHHHHHHHH
Confidence 331 244444 4455555 66666665 445555444433
No 199
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.19 E-value=1.4e-06 Score=97.37 Aligned_cols=94 Identities=15% Similarity=0.259 Sum_probs=74.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccC-------------------------CHHHHh
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIAN-------------------------SPAEAA 200 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~-------------------------s~~e~~ 200 (988)
..||+|||+|.||..+++.+...|.+|++||+++++.+.+.+.|..+.+ ++.+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~l 263 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDAI 263 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHHH
Confidence 3699999999999999999999999999999999999999888776533 456788
Q ss_pred ccCcEEEEEcCChHH-HHHHHccccchhhhCCCCCEEEecCC
Q 001973 201 KDVGVLVIMVTNEAQ-AESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 201 ~~aDvV~l~vp~~~~-~~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
+++|+||.++..+.. ...++ .++..+.+++|.+|||++.
T Consensus 264 ~~aDIVI~tv~iPg~~ap~Lv--t~emv~~MkpGsVIVDvA~ 303 (381)
T 3p2y_A 264 TKFDIVITTALVPGRPAPRLV--TAAAATGMQPGSVVVDLAG 303 (381)
T ss_dssp TTCSEEEECCCCTTSCCCCCB--CHHHHHTSCTTCEEEETTG
T ss_pred hcCCEEEECCCCCCcccceee--cHHHHhcCCCCcEEEEEeC
Confidence 999999998733321 11112 1456778899999999885
No 200
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.18 E-value=1.7e-06 Score=100.02 Aligned_cols=99 Identities=17% Similarity=0.072 Sum_probs=79.3
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..++|+|||+|.||..+|+.|...|.+|++||+++.+..+....|... .+++++++++|+|++++.+.. ++. .
T Consensus 276 ~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~l~ell~~aDiVi~~~~t~~----lI~--~ 348 (494)
T 3d64_A 276 AGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VTMEYAADKADIFVTATGNYH----VIN--H 348 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECSSSSC----SBC--H
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CCHHHHHhcCCEEEECCCccc----ccC--H
Confidence 356999999999999999999999999999999998765555567664 479999999999999985432 231 3
Q ss_pred chhhhCCCCCEEEecCCCCHH-HHHHH
Q 001973 225 GAVSALSSGASIILSSTVSPG-FVSQL 250 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~-~~~~l 250 (988)
+.++.+++|.++||+++.... ....+
T Consensus 349 ~~l~~MK~gAilINvgrg~veID~~aL 375 (494)
T 3d64_A 349 DHMKAMRHNAIVCNIGHFDSEIDVAST 375 (494)
T ss_dssp HHHHHCCTTEEEEECSSSSCSBCCGGG
T ss_pred HHHhhCCCCcEEEEcCCCcchhchHHH
Confidence 456778999999999998763 44444
No 201
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.18 E-value=1.2e-06 Score=98.72 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=80.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc------cCCHHHHhccCcEEEEEcCChHHHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI------ANSPAEAAKDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~------~~s~~e~~~~aDvV~l~vp~~~~~~~v 219 (988)
.+||+|||+|.||..++..|++. ++|+++||++++++++.+..... .+++.++++++|+||.|+|...... +
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~~-v 93 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFK-S 93 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHHH-H
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhHH-H
Confidence 46999999999999999999999 99999999999999887653211 2356678889999999999765432 3
Q ss_pred HccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEe
Q 001973 220 LYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLV 264 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~l 264 (988)
. ...+..|+.++|+|...+. ++++.+...+ .|+.++
T Consensus 94 ~------~a~l~~G~~~vD~s~~~~~-~~~l~~~Ak~--aG~~~l 129 (365)
T 2z2v_A 94 I------KAAIKSKVDMVDVSFMPEN-PLELRDEAEK--AQVTIV 129 (365)
T ss_dssp H------HHHHHTTCCEEECCCCSSC-GGGGHHHHHH--TTCEEE
T ss_pred H------HHHHHhCCeEEEccCCcHH-HHHHHHHHHH--cCCEEE
Confidence 2 2335578899999986443 4556666555 456655
No 202
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.18 E-value=1.4e-06 Score=95.45 Aligned_cols=113 Identities=10% Similarity=0.048 Sum_probs=81.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhc-CC---ccc--CCHHHHhccCcEEEEEcCChHHH--
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNV-GG---LIA--NSPAEAAKDVGVLVIMVTNEAQA-- 216 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~-G~---~~~--~s~~e~~~~aDvV~l~vp~~~~~-- 216 (988)
.++|.|||+|.||.+++..|++.|. +|++|||++++++++.+. +. ... +++.+.+.++|+||.|+|.+...
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~~~ 220 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHPRV 220 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSSCC
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCCCC
Confidence 3689999999999999999999998 999999999999888754 32 221 24566778999999999976421
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
+.+.. -...+.++.+++|+++. |..+. +.+...+ .|..++++
T Consensus 221 ~~~~i----~~~~l~~~~~v~D~~y~-P~~T~-ll~~A~~--~G~~~v~G 262 (297)
T 2egg_A 221 EVQPL----SLERLRPGVIVSDIIYN-PLETK-WLKEAKA--RGARVQNG 262 (297)
T ss_dssp SCCSS----CCTTCCTTCEEEECCCS-SSSCH-HHHHHHH--TTCEEECS
T ss_pred CCCCC----CHHHcCCCCEEEEcCCC-CCCCH-HHHHHHH--CcCEEECC
Confidence 10110 02346789999999995 55544 5555555 45666654
No 203
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=98.17 E-value=1.8e-06 Score=97.29 Aligned_cols=95 Identities=13% Similarity=0.171 Sum_probs=74.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccC-----------------------------CH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIAN-----------------------------SP 196 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~-----------------------------s~ 196 (988)
..||+|||+|.||..+++.+...|.+|++||+++++.+.+.+.|..+.. ++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 3699999999999999999999999999999999999888887765322 46
Q ss_pred HHHhccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCC
Q 001973 197 AEAAKDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 197 ~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
.++++++|+||.|+..+......+. .++....+++|.+|||++.
T Consensus 270 ~e~l~~aDVVI~tvlipg~~ap~Lv-t~emv~~Mk~GsVIVDvA~ 313 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPGRPAPRLV-TREMLDSMKPGSVVVDLAV 313 (405)
T ss_dssp HHHHHTCSEEEECCCCSSSCCCCCB-CHHHHTTSCTTCEEEETTG
T ss_pred HHHhcCCCEEEECCcCCCCCCCEEe-cHHHHhcCCCCCEEEEEeC
Confidence 7788999999999743321111111 1466778899999999985
No 204
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.16 E-value=2.9e-06 Score=96.03 Aligned_cols=92 Identities=13% Similarity=0.098 Sum_probs=76.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.++|+|||+|.+|..+|..|...|.+|++||+++.+.......|... .++.++++.+|+|+++..+.. ++. .+
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~-~sL~eal~~ADVVilt~gt~~----iI~--~e 283 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAAMEGYQV-LLVEDVVEEAHIFVTTTGNDD----IIT--SE 283 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCSC----SBC--TT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHHHhCCee-cCHHHHHhhCCEEEECCCCcC----ccC--HH
Confidence 46999999999999999999999999999999998877777778764 489999999999998765533 221 34
Q ss_pred hhhhCCCCCEEEecCCCCH
Q 001973 226 AVSALSSGASIILSSTVSP 244 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p 244 (988)
..+.+++|.+||+.+...+
T Consensus 284 ~l~~MK~gAIVINvgRg~v 302 (436)
T 3h9u_A 284 HFPRMRDDAIVCNIGHFDT 302 (436)
T ss_dssp TGGGCCTTEEEEECSSSGG
T ss_pred HHhhcCCCcEEEEeCCCCC
Confidence 5677899999999997665
No 205
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.16 E-value=8.5e-06 Score=90.49 Aligned_cols=131 Identities=16% Similarity=0.188 Sum_probs=93.1
Q ss_pred CeEEEEccchHHHHHHHHHHhC-CCeE-EEEeCChhHHHHHHhc-CC-cccCCHHHHh-ccCcEEEEEcCChHHHHHHHc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRS-NFTV-IGYDVYRPTLTKFQNV-GG-LIANSPAEAA-KDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~-G~-~~~~s~~e~~-~~aDvV~l~vp~~~~~~~vl~ 221 (988)
+||||||+|.||..++..|.+. ++++ .++|+++++.+.+.+. |. ...+++++++ .++|+|++|+|+....+.+.
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~- 80 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQAK- 80 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHHHHH-
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHHH-
Confidence 5999999999999999999886 4665 5899999998887664 53 5678999998 78999999999877554443
Q ss_pred cccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHH
Q 001973 222 GDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLS 299 (988)
Q Consensus 222 ~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~ 299 (988)
..+..|+ +++.. .+..+..++++.+...+ .|..+..+... .-...+..++++++
T Consensus 81 ------~al~~gk~V~~EKP~~~~~~~~~~l~~~a~~--~g~~~~~~~~~----------------r~~p~~~~~~~~i~ 136 (325)
T 2ho3_A 81 ------AALSAGKHVILEKPAVSQPQEWFDLIQTAEK--NNCFIFEAARN----------------YHEKAFTTIKNFLA 136 (325)
T ss_dssp ------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHH--TTCCEEEECTT----------------TTCHHHHHHHHHHT
T ss_pred ------HHHHcCCcEEEecCCcCCHHHHHHHHHHHHH--cCCEEEEEEhh----------------hcChHHHHHHHHhh
Confidence 2233454 66664 46678888888887766 33333222111 12235677788887
Q ss_pred hcCC
Q 001973 300 ALSE 303 (988)
Q Consensus 300 ~~g~ 303 (988)
. |.
T Consensus 137 ~-G~ 139 (325)
T 2ho3_A 137 D-XQ 139 (325)
T ss_dssp T-SC
T ss_pred h-cC
Confidence 6 54
No 206
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=98.16 E-value=9.5e-06 Score=90.31 Aligned_cols=103 Identities=17% Similarity=0.134 Sum_probs=79.1
Q ss_pred CeEEEEccchHHHHH-HHHHHhCCCeEE-EEeCChhHHHHHHhc-CCc-ccCCHHHHhc--cCcEEEEEcCChHHHHHHH
Q 001973 147 TRVGFIGLGAMGFGM-ATHLLRSNFTVI-GYDVYRPTLTKFQNV-GGL-IANSPAEAAK--DVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 147 ~kIgiIG~G~mG~~l-A~~L~~~G~~V~-v~dr~~~~~~~l~~~-G~~-~~~s~~e~~~--~aDvV~l~vp~~~~~~~vl 220 (988)
+||||||+|.||..+ +..|.+.++++. ++|+++++.+.+.+. |.. ..++++++++ ++|+|++|+|+....+.+.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 80 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL 80 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH
Confidence 489999999999998 888888778865 789999998887654 664 6789999886 4999999999877555443
Q ss_pred ccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHh
Q 001973 221 YGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 221 ~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~ 256 (988)
..+..|+ ++++. .+..+...+++.+...+
T Consensus 81 -------~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~ 111 (332)
T 2glx_A 81 -------AAIRAGKHVLCEKPLAMTLEDAREMVVAARE 111 (332)
T ss_dssp -------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHH
T ss_pred -------HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHH
Confidence 2233455 55554 46678888888887766
No 207
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=98.15 E-value=2.3e-06 Score=94.62 Aligned_cols=104 Identities=17% Similarity=0.160 Sum_probs=79.9
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC-CCe-EEEEeCChhHHHHHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS-NFT-VIGYDVYRPTLTKFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~-G~~-V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~vl 220 (988)
+++||||||+|.||..++..|.+. +++ |.++|+++++.+.+.+. +...++++++++ ++|+|++|+|+....+.+.
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 87 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPPG-CVIESDWRSVVSAPEVEAVIIATPPATHAEITL 87 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCTT-CEEESSTHHHHTCTTCCEEEEESCGGGHHHHHH
T ss_pred CcceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHhh-CcccCCHHHHhhCCCCCEEEEeCChHHHHHHHH
Confidence 346999999999999999999986 566 55899999988766555 566788999885 7999999999877555443
Q ss_pred ccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHh
Q 001973 221 YGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 221 ~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~ 256 (988)
..+..|+ ++++. .+..+..++++.+...+
T Consensus 88 -------~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~ 118 (315)
T 3c1a_A 88 -------AAIASGKAVLVEKPLTLDLAEAEAVAAAAKA 118 (315)
T ss_dssp -------HHHHTTCEEEEESSSCSCHHHHHHHHHHHHH
T ss_pred -------HHHHCCCcEEEcCCCcCCHHHHHHHHHHHHH
Confidence 2233454 66663 46678888888887766
No 208
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=98.14 E-value=1.2e-05 Score=90.01 Aligned_cols=106 Identities=17% Similarity=0.232 Sum_probs=80.0
Q ss_pred CCCCeEEEEccchHHHHHHHHHH-h-CCCe-EEEEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEEcCChHHH
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLL-R-SNFT-VIGYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIMVTNEAQA 216 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~-~-~G~~-V~v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~vp~~~~~ 216 (988)
++++||||||+|.||..++..|. + .+++ |.++|+++++.+.+.+. |. ...+++.++++ ++|+|++|+|+....
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~ 85 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHP 85 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHH
Confidence 34579999999999999999998 5 4677 56799999999887664 66 56789999886 699999999988765
Q ss_pred HHHHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHh
Q 001973 217 ESVLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~ 256 (988)
+.+. ..+..|+ ++++. .+..+..++++.+...+
T Consensus 86 ~~~~-------~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~ 120 (346)
T 3cea_A 86 EMTI-------YAMNAGLNVFCEKPLGLDFNEVDEMAKVIKS 120 (346)
T ss_dssp HHHH-------HHHHTTCEEEECSCCCSCHHHHHHHHHHHHT
T ss_pred HHHH-------HHHHCCCEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 5544 2233455 45543 35667788888776655
No 209
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.13 E-value=6e-06 Score=81.18 Aligned_cols=91 Identities=11% Similarity=0.139 Sum_probs=65.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHH-hcCCccc----CCH---HHH-hccCcEEEEEcCChHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQ-NVGGLIA----NSP---AEA-AKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~-~~G~~~~----~s~---~e~-~~~aDvV~l~vp~~~~~ 216 (988)
.++|.|+|+|.||..++..|.+.|++|+++|+++++.+.+. ..|.... .+. .++ +.++|+||+|++++...
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~~ 98 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDSTN 98 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHHH
Confidence 47999999999999999999999999999999999988776 5565321 122 222 56899999999997755
Q ss_pred HHHHccccchhhhCCCCCEEEecC
Q 001973 217 ESVLYGDLGAVSALSSGASIILSS 240 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~s 240 (988)
..+. .+...+.+...++-.+
T Consensus 99 ~~~~----~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 99 FFIS----MNARYMFNVENVIARV 118 (155)
T ss_dssp HHHH----HHHHHTSCCSEEEEEC
T ss_pred HHHH----HHHHHHCCCCeEEEEE
Confidence 5443 3344433434444333
No 210
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=98.13 E-value=7.5e-06 Score=90.86 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=76.4
Q ss_pred CeEEEEccchHHH-HHHHHHHhC-CCeEEEEeCChhHHHHHHhc-CCcc-cCCHHHHh-ccCcEEEEEcCChHHHHHHHc
Q 001973 147 TRVGFIGLGAMGF-GMATHLLRS-NFTVIGYDVYRPTLTKFQNV-GGLI-ANSPAEAA-KDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 147 ~kIgiIG~G~mG~-~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~-G~~~-~~s~~e~~-~~aDvV~l~vp~~~~~~~vl~ 221 (988)
+||||||+|.||. .++..|.+. +++|.++|+++++.+++.+. |+.. ..+..+.+ .++|+|++|+|+....+.+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~- 81 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAA- 81 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHH-
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHHHHH-
Confidence 6999999999998 599999875 67877999999999887654 6653 44444555 68999999999876555443
Q ss_pred cccchhhhCCCC-CEEEec-CCCCHHHHHHHHHHHHh
Q 001973 222 GDLGAVSALSSG-ASIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 222 ~~~~i~~~l~~g-~ivId~-st~~p~~~~~l~~~l~~ 256 (988)
. .+..| .++++. .+.++...+++.+...+
T Consensus 82 ---~---al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~ 112 (323)
T 1xea_A 82 ---F---FLHLGIPTFVDKPLAASAQECENLYELAEK 112 (323)
T ss_dssp ---H---HHHTTCCEEEESCSCSSHHHHHHHHHHHHH
T ss_pred ---H---HHHCCCeEEEeCCCcCCHHHHHHHHHHHHh
Confidence 1 23344 466764 46678888888887766
No 211
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=98.12 E-value=5.9e-06 Score=90.81 Aligned_cols=102 Identities=13% Similarity=0.106 Sum_probs=67.9
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhcCCcc--cCCHHHHhccCcEEEEEcCChHHHHHH
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRS-NFTVI-GYDVYRPTLTKFQNVGGLI--ANSPAEAAKDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~G~~~--~~s~~e~~~~aDvV~l~vp~~~~~~~v 219 (988)
|+++||||||+|.||..++..|.+. ++++. ++|+++++.+. .|+.. .+++.+. .++|+|++|+|+....+.+
T Consensus 7 M~~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~---~g~~~~~~~~l~~~-~~~DvViiatp~~~h~~~~ 82 (304)
T 3bio_A 7 DKKIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF---ELQPFRVVSDIEQL-ESVDVALVCSPSREVERTA 82 (304)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC----------CCTTSCEESSGGGS-SSCCEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH---cCCCcCCHHHHHhC-CCCCEEEECCCchhhHHHH
Confidence 3457999999999999999999874 57876 79999988765 56542 3444444 6899999999987765544
Q ss_pred HccccchhhhCCCCCEEEecCCC---CHHHHHHHHHHHHh
Q 001973 220 LYGDLGAVSALSSGASIILSSTV---SPGFVSQLERRLQF 256 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~st~---~p~~~~~l~~~l~~ 256 (988)
. ..+..|+-+++.+.. .+...+++.+...+
T Consensus 83 ~-------~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~ 115 (304)
T 3bio_A 83 L-------EILKKGICTADSFDIHDGILALRRSLGDAAGK 115 (304)
T ss_dssp H-------HHHTTTCEEEECCCCGGGHHHHHHHHHHHHHH
T ss_pred H-------HHHHcCCeEEECCCCCCCCHHHHHHHHHHHHh
Confidence 3 345568888877543 45566677666655
No 212
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.11 E-value=8.6e-06 Score=91.21 Aligned_cols=104 Identities=18% Similarity=0.239 Sum_probs=81.4
Q ss_pred CeEEEEccchHHHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEEcCChHHHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRS-NFTVI-GYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~vp~~~~~~~vl 220 (988)
+||||||+|.||..++..|.+. ++++. ++|+++++.+.+.+. |+ ...+|+.++++ ++|+|++|+|+....+.+.
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~ 82 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSELVI 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHHHHH
Confidence 6999999999999999999885 56765 789999998887654 65 47889999988 7999999999987655544
Q ss_pred ccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHhc
Q 001973 221 YGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 221 ~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
. .+..| ++++..- +..+..++++.+...+.
T Consensus 83 ----~---al~~gk~v~~EKP~~~~~~e~~~l~~~a~~~ 114 (344)
T 3ezy_A 83 ----A---CAKAKKHVFCEKPLSLNLADVDRMIEETKKA 114 (344)
T ss_dssp ----H---HHHTTCEEEEESCSCSCHHHHHHHHHHHHHH
T ss_pred ----H---HHhcCCeEEEECCCCCCHHHHHHHHHHHHHh
Confidence 2 22334 4666654 77889999998877763
No 213
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.09 E-value=4e-06 Score=80.65 Aligned_cols=68 Identities=13% Similarity=0.292 Sum_probs=54.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCccc----CCHH---HH-hccCcEEEEEcCCh
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIA----NSPA---EA-AKDVGVLVIMVTNE 213 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~----~s~~---e~-~~~aDvV~l~vp~~ 213 (988)
+++|.|+|+|.+|..++..|.+.|++|+++|+++++.+.+.+.+.... .+.. ++ ..++|+|+.+++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 457999999999999999999999999999999998887766554321 2222 22 56799999999975
No 214
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=98.09 E-value=1.1e-05 Score=90.12 Aligned_cols=105 Identities=17% Similarity=0.206 Sum_probs=82.2
Q ss_pred CCCeEEEEccchHHH-HHHHHHHhCCCeE-EEEeCChhHHHHHHhc--CCcccCCHHHHhc--cCcEEEEEcCChHHHHH
Q 001973 145 SVTRVGFIGLGAMGF-GMATHLLRSNFTV-IGYDVYRPTLTKFQNV--GGLIANSPAEAAK--DVGVLVIMVTNEAQAES 218 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~-~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~--G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~ 218 (988)
+++||||||+|.||. .++..|...+++| .++|+++++.+.+.+. +....+|++++++ +.|+|++|+|+....+.
T Consensus 3 ~~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 82 (336)
T 2p2s_A 3 KKIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAEL 82 (336)
T ss_dssp -CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHHH
T ss_pred CccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHHH
Confidence 347999999999996 6888887778885 6899999998887765 5677899999987 68999999999876665
Q ss_pred HHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHh
Q 001973 219 VLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~ 256 (988)
+. ..+..|+ ++++. .+..+..++++.+...+
T Consensus 83 ~~-------~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~ 115 (336)
T 2p2s_A 83 AL-------RTLDAGKDFFTAKPPLTTLEQLDAVQRRVAE 115 (336)
T ss_dssp HH-------HHHHTTCEEEECSSCCSCHHHHHHHHHHHHH
T ss_pred HH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 54 2233454 66665 56778888888887766
No 215
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=98.09 E-value=7.2e-06 Score=92.40 Aligned_cols=106 Identities=15% Similarity=0.186 Sum_probs=80.9
Q ss_pred CCCCeEEEEccchHHHH-HHHHHHhC-CCeEE-EEeCChhHHHHHHhc--CCcccCCHHHHhcc--CcEEEEEcCChHHH
Q 001973 144 NSVTRVGFIGLGAMGFG-MATHLLRS-NFTVI-GYDVYRPTLTKFQNV--GGLIANSPAEAAKD--VGVLVIMVTNEAQA 216 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~--G~~~~~s~~e~~~~--aDvV~l~vp~~~~~ 216 (988)
|+++||||||+|.||.. ++..|.+. +.+|. ++|+++++.+.+.+. +....+|+++++++ .|+|++|+|+....
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~ 82 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHF 82 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 34579999999999995 89999876 67765 889999999888765 56778999999875 49999999987765
Q ss_pred HHHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 217 ESVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
+.+. ..+..| .++++.- +..+..++++.+...+
T Consensus 83 ~~~~-------~al~aGkhVl~EKPla~~~~e~~~l~~~a~~ 117 (359)
T 3m2t_A 83 EMGL-------LAMSKGVNVFVEKPPCATLEELETLIDAARR 117 (359)
T ss_dssp HHHH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHHH-------HHHHCCCeEEEECCCcCCHHHHHHHHHHHHH
Confidence 5544 223344 3555543 6678888888887766
No 216
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.08 E-value=7.6e-06 Score=90.60 Aligned_cols=101 Identities=18% Similarity=0.328 Sum_probs=68.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHH--HHH-hcCC------cc--cCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLT--KFQ-NVGG------LI--ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~--~l~-~~G~------~~--~~s~~e~~~~aDvV~l~vp~ 212 (988)
+|||+|||+|.||+.+|..|+.+|+ +|++||+++++.+ .+. ..+. .+ .++. ++++++|+||++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~aD~Vii~v~~ 85 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDP-EICRDADMVVITAGP 85 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCG-GGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCH-HHhCCCCEEEECCCC
Confidence 4699999999999999999999999 9999999987765 221 2222 11 2243 567899999999965
Q ss_pred hH---------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHH
Q 001973 213 EA---------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLER 252 (988)
Q Consensus 213 ~~---------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~ 252 (988)
+. .+++++ +.+.+. .++.+|+..++ +.+....+..
T Consensus 86 ~~~~g~~r~~~~~~n~~~~~~~~---~~i~~~-~~~~~vi~~~N-p~~~~~~~~~ 135 (319)
T 1lld_A 86 RQKPGQSRLELVGATVNILKAIM---PNLVKV-APNAIYMLITN-PVDIATHVAQ 135 (319)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHH---HHHHHH-CTTSEEEECCS-SHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHH---HHHHHh-CCCceEEEecC-chHHHHHHHH
Confidence 42 122444 344443 56677776544 4555444443
No 217
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.06 E-value=1.1e-05 Score=88.61 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=63.7
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHHHHh---cC------CcccCCHHHHhccCcEEEEEcCChH-
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTKFQN---VG------GLIANSPAEAAKDVGVLVIMVTNEA- 214 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l~~---~G------~~~~~s~~e~~~~aDvV~l~vp~~~- 214 (988)
|||+|||+|.||+++|..|+.+|+ +|++||+++++++.... .+ .++..+..+++++||+||++++.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~~ 80 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQK 80 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC-----
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCCC
Confidence 599999999999999999999999 99999999987654221 11 1222122467899999999996553
Q ss_pred --------------HHHHHHccccchhhhCCCCCEEEecCCCCHHH
Q 001973 215 --------------QAESVLYGDLGAVSALSSGASIILSSTVSPGF 246 (988)
Q Consensus 215 --------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~ 246 (988)
.++++. +.+.+. .++.+++..|+ +.+.
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~---~~i~~~-~p~~~vi~~tN-P~~~ 121 (304)
T 2v6b_A 81 PGESRLDLLEKNADIFRELV---PQITRA-APDAVLLVTSN-PVDL 121 (304)
T ss_dssp -------CHHHHHHHHHHHH---HHHHHH-CSSSEEEECSS-SHHH
T ss_pred CCCcHHHHHHhHHHHHHHHH---HHHHHh-CCCeEEEEecC-chHH
Confidence 224444 345555 46677776543 4443
No 218
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.03 E-value=3.5e-06 Score=98.74 Aligned_cols=243 Identities=16% Similarity=0.099 Sum_probs=174.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---hhccCCchhhhccccccccCCCCc-chHHHHH-----HhHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQ-FGIHPWVLYDII---SNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFI-----QNLG 70 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~-~Gld~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~-----KDl~ 70 (988)
+++|.+.+..+.+++|++.|+++ +|++++.+.+++ +.+.+.|++++.+.+.+.++||++ |.++.+. ||++
T Consensus 191 l~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~vd~i~D~~~~KgtG 270 (497)
T 2p4q_A 191 MVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVDGKPLVEKIMDTAGQKGTG 270 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTTSSBGGGGSCCCCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCCCccHHHHHHHhhccchHH
Confidence 47999999999999999999999 699999999998 468899999999988899999977 8899888 8886
Q ss_pred -HHHHHHHhcCCCCcHHHHHH-HHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCe
Q 001973 71 -IALDMAKTLAFPLPLLAVAH-QQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTR 148 (988)
Q Consensus 71 -la~~~a~~~g~~~p~~~~~~-~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~k 148 (988)
++.+.|.+.|+|+|+.+.+. ..+.... +..
T Consensus 271 ~~~~~~A~~~Gv~~P~~~~av~ar~~s~~---------------------------------------k~~--------- 302 (497)
T 2p4q_A 271 KWTAINALDLGMPVTLIGEAVFARCLSAL---------------------------------------KNE--------- 302 (497)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHC---------------------------------------HHH---------
T ss_pred HHHHHHHHHcCCCCchHHHHHHHHHhhcc---------------------------------------hhh---------
Confidence 78999999999999987753 2222110 000
Q ss_pred EEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccchhh
Q 001973 149 VGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGAVS 228 (988)
Q Consensus 149 IgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i~~ 228 (988)
+. ....++
T Consensus 303 --------------------------------r~--------------------------------~~~~~~-------- 310 (497)
T 2p4q_A 303 --------------------------------RI--------------------------------RASKVL-------- 310 (497)
T ss_dssp --------------------------------HH--------------------------------HHHHHC--------
T ss_pred --------------------------------HH--------------------------------HHhhhc--------
Confidence 00 000011
Q ss_pred hCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEEEE
Q 001973 229 ALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLYVI 308 (988)
Q Consensus 229 ~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~~~ 308 (988)
..|. +. .+ +
T Consensus 311 ------------------------------------~gp~-----------------~~---------------~~---~ 319 (497)
T 2p4q_A 311 ------------------------------------PGPE-----------------VP---------------KD---A 319 (497)
T ss_dssp ------------------------------------CCCC-----------------CC---------------TT---S
T ss_pred ------------------------------------CCCC-----------------cc---------------cc---c
Confidence 0010 00 00 0
Q ss_pred eCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhcC-CCccccccccccccCC-CCC---
Q 001973 309 KGGCGAGSGVKMANQLLAGVHIASAAEAMAFGAR------LGLNTRVLFNIITDSG-GSSWMFENRVPHMLDN-DYT--- 377 (988)
Q Consensus 309 ~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~------~Gid~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~~--- 377 (988)
..+..+.+|.+.|.+.+.++.+++|.+.+.++ .++|...+.++++.|. -.|++++...+.+... +..
T Consensus 320 --~~~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~ 397 (497)
T 2p4q_A 320 --VKDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQITKAYREEPDLENLL 397 (497)
T ss_dssp --CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHSSSTTCBHHHHHHHHHHHHCTTCSCGG
T ss_pred --ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCchHHHHHHHHHHHHhcCCChhhhh
Confidence 01345688999999999999999999999877 6899999999999775 5677766443333221 111
Q ss_pred --CCc--hhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhCcc
Q 001973 378 --PYS--ALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSGVK 440 (988)
Q Consensus 378 --~~~--~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~ 440 (988)
+.| .+.......+.++..|.+.|+|+|.+.++...|+.-.. +.-.+.+++..+...|..
T Consensus 398 ~~~~f~~~~~~~~~~~r~~v~~a~~~gvp~P~~s~aL~~~~~~~~----~~~~a~liqa~Rd~FG~H 460 (497)
T 2p4q_A 398 FNKFFADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGYRS----ERLPANLLQAQRDYFGAH 460 (497)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTC----SSCTHHHHHHHHHHHSCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccc----CCchhHHHHHHHHhcCCc
Confidence 112 23344446788999999999999999999997665432 233456888888887764
No 219
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=98.00 E-value=2.9e-05 Score=87.33 Aligned_cols=105 Identities=20% Similarity=0.240 Sum_probs=81.4
Q ss_pred CCeEEEEccchHHHHHHHHHH-h-CCCeEE-EEeCChhHHHHHHhc-C--CcccCCHHHHhc--cCcEEEEEcCChHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLL-R-SNFTVI-GYDVYRPTLTKFQNV-G--GLIANSPAEAAK--DVGVLVIMVTNEAQAE 217 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~-~-~G~~V~-v~dr~~~~~~~l~~~-G--~~~~~s~~e~~~--~aDvV~l~vp~~~~~~ 217 (988)
++||||||+|.||..++..|. + .+++|. ++|+++++.+.+.+. | ....++++++++ +.|+|++|+|+....+
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 102 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHAD 102 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHHH
Confidence 469999999999999999998 4 467755 799999999887654 6 677899999987 4899999999987665
Q ss_pred HHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHhc
Q 001973 218 SVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
.+. . .+..| .+++..- +..+..++++.+...+.
T Consensus 103 ~~~----~---al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~ 137 (357)
T 3ec7_A 103 VAV----A---ALNANKYVFCEKPLAVTAADCQRVIEAEQKN 137 (357)
T ss_dssp HHH----H---HHHTTCEEEEESSSCSSHHHHHHHHHHHHHH
T ss_pred HHH----H---HHHCCCCEEeecCccCCHHHHHHHHHHHHHh
Confidence 554 2 22334 4555553 67788888888877663
No 220
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=98.00 E-value=3.1e-05 Score=86.68 Aligned_cols=104 Identities=17% Similarity=0.182 Sum_probs=81.3
Q ss_pred CeEEEEccchHHHHHHHHHH-h-CCCeEE-EEeCChhHHHHHHhc-C--CcccCCHHHHhcc--CcEEEEEcCChHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLL-R-SNFTVI-GYDVYRPTLTKFQNV-G--GLIANSPAEAAKD--VGVLVIMVTNEAQAES 218 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~-~-~G~~V~-v~dr~~~~~~~l~~~-G--~~~~~s~~e~~~~--aDvV~l~vp~~~~~~~ 218 (988)
+||||||+|.||..++..|. + .++++. ++|+++++.+.+.+. | ....+++++++++ +|+|++|+|+....+.
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 82 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAHESS 82 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhHHHH
Confidence 59999999999999999998 5 467755 789999999887764 6 5678999999876 8999999999876655
Q ss_pred HHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHhc
Q 001973 219 VLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 219 vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
+. ..+..| ++++..- +..+..++++.+...+.
T Consensus 83 ~~-------~al~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~ 116 (344)
T 3mz0_A 83 VL-------KAIKAQKYVFCEKPLATTAEGCMRIVEEEIKV 116 (344)
T ss_dssp HH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHH
T ss_pred HH-------HHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHH
Confidence 54 223344 4555554 67788899988877663
No 221
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.99 E-value=3.4e-05 Score=86.91 Aligned_cols=112 Identities=12% Similarity=0.153 Sum_probs=82.1
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC-CCeE-EEEeCChhHHHHHHhc-C----CcccCCHHHHhc--cCcEEEEEcCChHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS-NFTV-IGYDVYRPTLTKFQNV-G----GLIANSPAEAAK--DVGVLVIMVTNEAQ 215 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~-G----~~~~~s~~e~~~--~aDvV~l~vp~~~~ 215 (988)
+++||||||+|.||..++..|.+. ++++ .++|+++++.+.+.+. | ....++++++++ ++|+|++|+|+...
T Consensus 5 ~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 84 (362)
T 1ydw_A 5 TQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLH 84 (362)
T ss_dssp -CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGH
T ss_pred CceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHH
Confidence 347999999999999999999885 5664 6899999998877654 5 356789999886 58999999998775
Q ss_pred HHHHHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHhcCCCceEec
Q 001973 216 AESVLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQFEGKDLKLVD 265 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~~~~g~~~ld 265 (988)
.+.+. ..+..|+ +++.. .+.....++++.+...+ .+..+..
T Consensus 85 ~~~~~-------~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~--~g~~~~~ 127 (362)
T 1ydw_A 85 VEWAI-------KAAEKGKHILLEKPVAMNVTEFDKIVDACEA--NGVQIMD 127 (362)
T ss_dssp HHHHH-------HHHTTTCEEEECSSCSSSHHHHHHHHHHHHT--TTCCEEE
T ss_pred HHHHH-------HHHHCCCeEEEecCCcCCHHHHHHHHHHHHH--cCCEEEE
Confidence 54443 2344565 45543 36677888888887766 3444443
No 222
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.99 E-value=3.3e-05 Score=85.01 Aligned_cols=101 Identities=15% Similarity=0.151 Sum_probs=68.7
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHH----Hhc------C--CcccCCHHHHhccCcEEEEEcCCh
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKF----QNV------G--GLIANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l----~~~------G--~~~~~s~~e~~~~aDvV~l~vp~~ 213 (988)
|||+|||+|.||.+++..|+..|+ +|.++|+++++++.. .+. . +..+++. +++++||+||++++.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~g~p 81 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTSGAP 81 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcCCCC
Confidence 699999999999999999999997 999999998766542 211 1 2234666 7789999999998665
Q ss_pred H---------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHH
Q 001973 214 A---------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERR 253 (988)
Q Consensus 214 ~---------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~ 253 (988)
. .++++. +.+.+.. ++.+++.. |++.+..-.+...
T Consensus 82 ~~~g~~r~dl~~~n~~i~~~i~---~~i~~~~-p~a~vi~~-tNPv~~~t~~~~~ 131 (309)
T 1ur5_A 82 RKPGMSREDLIKVNADITRACI---SQAAPLS-PNAVIIMV-NNPLDAMTYLAAE 131 (309)
T ss_dssp -------CHHHHHHHHHHHHHH---HHHGGGC-TTCEEEEC-CSSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHH---HHHHhhC-CCeEEEEc-CCchHHHHHHHHH
Confidence 3 122333 3344443 66666664 5566665444443
No 223
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.99 E-value=2.2e-05 Score=86.72 Aligned_cols=105 Identities=15% Similarity=0.208 Sum_probs=68.9
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHH----HHHhc-----CCcccCCHHHHhccCcEEEEEcCCh
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLT----KFQNV-----GGLIANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~----~l~~~-----G~~~~~s~~e~~~~aDvV~l~vp~~ 213 (988)
+++||+|||+|.+|.+++..|+..|+ +|.++|+++++++ ++.+. ..++..+..+++++||+||++++.+
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p 85 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 85 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 45799999999999999999999997 9999999987643 23221 1112223466789999999999876
Q ss_pred HH---------------HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHH
Q 001973 214 AQ---------------AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRL 254 (988)
Q Consensus 214 ~~---------------~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l 254 (988)
.. ++++. +.+.++ .++.+++.. |++++..-.+....
T Consensus 86 ~k~g~~r~dl~~~n~~i~~~i~---~~i~~~-~p~a~viv~-tNPv~~~~~~~~k~ 136 (318)
T 1y6j_A 86 RKPGETRLDLAKKNVMIAKEVT---QNIMKY-YNHGVILVV-SNPVDIITYMIQKW 136 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHH---HHHHHH-CCSCEEEEC-SSSHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHhhHHHHHHHH---HHHHHh-CCCcEEEEe-cCcHHHHHHHHHHH
Confidence 41 23333 345555 466777764 77777766655543
No 224
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.99 E-value=3.2e-05 Score=85.37 Aligned_cols=108 Identities=13% Similarity=0.163 Sum_probs=72.1
Q ss_pred hcCCCCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHH----HHh------cCCcccCCHHHHhccCcEEEE
Q 001973 141 AKSNSVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTK----FQN------VGGLIANSPAEAAKDVGVLVI 208 (988)
Q Consensus 141 m~~~~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----l~~------~G~~~~~s~~e~~~~aDvV~l 208 (988)
|++|++|||+|||+|.+|.+++..|+..|+ +|.+||+++++++. +.+ ....+..+..+++++||+||+
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi 80 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVI 80 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEE
Confidence 334556899999999999999999998884 89999999876653 222 122233355778999999999
Q ss_pred EcCChH---------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHH
Q 001973 209 MVTNEA---------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERR 253 (988)
Q Consensus 209 ~vp~~~---------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~ 253 (988)
+.+.+. .++++. +.+.++ .++.+++.. |.+.+..-.+...
T Consensus 81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~---~~i~~~-~p~a~viv~-tNPv~~~t~~~~k 135 (317)
T 3d0o_A 81 CAGAAQKPGETRLDLVSKNLKIFKSIV---GEVMAS-KFDGIFLVA-TNPVDILAYATWK 135 (317)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHH---HHHHHT-TCCSEEEEC-SSSHHHHHHHHHH
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHH---HHHHHh-CCCcEEEEe-cCcHHHHHHHHHH
Confidence 997653 223333 344444 566777774 5666665444443
No 225
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.99 E-value=9.1e-06 Score=89.39 Aligned_cols=97 Identities=21% Similarity=0.283 Sum_probs=74.3
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhC--CCeEEEEeCChhHHHHHHh-----cCC--cccCCHHHHhccCcEEEEEcCChH
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRS--NFTVIGYDVYRPTLTKFQN-----VGG--LIANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~-----~G~--~~~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
+...+|+|||+|.||..++..|.+. ..+|++|||+ +.+++.+ .|+ ..+ +++++++++|+|++|+|...
T Consensus 119 ~~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~ 195 (313)
T 3hdj_A 119 PRSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRSTT 195 (313)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSS
T ss_pred CCCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCC
Confidence 3457999999999999999999873 4689999999 5444443 255 345 99999999999999999753
Q ss_pred HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHH
Q 001973 215 QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLER 252 (988)
Q Consensus 215 ~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~ 252 (988)
.++. .+.+++|+.|++.++..|+. +++..
T Consensus 196 ---pvl~-----~~~l~~G~~V~~vGs~~p~~-~El~~ 224 (313)
T 3hdj_A 196 ---PLFA-----GQALRAGAFVGAIGSSLPHT-RELDD 224 (313)
T ss_dssp ---CSSC-----GGGCCTTCEEEECCCSSTTC-CCCCH
T ss_pred ---cccC-----HHHcCCCcEEEECCCCCCch-hhcCH
Confidence 2331 34688999999999988864 44433
No 226
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=97.97 E-value=2.1e-05 Score=89.99 Aligned_cols=181 Identities=12% Similarity=0.092 Sum_probs=114.3
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc---chHHHHHHhHHHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL---HFLNAFIQNLGIALDMAK 77 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~---f~l~l~~KDl~la~~~a~ 77 (988)
|+||++.+++++.+.|+..++++.|+|++.++++++..+.- . .|.| |.-.-+-||..+....|+
T Consensus 216 l~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ri----~---------~l~pG~G~GG~C~pkD~~~L~~~a~ 282 (431)
T 3ojo_A 216 LMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRV----N---------IHQPGPGVGGHCLAVDPYFIIAKDP 282 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTC----C---------CCCCCSCCCCCCBCSCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCCCc----c---------cCCCCCCccccchhhhHHHHHHHHH
Confidence 57999999999999999999999999999999999765421 1 1222 222334588888888888
Q ss_pred hcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccch-
Q 001973 78 TLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLGA- 156 (988)
Q Consensus 78 ~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G~- 156 (988)
+.| ++..++.+.=+.... -+++.+.+..+ ..+..||+|+|+-.
T Consensus 283 ~~~---~li~~~~~iN~~~~~---------~v~~~~~~~l~------------------------~~~~~~v~vlGlafK 326 (431)
T 3ojo_A 283 ENA---KLIQTGREINNSMPA---------YVVDTTKQIIK------------------------ALSGNKVTVFGLTYK 326 (431)
T ss_dssp -CC---HHHHHHHHHHHTHHH---------HHHHHHHHHHH------------------------HSSCCEEEEECCCSS
T ss_pred HHh---HHHHHHHHHHHHhHH---------HHHHHHHHHhh------------------------hcCCCEEEEEeeeeC
Confidence 776 555554443221110 12222222110 01225899999753
Q ss_pred ---------HHHHHHHHHHhC-CCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 157 ---------MGFGMATHLLRS-NFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 157 ---------mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
-...++..|.+. |.+|.+||...... ..+.++.++++++|.|++++..+. .+.+-+ +.+
T Consensus 327 ~~tdD~ReSpa~~i~~~L~~~~g~~V~~~DP~~~~~--------~~~~~~~~~~~~ad~vvi~t~~~~-f~~~d~--~~~ 395 (431)
T 3ojo_A 327 GDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELD--------FVEHDMSHAVKDASLVLILSDHSE-FKNLSD--SHF 395 (431)
T ss_dssp TTSCCCTTCHHHHHHHHHHHSTTCEEEEECSSCCCT--------TBCSTTHHHHTTCSEEEECSCCGG-GTSCCG--GGG
T ss_pred CCCcchhcChHHHHHHHHHhhcCCEEEEECCCcccc--------cccCCHHHHHhCCCEEEEecCCHH-HhccCH--HHH
Confidence 468899999999 99999999764431 346788999999999999999876 332211 223
Q ss_pred hhhCCCCCEEEecCCCC
Q 001973 227 VSALSSGASIILSSTVS 243 (988)
Q Consensus 227 ~~~l~~g~ivId~st~~ 243 (988)
..+ ++.+|+|.-+..
T Consensus 396 -~~~-~~~~i~D~r~~~ 410 (431)
T 3ojo_A 396 -DKM-KHKVIFDTKNVV 410 (431)
T ss_dssp -TTC-SSCEEEESSCCC
T ss_pred -HhC-CCCEEEECCCCC
Confidence 323 367999988775
No 227
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.96 E-value=1.6e-05 Score=88.52 Aligned_cols=105 Identities=12% Similarity=0.061 Sum_probs=78.0
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCC-Ce-EEEEeCChhHHHHHHhc-CCc-ccCCHHHHhc--cCcEEEEEcCChHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSN-FT-VIGYDVYRPTLTKFQNV-GGL-IANSPAEAAK--DVGVLVIMVTNEAQAES 218 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G-~~-V~v~dr~~~~~~~l~~~-G~~-~~~s~~e~~~--~aDvV~l~vp~~~~~~~ 218 (988)
+++||||||+|.||..++..|.+.+ .+ +.++|+++++.+.+.+. |+. ..++++++++ +.|+|++|+|+....+.
T Consensus 4 ~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 83 (329)
T 3evn_A 4 SKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKV 83 (329)
T ss_dssp -CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHH
T ss_pred CceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHH
Confidence 4579999999999999999998764 45 45789999988777654 654 6789999998 78999999999876555
Q ss_pred HHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 219 VLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 219 vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
+. ..+..| .+++..- +..+..++++.+...+
T Consensus 84 ~~-------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~ 116 (329)
T 3evn_A 84 AK-------AALLAGKHVLVEKPFTLTYDQANELFALAES 116 (329)
T ss_dssp HH-------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHH
T ss_pred HH-------HHHHCCCeEEEccCCcCCHHHHHHHHHHHHH
Confidence 43 123344 4555553 6678888888887766
No 228
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.96 E-value=3.7e-06 Score=90.01 Aligned_cols=113 Identities=12% Similarity=0.030 Sum_probs=78.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
.+++.|||+|.||.+++..|++.|.+|+++||++++.+++.+.|+... +++++ .++|+||.|+|.....+..+ ..+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~l-~~~DiVInaTp~Gm~~~~~l-~~~~ 194 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPPK-SAFDLIINATSASLHNELPL-NKEV 194 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCCS-SCCSEEEECCTTCCCCSCSS-CHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHHh-ccCCEEEEcccCCCCCCCCC-ChHH
Confidence 358999999999999999999999999999999999988875564432 23332 38999999998653211111 1112
Q ss_pred hhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 226 AVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 226 i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
+.+.++++.+++|+... | .+. +.+...+ +|...+++
T Consensus 195 l~~~l~~~~~v~D~vY~-P-~T~-ll~~A~~--~G~~~~~G 230 (269)
T 3phh_A 195 LKGYFKEGKLAYDLAYG-F-LTP-FLSLAKE--LKTPFQDG 230 (269)
T ss_dssp HHHHHHHCSEEEESCCS-S-CCH-HHHHHHH--TTCCEECS
T ss_pred HHhhCCCCCEEEEeCCC-C-chH-HHHHHHH--CcCEEECC
Confidence 22245678999999987 4 443 5555555 45555543
No 229
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.95 E-value=2.1e-05 Score=90.96 Aligned_cols=106 Identities=12% Similarity=0.070 Sum_probs=80.3
Q ss_pred CCCCeEEEEccchHHH-HHHHHHHhC-CCe-EEEEeCChhHHHHHHhc-CCc-----ccCCHHHHhc--cCcEEEEEcCC
Q 001973 144 NSVTRVGFIGLGAMGF-GMATHLLRS-NFT-VIGYDVYRPTLTKFQNV-GGL-----IANSPAEAAK--DVGVLVIMVTN 212 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~-~lA~~L~~~-G~~-V~v~dr~~~~~~~l~~~-G~~-----~~~s~~e~~~--~aDvV~l~vp~ 212 (988)
++++||||||+|.||. .++..|.+. +++ |.++|+++++.+.+.+. |+. ..++++++++ +.|+|++|+|+
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~ 160 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPN 160 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCG
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCc
Confidence 3457999999999997 899999875 466 46899999998887654 654 5788999887 78999999999
Q ss_pred hHHHHHHHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHh
Q 001973 213 EAQAESVLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 213 ~~~~~~vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~ 256 (988)
....+.+. ..+..|+ +++.. .+..+..++++.+...+
T Consensus 161 ~~h~~~~~-------~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~ 199 (433)
T 1h6d_A 161 SLHAEFAI-------RAFKAGKHVMCEKPMATSVADCQRMIDAAKA 199 (433)
T ss_dssp GGHHHHHH-------HHHHTTCEEEECSSCCSSHHHHHHHHHHHHH
T ss_pred hhHHHHHH-------HHHHCCCcEEEcCCCCCCHHHHHHHHHHHHH
Confidence 87655554 2233454 56654 46678888888887766
No 230
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.95 E-value=1.8e-05 Score=91.96 Aligned_cols=93 Identities=17% Similarity=0.097 Sum_probs=78.3
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..++|+|||+|.||..+|+.+...|.+|++||+++.+.+...+.|+.. .++.++++.+|+||+|+++...+. .
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atgt~~~i~------~ 345 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATGNKDIIM------L 345 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSSSSCSBC------H
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCCCHHHHH------H
Confidence 457999999999999999999999999999999999988888888864 578888999999999998765221 1
Q ss_pred chhhhCCCCCEEEecCCCCH
Q 001973 225 GAVSALSSGASIILSSTVSP 244 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p 244 (988)
...+.++++.++++.+....
T Consensus 346 ~~l~~mk~ggilvnvG~~~~ 365 (494)
T 3ce6_A 346 EHIKAMKDHAILGNIGHFDN 365 (494)
T ss_dssp HHHHHSCTTCEEEECSSSGG
T ss_pred HHHHhcCCCcEEEEeCCCCC
Confidence 34567889999999987653
No 231
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=97.94 E-value=2e-05 Score=87.07 Aligned_cols=71 Identities=20% Similarity=0.278 Sum_probs=56.4
Q ss_pred CCCCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhc------CCcccCCHHHHhccCcEEEEEc
Q 001973 143 SNSVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTK----FQNV------GGLIANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 143 ~~~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----l~~~------G~~~~~s~~e~~~~aDvV~l~v 210 (988)
++..+||+|||+|.||.++|..|+..|+ +|.+||+++++++. |... +....++..+++++||+||++.
T Consensus 2 ~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~a 81 (326)
T 3pqe_A 2 NKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICA 81 (326)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEec
Confidence 4456899999999999999999999997 89999999988765 5442 2233334457789999999998
Q ss_pred CCh
Q 001973 211 TNE 213 (988)
Q Consensus 211 p~~ 213 (988)
+.+
T Consensus 82 g~p 84 (326)
T 3pqe_A 82 GAN 84 (326)
T ss_dssp SCC
T ss_pred ccC
Confidence 754
No 232
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.94 E-value=3.9e-05 Score=86.56 Aligned_cols=104 Identities=18% Similarity=0.218 Sum_probs=77.4
Q ss_pred CCCeEEEEccchHHHH-HHHHHHhC-CCeE-EEEeCChhHHHHHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFG-MATHLLRS-NFTV-IGYDVYRPTLTKFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~v 219 (988)
+++||||||+|.||.. .+..|.+. +++| .++|++++++.. ...+....+|++++++ +.|+|++|+|+....+.+
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~ 84 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKR-DLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLA 84 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHH-HCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHH
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-hCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 4579999999999997 67777765 6776 478999987652 2236677899999998 789999999998766555
Q ss_pred HccccchhhhCCCCCEEEecC--CCCHHHHHHHHHHHHh
Q 001973 220 LYGDLGAVSALSSGASIILSS--TVSPGFVSQLERRLQF 256 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~s--t~~p~~~~~l~~~l~~ 256 (988)
. ..+..|+-|+... +..+..++++.+...+
T Consensus 85 ~-------~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~ 116 (364)
T 3e82_A 85 R-------LALNAGKHVVVDKPFTLDMQEARELIALAEE 116 (364)
T ss_dssp H-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred H-------HHHHCCCcEEEeCCCcCCHHHHHHHHHHHHH
Confidence 4 2334555555444 6778888888887766
No 233
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.89 E-value=6e-06 Score=89.03 Aligned_cols=110 Identities=10% Similarity=0.092 Sum_probs=76.1
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCC-cccCCHHHHhccCcEEEEEcCChHH--HHHHHcc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGG-LIANSPAEAAKDVGVLVIMVTNEAQ--AESVLYG 222 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~-~~~~s~~e~~~~aDvV~l~vp~~~~--~~~vl~~ 222 (988)
+++.|||+|.||.+++..|++.|. +|+++||++++.+++..... ...+++.+++.++|+||.|+|.... ....+
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l-- 195 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVI-- 195 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCSS--
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCC--
Confidence 489999999999999999999998 89999999998877654321 1233556667899999999987531 11111
Q ss_pred ccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec
Q 001973 223 DLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD 265 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld 265 (988)
-...++++.+++|++.. |..+ .+.+...+ +|...++
T Consensus 196 ---~~~~l~~~~~V~D~vY~-P~~T-~ll~~A~~--~G~~~~~ 231 (277)
T 3don_A 196 ---SLNRLASHTLVSDIVYN-PYKT-PILIEAEQ--RGNPIYN 231 (277)
T ss_dssp ---CCTTCCSSCEEEESCCS-SSSC-HHHHHHHH--TTCCEEC
T ss_pred ---CHHHcCCCCEEEEecCC-CCCC-HHHHHHHH--CcCEEeC
Confidence 12456789999999987 4333 35555555 4555444
No 234
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=97.89 E-value=6.9e-06 Score=92.16 Aligned_cols=113 Identities=16% Similarity=0.131 Sum_probs=83.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHc------------------------CCCHHHHHHHHhhcc-CCchhhhccccccccC
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQF------------------------GIHPWVLYDIISNAA-GNSWIFKNYIPNLLRG 55 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~------------------------Gld~~~~~~~l~~~~-~~s~~~~~~~~~~~~~ 55 (988)
++||.+.++.+++++|++.|++++ |+|++.+.++++.|+ .+||+++.....+. +
T Consensus 211 l~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~-~ 289 (358)
T 4e21_A 211 MVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRYDLDLADITEVWRRGSVISSWLLDLSATALL-D 289 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCCCCCHHHHHHHHTTTSTTCBHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhcccCCCHHHHHHHHhCccHHHHHHHHHHHHHHh-h
Confidence 479999999999999999999998 999999999999987 89999998765443 3
Q ss_pred CCCcc-hHHHHHHhH---HHHHHHHHhcCCCCcHHHHHHHHHHHHhhCcCCCCCch-hHHHHHHhhhcc
Q 001973 56 DAKLH-FLNAFIQNL---GIALDMAKTLAFPLPLLAVAHQQLILGLSHAHANDDNP-PLVKVWENVLGV 119 (988)
Q Consensus 56 ~~~~f-~l~l~~KDl---~la~~~a~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~-~~~~~~~~~~g~ 119 (988)
+.. + .+....||. +++++.|.+.|+|+|+.+.+ +|.+...+ ++.+++ .++..+++.+|.
T Consensus 290 ~p~-~~~~~~~~~d~g~~r~~~~~A~~~gvp~p~~~~a--l~~~~~s~--~~~~~~~~l~~a~r~~fG~ 353 (358)
T 4e21_A 290 SPD-LQEFQGRVSDSGEGRWTVAAAIDEGVPAHVLSSA--LYERFSSR--GEDDFANRLLSAMRYEFGG 353 (358)
T ss_dssp CTT-CTTC--CCCCCSHHHHHHHHHHHHTCCCHHHHHH--HHHHHHHT--TTTHHHHHHHHHHC-----
T ss_pred CCC-hHHHHHHHHhcCcHHHHHHHHHHcCCChHHHHHH--HHHHHHHC--CCcccHHHHHHHHHHhcCC
Confidence 311 2 244555666 78999999999999999876 44444443 555665 488888877764
No 235
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.88 E-value=4.9e-05 Score=84.62 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=79.8
Q ss_pred CeEEEEccchHHHHHHHHHHhCC---Ce-EEEEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEEcCChHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSN---FT-VIGYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIMVTNEAQAES 218 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G---~~-V~v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~vp~~~~~~~ 218 (988)
+||||||+|.||..++..|.+.+ ++ |.++|+++++.+++.+. |+ ...+|++++++ +.|+|++|+|+....+.
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~ 82 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAA 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGHHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHH
Confidence 69999999999999999998764 34 66789999999887654 66 46889999987 68999999999876655
Q ss_pred HHccccchhhhCCCC-CEEEec-CCCCHHHHHHHHHHHHh
Q 001973 219 VLYGDLGAVSALSSG-ASIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 219 vl~~~~~i~~~l~~g-~ivId~-st~~p~~~~~l~~~l~~ 256 (988)
+. . .+..| ++++.. -+..+..++++.+...+
T Consensus 83 ~~----~---al~~GkhVl~EKP~a~~~~e~~~l~~~a~~ 115 (334)
T 3ohs_X 83 VM----L---CLAAGKAVLCEKPMGVNAAEVREMVTEARS 115 (334)
T ss_dssp HH----H---HHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HH----H---HHhcCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 54 2 23334 456654 36678888888887766
No 236
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.87 E-value=1.2e-05 Score=77.63 Aligned_cols=104 Identities=13% Similarity=0.118 Sum_probs=75.2
Q ss_pred CeEEEEcc----chHHHHHHHHHHhCCCeEEEEeCChhH-HHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 147 TRVGFIGL----GAMGFGMATHLLRSNFTVIGYDVYRPT-LTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 147 ~kIgiIG~----G~mG~~lA~~L~~~G~~V~v~dr~~~~-~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
.+|+|||+ |.+|..++++|.+.||+ +|++|+.+ .+++ .|.++..|+.|+.+..|++++++|... +.+++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~~i--~G~~~~~sl~el~~~vDlavi~vp~~~-~~~v~- 87 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGEEL--FGEEAVASLLDLKEPVDILDVFRPPSA-LMDHL- 87 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTSEE--TTEECBSSGGGCCSCCSEEEECSCHHH-HTTTH-
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccCcC--CCEEecCCHHHCCCCCCEEEEEeCHHH-HHHHH-
Confidence 58999999 89999999999999997 77888874 2222 477888899998889999999999844 55555
Q ss_pred cccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEec
Q 001973 222 GDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVD 265 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ld 265 (988)
+++.+.- .+.+|+..++. .+++.+...+ .|++++.
T Consensus 88 --~~~~~~g-i~~i~~~~g~~----~~~~~~~a~~--~Gir~vg 122 (140)
T 1iuk_A 88 --PEVLALR-PGLVWLQSGIR----HPEFEKALKE--AGIPVVA 122 (140)
T ss_dssp --HHHHHHC-CSCEEECTTCC----CHHHHHHHHH--TTCCEEE
T ss_pred --HHHHHcC-CCEEEEcCCcC----HHHHHHHHHH--cCCEEEc
Confidence 3444332 34577665554 3556666655 5677763
No 237
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.87 E-value=2.4e-05 Score=85.19 Aligned_cols=66 Identities=15% Similarity=0.125 Sum_probs=53.1
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhc------C--CcccCCHHHHhccCcEEEEEcCC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTK----FQNV------G--GLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----l~~~------G--~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
|||+|||+|.||+++|..|+.+|+ +|.+||+++++++. +.+. . +..+++ .+++++||+||++.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag~ 79 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCCC
Confidence 599999999999999999999998 99999999988652 2221 1 223445 7889999999999876
Q ss_pred h
Q 001973 213 E 213 (988)
Q Consensus 213 ~ 213 (988)
+
T Consensus 80 ~ 80 (294)
T 1oju_A 80 A 80 (294)
T ss_dssp C
T ss_pred C
Confidence 5
No 238
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.87 E-value=0.00097 Score=76.19 Aligned_cols=187 Identities=13% Similarity=0.124 Sum_probs=131.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCc---chHHHHHHhHHHHHHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKL---HFLNAFIQNLGIALDMAK 77 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~---f~l~l~~KDl~la~~~a~ 77 (988)
++.|.+.+++++.+-|-..++++.|+|...+++++..-.-.++ .. |.| |.-.-+-||..+....|+
T Consensus 229 l~eN~~ravnIa~~NEla~ice~~GiDv~eV~~a~~~d~rig~-------~~----l~PG~G~GG~CipkD~~~L~~~a~ 297 (444)
T 3vtf_A 229 YASNVFLALKISFANEVGLLAKRLGVDTYRVFEAVGLDKRIGR-------HY----FGAGLGFGGSCFPKDTLAFIRFGE 297 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTSCS-------TT----CCCSSCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCCCCCC-------CC----CCCCCCCCCcccCcCHHHHHHHHH
Confidence 4689999999999999999999999999999999864321111 11 122 223345699999999999
Q ss_pred hcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccc--
Q 001973 78 TLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLG-- 155 (988)
Q Consensus 78 ~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G-- 155 (988)
+.|+++++..++++.=+..... +++.+.+..+ ..+..||+|+|+-
T Consensus 298 ~~g~~~~li~a~~~iN~~~~~~---------vv~~l~~~~~------------------------~l~g~~V~vlGlafK 344 (444)
T 3vtf_A 298 SLGLEMAISKAVLRVNEYMPRY---------AVQLLEERLG------------------------GLRGRHVGVLGLAFK 344 (444)
T ss_dssp HTTCCCHHHHHHHHHHHHHHHH---------HHHHHHHHHT------------------------CCTTCEEEEECCSSS
T ss_pred hcCCCHHHHHhhHHHHHHHHHH---------HHHHHHHHcc------------------------ccCCCEEEEEeeecC
Confidence 9999999888877654432211 3333333211 0122489999875
Q ss_pred --------hHHHHHHHHHHhCCCeEEEEeCCh-hHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 156 --------AMGFGMATHLLRSNFTVIGYDVYR-PTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 156 --------~mG~~lA~~L~~~G~~V~v~dr~~-~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
.=...++..|.+.|.+|.+||... +.........+..++++.++++++|.|++++..++ .+.+
T Consensus 345 ~~tdD~ReSpa~~ii~~L~~~Ga~V~~~DP~~~~~~~~~~~~~~~~~~~~~~a~~~aDavvi~t~h~e-f~~l------- 416 (444)
T 3vtf_A 345 PNTDDVRESRGVEVARLLLERGARVYVHDPMAMEKARAVLGDSVTYVEDPQALLDQVEGVIIATAWPQ-YEGL------- 416 (444)
T ss_dssp SSCCCCTTCHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHGGGSEECSCHHHHHHHCSEEEECSCCGG-GGGS-------
T ss_pred CCCCccccCcHHHHHHHHHHCCCEEEEECCCCChHHHHhcCCCceecCCHHHHHhCCCEEEEccCCHH-HhCC-------
Confidence 237789999999999999999764 22233333456778999999999999999998865 2211
Q ss_pred hhhCCCCCEEEecCCC
Q 001973 227 VSALSSGASIILSSTV 242 (988)
Q Consensus 227 ~~~l~~g~ivId~st~ 242 (988)
--++.+|+|.-++
T Consensus 417 ---d~~~~vv~D~Rni 429 (444)
T 3vtf_A 417 ---DYRGKVVVDGRYV 429 (444)
T ss_dssp ---CCTTCEEEESSCC
T ss_pred ---CcCCCEEEECCCC
Confidence 1146799997665
No 239
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=97.87 E-value=2.1e-05 Score=91.02 Aligned_cols=109 Identities=16% Similarity=0.069 Sum_probs=82.1
Q ss_pred CCCCeEEEEcc----chHHHHHHHHHHhC--CCeE-EEEeCChhHHHHHHhc-CCc---ccCCHHHHhc--cCcEEEEEc
Q 001973 144 NSVTRVGFIGL----GAMGFGMATHLLRS--NFTV-IGYDVYRPTLTKFQNV-GGL---IANSPAEAAK--DVGVLVIMV 210 (988)
Q Consensus 144 ~~~~kIgiIG~----G~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~l~~~-G~~---~~~s~~e~~~--~aDvV~l~v 210 (988)
|+++||||||+ |.||..++..|.+. +++| .++|+++++.+.+.+. |+. ..++++++++ +.|+|++|+
T Consensus 18 m~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~t 97 (438)
T 3btv_A 18 AAPIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAI 97 (438)
T ss_dssp -CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECS
T ss_pred cCCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeC
Confidence 35679999999 99999999999987 6775 6899999998887764 654 6789999986 689999999
Q ss_pred CChHHHHHHHccccchhhhC----CCCCEEEec-CCCCHHHHHHHHHHHHh
Q 001973 211 TNEAQAESVLYGDLGAVSAL----SSGASIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 211 p~~~~~~~vl~~~~~i~~~l----~~g~ivId~-st~~p~~~~~l~~~l~~ 256 (988)
|+....+.+. ..++.- +..++++.. .+..+..++++.+...+
T Consensus 98 p~~~H~~~~~----~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~ 144 (438)
T 3btv_A 98 QVASHYEVVM----PLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAE 144 (438)
T ss_dssp CHHHHHHHHH----HHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHT
T ss_pred CcHHHHHHHH----HHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHH
Confidence 9887665554 122211 013577775 46678888888887765
No 240
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.86 E-value=3.3e-05 Score=85.20 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=53.9
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHH----HHHhc------CCc--ccCCHHHHhccCcEEEEEcC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLT----KFQNV------GGL--IANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~----~l~~~------G~~--~~~s~~e~~~~aDvV~l~vp 211 (988)
+++||+|||+|.||.++|..|+..|+ +|.+||+++++++ ++.+. ... .+++. +++++||+||++.+
T Consensus 6 ~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag 84 (324)
T 3gvi_A 6 ARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAG 84 (324)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccC
Confidence 34799999999999999999999999 9999999988764 23221 222 24565 78999999999986
Q ss_pred Ch
Q 001973 212 NE 213 (988)
Q Consensus 212 ~~ 213 (988)
.+
T Consensus 85 ~p 86 (324)
T 3gvi_A 85 VP 86 (324)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 241
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.86 E-value=6.7e-06 Score=87.62 Aligned_cols=91 Identities=11% Similarity=0.007 Sum_probs=69.4
Q ss_pred eEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 148 RVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 148 kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+|+|||+|.||.+++..|.+.|. +|+++||++++.+++.+. +....+++.+.++++|+||.|+|....-..... .
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~~~i---~ 186 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEELPV---S 186 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCCCSC---C
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCCCCC---C
Confidence 79999999999999999999998 899999999998887653 222345677888999999999985321000000 0
Q ss_pred hhhhCCCCCEEEecCCC
Q 001973 226 AVSALSSGASIILSSTV 242 (988)
Q Consensus 226 i~~~l~~g~ivId~st~ 242 (988)
...++++.+|+|+...
T Consensus 187 -~~~l~~~~~V~Divy~ 202 (253)
T 3u62_A 187 -DDSLKNLSLVYDVIYF 202 (253)
T ss_dssp -HHHHTTCSEEEECSSS
T ss_pred -HHHhCcCCEEEEeeCC
Confidence 2345689999999887
No 242
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.85 E-value=2.7e-05 Score=87.96 Aligned_cols=92 Identities=15% Similarity=0.082 Sum_probs=75.2
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..++++|||+|.+|..+|+.+...|.+|+++|+++.+..+....|... .++.++++.+|+|+++.++.. ++. .
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~LeElL~~ADIVv~atgt~~----lI~--~ 318 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VTLDDAASTADIVVTTTGNKD----VIT--I 318 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECCSSSS----SBC--H
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-ccHHHHHhhCCEEEECCCCcc----ccC--H
Confidence 457999999999999999999999999999999998766666667765 478999999999999876533 221 2
Q ss_pred chhhhCCCCCEEEecCCCC
Q 001973 225 GAVSALSSGASIILSSTVS 243 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~ 243 (988)
+....+++|.++|+++...
T Consensus 319 e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 319 DHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp HHHHHSCTTEEEEECSSST
T ss_pred HHHhcCCCCeEEEEcCCCC
Confidence 4456789999999998765
No 243
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.84 E-value=5.7e-05 Score=84.74 Aligned_cols=104 Identities=16% Similarity=0.191 Sum_probs=78.3
Q ss_pred CCCeEEEEccchHHHH-HHHHHHhC-CCeE-EEEeCChhHHHHHHhcCCcccCCHHHHhcc--CcEEEEEcCChHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFG-MATHLLRS-NFTV-IGYDVYRPTLTKFQNVGGLIANSPAEAAKD--VGVLVIMVTNEAQAESV 219 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~--aDvV~l~vp~~~~~~~v 219 (988)
+++||||||+|.||.. .+..|.+. +++| .++|+++++.++ ...+....+|+++++++ .|+|++|+|+....+.+
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 84 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-DWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLA 84 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-TCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-hCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 3579999999999997 78888776 6775 478999988762 12256778999999875 89999999998766555
Q ss_pred HccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 220 LYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 220 l~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
. ..+..| ++++..- +..+..++++.+...+
T Consensus 85 ~-------~al~aGkhV~~EKPla~~~~e~~~l~~~a~~ 116 (352)
T 3kux_A 85 Q-------SALAAGKHVVVDKPFTVTLSQANALKEHADD 116 (352)
T ss_dssp H-------HHHHTTCEEEECSSCCSCHHHHHHHHHHHHH
T ss_pred H-------HHHHCCCcEEEECCCcCCHHHHHHHHHHHHH
Confidence 4 223344 4666655 6778888888887766
No 244
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.84 E-value=4.7e-05 Score=88.99 Aligned_cols=106 Identities=18% Similarity=0.090 Sum_probs=82.8
Q ss_pred CCCCeEEEEcc----chHHHHHHHHHHhC--CCeE-EEEeCChhHHHHHHhc-CCc---ccCCHHHHhc--cCcEEEEEc
Q 001973 144 NSVTRVGFIGL----GAMGFGMATHLLRS--NFTV-IGYDVYRPTLTKFQNV-GGL---IANSPAEAAK--DVGVLVIMV 210 (988)
Q Consensus 144 ~~~~kIgiIG~----G~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~l~~~-G~~---~~~s~~e~~~--~aDvV~l~v 210 (988)
|+++||||||+ |.||...+..|.+. +++| .++|+++++.+.+.+. |+. ..+|++++++ +.|+|++|+
T Consensus 37 m~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~t 116 (479)
T 2nvw_A 37 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSV 116 (479)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECS
T ss_pred CCcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcC
Confidence 45579999999 99999999999986 6775 5889999999887765 654 7889999986 689999999
Q ss_pred CChHHHHHHHccccchhhhCCCC-------CEEEec-CCCCHHHHHHHHHHHHh
Q 001973 211 TNEAQAESVLYGDLGAVSALSSG-------ASIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 211 p~~~~~~~vl~~~~~i~~~l~~g-------~ivId~-st~~p~~~~~l~~~l~~ 256 (988)
|+....+.+. .. +..| .++++. .+..+..++++.+...+
T Consensus 117 p~~~H~~~~~----~a---l~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~ 163 (479)
T 2nvw_A 117 KVPEHYEVVK----NI---LEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQ 163 (479)
T ss_dssp CHHHHHHHHH----HH---HHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHT
T ss_pred CcHHHHHHHH----HH---HHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHH
Confidence 9887666554 22 2233 477776 46778888888887765
No 245
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.83 E-value=1.4e-05 Score=90.55 Aligned_cols=94 Identities=21% Similarity=0.206 Sum_probs=72.0
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-cCCcc------cCCHHHHhccCcEEEEEcCChHH-HH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-VGGLI------ANSPAEAAKDVGVLVIMVTNEAQ-AE 217 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-~G~~~------~~s~~e~~~~aDvV~l~vp~~~~-~~ 217 (988)
..+|+|||+|.+|..+++.+...|.+|++||+++++.+.+.+ .|... ..++.+.+.++|+||.|++.+.. ..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t~ 247 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKAP 247 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCCc
Confidence 369999999999999999999999999999999999888776 45542 23456778899999999865542 11
Q ss_pred HHHccccchhhhCCCCCEEEecCC
Q 001973 218 SVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~ivId~st 241 (988)
.++. +...+.++++.+|||.+.
T Consensus 248 ~li~--~~~l~~mk~g~~iV~va~ 269 (377)
T 2vhw_A 248 KLVS--NSLVAHMKPGAVLVDIAI 269 (377)
T ss_dssp CCBC--HHHHTTSCTTCEEEEGGG
T ss_pred ceec--HHHHhcCCCCcEEEEEec
Confidence 1111 234566789999999983
No 246
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.82 E-value=6.9e-05 Score=82.66 Aligned_cols=71 Identities=18% Similarity=0.189 Sum_probs=53.4
Q ss_pred CCCCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHHH----Hhc------CCcccCCHHHHhccCcEEEEEc
Q 001973 143 SNSVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTKF----QNV------GGLIANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 143 ~~~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~l----~~~------G~~~~~s~~e~~~~aDvV~l~v 210 (988)
+++++||+|||+|.||.++|..|+..|. +|.+||+++++.+.. .+. ..++..+..+++++||+||++.
T Consensus 3 ~~~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~ 82 (316)
T 1ldn_A 3 NNGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICA 82 (316)
T ss_dssp TTTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECC
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcC
Confidence 3445799999999999999999998874 899999998765432 221 1122234567789999999997
Q ss_pred CCh
Q 001973 211 TNE 213 (988)
Q Consensus 211 p~~ 213 (988)
+.+
T Consensus 83 ~~~ 85 (316)
T 1ldn_A 83 GAN 85 (316)
T ss_dssp SCC
T ss_pred CCC
Confidence 655
No 247
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=97.82 E-value=4.4e-05 Score=88.41 Aligned_cols=79 Identities=19% Similarity=0.147 Sum_probs=55.9
Q ss_pred hHHHhhhcCCCCCeEEEEccchH-HHHHHHHHHhC-----CCeEEEEeCChhHHHHHHhc--------C----CcccCCH
Q 001973 135 LAKQITAKSNSVTRVGFIGLGAM-GFGMATHLLRS-----NFTVIGYDVYRPTLTKFQNV--------G----GLIANSP 196 (988)
Q Consensus 135 ~~~~~~m~~~~~~kIgiIG~G~m-G~~lA~~L~~~-----G~~V~v~dr~~~~~~~l~~~--------G----~~~~~s~ 196 (988)
+..+-+||| +++||+|||+|.+ |.++|..|+.+ +++|.+||+++++++..... + +..++++
T Consensus 18 ~~~~~~m~m-~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 18 LYFQSNMKK-KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp --------C-CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred eeecccccc-CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 333333433 3569999999999 66788888887 67899999999887653321 1 2345788
Q ss_pred HHHhccCcEEEEEcCChH
Q 001973 197 AEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 197 ~e~~~~aDvV~l~vp~~~ 214 (988)
.+++++||+||+++|.+.
T Consensus 97 ~eal~~AD~VViaag~~~ 114 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRVGK 114 (472)
T ss_dssp HHHHSSCSEEEECCCTTH
T ss_pred HHHHcCCCEEEEcCCCcc
Confidence 899999999999999854
No 248
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.80 E-value=0.0001 Score=81.24 Aligned_cols=68 Identities=13% Similarity=0.244 Sum_probs=53.3
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHH----HHHhc------CCcc--cCCHHHHhccCcEEEEEcC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLT----KFQNV------GGLI--ANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~----~l~~~------G~~~--~~s~~e~~~~aDvV~l~vp 211 (988)
+++||+|||+|.||.++|..|+..|+ +|.+||+++++++ ++.+. ...+ +++ .+++++||+||++.+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIVTAG 82 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEEcCC
Confidence 34799999999999999999999998 9999999988764 23321 2223 344 578899999999976
Q ss_pred Ch
Q 001973 212 NE 213 (988)
Q Consensus 212 ~~ 213 (988)
.+
T Consensus 83 ~p 84 (321)
T 3p7m_A 83 VP 84 (321)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 249
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.80 E-value=5.6e-05 Score=78.64 Aligned_cols=70 Identities=19% Similarity=0.272 Sum_probs=56.2
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-cCCcc----cCC---HHHH-hccCcEEEEEcCChHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-VGGLI----ANS---PAEA-AKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-~G~~~----~~s---~~e~-~~~aDvV~l~vp~~~~~ 216 (988)
|||.|+|+|.+|..+|..|.+.|++|+++|+++++++.+.+ .|..+ .++ +.++ ++++|+|+++++++..-
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 58999999999999999999999999999999999998765 35432 122 2232 56899999999987643
No 250
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=97.80 E-value=1.5e-05 Score=92.54 Aligned_cols=93 Identities=16% Similarity=0.116 Sum_probs=76.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---hhccCCchhhhccccccccCCCCc-chHHHHH-----HhHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQ-FGIHPWVLYDII---SNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFI-----QNLG 70 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~-~Gld~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~-----KDl~ 70 (988)
|+||.+.++++++++|++.|+++ .|+|++.+.+++ +.|.++||+++.+.+.+..+|++. +.++... |+.+
T Consensus 186 mv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~~~S~l~e~~~~~l~~~D~~g~~~ld~i~d~~~~kgtG 265 (484)
T 4gwg_A 186 MVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDTDGKHLLPKIRDSAGQKGTG 265 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCccchHHHHHHHHHhcCCccCCccHHHHhccccCcchH
Confidence 58999999999999999999999 999999999987 688899999999999999888876 5565554 4443
Q ss_pred -HHHHHHHhcCCCCc-HHHHHHHHH
Q 001973 71 -IALDMAKTLAFPLP-LLAVAHQQL 93 (988)
Q Consensus 71 -la~~~a~~~g~~~p-~~~~~~~~~ 93 (988)
...+.|.+.|+|+| +++++...|
T Consensus 266 ~wt~~~A~~~gvp~p~i~~av~~R~ 290 (484)
T 4gwg_A 266 KWTAISALEYGVPVTLIGEAVFARC 290 (484)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHH
Confidence 56678999999999 444444433
No 251
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.79 E-value=3.1e-05 Score=87.35 Aligned_cols=93 Identities=13% Similarity=0.087 Sum_probs=74.9
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..++|+|+|+|.+|..+|..|...|.+|+++|+++.+.......|... .++.++++.+|+|++|..+.. ++. .
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~atgt~~----lI~--~ 291 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQACMDGFRL-VKLNEVIRQVDIVITCTGNKN----VVT--R 291 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCSC----SBC--H
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEECCCCcc----cCC--H
Confidence 347999999999999999999999999999999998776666667654 578999999999999743322 221 2
Q ss_pred chhhhCCCCCEEEecCCCCH
Q 001973 225 GAVSALSSGASIILSSTVSP 244 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p 244 (988)
+....+++|.++|+.+...+
T Consensus 292 e~l~~MK~gailINvgrg~~ 311 (435)
T 3gvp_A 292 EHLDRMKNSCIVCNMGHSNT 311 (435)
T ss_dssp HHHHHSCTTEEEEECSSTTT
T ss_pred HHHHhcCCCcEEEEecCCCc
Confidence 44567889999999987754
No 252
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.78 E-value=0.0011 Score=69.01 Aligned_cols=150 Identities=14% Similarity=0.144 Sum_probs=94.8
Q ss_pred CCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcc
Q 001973 189 GGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPV 268 (988)
Q Consensus 189 G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv 268 (988)
|+.++++..|+++++|++++-+|-....-.++ +.+++++++|.+|.+.+|++|-..-.+-+.+.+ .++.+.+-.=
T Consensus 128 GVkVtsDD~EAvk~AEi~IlftPfG~~t~~Ia---kkii~~lpEgAII~nTCTipp~~ly~~le~l~R--~DvgIsS~HP 202 (358)
T 2b0j_A 128 GLKVTSDDREAVEGADIVITWLPKGNKQPDII---KKFADAIPEGAIVTHACTIPTTKFAKIFKDLGR--EDLNITSYHP 202 (358)
T ss_dssp TCEEESCHHHHHTTCSEEEECCTTCTTHHHHH---HHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTC--TTSEEEECBC
T ss_pred CcEeecchHHHhcCCCEEEEecCCCCCcHHHH---HHHHhhCcCCCEEecccCCCHHHHHHHHHHhCc--ccCCeeccCC
Confidence 67789999999999999999999887555566 688999999999999999999776555554432 3343332210
Q ss_pred cCCcccccCCCeEEEEe-CCHHHHHHHHHHHHhcCCeEEEEeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCC
Q 001973 269 SGGVKRASMGELTIMAA-GTEESLKSTGSVLSALSEKLYVIKGGCGAGSGVKMANQLLAGVHIASAAEAMAFG-ARLGLN 346 (988)
Q Consensus 269 ~g~~~~a~~g~l~~~~g-g~~~~~~~~~~ll~~~g~~v~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la-~~~Gid 346 (988)
+..+.. .|+...--+ .+++..+++.++.+..++..|.+ +..--+.+-=...++.+...+++.+-.... +-.|.+
T Consensus 203 -aaVPgt-~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~v--PAdl~SpV~DMgs~vTAv~~AGiL~Y~~~vtkIlgAP 278 (358)
T 2b0j_A 203 -GCVPEM-KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKM--PANLIGPVCDMCSAVTATVYAGLLAYRDAVTKILGAP 278 (358)
T ss_dssp -SSCTTT-CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEE--EHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred -CCCCCC-CCccccccccCCHHHHHHHHHHHHHhCCCeEec--chhhccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 111111 344221111 37899999999999999999987 322211211112234444455555554343 335555
Q ss_pred H
Q 001973 347 T 347 (988)
Q Consensus 347 ~ 347 (988)
.
T Consensus 279 ~ 279 (358)
T 2b0j_A 279 A 279 (358)
T ss_dssp H
T ss_pred H
Confidence 3
No 253
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.77 E-value=1.9e-05 Score=88.31 Aligned_cols=102 Identities=15% Similarity=0.112 Sum_probs=71.2
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CCcccCCHHHHhc-cCcEEEEEcCChHHHHHHHcc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GGLIANSPAEAAK-DVGVLVIMVTNEAQAESVLYG 222 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~-~aDvV~l~vp~~~~~~~vl~~ 222 (988)
..++|+|+|+|+||..+|+.|.+.|++|+++|+++++++++.+. |+... +..+... +||+++.|.... ++.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~~-----~I~- 244 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALGA-----VLN- 244 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCSC-----CBS-
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchHH-----HhC-
Confidence 34799999999999999999999999999999999998877664 66554 3344444 899999885332 232
Q ss_pred ccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 223 DLGAVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
....+.+ ... +|..++..|.+..+..+.+.+
T Consensus 245 -~~~~~~l-g~~-iV~e~An~p~t~~ea~~~L~~ 275 (364)
T 1leh_A 245 -DFTIPQL-KAK-VIAGSADNQLKDPRHGKYLHE 275 (364)
T ss_dssp -TTHHHHC-CCS-EECCSCSCCBSSHHHHHHHHH
T ss_pred -HHHHHhC-CCc-EEEeCCCCCcccHHHHHHHHh
Confidence 1223444 234 455555556554455566666
No 254
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.77 E-value=0.00011 Score=77.37 Aligned_cols=84 Identities=13% Similarity=0.108 Sum_probs=61.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEE-EeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIG-YDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v-~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
||||+|+|+|.||+.+++.+.+.++++.. +|++++. ..|+.+.++++++. ++|++|-+.+ |..+...+
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~-----~~gv~v~~dl~~l~-~~DVvIDft~-p~a~~~~~---- 71 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA-----TTPYQQYQHIADVK-GADVAIDFSN-PNLLFPLL---- 71 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------CCSCBCSCTTTCT-TCSEEEECSC-HHHHHHHH----
T ss_pred ceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCCceeCCHHHHh-CCCEEEEeCC-hHHHHHHH----
Confidence 47999999999999999999998877554 7988763 35888888998888 9999885553 33344443
Q ss_pred chhhhCCCCCEEEecCCCCH
Q 001973 225 GAVSALSSGASIILSSTVSP 244 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p 244 (988)
. +..|.-+|..+|.-.
T Consensus 72 ---~-l~~g~~vVigTTG~s 87 (243)
T 3qy9_A 72 ---D-EDFHLPLVVATTGEK 87 (243)
T ss_dssp ---T-SCCCCCEEECCCSSH
T ss_pred ---H-HhcCCceEeCCCCCC
Confidence 2 566666666666543
No 255
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.76 E-value=0.0001 Score=82.26 Aligned_cols=109 Identities=17% Similarity=0.113 Sum_probs=80.6
Q ss_pred hcCCCCCeEEEEccc-hHHHHHHHHHHhC--CCeE-EEEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEEcCC
Q 001973 141 AKSNSVTRVGFIGLG-AMGFGMATHLLRS--NFTV-IGYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIMVTN 212 (988)
Q Consensus 141 m~~~~~~kIgiIG~G-~mG~~lA~~L~~~--G~~V-~v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~vp~ 212 (988)
|.+++++||||||+| .||...+..|.+. +.++ .++|+++++.+++.+. |. ...+|++++++ +.|+|++|+|+
T Consensus 13 ~~~~~~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~ 92 (340)
T 1zh8_A 13 MKPLRKIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPV 92 (340)
T ss_dssp ---CCCEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCG
T ss_pred cCCCCceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCc
Confidence 555667899999999 8999999999886 4564 6889999999887654 65 67899999986 58999999998
Q ss_pred hHHHHHHHccccchhhhCCCC-CEEEec-CCCCHHHHHHHHHHHHh
Q 001973 213 EAQAESVLYGDLGAVSALSSG-ASIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 213 ~~~~~~vl~~~~~i~~~l~~g-~ivId~-st~~p~~~~~l~~~l~~ 256 (988)
....+.+. ..+..| .+++.. -+.....++++.+...+
T Consensus 93 ~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 131 (340)
T 1zh8_A 93 ELNLPFIE-------KALRKGVHVICEKPISTDVETGKKVVELSEK 131 (340)
T ss_dssp GGHHHHHH-------HHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred hHHHHHHH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH
Confidence 77555443 223344 455554 24577888888887765
No 256
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.76 E-value=0.00017 Score=82.19 Aligned_cols=139 Identities=16% Similarity=0.174 Sum_probs=87.8
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhC-CCe-EEEEeCChhHHHHHHhc--C----------------------CcccCCHH
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRS-NFT-VIGYDVYRPTLTKFQNV--G----------------------GLIANSPA 197 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~-G~~-V~v~dr~~~~~~~l~~~--G----------------------~~~~~s~~ 197 (988)
+++.||||||+|.||..++..+.+. +.+ +.++|+++++.+.+.+. | ...++|.+
T Consensus 21 ~k~IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~e 100 (446)
T 3upl_A 21 GKPIRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDND 100 (446)
T ss_dssp TCCEEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHH
T ss_pred CCceEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHH
Confidence 3457999999999999999998764 445 66689999998876532 4 34578999
Q ss_pred HHhc--cCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCC-CCHHHHHHHHHHHHhcCCCceEecCcccCCccc
Q 001973 198 EAAK--DVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSST-VSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKR 274 (988)
Q Consensus 198 e~~~--~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st-~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~ 274 (988)
++++ +.|+|++|+|++..-.+.. ...+..|+-|+..+. .......++.+...+. |+
T Consensus 101 eLL~d~dIDaVviaTp~p~~H~e~a------~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~--Gv------------- 159 (446)
T 3upl_A 101 LILSNPLIDVIIDATGIPEVGAETG------IAAIRNGKHLVMMNVEADVTIGPYLKAQADKQ--GV------------- 159 (446)
T ss_dssp HHHTCTTCCEEEECSCCHHHHHHHH------HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHH--TC-------------
T ss_pred HHhcCCCCCEEEEcCCChHHHHHHH------HHHHHcCCcEEecCcccCHHHHHHHHHHHHHh--CC-------------
Confidence 9987 5899999999864322222 234556766664321 1112233444444332 22
Q ss_pred ccCCCeEEEEeCC-HHHHHHHHHHHHhcCCeEEEE
Q 001973 275 ASMGELTIMAAGT-EESLKSTGSVLSALSEKLYVI 308 (988)
Q Consensus 275 a~~g~l~~~~gg~-~~~~~~~~~ll~~~g~~v~~~ 308 (988)
...+..|+ +....++-.+.+.+|.+++..
T Consensus 160 -----vl~~~~gdqp~~~~eLv~~a~~~G~~~v~~ 189 (446)
T 3upl_A 160 -----IYSLGAGDEPSSCMELIEFVSALGYEVVSA 189 (446)
T ss_dssp -----CEEECTTSHHHHHHHHHHHHHHTTCEEEEE
T ss_pred -----eeeecCCcchHHHHHHHHHHHhCCCeEEEe
Confidence 22333455 344556666777788877764
No 257
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.75 E-value=7e-05 Score=82.31 Aligned_cols=70 Identities=20% Similarity=0.202 Sum_probs=52.2
Q ss_pred CCCCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCC--hhHHHH----HHh------cCCcc--cCCHHHHhccCcEEE
Q 001973 143 SNSVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVY--RPTLTK----FQN------VGGLI--ANSPAEAAKDVGVLV 207 (988)
Q Consensus 143 ~~~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~--~~~~~~----l~~------~G~~~--~~s~~e~~~~aDvV~ 207 (988)
+++.+||+|||+|.||.++|..|+.+|+ +|++||++ +++.+. +.. ...++ +++ .+++++||+||
T Consensus 5 ~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDvVI 83 (315)
T 3tl2_A 5 TIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSDVVV 83 (315)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCSEEE
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCCEEE
Confidence 3456799999999999999999999999 99999999 444332 221 11222 334 46789999999
Q ss_pred EEcCCh
Q 001973 208 IMVTNE 213 (988)
Q Consensus 208 l~vp~~ 213 (988)
++...+
T Consensus 84 iaag~p 89 (315)
T 3tl2_A 84 ITAGIA 89 (315)
T ss_dssp ECCSCC
T ss_pred EeCCCC
Confidence 998654
No 258
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.74 E-value=0.00014 Score=83.60 Aligned_cols=106 Identities=14% Similarity=0.139 Sum_probs=80.4
Q ss_pred CCCCeEEEEccch---HHHHHHHHHHhCC-CeEE--EEeCChhHHHHHHhc-CC---cccCCHHHHhcc-------CcEE
Q 001973 144 NSVTRVGFIGLGA---MGFGMATHLLRSN-FTVI--GYDVYRPTLTKFQNV-GG---LIANSPAEAAKD-------VGVL 206 (988)
Q Consensus 144 ~~~~kIgiIG~G~---mG~~lA~~L~~~G-~~V~--v~dr~~~~~~~l~~~-G~---~~~~s~~e~~~~-------aDvV 206 (988)
|+++||||||+|. ||...+..+...+ +++. ++|+++++.+++.+. |+ ...+|++++++. .|+|
T Consensus 35 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V 114 (417)
T 3v5n_A 35 QKRIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAV 114 (417)
T ss_dssp CCCEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEE
T ss_pred CCcceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEE
Confidence 3457999999999 9999999888776 6765 679999999887654 77 578999999876 8999
Q ss_pred EEEcCChHHHHHHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 207 VIMVTNEAQAESVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 207 ~l~vp~~~~~~~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
++|+|+....+.+. ..+..| .+++..- +.....++++.+...+
T Consensus 115 ~I~tp~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 159 (417)
T 3v5n_A 115 AIVTPNHVHYAAAK-------EFLKRGIHVICDKPLTSTLADAKKLKKAADE 159 (417)
T ss_dssp EECSCTTSHHHHHH-------HHHTTTCEEEEESSSCSSHHHHHHHHHHHHH
T ss_pred EECCCcHHHHHHHH-------HHHhCCCeEEEECCCcCCHHHHHHHHHHHHH
Confidence 99999987655443 233445 4555543 6678888888887766
No 259
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.73 E-value=2.9e-05 Score=88.46 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=71.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccC---------------------------CHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIAN---------------------------SPAE 198 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~---------------------------s~~e 198 (988)
..+|+|||+|.+|..+++.+...|.+|+++|+++++.+.+.+.|..... ++.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~e 251 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFAA 251 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHHH
Confidence 3599999999999999999999999999999999998888777876542 2567
Q ss_pred HhccCcEEEEE--cCChHHHHHHHccccchhhhCCCCCEEEecCC
Q 001973 199 AAKDVGVLVIM--VTNEAQAESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 199 ~~~~aDvV~l~--vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
.+..+|+||.+ +|... ...++. ++.+..+++|.+|||++.
T Consensus 252 ~~~~aDvVI~~~~~pg~~-ap~li~--~~~l~~mk~g~vIVdva~ 293 (401)
T 1x13_A 252 QAKEVDIIVTTALIPGKP-APKLIT--REMVDSMKAGSVIVDLAA 293 (401)
T ss_dssp HHHHCSEEEECCCCTTSC-CCCCBC--HHHHHTSCTTCEEEETTG
T ss_pred HhCCCCEEEECCccCCCC-CCeeeC--HHHHhcCCCCcEEEEEcC
Confidence 77889999999 44211 001110 234566789999999885
No 260
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.73 E-value=3.6e-05 Score=74.64 Aligned_cols=103 Identities=13% Similarity=0.120 Sum_probs=72.7
Q ss_pred CCeEEEEcc----chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 146 VTRVGFIGL----GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 146 ~~kIgiIG~----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
..+|+|||+ |.+|..++++|.+.||+ +|++++.. +++ .|..+..|+.|+.+..|++++++|... +.+++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~i--~G~~~y~sl~~l~~~vDlvvi~vp~~~-~~~vv- 94 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EEV--LGRKCYPSVLDIPDKIEVVDLFVKPKL-TMEYV- 94 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SEE--TTEECBSSGGGCSSCCSEEEECSCHHH-HHHHH-
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-CeE--CCeeccCCHHHcCCCCCEEEEEeCHHH-HHHHH-
Confidence 358999999 79999999999999997 66767654 222 477888899998889999999999854 55555
Q ss_pred cccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEe
Q 001973 222 GDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLV 264 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~l 264 (988)
+++...- .+.+|+..++. .+++.+.+.+ .|++++
T Consensus 95 --~~~~~~g-i~~i~~~~g~~----~~~l~~~a~~--~Gi~vv 128 (144)
T 2d59_A 95 --EQAIKKG-AKVVWFQYNTY----NREASKKADE--AGLIIV 128 (144)
T ss_dssp --HHHHHHT-CSEEEECTTCC----CHHHHHHHHH--TTCEEE
T ss_pred --HHHHHcC-CCEEEECCCch----HHHHHHHHHH--cCCEEE
Confidence 3444332 23455443332 4566666665 567766
No 261
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.72 E-value=3.6e-05 Score=86.14 Aligned_cols=104 Identities=15% Similarity=0.153 Sum_probs=75.4
Q ss_pred CeEEEEccchHHHHH-HHHH-Hh-CCCeEE-EEeCChhHHHHHHhc-CCcccCCHHHHhcc--CcEEEEEcCChHHHHHH
Q 001973 147 TRVGFIGLGAMGFGM-ATHL-LR-SNFTVI-GYDVYRPTLTKFQNV-GGLIANSPAEAAKD--VGVLVIMVTNEAQAESV 219 (988)
Q Consensus 147 ~kIgiIG~G~mG~~l-A~~L-~~-~G~~V~-v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~--aDvV~l~vp~~~~~~~v 219 (988)
+||||||+|.||..+ +..+ .. .+++|. ++|+++++.+...+. +....+|+++++++ .|+|++|+|+....+.+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 82 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFEYA 82 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHHHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHHHH
Confidence 699999999999964 4424 33 367766 899998876444333 67778999999876 89999999998766555
Q ss_pred HccccchhhhCCCCCEEEecC--CCCHHHHHHHHHHHHhc
Q 001973 220 LYGDLGAVSALSSGASIILSS--TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~s--t~~p~~~~~l~~~l~~~ 257 (988)
. ..+..|+-|+... +..+..++++.+...+.
T Consensus 83 ~-------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 115 (345)
T 3f4l_A 83 K-------RALEAGKNVLVEKPFTPTLAQAKELFALAKSK 115 (345)
T ss_dssp H-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred H-------HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 4 2334565555444 66788888888877663
No 262
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.72 E-value=0.00013 Score=84.68 Aligned_cols=106 Identities=13% Similarity=0.124 Sum_probs=79.7
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC-CCeE-EEEeCChhHHHHHHh----cC---CcccC----CHHHHhc--cCcEEEEE
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS-NFTV-IGYDVYRPTLTKFQN----VG---GLIAN----SPAEAAK--DVGVLVIM 209 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~----~G---~~~~~----s~~e~~~--~aDvV~l~ 209 (988)
+++||||||+|.||...+..|.+. +++| .++|+++++.+.+.+ .| ....+ |++++++ +.|+|++|
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~ 98 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVS 98 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEEC
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEc
Confidence 457999999999999999999875 5674 688999999887654 35 45566 9999987 58999999
Q ss_pred cCChHHHHHHHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHhc
Q 001973 210 VTNEAQAESVLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQFE 257 (988)
Q Consensus 210 vp~~~~~~~vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~~ 257 (988)
+|+....+.++ ..+..|+ ++++. .+..+..++++.+...+.
T Consensus 99 tp~~~h~~~~~-------~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~ 141 (444)
T 2ixa_A 99 SPWEWHHEHGV-------AAMKAGKIVGMEVSGAITLEECWDYVKVSEQT 141 (444)
T ss_dssp CCGGGHHHHHH-------HHHHTTCEEEECCCCCSSHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHH-------HHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHh
Confidence 99887665554 2233454 55554 356788888888877663
No 263
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.70 E-value=0.0001 Score=82.59 Aligned_cols=107 Identities=13% Similarity=0.087 Sum_probs=76.1
Q ss_pred CCCCCeEEEEccchHHHH-HHHHHHhC-CCeEE-EEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEEcCChHH
Q 001973 143 SNSVTRVGFIGLGAMGFG-MATHLLRS-NFTVI-GYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIMVTNEAQ 215 (988)
Q Consensus 143 ~~~~~kIgiIG~G~mG~~-lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~vp~~~~ 215 (988)
.++|+||||||+|.||.. ++..+.+. +.+|. ++|+++++++++.+. |+ ...+|++++++ +.|+|++|+|+...
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H 99 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQH 99 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGH
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchh
Confidence 345679999999999975 56777765 56754 789999999887764 66 46789999985 47999999999876
Q ss_pred HHHHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 216 AESVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
.+.+. . .+..| .+++..- +.....++++.+...+
T Consensus 100 ~~~~~----~---al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 135 (350)
T 4had_A 100 IEWSI----K---AADAGKHVVCEKPLALKAGDIDAVIAARDR 135 (350)
T ss_dssp HHHHH----H---HHHTTCEEEECSCCCSSGGGGHHHHHHHHH
T ss_pred HHHHH----H---HHhcCCEEEEeCCcccchhhHHHHHHHHHH
Confidence 65554 1 22334 3444432 4556777888777665
No 264
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.69 E-value=0.00014 Score=83.03 Aligned_cols=105 Identities=16% Similarity=0.195 Sum_probs=80.3
Q ss_pred CCCeEEEEccch---HHHHHHHHHHhCC-CeEE--EEeCChhHHHHHHh-cCC---cccCCHHHHhcc-------CcEEE
Q 001973 145 SVTRVGFIGLGA---MGFGMATHLLRSN-FTVI--GYDVYRPTLTKFQN-VGG---LIANSPAEAAKD-------VGVLV 207 (988)
Q Consensus 145 ~~~kIgiIG~G~---mG~~lA~~L~~~G-~~V~--v~dr~~~~~~~l~~-~G~---~~~~s~~e~~~~-------aDvV~ 207 (988)
+++||||||+|. ||...+..+...+ +++. ++|+++++.+.+.+ .|+ ...+|+++++++ .|+|+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 90 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS 90 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE
Confidence 457999999999 9999999988766 6766 57999999988765 477 678999999875 89999
Q ss_pred EEcCChHHHHHHHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHh
Q 001973 208 IMVTNEAQAESVLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 208 l~vp~~~~~~~vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~ 256 (988)
+|+|+....+.+. . .+..|+ +++.. -+.....++++.+...+
T Consensus 91 i~tp~~~H~~~~~----~---al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 134 (398)
T 3dty_A 91 IATPNGTHYSITK----A---ALEAGLHVVCEKPLCFTVEQAENLRELSHK 134 (398)
T ss_dssp EESCGGGHHHHHH----H---HHHTTCEEEECSCSCSCHHHHHHHHHHHHH
T ss_pred ECCCcHHHHHHHH----H---HHHCCCeEEEeCCCcCCHHHHHHHHHHHHH
Confidence 9999987665554 2 223444 44443 25678888888887766
No 265
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.69 E-value=0.00018 Score=81.03 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=79.0
Q ss_pred CCCeEEEEccchHHH-HHHHHHHhCCCe-EEEEeCChhHHHHHHhc-C-CcccCCHHHHhcc--CcEEEEEcCChHHHHH
Q 001973 145 SVTRVGFIGLGAMGF-GMATHLLRSNFT-VIGYDVYRPTLTKFQNV-G-GLIANSPAEAAKD--VGVLVIMVTNEAQAES 218 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~-~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~-G-~~~~~s~~e~~~~--aDvV~l~vp~~~~~~~ 218 (988)
+++||||||+|.+|. .++..+...+.+ |.++|+++++.+.+.+. | ....+|+++++++ .|+|++|+|+....+.
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~ 104 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAEL 104 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHHH
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHHH
Confidence 457999999999994 677778778888 55789999999887765 4 5678999999875 8999999998876555
Q ss_pred HHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 219 VLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 219 vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
+. ..+..| .+++..- +.....++++.+...+
T Consensus 105 ~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 137 (361)
T 3u3x_A 105 AI-------RAMQHGKDVLVDKPGMTSFDQLAKLRRVQAE 137 (361)
T ss_dssp HH-------HHHHTTCEEEEESCSCSSHHHHHHHHHHHHT
T ss_pred HH-------HHHHCCCeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 44 223344 4555542 5667888888887665
No 266
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.69 E-value=0.00012 Score=83.22 Aligned_cols=104 Identities=20% Similarity=0.238 Sum_probs=80.0
Q ss_pred CeEEEEccc-hHHHHHHHHHHhC-CCeE-EEEeCChhHHHHHHhc-CCcccCCHHHHhcc--CcEEEEEcCChHHHHHHH
Q 001973 147 TRVGFIGLG-AMGFGMATHLLRS-NFTV-IGYDVYRPTLTKFQNV-GGLIANSPAEAAKD--VGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 147 ~kIgiIG~G-~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~--aDvV~l~vp~~~~~~~vl 220 (988)
+||||||+| .||..++..|.+. +.++ .++|+++++.+++.+. |+...+|+++++++ .|+|++|+|+....+.+.
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~~~ 82 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEHVV 82 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHHHH
Confidence 699999999 9999999999886 4564 5789999998877654 88888999999874 899999999987655543
Q ss_pred ccccchhhhCCCCC-EEEecC-CCCHHHHHHHHHHHHhc
Q 001973 221 YGDLGAVSALSSGA-SIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 221 ~~~~~i~~~l~~g~-ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
..+..|+ +++..- +..+..++++.+...+.
T Consensus 83 -------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~ 114 (387)
T 3moi_A 83 -------QASEQGLHIIVEKPLTLSRDEADRMIEAVERA 114 (387)
T ss_dssp -------HHHHTTCEEEECSCCCSCHHHHHHHHHHHHHH
T ss_pred -------HHHHCCCceeeeCCccCCHHHHHHHHHHHHHh
Confidence 2233343 555543 66788888888877663
No 267
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.69 E-value=3.3e-05 Score=88.60 Aligned_cols=68 Identities=18% Similarity=0.205 Sum_probs=56.0
Q ss_pred CCCeEEEEccchH--HHHHHHHHHh----CCCeEEEEeCChhHHHHHHhc---------CCcccCCHHHHhccCcEEEEE
Q 001973 145 SVTRVGFIGLGAM--GFGMATHLLR----SNFTVIGYDVYRPTLTKFQNV---------GGLIANSPAEAAKDVGVLVIM 209 (988)
Q Consensus 145 ~~~kIgiIG~G~m--G~~lA~~L~~----~G~~V~v~dr~~~~~~~l~~~---------G~~~~~s~~e~~~~aDvV~l~ 209 (988)
+.|||+|||.|.| |..++..|+. .| +|++||+++++++.+... .++.++|+++++++||+||++
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~a 82 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIIS 82 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEec
Confidence 4579999999995 6899999986 56 999999999887665432 245678999999999999999
Q ss_pred cCCh
Q 001973 210 VTNE 213 (988)
Q Consensus 210 vp~~ 213 (988)
++..
T Consensus 83 irvG 86 (450)
T 3fef_A 83 ILPG 86 (450)
T ss_dssp CCSS
T ss_pred cccC
Confidence 9754
No 268
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.68 E-value=5.4e-05 Score=85.52 Aligned_cols=95 Identities=20% Similarity=0.223 Sum_probs=69.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh-cCCcc------cCCHHHHhccCcEEEEEcCChHH-HH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN-VGGLI------ANSPAEAAKDVGVLVIMVTNEAQ-AE 217 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-~G~~~------~~s~~e~~~~aDvV~l~vp~~~~-~~ 217 (988)
.++|+|+|+|.+|..+++.+...|++|+++||++++.+.+.+ .|... ..++.+.++.+|+||.|++.+.. ..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~~ 245 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKAP 245 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCccccc
Confidence 369999999999999999999999999999999999887765 45432 23455778899999999986541 11
Q ss_pred HHHccccchhhhCCCCCEEEecCCC
Q 001973 218 SVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
.++. +...+.++++.+|||.+..
T Consensus 246 ~li~--~~~l~~mk~gg~iV~v~~~ 268 (369)
T 2eez_A 246 KLVT--RDMLSLMKEGAVIVDVAVD 268 (369)
T ss_dssp CCSC--HHHHTTSCTTCEEEECC--
T ss_pred hhHH--HHHHHhhcCCCEEEEEecC
Confidence 1111 3445667889999999854
No 269
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.68 E-value=4.2e-05 Score=84.60 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=69.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhC-CCe-EEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS-NFT-VIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~-G~~-V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
++||+|||+|+||..++..|.+. +.+ |.++|+++++ .+. .|+...+++++++.++|+|++|+|+....+.+.
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~~~~~--- 76 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DTK-TPVFDVADVDKHADDVDVLFLCMGSATDIPEQA--- 76 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHHHHHH---
T ss_pred CCEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHHHHHH---
Confidence 46999999999999999999887 466 5688998665 222 355556778887788999999999876555443
Q ss_pred cchhhhCCCCCEEEecCCCC--HHHH-HHHHHHH
Q 001973 224 LGAVSALSSGASIILSSTVS--PGFV-SQLERRL 254 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~~--p~~~-~~l~~~l 254 (988)
..+..|+-+++.++.. .... +++.+..
T Consensus 77 ----~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a 106 (320)
T 1f06_A 77 ----PKFAQFACTVDTYDNHRDIPRHRQVMNEAA 106 (320)
T ss_dssp ----HHHTTTSEEECCCCCGGGHHHHHHHHHHHH
T ss_pred ----HHHHCCCEEEECCCCcCCHHHHHHHHHHHH
Confidence 3445677777766543 2333 4444443
No 270
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.67 E-value=0.00012 Score=82.29 Aligned_cols=105 Identities=11% Similarity=0.164 Sum_probs=76.3
Q ss_pred CCCeEEEEccchHHHH-HHHHHHhC-CCeE-EEEeCChhHHHHHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFG-MATHLLRS-NFTV-IGYDVYRPTLTKFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~v 219 (988)
+++||||||+|.||.. .+..|.+. +++| .++|+++++..+. -.+....+|++++++ +.|+|++|+|+....+.+
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~ 82 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRD-FPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHT 82 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHH-CTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHH
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh-CCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHH
Confidence 4579999999999997 67777665 6775 5789999774321 126677899999997 689999999998766555
Q ss_pred HccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHhc
Q 001973 220 LYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 220 l~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
. ..+..| ++++..- +.....++++.+...+.
T Consensus 83 ~-------~al~aGkhVl~EKPla~~~~e~~~l~~~a~~~ 115 (358)
T 3gdo_A 83 M-------ACIQAGKHVVMEKPMTATAEEGETLKRAADEK 115 (358)
T ss_dssp H-------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred H-------HHHHcCCeEEEecCCcCCHHHHHHHHHHHHHc
Confidence 4 223344 4555542 66788888888877663
No 271
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.66 E-value=0.00035 Score=79.77 Aligned_cols=168 Identities=10% Similarity=-0.021 Sum_probs=111.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchhhhccccccccCCCCcchHHHHHHhHHHHHHHHHhcC
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWIFKNYIPNLLRGDAKLHFLNAFIQNLGIALDMAKTLA 80 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~f~l~l~~KDl~la~~~a~~~g 80 (988)
|++|++.+++++.+.|+..++++.|+|++.++++++.-+- .+++.+...|- |.=.-+-||....+ ++..|
T Consensus 234 l~~N~~~a~~Ia~~nEl~~lae~~GiD~~~v~~~~~~dpr-------ig~~~~~pg~G-~GG~C~pkD~~~L~--~~~~~ 303 (432)
T 3pid_A 234 LFANTYLALRVAYFNELDSYAESQGLNSKQIIEGVCLDPR-------IGNHYNNPSFG-YGGYCLPKDTKQLL--ANYES 303 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTT-------TCSSSCCCCSC-CCTTTHHHHHHHHH--HHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCCC-------CCcccCCCCCC-CcccchhhhHHHHH--HHhcC
Confidence 5799999999999999999999999999999999976531 11111111000 22234568877654 34458
Q ss_pred CCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeEEEEccch----
Q 001973 81 FPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRVGFIGLGA---- 156 (988)
Q Consensus 81 ~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kIgiIG~G~---- 156 (988)
++.++.+++.+.=+.... -+++.+.+. ...+|+|+|+-.
T Consensus 304 ~~~~li~~~~~~N~~~~~---------~v~~~i~~~----------------------------~~~~v~vlGlafK~~t 346 (432)
T 3pid_A 304 VPNNIIAAIVDANRTRKD---------FIADSILAR----------------------------KPKVVGVYRLIMKSGS 346 (432)
T ss_dssp SCCSHHHHHHHHHHHHHH---------HHHHHHHHT----------------------------CCSSEEEECC------
T ss_pred CchhHHHHHHHHHHhhHH---------HHHHHHHhh----------------------------cCCEEEEEeeEeCCCC
Confidence 888777777665332221 122222111 013789988753
Q ss_pred ------HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHH
Q 001973 157 ------MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 157 ------mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~v 219 (988)
-...++..|.+.|.+|.+||...... .-.|...++++.++++++|+|++...++. ++++
T Consensus 347 dD~R~Sp~~~i~~~L~~~G~~V~~~DP~~~~~---~~~~~~~~~~~~~~~~~aD~iv~~~~~~~-~~~~ 411 (432)
T 3pid_A 347 DNFRASSIQGIMKRIKAKGIPVIIYEPVMQED---EFFNSRVVRDLNAFKQEADVIISNRMAEE-LADV 411 (432)
T ss_dssp -----CHHHHHHHHHHHTTCCEEEECTTCCSS---EETTEEECCCHHHHHHHCSEEECSSCCGG-GGGG
T ss_pred cchhcChHHHHHHHHHhcCCEEEEECCCCChh---hcCCceEECCHHHHHhcCCEEEECCCChH-HHHH
Confidence 36789999999999999999765321 11255678899999999999998777654 4444
No 272
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=97.65 E-value=2.2e-05 Score=91.59 Aligned_cols=242 Identities=16% Similarity=0.135 Sum_probs=170.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---hhccCCchhhhccccccccCCCCc-chHHHHH-----HhHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQ-FGIHPWVLYDII---SNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFI-----QNLG 70 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~-~Gld~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~-----KDl~ 70 (988)
+++|.+.+..+.+++|++.++++ .|++++.+.+++ +.|..+|++++.+.+.+.++||.+ |.++.+. ||.+
T Consensus 196 l~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~~~~v~~i~D~~~~k~tG 275 (480)
T 2zyd_A 196 MVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTG 275 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCCCCcchHHHHHHHhcCchHH
Confidence 47999999999999999999999 699999999998 558899999998888888899976 8888766 5555
Q ss_pred -HHHHHHHhcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCCeE
Q 001973 71 -IALDMAKTLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVTRV 149 (988)
Q Consensus 71 -la~~~a~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~kI 149 (988)
++.+.|.+.|+|+|+.+.+ .|.+..... + ..
T Consensus 276 ~~~~~~A~~~gv~~Pi~~~a--v~ar~~s~~---k---------------------------------~~---------- 307 (480)
T 2zyd_A 276 KWTSQSALDLGEPLSLITES--VFARYISSL---K---------------------------------DQ---------- 307 (480)
T ss_dssp THHHHHHHHHTCCCHHHHHH--HHHHHHHTC---H---------------------------------HH----------
T ss_pred HHHHHHHHHcCCCCchHHHH--HHHHhhhcc---h---------------------------------hh----------
Confidence 8899999999999988765 122222100 0 00
Q ss_pred EEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccchhhh
Q 001973 150 GFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGAVSA 229 (988)
Q Consensus 150 giIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i~~~ 229 (988)
+.+ ...++
T Consensus 308 -------------------------------R~~--------------------------------~~~~~--------- 315 (480)
T 2zyd_A 308 -------------------------------RVA--------------------------------ASKVL--------- 315 (480)
T ss_dssp -------------------------------HHH--------------------------------HHTTC---------
T ss_pred -------------------------------hHH--------------------------------hhccc---------
Confidence 000 00000
Q ss_pred CCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEEEEe
Q 001973 230 LSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLYVIK 309 (988)
Q Consensus 230 l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~~~~ 309 (988)
..|. .+ +
T Consensus 316 -----------------------------------~g~~----------------------------------~~---~- 322 (480)
T 2zyd_A 316 -----------------------------------SGPQ----------------------------------AQ---P- 322 (480)
T ss_dssp -----------------------------------CCCC----------------------------------CC---C-
T ss_pred -----------------------------------CCCC----------------------------------CC---C-
Confidence 0010 00 0
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhcC-CCccccccccccccCC-CCC----
Q 001973 310 GGCGAGSGVKMANQLLAGVHIASAAEAMAFGAR------LGLNTRVLFNIITDSG-GSSWMFENRVPHMLDN-DYT---- 377 (988)
Q Consensus 310 g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~------~Gid~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~~---- 377 (988)
..+..+.+|.+.|.+.+.++.+++|.+.+.++ .++|...+.++++.|. -.|++++...+.+... +..
T Consensus 323 -~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~l~~ 401 (480)
T 2zyd_A 323 -AGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDACAENPQIANLLL 401 (480)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSSTTCBTHHHHHHHHHHHCTTCSCGGG
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCcchHHHHHHHHHHHHhcCCChHhhhc
Confidence 01345688999999999999999999999877 6899999999998775 5677766443333221 111
Q ss_pred -CCc--hhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhCcc
Q 001973 378 -PYS--ALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSGVK 440 (988)
Q Consensus 378 -~~~--~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~ 440 (988)
+.| .++......+.++..|.+.|+|+|.+.++...|+.-... .-.+.+++..+...|..
T Consensus 402 ~~~f~~~~~~~~~~~r~~v~~a~~~gvp~p~~s~al~~~~~~~~~----~~~~~l~qa~Rd~FG~H 463 (480)
T 2zyd_A 402 APYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAA----VLPANLIQAQRDYFGAH 463 (480)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTCS----SCTHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccC----CchhhHHHHHHHhcCCC
Confidence 112 233444467889999999999999999999987754432 23456888888777653
No 273
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.64 E-value=0.00024 Score=78.28 Aligned_cols=70 Identities=19% Similarity=0.243 Sum_probs=53.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhc-----CCcccCCHHHHhccCcEEEEEcCCh
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTK----FQNV-----GGLIANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----l~~~-----G~~~~~s~~e~~~~aDvV~l~vp~~ 213 (988)
+.+||+|||+|.+|.+++..|+..++ +|.++|+++++++. +.+. ..++..+..+++++||+||++.+.+
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 34799999999999999999998886 89999999887764 2221 2223335577899999999998766
Q ss_pred H
Q 001973 214 A 214 (988)
Q Consensus 214 ~ 214 (988)
.
T Consensus 84 ~ 84 (318)
T 1ez4_A 84 Q 84 (318)
T ss_dssp -
T ss_pred C
Confidence 4
No 274
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=97.62 E-value=0.00019 Score=79.58 Aligned_cols=70 Identities=17% Similarity=0.169 Sum_probs=55.6
Q ss_pred CCCCeEEEEcc-chHHHHHHHHHHhCC--CeEEEEeCChhHHHH----HHhc-----CCcccCCHHHHhccCcEEEEEcC
Q 001973 144 NSVTRVGFIGL-GAMGFGMATHLLRSN--FTVIGYDVYRPTLTK----FQNV-----GGLIANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 144 ~~~~kIgiIG~-G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~----l~~~-----G~~~~~s~~e~~~~aDvV~l~vp 211 (988)
++++||+|||+ |.+|+++|..++..| .+|.++|++.++++. |... .+..++++.+++++||+||++..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 34579999998 999999999999998 589999999887654 4432 23445788889999999999976
Q ss_pred Ch
Q 001973 212 NE 213 (988)
Q Consensus 212 ~~ 213 (988)
.+
T Consensus 86 ~p 87 (343)
T 3fi9_A 86 AP 87 (343)
T ss_dssp --
T ss_pred CC
Confidence 54
No 275
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.62 E-value=0.00012 Score=80.22 Aligned_cols=68 Identities=18% Similarity=0.242 Sum_probs=52.8
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHH----HHHhc------CCccc-CCHHHHhccCcEEEEEcCCh
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLT----KFQNV------GGLIA-NSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~----~l~~~------G~~~~-~s~~e~~~~aDvV~l~vp~~ 213 (988)
|||+|||+|.||.++|..|+..|+ +|.++|+++++++ ++.+. ...+. ++..+++++||+||++.+.+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~~ 80 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGLP 80 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCCC
Confidence 599999999999999999999887 8999999998765 23321 22332 35567889999999998766
Q ss_pred H
Q 001973 214 A 214 (988)
Q Consensus 214 ~ 214 (988)
.
T Consensus 81 ~ 81 (314)
T 3nep_X 81 R 81 (314)
T ss_dssp -
T ss_pred C
Confidence 3
No 276
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.61 E-value=3.8e-05 Score=83.07 Aligned_cols=112 Identities=12% Similarity=0.060 Sum_probs=75.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCC----cccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGG----LIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~----~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
.+++.|+|+|.+|.+++..|++.|. +|++|||++++.+++.+.-. ....++.++..++|+||.|+|.....+...
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~l~~~aDiIInaTp~gm~~~~~~ 205 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPA 205 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCSCEEEEEECSCCCC----CS
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHHhcCCCCEEEEcCcCCCCCCCCC
Confidence 3589999999999999999999996 99999999999888765311 112244555578999999999865332211
Q ss_pred ccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCce-Eec
Q 001973 221 YGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLK-LVD 265 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~-~ld 265 (988)
.. ...++++.+++|+... |..+.-+ +...+ +|.. .++
T Consensus 206 l~----~~~l~~~~~V~DlvY~-P~~T~ll-~~A~~--~G~~~~~~ 243 (281)
T 3o8q_A 206 ID----PVIFSSRSVCYDMMYG-KGYTVFN-QWARQ--HGCAQAID 243 (281)
T ss_dssp CC----GGGEEEEEEEEESCCC-SSCCHHH-HHHHH--TTCSEEEC
T ss_pred CC----HHHhCcCCEEEEecCC-CccCHHH-HHHHH--CCCCEEEC
Confidence 11 2345678999999987 4444433 44444 3444 443
No 277
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.59 E-value=0.00026 Score=69.16 Aligned_cols=92 Identities=11% Similarity=0.118 Sum_probs=62.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCC-hhHHHHHH---hcCCcc----cCC---HHHH-hccCcEEEEEcCCh
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVY-RPTLTKFQ---NVGGLI----ANS---PAEA-AKDVGVLVIMVTNE 213 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~-~~~~~~l~---~~G~~~----~~s---~~e~-~~~aDvV~l~vp~~ 213 (988)
.++|.|+|+|.+|..++..|.+.|++|++.|++ +++.+.+. ..|..+ .++ +.++ ++++|+|+++++++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d 82 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND 82 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence 358999999999999999999999999999998 46555544 334332 122 2333 67899999999987
Q ss_pred HHHHHHHccccchhhhC-CCCCEEEecCC
Q 001973 214 AQAESVLYGDLGAVSAL-SSGASIILSST 241 (988)
Q Consensus 214 ~~~~~vl~~~~~i~~~l-~~g~ivId~st 241 (988)
..-..+. .....+ +...+++..++
T Consensus 83 ~~n~~~~----~~a~~~~~~~~ii~~~~~ 107 (153)
T 1id1_A 83 ADNAFVV----LSAKDMSSDVKTVLAVSD 107 (153)
T ss_dssp HHHHHHH----HHHHHHTSSSCEEEECSS
T ss_pred HHHHHHH----HHHHHHCCCCEEEEEECC
Confidence 6333332 223334 33466665544
No 278
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.59 E-value=0.00013 Score=79.72 Aligned_cols=91 Identities=11% Similarity=0.169 Sum_probs=63.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChh---HHHHHHhc---CCcccCCHHHHhccCcEEEEEcCCh----
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRP---TLTKFQNV---GGLIANSPAEAAKDVGVLVIMVTNE---- 213 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~---~~~~l~~~---G~~~~~s~~e~~~~aDvV~l~vp~~---- 213 (988)
++||+|||+|.||..+|..|+.+|+ +|.++|++++ .+.++... .+..++++ +++++||+||++...+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG~ 92 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSSQ 92 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----C
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCCC
Confidence 4699999999999999999999998 9999999984 22233322 23445677 7789999999997322
Q ss_pred ----------HHHHHHHccccchhhhCCCCCEEEecCC
Q 001973 214 ----------AQAESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 214 ----------~~~~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
..++++. +.+.+.. ++.+++..|+
T Consensus 93 tR~dl~~~n~~i~~~i~---~~i~~~~-p~a~iiv~sN 126 (303)
T 2i6t_A 93 SYLDVVQSNVDMFRALV---PALGHYS-QHSVLLVASQ 126 (303)
T ss_dssp CHHHHHHHHHHHHHHHH---HHHHHHT-TTCEEEECSS
T ss_pred CHHHHHHHHHHHHHHHH---HHHHHhC-CCeEEEEcCC
Confidence 1234444 3455554 6677776666
No 279
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.59 E-value=0.00023 Score=79.41 Aligned_cols=89 Identities=15% Similarity=0.193 Sum_probs=74.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCCh------hHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYR------PTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~------~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
++|+|||.|.-|.+-|.||...|.+|++--|.. ...+...+.|..+. +..|+++.+|+|++-+|+..+. .++
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v~-~~~eA~~~ADvV~~L~PD~~q~-~vy 115 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVG-TYEELIPQADLVINLTPDKQHS-DVV 115 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEEE-EHHHHGGGCSEEEECSCGGGHH-HHH
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEec-CHHHHHHhCCEEEEeCChhhHH-HHH
Confidence 699999999999999999999999999887732 34566777788764 7999999999999999997644 455
Q ss_pred ccccchhhhCCCCCEEEecC
Q 001973 221 YGDLGAVSALSSGASIILSS 240 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~s 240 (988)
+.+.+++++|+++.-..
T Consensus 116 ---~~I~p~lk~G~~L~faH 132 (491)
T 3ulk_A 116 ---RTVQPLMKDGAALGYSH 132 (491)
T ss_dssp ---HHHGGGSCTTCEEEESS
T ss_pred ---HHHHhhCCCCCEEEecC
Confidence 46999999999988544
No 280
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.55 E-value=9.3e-05 Score=83.47 Aligned_cols=103 Identities=17% Similarity=0.149 Sum_probs=69.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc----c--cCCHHHHhccCcEEEEEcCChHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL----I--ANSPAEAAKDVGVLVIMVTNEAQAES 218 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~----~--~~s~~e~~~~aDvV~l~vp~~~~~~~ 218 (988)
++|||.|+|+|.+|+.++..|++ .++|+++|++.++++.+.+..-. + .+++.++++++|+|+.|+|.... ..
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~-~~ 92 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLG-FK 92 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGH-HH
T ss_pred CccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCccc-ch
Confidence 35799999999999999999976 48999999999999887654211 1 12345677899999999987542 22
Q ss_pred HHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
+. + ..+..|+-++|.|-..+ ...++.+...+
T Consensus 93 v~---~---~~~~~g~~yvD~s~~~~-~~~~l~~~a~~ 123 (365)
T 3abi_A 93 SI---K---AAIKSKVDMVDVSFMPE-NPLELRDEAEK 123 (365)
T ss_dssp HH---H---HHHHHTCEEEECCCCSS-CGGGGHHHHHH
T ss_pred HH---H---HHHhcCcceEeeeccch-hhhhhhhhhcc
Confidence 22 1 12335677788775433 33444444444
No 281
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.54 E-value=0.00014 Score=79.99 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=53.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhc-------CCcccCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTK----FQNV-------GGLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----l~~~-------G~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
.+||+|||+|.||.++|..|+..|+ +|.++|+++++++. +.+. .+..++++++ +++||+||++...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG~ 99 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAGA 99 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCCC
Confidence 4799999999999999999999997 89999999887654 2221 1223556665 8999999999765
Q ss_pred h
Q 001973 213 E 213 (988)
Q Consensus 213 ~ 213 (988)
+
T Consensus 100 p 100 (330)
T 3ldh_A 100 R 100 (330)
T ss_dssp C
T ss_pred C
Confidence 4
No 282
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.54 E-value=9e-05 Score=84.12 Aligned_cols=94 Identities=18% Similarity=0.238 Sum_probs=70.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCccc--CC---------------------------H
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIA--NS---------------------------P 196 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~--~s---------------------------~ 196 (988)
..+|+|+|+|.+|...+..+...|.+|++||+++++.+.+.+.|.... +. +
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l 251 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAV 251 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHH
Confidence 359999999999999999999999999999999998888877787544 11 5
Q ss_pred HHHhccCcEEEEEcCChHH-HHHHHccccchhhhCCCCCEEEecCC
Q 001973 197 AEAAKDVGVLVIMVTNEAQ-AESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 197 ~e~~~~aDvV~l~vp~~~~-~~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
.+.+..+|+||.|++.+.. ...++. ++....++++.+|||++.
T Consensus 252 ~~~~~~aDvVi~~~~~pg~~~~~li~--~~~l~~mk~g~vivdva~ 295 (384)
T 1l7d_A 252 LKELVKTDIAITTALIPGKPAPVLIT--EEMVTKMKPGSVIIDLAV 295 (384)
T ss_dssp HHHHTTCSEEEECCCCTTSCCCCCSC--HHHHTTSCTTCEEEETTG
T ss_pred HHHhCCCCEEEECCccCCCCCCeeeC--HHHHhcCCCCCEEEEEec
Confidence 6677899999999933210 001110 233456788999999884
No 283
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.53 E-value=0.00014 Score=81.79 Aligned_cols=104 Identities=15% Similarity=0.166 Sum_probs=76.4
Q ss_pred CCCCeEEEEccchHHHH-HHHHHHhC-CCeE-EEEeCChhHHHHHHhc-CCcccCCHHHHhcc--CcEEEEEcCChHHHH
Q 001973 144 NSVTRVGFIGLGAMGFG-MATHLLRS-NFTV-IGYDVYRPTLTKFQNV-GGLIANSPAEAAKD--VGVLVIMVTNEAQAE 217 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~-lA~~L~~~-G~~V-~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~--aDvV~l~vp~~~~~~ 217 (988)
|+++||||||+|.||.. .+..|.+. +++| .++|+++++.. .+. +....+|+++++++ .|+|++|+|+....+
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~ 80 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSK--ERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYE 80 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGG--TTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHH
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHH--HhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHH
Confidence 34579999999999997 77777765 6775 47899988732 122 56778999999976 899999999987665
Q ss_pred HHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 218 SVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
.+. ..+..| ++++..- +..+..++++.+...+
T Consensus 81 ~~~-------~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~ 114 (362)
T 3fhl_A 81 YAG-------MALEAGKNVVVEKPFTSTTKQGEELIALAKK 114 (362)
T ss_dssp HHH-------HHHHTTCEEEEESSCCSSHHHHHHHHHHHHH
T ss_pred HHH-------HHHHCCCeEEEecCCCCCHHHHHHHHHHHHH
Confidence 554 223334 4566553 6678888888887766
No 284
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.53 E-value=8.4e-05 Score=80.20 Aligned_cols=112 Identities=12% Similarity=0.044 Sum_probs=72.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CC--cc-cCCHHHHhc-cCcEEEEEcCChHHHHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GG--LI-ANSPAEAAK-DVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~--~~-~~s~~e~~~-~aDvV~l~vp~~~~~~~vl 220 (988)
.++|.|+|+|.||.+++..|++.|++|++|||++++.+++.+. +. .. ..+++++.+ ++|+||.++|..... .+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~~~-~~~ 197 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGLSG-GTA 197 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--------
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCCCC-CCC
Confidence 3589999999999999999999999999999999998887643 11 11 123333323 899999999986532 111
Q ss_pred ccccch-hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCce-Eec
Q 001973 221 YGDLGA-VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLK-LVD 265 (988)
Q Consensus 221 ~~~~~i-~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~-~ld 265 (988)
.+ ...+.++.+++|++......+. +.+...+ .|.. +++
T Consensus 198 ----~i~~~~l~~~~~v~D~~y~p~~~t~-ll~~a~~--~G~~~~v~ 237 (272)
T 1p77_A 198 ----SVDAEILKLGSAFYDMQYAKGTDTP-FIALCKS--LGLTNVSD 237 (272)
T ss_dssp ----CCCHHHHHHCSCEEESCCCTTSCCH-HHHHHHH--TTCCCEEC
T ss_pred ----CCCHHHcCCCCEEEEeeCCCCcCCH-HHHHHHH--cCCCEeeC
Confidence 11 1224568899999986544133 3344444 3444 443
No 285
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=97.52 E-value=0.00012 Score=84.63 Aligned_cols=69 Identities=16% Similarity=0.233 Sum_probs=54.5
Q ss_pred CCeEEEEccchH--HHHHHHHHHhC----CCeEEEEeCChhHHHHHHhc--------C----CcccCCHHHHhccCcEEE
Q 001973 146 VTRVGFIGLGAM--GFGMATHLLRS----NFTVIGYDVYRPTLTKFQNV--------G----GLIANSPAEAAKDVGVLV 207 (988)
Q Consensus 146 ~~kIgiIG~G~m--G~~lA~~L~~~----G~~V~v~dr~~~~~~~l~~~--------G----~~~~~s~~e~~~~aDvV~ 207 (988)
+|||+|||+|.| |.+++..|+.. |++|.+||+++++++..... + ++.++++.+++++||+||
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD~VI 82 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 82 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCCEEE
Confidence 469999999996 57678888754 89999999999887653321 1 234678888999999999
Q ss_pred EEcCChH
Q 001973 208 IMVTNEA 214 (988)
Q Consensus 208 l~vp~~~ 214 (988)
+++|...
T Consensus 83 iaagv~~ 89 (480)
T 1obb_A 83 NTAMVGG 89 (480)
T ss_dssp ECCCTTH
T ss_pred ECCCccc
Confidence 9999754
No 286
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.50 E-value=0.00056 Score=75.58 Aligned_cols=70 Identities=20% Similarity=0.254 Sum_probs=54.3
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhc-----CCcccCCHHHHhccCcEEEEEcCCh
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTK----FQNV-----GGLIANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----l~~~-----G~~~~~s~~e~~~~aDvV~l~vp~~ 213 (988)
+.+||+|||+|.+|.+++..|+..++ +|.++|+++++++. +.+. ...+..+..+++++||+||++.+.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 45799999999999999999998886 89999999887754 2221 1223335577899999999998765
Q ss_pred H
Q 001973 214 A 214 (988)
Q Consensus 214 ~ 214 (988)
.
T Consensus 88 ~ 88 (326)
T 2zqz_A 88 Q 88 (326)
T ss_dssp -
T ss_pred C
Confidence 3
No 287
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.50 E-value=0.00025 Score=78.09 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=55.7
Q ss_pred CCCCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhc-----CCcccCCHHHHhccCcEEEEEcC
Q 001973 143 SNSVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTK----FQNV-----GGLIANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 143 ~~~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----l~~~-----G~~~~~s~~e~~~~aDvV~l~vp 211 (988)
++..+||+|||+|.||.++|..|+..|+ +|.++|+++++++. |.+. +....++..+++++||+||++..
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAG 85 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCC
Confidence 3456799999999999999999999987 89999999887763 3321 23334455678899999999987
Q ss_pred ChH
Q 001973 212 NEA 214 (988)
Q Consensus 212 ~~~ 214 (988)
.+.
T Consensus 86 ~~~ 88 (326)
T 3vku_A 86 APQ 88 (326)
T ss_dssp CC-
T ss_pred CCC
Confidence 653
No 288
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.50 E-value=0.00011 Score=86.08 Aligned_cols=87 Identities=18% Similarity=0.112 Sum_probs=76.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHh---hccCCchhhhccccccccCCCCc-chHHHH------HHhH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQF-GIHPWVLYDIIS---NAAGNSWIFKNYIPNLLRGDAKL-HFLNAF------IQNL 69 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~-Gld~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~------~KDl 69 (988)
+++|.+.+..+.+++|++.++++. |++++.+.+++. .+...|++.+.+.+.+..++|.+ |.++.+ .||.
T Consensus 184 l~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~~~~~ld~i~d~~~~k~t~ 263 (482)
T 2pgd_A 184 MVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITASILKFQDADGKHLLPKIRDSAGQKGTG 263 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCTTSSBSGGGSCCCCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcCCCcCchHHHHHhHHhhccCCCCCeeecccccccccccHH
Confidence 478999999999999999999999 999999999985 56688998888888888899887 777776 4677
Q ss_pred HHHHHHHHhcCCCCcHHH
Q 001973 70 GIALDMAKTLAFPLPLLA 87 (988)
Q Consensus 70 ~la~~~a~~~g~~~p~~~ 87 (988)
+.+.++|++.|+|+|+..
T Consensus 264 ~~~~~~A~~~Gv~~P~i~ 281 (482)
T 2pgd_A 264 KWTAISALEYGVPVTLIG 281 (482)
T ss_dssp HHHHHHHHHHTCCCHHHH
T ss_pred HHHHHHHHHcCCCcchHH
Confidence 889999999999999985
No 289
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=97.50 E-value=8e-05 Score=86.93 Aligned_cols=241 Identities=15% Similarity=0.152 Sum_probs=169.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---hccCCchhhhccccccccCCCCc--chHHHHH-----HhH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQ-FGIHPWVLYDIIS---NAAGNSWIFKNYIPNLLRGDAKL--HFLNAFI-----QNL 69 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~-~Gld~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~~--f~l~l~~-----KDl 69 (988)
++||.+.+..+.+++|++.++++ .|++++.+.+++. .+..+|++++...+.+.++||.+ |.++.+. ||.
T Consensus 187 l~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~~~g~~~vd~i~D~~~~k~t 266 (474)
T 2iz1_A 187 MVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGT 266 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBCSSSSSBGGGGBCSCCCCCSH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCCCCCChhHHHHHHHhhcccch
Confidence 47999999999999999999999 7999999999985 57789999998888888889866 6787766 777
Q ss_pred H-HHHHHHHhcCCCCcHHHHH-HHHHHHHhhCcCCCCCchhHHHHHHhhhcccccccccccccCchhhHHHhhhcCCCCC
Q 001973 70 G-IALDMAKTLAFPLPLLAVA-HQQLILGLSHAHANDDNPPLVKVWENVLGVNITDAANLEAYKPEELAKQITAKSNSVT 147 (988)
Q Consensus 70 ~-la~~~a~~~g~~~p~~~~~-~~~~~~a~~~G~g~~D~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~m~~~~~~ 147 (988)
+ .+.+.|++.|+|+|+.+.+ ...+...... ++
T Consensus 267 G~~~~~~A~~~gv~~P~~~~av~ar~~s~~k~--------------------------------------~r-------- 300 (474)
T 2iz1_A 267 GKWTSESALDLGVPLPLITESVFARYISTYKD--------------------------------------ER-------- 300 (474)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHHHHHCHH--------------------------------------HH--------
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHHhhhhhh--------------------------------------hh--------
Confidence 7 7899999999999988765 2222211000 00
Q ss_pred eEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccchh
Q 001973 148 RVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGAV 227 (988)
Q Consensus 148 kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i~ 227 (988)
.. ...++
T Consensus 301 ----------------------------------~~--------------------------------~~~~~------- 307 (474)
T 2iz1_A 301 ----------------------------------VK--------------------------------ASKVL------- 307 (474)
T ss_dssp ----------------------------------HH--------------------------------HHHHC-------
T ss_pred ----------------------------------HH--------------------------------hhhcc-------
Confidence 00 00011
Q ss_pred hhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCcccCCcccccCCCeEEEEeCCHHHHHHHHHHHHhcCCeEEE
Q 001973 228 SALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAPVSGGVKRASMGELTIMAAGTEESLKSTGSVLSALSEKLYV 307 (988)
Q Consensus 228 ~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldapv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~v~~ 307 (988)
..|. .+
T Consensus 308 -------------------------------------~g~~----------------------------------~~--- 313 (474)
T 2iz1_A 308 -------------------------------------SGPA----------------------------------LD--- 313 (474)
T ss_dssp -------------------------------------CCCC----------------------------------CC---
T ss_pred -------------------------------------CCCC----------------------------------Cc---
Confidence 0010 00
Q ss_pred EeCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHHhcC-CCccccccccccccCC-CCC--
Q 001973 308 IKGGCGAGSGVKMANQLLAGVHIASAAEAMAFGAR------LGLNTRVLFNIITDSG-GSSWMFENRVPHMLDN-DYT-- 377 (988)
Q Consensus 308 ~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~la~~------~Gid~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~~-- 377 (988)
+ ..+..+.+|.++|.+.+.++.+++|.+.+.++ .++|...+.++++.|. -.|++++...+.+... +..
T Consensus 314 ~--~~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~Gciirs~~l~~i~~a~~~~~~l~~l 391 (474)
T 2iz1_A 314 F--SGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENL 391 (474)
T ss_dssp C--CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSSCTTCBTTHHHHHHHHHHCTTCCCG
T ss_pred C--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHhcCCChhhh
Confidence 0 01345688999999999999999999999877 6899999999998764 5677766443333221 111
Q ss_pred ---CCc--hhhHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhCcc
Q 001973 378 ---PYS--ALDIFVKDMGIIARECLSQRVPLHISTIAHQLFLAGSAAGWGRQDDAAVVKVYETLSGVK 440 (988)
Q Consensus 378 ---~~~--~l~~~~kDl~~~~~~a~~~gi~~pi~~a~~~~~~~a~~~g~g~~d~~a~~~~~~~~~g~~ 440 (988)
+.| .+.......+.++..|.+.|+|+|.+.++...|+.-.. +.-.+.+++..+...|..
T Consensus 392 ~~~~~~~~~~~~~~~~~r~~v~~a~~~~~p~p~~s~al~~~~~~~~----~~~~~~l~qa~rd~fg~h 455 (474)
T 2iz1_A 392 LLDDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRS----ENLPANLIQAQRDYFGAH 455 (474)
T ss_dssp GGSHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTC----SSCTHHHHHHHHHHHHCC
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccc----CCchhhHHHHHHHhcCCc
Confidence 112 23344455788999999999999999999997665432 233456888888877754
No 290
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=97.50 E-value=0.00022 Score=82.20 Aligned_cols=69 Identities=12% Similarity=0.053 Sum_probs=54.8
Q ss_pred CCeEEEEccchH-HHHHHHHHHhC-----CCeEEEEeCCh--hHHHHHHh--------cC----CcccCCHHHHhccCcE
Q 001973 146 VTRVGFIGLGAM-GFGMATHLLRS-----NFTVIGYDVYR--PTLTKFQN--------VG----GLIANSPAEAAKDVGV 205 (988)
Q Consensus 146 ~~kIgiIG~G~m-G~~lA~~L~~~-----G~~V~v~dr~~--~~~~~l~~--------~G----~~~~~s~~e~~~~aDv 205 (988)
.|||+|||+|.+ |.+++..|+.+ +++|.+||+++ ++++.... .+ +..+++..+++++||+
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~gAD~ 86 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 86 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCCCCE
Confidence 579999999999 88888888874 67899999999 87665221 12 2235788899999999
Q ss_pred EEEEcCChH
Q 001973 206 LVIMVTNEA 214 (988)
Q Consensus 206 V~l~vp~~~ 214 (988)
|+++++.+.
T Consensus 87 VVitagv~~ 95 (450)
T 1s6y_A 87 VTTQFRVGG 95 (450)
T ss_dssp EEECCCTTH
T ss_pred EEEcCCCCC
Confidence 999999754
No 291
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=97.48 E-value=7.4e-05 Score=80.37 Aligned_cols=111 Identities=15% Similarity=0.116 Sum_probs=76.7
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHHHH---HHHc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQAE---SVLY 221 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~~~---~vl~ 221 (988)
+++.|||+|.||.+++..|.+.|. +|++|||++++.+.+.+. +....++.. ..++|+||.|+|...... +..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~~- 196 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMDL- 196 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTSC-
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCCC-
Confidence 489999999999999999999997 799999999999888754 443332322 468999999999754211 000
Q ss_pred cccch-hhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecCc
Q 001973 222 GDLGA-VSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDAP 267 (988)
Q Consensus 222 ~~~~i-~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~ldap 267 (988)
.+ ...+.++.+++|+... |..+ .+.+...+ .|..++++.
T Consensus 197 ---~~~~~~l~~~~~v~DlvY~-P~~T-~ll~~A~~--~G~~~i~Gl 236 (271)
T 1npy_A 197 ---AFPKAFIDNASVAFDVVAM-PVET-PFIRYAQA--RGKQTISGA 236 (271)
T ss_dssp ---SSCHHHHHHCSEEEECCCS-SSSC-HHHHHHHH--TTCEEECHH
T ss_pred ---CCCHHHcCCCCEEEEeecC-CCCC-HHHHHHHH--CCCEEECCH
Confidence 01 1234568899999875 4433 44444444 466666553
No 292
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.48 E-value=0.00048 Score=78.09 Aligned_cols=107 Identities=17% Similarity=0.055 Sum_probs=75.6
Q ss_pred CCCCCeEEEEccchHHHHHHHHHHhC--------CCe-EEEEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEE
Q 001973 143 SNSVTRVGFIGLGAMGFGMATHLLRS--------NFT-VIGYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIM 209 (988)
Q Consensus 143 ~~~~~kIgiIG~G~mG~~lA~~L~~~--------G~~-V~v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~ 209 (988)
.|++.||||||+|.||..-+..+.+. +.+ |-++|+++++.+++.+. |+ ...+|.+++++ +.|+|++|
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~Ia 101 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVT 101 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEEC
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEEC
Confidence 34456999999999999888776542 345 56789999999887764 65 46789999986 47999999
Q ss_pred cCChHHHHHHHccccchhhhCCCC-CEEEec-CCCCHHHHHHHHHHHHh
Q 001973 210 VTNEAQAESVLYGDLGAVSALSSG-ASIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 210 vp~~~~~~~vl~~~~~i~~~l~~g-~ivId~-st~~p~~~~~l~~~l~~ 256 (988)
+|+....+.+. ..+..| ++++.. -+.....++++.+...+
T Consensus 102 tP~~~H~~~a~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~ 143 (393)
T 4fb5_A 102 TPNQFHAEMAI-------AALEAGKHVWCEKPMAPAYADAERMLATAER 143 (393)
T ss_dssp SCGGGHHHHHH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred CChHHHHHHHH-------HHHhcCCeEEEccCCcccHHHHHHhhhhHHh
Confidence 99987666554 223334 445544 25667888888887766
No 293
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.46 E-value=0.00027 Score=81.02 Aligned_cols=106 Identities=17% Similarity=0.151 Sum_probs=78.4
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhCC---------Ce-EEEEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEE
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRSN---------FT-VIGYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIM 209 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~G---------~~-V~v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~ 209 (988)
++++||||||+|.||...+..|.+.+ .+ |-++|+++++++++.+. |+ +..+|.+++++ +.|+|++|
T Consensus 24 s~klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 24 SARLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDIT 103 (412)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEEC
T ss_pred cccceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEEC
Confidence 34579999999999999999887643 35 45789999999887654 65 46789999986 57999999
Q ss_pred cCChHHHHHHHccccchhhhCCCC-CEEEec-CCCCHHHHHHHHHHHHh
Q 001973 210 VTNEAQAESVLYGDLGAVSALSSG-ASIILS-STVSPGFVSQLERRLQF 256 (988)
Q Consensus 210 vp~~~~~~~vl~~~~~i~~~l~~g-~ivId~-st~~p~~~~~l~~~l~~ 256 (988)
+|+....+.++ ..+..| ++++.. -+.....++++.+...+
T Consensus 104 tp~~~H~~~~~-------~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~ 145 (412)
T 4gqa_A 104 SPNHLHYTMAM-------AAIAAGKHVYCEKPLAVNEQQAQEMAQAARR 145 (412)
T ss_dssp SCGGGHHHHHH-------HHHHTTCEEEEESCSCSSHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHH-------HHHHcCCCeEeecCCcCCHHHHHHHHHHHHH
Confidence 99987666554 223334 455554 25667888888877665
No 294
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=97.45 E-value=0.00013 Score=85.18 Aligned_cols=89 Identities=15% Similarity=0.082 Sum_probs=77.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh----hccCCchhhhccccccccCCCCc-chHHHHH-----HhH-
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIIS----NAAGNSWIFKNYIPNLLRGDAKL-HFLNAFI-----QNL- 69 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~----~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~-----KDl- 69 (988)
+++|.+.+..+.+++|++.++++.|++++.+.+++. .+.+.|++.+.+.+.+.++||.. |.++.+. ||.
T Consensus 186 l~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~~G~~~ld~i~D~~~~kgtg 265 (478)
T 1pgj_A 186 MYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDGSYLTEHVMDRIGSKGTG 265 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCCCCCCSHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCCCChhHHHHHHHHhcCccHH
Confidence 468999999999999999999999999999999997 67788998888877777788854 7787777 665
Q ss_pred HHHHHHHHhcCCCCcHHHHH
Q 001973 70 GIALDMAKTLAFPLPLLAVA 89 (988)
Q Consensus 70 ~la~~~a~~~g~~~p~~~~~ 89 (988)
+.+.++|++.|+|+|+.+.+
T Consensus 266 ~~~~~~A~~~Gv~~Pi~~~a 285 (478)
T 1pgj_A 266 LWSAQEALEIGVPAPSLNMA 285 (478)
T ss_dssp HHHHHHHHHHTCCCHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHH
Confidence 69999999999999998873
No 295
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.44 E-value=0.00031 Score=75.66 Aligned_cols=93 Identities=14% Similarity=0.082 Sum_probs=67.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CC--c-ccCCHHHHh-ccCcEEEEEcCChHHHHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GG--L-IANSPAEAA-KDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~--~-~~~s~~e~~-~~aDvV~l~vp~~~~~~~vl 220 (988)
.+++.|+|+|.||.+++..|++.|++|+++||++++.+++.+. +. . ...+..++. ..+|+||.++|.+.. ..+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~-~~~~ 197 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGIS-GDIP 197 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGG-TCCC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCC-CCCC
Confidence 3589999999999999999999999999999999998877643 21 1 122333333 589999999997653 1110
Q ss_pred ccccch-hhhCCCCCEEEecCCCC
Q 001973 221 YGDLGA-VSALSSGASIILSSTVS 243 (988)
Q Consensus 221 ~~~~~i-~~~l~~g~ivId~st~~ 243 (988)
.+ ...++++.+++|++...
T Consensus 198 ----~i~~~~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 198 ----AIPSSLIHPGIYCYDMFYQK 217 (271)
T ss_dssp ----CCCGGGCCTTCEEEESCCCS
T ss_pred ----CCCHHHcCCCCEEEEeccCC
Confidence 11 12356889999999873
No 296
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.42 E-value=0.00076 Score=77.00 Aligned_cols=100 Identities=18% Similarity=0.162 Sum_probs=72.2
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCccc----CCH---HHH-hccCcEEEEEcCChHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIA----NSP---AEA-AKDVGVLVIMVTNEAQAE 217 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~----~s~---~e~-~~~aDvV~l~vp~~~~~~ 217 (988)
.++|.|+|+|.+|..+++.|.+.|++|++.|+++++++.+.+.|..+. ++. .++ ++++|+||++++++....
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~ 83 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNL 83 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHH
Confidence 368999999999999999999999999999999999999998886531 222 222 568999999999977555
Q ss_pred HHHccccchhhhCCCCCEEEecCCCCHHHHHHH
Q 001973 218 SVLYGDLGAVSALSSGASIILSSTVSPGFVSQL 250 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l 250 (988)
.++ .....+.+...||-... .+.....+
T Consensus 84 ~i~----~~ar~~~p~~~Iiara~-~~~~~~~L 111 (413)
T 3l9w_A 84 QLT----EMVKEHFPHLQIIARAR-DVDHYIRL 111 (413)
T ss_dssp HHH----HHHHHHCTTCEEEEEES-SHHHHHHH
T ss_pred HHH----HHHHHhCCCCeEEEEEC-CHHHHHHH
Confidence 444 33444555533433333 34554443
No 297
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.39 E-value=0.00038 Score=77.93 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=72.7
Q ss_pred CeEEEEccchHHH-HHHHHHHhC-CCeE-EEEeCChhHHHHHHh----cCCcccCCHHHHhcc--CcEEEEEcCChHHHH
Q 001973 147 TRVGFIGLGAMGF-GMATHLLRS-NFTV-IGYDVYRPTLTKFQN----VGGLIANSPAEAAKD--VGVLVIMVTNEAQAE 217 (988)
Q Consensus 147 ~kIgiIG~G~mG~-~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~----~G~~~~~s~~e~~~~--aDvV~l~vp~~~~~~ 217 (988)
+||||||+|.||. ..+..|.+. +++| .++|++ +.+++.+ .++...+|+++++++ .|+|++|+|+....+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~--~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLH--VNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYD 80 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTT--CCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHHH
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCC--HHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHHH
Confidence 6999999999999 566667664 5775 478988 3344432 467788999999975 899999999987655
Q ss_pred HHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHh
Q 001973 218 SVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQF 256 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~ 256 (988)
.+. ..+..| +++++.- +..+..++++.+...+
T Consensus 81 ~~~-------~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~ 114 (349)
T 3i23_A 81 LAK-------QAILAGKSVIVEKPFCDTLEHAEELFALGQE 114 (349)
T ss_dssp HHH-------HHHHTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred HHH-------HHHHcCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 544 223344 4555543 5668888888887766
No 298
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=97.36 E-value=0.00015 Score=81.63 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=75.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhC--CCeEE-EEeCChhHHHHHHhc-CCcccCCHHHHhccCcEEEEEcCChHH----HH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS--NFTVI-GYDVYRPTLTKFQNV-GGLIANSPAEAAKDVGVLVIMVTNEAQ----AE 217 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~--G~~V~-v~dr~~~~~~~l~~~-G~~~~~s~~e~~~~aDvV~l~vp~~~~----~~ 217 (988)
+.||+|||+| ||...+..+.+. ++++. ++|+++++.+++.+. |+...+|+++++++.|++++++|+... .+
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~~ 85 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVAGGAGTQ 85 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CTTSHHHH
T ss_pred CCEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcccchhHHH
Confidence 4699999999 899888888775 56755 689999999887654 888889999999999999999998643 11
Q ss_pred HHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 218 SVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
-+ ...+..|+-|+.---..++.++++.+...+
T Consensus 86 ~a-------~~al~aGkhVl~EKPl~~~ea~~l~~~A~~ 117 (372)
T 4gmf_A 86 LA-------RHFLARGVHVIQEHPLHPDDISSLQTLAQE 117 (372)
T ss_dssp HH-------HHHHHTTCEEEEESCCCHHHHHHHHHHHHH
T ss_pred HH-------HHHHHcCCcEEEecCCCHHHHHHHHHHHHH
Confidence 11 122334544444444678888888777666
No 299
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=97.34 E-value=0.00045 Score=79.88 Aligned_cols=111 Identities=15% Similarity=0.154 Sum_probs=75.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-C-Ccc----cC---CHHHHhccCcEEEEEcCChHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-G-GLI----AN---SPAEAAKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G-~~~----~~---s~~e~~~~aDvV~l~vp~~~~~ 216 (988)
+++|.|+|+|.+|..++..|++.|++|+++||++++.+.+.+. + ... .. ++.++++++|+|+.|+|.....
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~ 82 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA 82 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch
Confidence 4689999999999999999999999999999999988876543 1 111 12 3446678999999999864322
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
. +. ...+.+|..+++.+...|.. ..+.+...+ .|+.++.+
T Consensus 83 ~-i~------~a~l~~g~~vvd~~~~~~~~-~~l~~aA~~--aGv~~i~g 122 (450)
T 1ff9_A 83 T-VI------KSAIRQKKHVVTTSYVSPAM-MELDQAAKD--AGITVMNE 122 (450)
T ss_dssp H-HH------HHHHHHTCEEEESSCCCHHH-HHTHHHHHH--TTCEEECS
T ss_pred H-HH------HHHHhCCCeEEEeecccHHH-HHHHHHHHH--CCCeEEeC
Confidence 1 21 11233467788887766665 445555555 45555543
No 300
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=97.34 E-value=0.00057 Score=77.48 Aligned_cols=106 Identities=10% Similarity=0.055 Sum_probs=76.9
Q ss_pred CCCCeEEEEc-cchHHHH-HH----HHHHhCC-CeE----------EEEeCChhHHHHHHh-cCC-cccCCHHHHhcc--
Q 001973 144 NSVTRVGFIG-LGAMGFG-MA----THLLRSN-FTV----------IGYDVYRPTLTKFQN-VGG-LIANSPAEAAKD-- 202 (988)
Q Consensus 144 ~~~~kIgiIG-~G~mG~~-lA----~~L~~~G-~~V----------~v~dr~~~~~~~l~~-~G~-~~~~s~~e~~~~-- 202 (988)
++.+|||||| +|.||.. .+ ..+.+.+ ..+ .++|+++++.+.+.+ .|+ ...+|+++++++
T Consensus 4 ~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~ 83 (383)
T 3oqb_A 4 TQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKN 83 (383)
T ss_dssp CEEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSS
T ss_pred CceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCC
Confidence 3456999999 9999998 77 7776654 222 499999999988765 476 467899999875
Q ss_pred CcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecC--CCCHHHHHHHHHHHHh
Q 001973 203 VGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSS--TVSPGFVSQLERRLQF 256 (988)
Q Consensus 203 aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~s--t~~p~~~~~l~~~l~~ 256 (988)
.|+|++|+|+....+.+. ..+..|+-|+.-. +.....++++.+...+
T Consensus 84 iD~V~i~tp~~~h~~~~~-------~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~ 132 (383)
T 3oqb_A 84 DTMFFDAATTQARPGLLT-------QAINAGKHVYCEKPIATNFEEALEVVKLANS 132 (383)
T ss_dssp CCEEEECSCSSSSHHHHH-------HHHTTTCEEEECSCSCSSHHHHHHHHHHHHH
T ss_pred CCEEEECCCchHHHHHHH-------HHHHCCCeEEEcCCCCCCHHHHHHHHHHHHH
Confidence 899999999876544433 2344555444333 5677888888887766
No 301
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=97.33 E-value=0.00045 Score=76.69 Aligned_cols=102 Identities=15% Similarity=0.142 Sum_probs=74.4
Q ss_pred CCCCCeEEEEccchHHH-HHHHHHHhC-CCe-EEEEeCChhHHHHHHhcCCcccCCHHHHhcc---CcEEEEEcCChHHH
Q 001973 143 SNSVTRVGFIGLGAMGF-GMATHLLRS-NFT-VIGYDVYRPTLTKFQNVGGLIANSPAEAAKD---VGVLVIMVTNEAQA 216 (988)
Q Consensus 143 ~~~~~kIgiIG~G~mG~-~lA~~L~~~-G~~-V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~---aDvV~l~vp~~~~~ 216 (988)
+|+++||||||+|.||. ..+..|.+. +.+ |.++|+++++ .|+...+|+++++++ .|+|++|+|+....
T Consensus 22 ~M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~ 95 (330)
T 4ew6_A 22 SMSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------EGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRY 95 (330)
T ss_dssp CCCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------TTSEEESSHHHHHHHCTTCCEEEECSCHHHHH
T ss_pred cCCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------cCCCccCCHHHHHhCCCCCCEEEEeCCcHHHH
Confidence 34557999999999998 788888875 566 4568999764 477888999999875 89999999987655
Q ss_pred HHHHccccchhhhCCCCC-EEEecC-CCCHHHHHHHHHHHHhc
Q 001973 217 ESVLYGDLGAVSALSSGA-SIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~-ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
+.+. ..+..|+ +++..- +.....++++.+...+.
T Consensus 96 ~~~~-------~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~ 131 (330)
T 4ew6_A 96 EAAY-------KALVAGKHVFLEKPPGATLSEVADLEALANKQ 131 (330)
T ss_dssp HHHH-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHH-------HHHHcCCcEEEeCCCCCCHHHHHHHHHHHHhc
Confidence 4443 2233454 444432 55678888888877663
No 302
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=97.32 E-value=0.0004 Score=75.79 Aligned_cols=108 Identities=16% Similarity=0.068 Sum_probs=75.3
Q ss_pred CCCCeEEEEccchHHHHHHHHHHh----CCCeEE-EEeCChhHHHHHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHH
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLR----SNFTVI-GYDVYRPTLTKFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQA 216 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~----~G~~V~-v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~ 216 (988)
++++||||||+|.||...+..|.+ .+.++. ++|+++.. ...|+. .+|++++++ +.|+|++|+|+....
T Consensus 5 ~~~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a----~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~ 79 (294)
T 1lc0_A 5 SGKFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG----SLDEVR-QISLEDALRSQEIDVAYICSESSSHE 79 (294)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC----EETTEE-BCCHHHHHHCSSEEEEEECSCGGGHH
T ss_pred CCcceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH----HHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHH
Confidence 445799999999999999999875 356644 67886421 122444 478999886 689999999988765
Q ss_pred HHHHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHhcCCCceEec
Q 001973 217 ESVLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQFEGKDLKLVD 265 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~~~~g~~~ld 265 (988)
+.+. ..+..|+ ++++. -+..+..++++.+...+ .|..+..
T Consensus 80 ~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~--~g~~~~~ 121 (294)
T 1lc0_A 80 DYIR-------QFLQAGKHVLVEYPMTLSFAAAQELWELAAQ--KGRVLHE 121 (294)
T ss_dssp HHHH-------HHHHTTCEEEEESCSCSCHHHHHHHHHHHHH--TTCCEEE
T ss_pred HHHH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHH--hCCEEEE
Confidence 5554 2233454 66665 46678889999887766 3444443
No 303
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.31 E-value=0.00065 Score=75.16 Aligned_cols=68 Identities=13% Similarity=0.226 Sum_probs=52.4
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCC--CeEEEEeCChh--HHHHHHhcCC--cc-----cCCHHHHhccCcEEEEEcCCh
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSN--FTVIGYDVYRP--TLTKFQNVGG--LI-----ANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G--~~V~v~dr~~~--~~~~l~~~G~--~~-----~~s~~e~~~~aDvV~l~vp~~ 213 (988)
+|||+|+| +|.+|..++..|+..| ++|.++|++++ .+.++..... .+ ++++.++++++|+||++.+.+
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~~ 87 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVP 87 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCcC
Confidence 46999999 8999999999999999 89999999876 2233443221 11 235678899999999998654
No 304
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.31 E-value=0.00072 Score=74.20 Aligned_cols=101 Identities=16% Similarity=0.165 Sum_probs=68.3
Q ss_pred CeEEEEccchHHHHHHHHHHhCC--CeEEEEeCChhHHHH----HHhc-----CCcccCCHHHHhccCcEEEEEcCChHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSN--FTVIGYDVYRPTLTK----FQNV-----GGLIANSPAEAAKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G--~~V~v~dr~~~~~~~----l~~~-----G~~~~~s~~e~~~~aDvV~l~vp~~~~ 215 (988)
|||+|||+|.+|.+++..|+..+ .+|.++|+++++++. +.+. ...+..+..+++++||+||++.+.+..
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~~ 80 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQR 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCCC
Confidence 59999999999999999999887 689999999887764 2221 122222346779999999999876531
Q ss_pred ---------------HHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHH
Q 001973 216 ---------------AESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLER 252 (988)
Q Consensus 216 ---------------~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~ 252 (988)
++++. +.+.++ .++.+++.. |.+.+..-.+..
T Consensus 81 ~g~~r~dl~~~n~~i~~~i~---~~i~~~-~p~a~iiv~-tNPv~~~t~~~~ 127 (310)
T 2xxj_A 81 PGETRLQLLDRNAQVFAQVV---PRVLEA-APEAVLLVA-TNPVDVMTQVAY 127 (310)
T ss_dssp TTCCHHHHHHHHHHHHHHHH---HHHHHH-CTTCEEEEC-SSSHHHHHHHHH
T ss_pred CCcCHHHHHHhhHHHHHHHH---HHHHHH-CCCcEEEEe-cCchHHHHHHHH
Confidence 23333 334444 456666666 555555444443
No 305
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.28 E-value=0.0006 Score=75.22 Aligned_cols=68 Identities=16% Similarity=0.292 Sum_probs=52.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHHH----HHhcC-------CcccCCHHHHhccCcEEEEEcC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLTK----FQNVG-------GLIANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~~----l~~~G-------~~~~~s~~e~~~~aDvV~l~vp 211 (988)
..+||+|||+|.||.++|..|+.+|+ +|.+||++.++++. |.... ...+++++ .+++||+||++..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~-~~~~aDiVvi~aG 96 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYS-VTANSKLVIITAG 96 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGG-GGTTEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHH-HhCCCCEEEEccC
Confidence 34799999999999999999999997 89999999887654 33321 12245555 5899999999976
Q ss_pred Ch
Q 001973 212 NE 213 (988)
Q Consensus 212 ~~ 213 (988)
.+
T Consensus 97 ~~ 98 (331)
T 4aj2_A 97 AR 98 (331)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 306
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.27 E-value=0.00072 Score=74.34 Aligned_cols=67 Identities=18% Similarity=0.218 Sum_probs=51.1
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCC--CeEEEEeCChhHH--HHHHhcC----Ccc---cCCHHHHhccCcEEEEEcCCh
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSN--FTVIGYDVYRPTL--TKFQNVG----GLI---ANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G--~~V~v~dr~~~~~--~~l~~~G----~~~---~~s~~e~~~~aDvV~l~vp~~ 213 (988)
|||+|||+ |.+|.+++..|+..| ++|.++|+++... .++.+.. +.. +++++++++++|+||++...+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~ 79 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence 59999998 999999999999988 7999999987222 2333221 111 246888999999999998654
No 307
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.27 E-value=0.00046 Score=77.54 Aligned_cols=95 Identities=17% Similarity=0.187 Sum_probs=69.8
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCccc-------CCHHHHhccCcEEEEEcCChHHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIA-------NSPAEAAKDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~-------~s~~e~~~~aDvV~l~vp~~~~~~~v 219 (988)
.+|.|+|+|.+|..++..+...|.+|+++||++++.+.+.+.+.... .+..+.+.++|+||.|++.+......
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~~~ 247 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRAPI 247 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCCCe
Confidence 58999999999999999999999999999999999988876543221 23446677899999999764410000
Q ss_pred HccccchhhhCCCCCEEEecCCC
Q 001973 220 LYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~st~ 242 (988)
+. .+...+.++++.+++|.+..
T Consensus 248 li-~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 248 LV-PASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CB-CHHHHTTSCTTCEEEETTCT
T ss_pred ec-CHHHHhhCCCCCEEEEEecC
Confidence 00 02234567788999998764
No 308
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.00098 Score=77.27 Aligned_cols=111 Identities=15% Similarity=0.205 Sum_probs=77.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhC-CCeEEEEeCChhHHHHHHhc-CCcc----cC---CHHHHhccCcEEEEEcCChHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS-NFTVIGYDVYRPTLTKFQNV-GGLI----AN---SPAEAAKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~-G~~~----~~---s~~e~~~~aDvV~l~vp~~~~~ 216 (988)
+++|.|+|+|.+|.+++..|++. |++|+++||++++.+.+.+. ++.. .. ++.++++++|+||.|+|.....
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~~ 102 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFHP 102 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGHH
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhhH
Confidence 35899999999999999999998 78999999999999888754 3321 11 3456678999999999975422
Q ss_pred HHHHccccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEecC
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLVDA 266 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~lda 266 (988)
.+. ...+..+..++|.+...|... .+.+...+ .|+.++++
T Consensus 103 -~v~------~a~l~~g~~vvd~~~~~p~~~-~Ll~~Ak~--aGv~~i~g 142 (467)
T 2axq_A 103 -NVV------KSAIRTKTDVVTSSYISPALR-ELEPEIVK--AGITVMNE 142 (467)
T ss_dssp -HHH------HHHHHHTCEEEECSCCCHHHH-HHHHHHHH--HTCEEECS
T ss_pred -HHH------HHHHhcCCEEEEeecCCHHHH-HHHHHHHH--cCCEEEec
Confidence 222 112345788889887677653 44444444 34555443
No 309
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=97.25 E-value=0.00058 Score=74.11 Aligned_cols=110 Identities=19% Similarity=0.160 Sum_probs=74.9
Q ss_pred CCCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHH-HHHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHHHHH
Q 001973 144 NSVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTL-TKFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 144 ~~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~-~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~v 219 (988)
.+.+||+|+|+ |.||..+++++.+.|++ .+|..+|.+. ++ ..|.++.+|++|+.+ ..|++++++|.....+.+
T Consensus 5 ~~~~rVaViG~sG~~G~~~~~~l~~~g~~-~V~~V~p~~~g~~--~~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~ 81 (288)
T 2nu8_A 5 DKNTKVICQGFTGSQGTFHSEQAIAYGTK-MVGGVTPGKGGTT--HLGLPVFNTVREAVAATGATASVIYVPAPFCKDSI 81 (288)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCCcccce--eCCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHH
Confidence 34579999998 99999999999998998 4566666432 11 347778889999988 899999999987754444
Q ss_pred HccccchhhhCCCCCEEEecCC-CCHHHHHHHHHHHHhcCCCceEe
Q 001973 220 LYGDLGAVSALSSGASIILSST-VSPGFVSQLERRLQFEGKDLKLV 264 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~st-~~p~~~~~l~~~l~~~~~g~~~l 264 (988)
. +..+. .. +.+|..++ ......+++.+...+ .++.++
T Consensus 82 ~----ea~~~-Gi-~~iVi~t~G~~~~~~~~l~~~A~~--~gv~li 119 (288)
T 2nu8_A 82 L----EAIDA-GI-KLIITITEGIPTLDMLTVKVKLDE--AGVRMI 119 (288)
T ss_dssp H----HHHHT-TC-SEEEECCCCCCHHHHHHHHHHHHH--HTCEEE
T ss_pred H----HHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHH--cCCEEE
Confidence 3 23221 11 34444554 445556677776665 355544
No 310
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.23 E-value=0.00089 Score=73.39 Aligned_cols=98 Identities=9% Similarity=0.116 Sum_probs=66.3
Q ss_pred eEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHH----HHhc------CCc--ccCCHHHHhccCcEEEEEcCChH
Q 001973 148 RVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTK----FQNV------GGL--IANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 148 kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~----l~~~------G~~--~~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
||+|||+|.||.+++..|+..|+ +|.++|+++++++. +.+. ..+ .+++. +++++||+||++.+.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~~ 79 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIGR 79 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCCC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCCC
Confidence 69999999999999999998888 69999999877643 2221 222 23565 68999999999976553
Q ss_pred ---------------HHHHHHccccchhhhCCCCCEEEecCCCCHHHHHHHH
Q 001973 215 ---------------QAESVLYGDLGAVSALSSGASIILSSTVSPGFVSQLE 251 (988)
Q Consensus 215 ---------------~~~~vl~~~~~i~~~l~~g~ivId~st~~p~~~~~l~ 251 (988)
.++++. +.+.+.. ++..++..|+ +.+..-.+.
T Consensus 80 k~G~~r~dl~~~n~~i~~~i~---~~i~~~~-p~a~iiv~tN-Pv~~~t~~~ 126 (308)
T 2d4a_B 80 KPGMTREQLLEANANTMADLA---EKIKAYA-KDAIVVITTN-PVDAMTYVM 126 (308)
T ss_dssp CSSCCTHHHHHHHHHHHHHHH---HHHHHHC-TTCEEEECCS-SHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHHHH---HHHHHHC-CCeEEEEeCC-chHHHHHHH
Confidence 234444 3455554 5666666644 444443333
No 311
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.20 E-value=0.00044 Score=78.95 Aligned_cols=70 Identities=17% Similarity=0.201 Sum_probs=57.9
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHH-hcCCcc--cCCHHHHhccCcEEEEEcCChH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQ-NVGGLI--ANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~-~~G~~~--~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
..++|+|||+|.||..++..|...|. +|+++||++++.+++. +.|+.. .+++.+.+.++|+||.|+|.+.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPH 239 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSS
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCC
Confidence 34699999999999999999999998 8999999999885554 346543 2467778889999999998654
No 312
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.19 E-value=0.00045 Score=74.24 Aligned_cols=93 Identities=13% Similarity=0.059 Sum_probs=67.3
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhc-CC--cccCCHHHHh-ccCcEEEEEcCChHHHHHHHc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNV-GG--LIANSPAEAA-KDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~-G~--~~~~s~~e~~-~~aDvV~l~vp~~~~~~~vl~ 221 (988)
+++.|+|+|.+|.+++..|++.|. +|++++|++++.+++.+. +. ....+..+.. .++|+||.|+|....-+....
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~~~~~DivInaTp~gm~~~~~~i 200 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALEGQSFDIVVNATSASLTADLPPL 200 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGTTCCCSEEEECSSGGGGTCCCCC
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhcccCCCEEEECCCCCCCCCCCCC
Confidence 589999999999999999999995 999999999999888754 21 1112233332 689999999997542110000
Q ss_pred cccchhhhCCCCCEEEecCCCC
Q 001973 222 GDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~ 243 (988)
-...++++.+++|+...+
T Consensus 201 ----~~~~l~~~~~V~DlvY~P 218 (272)
T 3pwz_A 201 ----PADVLGEAALAYELAYGK 218 (272)
T ss_dssp ----CGGGGTTCSEEEESSCSC
T ss_pred ----CHHHhCcCCEEEEeecCC
Confidence 123467899999998773
No 313
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=97.12 E-value=0.00045 Score=72.68 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=70.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeE-EEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTV-IGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V-~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.|||+++|+|+||..+++. . ++++ .+|+ ++..++ |...++|++++++++|+|+-|-+.. ++++.
T Consensus 12 ~~rV~i~G~GaIG~~v~~~--~-~leLv~v~~---~k~gel---gv~a~~d~d~lla~pD~VVe~A~~~-av~e~----- 76 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL--G-NFEKIYAYD---RISKDI---PGVVRLDEFQVPSDVSTVVECASPE-AVKEY----- 76 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH--S-CCSEEEEEC---SSCCCC---SSSEECSSCCCCTTCCEEEECSCHH-HHHHH-----
T ss_pred cceEEEECcCHHHHHHHhc--C-CcEEEEEEe---cccccc---CceeeCCHHHHhhCCCEEEECCCHH-HHHHH-----
Confidence 5899999999999999998 4 7874 6777 443333 7777888998888999999998653 45543
Q ss_pred chhhhCCCCCEEEecCCC---CHHHHHHHHHHHHh
Q 001973 225 GAVSALSSGASIILSSTV---SPGFVSQLERRLQF 256 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~---~p~~~~~l~~~l~~ 256 (988)
+.+.|..|.-+|..|.. .+...+++.+...+
T Consensus 77 -~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~ 110 (253)
T 1j5p_A 77 -SLQILKNPVNYIIISTSAFADEVFRERFFSELKN 110 (253)
T ss_dssp -HHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHT
T ss_pred -HHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHH
Confidence 34567788888888865 55666666666554
No 314
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.10 E-value=0.0012 Score=75.49 Aligned_cols=109 Identities=19% Similarity=0.314 Sum_probs=71.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC----------CCe-EEEEeCChhHHHHHHhcCCcccCCHHHHhc--cCcEEEEEcC
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS----------NFT-VIGYDVYRPTLTKFQNVGGLIANSPAEAAK--DVGVLVIMVT 211 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~----------G~~-V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp 211 (988)
+++||||||+|.||+.++..|.++ +.+ +.++|+++++.+.+. .+....+++.++++ +.|+|+.|+|
T Consensus 9 k~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~-~~~~~~~d~~ell~d~diDvVve~tp 87 (444)
T 3mtj_A 9 KPIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALA-GGLPLTTNPFDVVDDPEIDIVVELIG 87 (444)
T ss_dssp SCEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHH-TTCCEESCTHHHHTCTTCCEEEECCC
T ss_pred CcccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhc-ccCcccCCHHHHhcCCCCCEEEEcCC
Confidence 457999999999999999887642 344 556799998877763 35677889999987 5799999999
Q ss_pred C-hHHHHHHHccccchhhhCCCCCEEEecCC-CCHHHHHHHHHHHHhcCCCceE
Q 001973 212 N-EAQAESVLYGDLGAVSALSSGASIILSST-VSPGFVSQLERRLQFEGKDLKL 263 (988)
Q Consensus 212 ~-~~~~~~vl~~~~~i~~~l~~g~ivId~st-~~p~~~~~l~~~l~~~~~g~~~ 263 (988)
+ ....+.+ ...+..|+-|+.... .......++.+...+ .|..+
T Consensus 88 ~~~~h~~~~-------~~AL~aGKhVvtenkal~a~~~~eL~~~A~~--~gv~l 132 (444)
T 3mtj_A 88 GLEPARELV-------MQAIANGKHVVTANKHLVAKYGNEIFAAAQA--KGVMV 132 (444)
T ss_dssp SSTTHHHHH-------HHHHHTTCEEEECCHHHHHHHHHHHHHHHHH--HTCCE
T ss_pred CchHHHHHH-------HHHHHcCCEEEECCcccCHHHHHHHHHHHHH--hCCeE
Confidence 6 3333322 234456766664433 112234455555554 34544
No 315
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.09 E-value=0.00095 Score=76.72 Aligned_cols=91 Identities=14% Similarity=0.122 Sum_probs=74.0
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..++++|+|+|.+|..+|..|+..|.+|+++|+++.+..+....|..+ .+..++...+|+++.+......+. .
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-~~lee~~~~aDvVi~atG~~~vl~------~ 336 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQV-LTLEDVVSEADIFVTTTGNKDIIM------L 336 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCGGGTTTTCSEEEECSSCSCSBC------H
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-CCHHHHHHhcCEEEeCCCChhhhh------H
Confidence 457999999999999999999999999999999999888887777653 567888899999998876544221 1
Q ss_pred chhhhCCCCCEEEecCCC
Q 001973 225 GAVSALSSGASIILSSTV 242 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~ 242 (988)
.....++++.+|++.+..
T Consensus 337 e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 337 DHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp HHHTTSCTTEEEEESSST
T ss_pred HHHHhcCCCeEEEEcCCC
Confidence 234567889999998865
No 316
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=97.07 E-value=0.00067 Score=74.43 Aligned_cols=91 Identities=15% Similarity=0.147 Sum_probs=62.4
Q ss_pred CCCeEEEEccchHHHHHHHHHHh--CCCe-EEEEeCChhH-HHHH-HhcCCcc-cCCHHHHhc-----cCcEEEEEcCCh
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLR--SNFT-VIGYDVYRPT-LTKF-QNVGGLI-ANSPAEAAK-----DVGVLVIMVTNE 213 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~--~G~~-V~v~dr~~~~-~~~l-~~~G~~~-~~s~~e~~~-----~aDvV~l~vp~~ 213 (988)
+++||||||+|.||..++..|.+ .+.+ +.++|+++++ ...+ ...|... .++.+++++ +.|+||+|+|+.
T Consensus 3 ~~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~ 82 (312)
T 1nvm_B 3 QKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSAS 82 (312)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred CCCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChH
Confidence 34799999999999999999966 3445 5567999887 4444 3456653 456666643 579999999965
Q ss_pred HHHHHHHccccchhhhCCC--CCEEEecCCC
Q 001973 214 AQAESVLYGDLGAVSALSS--GASIILSSTV 242 (988)
Q Consensus 214 ~~~~~vl~~~~~i~~~l~~--g~ivId~st~ 242 (988)
...+... ..+.. |+.|++.+..
T Consensus 83 ~h~~~a~-------~al~a~~Gk~Vi~ekp~ 106 (312)
T 1nvm_B 83 AHVQNEA-------LLRQAKPGIRLIDLTPA 106 (312)
T ss_dssp HHHHHHH-------HHHHHCTTCEEEECSTT
T ss_pred HHHHHHH-------HHHHhCCCCEEEEcCcc
Confidence 5443332 22333 7888877654
No 317
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.06 E-value=0.0014 Score=73.97 Aligned_cols=101 Identities=13% Similarity=0.101 Sum_probs=73.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCC--------Ce-EEEEeCChhHHHHHHhc-CC-cccCCHHHHhc--cCcEEEEEcCC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSN--------FT-VIGYDVYRPTLTKFQNV-GG-LIANSPAEAAK--DVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G--------~~-V~v~dr~~~~~~~l~~~-G~-~~~~s~~e~~~--~aDvV~l~vp~ 212 (988)
+.||||||+|.||...+..+.+.. .+ |.++|+++++++.+.+. |+ +..+|.+++++ +.|+|++|+|+
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~ 85 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPG 85 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCG
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 358999999999999888887642 24 55789999999887654 65 46789999986 47999999999
Q ss_pred hHHHHHHHccccchhhhCCCC-CEEEec-CCCCHHHHHHHHHH
Q 001973 213 EAQAESVLYGDLGAVSALSSG-ASIILS-STVSPGFVSQLERR 253 (988)
Q Consensus 213 ~~~~~~vl~~~~~i~~~l~~g-~ivId~-st~~p~~~~~l~~~ 253 (988)
....+.++ ..+..| ++++.. -+.....++++.+.
T Consensus 86 ~~H~~~~~-------~al~aGkhVl~EKPla~t~~ea~~l~~~ 121 (390)
T 4h3v_A 86 DSHAEIAI-------AALEAGKHVLCEKPLANTVAEAEAMAAA 121 (390)
T ss_dssp GGHHHHHH-------HHHHTTCEEEEESSSCSSHHHHHHHHHH
T ss_pred HHHHHHHH-------HHHHcCCCceeecCcccchhHHHHHHHH
Confidence 88666554 122334 455554 25567788888444
No 318
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.05 E-value=0.0013 Score=72.49 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=75.9
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCe-EEEEeCChhHHHHHHhc--CCcccCCHHHHh-----------ccCcEEEEEc
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFT-VIGYDVYRPTLTKFQNV--GGLIANSPAEAA-----------KDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~--G~~~~~s~~e~~-----------~~aDvV~l~v 210 (988)
|+||||||+ |.||...+..|.+.+.+ |.++|+++++. .+.+. +....++.++++ .+.|+|++|+
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~t 81 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-IIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICS 81 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEECS
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEECC
Confidence 479999999 79999999999998876 56789998763 22222 566778998876 4689999999
Q ss_pred CChHHHHHHHccccchhhhCCCC-CEEEecC-CCCHHHHHHHHHHHHhc
Q 001973 211 TNEAQAESVLYGDLGAVSALSSG-ASIILSS-TVSPGFVSQLERRLQFE 257 (988)
Q Consensus 211 p~~~~~~~vl~~~~~i~~~l~~g-~ivId~s-t~~p~~~~~l~~~l~~~ 257 (988)
|+....+.+. ..+..| +++++.- +..+..++++.+...+.
T Consensus 82 P~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 123 (318)
T 3oa2_A 82 PNYLHYPHIA-------AGLRLGCDVICEKPLVPTPEMLDQLAVIERET 123 (318)
T ss_dssp CGGGHHHHHH-------HHHHTTCEEEECSSCCSCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHH-------HHHHCCCeEEEECCCcCCHHHHHHHHHHHHHh
Confidence 9987655543 222334 4555542 56788888888877663
No 319
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.04 E-value=0.00067 Score=72.71 Aligned_cols=91 Identities=18% Similarity=0.252 Sum_probs=62.0
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhC-CCeEEE-EeCChhHH-----HHHH--hcCCcccCCHHHHhccCcEEEEEcCChHH
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRS-NFTVIG-YDVYRPTL-----TKFQ--NVGGLIANSPAEAAKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~-G~~V~v-~dr~~~~~-----~~l~--~~G~~~~~s~~e~~~~aDvV~l~vp~~~~ 215 (988)
++||+|+| +|.||+.+++.+.+. ++++.. +|++.+.. .++. ..|+.+.++++++++++|+||.+++...
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~a- 85 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPEG- 85 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHHH-
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHHH-
Confidence 47999999 899999999999865 567655 78875321 1111 1266778999999999999999986443
Q ss_pred HHHHHccccchhhhCCCCCEEEecCCCC
Q 001973 216 AESVLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
+.+.+ . ..+..|.-+|..||.-
T Consensus 86 ~~~~~---~---~al~~G~~vVigTTG~ 107 (272)
T 4f3y_A 86 TLVHL---D---AALRHDVKLVIGTTGF 107 (272)
T ss_dssp HHHHH---H---HHHHHTCEEEECCCCC
T ss_pred HHHHH---H---HHHHcCCCEEEECCCC
Confidence 33333 1 2233466666666654
No 320
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.04 E-value=0.0022 Score=70.95 Aligned_cols=68 Identities=15% Similarity=0.270 Sum_probs=52.7
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHhCCC-------eEEEEeCC----hhHHH----HHHhcC------CcccCCHHHHhcc
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLRSNF-------TVIGYDVY----RPTLT----KFQNVG------GLIANSPAEAAKD 202 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~~G~-------~V~v~dr~----~~~~~----~l~~~G------~~~~~s~~e~~~~ 202 (988)
+.|||+|+|+ |.+|++++..|+..|+ +|.++|++ .++.+ ++.+.. +...++..+++++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKD 83 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCC
Confidence 4579999998 9999999999999885 89999999 54443 244321 1234678899999
Q ss_pred CcEEEEEcCC
Q 001973 203 VGVLVIMVTN 212 (988)
Q Consensus 203 aDvV~l~vp~ 212 (988)
||+||++...
T Consensus 84 aD~Vi~~ag~ 93 (329)
T 1b8p_A 84 ADVALLVGAR 93 (329)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEeCCC
Confidence 9999998653
No 321
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.04 E-value=0.0011 Score=69.47 Aligned_cols=90 Identities=8% Similarity=0.088 Sum_probs=64.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc----cCCHH---HH-hccCcEEEEEcCChHHHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI----ANSPA---EA-AKDVGVLVIMVTNEAQAE 217 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~----~~s~~---e~-~~~aDvV~l~vp~~~~~~ 217 (988)
.++|.|+|+|.+|..++..|.+.|+ |+++|+++++++.+. .|..+ .++.. ++ ++++|.|+++++++..-.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 86 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 86 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHH
Confidence 3689999999999999999999999 999999999998887 66542 22222 23 578999999999875333
Q ss_pred HHHccccchhhhCCCC-CEEEecCC
Q 001973 218 SVLYGDLGAVSALSSG-ASIILSST 241 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g-~ivId~st 241 (988)
.+. .....+.++ .+++..++
T Consensus 87 ~~~----~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 87 HCI----LGIRKIDESVRIIAEAER 107 (234)
T ss_dssp HHH----HHHHHHCSSSEEEEECSS
T ss_pred HHH----HHHHHHCCCCeEEEEECC
Confidence 332 233445555 56665544
No 322
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.01 E-value=0.0016 Score=71.66 Aligned_cols=104 Identities=17% Similarity=0.133 Sum_probs=75.8
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCe-EEEEeCChhHHHHHHhc--CCcccCCHHHHh----------ccCcEEEEEcC
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFT-VIGYDVYRPTLTKFQNV--GGLIANSPAEAA----------KDVGVLVIMVT 211 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~-V~v~dr~~~~~~~l~~~--G~~~~~s~~e~~----------~~aDvV~l~vp 211 (988)
|+||||||+ |.||...+..|.+.+.+ |.++|+++++. .+.+. +....++.++++ .+.|+|++|+|
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~tP 81 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-LVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIASP 81 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-GGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECSC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-HHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECCC
Confidence 479999999 78999999999998877 56789998873 22222 566788898887 57899999999
Q ss_pred ChHHHHHHHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHhc
Q 001973 212 NEAQAESVLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQFE 257 (988)
Q Consensus 212 ~~~~~~~vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~~ 257 (988)
+....+.+. ..+..|+ +++.. -+..+..++++.+...+.
T Consensus 82 ~~~H~~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 122 (312)
T 3o9z_A 82 NHLHYPQIR-------MALRLGANALSEKPLVLWPEEIARLKELEART 122 (312)
T ss_dssp GGGHHHHHH-------HHHHTTCEEEECSSSCSCHHHHHHHHHHHHHH
T ss_pred chhhHHHHH-------HHHHCCCeEEEECCCCCCHHHHHHHHHHHHHc
Confidence 987655443 2233444 44443 256788888888877663
No 323
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.99 E-value=0.0013 Score=71.07 Aligned_cols=95 Identities=14% Similarity=0.050 Sum_probs=69.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhc------CC--ccc--CCHHHHhccCcEEEEEcCChH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNV------GG--LIA--NSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~------G~--~~~--~s~~e~~~~aDvV~l~vp~~~ 214 (988)
.+++.|+|+|.+|.+++..|++.|. +|+++||++++.+++.+. +. ... +++.+.+.++|+||-|+|...
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~Gm 206 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMGM 206 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTTS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCCC
Confidence 3589999999999999999999998 799999999998876542 11 122 377788889999999998532
Q ss_pred HHHHHHccccchhhhCCCCCEEEecCCCC
Q 001973 215 QAESVLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 215 ~~~~vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
.-..-. .--...++++.+++|+.-.+
T Consensus 207 ~~~~~~---pi~~~~l~~~~~v~DlvY~P 232 (283)
T 3jyo_A 207 PAHPGT---AFDVSCLTKDHWVGDVVYMP 232 (283)
T ss_dssp TTSCSC---SSCGGGCCTTCEEEECCCSS
T ss_pred CCCCCC---CCCHHHhCCCCEEEEecCCC
Confidence 110000 00123467889999998754
No 324
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.92 E-value=0.0012 Score=70.96 Aligned_cols=103 Identities=16% Similarity=0.101 Sum_probs=66.1
Q ss_pred CCCCeEEEEc-cchHHHHHHHHHHhC-CCeE-EEEeCChhH-----HHHHH---hcCCcccCCHHHHhccCcEEEEEcCC
Q 001973 144 NSVTRVGFIG-LGAMGFGMATHLLRS-NFTV-IGYDVYRPT-----LTKFQ---NVGGLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 144 ~~~~kIgiIG-~G~mG~~lA~~L~~~-G~~V-~v~dr~~~~-----~~~l~---~~G~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
++++||+|+| +|.||+.+++.+.+. ++++ -++|+++.. +.++. ..|+.+++++++++.++|+||-+.+.
T Consensus 19 ~~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~p 98 (288)
T 3ijp_A 19 PGSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQP 98 (288)
T ss_dssp --CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSCH
T ss_pred cCCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCCH
Confidence 3457999999 999999999998754 6774 456887432 11121 24677889999999999999988754
Q ss_pred hHHHHHHHccccchhhhCCCCCEEEecCCCC-HHHHHHHHHH
Q 001973 213 EAQAESVLYGDLGAVSALSSGASIILSSTVS-PGFVSQLERR 253 (988)
Q Consensus 213 ~~~~~~vl~~~~~i~~~l~~g~ivId~st~~-p~~~~~l~~~ 253 (988)
.. +.+.+ ...+..|.-+|..||.- +....++.+.
T Consensus 99 ~a-~~~~~------~~~l~~Gv~vViGTTG~~~e~~~~L~~a 133 (288)
T 3ijp_A 99 QA-SVLYA------NYAAQKSLIHIIGTTGFSKTEEAQIADF 133 (288)
T ss_dssp HH-HHHHH------HHHHHHTCEEEECCCCCCHHHHHHHHHH
T ss_pred HH-HHHHH------HHHHHcCCCEEEECCCCCHHHHHHHHHH
Confidence 33 33332 12234566677766654 3343344443
No 325
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=96.87 E-value=0.0021 Score=69.62 Aligned_cols=110 Identities=20% Similarity=0.147 Sum_probs=72.9
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHHHHHHc
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~vl~ 221 (988)
+.+||+|+|+ |.||..+++++.+.|++ .+|..+|..... ...|.++.+|+.|+.+ .+|++++++|.... .+++
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~-~v~~VnP~~~g~-~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~-~~~~- 81 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTK-IVAGVTPGKGGM-EVLGVPVYDTVKEAVAHHEVDASIIFVPAPAA-ADAA- 81 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTC-EETTEEEESSHHHHHHHSCCSEEEECCCHHHH-HHHH-
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCe-EEEEECCCCCCc-eECCEEeeCCHHHHhhcCCCCEEEEecCHHHH-HHHH-
Confidence 4579999998 99999999999999999 445655543100 1247788899999988 89999999998664 3333
Q ss_pred cccchhhhCCCCCEEEecCCC-CHHHHHHHHHHHHhcCCCceEe
Q 001973 222 GDLGAVSALSSGASIILSSTV-SPGFVSQLERRLQFEGKDLKLV 264 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~-~p~~~~~l~~~l~~~~~g~~~l 264 (988)
++..+. .- +.+|..++. .....+++.+...+ .++.++
T Consensus 82 --~ea~~~-Gi-~~vVi~t~G~~~~~~~~l~~~a~~--~gi~vi 119 (288)
T 1oi7_A 82 --LEAAHA-GI-PLIVLITEGIPTLDMVRAVEEIKA--LGSRLI 119 (288)
T ss_dssp --HHHHHT-TC-SEEEECCSCCCHHHHHHHHHHHHH--HTCEEE
T ss_pred --HHHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHH--cCCEEE
Confidence 233322 11 324444544 44445566666655 355544
No 326
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.84 E-value=0.0024 Score=66.71 Aligned_cols=68 Identities=13% Similarity=0.126 Sum_probs=54.7
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCC-cc-----cCCHHHHhccCcEEEEEcCC
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGG-LI-----ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~-~~-----~~s~~e~~~~aDvV~l~vp~ 212 (988)
+.|+|.|.|. |.+|..+++.|++.|++|++.+|++++.+.+...++ .. .+++.+++.++|+||.+...
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 4579999997 999999999999999999999999999988877665 32 24455666777888777653
No 327
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.82 E-value=0.0017 Score=74.06 Aligned_cols=88 Identities=10% Similarity=0.074 Sum_probs=60.4
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC---eEEEEeCChhHHHHHHhc-------CCcc-------cCCHHHHhcc--CcEEE
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF---TVIGYDVYRPTLTKFQNV-------GGLI-------ANSPAEAAKD--VGVLV 207 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~l~~~-------G~~~-------~~s~~e~~~~--aDvV~ 207 (988)
+||.|+|+|.+|..++..|++.|. +|.++||++++.+++.+. .+.. .+++.+++++ +|+||
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVi 81 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVL 81 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEE
Confidence 599999999999999999999983 899999999998876542 1211 1234455666 78888
Q ss_pred EEcCChHHHHHHHccccchhhhCCCCCEEEecCC
Q 001973 208 IMVTNEAQAESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 208 l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
.|.|.... ..+. + ..+..|.-++|.+.
T Consensus 82 n~ag~~~~-~~v~---~---a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 82 NIALPYQD-LTIM---E---ACLRTGVPYLDTAN 108 (405)
T ss_dssp ECSCGGGH-HHHH---H---HHHHHTCCEEESSC
T ss_pred ECCCcccC-hHHH---H---HHHHhCCCEEEecC
Confidence 88875432 2222 1 12234566777644
No 328
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.81 E-value=0.0016 Score=69.09 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=62.3
Q ss_pred CCCeEEEEccch-HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 145 SVTRVGFIGLGA-MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 145 ~~~kIgiIG~G~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
...++.|||.|. +|.++|..|...|.+|++++++ +.++++.++++|+||.+++.+.. +.
T Consensus 149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~--------------t~~L~~~~~~ADIVI~Avg~p~~----I~-- 208 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK--------------TKDIGSMTRSSKIVVVAVGRPGF----LN-- 208 (276)
T ss_dssp CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHHHSSEEEECSSCTTC----BC--
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC--------------cccHHHhhccCCEEEECCCCCcc----cc--
Confidence 346999999985 8999999999999999999864 46788899999999999998652 21
Q ss_pred cchhhhCCCCCEEEecCCC
Q 001973 224 LGAVSALSSGASIILSSTV 242 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~ 242 (988)
..++++|.+|||.+..
T Consensus 209 ---~~~vk~GavVIDvgi~ 224 (276)
T 3ngx_A 209 ---REMVTPGSVVIDVGIN 224 (276)
T ss_dssp ---GGGCCTTCEEEECCCE
T ss_pred ---HhhccCCcEEEEeccC
Confidence 2346899999998875
No 329
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.78 E-value=0.00054 Score=73.71 Aligned_cols=99 Identities=15% Similarity=0.192 Sum_probs=61.6
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHh-CCCeEE-EEeCChhHH--HHH------HhcCCcccCCHHHHhccCcEEEEEcCCh
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLR-SNFTVI-GYDVYRPTL--TKF------QNVGGLIANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~-~G~~V~-v~dr~~~~~--~~l------~~~G~~~~~s~~e~~~~aDvV~l~vp~~ 213 (988)
++|||+|+|+ |.||..++..+.+ .|+++. ++|+++++. ..+ ...++...++++++++++|+|+-+.+.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~p- 82 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRP- 82 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCH-
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCCh-
Confidence 4479999998 9999999998874 578876 788876431 111 112445567788888899999955543
Q ss_pred HHHHHHHccccchhhhCCCCCEEEecCC-CCHHHHHHH
Q 001973 214 AQAESVLYGDLGAVSALSSGASIILSST-VSPGFVSQL 250 (988)
Q Consensus 214 ~~~~~vl~~~~~i~~~l~~g~ivId~st-~~p~~~~~l 250 (988)
....+.+ ...+..|.-+|..+| ..+....++
T Consensus 83 ~~~~~~~------~~a~~~G~~vVigTtG~~~e~~~~L 114 (273)
T 1dih_A 83 EGTLNHL------AFCRQHGKGMVIGTTGFDEAGKQAI 114 (273)
T ss_dssp HHHHHHH------HHHHHTTCEEEECCCCCCHHHHHHH
T ss_pred HHHHHHH------HHHHhCCCCEEEECCCCCHHHHHHH
Confidence 3334333 122334555665554 444443333
No 330
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.77 E-value=0.0017 Score=70.45 Aligned_cols=93 Identities=9% Similarity=-0.012 Sum_probs=65.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CC--------c-ccCCHHHHhccCcEEEEEcCChHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GG--------L-IANSPAEAAKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~--------~-~~~s~~e~~~~aDvV~l~vp~~~~ 215 (988)
.+++.|+|.|.+|.+++..|++.| +|+++||+.++.+++.+. +. . ...+..+....+|+||.+++....
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~~~ 206 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMY 206 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTTCT
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCCCC
Confidence 358999999999999999999999 999999999888776532 10 0 011224556789999999986542
Q ss_pred H--HHHHccccchhhhCCCCCEEEecCCC
Q 001973 216 A--ESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 216 ~--~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
- +..... -...+.++.+++|++..
T Consensus 207 ~~~~~~~~~---~~~~l~~~~~v~Dv~y~ 232 (287)
T 1nvt_A 207 PNIDVEPIV---KAEKLREDMVVMDLIYN 232 (287)
T ss_dssp TCCSSCCSS---CSTTCCSSSEEEECCCS
T ss_pred CCCCCCCCC---CHHHcCCCCEEEEeeeC
Confidence 1 000000 12456789999999985
No 331
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.73 E-value=0.0017 Score=72.21 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=72.1
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEE-EEeCCh-hHHHHHHh----cC--CcccCCHHHHhcc--CcEEEEEcCChHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVI-GYDVYR-PTLTKFQN----VG--GLIANSPAEAAKD--VGVLVIMVTNEAQA 216 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~-v~dr~~-~~~~~l~~----~G--~~~~~s~~e~~~~--aDvV~l~vp~~~~~ 216 (988)
+||||||+|.+|...+..| ..+.+|. ++|+++ ++.+.+.+ .| ....+|+++++++ .|+|++|+|+....
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~ 81 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSLNG 81 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHHHH
T ss_pred eEEEEEccchhHHHHHHhc-CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcchHH
Confidence 6999999999998888877 6677755 689887 34444332 24 3678899999874 89999999987755
Q ss_pred HHHHccccchhhhCCCCC-EEEec-CCCCHHHHHHHHHHHHhc
Q 001973 217 ESVLYGDLGAVSALSSGA-SIILS-STVSPGFVSQLERRLQFE 257 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~-ivId~-st~~p~~~~~l~~~l~~~ 257 (988)
+.+. ..+..|+ +++.. -+.....++++.+...+.
T Consensus 82 ~~~~-------~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~ 117 (337)
T 3ip3_A 82 KILL-------EALERKIHAFVEKPIATTFEDLEKIRSVYQKV 117 (337)
T ss_dssp HHHH-------HHHHTTCEEEECSSSCSSHHHHHHHHHHHHHH
T ss_pred HHHH-------HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 5443 2233443 44443 255678888888877663
No 332
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.72 E-value=0.0035 Score=69.53 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=54.8
Q ss_pred CeEEEEccchHHHHHHHHHHhCC-CeE-EEEeCChhHHHHHHh-cC------------------CcccCCHHHHhccCcE
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSN-FTV-IGYDVYRPTLTKFQN-VG------------------GLIANSPAEAAKDVGV 205 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G-~~V-~v~dr~~~~~~~l~~-~G------------------~~~~~s~~e~~~~aDv 205 (988)
+||||+|+|.||..+++.|.+.. .+| .+.|++++....+.+ .| ..+..++.+++.++|+
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~vDv 82 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI 82 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCCCE
Confidence 59999999999999999998764 464 556888777765543 23 2445688888889999
Q ss_pred EEEEcCChHHHHH
Q 001973 206 LVIMVTNEAQAES 218 (988)
Q Consensus 206 V~l~vp~~~~~~~ 218 (988)
|++|+|.....+.
T Consensus 83 V~~aTp~~~h~~~ 95 (334)
T 2czc_A 83 IVDATPGGIGAKN 95 (334)
T ss_dssp EEECCSTTHHHHH
T ss_pred EEECCCccccHHH
Confidence 9999998764443
No 333
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.71 E-value=0.00036 Score=76.15 Aligned_cols=89 Identities=17% Similarity=0.088 Sum_probs=64.4
Q ss_pred CCeEEEEccchH-HHHHHHHHHhCCCeEEEEeCChhH----HHHHHhcCCcc-----c--CCHHHHhccCcEEEEEcCCh
Q 001973 146 VTRVGFIGLGAM-GFGMATHLLRSNFTVIGYDVYRPT----LTKFQNVGGLI-----A--NSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 146 ~~kIgiIG~G~m-G~~lA~~L~~~G~~V~v~dr~~~~----~~~l~~~G~~~-----~--~s~~e~~~~aDvV~l~vp~~ 213 (988)
..++.|||.|.| |..+|..|...|.+|++.||+..+ .+.+...-... + .++.+.+.++|+||.+++.+
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p 256 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVPSE 256 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECCCCC
Confidence 469999999976 999999999999999999998332 22221111111 2 46788999999999999976
Q ss_pred HHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 214 AQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 214 ~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
.- ++. ...+++|.+|||.+..
T Consensus 257 ~~---vI~-----~e~vk~GavVIDVgi~ 277 (320)
T 1edz_A 257 NY---KFP-----TEYIKEGAVCINFACT 277 (320)
T ss_dssp TC---CBC-----TTTSCTTEEEEECSSS
T ss_pred cc---eeC-----HHHcCCCeEEEEcCCC
Confidence 41 121 2335789999999864
No 334
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.71 E-value=0.011 Score=65.30 Aligned_cols=114 Identities=19% Similarity=0.210 Sum_probs=72.5
Q ss_pred CCeEEEEccchHHHH-HHHHHHhCCCeEEEEeCCh--hHHHHHHhcCCccc--CCHHHHh-ccCcEEEEEc--C-ChHHH
Q 001973 146 VTRVGFIGLGAMGFG-MATHLLRSNFTVIGYDVYR--PTLTKFQNVGGLIA--NSPAEAA-KDVGVLVIMV--T-NEAQA 216 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~-lA~~L~~~G~~V~v~dr~~--~~~~~l~~~G~~~~--~s~~e~~-~~aDvV~l~v--p-~~~~~ 216 (988)
++||.|||.|.+|.+ +|+.|.+.|++|+++|+++ ...+.|.+.|+.+. .++.+.. .++|+|+.+- | +...+
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~~~p~~ 83 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVV 83 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCTTCHHH
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCCCCHHH
Confidence 469999999999995 9999999999999999864 35677888888654 3445544 4799999863 2 22223
Q ss_pred HHHHc------cccch-hhhC-CCCCEEEecCCCCHHHHH-HHHHHHHhcCC
Q 001973 217 ESVLY------GDLGA-VSAL-SSGASIILSSTVSPGFVS-QLERRLQFEGK 259 (988)
Q Consensus 217 ~~vl~------~~~~i-~~~l-~~g~ivId~st~~p~~~~-~l~~~l~~~~~ 259 (988)
+.... +.-++ ...+ +...+|..+.|..-.|+. -++..+...+.
T Consensus 84 ~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g~ 135 (326)
T 3eag_A 84 EAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGL 135 (326)
T ss_dssp HHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcCC
Confidence 33221 00112 2222 233456666565555555 45666666443
No 335
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.71 E-value=0.0028 Score=68.20 Aligned_cols=65 Identities=15% Similarity=0.188 Sum_probs=52.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc----cCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI----ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~----~~s~~e~~~~aDvV~l~vp~ 212 (988)
+|||.|.|+|.+|+.++..|.+.||+|++.+|++++.+.+...++.. .+++. +.++|+||-+...
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence 36999999999999999999999999999999999888877666432 12222 5678888877753
No 336
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.70 E-value=0.002 Score=74.76 Aligned_cols=70 Identities=23% Similarity=0.294 Sum_probs=55.7
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CCcc----cCC---HHHH-hccCcEEEEEcCChH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GGLI----ANS---PAEA-AKDVGVLVIMVTNEA 214 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~----~~s---~~e~-~~~aDvV~l~vp~~~ 214 (988)
+.|||-|+|+|.+|..+|+.|.+.||+|++.|.++++++.+.+. +... .++ +.++ +++||+++.+++++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 45799999999999999999999999999999999999988753 4432 222 2333 578999887777764
No 337
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.69 E-value=0.0029 Score=70.74 Aligned_cols=96 Identities=13% Similarity=0.140 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCchh--hhc-cccccccCCCCc--chHHHHHHhH----HHHHHH
Q 001973 5 LLEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSWI--FKN-YIPNLLRGDAKL--HFLNAFIQNL----GIALDM 75 (988)
Q Consensus 5 ~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~~--~~~-~~~~~~~~~~~~--f~l~l~~KDl----~la~~~ 75 (988)
........++.|++.++++.|++++.+.+.+..+...++. .+. ..+.|+.+.+.| +....+.||+ +.+.++
T Consensus 229 ~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~~~~~~~D~~~~~g~~~~~ 308 (359)
T 1bg6_A 229 SVGSLAEKVDAERIAIAKAFDLNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINLNTRYFFEDVSTGLVPLSEL 308 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSSCCHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCCCccceecCcCccHHHHHHH
Confidence 3456778899999999999999999999988776554442 011 123355444445 4445899999 899999
Q ss_pred HHhcCCCCcHHHHHHHHHHHHhhCc
Q 001973 76 AKTLAFPLPLLAVAHQQLILGLSHA 100 (988)
Q Consensus 76 a~~~g~~~p~~~~~~~~~~~a~~~G 100 (988)
|+++|+|+|+.+.+.+.++.....+
T Consensus 309 a~~~gv~~P~~~~l~~~~~~~~~~~ 333 (359)
T 1bg6_A 309 GRAVNVPTPLIDAVLDLISSLIDTD 333 (359)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHTTCC
T ss_pred HHHcCCCchHHHHHHHHHHHHHCCC
Confidence 9999999999999999998776553
No 338
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.66 E-value=0.0023 Score=70.99 Aligned_cols=90 Identities=12% Similarity=0.133 Sum_probs=60.7
Q ss_pred CeEEEEccchHHHHHHHHHHhC-CCeE-EEEeCChhHHHHHHh-------------------cCCcccCCHHHHhccCcE
Q 001973 147 TRVGFIGLGAMGFGMATHLLRS-NFTV-IGYDVYRPTLTKFQN-------------------VGGLIANSPAEAAKDVGV 205 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~-G~~V-~v~dr~~~~~~~l~~-------------------~G~~~~~s~~e~~~~aDv 205 (988)
+||||+|+|+||..+++.|.++ ++++ .+.|++++....+.. .++.+..++.+...++|+
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~vDv 81 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI 81 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCCCE
Confidence 5999999999999999999874 4565 445777554433222 233333466777789999
Q ss_pred EEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCC
Q 001973 206 LVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 206 V~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
||.|+|.....+... .++..|..||+.+...
T Consensus 82 V~~atp~~~~~~~a~-------~~l~aG~~VId~sp~~ 112 (337)
T 1cf2_P 82 VIDCTPEGIGAKNLK-------MYKEKGIKAIFQGGEK 112 (337)
T ss_dssp EEECCSTTHHHHHHH-------HHHHHTCCEEECTTSC
T ss_pred EEECCCchhhHHHHH-------HHHHcCCEEEEecCCC
Confidence 999999876443321 2233466688877764
No 339
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=96.58 E-value=0.0039 Score=67.74 Aligned_cols=109 Identities=18% Similarity=0.155 Sum_probs=74.2
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHH-HHHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHHHHHH
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTL-TKFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~-~~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~vl 220 (988)
...+|.|+|+ |.||..++++|.+.|++ .+|..+|.+. ++ -.|.++..|+.++.+ .+|++++++|.....+.+.
T Consensus 12 ~~~~v~V~Gasg~~G~~~~~~l~~~g~~-~V~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~v~ 88 (294)
T 2yv1_A 12 ENTKAIVQGITGRQGSFHTKKMLECGTK-IVGGVTPGKGGQN--VHGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVF 88 (294)
T ss_dssp TTCCEEEETTTSHHHHHHHHHHHHTTCC-EEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHhCCCe-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCEEEEccCHHHHHHHHH
Confidence 3468999999 99999999999999999 6677777642 11 147788899999988 8999999999876444332
Q ss_pred ccccchhhhCCCCCEEEecCC-CCHHHHHHHHHHHHhcCCCceEe
Q 001973 221 YGDLGAVSALSSGASIILSST-VSPGFVSQLERRLQFEGKDLKLV 264 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~st-~~p~~~~~l~~~l~~~~~g~~~l 264 (988)
+..+. .. +.+|..++ ......+++.+...+ .++.++
T Consensus 89 ----ea~~~-Gi-~~vVi~t~G~~~~~~~~l~~~A~~--~gi~vi 125 (294)
T 2yv1_A 89 ----EAIDA-GI-ELIVVITEHIPVHDTMEFVNYAED--VGVKII 125 (294)
T ss_dssp ----HHHHT-TC-SEEEECCSCCCHHHHHHHHHHHHH--HTCEEE
T ss_pred ----HHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHH--cCCEEE
Confidence 33332 11 32444444 444455667666655 355544
No 340
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.57 E-value=0.0024 Score=71.12 Aligned_cols=88 Identities=13% Similarity=0.067 Sum_probs=57.6
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHh--------cCCcccCCHHHHhccCcEEEEEcCChHH
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQN--------VGGLIANSPAEAAKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~--------~G~~~~~s~~e~~~~aDvV~l~vp~~~~ 215 (988)
++||+|+| .|++|..+.+.|.++.+ ++.....+.+.-.++.+ ....+ .+..+ ..++|+||+|+|....
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~-~~~~~-~~~vDvV~~a~g~~~s 81 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKF-VPPEK-LEPADILVLALPHGVF 81 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBC-BCGGG-CCCCSEEEECCCTTHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccc-cchhH-hcCCCEEEEcCCcHHH
Confidence 47999999 79999999999998764 76665543322111111 11122 23333 4789999999998764
Q ss_pred HHHHHccccchhhhCCCCCEEEecCCC
Q 001973 216 AESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
.+.+ ..++..|..|||.|+-
T Consensus 82 ~~~a-------~~~~~aG~~VId~Sa~ 101 (345)
T 2ozp_A 82 AREF-------DRYSALAPVLVDLSAD 101 (345)
T ss_dssp HHTH-------HHHHTTCSEEEECSST
T ss_pred HHHH-------HHHHHCCCEEEEcCcc
Confidence 3322 2334678899999974
No 341
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.57 E-value=0.0026 Score=68.31 Aligned_cols=75 Identities=15% Similarity=0.178 Sum_probs=60.6
Q ss_pred CCCeEEEEccch-HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHH--HHhccCcEEEEEcCChHHHHHHHc
Q 001973 145 SVTRVGFIGLGA-MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPA--EAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 145 ~~~kIgiIG~G~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~--e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
...++.|||.|. +|.++|..|...|.+|++++++.. +++ +.++++|+||.+++.+.. +.
T Consensus 164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~--------------~l~l~~~~~~ADIVI~Avg~p~~----I~ 225 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS--------------TEDMIDYLRTADIVIAAMGQPGY----VK 225 (300)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC--------------HHHHHHHHHTCSEEEECSCCTTC----BC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC--------------CchhhhhhccCCEEEECCCCCCC----Cc
Confidence 346999999887 799999999999999999997432 344 788999999999997652 21
Q ss_pred cccchhhhCCCCCEEEecCCC
Q 001973 222 GDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~ 242 (988)
...+++|.+|||.+..
T Consensus 226 -----~~~vk~GavVIDvgi~ 241 (300)
T 4a26_A 226 -----GEWIKEGAAVVDVGTT 241 (300)
T ss_dssp -----GGGSCTTCEEEECCCE
T ss_pred -----HHhcCCCcEEEEEecc
Confidence 2346899999998865
No 342
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=96.56 E-value=0.008 Score=61.69 Aligned_cols=66 Identities=17% Similarity=0.114 Sum_probs=51.9
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc-----cCCHHHHhccCcEEEEEcCCh
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI-----ANSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-----~~s~~e~~~~aDvV~l~vp~~ 213 (988)
|||.|.| .|.+|..++..|++.|++|++.+|++++.+.+. .++.. .+...+++.++|+||.+...+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 5899999 599999999999999999999999998887664 34321 111126778899999888653
No 343
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=96.56 E-value=0.0038 Score=67.56 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=49.4
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC--eEEEEeCChhHHH----HHHhc----C--C--cccCCHHHHhccCcEEEEEcCC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF--TVIGYDVYRPTLT----KFQNV----G--G--LIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~~----~l~~~----G--~--~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
|||+|||+|.+|+++|..|+.++. ++.+||+++++++ +|.+. + . ...++. +.+++||+|+++-..
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~-~~~~~aDvVvitAG~ 79 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY-SLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCG-GGGTTCSEEEECCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCH-HHhCCCCEEEEecCC
Confidence 699999999999999999998874 7999999986543 34331 1 1 123344 568899999998764
Q ss_pred h
Q 001973 213 E 213 (988)
Q Consensus 213 ~ 213 (988)
+
T Consensus 80 p 80 (294)
T 2x0j_A 80 A 80 (294)
T ss_dssp C
T ss_pred C
Confidence 4
No 344
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.55 E-value=0.003 Score=67.98 Aligned_cols=91 Identities=5% Similarity=-0.110 Sum_probs=64.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcC-CcccCCHHHHhccCcEEEEEcCChHHH--HHHHcc
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVG-GLIANSPAEAAKDVGVLVIMVTNEAQA--ESVLYG 222 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G-~~~~~s~~e~~~~aDvV~l~vp~~~~~--~~vl~~ 222 (988)
.++.|+|+|.+|.+++..|.+.|. +|++++|++++++++.+.= ....+++.+ + ++|+||.++|....- ....
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~p-- 198 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGESP-- 198 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCCS--
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccCC--
Confidence 589999999999999999999998 8999999999998876531 111122223 3 899999999863210 0000
Q ss_pred ccchhhhCCCCCEEEecCCCC
Q 001973 223 DLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st~~ 243 (988)
--...++++.+++|+--..
T Consensus 199 --i~~~~l~~~~~v~DlvY~P 217 (282)
T 3fbt_A 199 --VDKEVVAKFSSAVDLIYNP 217 (282)
T ss_dssp --SCHHHHTTCSEEEESCCSS
T ss_pred --CCHHHcCCCCEEEEEeeCC
Confidence 0123356789999987654
No 345
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.52 E-value=0.0011 Score=69.65 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=48.9
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCC-CeEEEEeCChhHHHHHHhcCCcc-------cCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSN-FTVIGYDVYRPTLTKFQNVGGLI-------ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G-~~V~v~dr~~~~~~~l~~~G~~~-------~~s~~e~~~~aDvV~l~vp~ 212 (988)
|++|.|.| .|.+|..++..|++.| ++|++++|++++.+.+...++.. .+++.++++.+|+||.+...
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 46899999 6999999999999999 99999999988765433222211 12334556777888777654
No 346
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.50 E-value=0.0054 Score=63.27 Aligned_cols=66 Identities=11% Similarity=0.075 Sum_probs=52.7
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc-----cCCHHHHhccCcEEEEEcCC
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI-----ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-----~~s~~e~~~~aDvV~l~vp~ 212 (988)
|||.|.|. |.+|..++..|++.|++|++.+|++++.+.+...++.. .+...+++.++|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 58999997 99999999999999999999999999888775555432 11112677889999988754
No 347
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=96.49 E-value=0.01 Score=64.81 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=49.8
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCC--eEEEEeC--ChhHHHH----HHhc-----CCcccCCHHHHhccCcEEEEEcCC
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNF--TVIGYDV--YRPTLTK----FQNV-----GGLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~--~V~v~dr--~~~~~~~----l~~~-----G~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
|||+|+| +|.+|++++..|+..|+ ++.++|+ ++++++. +.+. ...+..+..++++++|+||++...
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag~ 80 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAGI 80 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCCC
Confidence 5999999 99999999999998886 7999999 8765432 2221 122222336778999999999864
Q ss_pred h
Q 001973 213 E 213 (988)
Q Consensus 213 ~ 213 (988)
+
T Consensus 81 ~ 81 (303)
T 1o6z_A 81 P 81 (303)
T ss_dssp C
T ss_pred C
Confidence 4
No 348
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.48 E-value=0.0075 Score=66.89 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=59.4
Q ss_pred CeEEEEccchHHHHHHHHHHhCC-CeE-EEEeCChhHHHHHH-hcCCcc-----------------cCCHHHHhccCcEE
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSN-FTV-IGYDVYRPTLTKFQ-NVGGLI-----------------ANSPAEAAKDVGVL 206 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G-~~V-~v~dr~~~~~~~l~-~~G~~~-----------------~~s~~e~~~~aDvV 206 (988)
+||||+|+|+||..+++.|.++. .+| .+.|++++....+. ..|... .+++++..+++|+|
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred eEEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 58999999999999999998764 454 45688766554333 224333 22444555679999
Q ss_pred EEEcCChHHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 207 VIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 207 ~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
|.|+|.....+.. ..++..|..+|+.|.-
T Consensus 82 ~~aTp~~~s~~~a-------~~~~~aG~kvV~~sa~ 110 (340)
T 1b7g_O 82 VDTTPNGVGAQYK-------PIYLQLQRNAIFQGGE 110 (340)
T ss_dssp EECCSTTHHHHHH-------HHHHHTTCEEEECTTS
T ss_pred EECCCCchhHHHH-------HHHHHcCCeEEEeCCC
Confidence 9999986643322 1233457778887765
No 349
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=96.47 E-value=0.0052 Score=66.84 Aligned_cols=111 Identities=18% Similarity=0.131 Sum_probs=74.1
Q ss_pred CCCCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHH-HHHHhcCCcccCCHHHHhc--c-CcEEEEEcCChHHHH
Q 001973 143 SNSVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTL-TKFQNVGGLIANSPAEAAK--D-VGVLVIMVTNEAQAE 217 (988)
Q Consensus 143 ~~~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~-~~l~~~G~~~~~s~~e~~~--~-aDvV~l~vp~~~~~~ 217 (988)
.....+|.|+|+ |.||..++++|.+.|++ .+|..+|.+. ++ -.|.++.+|+.++.+ . +|++++++|.....+
T Consensus 10 ~~~~~~vvV~Gasg~~G~~~~~~l~~~g~~-~v~~VnP~~~g~~--i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~ 86 (297)
T 2yv2_A 10 VDSETRVLVQGITGREGSFHAKAMLEYGTK-VVAGVTPGKGGSE--VHGVPVYDSVKEALAEHPEINTSIVFVPAPFAPD 86 (297)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHCTTCCEEEECCCGGGHHH
T ss_pred hCCCCEEEEECCCCCHHHHHHHHHHhCCCc-EEEEeCCCCCCce--ECCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHH
Confidence 344568999998 99999999999999999 6667666542 11 147888899999887 5 999999999876444
Q ss_pred HHHccccchhhhCCCCCEEEecCCC-CHHHHHHHHHHHHhcCCCceEe
Q 001973 218 SVLYGDLGAVSALSSGASIILSSTV-SPGFVSQLERRLQFEGKDLKLV 264 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~ivId~st~-~p~~~~~l~~~l~~~~~g~~~l 264 (988)
.+. +..+. .. +.+|..|+. .....+++.+...+ .++.++
T Consensus 87 ~v~----ea~~~-Gi-~~vVi~t~G~~~~~~~~l~~~A~~--~gi~vi 126 (297)
T 2yv2_A 87 AVY----EAVDA-GI-RLVVVITEGIPVHDTMRFVNYARQ--KGATII 126 (297)
T ss_dssp HHH----HHHHT-TC-SEEEECCCCCCHHHHHHHHHHHHH--HTCEEE
T ss_pred HHH----HHHHC-CC-CEEEEECCCCCHHHHHHHHHHHHH--cCCEEE
Confidence 332 33332 11 324444544 44445667666655 355544
No 350
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.46 E-value=0.0043 Score=69.41 Aligned_cols=89 Identities=13% Similarity=0.111 Sum_probs=58.9
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHh-----cC-----CcccCCHHHHhccCcEEEEEcCC
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQN-----VG-----GLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~-----~G-----~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
+++||+|+| .|++|..+.+.|.++.. ++.......+.-.++.. .| ..+. + ++..+++|+||+|+|.
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~-~-~~~~~~vDvVf~atp~ 92 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSV-K-DADFSTVDAVFCCLPH 92 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCG-G-GCCGGGCSEEEECCCT
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceec-c-hhHhcCCCEEEEcCCc
Confidence 346999999 89999999999998764 77766543322112211 11 1121 1 3445689999999998
Q ss_pred hHHHHHHHccccchhhhCCCCCEEEecCCCC
Q 001973 213 EAQAESVLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 213 ~~~~~~vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
....+.+- .+ ..|..+||.|+-.
T Consensus 93 ~~s~~~a~-------~~-~aG~~VId~sa~~ 115 (359)
T 1xyg_A 93 GTTQEIIK-------EL-PTALKIVDLSADF 115 (359)
T ss_dssp TTHHHHHH-------TS-CTTCEEEECSSTT
T ss_pred hhHHHHHH-------HH-hCCCEEEECCccc
Confidence 76544332 33 5688999999853
No 351
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.42 E-value=0.0064 Score=70.36 Aligned_cols=113 Identities=15% Similarity=0.104 Sum_probs=72.0
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCCh----hHHHHHHhcCCccc--CCHHHHhcc-CcEEEEEcCCh---H
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYR----PTLTKFQNVGGLIA--NSPAEAAKD-VGVLVIMVTNE---A 214 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~----~~~~~l~~~G~~~~--~s~~e~~~~-aDvV~l~vp~~---~ 214 (988)
+.++|.|||+|..|.+.|+.|.+.|++|+++|+++ ...+.|.+.|+.+. ..+.+...+ +|+|+++..-+ .
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~~p 87 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNP 87 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECTTSCTTSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECCcCCCCCh
Confidence 45799999999999999999999999999999854 34567888888653 234445566 89998874322 2
Q ss_pred HHHHHHc------cccchhhhCCCCCEEEecCCCCHHHHHH-HHHHHHhc
Q 001973 215 QAESVLY------GDLGAVSALSSGASIILSSTVSPGFVSQ-LERRLQFE 257 (988)
Q Consensus 215 ~~~~vl~------~~~~i~~~l~~g~ivId~st~~p~~~~~-l~~~l~~~ 257 (988)
.+..... +.-+++..+.+..+|..+.|..-.|+.. ++..+...
T Consensus 88 ~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~ 137 (451)
T 3lk7_A 88 MVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAG 137 (451)
T ss_dssp HHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 2222211 1112222233455666666665555554 45666553
No 352
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=96.40 E-value=0.0049 Score=66.22 Aligned_cols=75 Identities=19% Similarity=0.135 Sum_probs=62.7
Q ss_pred CCeEEEEccch-HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGA-MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..++.|||.|. +|.++|..|...|.+|++.+++ +.++.+.++++|+||.+++.+.. +.
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~~----I~--- 223 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK--------------TAHLDEEVNKGDILVVATGQPEM----VK--- 223 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTTC----BC---
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC--------------cccHHHHhccCCEEEECCCCccc----CC---
Confidence 47999999996 7999999999999999999854 45788899999999999998662 21
Q ss_pred chhhhCCCCCEEEecCCCC
Q 001973 225 GAVSALSSGASIILSSTVS 243 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~ 243 (988)
...+++|.+|||.+...
T Consensus 224 --~~~vk~GavVIDVgi~~ 240 (301)
T 1a4i_A 224 --GEWIKPGAIVIDCGINY 240 (301)
T ss_dssp --GGGSCTTCEEEECCCBC
T ss_pred --HHHcCCCcEEEEccCCC
Confidence 23467999999998864
No 353
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.40 E-value=0.01 Score=65.31 Aligned_cols=117 Identities=20% Similarity=0.305 Sum_probs=69.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhC---------CCe-EEEEeCChhHHH------HHHh--cCCcccC--CHHHHhc--cC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS---------NFT-VIGYDVYRPTLT------KFQN--VGGLIAN--SPAEAAK--DV 203 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~---------G~~-V~v~dr~~~~~~------~l~~--~G~~~~~--s~~e~~~--~a 203 (988)
|+||||||+|.||+.++..|.++ +.+ +-++|+++++.+ .+.. ......+ |+.++++ +.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~i 81 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSADY 81 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSCC
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCCC
Confidence 36999999999999999999875 445 455688754321 1211 1223444 8999886 48
Q ss_pred cEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCHH--HHHHHHHHHHhcCCCceEe-cCcc
Q 001973 204 GVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSPG--FVSQLERRLQFEGKDLKLV-DAPV 268 (988)
Q Consensus 204 DvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~--~~~~l~~~l~~~~~g~~~l-dapv 268 (988)
|+|+.|+|+.....+.. +-+...+..|+-|+..+. .|- ...++.+...+ .+..++ .+.+
T Consensus 82 DvVv~~tp~~~h~~~a~---~~~~~aL~aGkhVv~~NK-kpla~~~~eL~~~A~~--~g~~~~~ea~v 143 (327)
T 3do5_A 82 DVLIEASVTRVDGGEGV---NYIREALKRGKHVVTSNK-GPLVAEFHGLMSLAER--NGVRLMYEATV 143 (327)
T ss_dssp SEEEECCCCC----CHH---HHHHHHHTTTCEEEECCS-HHHHHHHHHHHHHHHH--TTCCEECGGGS
T ss_pred CEEEECCCCcccchhHH---HHHHHHHHCCCeEEecCc-hhhHHHHHHHHHHHHh--hCCcEEEEEEe
Confidence 99999999864210011 122445667877776544 332 34455555444 455543 3443
No 354
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.38 E-value=0.023 Score=59.83 Aligned_cols=87 Identities=18% Similarity=0.278 Sum_probs=55.2
Q ss_pred CeEEEEcc-chHHHHHHHHHHhC-CCeEE-EEeCChhHHHHHHhcCCcccCCHHHHhc-cCcEEEEEcCChHHHHHHHcc
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRS-NFTVI-GYDVYRPTLTKFQNVGGLIANSPAEAAK-DVGVLVIMVTNEAQAESVLYG 222 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~-G~~V~-v~dr~~~~~~~l~~~G~~~~~s~~e~~~-~aDvV~l~vp~~~~~~~vl~~ 222 (988)
|||+|+|+ |.||+.++..+.+. ++++. ++|++ +++.++.. .+|+++-+.+... +.+.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl~~~~~~~~DvvIDfT~p~a-~~~~~-- 62 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPLSLLTDGNTEVVIDFTHPDV-VMGNL-- 62 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCTHHHHHTTCCEEEECSCTTT-HHHHH--
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCHHHHhccCCcEEEEccChHH-HHHHH--
Confidence 48999996 99999999999865 89976 55664 34555554 7899996664433 34333
Q ss_pred ccchhhhCCCCCEEEecCC-CCHHHHHHHHHHHH
Q 001973 223 DLGAVSALSSGASIILSST-VSPGFVSQLERRLQ 255 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st-~~p~~~~~l~~~l~ 255 (988)
...+..|.-+|..|| ..++....+.+...
T Consensus 63 ----~~a~~~g~~~VigTTG~~~e~~~~l~~aa~ 92 (245)
T 1p9l_A 63 ----EFLIDNGIHAVVGTTGFTAERFQQVESWLV 92 (245)
T ss_dssp ----HHHHHTTCEEEECCCCCCHHHHHHHHHHHH
T ss_pred ----HHHHHcCCCEEEcCCCCCHHHHHHHHHHHH
Confidence 122334555555555 44444445554443
No 355
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=96.36 E-value=0.0023 Score=70.75 Aligned_cols=90 Identities=14% Similarity=0.156 Sum_probs=58.7
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhC-CCeEEEEeCCh---hHHHHHH-------hc-CCcccC--CHHHHhccCcEEEEEc
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRS-NFTVIGYDVYR---PTLTKFQ-------NV-GGLIAN--SPAEAAKDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~-G~~V~v~dr~~---~~~~~l~-------~~-G~~~~~--s~~e~~~~aDvV~l~v 210 (988)
|+||+|+| .|++|..+.+.|.++ .+++..+..+. +.-+.+. .. ...+.+ +..+..+++|+||+|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~ 83 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLAT 83 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECS
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECC
Confidence 46999999 699999999999985 45777664333 2212222 11 222222 4445448999999999
Q ss_pred CChHHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 211 TNEAQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 211 p~~~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
|.....+.+- .++..|..+||.|+-
T Consensus 84 p~~~s~~~~~-------~~~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 84 AHEVSHDLAP-------QFLEAGCVVFDLSGA 108 (337)
T ss_dssp CHHHHHHHHH-------HHHHTTCEEEECSST
T ss_pred ChHHHHHHHH-------HHHHCCCEEEEcCCc
Confidence 9866433321 234578999999986
No 356
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=96.34 E-value=0.0028 Score=70.31 Aligned_cols=105 Identities=11% Similarity=0.070 Sum_probs=72.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhc----cCCchhhhcc--ccccccCCCCc-------chHHHHHHh
Q 001973 2 VNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNA----AGNSWIFKNY--IPNLLRGDAKL-------HFLNAFIQN 68 (988)
Q Consensus 2 ~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~----~~~s~~~~~~--~~~~~~~~~~~-------f~l~l~~KD 68 (988)
.+|.+.+....++.|++.++++.|+|++.+.++...+ +..|+..+++ .+.+.++ +++ +......||
T Consensus 207 ~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~~~~~~~g-~~~~~~~~~~g~~~e~~~~ 285 (335)
T 1z82_A 207 WDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARG-FNPLKLLESSNQVVEGAFT 285 (335)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHHHHHHHHT-CCHHHHHHTCSSCCTHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHHHHHHhCC-CCHHHHHHhcCCeeeHHHH
Confidence 4788889999999999999999999999887642100 0112222222 2333332 221 112246799
Q ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHHH
Q 001973 69 LGIALDMAKTLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVWE 114 (988)
Q Consensus 69 l~la~~~a~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~~ 114 (988)
++++.++|++.|+++|+.+.+.+.|. .+.+...+++.+.
T Consensus 286 ~~~v~~~a~~~gv~~P~~~~v~~~~~-------~~~~~~~~~~~l~ 324 (335)
T 1z82_A 286 VKAVMKIAKENKIDMPISEEVYRVVY-------EGKPPLQSMRDLM 324 (335)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHH-------SCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcHHHHHHHHHh-------CCCCHHHHHHHHH
Confidence 99999999999999999999998885 3456666666543
No 357
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=96.33 E-value=0.0097 Score=65.08 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=50.1
Q ss_pred CeEEEEc-cchHHHHHHHHHHhC-C--CeEEEEeCCh---hHHHHHHhcCC--ccc----CCHHHHhccCcEEEEEcCCh
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRS-N--FTVIGYDVYR---PTLTKFQNVGG--LIA----NSPAEAAKDVGVLVIMVTNE 213 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~-G--~~V~v~dr~~---~~~~~l~~~G~--~~~----~s~~e~~~~aDvV~l~vp~~ 213 (988)
|||+||| +|.+|.+++..|... + .++.++|+++ ..+.++..... .+. ++..+++++||+||++.+.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~~ 80 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVA 80 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCCC
Confidence 5999999 899999999999875 5 5899999986 22334444321 121 35677899999999998654
No 358
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.32 E-value=0.0026 Score=70.86 Aligned_cols=90 Identities=16% Similarity=0.122 Sum_probs=57.5
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCC-----C-eEEEEeC--ChhH-HHH----HHh-cCCcccCCHHHHhccCcEEEEEc
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSN-----F-TVIGYDV--YRPT-LTK----FQN-VGGLIANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G-----~-~V~v~dr--~~~~-~~~----l~~-~G~~~~~s~~e~~~~aDvV~l~v 210 (988)
|+||+|+| .|++|..+.+.|.+++ + +++.+.+ +..+ ... +.. ....+.+...+...++|+||+|+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~al 88 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLAL 88 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEEEECC
Confidence 46999999 9999999999999987 3 6666642 2222 211 111 11222211134456899999999
Q ss_pred CChHHHHHHHccccchhhhCCCCCEEEecCCCC
Q 001973 211 TNEAQAESVLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 211 p~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
|.....+ +. +.+..|..+||.|+..
T Consensus 89 g~~~s~~-~~-------~~~~~G~~vIDlSa~~ 113 (352)
T 2nqt_A 89 PHGHSAV-LA-------QQLSPETLIIDCGADF 113 (352)
T ss_dssp TTSCCHH-HH-------HHSCTTSEEEECSSTT
T ss_pred CCcchHH-HH-------HHHhCCCEEEEECCCc
Confidence 9865332 22 2225689999999764
No 359
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.30 E-value=0.018 Score=62.98 Aligned_cols=99 Identities=5% Similarity=-0.057 Sum_probs=68.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCC---hhHHHHHHhc-----CCc--c--cCC---HHHHhccCcEEEEE
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVY---RPTLTKFQNV-----GGL--I--ANS---PAEAAKDVGVLVIM 209 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~---~~~~~~l~~~-----G~~--~--~~s---~~e~~~~aDvV~l~ 209 (988)
.+++.|+|.|-+|.+++..|++.|. +|++++|+ .++++++.+. +.. . .++ +.+.+.++|+||-|
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiIINa 233 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNA 233 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEEEC
Confidence 4689999999999999999999998 89999999 8888776542 221 1 122 44567799999999
Q ss_pred cCChHHHH-HHHccccchhhhCCCCCEEEecCCCCHHH
Q 001973 210 VTNEAQAE-SVLYGDLGAVSALSSGASIILSSTVSPGF 246 (988)
Q Consensus 210 vp~~~~~~-~vl~~~~~i~~~l~~g~ivId~st~~p~~ 246 (988)
+|-.-.-. ... +-.....++++.+|+|..-.+..|
T Consensus 234 Tp~Gm~~~~~~~--p~~~~~~l~~~~~V~DlvY~P~~T 269 (315)
T 3tnl_A 234 TGVGMKPFEGET--LLPSADMLRPELIVSDVVYKPTKT 269 (315)
T ss_dssp SSTTSTTSTTCC--SCCCGGGCCTTCEEEESCCSSSSC
T ss_pred ccCCCCCCCCCC--CCCcHHHcCCCCEEEEeccCCCCC
Confidence 98542100 000 000133467889999998764433
No 360
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=96.29 E-value=0.0048 Score=65.64 Aligned_cols=75 Identities=21% Similarity=0.193 Sum_probs=61.1
Q ss_pred CCCeEEEEccchH-HHHHHHHHHhC--CCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 145 SVTRVGFIGLGAM-GFGMATHLLRS--NFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 145 ~~~kIgiIG~G~m-G~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
..+++.|||.|.+ |.++|..|... |.+|++.+++. .++.+.++++|+||.+++.+.- +.
T Consensus 157 ~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t--------------~~L~~~~~~ADIVI~Avg~p~~----I~ 218 (281)
T 2c2x_A 157 AGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT--------------RDLPALTRQADIVVAAVGVAHL----LT 218 (281)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC--------------SCHHHHHTTCSEEEECSCCTTC----BC
T ss_pred CCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch--------------hHHHHHHhhCCEEEECCCCCcc----cC
Confidence 3469999999985 99999999999 88999997653 5788889999999999998762 21
Q ss_pred cccchhhhCCCCCEEEecCCC
Q 001973 222 GDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~ 242 (988)
...+++|.+|||.+..
T Consensus 219 -----~~~vk~GavVIDVgi~ 234 (281)
T 2c2x_A 219 -----ADMVRPGAAVIDVGVS 234 (281)
T ss_dssp -----GGGSCTTCEEEECCEE
T ss_pred -----HHHcCCCcEEEEccCC
Confidence 2346789999998764
No 361
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=96.27 E-value=0.0045 Score=69.19 Aligned_cols=89 Identities=13% Similarity=0.209 Sum_probs=56.7
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCC-CeEEEEeCChh----HHHHHHh-----------cCCccc-CCHHHHhc-cCcEEE
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSN-FTVIGYDVYRP----TLTKFQN-----------VGGLIA-NSPAEAAK-DVGVLV 207 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G-~~V~v~dr~~~----~~~~l~~-----------~G~~~~-~s~~e~~~-~aDvV~ 207 (988)
+||+|+| .|++|..+.+.|.++. ++|....+++. ....... ....+. .++++..+ ++|+||
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~ 88 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDIVF 88 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCEEE
Confidence 6999999 8999999999998875 57776653321 1221100 111121 24555546 899999
Q ss_pred EEcCChHHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 208 IMVTNEAQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 208 l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
+|+|.....+.+ ..++..|..|||.|+.
T Consensus 89 ~atp~~~~~~~a-------~~~~~aG~~VId~s~~ 116 (354)
T 1ys4_A 89 SALPSDLAKKFE-------PEFAKEGKLIFSNASA 116 (354)
T ss_dssp ECCCHHHHHHHH-------HHHHHTTCEEEECCST
T ss_pred ECCCchHHHHHH-------HHHHHCCCEEEECCch
Confidence 999986543322 1223467889998875
No 362
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.26 E-value=0.0066 Score=64.77 Aligned_cols=75 Identities=15% Similarity=0.193 Sum_probs=61.5
Q ss_pred CCCeEEEEccch-HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 145 SVTRVGFIGLGA-MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 145 ~~~kIgiIG~G~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
...++.|||.|. +|.++|..|...|.+|++.+++ +.++++.++++|+||.+++.+.. +.
T Consensus 160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~~----I~-- 219 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF--------------TTDLKSHTTKADILIVAVGKPNF----IT-- 219 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSSHHHHHTTCSEEEECCCCTTC----BC--
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC--------------chhHHHhcccCCEEEECCCCCCC----CC--
Confidence 346999999987 7999999999999999999864 35778889999999999997652 21
Q ss_pred cchhhhCCCCCEEEecCCC
Q 001973 224 LGAVSALSSGASIILSSTV 242 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~ 242 (988)
..++++|.+|||.+..
T Consensus 220 ---~~~vk~GavVIDvgi~ 235 (285)
T 3l07_A 220 ---ADMVKEGAVVIDVGIN 235 (285)
T ss_dssp ---GGGSCTTCEEEECCCE
T ss_pred ---HHHcCCCcEEEEeccc
Confidence 2356889999998764
No 363
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.26 E-value=0.0048 Score=65.85 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=61.7
Q ss_pred CCCeEEEEccch-HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 145 SVTRVGFIGLGA-MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 145 ~~~kIgiIG~G~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
...++.|||.|. +|.++|..|...|.+|++.+++ +.++.+.++++|+||.+++.+. ++.
T Consensus 158 ~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~--------------t~~L~~~~~~ADIVI~Avg~p~----lI~-- 217 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF--------------TKNLRHHVENADLLIVAVGKPG----FIP-- 217 (288)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS--------------CSCHHHHHHHCSEEEECSCCTT----CBC--
T ss_pred CCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC--------------chhHHHHhccCCEEEECCCCcC----cCC--
Confidence 357999999997 6999999999999999999854 3577888999999999999876 221
Q ss_pred cchhhhCCCCCEEEecCCC
Q 001973 224 LGAVSALSSGASIILSSTV 242 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~ 242 (988)
...+++|.+|||.+..
T Consensus 218 ---~~~vk~GavVIDVgi~ 233 (288)
T 1b0a_A 218 ---GDWIKEGAIVIDVGIN 233 (288)
T ss_dssp ---TTTSCTTCEEEECCCE
T ss_pred ---HHHcCCCcEEEEccCC
Confidence 2346889999998764
No 364
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.25 E-value=0.0016 Score=73.28 Aligned_cols=93 Identities=13% Similarity=0.096 Sum_probs=65.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhc----cCCchhhhcc--ccccccCC-CCc-----chHHHHHHhH
Q 001973 2 VNDLLEGVHLIASVEAISLGVQFGIHPWVLYDIISNA----AGNSWIFKNY--IPNLLRGD-AKL-----HFLNAFIQNL 69 (988)
Q Consensus 2 ~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~----~~~s~~~~~~--~~~~~~~~-~~~-----f~l~l~~KDl 69 (988)
.+|.+.+....++.|++.++++.|+|++.+.++...+ +..|++.+++ ++.+..+. +.. +....+.||+
T Consensus 226 ~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~ 305 (366)
T 1evy_A 226 GLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDLQLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATA 305 (366)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHHHHHHTCTTSHHHHHHHHHHTTCCHHHHHC---CCCHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhheeeecCCCCchHHHHHHHhCCCCHHHHHHHcCCeeehHHHH
Confidence 4788889999999999999999999998776531111 0113322322 23333321 110 1233578999
Q ss_pred HHHHHHHHhcCCCCcHHHHHHHHHH
Q 001973 70 GIALDMAKTLAFPLPLLAVAHQQLI 94 (988)
Q Consensus 70 ~la~~~a~~~g~~~p~~~~~~~~~~ 94 (988)
+++.++|++.|+++|+.+.+.+.|.
T Consensus 306 ~~v~~~a~~~gv~~P~~~~v~~~~~ 330 (366)
T 1evy_A 306 DPLMRLAKQLKVKMPLCHQIYEIVY 330 (366)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 9999999999999999999998887
No 365
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=96.24 E-value=0.0093 Score=65.91 Aligned_cols=105 Identities=14% Similarity=0.230 Sum_probs=64.8
Q ss_pred CCCeEEEEccchHHHHHHHHHHhC------C--CeE-EEEeCChhHHHH------H----HhcCCc-ccC---CHHHHh-
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRS------N--FTV-IGYDVYRPTLTK------F----QNVGGL-IAN---SPAEAA- 200 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~------G--~~V-~v~dr~~~~~~~------l----~~~G~~-~~~---s~~e~~- 200 (988)
+++||||||+|.||..++..|.+. | .+| .++|+++++.+. + ...++. +++ |+++++
T Consensus 5 ~~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll~ 84 (331)
T 3c8m_A 5 KTINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEALA 84 (331)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHHH
T ss_pred cEEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHhC
Confidence 347999999999999999999775 2 454 567888765332 1 112332 444 888877
Q ss_pred ccCcEEEEEcCCh---HHHHHHHccccchhhhCCCCCEEEecCCCCH--HHHHHHHHHHHh
Q 001973 201 KDVGVLVIMVTNE---AQAESVLYGDLGAVSALSSGASIILSSTVSP--GFVSQLERRLQF 256 (988)
Q Consensus 201 ~~aDvV~l~vp~~---~~~~~vl~~~~~i~~~l~~g~ivId~st~~p--~~~~~l~~~l~~ 256 (988)
.+.|+|+.|+|+. ....+.+ ...+..|+-||.++. .| ....++.+...+
T Consensus 85 ~~iDvVv~~t~~~~~~~~~~~~~------~~AL~aGkhVvtanK-~pla~~~~eL~~~A~~ 138 (331)
T 3c8m_A 85 RDFDIVVDATPASADGKKELAFY------KETFENGKDVVTANK-SGLANFWPEIMEYARS 138 (331)
T ss_dssp SSCSEEEECSCCCSSSHHHHHHH------HHHHHTTCEEEECCC-HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCccchHHHHH------HHHHHCCCeEEecCc-hhhHHHHHHHHHHHHH
Confidence 3579999999984 2222222 234556776665432 23 334455555444
No 366
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=96.23 E-value=0.0017 Score=66.98 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=45.7
Q ss_pred CeEEEEccchHHHHHHHH--HHhCCCeEE-EEeCChhHHHHHHh-cCCcccCCHHHHhccCcEEEEEcCChH
Q 001973 147 TRVGFIGLGAMGFGMATH--LLRSNFTVI-GYDVYRPTLTKFQN-VGGLIANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~--L~~~G~~V~-v~dr~~~~~~~l~~-~G~~~~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
++|+|||+|++|..+++. +...|+++. ++|.++++...... .++...+++.+.+++.|++++|+|+..
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~~ 157 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAVA 157 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCchh
Confidence 589999999999999994 445677755 56999987654221 122235677777766699999998754
No 367
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.21 E-value=0.0074 Score=62.29 Aligned_cols=65 Identities=11% Similarity=0.144 Sum_probs=46.8
Q ss_pred eEEEEc-cchHHHHHHHHHH-hCCCeEEEEeCChh-HHHHHHhcC--Ccc-------cCCHHHHhccCcEEEEEcCC
Q 001973 148 RVGFIG-LGAMGFGMATHLL-RSNFTVIGYDVYRP-TLTKFQNVG--GLI-------ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 148 kIgiIG-~G~mG~~lA~~L~-~~G~~V~v~dr~~~-~~~~l~~~G--~~~-------~~s~~e~~~~aDvV~l~vp~ 212 (988)
+|.|.| .|.+|..+++.|+ +.|++|++.+|+++ +.+.+...+ +.. .+++.++++++|+||.+...
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAME 83 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCC
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCC
Confidence 599999 6999999999999 89999999999998 776664222 111 11233455666776666654
No 368
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.21 E-value=0.013 Score=65.14 Aligned_cols=94 Identities=14% Similarity=0.199 Sum_probs=68.7
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCC----hhHH--------HHHHhc-C-CcccCCHHHHhccCcEEEEE
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVY----RPTL--------TKFQNV-G-GLIANSPAEAAKDVGVLVIM 209 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~----~~~~--------~~l~~~-G-~~~~~s~~e~~~~aDvV~l~ 209 (988)
...||.|+|.|.+|..+|+.|...|. +|+++||+ .++. +.+.+. + .....++.|+++++|++|-+
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlIG~ 270 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFIGV 270 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEEEC
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEEEe
Confidence 45799999999999999999999998 89999998 5542 233332 1 12256799999999998887
Q ss_pred cCChHHHHHHHccccchhhhCCCCCEEEecCCCCHH
Q 001973 210 VTNEAQAESVLYGDLGAVSALSSGASIILSSTVSPG 245 (988)
Q Consensus 210 vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~ 245 (988)
.......+ ++.+.+.++.+|+++|+-.|+
T Consensus 271 Sap~l~t~-------emVk~Ma~~pIIfalSNPt~E 299 (388)
T 1vl6_A 271 SRGNILKP-------EWIKKMSRKPVIFALANPVPE 299 (388)
T ss_dssp SCSSCSCH-------HHHTTSCSSCEEEECCSSSCS
T ss_pred CCCCccCH-------HHHHhcCCCCEEEEcCCCCCC
Confidence 65222223 334446678899999986553
No 369
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=96.20 E-value=0.0028 Score=70.78 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=56.9
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCCC-eEEEE-eCCh--hHHHHHH-----------hcCCcccCCHHHHhccCcEEEE
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSNF-TVIGY-DVYR--PTLTKFQ-----------NVGGLIANSPAEAAKDVGVLVI 208 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G~-~V~v~-dr~~--~~~~~l~-----------~~G~~~~~s~~e~~~~aDvV~l 208 (988)
+++|||||| .|+.|..+.+.|.++-+ ++... .++. .++...- .....+.+...+.++++|+||+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDvvf~ 85 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDIIFS 85 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCEEEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCEEEE
Confidence 457999999 79999999998887653 55544 3332 2222210 0122222211233578999999
Q ss_pred EcCChHHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 209 MVTNEAQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 209 ~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
|+|.....+.+- .++..|..+||.|+-
T Consensus 86 a~p~~~s~~~a~-------~~~~~G~~vIDlSa~ 112 (359)
T 4dpl_A 86 PLPQGAAGPVEE-------QFAKEGFPVISNSPD 112 (359)
T ss_dssp CCCTTTHHHHHH-------HHHHTTCEEEECSST
T ss_pred CCChHHHHHHHH-------HHHHCCCEEEEcCCC
Confidence 999876443321 234568999999985
No 370
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=96.20 E-value=0.0028 Score=70.78 Aligned_cols=91 Identities=12% Similarity=0.094 Sum_probs=56.9
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCCC-eEEEE-eCCh--hHHHHHH-----------hcCCcccCCHHHHhccCcEEEE
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSNF-TVIGY-DVYR--PTLTKFQ-----------NVGGLIANSPAEAAKDVGVLVI 208 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G~-~V~v~-dr~~--~~~~~l~-----------~~G~~~~~s~~e~~~~aDvV~l 208 (988)
+++|||||| .|+.|..+.+.|.++-+ ++... .++. .++...- .....+.+...+.++++|+||+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDvvf~ 85 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDIIFS 85 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCEEEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCEEEE
Confidence 457999999 79999999998887653 55544 3332 2222210 0122222211233578999999
Q ss_pred EcCChHHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 209 MVTNEAQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 209 ~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
|+|.....+.+- .++..|..+||.|+-
T Consensus 86 a~p~~~s~~~a~-------~~~~~G~~vIDlSa~ 112 (359)
T 4dpk_A 86 PLPQGAAGPVEE-------QFAKEGFPVISNSPD 112 (359)
T ss_dssp CCCTTTHHHHHH-------HHHHTTCEEEECSST
T ss_pred CCChHHHHHHHH-------HHHHCCCEEEEcCCC
Confidence 999876443321 234568999999985
No 371
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.19 E-value=0.0053 Score=67.53 Aligned_cols=120 Identities=16% Similarity=0.100 Sum_probs=67.3
Q ss_pred CCeEEEEccchHHHHHHHHHHhC-----C--Ce-EEEEeCChhH---------H-HHHHhcC-Ccc-cCCHHHHhc--cC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS-----N--FT-VIGYDVYRPT---------L-TKFQNVG-GLI-ANSPAEAAK--DV 203 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~-----G--~~-V~v~dr~~~~---------~-~~l~~~G-~~~-~~s~~e~~~--~a 203 (988)
+.||+|||+|.||+.+++.|.++ | .+ |-++|++++. . +...+.| ... .-+..+.+. +.
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~d~~e~l~~~~i 83 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAFSGPEDLMGEAA 83 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBCCSGGGGTTSCC
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccCCHHHHhcCCCC
Confidence 46999999999999999999874 3 34 4445777542 1 1222234 210 115666664 58
Q ss_pred cEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCCCH-HHHHHHHHHHHhcCCCceE-ecCcccC
Q 001973 204 GVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTVSP-GFVSQLERRLQFEGKDLKL-VDAPVSG 270 (988)
Q Consensus 204 DvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p-~~~~~l~~~l~~~~~g~~~-ldapv~g 270 (988)
|+|+.|+|+....+... +.+...+..|+-||.++...- ....++.+...+ .+..+ .++.+.+
T Consensus 84 DvVVe~T~~~~~~~pa~---~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~--~g~~~~~Ea~vg~ 147 (325)
T 3ing_A 84 DLLVDCTPASRDGVREY---SLYRMAFESGMNVVTANKSGLANKWHDIMDSANQ--NSKYIRYEATVAG 147 (325)
T ss_dssp SEEEECCCCCSSSHHHH---HHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHH--HTCCEECGGGSST
T ss_pred CEEEECCCCccccchHH---HHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHH--cCCeEEEEeeecc
Confidence 99999998752211111 122344567877776655221 344455555544 34443 3444433
No 372
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.17 E-value=0.0067 Score=64.70 Aligned_cols=75 Identities=16% Similarity=0.157 Sum_probs=61.7
Q ss_pred CCCeEEEEccch-HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 145 SVTRVGFIGLGA-MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 145 ~~~kIgiIG~G~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
..+++.|||.|. +|.++|..|...|.+|++.+++ +.++++.++++|+||.+++.+.. +.
T Consensus 159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~--------------t~~L~~~~~~ADIVI~Avg~p~~----I~-- 218 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK--------------TKDLSLYTRQADLIIVAAGCVNL----LR-- 218 (285)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHTTCSEEEECSSCTTC----BC--
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC--------------chhHHHHhhcCCEEEECCCCCCc----CC--
Confidence 347999999987 6999999999999999999864 35778889999999999997652 21
Q ss_pred cchhhhCCCCCEEEecCCC
Q 001973 224 LGAVSALSSGASIILSSTV 242 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~ 242 (988)
..++++|.+|||.+..
T Consensus 219 ---~~~vk~GavVIDVgi~ 234 (285)
T 3p2o_A 219 ---SDMVKEGVIVVDVGIN 234 (285)
T ss_dssp ---GGGSCTTEEEEECCCE
T ss_pred ---HHHcCCCeEEEEeccC
Confidence 2456899999998764
No 373
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=96.15 E-value=0.014 Score=64.81 Aligned_cols=101 Identities=13% Similarity=0.057 Sum_probs=67.0
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhc-cCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAK-DVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~-~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.++|+|+|.|++|..+|+.|...|.+|+++|+++++.+...+.|+... +..++.. +||+++-|- ++.++. .
T Consensus 175 GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A-----~~~~I~--~ 246 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCA-----MGGVIT--T 246 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECS-----CSCCBC--H
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhH-----HHhhcC--H
Confidence 469999999999999999999999999999999876322333466554 5567666 899988543 222221 1
Q ss_pred chhhhCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 001973 225 GAVSALSSGASIILSSTVSPGFVSQLERRLQF 256 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~ 256 (988)
.-.+.++ .++|++.++... +..+-.+.+.+
T Consensus 247 ~~~~~lk-~~iVie~AN~p~-t~~eA~~~L~~ 276 (355)
T 1c1d_A 247 EVARTLD-CSVVAGAANNVI-ADEAASDILHA 276 (355)
T ss_dssp HHHHHCC-CSEECCSCTTCB-CSHHHHHHHHH
T ss_pred HHHhhCC-CCEEEECCCCCC-CCHHHHHHHHh
Confidence 1223443 678888876542 22122355655
No 374
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.15 E-value=0.0057 Score=63.25 Aligned_cols=66 Identities=15% Similarity=0.173 Sum_probs=48.7
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc-------cCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI-------ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-------~~s~~e~~~~aDvV~l~vp~ 212 (988)
||+|.|.| .|.+|..++..|.+.|++|++.+|++++.+.+. .++.. .++..++++++|+||.+...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 57999999 599999999999999999999999987654321 12111 12344566778888877654
No 375
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.05 E-value=0.0022 Score=65.82 Aligned_cols=67 Identities=16% Similarity=0.254 Sum_probs=47.9
Q ss_pred CeEEEEccchHHHHHHHHH--HhCCCeEE-EEeCChh-HHHH-HHhcCCcc--cCCHHHHhc--cCcEEEEEcCChH
Q 001973 147 TRVGFIGLGAMGFGMATHL--LRSNFTVI-GYDVYRP-TLTK-FQNVGGLI--ANSPAEAAK--DVGVLVIMVTNEA 214 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L--~~~G~~V~-v~dr~~~-~~~~-l~~~G~~~--~~s~~e~~~--~aDvV~l~vp~~~ 214 (988)
.+++|||+|++|..+++.+ .+.|+++. ++|.+++ +... .. .|+++ .+++++.++ +.|++++|+|+..
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i-~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~~ 160 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTE-DGIPVYGISTINDHLIDSDIETAILTVPSTE 160 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCT-TCCBEEEGGGHHHHC-CCSCCEEEECSCGGG
T ss_pred CEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhccCceeE-CCeEEeCHHHHHHHHHHcCCCEEEEecCchh
Confidence 4899999999999999984 45677755 5699988 6543 11 25543 456667665 4899999998754
No 376
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.02 E-value=0.0087 Score=66.11 Aligned_cols=89 Identities=15% Similarity=0.027 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCHHHHH------HHHhhccCCchhhhccccccccCCCCc-chHHH----------H
Q 001973 3 NDLLEGVHLIASVEAISLGVQFGIHPWVLY------DIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNA----------F 65 (988)
Q Consensus 3 nN~l~~~~~~~~aEal~la~~~Gld~~~~~------~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l----------~ 65 (988)
+|.....+..++.|++.++++.|++++.+. +.+..+.. +... .... .....|+. ..+.. .
T Consensus 214 ~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~-~~~~~~s~~~d~~~~~~~~~~~~E~ 290 (335)
T 1txg_A 214 SNAKGVIATRAINEMAELIEILGGDRETAFGLSGFGDLIATFRG-GRNG-MLGE-LLGKGLSIDEAMEELERRGVGVVEG 290 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTHHHHHHTTTC-HHHH-HHHH-HHHTTCCHHHHHHHHHHTTCCCCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccchhheeecccc-CccH-HHHH-HHhCCCCHHHHHHHhccCCceecch
Confidence 788888999999999999999999998775 66665443 2211 0111 11222322 11222 2
Q ss_pred HHhHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 001973 66 IQNLGIALDMAKTLAFPLPLLAVAHQQLI 94 (988)
Q Consensus 66 ~KDl~la~~~a~~~g~~~p~~~~~~~~~~ 94 (988)
.||++++.++|++.|+++|+.+.+.+.+.
T Consensus 291 ~~~~~~~~~~a~~~gv~~P~~~~~~~~~~ 319 (335)
T 1txg_A 291 YKTAEKAYRLSSKINADTKLLDSIYRVLY 319 (335)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHh
Confidence 39999999999999999999999988886
No 377
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=96.00 E-value=0.0061 Score=67.98 Aligned_cols=90 Identities=17% Similarity=0.248 Sum_probs=55.8
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCC-CeEEEEe-CChhHHHHHH--------------hcCCcccC-CHHHHhccCcEE
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSN-FTVIGYD-VYRPTLTKFQ--------------NVGGLIAN-SPAEAAKDVGVL 206 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G-~~V~v~d-r~~~~~~~l~--------------~~G~~~~~-s~~e~~~~aDvV 206 (988)
+++||+|+| .|++|..+.+.|.++. .++.... .+....+.+. .....+.+ ++++ .+++|+|
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvV 81 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVV 81 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEE
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEE
Confidence 347999999 8999999999998765 4666664 2222111111 01222222 3333 4789999
Q ss_pred EEEcCChHHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 207 VIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 207 ~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
|+|+|.....+.+ ..++..|..|||.|+.
T Consensus 82 f~atp~~~s~~~a-------~~~~~aG~~VId~s~~ 110 (350)
T 2ep5_A 82 LSALPNELAESIE-------LELVKNGKIVVSNASP 110 (350)
T ss_dssp EECCCHHHHHHHH-------HHHHHTTCEEEECSST
T ss_pred EECCChHHHHHHH-------HHHHHCCCEEEECCcc
Confidence 9999976543322 1234467789998864
No 378
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.00 E-value=0.01 Score=63.27 Aligned_cols=75 Identities=17% Similarity=0.145 Sum_probs=61.5
Q ss_pred CCCeEEEEccch-HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 145 SVTRVGFIGLGA-MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 145 ~~~kIgiIG~G~-mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
..+++.|||.|. +|.++|..|...|.+|++.++. +.++++.++++|+||.+++.+.. +.
T Consensus 160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~--------------T~~L~~~~~~ADIVI~Avg~p~~----I~-- 219 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF--------------TRDLADHVSRADLVVVAAGKPGL----VK-- 219 (286)
T ss_dssp TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT--------------CSCHHHHHHTCSEEEECCCCTTC----BC--
T ss_pred CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC--------------CcCHHHHhccCCEEEECCCCCCC----CC--
Confidence 347999999876 8999999999999999999763 34678889999999999997652 21
Q ss_pred cchhhhCCCCCEEEecCCC
Q 001973 224 LGAVSALSSGASIILSSTV 242 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~ 242 (988)
..++++|.+|||.+..
T Consensus 220 ---~~~vk~GavVIDvgi~ 235 (286)
T 4a5o_A 220 ---GEWIKEGAIVIDVGIN 235 (286)
T ss_dssp ---GGGSCTTCEEEECCSC
T ss_pred ---HHHcCCCeEEEEeccc
Confidence 2456899999998875
No 379
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.93 E-value=0.015 Score=63.36 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=73.5
Q ss_pred CCeEEEE-cc-chHHHHHHHHHHhCCCeEEEEeCChhHHH-HHHhcCCcccCCHHHHhc--cCcEEEEEcCChHHHHHHH
Q 001973 146 VTRVGFI-GL-GAMGFGMATHLLRSNFTVIGYDVYRPTLT-KFQNVGGLIANSPAEAAK--DVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 146 ~~kIgiI-G~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~-~l~~~G~~~~~s~~e~~~--~aDvV~l~vp~~~~~~~vl 220 (988)
..+|+|| |+ |.+|..++++|.+.|++ .+|+.+|.+.. + -.|.++..|+.|+.+ ..|++++++|.... .+++
T Consensus 13 ~~siaVV~Gasg~~G~~~~~~l~~~G~~-~v~~VnP~~~g~~--i~G~~vy~sl~el~~~~~vD~avI~vP~~~~-~~~~ 88 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGTFHSQQALEYGTN-LVGGTTPGKGGKT--HLGLPVFNTVKEAKEQTGATASVIYVPPPFA-AAAI 88 (305)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCE-EEEEECTTCTTCE--ETTEEEESSHHHHHHHHCCCEEEECCCHHHH-HHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHCCCc-EEEEeCCCcCcce--ECCeeeechHHHhhhcCCCCEEEEecCHHHH-HHHH
Confidence 4578998 98 99999999999999999 56777776421 1 247788889999988 89999999998764 3343
Q ss_pred ccccchhhhCCCCCEEEecCCCC-HHHHHHHHHHHHhcCC-CceEe
Q 001973 221 YGDLGAVSALSSGASIILSSTVS-PGFVSQLERRLQFEGK-DLKLV 264 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~st~~-p~~~~~l~~~l~~~~~-g~~~l 264 (988)
++.... .- +.++..+... ....+++.+...+ . |+.++
T Consensus 89 ---~e~i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~~--~~gi~li 127 (305)
T 2fp4_A 89 ---NEAIDA-EV-PLVVCITEGIPQQDMVRVKHRLLR--QGKTRLI 127 (305)
T ss_dssp ---HHHHHT-TC-SEEEECCCCCCHHHHHHHHHHHTT--CSSCEEE
T ss_pred ---HHHHHC-CC-CEEEEECCCCChHHHHHHHHHHHh--cCCcEEE
Confidence 233332 11 3444455444 3444566666654 4 56655
No 380
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=95.80 E-value=0.014 Score=61.71 Aligned_cols=33 Identities=24% Similarity=0.381 Sum_probs=31.2
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCCh
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYR 179 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~ 179 (988)
.+|.|||+|.+|+.++.+|++.|. +++++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 489999999999999999999996 899999987
No 381
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.77 E-value=0.0026 Score=70.22 Aligned_cols=83 Identities=13% Similarity=0.183 Sum_probs=56.4
Q ss_pred CeEEEEccchHHHHHHHHHHhCC---------Ce-EEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSN---------FT-VIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G---------~~-V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~ 216 (988)
+||||||+|.||..++..|.++. .+ +.++|+++++.+.+. ....++|+++++ +.|+|+.|+|+....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~--~~~~~~d~~~ll-~iDvVve~t~~~~~a 80 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIP--QELLRAEPFDLL-EADLVVEAMGGVEAP 80 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSC--GGGEESSCCCCT-TCSEEEECCCCSHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccC--cccccCCHHHHh-CCCEEEECCCCcHHH
Confidence 69999999999999999998763 44 456788876533220 113466777877 999999999986433
Q ss_pred HHHHccccchhhhCCCCCEEEe
Q 001973 217 ESVLYGDLGAVSALSSGASIIL 238 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId 238 (988)
.+.. ...+..|+-||.
T Consensus 81 ~~~~------~~AL~aGKhVVt 96 (332)
T 2ejw_A 81 LRLV------LPALEAGIPLIT 96 (332)
T ss_dssp HHHH------HHHHHTTCCEEE
T ss_pred HHHH------HHHHHcCCeEEE
Confidence 3332 233445655554
No 382
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.77 E-value=0.0053 Score=65.38 Aligned_cols=84 Identities=6% Similarity=-0.127 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCch-hhhccc--c-ccccCCCCc-chHHHHHHhHHHHHHHHHhcCC
Q 001973 7 EGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSW-IFKNYI--P-NLLRGDAKL-HFLNAFIQNLGIALDMAKTLAF 81 (988)
Q Consensus 7 ~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~-~~~~~~--~-~~~~~~~~~-f~l~l~~KDl~la~~~a~~~g~ 81 (988)
++..+.+++|+ +++.|++++.+.+++..+..+++ ++..++ | .+.++.+.| |.+..+.||+ ++.|+
T Consensus 171 ~~~~~~~l~e~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-------~~~~~ 240 (263)
T 1yqg_A 171 VFYLLDALQNA---AIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQKNVTSKGGTTHEAVEAF-------RRHRV 240 (263)
T ss_dssp HHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTCCTTSHHHHHHHHH-------HHTTH
T ss_pred HHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCChhHHHHHHHH-------HHCCH
Confidence 44556666676 88999999999999998887777 666555 5 567788889 9999999997 67999
Q ss_pred CCcHHHHHHHHHHHHhhCc
Q 001973 82 PLPLLAVAHQQLILGLSHA 100 (988)
Q Consensus 82 ~~p~~~~~~~~~~~a~~~G 100 (988)
+.|+.+.+.+.|+++.+.|
T Consensus 241 ~~~~~~a~~~~~~~~~~~~ 259 (263)
T 1yqg_A 241 AEAISEGVCACVRRSQEME 259 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765
No 383
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.75 E-value=0.01 Score=65.75 Aligned_cols=68 Identities=9% Similarity=0.086 Sum_probs=53.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc----cCCH---HHH-hccCcEEEEEcCChHH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI----ANSP---AEA-AKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~----~~s~---~e~-~~~aDvV~l~vp~~~~ 215 (988)
.++|.|+|.|.+|..+++.|.+.|+ |++.|+++++++ +.+.|..+ .++. .++ ++++|.++++++++..
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~ 190 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 190 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHH
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHH
Confidence 3589999999999999999999999 999999999999 87776543 1222 223 5678888888887653
No 384
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=95.65 E-value=0.021 Score=62.99 Aligned_cols=66 Identities=17% Similarity=0.269 Sum_probs=50.0
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCC--e-----EEEEeCCh--hHH----HHHHhcC------CcccCCHHHHhccCcE
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNF--T-----VIGYDVYR--PTL----TKFQNVG------GLIANSPAEAAKDVGV 205 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~--~-----V~v~dr~~--~~~----~~l~~~G------~~~~~s~~e~~~~aDv 205 (988)
.+||+|+| +|.+|+.++..|+..|. + +.++|+++ +++ .+|.... ....++..+++++||+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDv 82 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV 82 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCE
Confidence 46999999 89999999999998875 5 99999974 222 3344422 2335677888999999
Q ss_pred EEEEcC
Q 001973 206 LVIMVT 211 (988)
Q Consensus 206 V~l~vp 211 (988)
||++-.
T Consensus 83 VvitAg 88 (333)
T 5mdh_A 83 AILVGS 88 (333)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 999864
No 385
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=95.65 E-value=0.034 Score=61.48 Aligned_cols=67 Identities=15% Similarity=0.319 Sum_probs=50.5
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCC-------eEEEEeCChhH--HH----HHHhc------CCcccCCHHHHhccCcE
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNF-------TVIGYDVYRPT--LT----KFQNV------GGLIANSPAEAAKDVGV 205 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~-------~V~v~dr~~~~--~~----~l~~~------G~~~~~s~~e~~~~aDv 205 (988)
..||+|+|+ |.+|.+++..|+.... ++.+||+++.. ++ +|... .....+++.+++++||+
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~adv 103 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAI 103 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHHHhCCCCE
Confidence 359999996 9999999999987653 79999997642 22 34332 12346788899999999
Q ss_pred EEEEcCC
Q 001973 206 LVIMVTN 212 (988)
Q Consensus 206 V~l~vp~ 212 (988)
|+++-.-
T Consensus 104 Vvi~aG~ 110 (345)
T 4h7p_A 104 AIMCGAF 110 (345)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998643
No 386
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.63 E-value=0.0071 Score=61.25 Aligned_cols=36 Identities=14% Similarity=0.293 Sum_probs=33.6
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHH
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTL 182 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~ 182 (988)
|+|.|.|. |.+|..+++.|.+.|++|++.+|++++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~ 40 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL 40 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc
Confidence 68999998 9999999999999999999999998764
No 387
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=95.58 E-value=0.0043 Score=68.90 Aligned_cols=90 Identities=17% Similarity=0.153 Sum_probs=53.8
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCC---eEEEE-eCC-hhHHHHHHhcCCcccC-CHHHHhccCcEEEEEcCChHHHHH
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNF---TVIGY-DVY-RPTLTKFQNVGGLIAN-SPAEAAKDVGVLVIMVTNEAQAES 218 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~---~V~v~-dr~-~~~~~~l~~~G~~~~~-s~~e~~~~aDvV~l~vp~~~~~~~ 218 (988)
+|||+|+| .|++|..+.+.|.+.+| ++... +++ ..+.-.+......+.+ ++ +..+++|+||+|+|.....+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~-~~~~~~DvV~~a~g~~~s~~- 83 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDS-FDFSSVGLAFFAAAAEVSRA- 83 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGG-CCGGGCSEEEECSCHHHHHH-
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCH-HHhcCCCEEEEcCCcHHHHH-
Confidence 36999999 89999999999997665 44544 332 2110001100111111 22 23568999999999765332
Q ss_pred HHccccchhhhCCCCCEEEecCCCC
Q 001973 219 VLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 219 vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
.. ..++..|..+||.|+..
T Consensus 84 ~a------~~~~~aG~kvId~Sa~~ 102 (340)
T 2hjs_A 84 HA------ERARAAGCSVIDLSGAL 102 (340)
T ss_dssp HH------HHHHHTTCEEEETTCTT
T ss_pred HH------HHHHHCCCEEEEeCCCC
Confidence 22 12334578899998754
No 388
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.56 E-value=0.023 Score=61.96 Aligned_cols=94 Identities=10% Similarity=0.052 Sum_probs=65.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCC---hhHHHHHHhc-----CCc--c--cCCH---HHHhccCcEEEEE
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVY---RPTLTKFQNV-----GGL--I--ANSP---AEAAKDVGVLVIM 209 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~---~~~~~~l~~~-----G~~--~--~~s~---~e~~~~aDvV~l~ 209 (988)
.+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++++.+. +.. . ..+. .+.+.++|+||-|
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiIINa 227 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILTNG 227 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEEEC
Confidence 3589999999999999999999998 89999999 8777776542 221 1 2233 4567789999999
Q ss_pred cCChHHHHHHHccccch---hhhCCCCCEEEecCCCC
Q 001973 210 VTNEAQAESVLYGDLGA---VSALSSGASIILSSTVS 243 (988)
Q Consensus 210 vp~~~~~~~vl~~~~~i---~~~l~~g~ivId~st~~ 243 (988)
+|..-.-.. ...+ ...+.++.+++|+--.+
T Consensus 228 Tp~Gm~~~~----~~~~~~~~~~l~~~~~v~D~vY~P 260 (312)
T 3t4e_A 228 TKVGMKPLE----NESLIGDVSLLRPELLVTECVYNP 260 (312)
T ss_dssp SSTTSTTST----TCCSCCCGGGSCTTCEEEECCCSS
T ss_pred CcCCCCCCC----CCcccCCHHHcCCCCEEEEeccCC
Confidence 886431000 0011 13466788888887654
No 389
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.53 E-value=0.0097 Score=64.93 Aligned_cols=88 Identities=15% Similarity=0.049 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCH--HHHHHHHhhccCCchhhhccccccccCCC-Cc-chHHHHHHhHHHHHHHHHhcCCCC
Q 001973 8 GVHLIASVEAISLGVQFGIHP--WVLYDIISNAAGNSWIFKNYIPNLLRGDA-KL-HFLNAFIQNLGIALDMAKTLAFPL 83 (988)
Q Consensus 8 ~~~~~~~aEal~la~~~Gld~--~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~-f~l~l~~KDl~la~~~a~~~g~~~ 83 (988)
..+..++.|++.++++.|+++ +.+.+.+..........+++ +.|. .|+ .+ +..+ +.||++++.++|++.|+++
T Consensus 220 ~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~~~~~~~~~~~~-~sm~-~d~~~~g~~~E-~~~~~~~~~~~a~~~gv~~ 296 (316)
T 2ew2_A 220 SLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQTYDPNGIGLHY-PSMY-QDLIKNHRLTE-IDYINGAVWRKGQKYNVAT 296 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTCTTTTTTSC-CHHH-HHHTTTCCCCS-GGGTHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHhccccCCCCC-cHHH-HHHHHcCCcch-HHHHhhHHHHHHHHhCCCC
Confidence 567789999999999999997 57888887633221112222 2222 344 44 4556 7899999999999999999
Q ss_pred cHHHHHHHHHHHHhh
Q 001973 84 PLLAVAHQQLILGLS 98 (988)
Q Consensus 84 p~~~~~~~~~~~a~~ 98 (988)
|+.+.+.+.+..+..
T Consensus 297 P~~~~~~~~~~~~~~ 311 (316)
T 2ew2_A 297 PFCAMLTQLVHGKEE 311 (316)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999987654
No 390
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=95.51 E-value=0.016 Score=64.18 Aligned_cols=67 Identities=19% Similarity=0.203 Sum_probs=48.7
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCCh----hHHH---HHHhcCCcc-------cCCHHHHhc--cCcEEEE
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYR----PTLT---KFQNVGGLI-------ANSPAEAAK--DVGVLVI 208 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~----~~~~---~l~~~G~~~-------~~s~~e~~~--~aDvV~l 208 (988)
+|+|.|.|. |.+|..++..|.+.||+|++.+|++ ++.+ .+...++.+ .+++.++++ ++|+||.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 468999998 9999999999999999999999976 4444 233344432 123445566 7888887
Q ss_pred EcCC
Q 001973 209 MVTN 212 (988)
Q Consensus 209 ~vp~ 212 (988)
+...
T Consensus 90 ~a~~ 93 (346)
T 3i6i_A 90 TVGG 93 (346)
T ss_dssp CCCG
T ss_pred CCch
Confidence 7654
No 391
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.50 E-value=0.056 Score=55.89 Aligned_cols=112 Identities=15% Similarity=0.131 Sum_probs=73.4
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChh-HHHHHHhcC-CcccC--CHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRP-TLTKFQNVG-GLIAN--SPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~-~~~~l~~~G-~~~~~--s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
+.++|-|||.|.+|..-+..|.+.|.+|++++.+.. .++.+.+.| +.... -..+.+.++|+||.++.++..-..+.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N~~I~ 109 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAVNKFVK 109 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHHHHHHH
Confidence 457999999999999999999999999999987653 355565543 33211 11234678999999988876434333
Q ss_pred ccc-cch--------------hh-hCCCCCEEEecCC--CCHHHHHHHHHHHHh
Q 001973 221 YGD-LGA--------------VS-ALSSGASIILSST--VSPGFVSQLERRLQF 256 (988)
Q Consensus 221 ~~~-~~i--------------~~-~l~~g~ivId~st--~~p~~~~~l~~~l~~ 256 (988)
... .++ .+ ....|.+.|-.|| .+|..++.+.+.+.+
T Consensus 110 ~~ak~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~ 163 (223)
T 3dfz_A 110 QHIKNDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSS 163 (223)
T ss_dssp HHSCTTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred HHHhCCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 100 010 00 1123455555554 578888888888765
No 392
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=95.47 E-value=0.0034 Score=69.54 Aligned_cols=90 Identities=17% Similarity=0.106 Sum_probs=54.7
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCC---CeEEEEe-C-ChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHH
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSN---FTVIGYD-V-YRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G---~~V~v~d-r-~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~v 219 (988)
++||+|+| .|++|..+.+.|.+++ +++..+. + +..+.-.+......+.+...+..+++|+||+|+|.....+.+
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~s~~~a 82 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSAKWA 82 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHHHHHHH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchHHHHHH
Confidence 46999999 9999999999999874 4566554 2 221100011111112111112346899999999976543322
Q ss_pred HccccchhhhCCCCCEEEecCCC
Q 001973 220 LYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~st~ 242 (988)
..++..|..+||.|+-
T Consensus 83 -------~~~~~~G~~vId~s~~ 98 (336)
T 2r00_A 83 -------PIAAEAGVVVIDNTSH 98 (336)
T ss_dssp -------HHHHHTTCEEEECSST
T ss_pred -------HHHHHcCCEEEEcCCc
Confidence 2234568899999875
No 393
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.47 E-value=0.017 Score=53.85 Aligned_cols=102 Identities=16% Similarity=0.126 Sum_probs=69.2
Q ss_pred CCeEEEEcc----chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 146 VTRVGFIGL----GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 146 ~~kIgiIG~----G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
..+|+|||+ +.+|..+.++|.+.||+|+..|...+.+ .|.+...|+.++-. .|++++++|... +.+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----~G~~~y~sl~dlp~-vDlavi~~p~~~-v~~~v- 75 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----LGKTIINERPVIEG-VDTVTLYINPQN-QLSEY- 75 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----TTEECBCSCCCCTT-CCEEEECSCHHH-HGGGH-
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----CCeeccCChHHCCC-CCEEEEEeCHHH-HHHHH-
Confidence 458999998 5699999999999999998888764433 36777788888777 999999999754 44444
Q ss_pred cccchhhhCCCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEe
Q 001973 222 GDLGAVSALSSGASIILSSTVSPGFVSQLERRLQFEGKDLKLV 264 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~p~~~~~l~~~l~~~~~g~~~l 264 (988)
++..+.- ...+|+..... .+++.+...+ .|++++
T Consensus 76 --~e~~~~g-~k~v~~~~G~~----~~e~~~~a~~--~Girvv 109 (122)
T 3ff4_A 76 --NYILSLK-PKRVIFNPGTE----NEELEEILSE--NGIEPV 109 (122)
T ss_dssp --HHHHHHC-CSEEEECTTCC----CHHHHHHHHH--TTCEEE
T ss_pred --HHHHhcC-CCEEEECCCCC----hHHHHHHHHH--cCCeEE
Confidence 3333322 22444433222 2355555555 567766
No 394
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=95.46 E-value=0.025 Score=62.41 Aligned_cols=90 Identities=18% Similarity=0.210 Sum_probs=59.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhC-CCeEEE-EeC--ChhHHHHHHhc----C----C---------------cc--cCCH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS-NFTVIG-YDV--YRPTLTKFQNV----G----G---------------LI--ANSP 196 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~-G~~V~v-~dr--~~~~~~~l~~~----G----~---------------~~--~~s~ 196 (988)
++||||+|+|++|..+++.|.++ +.+|.. .|+ +++....+.+. | . .+ ..++
T Consensus 3 ~ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~ 82 (335)
T 1u8f_O 3 KVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred ceEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCH
Confidence 36999999999999999999875 467554 464 67776665541 1 0 00 1255
Q ss_pred HHHh---ccCcEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 197 AEAA---KDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 197 ~e~~---~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
++.- .++|+||.|+|.....+.+ ..++..|..+|++|.-
T Consensus 83 ~~l~~~~~~vDvV~eatg~~~~~e~a-------~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 83 SKIKWGDAGAEYVVESTGVFTTMEKA-------GAHLQGGAKRVIISAP 124 (335)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHHHH-------GGGGGGTCSEEEESSC
T ss_pred HHCccccCCCCEEEECCCchhhHHHH-------HHHHhCCCeEEEeccC
Confidence 5541 4789999999986644332 3455667667777764
No 395
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.46 E-value=0.053 Score=60.00 Aligned_cols=88 Identities=16% Similarity=0.201 Sum_probs=57.4
Q ss_pred CeEEEEccchHHHHHHHHHHhC-CCeEEE-EeCChhHHHH---------------------HHhcCCcccCCHHHHhccC
Q 001973 147 TRVGFIGLGAMGFGMATHLLRS-NFTVIG-YDVYRPTLTK---------------------FQNVGGLIANSPAEAAKDV 203 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~-G~~V~v-~dr~~~~~~~---------------------l~~~G~~~~~s~~e~~~~a 203 (988)
+||||+|+|.+|..+++.|.++ +++|.. .|++++.... +...+..+..++.+...++
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 82 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVEGTILDIIEDA 82 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCCCBGGGTGGGC
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEECCchHHhccCC
Confidence 5999999999999999999876 467554 4555444332 2222333444555556789
Q ss_pred cEEEEEcCChHHHHHHHccccchhhhCCCCCEEEecC
Q 001973 204 GVLVIMVTNEAQAESVLYGDLGAVSALSSGASIILSS 240 (988)
Q Consensus 204 DvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~s 240 (988)
|+||.|+|.....+.. . ..++..|+.||+.+
T Consensus 83 DiV~eatg~~~s~~~a----~--~~~l~aG~~VI~sa 113 (343)
T 2yyy_A 83 DIVVDGAPKKIGKQNL----E--NIYKPHKVKAILQG 113 (343)
T ss_dssp SEEEECCCTTHHHHHH----H--HTTTTTTCEEEECT
T ss_pred CEEEECCCccccHHHH----H--HHHHHCCCEEEECC
Confidence 9999999875533322 1 24566787777633
No 396
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.46 E-value=0.016 Score=63.93 Aligned_cols=67 Identities=15% Similarity=0.289 Sum_probs=48.7
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHhCCC-------eEEEEeCCh--hHH----HHHHhcC------CcccCCHHHHhccCc
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLRSNF-------TVIGYDVYR--PTL----TKFQNVG------GLIANSPAEAAKDVG 204 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~~G~-------~V~v~dr~~--~~~----~~l~~~G------~~~~~s~~e~~~~aD 204 (988)
+.|||.|+|. |.+|+.++..|...|+ +|+++|+++ ++. ..+.... +...++..++++++|
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCC
Confidence 3469999997 9999999999999996 899999875 222 2233221 112356677888899
Q ss_pred EEEEEcC
Q 001973 205 VLVIMVT 211 (988)
Q Consensus 205 vV~l~vp 211 (988)
+||.+..
T Consensus 83 ~Vih~Ag 89 (327)
T 1y7t_A 83 YALLVGA 89 (327)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9988754
No 397
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.43 E-value=0.013 Score=63.17 Aligned_cols=81 Identities=12% Similarity=-0.004 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCH--HHH----HHHHhhc-cCCchhhhccccccccCCCCcchHHHHHHhHHHHHHHHHhcC
Q 001973 8 GVHLIASVEAISLGVQFGIHP--WVL----YDIISNA-AGNSWIFKNYIPNLLRGDAKLHFLNAFIQNLGIALDMAKTLA 80 (988)
Q Consensus 8 ~~~~~~~aEal~la~~~Gld~--~~~----~~~l~~~-~~~s~~~~~~~~~~~~~~~~~f~l~l~~KDl~la~~~a~~~g 80 (988)
.....++.|++.++++.|+++ +.+ .+++..+ ...|.|++.. ..+. .+++. ++.+++.++|++.|
T Consensus 202 ~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~~~ssm~~d~----~~g~----~~e~~-~~~g~~~~~a~~~g 272 (291)
T 1ks9_A 202 QEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAENISSMLQDI----RALR----HTEID-YINGFLLRRARAHG 272 (291)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTTCCCHHHHHH----HTTC----CCSGG-GTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCCCCChHHHHH----HcCC----ccHHH-HHHHHHHHHHHHhC
Confidence 678899999999999999987 555 4455443 3444444321 1222 11222 57889999999999
Q ss_pred CCCcHHHHHHHHHHHHh
Q 001973 81 FPLPLLAVAHQQLILGL 97 (988)
Q Consensus 81 ~~~p~~~~~~~~~~~a~ 97 (988)
+|+|+.+.+.+.|+...
T Consensus 273 v~~P~~~~~~~~~~~~e 289 (291)
T 1ks9_A 273 IAVPENTRLFEMVKRKE 289 (291)
T ss_dssp CCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHh
Confidence 99999999999988653
No 398
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=95.35 E-value=0.021 Score=61.84 Aligned_cols=67 Identities=25% Similarity=0.254 Sum_probs=48.1
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCCh------hHHHH---HHhcCCccc-------CCHHHHhccCcEEEE
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYR------PTLTK---FQNVGGLIA-------NSPAEAAKDVGVLVI 208 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~------~~~~~---l~~~G~~~~-------~s~~e~~~~aDvV~l 208 (988)
+++|.|.|. |.+|..++..|++.||+|++.+|++ ++.+. +...|+... +++.++++++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 468999996 9999999999999999999999973 34332 233454321 134456667888887
Q ss_pred EcCC
Q 001973 209 MVTN 212 (988)
Q Consensus 209 ~vp~ 212 (988)
+.+.
T Consensus 84 ~a~~ 87 (308)
T 1qyc_A 84 TVGS 87 (308)
T ss_dssp CCCG
T ss_pred CCcc
Confidence 7653
No 399
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=95.35 E-value=0.019 Score=62.66 Aligned_cols=65 Identities=22% Similarity=0.323 Sum_probs=46.8
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChh-HHH---HHHhcCCcc-------cCCHHHHhccCcEEEEEcC
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRP-TLT---KFQNVGGLI-------ANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~-~~~---~l~~~G~~~-------~~s~~e~~~~aDvV~l~vp 211 (988)
++|.|.|. |.+|..++..|.+.|++|++.+|+++ +.+ .+...|+.+ .+++.++++++|+||.+.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 48999995 99999999999999999999999874 333 233445432 1134455667777777665
No 400
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=95.16 E-value=0.027 Score=61.19 Aligned_cols=66 Identities=15% Similarity=0.194 Sum_probs=46.7
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCC-----hhHHHHH---HhcCCccc-------CCHHHHhccCcEEEEE
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVY-----RPTLTKF---QNVGGLIA-------NSPAEAAKDVGVLVIM 209 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~-----~~~~~~l---~~~G~~~~-------~s~~e~~~~aDvV~l~ 209 (988)
+|+|.|.| .|.+|..++..|.+.|++|++.+|+ +++.+.+ ...|+... +++.++++++|+||.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 46899999 4999999999999999999999998 4454433 23344321 1234556667777766
Q ss_pred cC
Q 001973 210 VT 211 (988)
Q Consensus 210 vp 211 (988)
..
T Consensus 84 a~ 85 (313)
T 1qyd_A 84 LA 85 (313)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 401
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=95.11 E-value=0.016 Score=65.04 Aligned_cols=90 Identities=12% Similarity=0.177 Sum_probs=55.2
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCC-CeEE-EEe-C-Chh-HHHHHH-----------hcCCcccC-CHHHHhccCcEEE
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSN-FTVI-GYD-V-YRP-TLTKFQ-----------NVGGLIAN-SPAEAAKDVGVLV 207 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G-~~V~-v~d-r-~~~-~~~~l~-----------~~G~~~~~-s~~e~~~~aDvV~ 207 (988)
++|||||| .|+.|..|.+.|.++. .++. ++. + +.. ++.+.. .....+.+ +..+.++++|+||
T Consensus 19 ~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~~~~~~~Dvvf 98 (381)
T 3hsk_A 19 VKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPEGNFLECDVVF 98 (381)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSCTTGGGCSEEE
T ss_pred ccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchhhhcccCCEEE
Confidence 46999999 7999999999998876 3564 332 2 221 122110 01122211 1221457899999
Q ss_pred EEcCChHHHHHHHccccchhhhCCCCCEEEecCCC
Q 001973 208 IMVTNEAQAESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 208 l~vp~~~~~~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
+|+|.....+.+- ..+..|..|||.|+-
T Consensus 99 ~alp~~~s~~~~~-------~~~~~G~~VIDlSa~ 126 (381)
T 3hsk_A 99 SGLDADVAGDIEK-------SFVEAGLAVVSNAKN 126 (381)
T ss_dssp ECCCHHHHHHHHH-------HHHHTTCEEEECCST
T ss_pred ECCChhHHHHHHH-------HHHhCCCEEEEcCCc
Confidence 9999866433321 223468999999985
No 402
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=95.01 E-value=0.029 Score=60.69 Aligned_cols=66 Identities=20% Similarity=0.104 Sum_probs=50.6
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCC-CeEEEEeCChhHH--HHHHhcCCcc----c---CCHHHHhccCcEEEEEcC
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSN-FTVIGYDVYRPTL--TKFQNVGGLI----A---NSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G-~~V~v~dr~~~~~--~~l~~~G~~~----~---~s~~e~~~~aDvV~l~vp 211 (988)
+|+|.|.|. |.+|..++..|.+.| ++|++.+|++++. +.+...|+.. . +++.++++++|+||.+..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 468999997 999999999999998 9999999997764 3444455432 1 234456778899888765
No 403
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=94.97 E-value=0.0057 Score=68.20 Aligned_cols=89 Identities=18% Similarity=0.220 Sum_probs=53.8
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCe---EEEEe-C-ChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFT---VIGYD-V-YRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~---V~v~d-r-~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
+||+||| .|+.|..|.+.|.+++|+ +.... + +..+.-.+......+.+-..+..+++|+||+|+|.....+.+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~a- 81 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYA- 81 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHHHHHHH-
T ss_pred cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHHHhcCCCEEEECCChHhHHHHH-
Confidence 5999999 899999999999998773 34333 1 111100010001111111123357899999999976543322
Q ss_pred ccccchhhhCCCCCEEEecCCC
Q 001973 221 YGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~st~ 242 (988)
..++..|..+||.|+-
T Consensus 82 ------~~~~~~G~~vIDlSa~ 97 (366)
T 3pwk_A 82 ------PYAVKAGVVVVDNTSY 97 (366)
T ss_dssp ------HHHHHTTCEEEECSST
T ss_pred ------HHHHHCCCEEEEcCCc
Confidence 1234568899999975
No 404
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.92 E-value=0.019 Score=61.75 Aligned_cols=62 Identities=19% Similarity=0.292 Sum_probs=45.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc-------cCCHHHHhcc-CcEEEEEcC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI-------ANSPAEAAKD-VGVLVIMVT 211 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-------~~s~~e~~~~-aDvV~l~vp 211 (988)
+|+|.|.|+|.+|+.++..|.+.|++|++.+|+++... .++.. .+++.++++. +|+||-+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQPMP----AGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSCCC----TTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 46999999999999999999999999999999876521 22221 1223344555 888887753
No 405
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=94.91 E-value=0.058 Score=60.13 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=48.1
Q ss_pred CCCCeEEEEc-cchHHHHHHHHHHhCCC--e---EEEEeCChhH----H----HHHHhcC------CcccCCHHHHhccC
Q 001973 144 NSVTRVGFIG-LGAMGFGMATHLLRSNF--T---VIGYDVYRPT----L----TKFQNVG------GLIANSPAEAAKDV 203 (988)
Q Consensus 144 ~~~~kIgiIG-~G~mG~~lA~~L~~~G~--~---V~v~dr~~~~----~----~~l~~~G------~~~~~s~~e~~~~a 203 (988)
+..+||+||| .|.+|.+++-.|+..+. + +.++|.+.+. + -+|.... ....++..+++++|
T Consensus 30 ~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~~da 109 (375)
T 7mdh_A 30 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDV 109 (375)
T ss_dssp CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHhCCC
Confidence 3457999999 79999999999998774 2 7776554332 2 2233221 23456678889999
Q ss_pred cEEEEEcCC
Q 001973 204 GVLVIMVTN 212 (988)
Q Consensus 204 DvV~l~vp~ 212 (988)
|+||++-..
T Consensus 110 DvVVitag~ 118 (375)
T 7mdh_A 110 DWALLIGAK 118 (375)
T ss_dssp SEEEECCCC
T ss_pred CEEEEcCCC
Confidence 999997543
No 406
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.88 E-value=0.027 Score=60.15 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=66.4
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhc-----CCcccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNV-----GGLIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~-----G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
.++.|+|+|-.+.+++..|++.|. +|+++||+.++.+.+.+. .........+..+++|+|+-|+|-.-.-..-+
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNaTp~Gm~~~~~~ 205 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANASPVGMGTRAEL 205 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEECSSTTCSTTCCC
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccCCccccCCCCCC
Confidence 589999999999999999999995 799999999998887653 11111122233567899999988532100000
Q ss_pred ccccchhhhCCCCCEEEecCCCCH
Q 001973 221 YGDLGAVSALSSGASIILSSTVSP 244 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~st~~p 244 (988)
--+......++++.++.|+--.+.
T Consensus 206 p~~~~~~~~l~~~~~v~D~vY~P~ 229 (269)
T 3tum_A 206 PLSAALLATLQPDTLVADVVTSPE 229 (269)
T ss_dssp SSCHHHHHTCCTTSEEEECCCSSS
T ss_pred CCChHHHhccCCCcEEEEEccCCC
Confidence 000122445778899999976543
No 407
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=94.82 E-value=0.025 Score=60.85 Aligned_cols=66 Identities=12% Similarity=0.008 Sum_probs=48.8
Q ss_pred CeEEEEc-cchHHHHHHHHHHhC-CCeEEEEeCChhHHHHHHhcCCcc-------cCCHHHHhccCcEEEEEcCC
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRS-NFTVIGYDVYRPTLTKFQNVGGLI-------ANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~~G~~~-------~~s~~e~~~~aDvV~l~vp~ 212 (988)
|||.|.| .|.+|..++..|.+. |++|++.+|++++...+...++.+ .+++.++++++|+||.+...
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 5899999 599999999999998 999999999998766554444322 11334556677777776543
No 408
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.78 E-value=0.055 Score=59.81 Aligned_cols=88 Identities=20% Similarity=0.282 Sum_probs=58.1
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHh------cCCcccC-CHHHHhccCcEEEEEcCChHHH
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQN------VGGLIAN-SPAEAAKDVGVLVIMVTNEAQA 216 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~------~G~~~~~-s~~e~~~~aDvV~l~vp~~~~~ 216 (988)
|.|||||| .|+.|..|.+.|.++.+ ++....-+.+.-+.+.+ ....+.+ +..+..+++|++|+|+|...+.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~s~ 92 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGASY 92 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTHHH
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHHHH
Confidence 35999996 69999999999998763 56655422211111211 2233322 4555557899999999987744
Q ss_pred HHHHccccchhhhCCCCCEEEecCCC
Q 001973 217 ESVLYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 217 ~~vl~~~~~i~~~l~~g~ivId~st~ 242 (988)
+-+ +.+ .|..|||.|+.
T Consensus 93 ~~~--------~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 93 DLV--------REL-KGVKIIDLGAD 109 (351)
T ss_dssp HHH--------TTC-CSCEEEESSST
T ss_pred HHH--------HHh-CCCEEEECChh
Confidence 332 334 79999999985
No 409
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.72 E-value=0.034 Score=60.21 Aligned_cols=67 Identities=13% Similarity=0.202 Sum_probs=48.4
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCCh-------hHHHHH---HhcCCcc----c---CCHHHHhccCcEEE
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYR-------PTLTKF---QNVGGLI----A---NSPAEAAKDVGVLV 207 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~-------~~~~~l---~~~G~~~----~---~s~~e~~~~aDvV~ 207 (988)
+|+|.|.|. |.+|..++..|++.||+|++.+|++ ++.+.+ ...|+.. . +++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 368999996 9999999999999999999999987 554433 3345432 1 13345566777777
Q ss_pred EEcCC
Q 001973 208 IMVTN 212 (988)
Q Consensus 208 l~vp~ 212 (988)
.+.+.
T Consensus 82 ~~a~~ 86 (307)
T 2gas_A 82 CAAGR 86 (307)
T ss_dssp ECSSS
T ss_pred ECCcc
Confidence 77653
No 410
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=94.71 E-value=0.018 Score=64.44 Aligned_cols=68 Identities=21% Similarity=0.312 Sum_probs=47.0
Q ss_pred CCCCCeEEEEc-cchHHHHHHHHHHhC-CCeEEEEeCChhHHHHHHh-cCCc-----cc---CCHHHHhccCcEEEEEc
Q 001973 143 SNSVTRVGFIG-LGAMGFGMATHLLRS-NFTVIGYDVYRPTLTKFQN-VGGL-----IA---NSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 143 ~~~~~kIgiIG-~G~mG~~lA~~L~~~-G~~V~v~dr~~~~~~~l~~-~G~~-----~~---~s~~e~~~~aDvV~l~v 210 (988)
.+++|+|.|.| .|.+|+.++..|.+. ||+|++.+|++++...+.. .++. .. +++.++++++|+||-+.
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLV 99 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECB
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcC
Confidence 34457999999 699999999999998 9999999999876655433 1221 11 12334556677777644
No 411
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=94.68 E-value=0.018 Score=61.07 Aligned_cols=83 Identities=17% Similarity=0.064 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhccCCch-hhhccc--ccccc-CCCCc-chHHHHHHhHHHHHHHHHhcC
Q 001973 6 LEGVHLIASVEAISLGVQFGIHPWVLYDIISNAAGNSW-IFKNYI--PNLLR-GDAKL-HFLNAFIQNLGIALDMAKTLA 80 (988)
Q Consensus 6 l~~~~~~~~aEal~la~~~Gld~~~~~~~l~~~~~~s~-~~~~~~--~~~~~-~~~~~-f~l~l~~KDl~la~~~a~~~g 80 (988)
.+...+.+++|+ +++.|+|++.+++++..+..+++ ++..+. |.++. ..++| |++..+.||++ +.|
T Consensus 171 ~~~~~~~~la~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~p~~~~~~~~~~l~-------~~g 240 (259)
T 2ahr_A 171 YIYLFIEALAKA---GVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGGTTIAGLMELE-------RLG 240 (259)
T ss_dssp HHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHCCTTSHHHHHHHHHH-------HHT
T ss_pred HHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCChhHHHHHHHHH-------HCC
Confidence 344555666665 78999999999999999998888 565554 77774 44678 99999999985 577
Q ss_pred CCCcHHHHHHHHHHHHhh
Q 001973 81 FPLPLLAVAHQQLILGLS 98 (988)
Q Consensus 81 ~~~p~~~~~~~~~~~a~~ 98 (988)
++-.+.+++...++++.+
T Consensus 241 ~~~~~~~a~~~~~~r~~~ 258 (259)
T 2ahr_A 241 LTATVSSAIDKTIDKAKS 258 (259)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 777888888888887754
No 412
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.68 E-value=0.039 Score=60.22 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=47.3
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCCh------hHHHHH---HhcCCcc-------cCCHHHHhccCcEEEE
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYR------PTLTKF---QNVGGLI-------ANSPAEAAKDVGVLVI 208 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~------~~~~~l---~~~G~~~-------~~s~~e~~~~aDvV~l 208 (988)
+|+|.|.|. |.+|..++..|++.||+|++.+|++ ++.+.+ ...++.+ .+++.++++++|+||.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~ 83 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS 83 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 468999995 9999999999999999999999986 333332 3334432 1134455667777777
Q ss_pred EcCC
Q 001973 209 MVTN 212 (988)
Q Consensus 209 ~vp~ 212 (988)
+...
T Consensus 84 ~a~~ 87 (321)
T 3c1o_A 84 ALPF 87 (321)
T ss_dssp CCCG
T ss_pred CCCc
Confidence 6653
No 413
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.64 E-value=0.013 Score=60.20 Aligned_cols=37 Identities=11% Similarity=0.241 Sum_probs=33.9
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHH
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLT 183 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~ 183 (988)
|||.|.| .|.+|..++..|++.|++|++.+|++++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~ 38 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP 38 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh
Confidence 4899999 899999999999999999999999987654
No 414
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=94.64 E-value=0.0071 Score=62.17 Aligned_cols=67 Identities=18% Similarity=0.260 Sum_probs=47.6
Q ss_pred CeEEEEccchHHHHHHHHHHh-CCCeE-EEEeCChhHHHHHHhcCCc--ccCCHHHHhc-cCcEEEEEcCChH
Q 001973 147 TRVGFIGLGAMGFGMATHLLR-SNFTV-IGYDVYRPTLTKFQNVGGL--IANSPAEAAK-DVGVLVIMVTNEA 214 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~-~G~~V-~v~dr~~~~~~~l~~~G~~--~~~s~~e~~~-~aDvV~l~vp~~~ 214 (988)
++|+|||+|.+|..+++.+.. .|+++ -++|.++++...... |.. ..+++.+.++ +.|+|++|+|+..
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i~-gv~V~~~~dl~ell~~~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVGRPVR-GGVIEHVDLLPQRVPGRIEIALLTVPREA 152 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEET-TEEEEEGGGHHHHSTTTCCEEEECSCHHH
T ss_pred CEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhhc-CCeeecHHhHHHHHHcCCCEEEEeCCchh
Confidence 589999999999999996322 27774 456999887643221 322 3566777765 5899999998754
No 415
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=94.63 E-value=0.12 Score=58.63 Aligned_cols=69 Identities=20% Similarity=0.161 Sum_probs=47.3
Q ss_pred CCeEEEEccchH-HHHHHHHHHh--C---CCeEEEEeCChhHHHHHHh-------cCC--cccCCHHHHhccCcEEEEEc
Q 001973 146 VTRVGFIGLGAM-GFGMATHLLR--S---NFTVIGYDVYRPTLTKFQN-------VGG--LIANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG~G~m-G~~lA~~L~~--~---G~~V~v~dr~~~~~~~l~~-------~G~--~~~~s~~e~~~~aDvV~l~v 210 (988)
+|||+|||+|.. +..+...|+. . +.+|.+||+++++++.... ... ..+++..+++++||+|+++.
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~~~~~~~~~~~~v~~t~d~~~al~~AD~Viita 81 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF 81 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHHHHHHHhhCCeEEEEeCCHHHHhCCCCEEEEcC
Confidence 369999999985 2222234454 3 5689999999988654221 112 23567788999999999999
Q ss_pred CChH
Q 001973 211 TNEA 214 (988)
Q Consensus 211 p~~~ 214 (988)
..+.
T Consensus 82 gvg~ 85 (417)
T 1up7_A 82 RPGG 85 (417)
T ss_dssp CTTH
T ss_pred CCCC
Confidence 6554
No 416
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=94.63 E-value=0.078 Score=58.97 Aligned_cols=67 Identities=12% Similarity=0.083 Sum_probs=49.7
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHH--HHHHhc-CCcc--cC---C---HHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTL--TKFQNV-GGLI--AN---S---PAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~--~~l~~~-G~~~--~~---s---~~e~~~~aDvV~l~vp~ 212 (988)
.|+|.|.| .|.+|..+++.|++.|++|++.+|++++. +.+... ++.. .+ + +.++++++|+||.+...
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 46899999 59999999999999999999999988765 444432 3211 22 2 44567889999877653
No 417
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=94.63 E-value=0.022 Score=62.67 Aligned_cols=41 Identities=10% Similarity=0.216 Sum_probs=35.4
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQ 186 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~ 186 (988)
+|+|.|.| .|.+|+.++..|++.|++|++.+|++++.+.+.
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~ 54 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA 54 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc
Confidence 46999999 599999999999999999999999877654443
No 418
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=94.61 E-value=0.054 Score=59.75 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=29.9
Q ss_pred CeEEEEccchHHHHHHHHHHhC-CCeEEEE-eC--ChhHHHHHH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRS-NFTVIGY-DV--YRPTLTKFQ 186 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~-G~~V~v~-dr--~~~~~~~l~ 186 (988)
+||||+|+|++|..+++.|.++ +.+|... |+ +++....+.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll 47 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMF 47 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHH
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhh
Confidence 5999999999999999999876 4565544 53 555554543
No 419
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=94.52 E-value=0.054 Score=62.75 Aligned_cols=64 Identities=14% Similarity=0.260 Sum_probs=46.4
Q ss_pred CeEEEEccchHHHH--HHHHHHh------CCCeEEEEeCChhHHHHHH--------hcC----CcccCCHHHHhccCcEE
Q 001973 147 TRVGFIGLGAMGFG--MATHLLR------SNFTVIGYDVYRPTLTKFQ--------NVG----GLIANSPAEAAKDVGVL 206 (988)
Q Consensus 147 ~kIgiIG~G~mG~~--lA~~L~~------~G~~V~v~dr~~~~~~~l~--------~~G----~~~~~s~~e~~~~aDvV 206 (988)
|||+|||.|..|.+ +...++. .+.+|.++|+++++++... ..| +..++|..+++++||+|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~V 80 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADFI 80 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCEE
Confidence 59999999998865 2233332 2357999999998875421 123 23478999999999999
Q ss_pred EEEc
Q 001973 207 VIMV 210 (988)
Q Consensus 207 ~l~v 210 (988)
|++.
T Consensus 81 i~~~ 84 (477)
T 3u95_A 81 INTA 84 (477)
T ss_dssp EECC
T ss_pred EECc
Confidence 9986
No 420
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=94.52 E-value=0.086 Score=57.66 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=48.2
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCCC--eEEEEeC--ChhHHHH----HHhc------CCccc--C-CHHHHhccCcEEEE
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSNF--TVIGYDV--YRPTLTK----FQNV------GGLIA--N-SPAEAAKDVGVLVI 208 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G~--~V~v~dr--~~~~~~~----l~~~------G~~~~--~-s~~e~~~~aDvV~l 208 (988)
|||.|+|+ |.+|++++..|+..|+ ++.++|+ ++++.+. +.+. ...+. + ++.++++++|+||+
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~ 80 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII 80 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence 59999999 9999999999998885 6999999 7654432 3221 11222 1 25788999999999
Q ss_pred EcC
Q 001973 209 MVT 211 (988)
Q Consensus 209 ~vp 211 (988)
+..
T Consensus 81 ~Ag 83 (313)
T 1hye_A 81 TSG 83 (313)
T ss_dssp CCS
T ss_pred CCC
Confidence 874
No 421
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.46 E-value=0.077 Score=61.98 Aligned_cols=115 Identities=17% Similarity=0.280 Sum_probs=69.6
Q ss_pred CCCCeEEEEccchHHHH-HHHHHHhCCCeEEEEeCCh-hHHHHHHhcCCcccC-CHHHHhccCcEEEEEc--CCh-HHHH
Q 001973 144 NSVTRVGFIGLGAMGFG-MATHLLRSNFTVIGYDVYR-PTLTKFQNVGGLIAN-SPAEAAKDVGVLVIMV--TNE-AQAE 217 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~-lA~~L~~~G~~V~v~dr~~-~~~~~l~~~G~~~~~-s~~e~~~~aDvV~l~v--p~~-~~~~ 217 (988)
.+.++|.|||+|..|.+ +|+.|.+.|++|+++|... ...+.|.+.|+.+.. ...+.+.++|+|+.+- |.+ ..+.
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~p~~~ 99 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADNPEIV 99 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTCHHHH
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCCHHHH
Confidence 34579999999999995 9999999999999999764 345678888886532 1223456899999863 321 2222
Q ss_pred HHHc------cccchhhh-CCCCCEEEecCCCCHHHH-HHHHHHHHhcC
Q 001973 218 SVLY------GDLGAVSA-LSSGASIILSSTVSPGFV-SQLERRLQFEG 258 (988)
Q Consensus 218 ~vl~------~~~~i~~~-l~~g~ivId~st~~p~~~-~~l~~~l~~~~ 258 (988)
.... +.-+++.. ++...+|..+.|..-.|+ .-++..+...+
T Consensus 100 ~a~~~gi~v~~~~e~l~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 148 (494)
T 4hv4_A 100 AAREARIPVIRRAEMLAELMRYRHGIAVAGTHGKTTTTAMLSSIYAEAG 148 (494)
T ss_dssp HHHHTTCCEEEHHHHHHHHHTTSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHHCCCCEEcHHHHHHHHhcCCCEEEEecCCChHHHHHHHHHHHHhcC
Confidence 2211 00122222 233334555555555544 45566666643
No 422
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.37 E-value=0.031 Score=62.31 Aligned_cols=54 Identities=19% Similarity=0.223 Sum_probs=36.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCC----CeE-EEEeCChhHHHHHHhc--CCcccCCHHHHhcc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSN----FTV-IGYDVYRPTLTKFQNV--GGLIANSPAEAAKD 202 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G----~~V-~v~dr~~~~~~~l~~~--G~~~~~s~~e~~~~ 202 (988)
++||||||+|.||+.++..|.++. .+| .++|+++.. +.+. |+..++++.+.+++
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~~~~~---~~~~~~gi~~~~~~~e~l~~ 64 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSL---ISKDFSPLNVGSDWKAALAA 64 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEE---ECSSCSCCSCTTCHHHHHHT
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEECChhh---hccccCCCCccccHHHHHhc
Confidence 369999999999999999999863 343 455754421 2222 55545677776654
No 423
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=94.34 E-value=0.1 Score=55.20 Aligned_cols=92 Identities=13% Similarity=0.041 Sum_probs=56.6
Q ss_pred hcCCCCCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHH
Q 001973 141 AKSNSVTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESV 219 (988)
Q Consensus 141 m~~~~~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~v 219 (988)
|+..+.++|-|.| .|.+|..+|+.|++.|++|++.+|+.++.+.+.+. +.+.-..+.++..=+.+...++.+
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~v~~~ 96 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVERE-------IVAAGGEAESHACDLSHSDAIAAF 96 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTCEEEEEECCTTCHHHHHHH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHHhCCceeEEEecCCCHHHHHHH
Confidence 4444445677776 58999999999999999999999999887665432 111111122222334455556665
Q ss_pred HccccchhhhCCCCCEEEecCCC
Q 001973 220 LYGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 220 l~~~~~i~~~l~~g~ivId~st~ 242 (988)
+ +.+.....+=+++|++...
T Consensus 97 ~---~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 97 A---TGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp H---HHHHHHHSCCSEEEECCCC
T ss_pred H---HHHHHhcCCCCEEEECCCc
Confidence 5 3444444444677776554
No 424
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=94.33 E-value=0.019 Score=64.14 Aligned_cols=84 Identities=13% Similarity=0.210 Sum_probs=61.6
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCC---eEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNF---TVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~---~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
..||.|||. |..|..-+..+...|. +|++||+++.. .|..+ +.+.++|+||-|+.-....-.++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~------~g~~~-----~~i~~aDivIn~vlig~~aP~Lvt 282 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETS------RGGPF-----DEIPQADIFINCIYLSKPIAPFTN 282 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHT------TCSCC-----THHHHSSEEEECCCCCSSCCCSCC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccc------cCCch-----hhHhhCCEEEECcCcCCCCCcccC
Confidence 458999999 9999999999999998 99999988632 14332 346699999999985221111111
Q ss_pred cccchhhhC-CCCCEEEecCCC
Q 001973 222 GDLGAVSAL-SSGASIILSSTV 242 (988)
Q Consensus 222 ~~~~i~~~l-~~g~ivId~st~ 242 (988)
++.++.+ ++|.+|||.|.-
T Consensus 283 --~e~v~~m~k~gsVIVDVA~D 302 (394)
T 2qrj_A 283 --MEKLNNPNRRLRTVVDVSAD 302 (394)
T ss_dssp --HHHHCCTTCCCCEEEETTCC
T ss_pred --HHHHhcCcCCCeEEEEEecC
Confidence 3445567 899999999853
No 425
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=94.16 E-value=0.17 Score=53.36 Aligned_cols=84 Identities=12% Similarity=0.078 Sum_probs=54.8
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.+++-|.| .|-+|.++|+.|++.|++|.+.+|+.++.+++.+. .-....++-.=+.++.+++.++ +
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~v~~~~---~ 74 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE----------IGPAAYAVQMDVTRQDSIDAAI---A 74 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------HCTTEEEEECCTTCHHHHHHHH---H
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------hCCCceEEEeeCCCHHHHHHHH---H
Confidence 34666666 58999999999999999999999999887765532 0011122222345555666665 4
Q ss_pred chhhhCCCCCEEEecCCC
Q 001973 225 GAVSALSSGASIILSSTV 242 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~ 242 (988)
.+.+...+=+++|++...
T Consensus 75 ~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 75 ATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp HHHHHSSSCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 444555455677776654
No 426
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.02 E-value=0.068 Score=59.03 Aligned_cols=36 Identities=31% Similarity=0.404 Sum_probs=32.1
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChh
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRP 180 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~ 180 (988)
++|+|.|.| .|.+|..++..|.+.|++|++.+|++.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 357999999 599999999999999999999999643
No 427
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=94.01 E-value=0.076 Score=55.32 Aligned_cols=40 Identities=20% Similarity=0.153 Sum_probs=35.5
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhC--CCeEEEEeCChhHHHHH
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRS--NFTVIGYDVYRPTLTKF 185 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l 185 (988)
+++|.|.| .|.+|..+++.|++. |++|++.+|++++.+.+
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~ 46 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI 46 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc
Confidence 46899998 699999999999999 89999999998876654
No 428
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=93.97 E-value=0.055 Score=57.90 Aligned_cols=65 Identities=18% Similarity=0.208 Sum_probs=48.3
Q ss_pred CeEEEEcc-chHHHHHHHHHHhC--CCeEEEEeCChhHHHHHHhcCCcc----c---CCHHHHhccCcEEEEEcC
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRS--NFTVIGYDVYRPTLTKFQNVGGLI----A---NSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~G~~~----~---~s~~e~~~~aDvV~l~vp 211 (988)
|+|.|.|. |.+|+.++..|.+. ||+|++.+|++++.+.+...++.. . +++.++++++|+||-+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 47899987 99999999999998 999999999988777665544432 1 123345566777776654
No 429
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=93.92 E-value=0.056 Score=58.72 Aligned_cols=62 Identities=13% Similarity=0.082 Sum_probs=42.7
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc------cCCHHHHhccCcEEEEEcC
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI------ANSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~------~~s~~e~~~~aDvV~l~vp 211 (988)
|+|.|.| .|.+|+.++..|.+.|++|++.+|++...+ +. ++.. .+++.++++++|+||-+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence 6899999 699999999999999999999999955444 32 2211 2234445566677666543
No 430
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.91 E-value=0.029 Score=61.27 Aligned_cols=82 Identities=13% Similarity=-0.008 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHcCCCHH--HHHHHHhhccCCchhhhccccccccCCCCc-chHHHHHHhHHHHHHHHHhcCCCCcH
Q 001973 9 VHLIASVEAISLGVQFGIHPW--VLYDIISNAAGNSWIFKNYIPNLLRGDAKL-HFLNAFIQNLGIALDMAKTLAFPLPL 85 (988)
Q Consensus 9 ~~~~~~aEal~la~~~Gld~~--~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-f~l~l~~KDl~la~~~a~~~g~~~p~ 85 (988)
....++.|++.++++.|++++ .+.+.+.... .......+.|+ .|+.+ +.++.- -.++++.++|++.|+++|+
T Consensus 229 ~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~---~~~~~~~~sm~-~d~~~g~~~E~~-~~~g~~~~~a~~~gv~~P~ 303 (317)
T 2qyt_A 229 ELLSLLEEVAELFRAKYGQVPDDVVQQLLDKQR---KMPPESTSSMH-SDFLQGGSTEVE-TLTGYVVREAEALRVDLPM 303 (317)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCSSHHHHHHHHHH---HC---------------------C-TTTHHHHHHHHHTTCCCHH
T ss_pred HHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHh---ccCCCCCChHH-HHHHcCCccCHH-HHhhHHHHHHHHcCCCCCH
Confidence 455899999999999999974 7788876532 11122234444 35555 443222 2388999999999999999
Q ss_pred HHHHHHHHHH
Q 001973 86 LAVAHQQLIL 95 (988)
Q Consensus 86 ~~~~~~~~~~ 95 (988)
.+.+.+.+..
T Consensus 304 ~~~~~~~~~~ 313 (317)
T 2qyt_A 304 YKRMYRELVS 313 (317)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHHHHH
Confidence 9998887653
No 431
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.73 E-value=0.12 Score=56.57 Aligned_cols=42 Identities=21% Similarity=0.243 Sum_probs=36.7
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQ 186 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~ 186 (988)
+.|+|.|.|. |.+|+.++..|++.|++|++.+|++++.+.+.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ 52 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHH
Confidence 3478999987 99999999999999999999999988765543
No 432
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.65 E-value=0.059 Score=60.58 Aligned_cols=102 Identities=18% Similarity=0.194 Sum_probs=70.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHc--CCCHHHHHH------HHhhccC-Cchhhhcccccccc-CC-CCc---------ch
Q 001973 2 VNDLLEGVHLIASVEAISLGVQF--GIHPWVLYD------IISNAAG-NSWIFKNYIPNLLR-GD-AKL---------HF 61 (988)
Q Consensus 2 ~nN~l~~~~~~~~aEal~la~~~--Gld~~~~~~------~l~~~~~-~s~~~~~~~~~~~~-~~-~~~---------f~ 61 (988)
.+|...+....++.|++.++++. |++++.+.+ .+..... .++. .++.+.. ++ ++. +.
T Consensus 242 ~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~~~~~~~---~~~~~~~~g~~~~~~d~~~~~~~g~ 318 (375)
T 1yj8_A 242 PTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFLAGRNAK---CSAEFIKSTPKKTWEELENEILKGQ 318 (375)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHSSSSHHH---HHHHHHHHTTSSCHHHHHHHHHTTC
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeeeCCccHH---HHHHHHhcCCCCCHHHHHHhhcCCc
Confidence 47888899999999999999999 699988753 3443332 2221 1333333 31 221 22
Q ss_pred HHHHHHhHHHHHHHHHhcCC--CCcHHHHHHHHHHHHhhCcCCCCCchhHHHHH
Q 001973 62 LNAFIQNLGIALDMAKTLAF--PLPLLAVAHQQLILGLSHAHANDDNPPLVKVW 113 (988)
Q Consensus 62 l~l~~KDl~la~~~a~~~g~--~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~ 113 (988)
.....||++.+.++|++.|+ ++|+.+.+.+.+. ++.+...+++.+
T Consensus 319 ~~E~~~~~~~v~~~a~~~gv~~~~P~~~~v~~~~~-------~~~~~~~~~~~l 365 (375)
T 1yj8_A 319 KLQGTVTLKYVYHMIKEKNMTNEFPLFTVLHKISF-------ENEDPSSLLKTF 365 (375)
T ss_dssp CCHHHHHHHHHHHHHHHTTCGGGCHHHHHHHHHHH-------SCCCTTHHHHHH
T ss_pred EeeHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHh-------CCCCHHHHHHHH
Confidence 34678999999999999999 9999999988876 334555555544
No 433
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=93.61 E-value=0.24 Score=51.96 Aligned_cols=83 Identities=16% Similarity=0.158 Sum_probs=53.1
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+++-|.| .|-+|.++|+.|++.|++|.+.+|+++..+++.+. .-.....+-.=+.++.+++.++ +.
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~Dv~d~~~v~~~~---~~ 76 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY----------LGDNGKGMALNVTNPESIEAVL---KA 76 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH----------HGGGEEEEECCTTCHHHHHHHH---HH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----------hcccceEEEEeCCCHHHHHHHH---HH
Confidence 4555555 57899999999999999999999999887765432 0011122222345556666665 34
Q ss_pred hhhhCCCCCEEEecCCC
Q 001973 226 AVSALSSGASIILSSTV 242 (988)
Q Consensus 226 i~~~l~~g~ivId~st~ 242 (988)
+.+...+=+++|++...
T Consensus 77 ~~~~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 77 ITDEFGGVDILVNNAGI 93 (248)
T ss_dssp HHHHHCCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 44444444677776553
No 434
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=93.59 E-value=0.27 Score=52.38 Aligned_cols=85 Identities=13% Similarity=0.165 Sum_probs=53.8
Q ss_pred CeEEEE--ccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 147 TRVGFI--GLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 147 ~kIgiI--G~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.|+.+| |.|-+|.++|+.|++.|++|++.+|+.+..+++.+. ..+.-..+..+..=+.+..+++.++ +
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~d~~~v~~~~---~ 97 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAA-------FKQAGLEGRGAVLNVNDATAVDALV---E 97 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-------HHHHTCCCEEEECCTTCHHHHHHHH---H
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhcCCcEEEEEEeCCCHHHHHHHH---H
Confidence 355555 568899999999999999999999999887665432 1111112333333445566666665 3
Q ss_pred chhhhCCCCCEEEecCC
Q 001973 225 GAVSALSSGASIILSST 241 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st 241 (988)
.+.+...+=+++|++..
T Consensus 98 ~~~~~~g~iD~lvnnAg 114 (270)
T 3ftp_A 98 STLKEFGALNVLVNNAG 114 (270)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 44444444467777654
No 435
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=93.57 E-value=0.19 Score=53.29 Aligned_cols=89 Identities=15% Similarity=0.025 Sum_probs=52.0
Q ss_pred HHhhhcCCCCCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHH-HHhcCCcccCCHHHHhccCcEEEEEcCChH
Q 001973 137 KQITAKSNSVTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTK-FQNVGGLIANSPAEAAKDVGVLVIMVTNEA 214 (988)
Q Consensus 137 ~~~~m~~~~~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~-l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~ 214 (988)
+.++||..+.++|-|.| .|-+|.++|+.|++.|++|++.+|++++..+ +.+.+ +.++-.=+.+..
T Consensus 18 ~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------~~~~~~Dv~~~~ 84 (260)
T 3gem_A 18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG-------------AVALYGDFSCET 84 (260)
T ss_dssp ---------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT-------------CEEEECCTTSHH
T ss_pred ccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC-------------CeEEECCCCCHH
Confidence 34444444445677776 4889999999999999999999999876432 22222 222333345556
Q ss_pred HHHHHHccccchhhhCCCCCEEEecCC
Q 001973 215 QAESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 215 ~~~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
.++.++ +.+.....+=+++|++..
T Consensus 85 ~v~~~~---~~~~~~~g~iD~lv~nAg 108 (260)
T 3gem_A 85 GIMAFI---DLLKTQTSSLRAVVHNAS 108 (260)
T ss_dssp HHHHHH---HHHHHHCSCCSEEEECCC
T ss_pred HHHHHH---HHHHHhcCCCCEEEECCC
Confidence 666665 344444444467777654
No 436
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=93.56 E-value=0.21 Score=55.28 Aligned_cols=89 Identities=18% Similarity=0.223 Sum_probs=54.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhC-CCeEEEEe--C-ChhHHHHHHhc----C-------------------Cccc--CCH
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRS-NFTVIGYD--V-YRPTLTKFQNV----G-------------------GLIA--NSP 196 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~-G~~V~v~d--r-~~~~~~~l~~~----G-------------------~~~~--~s~ 196 (988)
++||||+|.|++|..+.+.|.++ .++|...+ + +.+....+.+. | +.+. .++
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp 96 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDP 96 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCG
T ss_pred ceEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCCh
Confidence 36999999999999999999887 57766554 2 33333333211 0 0111 144
Q ss_pred HHHh---ccCcEEEEEcCChHHHHHHHccccchhhhCCCCC--EEEecCC
Q 001973 197 AEAA---KDVGVLVIMVTNEAQAESVLYGDLGAVSALSSGA--SIILSST 241 (988)
Q Consensus 197 ~e~~---~~aDvV~l~vp~~~~~~~vl~~~~~i~~~l~~g~--ivId~st 241 (988)
.+.. .++|+||.|+|.....+.. ..++..|. +|||.+.
T Consensus 97 ~~i~w~~~~vDvV~eatg~~~s~e~a-------~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 97 AEIPWGASGAQIVCESTGVFTTEEKA-------SLHLKGGAKKVIISAPP 139 (354)
T ss_dssp GGCCHHHHTCCEEEECSSSCCSHHHH-------GGGGTTTCSEEEESSCC
T ss_pred HHCCcccCCCCEEEECCCchhhHHHH-------HHHHHcCCcEEEEeCCC
Confidence 4431 4789999999875543322 23455566 8888765
No 437
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.55 E-value=0.052 Score=61.14 Aligned_cols=34 Identities=29% Similarity=0.392 Sum_probs=31.9
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCChh
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRP 180 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~ 180 (988)
|||.|||.|..|..+|..|+++|++|++|+++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 6999999999999999999999999999998753
No 438
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.55 E-value=0.15 Score=56.46 Aligned_cols=71 Identities=17% Similarity=0.077 Sum_probs=52.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCCccc-----CCHHHHhc------cCcEEEEEcCChH
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGGLIA-----NSPAEAAK------DVGVLVIMVTNEA 214 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~~~-----~s~~e~~~------~aDvV~l~vp~~~ 214 (988)
.+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|+... .+..+.+. ..|+||-++..+.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g~~~ 248 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPK 248 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSCCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCCCHH
Confidence 589999999999999999999999 99999999999888887776421 12222221 3566776666544
Q ss_pred HHH
Q 001973 215 QAE 217 (988)
Q Consensus 215 ~~~ 217 (988)
.++
T Consensus 249 ~~~ 251 (348)
T 2d8a_A 249 ALE 251 (348)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 439
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=93.49 E-value=0.35 Score=56.80 Aligned_cols=112 Identities=19% Similarity=0.177 Sum_probs=70.4
Q ss_pred CeEEEEccchHHHH-HHHHHHhCCCeEEEEeCCh--hHHHHHHhcCCccc--CCHHHHhccCcEEEEEc--CC-hHHHHH
Q 001973 147 TRVGFIGLGAMGFG-MATHLLRSNFTVIGYDVYR--PTLTKFQNVGGLIA--NSPAEAAKDVGVLVIMV--TN-EAQAES 218 (988)
Q Consensus 147 ~kIgiIG~G~mG~~-lA~~L~~~G~~V~v~dr~~--~~~~~l~~~G~~~~--~s~~e~~~~aDvV~l~v--p~-~~~~~~ 218 (988)
++|-|||.|-.|.+ +|+.|.+.|++|+++|.+. ...+.|.+.|+.+. .++.....++|+|+.+- |. ...++.
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~p~l~~ 99 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGMDVIEY 99 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTSHHHHH
T ss_pred CEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCCHHHHH
Confidence 69999999999986 7888999999999999863 45677888888653 33444446789998863 32 222332
Q ss_pred HHc------cccchh-hhC-CCCCEEEecCCCCHHHHH-HHHHHHHhcC
Q 001973 219 VLY------GDLGAV-SAL-SSGASIILSSTVSPGFVS-QLERRLQFEG 258 (988)
Q Consensus 219 vl~------~~~~i~-~~l-~~g~ivId~st~~p~~~~-~l~~~l~~~~ 258 (988)
... +..+++ ..+ +...+|..+.|..-.|+. -++..+...+
T Consensus 100 a~~~gi~v~~~~e~l~~~~~~~~~vIaVTGTnGKTTTt~li~~iL~~~G 148 (524)
T 3hn7_A 100 MLDTGLRYTSGPQFLSEQVLQSRHVIAVAGTHGKTTTTTMLAWILHYAG 148 (524)
T ss_dssp HHHHTCCEEEHHHHHHHHTGGGSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred HHHCCCcEEEHHHHHHHHHhccCcEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 211 111222 222 233455556555555554 4566666643
No 440
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.48 E-value=0.047 Score=60.69 Aligned_cols=91 Identities=10% Similarity=0.060 Sum_probs=63.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHcCC---CHHHHHH------HHhhccCCchhhhccccccccCCCCc---------chHH
Q 001973 2 VNDLLEGVHLIASVEAISLGVQFGI---HPWVLYD------IISNAAGNSWIFKNYIPNLLRGDAKL---------HFLN 63 (988)
Q Consensus 2 ~nN~l~~~~~~~~aEal~la~~~Gl---d~~~~~~------~l~~~~~~s~~~~~~~~~~~~~~~~~---------f~l~ 63 (988)
.+|...+....++.|++.++++.|+ +++.+.+ .+..... |... ..++.+.++.++. +...
T Consensus 225 ~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (354)
T 1x0v_A 225 GDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADLITTCYG-GRNR-KVAEAFARTGKSIEQLEKELLNGQKL 302 (354)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHHHHHHHH-CHHH-HHHHHHHHHCCCHHHHHHHHSTTCCC
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHHHHhhcc-cccH-HHHHHHHhcCCCHHHHHHhhcCCcEe
Confidence 4788888999999999999999999 8887643 3333222 2111 1233443312221 2233
Q ss_pred HHHHhHHHHHHHHHhcCC--CCcHHHHHHHHHH
Q 001973 64 AFIQNLGIALDMAKTLAF--PLPLLAVAHQQLI 94 (988)
Q Consensus 64 l~~KDl~la~~~a~~~g~--~~p~~~~~~~~~~ 94 (988)
...||++.+.++|++.|+ ++|+.+.+.+.+.
T Consensus 303 E~~~~~g~v~~~a~~~gv~~~~P~~~~v~~~~~ 335 (354)
T 1x0v_A 303 QGPETARELYSILQHKGLVDKFPLFMAVYKVCY 335 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCGGGSHHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHh
Confidence 467999999999999999 9999999988876
No 441
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.43 E-value=0.096 Score=58.34 Aligned_cols=103 Identities=17% Similarity=0.041 Sum_probs=72.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------HHhhccCCchhhhcc--ccccccCCCCc-------chHHHH
Q 001973 1 MVNDLLEGVHLIASVEAISLGVQFGIHPWVLYD------IISNAAGNSWIFKNY--IPNLLRGDAKL-------HFLNAF 65 (988)
Q Consensus 1 L~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~------~l~~~~~~s~~~~~~--~~~~~~~~~~~-------f~l~l~ 65 (988)
+.+|...+....+++|...++++.|+++++|.+ .+...+ |+..+++ +..+-+| ++. ..+.-.
T Consensus 231 ~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~--s~~sRN~~~G~~l~~g-~~~~~~~~~~~~~~eG 307 (356)
T 3k96_A 231 LGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCT--DNQSRNRRFGLALGEG-VDKKEAQQAIGQAIEG 307 (356)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHH--CTTCHHHHHHHHHHHT-CCHHHHHHHHCSCCSH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhcc--CCCCccHHHHHHHHCC-CCHHHHHHHcCCccch
Confidence 357899999999999999999999999999885 333221 2333333 2233333 221 234567
Q ss_pred HHhHHHHHHHHHhcCCCCcHHHHHHHHHHHHhhCcCCCCCchhHHHHH
Q 001973 66 IQNLGIALDMAKTLAFPLPLLAVAHQQLILGLSHAHANDDNPPLVKVW 113 (988)
Q Consensus 66 ~KDl~la~~~a~~~g~~~p~~~~~~~~~~~a~~~G~g~~D~~~~~~~~ 113 (988)
.|+.+.+.+++++.|++||+.+.+.+++. ++.+....++.+
T Consensus 308 ~~t~~~~~~la~~~~v~~Pi~~~v~~il~-------~~~~~~~~~~~l 348 (356)
T 3k96_A 308 LYNTDQVHALAQKHAIEMPLTFQVHRILH-------EDLDPQQAVQEL 348 (356)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHH-------SCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCcHHHHHHHHHh-------CCCCHHHHHHHH
Confidence 89999999999999999999999988875 344554444433
No 442
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=93.41 E-value=0.036 Score=57.76 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=33.1
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCC--eEEEEeCChhHH
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNF--TVIGYDVYRPTL 182 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~--~V~v~dr~~~~~ 182 (988)
.|+|.|.| .|.+|..++..|++.|+ +|++.+|++++.
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~ 57 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTF 57 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCc
Confidence 46899998 69999999999999999 999999987653
No 443
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.40 E-value=0.12 Score=55.62 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=37.5
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN 187 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 187 (988)
.+++-|+| .|-+|.+++..|++.|++|++++|++++.+++.+
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~ 161 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD 161 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH
Confidence 35899999 9999999999999999999999999988776653
No 444
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=93.34 E-value=0.26 Score=51.69 Aligned_cols=41 Identities=22% Similarity=0.138 Sum_probs=34.3
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHH
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKF 185 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l 185 (988)
+.++|-|.| .|.+|..+++.|++.|++|++.+|++++.+.+
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~ 53 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKA 53 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 345677775 58999999999999999999999998776554
No 445
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=93.32 E-value=0.24 Score=52.92 Aligned_cols=88 Identities=15% Similarity=0.024 Sum_probs=54.2
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccc
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGD 223 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~ 223 (988)
+.+++-|.| .|-+|.++|+.|++.|++|++.+|+++..+++.+. +.+.-..+.++-.=+.+..+++.++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~Dl~d~~~v~~~~--- 100 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADE-------IAGVGGKALPIRCDVTQPDQVRGML--- 100 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-------HHHTTCCCEEEECCTTCHHHHHHHH---
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhcCCeEEEEEcCCCCHHHHHHHH---
Confidence 345666666 58899999999999999999999998877665432 1111112222222345555666665
Q ss_pred cchhhhCCCCCEEEecCCC
Q 001973 224 LGAVSALSSGASIILSSTV 242 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~ 242 (988)
+.+.+...+=+++|++...
T Consensus 101 ~~~~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 101 DQMTGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHHHHSCCSEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 3444444344666766543
No 446
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.30 E-value=0.36 Score=54.10 Aligned_cols=74 Identities=18% Similarity=0.202 Sum_probs=54.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCCccc-------CCHHHHhc-----cCcEEEEEcCC
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGGLIA-------NSPAEAAK-----DVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~~~-------~s~~e~~~-----~aDvV~l~vp~ 212 (988)
..+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|+... .+..+.+. ..|+||-|+..
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g~ 273 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGN 273 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCCC
Confidence 4589999999999999998888998 89999999999998888887432 22222222 36777777766
Q ss_pred hHHHHHH
Q 001973 213 EAQAESV 219 (988)
Q Consensus 213 ~~~~~~v 219 (988)
+..++..
T Consensus 274 ~~~~~~~ 280 (378)
T 3uko_A 274 VSVMRAA 280 (378)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5544433
No 447
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=93.25 E-value=0.15 Score=53.81 Aligned_cols=33 Identities=30% Similarity=0.319 Sum_probs=30.3
Q ss_pred CeEEEEccchHHHHHHHHHHhCCC-eEEEEeCCh
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYR 179 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~ 179 (988)
.+|.|||+|.+|+.++.+|+..|. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 599999999999999999999996 799998775
No 448
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.22 E-value=0.075 Score=60.05 Aligned_cols=42 Identities=26% Similarity=0.275 Sum_probs=34.2
Q ss_pred hhhcCCCCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChh
Q 001973 139 ITAKSNSVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRP 180 (988)
Q Consensus 139 ~~m~~~~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~ 180 (988)
.+|.+++..+|.|||.|..|..+|..|++.|++|+++++++.
T Consensus 19 ~~M~~~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 19 SHMNLLSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp ----CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred ccccccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 335445567999999999999999999999999999998753
No 449
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.17 E-value=0.24 Score=54.14 Aligned_cols=87 Identities=11% Similarity=0.081 Sum_probs=53.9
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEE--EcCChHHHHHHHc
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVI--MVTNEAQAESVLY 221 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l--~vp~~~~~~~vl~ 221 (988)
+.++|-|.|. |.+|..+|+.|++.|++|++.+|++++.+++.+. +........+.++ =+.+...++.++
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~Dl~~~~~v~~~~- 78 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALAT-------LEAEGSGPEVMGVQLDVASREGFKMAA- 78 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHHTCGGGEEEEECCTTCHHHHHHHH-
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhcCCCCeEEEEECCCCCHHHHHHHH-
Confidence 3456777765 8999999999999999999999999887765432 1111111122222 244555566655
Q ss_pred cccchhhhCCCCCEEEecCC
Q 001973 222 GDLGAVSALSSGASIILSST 241 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st 241 (988)
+.+.....+=+++|++..
T Consensus 79 --~~~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 79 --DEVEARFGPVSILCNNAG 96 (319)
T ss_dssp --HHHHHHTCCEEEEEECCC
T ss_pred --HHHHHhCCCCCEEEECCC
Confidence 344443333356666654
No 450
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=93.14 E-value=0.3 Score=52.18 Aligned_cols=89 Identities=13% Similarity=0.110 Sum_probs=58.5
Q ss_pred hcCCCCCeEEEEcc-ch--HHHHHHHHHHhCCCeEEEEeCCh--hHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHH
Q 001973 141 AKSNSVTRVGFIGL-GA--MGFGMATHLLRSNFTVIGYDVYR--PTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQ 215 (988)
Q Consensus 141 m~~~~~~kIgiIG~-G~--mG~~lA~~L~~~G~~V~v~dr~~--~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~ 215 (988)
|...+.++|-|.|. |. +|.++|+.|++.|++|.+.+|+. +..+++.+.+. ...++-.=+.+...
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~-----------~~~~~~~Dl~~~~~ 89 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFN-----------PAAVLPCDVISDQE 89 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGC-----------CSEEEECCTTCHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcC-----------CceEEEeecCCHHH
Confidence 44444567777785 55 99999999999999999999987 55565554321 12233333456666
Q ss_pred HHHHHccccchhhhCCCCCEEEecCCCC
Q 001973 216 AESVLYGDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 216 ~~~vl~~~~~i~~~l~~g~ivId~st~~ 243 (988)
++.++ +.+.....+=+++|++....
T Consensus 90 v~~~~---~~~~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 90 IKDLF---VELGKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp HHHHH---HHHHHHCSSCCEEEECCCCC
T ss_pred HHHHH---HHHHHHcCCCCEEEECCccC
Confidence 77766 45555555557788776543
No 451
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.09 E-value=0.11 Score=59.65 Aligned_cols=64 Identities=19% Similarity=0.099 Sum_probs=48.4
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHH--HHHHhcCCccc--CCHHHHhccCcEEEEEc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTL--TKFQNVGGLIA--NSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~--~~l~~~G~~~~--~s~~e~~~~aDvV~l~v 210 (988)
.+||.|||+|..|.+.|+.|.+.||+|+++|.+.... ..+. .|+.+. ....+.++.+|.|+++.
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASP 72 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCC
Confidence 3589999999999999999999999999999764321 3344 576652 21355666899988874
No 452
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.04 E-value=0.073 Score=55.14 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=31.0
Q ss_pred CeEEEEccchHHHHHHHHHHhCCCeEEEEeCCh
Q 001973 147 TRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYR 179 (988)
Q Consensus 147 ~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 179 (988)
..|.|||+|.-|...|..|+++|++|+++++++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 469999999999999999999999999999865
No 453
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.04 E-value=0.47 Score=53.04 Aligned_cols=46 Identities=17% Similarity=0.299 Sum_probs=41.0
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|. +|++.++++++.+.+.+.|+.
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 242 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 242 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 3589999999999999998888998 899999999999988887764
No 454
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.98 E-value=0.31 Score=51.53 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=53.9
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEE--EcCChHHHHHHHccc
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVI--MVTNEAQAESVLYGD 223 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l--~vp~~~~~~~vl~~~ 223 (988)
+++-|.|. |-+|.++|..|++.|++|++.+|++++.+++.+. +.+. ..++.++ =+.++.+++.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~--~~~~~~~~~Dv~~~~~v~~~~--- 79 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQ-------VTDT--GRRALSVGTDITDDAQVAHLV--- 79 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHT--TCCEEEEECCTTCHHHHHHHH---
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH-------HHhc--CCcEEEEEcCCCCHHHHHHHH---
Confidence 45666664 6799999999999999999999999887765432 1111 1223332 345556666665
Q ss_pred cchhhhCCCCCEEEecCC
Q 001973 224 LGAVSALSSGASIILSST 241 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st 241 (988)
+.+.+...+=+++|++..
T Consensus 80 ~~~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 80 DETMKAYGRVDVVINNAF 97 (264)
T ss_dssp HHHHHHTSCCSEEEECCC
T ss_pred HHHHHHcCCCcEEEECCC
Confidence 445555545567777653
No 455
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.96 E-value=0.52 Score=52.67 Aligned_cols=46 Identities=22% Similarity=0.419 Sum_probs=41.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|+.
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 238 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc
Confidence 3589999999999999998888998 899999999999988887764
No 456
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.96 E-value=0.49 Score=52.39 Aligned_cols=46 Identities=22% Similarity=0.101 Sum_probs=41.1
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|.+|++.++++++.+.+.+.|+.
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 214 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD 214 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC
Confidence 3589999999999999998888999999999999999888887763
No 457
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=92.95 E-value=0.048 Score=60.91 Aligned_cols=88 Identities=18% Similarity=0.205 Sum_probs=52.2
Q ss_pred CeEEEEc-cchHHHHHHH-HHHhCCC---eEEEEeCC-hhH-HHHHHhcCCccc--CCHHHHhccCcEEEEEcCChHHHH
Q 001973 147 TRVGFIG-LGAMGFGMAT-HLLRSNF---TVIGYDVY-RPT-LTKFQNVGGLIA--NSPAEAAKDVGVLVIMVTNEAQAE 217 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~-~L~~~G~---~V~v~dr~-~~~-~~~l~~~G~~~~--~s~~e~~~~aDvV~l~vp~~~~~~ 217 (988)
+||+|+| .|++|..+.+ .|.++++ .++.+..+ ..+ +..+......+. .++.+ .+++|+||.|+|.....+
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~~-~~~~DvVf~a~g~~~s~~ 80 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEA-LKALDIIVTCQGGDYTNE 80 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHH-HHTCSEEEECSCHHHHHH
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChHH-hcCCCEEEECCCchhHHH
Confidence 6999999 9999999999 5665654 34444332 111 101111122222 23444 578999999999755333
Q ss_pred HHHccccchhhhCCCCC--EEEecCCC
Q 001973 218 SVLYGDLGAVSALSSGA--SIILSSTV 242 (988)
Q Consensus 218 ~vl~~~~~i~~~l~~g~--ivId~st~ 242 (988)
.+ .. ++..|. +|||.|+.
T Consensus 81 ~a----~~---~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 81 IY----PK---LRESGWQGYWIDAASS 100 (367)
T ss_dssp HH----HH---HHHTTCCCEEEECSST
T ss_pred HH----HH---HHHCCCCEEEEcCChh
Confidence 22 12 223454 99998864
No 458
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=92.95 E-value=0.051 Score=58.68 Aligned_cols=58 Identities=16% Similarity=-0.016 Sum_probs=41.8
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEc
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~v 210 (988)
|||-|.|. |.+|+.++..|.+.||+|++..|+++..+ +.......+.++++|.|+-+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~~------~~~~~~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPGR------ITWDELAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTE------EEHHHHHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcCe------eecchhhHhhccCCCEEEEec
Confidence 69999997 99999999999999999999999865310 111111223456778777544
No 459
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=92.93 E-value=0.2 Score=52.69 Aligned_cols=83 Identities=20% Similarity=0.161 Sum_probs=47.7
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+++-|.| .|-+|.++|+.|++.|++|++.+|+++..+++.+. .-..+.++-.=+.+..+++.++ +.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~---~~ 74 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE----------LGAAVRFRNADVTNEADATAAL---AF 74 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------CEEEECCTTCHHHHHHHH---HH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH----------hCCceEEEEccCCCHHHHHHHH---HH
Confidence 3455555 58999999999999999999999998776554322 0112233333345555666665 34
Q ss_pred hhhhCCCCCEEEecCCC
Q 001973 226 AVSALSSGASIILSSTV 242 (988)
Q Consensus 226 i~~~l~~g~ivId~st~ 242 (988)
+.+...+=+++|++...
T Consensus 75 ~~~~~g~id~lv~nAg~ 91 (257)
T 3tpc_A 75 AKQEFGHVHGLVNCAGT 91 (257)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 44444344667766544
No 460
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.91 E-value=0.28 Score=54.11 Aligned_cols=46 Identities=17% Similarity=0.236 Sum_probs=41.5
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|.+|++.++++++.+.+.+.|+.
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 210 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGAD 210 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCC
Confidence 4689999999999999999999999999999999999888877753
No 461
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=92.90 E-value=0.06 Score=60.43 Aligned_cols=37 Identities=19% Similarity=0.235 Sum_probs=33.3
Q ss_pred CCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhH
Q 001973 145 SVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPT 181 (988)
Q Consensus 145 ~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~ 181 (988)
++|+|.|.|. |.+|..++..|++.||+|++.+|++..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 65 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNE 65 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCS
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCcc
Confidence 3579999997 999999999999999999999998654
No 462
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.85 E-value=0.5 Score=52.77 Aligned_cols=46 Identities=20% Similarity=0.342 Sum_probs=40.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|+.
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 238 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 238 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence 4589999999999999988888898 799999999999988888864
No 463
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.70 E-value=0.088 Score=58.04 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=43.0
Q ss_pred CCCCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcc-------cCCHHHHhccCcEEEEEc
Q 001973 144 NSVTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLI-------ANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 144 ~~~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~-------~~s~~e~~~~aDvV~l~v 210 (988)
.+.|+|.|.|. |.+|..++..|++.|++|++.+|+++. .++.. .++..++++++|+||-+.
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 34578999997 999999999999999999999998764 22221 112345566777777654
No 464
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=92.68 E-value=0.17 Score=59.09 Aligned_cols=64 Identities=28% Similarity=0.573 Sum_probs=49.7
Q ss_pred CCeEEEEccchHHHH-HHHHHHhCCCeEEEEeCChh-HHHHHHhcCCccc--CCHHHHhccCcEEEEEc
Q 001973 146 VTRVGFIGLGAMGFG-MATHLLRSNFTVIGYDVYRP-TLTKFQNVGGLIA--NSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~-lA~~L~~~G~~V~v~dr~~~-~~~~l~~~G~~~~--~s~~e~~~~aDvV~l~v 210 (988)
.++|.|||+|..|.+ +|+.|.+.|++|+++|.... ..+.|.+.|+.+. .+. +.++.+|+|+..-
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s~ 86 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRP-ENVRDASVVVVSS 86 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCG-GGGTTCSEEEECT
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCCCEEECCCCH-HHcCCCCEEEECC
Confidence 468999999999997 99999999999999997653 3456777787653 223 3456889888863
No 465
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=92.68 E-value=0.11 Score=61.00 Aligned_cols=64 Identities=20% Similarity=0.155 Sum_probs=47.9
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCC
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTN 212 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~ 212 (988)
+|||.|.| .|.+|+.++..|.+.||+|++.+|++.+.+.+ .....+...++++++|+||-+...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~v---~~d~~~~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKR---FWDPLNPASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTCE---ECCTTSCCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccce---eecccchhHHhcCCCCEEEECCCC
Confidence 57999999 69999999999999999999999987653211 111223445666788888877653
No 466
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.67 E-value=0.22 Score=52.60 Aligned_cols=87 Identities=15% Similarity=0.061 Sum_probs=55.8
Q ss_pred CCCeEEEEcc-c-hHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEE--EEcCChHHHHHHH
Q 001973 145 SVTRVGFIGL-G-AMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLV--IMVTNEAQAESVL 220 (988)
Q Consensus 145 ~~~kIgiIG~-G-~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~--l~vp~~~~~~~vl 220 (988)
+.+++-|.|. | -+|..+++.|++.|++|++.+|+.++.+++.+. +.+ ....++.+ .=+.+...++.++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~-~~~~~~~~~~~Dl~~~~~v~~~~ 92 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQ-------LAD-LGLGRVEAVVCDVTSTEAVDALI 92 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHT-TCSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHH-------HHh-cCCCceEEEEeCCCCHHHHHHHH
Confidence 4467888898 8 499999999999999999999999887665432 000 00122222 2344555666665
Q ss_pred ccccchhhhCCCCCEEEecCCC
Q 001973 221 YGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~st~ 242 (988)
+.+.+...+=+++|++...
T Consensus 93 ---~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 93 ---TQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp ---HHHHHHHSCCCEEEECCCC
T ss_pred ---HHHHHHhCCCcEEEECCCc
Confidence 3444444444677776553
No 467
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=92.61 E-value=0.33 Score=51.07 Aligned_cols=84 Identities=13% Similarity=0.107 Sum_probs=52.4
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.+++-|.| .|-+|.++|+.|++.|++|.+.+|++++.+++.+.- -..+.++-.=+.+...++.++ +
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dv~~~~~v~~~~---~ 74 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----------GPRVHALRSDIADLNEIAVLG---A 74 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTCHHHHHHHH---H
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------CCcceEEEccCCCHHHHHHHH---H
Confidence 34566665 578999999999999999999999998887765420 011222222244555566555 3
Q ss_pred chhhhCCCCCEEEecCCC
Q 001973 225 GAVSALSSGASIILSSTV 242 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~ 242 (988)
.+.....+=+++|++...
T Consensus 75 ~~~~~~g~id~lv~nAg~ 92 (255)
T 4eso_A 75 AAGQTLGAIDLLHINAGV 92 (255)
T ss_dssp HHHHHHSSEEEEEECCCC
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 333333333566665543
No 468
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=92.60 E-value=0.099 Score=57.42 Aligned_cols=38 Identities=21% Similarity=0.222 Sum_probs=33.3
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHH
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTL 182 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~ 182 (988)
++|+|-|.| .|.+|..++..|++.|++|++.+|+++..
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~ 42 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSK 42 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcch
Confidence 457999998 59999999999999999999999976543
No 469
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.59 E-value=0.62 Score=52.00 Aligned_cols=46 Identities=20% Similarity=0.297 Sum_probs=41.0
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|+.
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 239 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc
Confidence 3589999999999999998888998 799999999999988887864
No 470
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=92.55 E-value=0.16 Score=56.28 Aligned_cols=89 Identities=13% Similarity=0.190 Sum_probs=64.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCccc-CCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIA-NSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~-~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
..+|.|+|+|.+|...+..+...|.+|++.++++++.+.+.+.|+... .+..+..+..|+||-++..+..++..+
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~~~---- 252 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKDYL---- 252 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCHHHHH----
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHHHHHH----
Confidence 358999999999999999998999999999999999999988886432 333333336788888888764454443
Q ss_pred chhhhCCCCCEEEecCC
Q 001973 225 GAVSALSSGASIILSST 241 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st 241 (988)
..+.++-.++..+.
T Consensus 253 ---~~l~~~G~iv~~G~ 266 (348)
T 3two_A 253 ---KLLTYNGDLALVGL 266 (348)
T ss_dssp ---TTEEEEEEEEECCC
T ss_pred ---HHHhcCCEEEEECC
Confidence 23444445555443
No 471
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=92.53 E-value=0.45 Score=49.98 Aligned_cols=83 Identities=13% Similarity=0.149 Sum_probs=53.1
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.+++-|.|. |-+|.++|+.|++.|++|++.+|++++.+++.+. .-....++..=+.+..+++.++ +
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~---~ 75 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE----------IGDAALAVAADISKEADVDAAV---E 75 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------HCTTEEEEECCTTSHHHHHHHH---H
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH----------hCCceEEEEecCCCHHHHHHHH---H
Confidence 456777775 6899999999999999999999999888776542 0011122222344555555555 3
Q ss_pred chhhhCCCCCEEEecCC
Q 001973 225 GAVSALSSGASIILSST 241 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st 241 (988)
.+.+...+=+++|++..
T Consensus 76 ~~~~~~g~id~li~~Ag 92 (261)
T 3n74_A 76 AALSKFGKVDILVNNAG 92 (261)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHhcCCCCEEEECCc
Confidence 44343334456666654
No 472
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=92.51 E-value=0.024 Score=62.66 Aligned_cols=89 Identities=17% Similarity=0.236 Sum_probs=53.7
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCe---EEEEeCChhHHHH--HHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHH
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFT---VIGYDVYRPTLTK--FQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVL 220 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~---V~v~dr~~~~~~~--l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl 220 (988)
+||+||| .|+.|..|.+.|.++.|+ +..+.-+...-+. +......+.+-..+.++++|+||+|+|.....+.+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~a- 80 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQA- 80 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSCHHHHHHHH-
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCChHHHHHHH-
Confidence 5899999 899999999999998654 4444321110000 11001111111123357899999999976543322
Q ss_pred ccccchhhhCCCCCEEEecCCC
Q 001973 221 YGDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 221 ~~~~~i~~~l~~g~ivId~st~ 242 (988)
..++..|..|||.|+-
T Consensus 81 ------~~~~~~G~~vID~Sa~ 96 (344)
T 3tz6_A 81 ------PRFAAAGVTVIDNSSA 96 (344)
T ss_dssp ------HHHHHTTCEEEECSST
T ss_pred ------HHHHhCCCEEEECCCc
Confidence 1234568899999985
No 473
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=92.46 E-value=0.64 Score=48.56 Aligned_cols=87 Identities=11% Similarity=0.104 Sum_probs=55.2
Q ss_pred CCeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.+++-|.|. |.+|..+|+.|++.|++|++.+|+++..+++.+. ..+.-..+.++-.=+.++.+++.++ +
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~---~ 78 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQ-------IVADGGTAISVAVDVSDPESAKAMA---D 78 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTCEEEEEECCTTSHHHHHHHH---H
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-------HHhcCCcEEEEEccCCCHHHHHHHH---H
Confidence 346667665 8899999999999999999999999887765532 0110011222222344555666665 3
Q ss_pred chhhhCCCCCEEEecCCC
Q 001973 225 GAVSALSSGASIILSSTV 242 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st~ 242 (988)
.+.+...+=+++|++...
T Consensus 79 ~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 79 RTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 444444445677777654
No 474
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.45 E-value=0.1 Score=58.01 Aligned_cols=94 Identities=16% Similarity=0.226 Sum_probs=66.3
Q ss_pred CCCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCCh-------hHHHHH----Hhc-C-CcccCCHHHHhccCcEEEEEc
Q 001973 145 SVTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYR-------PTLTKF----QNV-G-GLIANSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 145 ~~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~-------~~~~~l----~~~-G-~~~~~s~~e~~~~aDvV~l~v 210 (988)
...||.|+|.|..|.++|+.+...|. +|+++|++- +.+..+ ... . .....++.|+++.+|++|=+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~~~~~~~L~eav~~ADV~IG~S 266 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNREFKSGTLEDALEGADIFIGVS 266 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTCCCSCCC---CHHHHHSCTTCCCSCSHHHHTTCSEEECC
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCcccCCccccchHHHHHHhhccCcccchhhHHHHhccCCEEEecC
Confidence 45699999999999999999999998 999999872 112221 111 1 112457999999999876553
Q ss_pred CChHHHHHHHccccchhhhCCCCCEEEecCCCCHH
Q 001973 211 TNEAQAESVLYGDLGAVSALSSGASIILSSTVSPG 245 (988)
Q Consensus 211 p~~~~~~~vl~~~~~i~~~l~~g~ivId~st~~p~ 245 (988)
. +. ++. +++.+.+.++.+|+++|+-.|+
T Consensus 267 a-pg----l~T--~EmVk~Ma~~pIIfalsNPt~E 294 (398)
T 2a9f_A 267 A-PG----VLK--AEWISKMAARPVIFAMANPIPE 294 (398)
T ss_dssp S-TT----CCC--HHHHHTSCSSCEEEECCSSSCS
T ss_pred C-CC----CCC--HHHHHhhCCCCEEEECCCCCcc
Confidence 3 33 111 3456677899999999987653
No 475
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=92.45 E-value=0.39 Score=50.03 Aligned_cols=86 Identities=16% Similarity=0.186 Sum_probs=54.4
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+++-|.| .|.+|..+|+.|++.|++|++.+|++++.+++.+. ..+.-..+.++-.=+.++..++.++ +.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~---~~ 75 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENS-------MKEKGFKARGLVLNISDIESIQNFF---AE 75 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-------HHHTTCCEEEEECCTTCHHHHHHHH---HH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhcCCceEEEEecCCCHHHHHHHH---HH
Confidence 4566665 58999999999999999999999999887765432 1110011222222345556666665 34
Q ss_pred hhhhCCCCCEEEecCCC
Q 001973 226 AVSALSSGASIILSSTV 242 (988)
Q Consensus 226 i~~~l~~g~ivId~st~ 242 (988)
+.....+=+++|++...
T Consensus 76 ~~~~~~~id~li~~Ag~ 92 (247)
T 3lyl_A 76 IKAENLAIDILVNNAGI 92 (247)
T ss_dssp HHHTTCCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 44444444677777654
No 476
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=92.42 E-value=0.31 Score=51.72 Aligned_cols=84 Identities=15% Similarity=0.147 Sum_probs=52.6
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEE--EEcCChHHHHHHHccc
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLV--IMVTNEAQAESVLYGD 223 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~--l~vp~~~~~~~vl~~~ 223 (988)
+++-|.|. |-+|.++|+.|++.|++|.+.+|++++.+++.+. +.+. ..++.+ .=+.+..+++.++
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------l~~~--~~~~~~~~~Dv~d~~~v~~~~--- 72 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATE-------IRDA--GGTALAQVLDVTDRHSVAAFA--- 72 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-------HHHT--TCEEEEEECCTTCHHHHHHHH---
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-------HHhc--CCcEEEEEcCCCCHHHHHHHH---
Confidence 45666664 7899999999999999999999999887765432 1111 122222 2244555666655
Q ss_pred cchhhhCCCCCEEEecCCC
Q 001973 224 LGAVSALSSGASIILSSTV 242 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~ 242 (988)
+.+.+...+=+++|++...
T Consensus 73 ~~~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 73 QAAVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 3444444444667766543
No 477
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=92.42 E-value=0.24 Score=52.07 Aligned_cols=41 Identities=22% Similarity=0.249 Sum_probs=34.0
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN 187 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 187 (988)
+++-|.| .|-+|.++|+.|++.|++|++.+|++++.+++.+
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVA 49 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 4566665 5689999999999999999999999988766543
No 478
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=92.38 E-value=0.089 Score=56.12 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=46.1
Q ss_pred eEEEEcc-chHHHHHHHHHHhC--CCeEEEEeCChhHHHHHHhcCCcc----c---CCHHHHhccCcEEEEEcC
Q 001973 148 RVGFIGL-GAMGFGMATHLLRS--NFTVIGYDVYRPTLTKFQNVGGLI----A---NSPAEAAKDVGVLVIMVT 211 (988)
Q Consensus 148 kIgiIG~-G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~G~~~----~---~s~~e~~~~aDvV~l~vp 211 (988)
+|.|.|. |.+|..++..|.+. |++|++.+|++++.+.+...++.. . +++.++++++|+||-+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4788986 99999999999998 999999999988776665544322 1 123345556677666543
No 479
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.35 E-value=0.59 Score=52.13 Aligned_cols=46 Identities=17% Similarity=0.369 Sum_probs=40.8
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|+.
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~ 237 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 3589999999999999998888898 899999999999888887764
No 480
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=92.35 E-value=0.27 Score=52.38 Aligned_cols=84 Identities=10% Similarity=0.002 Sum_probs=51.6
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEE--EcCChHHHHHHHccc
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVI--MVTNEAQAESVLYGD 223 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l--~vp~~~~~~~vl~~~ 223 (988)
+++-|.| .|-+|.++|+.|++.|++|.+.+|++++.+++.+. +.+. ..++.++ =+.+...++.++
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-------l~~~--~~~~~~~~~Dv~d~~~v~~~~--- 94 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQE-------FRNV--GHDAEAVAFDVTSESEIIEAF--- 94 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH-------HHHT--TCCEEECCCCTTCHHHHHHHH---
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHhc--CCceEEEEcCCCCHHHHHHHH---
Confidence 3454554 58999999999999999999999999887665432 0000 1122222 234455566655
Q ss_pred cchhhhCCCCCEEEecCCC
Q 001973 224 LGAVSALSSGASIILSSTV 242 (988)
Q Consensus 224 ~~i~~~l~~g~ivId~st~ 242 (988)
+.+.....+=+++|++...
T Consensus 95 ~~~~~~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 95 ARLDEQGIDVDILVNNAGI 113 (271)
T ss_dssp HHHHHHTCCCCEEEECCCC
T ss_pred HHHHHHCCCCCEEEECCCC
Confidence 3444444444677776553
No 481
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=92.32 E-value=0.38 Score=50.54 Aligned_cols=80 Identities=13% Similarity=0.036 Sum_probs=53.8
Q ss_pred eEEEE--ccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 148 RVGFI--GLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 148 kIgiI--G~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
|..+| |.+-+|.++|+.|++.|++|.+.||++++.+++.+++.. +..+-.=+.++.+++.++ +.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~-----------~~~~~~Dv~~~~~v~~~v---~~ 68 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPN-----------LFYFHGDVADPLTLKKFV---EY 68 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTT-----------EEEEECCTTSHHHHHHHH---HH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC-----------EEEEEecCCCHHHHHHHH---HH
Confidence 44455 577899999999999999999999999988877665421 111122245566666666 44
Q ss_pred hhhhCCCCCEEEecCC
Q 001973 226 AVSALSSGASIILSST 241 (988)
Q Consensus 226 i~~~l~~g~ivId~st 241 (988)
+.+...+=+++|+...
T Consensus 69 ~~~~~g~iDiLVNNAG 84 (247)
T 3ged_A 69 AMEKLQRIDVLVNNAC 84 (247)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 5555444467776653
No 482
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=92.31 E-value=0.34 Score=52.31 Aligned_cols=52 Identities=12% Similarity=-0.003 Sum_probs=34.8
Q ss_pred hHHHhhhcCCCCCeEEEE-ccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHH
Q 001973 135 LAKQITAKSNSVTRVGFI-GLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQ 186 (988)
Q Consensus 135 ~~~~~~m~~~~~~kIgiI-G~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~ 186 (988)
......||..+.+++-|. |.|.+|..+|+.|++.|++|++.+|++++.+++.
T Consensus 15 ~~~~~~m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~ 67 (297)
T 1xhl_A 15 VPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETK 67 (297)
T ss_dssp --------CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred ccccccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 333334544344455555 5689999999999999999999999988776543
No 483
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=92.29 E-value=0.51 Score=52.33 Aligned_cols=46 Identities=20% Similarity=0.181 Sum_probs=40.9
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC-eEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF-TVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|+.
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~ 218 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD 218 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC
Confidence 3589999999999999988888998 899999999999888887764
No 484
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=92.29 E-value=0.32 Score=51.99 Aligned_cols=86 Identities=12% Similarity=0.024 Sum_probs=52.3
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhc-cCcEEEE--EcCChHHHHHHHcc
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAK-DVGVLVI--MVTNEAQAESVLYG 222 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~-~aDvV~l--~vp~~~~~~~vl~~ 222 (988)
+++-|.| .|-+|.++|+.|++.|++|++.+|+++..+++.+. +.+.-. ...+.++ =+.++.+++.++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~~Dv~~~~~v~~~~-- 82 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQE-------LEALGANGGAIRYEPTDITNEDETARAV-- 82 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHTTCCSSCEEEEEECCTTSHHHHHHHH--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------HHHhCCCCceEEEEeCCCCCHHHHHHHH--
Confidence 4566665 68999999999999999999999999887665432 000000 0122222 244555566655
Q ss_pred ccchhhhCCCCCEEEecCCC
Q 001973 223 DLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 223 ~~~i~~~l~~g~ivId~st~ 242 (988)
+.+.....+=+++|++...
T Consensus 83 -~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 83 -DAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp -HHHHHHHSCCCEEEECCCC
T ss_pred -HHHHHHcCCCCEEEECCCc
Confidence 3444433344677776553
No 485
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=92.20 E-value=0.42 Score=55.36 Aligned_cols=64 Identities=25% Similarity=0.490 Sum_probs=49.7
Q ss_pred CCeEEEEccchHHHH-HHHHHHhCCCeEEEEeCChh-HHHHHHhcCCccc--CCHHHHhccCcEEEEEc
Q 001973 146 VTRVGFIGLGAMGFG-MATHLLRSNFTVIGYDVYRP-TLTKFQNVGGLIA--NSPAEAAKDVGVLVIMV 210 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~-lA~~L~~~G~~V~v~dr~~~-~~~~l~~~G~~~~--~s~~e~~~~aDvV~l~v 210 (988)
.++|.|||+|..|.+ +|+.|.+.|++|+++|.... ..+.|.+.|+.+. .+. +.++++|+|+..-
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~-~~~~~a~~vv~s~ 85 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE-EHIEGASVVVVSS 85 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG-GGGTTCSEEEECT
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCH-HHcCCCCEEEECC
Confidence 468999999999997 99999999999999997653 3456777787653 233 3456889888863
No 486
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=92.19 E-value=0.2 Score=55.39 Aligned_cols=43 Identities=16% Similarity=0.231 Sum_probs=37.0
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhC-CC-eEEEEeCChhHHHHHHh
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRS-NF-TVIGYDVYRPTLTKFQN 187 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~-G~-~V~v~dr~~~~~~~l~~ 187 (988)
+.++|.|.| .|.+|..++..|++. |+ +|++++|++.+.+.+.+
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~ 65 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM 65 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH
Confidence 347899998 599999999999999 97 99999999887766543
No 487
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.12 E-value=0.35 Score=51.06 Aligned_cols=84 Identities=12% Similarity=0.120 Sum_probs=54.9
Q ss_pred eEEEE--ccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 148 RVGFI--GLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 148 kIgiI--G~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
|+.+| |.+-+|.++|+.|++.|.+|.++||++++.+++.++ +.+.-.++..+-.=+.++.+++.++ +.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~-------i~~~g~~~~~~~~Dvt~~~~v~~~~---~~ 77 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQE-------LRGMGKEVLGVKADVSKKKDVEEFV---RR 77 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------HHHTTCCEEEEECCTTSHHHHHHHH---HH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH-------HHhcCCcEEEEEccCCCHHHHHHHH---HH
Confidence 67777 567899999999999999999999999887765542 1111111122222245666677766 45
Q ss_pred hhhhCCCCCEEEecCC
Q 001973 226 AVSALSSGASIILSST 241 (988)
Q Consensus 226 i~~~l~~g~ivId~st 241 (988)
+.+...+=+++|+...
T Consensus 78 ~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 78 TFETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCc
Confidence 5555545567777654
No 488
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.12 E-value=0.53 Score=55.82 Aligned_cols=64 Identities=6% Similarity=0.025 Sum_probs=50.7
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhc-CCcc----cCCHHHH----hccCcEEEEE
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNV-GGLI----ANSPAEA----AKDVGVLVIM 209 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-G~~~----~~s~~e~----~~~aDvV~l~ 209 (988)
.++|-|+|.|.+|..++..|.+.|++|++.|.++++++.+.+. |..+ .++.+.. ++++|.++++
T Consensus 127 ~~hviI~G~g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t 199 (565)
T 4gx0_A 127 RGHILIFGIDPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIAN 199 (565)
T ss_dssp CSCEEEESCCHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred CCeEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEe
Confidence 3589999999999999999999999999999999999999887 6543 1222211 4577877763
No 489
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.06 E-value=0.14 Score=56.85 Aligned_cols=36 Identities=28% Similarity=0.315 Sum_probs=32.4
Q ss_pred CCCCeEEEEccchHHHHHHHHHHhCCCeEEEEeCCh
Q 001973 144 NSVTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYR 179 (988)
Q Consensus 144 ~~~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 179 (988)
+++.+|.|||.|.+|.++|..|++.|++|+++|+..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 345689999999999999999999999999999863
No 490
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.05 E-value=0.44 Score=50.37 Aligned_cols=83 Identities=12% Similarity=0.079 Sum_probs=53.2
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.+++-|.| .|.+|..+++.|++.|++|++.+|++++.+++.+. .. ..+.++..=+.+..+++.++ +
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~---------~~~~~~~~D~~~~~~v~~~~---~ 72 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA-LE---------AEAIAVVADVSDPKAVEAVF---A 72 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-CC---------SSEEEEECCTTSHHHHHHHH---H
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hc---------CceEEEEcCCCCHHHHHHHH---H
Confidence 35666665 58999999999999999999999999887766542 10 11122222244555566655 3
Q ss_pred chhhhCCCCCEEEecCC
Q 001973 225 GAVSALSSGASIILSST 241 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st 241 (988)
.+.+...+=+++|++..
T Consensus 73 ~~~~~~g~iD~lvnnAg 89 (263)
T 2a4k_A 73 EALEEFGRLHGVAHFAG 89 (263)
T ss_dssp HHHHHHSCCCEEEEGGG
T ss_pred HHHHHcCCCcEEEECCC
Confidence 44444444467777654
No 491
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.04 E-value=0.39 Score=52.87 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=41.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGL 191 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~ 191 (988)
..+|.|+|+|.+|...+..+...|.+|++.++++++.+.+++.|+.
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~ 212 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAE 212 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC
Confidence 3589999999999999999999999999999999999988887764
No 492
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=91.99 E-value=0.17 Score=54.91 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=28.7
Q ss_pred CeEEEEcc-chHHHHHHHHHHhCCCeEEEEeCChhH
Q 001973 147 TRVGFIGL-GAMGFGMATHLLRSNFTVIGYDVYRPT 181 (988)
Q Consensus 147 ~kIgiIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~ 181 (988)
|+|.|.|. |.+|..++..|++.||+|++.+|+++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR 38 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC
Confidence 58999997 999999999999999999999987654
No 493
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=91.97 E-value=0.43 Score=49.21 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=52.8
Q ss_pred eEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccch
Q 001973 148 RVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLGA 226 (988)
Q Consensus 148 kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~i 226 (988)
+|-|.| .|.+|.++|+.|++.|++|++.+|++++.+++.+.- -....++..=+.+...++.++ +.+
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~---~~~ 69 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----------SNNVGYRARDLASHQEVEQLF---EQL 69 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----------SSCCCEEECCTTCHHHHHHHH---HSC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------hhccCeEeecCCCHHHHHHHH---HHH
Confidence 566666 578999999999999999999999999888776531 112334444455666666665 232
Q ss_pred hhhCCCCCEEEecCCC
Q 001973 227 VSALSSGASIILSSTV 242 (988)
Q Consensus 227 ~~~l~~g~ivId~st~ 242 (988)
.. ...++|++...
T Consensus 70 ~~---~~d~lv~~Ag~ 82 (230)
T 3guy_A 70 DS---IPSTVVHSAGS 82 (230)
T ss_dssp SS---CCSEEEECCCC
T ss_pred hh---cCCEEEEeCCc
Confidence 22 12677776653
No 494
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=91.96 E-value=0.71 Score=49.63 Aligned_cols=88 Identities=11% Similarity=0.018 Sum_probs=54.7
Q ss_pred CCCeEEEEcc-ch--HHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 145 SVTRVGFIGL-GA--MGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 145 ~~~kIgiIG~-G~--mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
+.+++-|.|. |. +|.++|+.|++.|++|.+.+|+.+..+.+.+. .+......++-.=+.+..+++.++
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~- 100 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPL--------AEELGAFVAGHCDVADAASIDAVF- 100 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHH--------HHHHTCEEEEECCTTCHHHHHHHH-
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH--------HHhcCCceEEECCCCCHHHHHHHH-
Confidence 3457777887 45 99999999999999999999996543333221 111111122222245566677666
Q ss_pred cccchhhhCCCCCEEEecCCCC
Q 001973 222 GDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~ 243 (988)
+.+.....+=+++|++....
T Consensus 101 --~~~~~~~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 101 --ETLEKKWGKLDFLVHAIGFS 120 (293)
T ss_dssp --HHHHHHTSCCSEEEECCCCC
T ss_pred --HHHHHhcCCCCEEEECCccC
Confidence 45555554557788877654
No 495
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=91.96 E-value=0.37 Score=51.59 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=53.1
Q ss_pred CCCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEE--EcCChHHHHHHHc
Q 001973 145 SVTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVI--MVTNEAQAESVLY 221 (988)
Q Consensus 145 ~~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l--~vp~~~~~~~vl~ 221 (988)
+.+++-|.| .|-+|.++|+.|++.|++|.+.+|+.+..+++.+.= .+ ...++.++ =+.++.+++.++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-------~~--~~~~~~~~~~Dv~d~~~v~~~~- 96 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEI-------VG--AGGQAIALEADVSDELQMRNAV- 96 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-------TT--TTCCEEEEECCTTCHHHHHHHH-
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-------Hh--cCCcEEEEEccCCCHHHHHHHH-
Confidence 334556665 578999999999999999999999998877665420 00 01222222 244555566655
Q ss_pred cccchhhhCCCCCEEEecCCC
Q 001973 222 GDLGAVSALSSGASIILSSTV 242 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~ 242 (988)
+.+.....+=+++|++...
T Consensus 97 --~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 97 --RDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp --HHHHHHHSCCCEEEECCCC
T ss_pred --HHHHHHhCCCCEEEECCCC
Confidence 3444433344566665543
No 496
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=91.93 E-value=0.11 Score=59.19 Aligned_cols=89 Identities=21% Similarity=0.261 Sum_probs=62.6
Q ss_pred CCeEEEEccchHHHHHHHHHHhCCC---eEEEEe----CC----hh-HHHHHHh-------c-CCc-ccCCHHHHhccCc
Q 001973 146 VTRVGFIGLGAMGFGMATHLLRSNF---TVIGYD----VY----RP-TLTKFQN-------V-GGL-IANSPAEAAKDVG 204 (988)
Q Consensus 146 ~~kIgiIG~G~mG~~lA~~L~~~G~---~V~v~d----r~----~~-~~~~l~~-------~-G~~-~~~s~~e~~~~aD 204 (988)
..||.|+|+|.+|.+++..|.+.|. +|+++| |+ .. ..+.+.. . +.. ...++.++++++|
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~~~~~~L~e~l~~aD 265 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGENIEGGPQEALKDAD 265 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTTCCCSSHHHHHTTCS
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccccccccHHHHhccCC
Confidence 4589999999999999999999997 799999 87 32 2111221 1 111 2456889999999
Q ss_pred EEEEEcCC--hHHHHHHHccccchhhhCCCCCEEEecCC
Q 001973 205 VLVIMVTN--EAQAESVLYGDLGAVSALSSGASIILSST 241 (988)
Q Consensus 205 vV~l~vp~--~~~~~~vl~~~~~i~~~l~~g~ivId~st 241 (988)
++|-++|. ....+. ....+.++.+|+|+++
T Consensus 266 VlInaT~~~~G~~~~e-------~v~~m~~~~iVfDLyn 297 (439)
T 2dvm_A 266 VLISFTRPGPGVIKPQ-------WIEKMNEDAIVFPLAN 297 (439)
T ss_dssp EEEECSCCCSSSSCHH-------HHTTSCTTCEEEECCS
T ss_pred EEEEcCCCccCCCChH-------HHHhcCCCCEEEECCC
Confidence 99999987 221122 2234567889999954
No 497
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=91.91 E-value=0.6 Score=48.41 Aligned_cols=83 Identities=11% Similarity=0.042 Sum_probs=54.2
Q ss_pred CeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHccccc
Q 001973 147 TRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDLG 225 (988)
Q Consensus 147 ~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~~ 225 (988)
+++-|.| .|-+|.++|+.|++.|++|.+.+|++++.+++.+.- -..+.++..=+.+..+++.++ +.
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~v~~~~---~~ 70 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL----------GNAVIGIVADLAHHEDVDVAF---AA 70 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----------GGGEEEEECCTTSHHHHHHHH---HH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------cCCceEEECCCCCHHHHHHHH---HH
Confidence 4677776 478999999999999999999999998877665420 011222222344556666665 34
Q ss_pred hhhhCCCCCEEEecCCC
Q 001973 226 AVSALSSGASIILSSTV 242 (988)
Q Consensus 226 i~~~l~~g~ivId~st~ 242 (988)
+.+...+=+++|++...
T Consensus 71 ~~~~~g~id~lvnnAg~ 87 (235)
T 3l6e_A 71 AVEWGGLPELVLHCAGT 87 (235)
T ss_dssp HHHHHCSCSEEEEECCC
T ss_pred HHHhcCCCcEEEECCCC
Confidence 44444444677776654
No 498
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=91.89 E-value=0.72 Score=48.53 Aligned_cols=83 Identities=16% Similarity=0.039 Sum_probs=52.8
Q ss_pred CCeEEEEc-cchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHcccc
Q 001973 146 VTRVGFIG-LGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLYGDL 224 (988)
Q Consensus 146 ~~kIgiIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~~~~ 224 (988)
.++|-|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+. .. ....++-.=+.++..++.++ +
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~---------~~~~~~~~D~~d~~~v~~~~---~ 78 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG-LE---------NGGFAVEVDVTKRASVDAAM---Q 78 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-CT---------TCCEEEECCTTCHHHHHHHH---H
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-Hh---------cCCeEEEEeCCCHHHHHHHH---H
Confidence 35676665 57899999999999999999999999887765442 10 02222222344555566555 3
Q ss_pred chhhhCCCCCEEEecCC
Q 001973 225 GAVSALSSGASIILSST 241 (988)
Q Consensus 225 ~i~~~l~~g~ivId~st 241 (988)
.+.+...+=+++|++..
T Consensus 79 ~~~~~~g~iD~lv~~Ag 95 (263)
T 3ak4_A 79 KAIDALGGFDLLCANAG 95 (263)
T ss_dssp HHHHHHTCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 33333333467777654
No 499
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.85 E-value=0.46 Score=50.70 Aligned_cols=41 Identities=12% Similarity=0.179 Sum_probs=35.3
Q ss_pred CeEEEE--ccchHHHHHHHHHHhCCCeEEEEeCChhHHHHHHh
Q 001973 147 TRVGFI--GLGAMGFGMATHLLRSNFTVIGYDVYRPTLTKFQN 187 (988)
Q Consensus 147 ~kIgiI--G~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~ 187 (988)
-|+++| |.+-+|.++|+.|++.|.+|.+.+|+.+++++..+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~ 71 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA 71 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 378887 56679999999999999999999999998876654
No 500
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=91.82 E-value=0.72 Score=49.65 Aligned_cols=88 Identities=11% Similarity=0.077 Sum_probs=56.0
Q ss_pred CCCeEEEEccc---hHHHHHHHHHHhCCCeEEEEeCChhHHHHHHhcCCcccCCHHHHhccCcEEEEEcCChHHHHHHHc
Q 001973 145 SVTRVGFIGLG---AMGFGMATHLLRSNFTVIGYDVYRPTLTKFQNVGGLIANSPAEAAKDVGVLVIMVTNEAQAESVLY 221 (988)
Q Consensus 145 ~~~kIgiIG~G---~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~aDvV~l~vp~~~~~~~vl~ 221 (988)
+.+++-|.|.+ -+|.++|+.|++.|++|.+.+|+.+..+.+.+. .+......++-.=+.+..+++.++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~- 99 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPL--------AESLGVKLTVPCDVSDAESVDNMF- 99 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHH--------HHHHTCCEEEECCTTCHHHHHHHH-
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH--------HHhcCCeEEEEcCCCCHHHHHHHH-
Confidence 34578888985 899999999999999999999997654443321 011112222223345666677666
Q ss_pred cccchhhhCCCCCEEEecCCCC
Q 001973 222 GDLGAVSALSSGASIILSSTVS 243 (988)
Q Consensus 222 ~~~~i~~~l~~g~ivId~st~~ 243 (988)
+.+.+...+=+++|++....
T Consensus 100 --~~~~~~~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 100 --KVLAEEWGSLDFVVHAVAFS 119 (296)
T ss_dssp --HHHHHHHSCCSEEEECCCCC
T ss_pred --HHHHHHcCCCCEEEECCCcC
Confidence 44444444457788776654
Done!