Query 001974
Match_columns 988
No_of_seqs 962 out of 6291
Neff 9.7
Searched_HMMs 46136
Date Thu Mar 28 13:38:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001974.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001974hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 9E-114 2E-118 1091.6 63.8 903 4-975 42-955 (968)
2 PLN00113 leucine-rich repeat r 100.0 4.4E-61 9.5E-66 610.0 34.5 516 32-559 93-610 (968)
3 KOG1187 Serine/threonine prote 100.0 1.4E-47 3E-52 419.8 25.2 289 649-973 61-354 (361)
4 KOG0581 Mitogen-activated prot 100.0 7.1E-46 1.5E-50 379.1 18.6 253 664-967 80-335 (364)
5 KOG0192 Tyrosine kinase specif 100.0 3.9E-45 8.4E-50 396.5 23.6 262 665-979 43-311 (362)
6 KOG0197 Tyrosine kinases [Sign 100.0 8.1E-45 1.8E-49 389.7 18.0 258 663-974 206-464 (468)
7 KOG0575 Polo-like serine/threo 100.0 5.1E-44 1.1E-48 386.5 21.7 249 663-967 18-269 (592)
8 KOG0595 Serine/threonine-prote 100.0 3.1E-44 6.6E-49 369.6 17.6 201 661-885 8-216 (429)
9 KOG0615 Serine/threonine prote 100.0 1.2E-44 2.5E-49 371.5 13.5 254 662-967 171-437 (475)
10 KOG0591 NIMA (never in mitosis 100.0 4.8E-45 1E-49 355.3 6.6 261 663-970 19-284 (375)
11 KOG0472 Leucine-rich repeat pr 100.0 2E-47 4.4E-52 388.7 -14.0 475 33-534 46-541 (565)
12 KOG1026 Nerve growth factor re 100.0 3.4E-43 7.4E-48 395.4 15.5 270 662-974 485-765 (774)
13 KOG0598 Ribosomal protein S6 k 100.0 7.5E-43 1.6E-47 357.0 16.4 243 661-959 23-269 (357)
14 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-43 2.8E-48 388.9 11.5 259 664-973 630-893 (996)
15 KOG0593 Predicted protein kina 100.0 4E-43 8.7E-48 345.5 12.8 270 663-966 2-283 (396)
16 KOG0592 3-phosphoinositide-dep 100.0 2.8E-42 6.1E-47 366.0 17.8 257 659-967 69-338 (604)
17 KOG0193 Serine/threonine prote 100.0 8.2E-43 1.8E-47 374.5 13.9 270 654-975 383-657 (678)
18 KOG0472 Leucine-rich repeat pr 100.0 3.7E-46 8E-51 379.5 -12.0 459 32-510 68-541 (565)
19 KOG0661 MAPK related serine/th 100.0 1.4E-42 2.9E-47 362.6 9.3 270 662-967 9-291 (538)
20 KOG0198 MEKK and related serin 100.0 1.5E-41 3.3E-46 356.1 16.8 262 663-971 17-280 (313)
21 KOG4194 Membrane glycoprotein 100.0 9.9E-43 2.1E-47 369.7 7.4 392 33-434 53-449 (873)
22 KOG4194 Membrane glycoprotein 100.0 8.3E-43 1.8E-47 370.2 6.6 386 15-410 47-449 (873)
23 KOG0659 Cdk activating kinase 100.0 4.4E-41 9.5E-46 326.0 17.6 269 663-967 2-281 (318)
24 KOG0600 Cdc2-related protein k 100.0 1.6E-41 3.4E-46 357.4 15.5 272 662-966 116-399 (560)
25 KOG0582 Ste20-like serine/thre 100.0 1.3E-40 2.9E-45 345.0 18.9 267 661-967 24-293 (516)
26 KOG0578 p21-activated serine/t 100.0 9.3E-41 2E-45 358.4 16.6 252 662-967 272-523 (550)
27 KOG1095 Protein tyrosine kinas 100.0 2E-40 4.4E-45 387.2 18.7 269 663-977 692-967 (1025)
28 KOG4721 Serine/threonine prote 100.0 2.7E-41 5.9E-46 357.1 10.4 244 666-973 127-370 (904)
29 KOG0597 Serine-threonine prote 100.0 1E-40 2.2E-45 353.3 13.8 248 663-967 2-251 (808)
30 KOG0583 Serine/threonine prote 100.0 1.6E-39 3.6E-44 356.8 21.5 255 660-972 14-279 (370)
31 KOG0616 cAMP-dependent protein 100.0 7.1E-40 1.5E-44 322.3 16.4 238 662-958 43-283 (355)
32 KOG0588 Serine/threonine prote 100.0 6.1E-40 1.3E-44 355.1 17.4 249 663-968 12-264 (786)
33 KOG0660 Mitogen-activated prot 100.0 2.3E-40 5E-45 337.2 12.8 289 658-967 17-310 (359)
34 KOG2345 Serine/threonine prote 100.0 1.7E-40 3.7E-45 318.6 10.2 275 660-971 18-300 (302)
35 KOG0605 NDR and related serine 100.0 3E-39 6.5E-44 343.8 19.1 258 660-966 138-444 (550)
36 KOG0201 Serine/threonine prote 100.0 1.5E-40 3.3E-45 344.9 8.9 251 662-967 12-263 (467)
37 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.9E-39 8.4E-44 359.6 20.9 273 661-973 5-336 (338)
38 KOG0663 Protein kinase PITSLRE 100.0 1.8E-39 3.8E-44 324.2 15.4 272 662-967 75-361 (419)
39 KOG1094 Discoidin domain recep 100.0 1.7E-39 3.6E-44 345.4 16.1 265 662-971 537-804 (807)
40 KOG0585 Ca2+/calmodulin-depend 100.0 4.9E-39 1.1E-43 335.3 18.4 261 660-968 94-373 (576)
41 KOG0194 Protein tyrosine kinas 100.0 2.2E-39 4.7E-44 354.6 15.8 268 657-977 151-426 (474)
42 KOG3653 Transforming growth fa 100.0 5.9E-39 1.3E-43 335.2 16.7 277 663-975 210-507 (534)
43 PHA02988 hypothetical protein; 100.0 4.3E-38 9.4E-43 340.9 24.1 251 669-973 26-281 (283)
44 KOG0580 Serine/threonine prote 100.0 3.8E-39 8.1E-44 308.2 12.9 251 661-967 20-273 (281)
45 KOG4257 Focal adhesion tyrosin 100.0 1.1E-38 2.4E-43 340.8 17.0 256 665-974 391-652 (974)
46 KOG4278 Protein tyrosine kinas 100.0 5E-39 1.1E-43 342.4 13.9 264 656-972 260-524 (1157)
47 cd05631 STKc_GRK4 Catalytic do 100.0 4.6E-38 9.9E-43 341.8 21.2 253 664-967 1-261 (285)
48 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.1E-38 8.8E-43 351.9 20.0 286 664-967 1-290 (338)
49 KOG0658 Glycogen synthase kina 100.0 6.2E-39 1.4E-43 327.3 12.0 282 664-973 25-314 (364)
50 cd05612 STKc_PRKX_like Catalyt 100.0 3.3E-38 7.1E-43 343.9 18.6 246 663-967 1-254 (291)
51 KOG2052 Activin A type IB rece 100.0 1.3E-37 2.9E-42 322.6 20.9 273 662-973 210-505 (513)
52 KOG0694 Serine/threonine prote 100.0 4.8E-38 1E-42 344.0 18.5 244 661-961 366-613 (694)
53 KOG0618 Serine/threonine phosp 100.0 5E-41 1.1E-45 376.2 -5.0 482 37-555 3-487 (1081)
54 KOG0589 Serine/threonine prote 100.0 1.7E-38 3.7E-43 340.6 14.6 252 663-967 4-258 (426)
55 KOG1989 ARK protein kinase fam 100.0 3.2E-38 7E-43 357.6 16.6 268 662-974 36-314 (738)
56 KOG0611 Predicted serine/threo 100.0 1.9E-38 4.1E-43 322.8 13.0 248 663-968 53-304 (668)
57 PTZ00263 protein kinase A cata 100.0 6.2E-38 1.3E-42 347.6 18.3 247 662-967 17-271 (329)
58 KOG0594 Protein kinase PCTAIRE 100.0 6.6E-38 1.4E-42 321.3 16.9 281 663-971 11-308 (323)
59 KOG0618 Serine/threonine phosp 100.0 8.5E-41 1.8E-45 374.3 -4.9 484 60-580 2-489 (1081)
60 cd05571 STKc_PKB Catalytic dom 100.0 1E-37 2.2E-42 345.2 19.2 242 669-966 1-250 (323)
61 cd07862 STKc_CDK6 Catalytic do 100.0 3.5E-37 7.6E-42 336.3 22.0 273 663-966 1-286 (290)
62 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.8E-37 6.1E-42 332.2 20.7 257 662-971 4-265 (266)
63 cd05096 PTKc_DDR1 Catalytic do 100.0 3.6E-37 7.9E-42 338.4 21.7 273 662-969 4-303 (304)
64 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-37 4.4E-42 340.1 19.4 279 662-966 4-287 (303)
65 cd06649 PKc_MEK2 Catalytic dom 100.0 4.1E-37 8.8E-42 341.6 21.6 281 662-968 4-302 (331)
66 KOG0033 Ca2+/calmodulin-depend 100.0 3E-39 6.5E-44 308.3 3.8 252 662-966 10-266 (355)
67 cd05106 PTKc_CSF-1R Catalytic 100.0 2.6E-37 5.6E-42 347.7 20.0 272 660-972 35-373 (374)
68 cd07848 STKc_CDKL5 Catalytic d 100.0 2.6E-37 5.6E-42 336.8 19.4 276 663-966 1-283 (287)
69 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.8E-37 8.3E-42 335.1 20.5 278 662-966 4-284 (288)
70 cd05104 PTKc_Kit Catalytic dom 100.0 5.6E-37 1.2E-41 345.5 21.9 269 662-971 34-374 (375)
71 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.4E-37 5.2E-42 344.1 18.5 254 663-967 1-257 (333)
72 cd05595 STKc_PKB_beta Catalyti 100.0 4.8E-37 1E-41 339.5 20.4 242 669-966 1-250 (323)
73 PTZ00426 cAMP-dependent protei 100.0 2.4E-37 5.2E-42 343.2 17.8 247 662-967 29-284 (340)
74 cd05585 STKc_YPK1_like Catalyt 100.0 3.5E-37 7.7E-42 339.2 18.8 240 671-966 1-246 (312)
75 PLN00034 mitogen-activated pro 100.0 6.1E-37 1.3E-41 343.4 21.1 249 663-967 74-328 (353)
76 KOG0444 Cytoskeletal regulator 100.0 1.4E-39 3E-44 347.2 -1.0 387 54-553 5-395 (1255)
77 cd05593 STKc_PKB_gamma Catalyt 100.0 6.5E-37 1.4E-41 339.0 20.2 243 669-967 1-251 (328)
78 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-36 2.7E-41 335.8 22.4 260 662-974 6-271 (316)
79 KOG4279 Serine/threonine prote 100.0 5E-38 1.1E-42 339.0 10.6 247 669-967 581-832 (1226)
80 PHA03212 serine/threonine kina 100.0 1.2E-36 2.6E-41 343.2 22.4 194 662-884 91-284 (391)
81 cd05052 PTKc_Abl Catalytic dom 100.0 1.6E-36 3.5E-41 325.9 21.8 256 663-971 6-262 (263)
82 PF07714 Pkinase_Tyr: Protein 100.0 4.5E-37 9.7E-42 328.8 16.9 251 667-968 3-259 (259)
83 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-36 3E-41 330.2 20.8 253 664-967 1-261 (285)
84 KOG0599 Phosphorylase kinase g 100.0 2.2E-37 4.7E-42 300.0 12.5 253 662-967 16-283 (411)
85 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.2E-36 4.8E-41 323.5 21.5 251 663-968 4-255 (256)
86 cd05054 PTKc_VEGFR Catalytic d 100.0 1.9E-36 4.1E-41 336.2 21.1 273 661-973 5-335 (337)
87 cd05589 STKc_PKN Catalytic dom 100.0 1.9E-36 4.2E-41 335.3 20.6 245 665-966 1-256 (324)
88 cd06650 PKc_MEK1 Catalytic dom 100.0 2.8E-36 6E-41 334.7 21.8 200 662-885 4-204 (333)
89 cd05048 PTKc_Ror Catalytic Dom 100.0 2.5E-36 5.4E-41 328.4 20.9 266 663-970 5-282 (283)
90 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.4E-36 3E-41 326.2 18.5 258 660-971 3-261 (261)
91 PRK13184 pknD serine/threonine 100.0 1.7E-36 3.6E-41 358.0 20.8 274 663-974 2-293 (932)
92 cd05033 PTKc_EphR Catalytic do 100.0 5.5E-36 1.2E-40 322.4 23.1 258 662-971 3-265 (266)
93 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-36 3.4E-41 343.4 19.8 256 664-967 2-305 (381)
94 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.4E-36 5.2E-41 328.6 20.3 275 663-971 4-283 (284)
95 PTZ00267 NIMA-related protein 100.0 1.9E-36 4.2E-41 351.3 20.7 254 664-966 68-322 (478)
96 cd05594 STKc_PKB_alpha Catalyt 100.0 9.9E-37 2.1E-41 337.7 17.4 243 669-967 1-252 (325)
97 cd05587 STKc_cPKC Catalytic do 100.0 2.5E-36 5.4E-41 334.4 20.5 242 664-961 1-246 (324)
98 cd05599 STKc_NDR_like Catalyti 100.0 9.6E-37 2.1E-41 343.9 17.5 256 663-967 1-296 (364)
99 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-36 4.6E-41 340.2 20.0 204 663-885 1-238 (363)
100 PTZ00283 serine/threonine prot 100.0 2.2E-36 4.7E-41 350.5 20.6 265 659-967 28-297 (496)
101 cd05590 STKc_nPKC_eta Catalyti 100.0 2E-36 4.3E-41 334.1 19.4 238 669-962 1-242 (320)
102 KOG0574 STE20-like serine/thre 100.0 5.3E-39 1.2E-43 314.8 -1.1 249 665-967 35-283 (502)
103 cd05592 STKc_nPKC_theta_delta 100.0 2.7E-36 5.8E-41 332.4 20.3 242 669-966 1-247 (316)
104 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.5E-36 7.6E-41 327.1 20.8 271 665-972 6-282 (283)
105 cd05093 PTKc_TrkB Catalytic do 100.0 5.8E-36 1.3E-40 326.1 22.5 270 663-974 5-282 (288)
106 cd05573 STKc_ROCK_NDR_like Cat 100.0 8.9E-37 1.9E-41 342.7 16.3 256 663-967 1-285 (350)
107 cd05111 PTK_HER3 Pseudokinase 100.0 8.7E-36 1.9E-40 322.9 23.4 259 663-974 7-271 (279)
108 cd05584 STKc_p70S6K Catalytic 100.0 3.3E-36 7.1E-41 333.1 20.5 243 668-966 1-255 (323)
109 cd05614 STKc_MSK2_N N-terminal 100.0 2.5E-36 5.3E-41 336.0 19.5 253 664-967 1-267 (332)
110 cd05049 PTKc_Trk Catalytic dom 100.0 3.6E-36 7.8E-41 326.7 20.3 266 662-969 4-279 (280)
111 cd05072 PTKc_Lyn Catalytic dom 100.0 2.9E-36 6.3E-41 323.7 19.4 256 661-970 4-260 (261)
112 cd05591 STKc_nPKC_epsilon Cata 100.0 2.4E-36 5.1E-41 334.1 19.2 243 669-967 1-254 (321)
113 KOG0610 Putative serine/threon 100.0 2E-36 4.3E-41 311.8 17.1 256 663-966 77-391 (459)
114 cd07863 STKc_CDK4 Catalytic do 100.0 4.2E-36 9.1E-41 327.6 20.9 279 664-966 1-284 (288)
115 cd05608 STKc_GRK1 Catalytic do 100.0 4.1E-36 8.9E-41 325.5 20.6 249 671-967 1-257 (280)
116 cd05105 PTKc_PDGFR_alpha Catal 100.0 5.2E-36 1.1E-40 337.9 22.2 272 660-972 34-398 (400)
117 cd08228 STKc_Nek6 Catalytic do 100.0 4.7E-36 1E-40 323.3 20.8 262 663-972 2-266 (267)
118 cd05618 STKc_aPKC_iota Catalyt 100.0 3.3E-36 7.1E-41 333.6 20.0 243 669-961 1-250 (329)
119 cd05588 STKc_aPKC Catalytic do 100.0 3.9E-36 8.6E-41 333.1 20.3 248 669-966 1-261 (329)
120 cd05089 PTKc_Tie1 Catalytic do 100.0 9E-36 1.9E-40 326.0 22.7 272 663-979 2-283 (297)
121 KOG0199 ACK and related non-re 100.0 6.4E-37 1.4E-41 331.5 13.1 254 665-969 112-370 (1039)
122 cd05619 STKc_nPKC_theta Cataly 100.0 5.1E-36 1.1E-40 330.0 20.7 242 669-966 1-247 (316)
123 cd05616 STKc_cPKC_beta Catalyt 100.0 3.8E-36 8.3E-41 332.7 19.7 242 664-961 1-246 (323)
124 cd05068 PTKc_Frk_like Catalyti 100.0 9.6E-36 2.1E-40 319.6 22.1 256 661-970 4-260 (261)
125 KOG4717 Serine/threonine prote 100.0 1.6E-36 3.6E-41 317.3 15.5 248 663-966 18-269 (864)
126 KOG1025 Epidermal growth facto 100.0 1.8E-36 3.9E-41 333.6 16.6 256 666-974 699-960 (1177)
127 cd05620 STKc_nPKC_delta Cataly 100.0 4.5E-36 9.7E-41 330.7 19.9 241 669-965 1-246 (316)
128 cd05607 STKc_GRK7 Catalytic do 100.0 7.5E-36 1.6E-40 322.9 21.0 247 671-967 1-250 (277)
129 cd07876 STKc_JNK2 Catalytic do 100.0 7.4E-36 1.6E-40 335.7 21.7 203 661-885 19-224 (359)
130 cd05629 STKc_NDR_like_fungal C 100.0 2.5E-36 5.4E-41 341.7 18.0 256 663-967 1-305 (377)
131 cd05601 STKc_CRIK Catalytic do 100.0 1.1E-36 2.3E-41 338.6 14.7 253 663-966 1-262 (330)
132 cd05570 STKc_PKC Catalytic dom 100.0 4.5E-36 9.7E-41 331.2 19.5 242 669-966 1-251 (318)
133 cd05596 STKc_ROCK Catalytic do 100.0 2.2E-36 4.7E-41 340.0 17.2 255 661-967 41-304 (370)
134 cd05053 PTKc_FGFR Catalytic do 100.0 6.6E-36 1.4E-40 326.8 20.5 272 659-972 8-292 (293)
135 cd05598 STKc_LATS Catalytic do 100.0 1.7E-36 3.7E-41 343.1 16.3 256 663-967 1-301 (376)
136 cd05035 PTKc_Axl_like Catalyti 100.0 1.9E-35 4E-40 319.8 23.6 265 665-971 1-272 (273)
137 cd05062 PTKc_IGF-1R Catalytic 100.0 5.7E-36 1.2E-40 324.3 19.5 266 661-969 4-276 (277)
138 cd05084 PTKc_Fes Catalytic dom 100.0 1.2E-35 2.5E-40 317.1 21.5 249 669-969 1-251 (252)
139 KOG0577 Serine/threonine prote 100.0 8.5E-37 1.8E-41 324.4 12.3 244 665-966 28-277 (948)
140 cd06646 STKc_MAP4K5 Catalytic 100.0 4.6E-36 9.9E-41 323.3 18.3 256 662-968 8-266 (267)
141 cd05075 PTKc_Axl Catalytic dom 100.0 1.9E-35 4.1E-40 319.5 23.2 265 665-971 1-271 (272)
142 cd05109 PTKc_HER2 Catalytic do 100.0 1.3E-35 2.9E-40 321.8 21.8 260 662-974 6-271 (279)
143 cd05625 STKc_LATS1 Catalytic d 100.0 3.4E-36 7.5E-41 341.2 17.8 203 664-885 2-250 (382)
144 cd05116 PTKc_Syk Catalytic dom 100.0 1.7E-35 3.8E-40 316.7 22.2 249 670-971 2-255 (257)
145 cd05094 PTKc_TrkC Catalytic do 100.0 1.4E-35 3E-40 323.6 21.9 270 663-974 5-285 (291)
146 cd05621 STKc_ROCK2 Catalytic d 100.0 4.2E-36 9E-41 337.1 18.0 257 659-967 39-304 (370)
147 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-35 2.9E-40 317.5 21.1 250 663-971 6-256 (256)
148 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.7E-35 3.6E-40 319.1 21.9 259 662-971 4-267 (268)
149 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-35 2.4E-40 333.9 21.1 204 660-885 14-220 (355)
150 cd05115 PTKc_Zap-70 Catalytic 100.0 2.1E-35 4.6E-40 315.7 22.3 250 670-971 2-255 (257)
151 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-35 2.5E-40 317.7 20.1 252 663-969 4-256 (256)
152 cd05088 PTKc_Tie2 Catalytic do 100.0 1.3E-35 2.8E-40 325.4 20.9 271 662-977 6-286 (303)
153 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.9E-35 4.2E-40 317.0 21.7 254 662-970 5-259 (260)
154 PTZ00036 glycogen synthase kin 100.0 7.3E-36 1.6E-40 342.3 19.5 285 661-972 64-358 (440)
155 cd05059 PTKc_Tec_like Catalyti 100.0 1.6E-35 3.5E-40 316.8 20.9 251 663-968 4-255 (256)
156 cd05575 STKc_SGK Catalytic dom 100.0 5.9E-36 1.3E-40 331.2 18.1 238 669-962 1-242 (323)
157 cd05060 PTKc_Syk_like Catalyti 100.0 2.5E-35 5.5E-40 315.5 22.3 251 669-972 1-256 (257)
158 cd05615 STKc_cPKC_alpha Cataly 100.0 1.1E-35 2.3E-40 328.8 19.9 242 664-961 1-246 (323)
159 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3E-35 6.6E-40 317.0 23.0 262 663-972 2-266 (267)
160 cd06625 STKc_MEKK3_like Cataly 100.0 3.1E-35 6.7E-40 316.2 22.9 254 663-967 2-260 (263)
161 cd05058 PTKc_Met_Ron Catalytic 100.0 2.3E-35 4.9E-40 317.0 21.8 256 669-973 1-261 (262)
162 cd05632 STKc_GRK5 Catalytic do 100.0 1.9E-35 4E-40 321.3 21.4 253 664-967 1-261 (285)
163 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.8E-35 3.9E-40 320.3 21.2 263 661-969 4-276 (277)
164 cd08219 STKc_Nek3 Catalytic do 100.0 1.3E-35 2.7E-40 317.5 19.6 251 664-967 1-252 (255)
165 cd06654 STKc_PAK1 Catalytic do 100.0 1.5E-35 3.3E-40 323.7 20.7 252 662-967 19-270 (296)
166 cd05582 STKc_RSK_N N-terminal 100.0 2.6E-36 5.7E-41 333.4 14.7 239 669-963 2-245 (318)
167 KOG0667 Dual-specificity tyros 100.0 4.8E-36 1E-40 329.1 16.4 195 664-884 187-389 (586)
168 cd05630 STKc_GRK6 Catalytic do 100.0 1.8E-35 3.8E-40 321.3 20.8 252 664-966 1-260 (285)
169 cd08529 STKc_FA2-like Catalyti 100.0 2.4E-35 5.1E-40 315.7 21.5 251 664-967 1-253 (256)
170 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.3E-35 2.8E-40 326.8 20.0 277 663-966 6-285 (309)
171 cd07853 STKc_NLK Catalytic dom 100.0 1.8E-35 3.8E-40 334.2 21.5 273 664-967 1-288 (372)
172 cd05045 PTKc_RET Catalytic dom 100.0 1.9E-35 4.2E-40 322.4 21.1 268 664-973 1-288 (290)
173 cd05071 PTKc_Src Catalytic dom 100.0 2.8E-35 6.1E-40 315.8 22.0 255 662-971 5-260 (262)
174 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.6E-35 3.4E-40 331.2 20.6 284 659-967 11-298 (343)
175 cd05039 PTKc_Csk_like Catalyti 100.0 3.3E-35 7.1E-40 314.5 22.1 251 662-971 5-256 (256)
176 cd08229 STKc_Nek7 Catalytic do 100.0 1.5E-35 3.3E-40 319.3 19.6 262 663-972 2-266 (267)
177 cd07875 STKc_JNK1 Catalytic do 100.0 1.4E-35 3.1E-40 334.0 20.3 203 661-885 22-227 (364)
178 cd06619 PKc_MKK5 Catalytic dom 100.0 3.5E-35 7.6E-40 318.3 22.5 252 663-967 1-253 (279)
179 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.5E-35 5.4E-40 328.8 21.9 274 661-974 5-342 (343)
180 cd05090 PTKc_Ror1 Catalytic do 100.0 2.5E-35 5.4E-40 320.4 21.4 266 663-970 5-282 (283)
181 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.8E-35 3.9E-40 333.2 20.9 272 660-972 34-400 (401)
182 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.6E-35 3.6E-40 327.9 20.2 244 669-962 1-249 (327)
183 cd05056 PTKc_FAK Catalytic dom 100.0 3.4E-35 7.3E-40 317.1 22.1 259 662-974 5-268 (270)
184 cd05602 STKc_SGK1 Catalytic do 100.0 9E-36 2E-40 330.1 18.0 242 669-966 1-246 (325)
185 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2E-35 4.3E-40 321.3 20.3 274 663-971 4-283 (284)
186 cd05066 PTKc_EphR_A Catalytic 100.0 3E-35 6.5E-40 316.8 21.5 259 662-971 3-266 (267)
187 cd05065 PTKc_EphR_B Catalytic 100.0 2.8E-35 6E-40 317.5 21.2 259 663-971 4-268 (269)
188 cd05095 PTKc_DDR2 Catalytic do 100.0 1.7E-35 3.7E-40 323.7 19.8 273 662-969 4-295 (296)
189 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-35 2.4E-40 334.1 18.4 261 656-968 36-305 (371)
190 cd05092 PTKc_TrkA Catalytic do 100.0 2.7E-35 5.8E-40 319.4 20.5 265 663-969 5-279 (280)
191 cd06615 PKc_MEK Catalytic doma 100.0 3E-35 6.5E-40 323.4 20.9 276 663-968 1-288 (308)
192 cd05604 STKc_SGK3 Catalytic do 100.0 9.6E-36 2.1E-40 329.8 16.9 242 669-966 1-246 (325)
193 cd05043 PTK_Ryk Pseudokinase d 100.0 3.9E-35 8.5E-40 318.4 21.4 270 661-974 4-279 (280)
194 cd06637 STKc_TNIK Catalytic do 100.0 2.5E-35 5.5E-40 318.5 19.7 259 660-966 3-268 (272)
195 KOG0032 Ca2+/calmodulin-depend 100.0 2.8E-35 6.1E-40 322.6 20.0 252 661-966 33-292 (382)
196 PHA03209 serine/threonine kina 100.0 1.1E-35 2.4E-40 333.1 17.1 275 661-967 64-351 (357)
197 cd05067 PTKc_Lck_Blk Catalytic 100.0 4E-35 8.6E-40 314.6 20.6 255 661-970 4-259 (260)
198 cd05055 PTKc_PDGFR Catalytic d 100.0 5.7E-35 1.2E-39 320.0 22.2 260 662-971 34-301 (302)
199 PTZ00266 NIMA-related protein 100.0 1.6E-35 3.5E-40 350.7 19.1 261 659-966 9-294 (1021)
200 cd06655 STKc_PAK2 Catalytic do 100.0 4.4E-35 9.6E-40 319.9 21.2 251 663-967 19-269 (296)
201 cd05627 STKc_NDR2 Catalytic do 100.0 1E-35 2.2E-40 334.4 16.6 204 663-885 1-238 (360)
202 cd05099 PTKc_FGFR4 Catalytic d 100.0 6E-35 1.3E-39 322.1 22.3 277 661-979 10-301 (314)
203 cd05101 PTKc_FGFR2 Catalytic d 100.0 6E-35 1.3E-39 320.8 22.2 272 661-974 13-299 (304)
204 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-35 3.5E-40 327.6 17.8 238 669-962 1-242 (321)
205 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-35 4.5E-40 318.2 17.9 253 663-966 9-264 (267)
206 cd06638 STKc_myosinIIIA Cataly 100.0 2.9E-35 6.3E-40 320.6 19.2 269 654-967 9-283 (286)
207 cd05091 PTKc_Ror2 Catalytic do 100.0 3.4E-35 7.4E-40 319.4 19.7 265 664-970 6-282 (283)
208 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.9E-35 1.1E-39 321.8 21.1 271 662-974 17-302 (307)
209 PTZ00284 protein kinase; Provi 100.0 2.2E-35 4.7E-40 342.8 19.2 202 657-885 123-347 (467)
210 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-35 8.6E-40 319.5 20.1 269 660-971 3-278 (288)
211 cd06643 STKc_SLK Catalytic dom 100.0 5.5E-35 1.2E-39 317.5 21.0 251 665-967 7-262 (282)
212 cd05110 PTKc_HER4 Catalytic do 100.0 7.1E-35 1.5E-39 319.8 22.1 261 662-975 6-272 (303)
213 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.6E-35 7.8E-40 319.6 19.5 274 663-971 4-283 (284)
214 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.1E-35 1.3E-39 313.0 21.0 240 669-968 1-261 (262)
215 cd06644 STKc_STK10_LOK Catalyt 100.0 7.1E-35 1.5E-39 318.3 21.9 253 662-966 11-268 (292)
216 cd06613 STKc_MAP4K3_like Catal 100.0 4.8E-35 1E-39 314.5 20.0 255 662-966 2-259 (262)
217 cd05069 PTKc_Yes Catalytic dom 100.0 7.3E-35 1.6E-39 312.5 21.3 253 663-970 6-259 (260)
218 cd05097 PTKc_DDR_like Catalyti 100.0 3.9E-35 8.5E-40 320.8 19.5 273 662-969 4-294 (295)
219 cd06611 STKc_SLK_like Catalyti 100.0 3.3E-35 7.1E-40 319.0 18.8 254 662-967 4-262 (280)
220 cd05051 PTKc_DDR Catalytic dom 100.0 6.5E-35 1.4E-39 319.5 21.0 273 662-969 4-295 (296)
221 cd05047 PTKc_Tie Catalytic dom 100.0 8.6E-35 1.9E-39 313.7 21.5 259 669-972 1-269 (270)
222 cd05032 PTKc_InsR_like Catalyt 100.0 5.9E-35 1.3E-39 316.6 20.1 265 662-969 5-276 (277)
223 cd06624 STKc_ASK Catalytic dom 100.0 9.6E-35 2.1E-39 313.1 21.6 256 659-966 4-264 (268)
224 cd05597 STKc_DMPK_like Catalyt 100.0 3.4E-35 7.4E-40 325.9 18.6 256 663-967 1-266 (331)
225 cd05057 PTKc_EGFR_like Catalyt 100.0 1.4E-34 3E-39 313.8 22.8 259 663-974 7-271 (279)
226 KOG0444 Cytoskeletal regulator 100.0 5.4E-38 1.2E-42 335.0 -3.9 364 32-460 7-373 (1255)
227 cd06656 STKc_PAK3 Catalytic do 100.0 5E-35 1.1E-39 319.9 19.2 251 662-966 18-268 (297)
228 cd06639 STKc_myosinIIIB Cataly 100.0 7.5E-35 1.6E-39 318.0 20.5 270 653-967 12-287 (291)
229 cd05034 PTKc_Src_like Catalyti 100.0 8.7E-35 1.9E-39 312.3 20.7 256 661-970 4-260 (261)
230 PHA03211 serine/threonine kina 100.0 8.8E-35 1.9E-39 331.1 21.7 278 662-967 168-455 (461)
231 PF00069 Pkinase: Protein kina 100.0 4.1E-35 8.8E-40 314.7 17.9 253 665-966 1-256 (260)
232 cd07868 STKc_CDK8 Catalytic do 100.0 9.2E-35 2E-39 321.5 21.1 207 668-886 6-219 (317)
233 cd00192 PTKc Catalytic domain 100.0 1.5E-34 3.2E-39 310.7 22.0 257 669-969 1-262 (262)
234 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.9E-35 1.3E-39 320.3 19.2 278 662-966 5-285 (301)
235 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.6E-34 3.5E-39 311.3 22.1 252 664-966 1-263 (267)
236 cd05085 PTKc_Fer Catalytic dom 100.0 1.7E-34 3.7E-39 307.8 21.9 247 669-969 1-249 (250)
237 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-34 2.9E-39 315.3 21.3 278 664-966 1-281 (285)
238 cd07849 STKc_ERK1_2_like Catal 100.0 5.1E-35 1.1E-39 325.9 18.2 287 662-967 4-292 (336)
239 cd08223 STKc_Nek4 Catalytic do 100.0 2.3E-34 4.9E-39 308.3 22.4 252 664-967 1-254 (257)
240 cd06612 STKc_MST1_2 Catalytic 100.0 9.1E-35 2E-39 311.2 19.2 251 662-966 2-252 (256)
241 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-34 2.3E-39 313.3 19.7 240 670-969 2-274 (274)
242 cd08221 STKc_Nek9 Catalytic do 100.0 2.3E-34 4.9E-39 308.1 22.1 251 664-967 1-253 (256)
243 cd05040 PTKc_Ack_like Catalyti 100.0 1.9E-34 4.1E-39 308.8 21.3 251 669-969 1-256 (257)
244 cd06651 STKc_MEKK3 Catalytic d 100.0 2.2E-34 4.7E-39 309.9 21.9 254 663-966 2-260 (266)
245 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.1E-34 2.4E-39 315.5 19.7 263 663-969 5-268 (284)
246 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.7E-34 3.7E-39 314.6 21.2 276 663-966 1-282 (286)
247 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.5E-34 3.2E-39 314.9 20.7 255 663-967 1-262 (286)
248 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.5E-34 3.2E-39 314.3 20.5 266 653-966 6-278 (282)
249 cd05050 PTKc_Musk Catalytic do 100.0 1.4E-34 3E-39 315.4 20.1 267 662-970 4-288 (288)
250 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.9E-34 4.2E-39 320.9 21.7 271 662-974 11-296 (334)
251 cd08227 PK_STRAD_alpha Pseudok 100.0 1.1E-34 2.4E-39 321.7 19.4 284 667-972 2-314 (327)
252 cd05624 STKc_MRCK_beta Catalyt 100.0 5.5E-35 1.2E-39 324.3 16.9 256 663-967 1-266 (331)
253 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-34 4.6E-39 311.6 21.0 249 663-967 1-251 (274)
254 cd08218 STKc_Nek1 Catalytic do 100.0 2.4E-34 5.2E-39 307.9 21.2 250 664-966 1-252 (256)
255 KOG0584 Serine/threonine prote 100.0 9.7E-36 2.1E-40 322.8 10.4 248 667-967 44-296 (632)
256 KOG0986 G protein-coupled rece 100.0 1.8E-35 3.8E-40 306.5 11.8 262 649-961 171-435 (591)
257 cd05623 STKc_MRCK_alpha Cataly 100.0 7.8E-35 1.7E-39 323.4 17.6 256 663-967 1-266 (332)
258 KOG0579 Ste20-like serine/thre 100.0 4.5E-36 9.7E-41 320.6 7.2 251 664-966 33-288 (1187)
259 cd05112 PTKc_Itk Catalytic dom 100.0 2.4E-34 5.1E-39 307.9 20.6 253 662-969 3-256 (256)
260 PHA03207 serine/threonine kina 100.0 1.9E-34 4.1E-39 327.3 20.9 274 662-967 91-375 (392)
261 cd05083 PTKc_Chk Catalytic dom 100.0 1.8E-34 3.9E-39 308.3 19.6 247 663-970 6-253 (254)
262 cd05073 PTKc_Hck Catalytic dom 100.0 2.8E-34 6.1E-39 307.9 21.0 255 661-970 4-259 (260)
263 cd07839 STKc_CDK5 Catalytic do 100.0 8.7E-35 1.9E-39 316.5 17.1 270 664-966 1-280 (284)
264 cd07855 STKc_ERK5 Catalytic do 100.0 1.3E-34 2.9E-39 322.2 18.8 288 662-967 4-294 (334)
265 cd06630 STKc_MEKK1 Catalytic d 100.0 2.6E-34 5.6E-39 309.9 20.4 256 664-966 1-263 (268)
266 cd06652 STKc_MEKK2 Catalytic d 100.0 4.1E-34 9E-39 307.6 21.6 254 663-966 2-260 (265)
267 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 5.6E-34 1.2E-38 307.3 22.6 257 669-969 1-268 (269)
268 cd08220 STKc_Nek8 Catalytic do 100.0 4E-34 8.6E-39 306.2 21.3 249 664-966 1-252 (256)
269 KOG0604 MAP kinase-activated p 100.0 2.1E-35 4.5E-40 290.6 10.2 258 661-966 59-321 (400)
270 cd05042 PTKc_Aatyk Catalytic d 100.0 4.6E-34 1E-38 308.0 21.8 257 669-969 1-268 (269)
271 cd07867 STKc_CDC2L6 Catalytic 100.0 3.5E-34 7.7E-39 317.0 21.1 205 669-885 7-218 (317)
272 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9.8E-35 2.1E-39 311.0 16.0 241 669-969 1-258 (258)
273 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.1E-34 4.5E-39 312.1 18.5 248 664-967 5-253 (277)
274 cd05041 PTKc_Fes_like Catalyti 100.0 5.9E-34 1.3E-38 303.8 21.6 248 669-969 1-250 (251)
275 cd05586 STKc_Sck1_like Catalyt 100.0 7.8E-35 1.7E-39 323.5 15.3 241 671-966 1-252 (330)
276 cd06626 STKc_MEKK4 Catalytic d 100.0 7.2E-34 1.6E-38 305.8 22.3 255 664-966 1-260 (264)
277 cd06605 PKc_MAPKK Catalytic do 100.0 2.4E-34 5.3E-39 309.6 18.6 254 663-967 1-257 (265)
278 cd06640 STKc_MST4 Catalytic do 100.0 4.9E-34 1.1E-38 309.1 21.0 249 663-967 4-253 (277)
279 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.8E-34 8.2E-39 312.5 20.2 280 661-966 3-287 (291)
280 cd06632 STKc_MEKK1_plant Catal 100.0 6E-34 1.3E-38 305.2 21.3 248 664-966 1-254 (258)
281 cd05580 STKc_PKA Catalytic dom 100.0 4.7E-34 1E-38 311.4 20.8 245 663-966 1-253 (290)
282 cd07844 STKc_PCTAIRE_like Cata 100.0 3.5E-34 7.7E-39 312.8 19.8 201 662-885 4-206 (291)
283 cd06631 STKc_YSK4 Catalytic do 100.0 7.1E-34 1.5E-38 305.9 21.8 253 664-966 1-261 (265)
284 cd06658 STKc_PAK5 Catalytic do 100.0 2E-34 4.3E-39 314.1 17.7 249 665-967 24-272 (292)
285 cd05046 PTK_CCK4 Pseudokinase 100.0 4.8E-34 1E-38 309.0 20.5 263 663-969 5-274 (275)
286 cd07846 STKc_CDKL2_3 Catalytic 100.0 2E-34 4.4E-39 314.0 17.5 268 663-966 1-282 (286)
287 cd06623 PKc_MAPKK_plant_like C 100.0 8.5E-34 1.9E-38 305.2 22.2 253 663-967 1-256 (264)
288 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.6E-34 2.1E-38 308.4 22.8 265 663-967 1-266 (287)
289 cd05609 STKc_MAST Catalytic do 100.0 6E-34 1.3E-38 312.9 21.3 259 663-970 1-273 (305)
290 smart00219 TyrKc Tyrosine kina 100.0 8.7E-34 1.9E-38 304.0 22.0 252 665-968 1-258 (258)
291 cd05574 STKc_phototropin_like 100.0 6.3E-34 1.4E-38 314.7 21.1 256 663-966 1-288 (316)
292 cd06608 STKc_myosinIII_like Ca 100.0 3.7E-34 8E-39 310.0 18.8 262 660-966 3-271 (275)
293 cd08217 STKc_Nek2 Catalytic do 100.0 7.1E-34 1.5E-38 305.9 20.8 255 664-967 1-262 (265)
294 cd06659 STKc_PAK6 Catalytic do 100.0 3.7E-34 8E-39 312.8 18.5 249 665-967 23-271 (297)
295 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.2E-33 2.7E-38 305.5 22.2 265 665-971 1-272 (273)
296 KOG0596 Dual specificity; seri 100.0 1.5E-34 3.2E-39 307.0 14.6 254 662-967 360-627 (677)
297 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.6E-34 1E-38 318.1 18.9 291 662-973 4-299 (337)
298 KOG0666 Cyclin C-dependent kin 100.0 3.7E-35 8E-40 289.9 8.7 287 662-967 23-337 (438)
299 cd07860 STKc_CDK2_3 Catalytic 100.0 8E-34 1.7E-38 308.9 20.2 277 664-966 1-280 (284)
300 cd07832 STKc_CCRK Catalytic do 100.0 8.7E-34 1.9E-38 309.0 20.2 278 664-967 1-282 (286)
301 cd05044 PTKc_c-ros Catalytic d 100.0 7E-34 1.5E-38 306.7 19.2 255 669-969 1-268 (269)
302 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.3E-33 2.8E-38 304.3 21.2 261 663-966 1-263 (267)
303 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 8.3E-34 1.8E-38 304.3 19.4 239 669-969 1-259 (259)
304 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.9E-33 6.2E-38 301.4 23.6 256 669-969 1-267 (268)
305 cd06647 STKc_PAK_I Catalytic d 100.0 8E-34 1.7E-38 309.7 19.4 252 662-967 18-269 (293)
306 cd08528 STKc_Nek10 Catalytic d 100.0 1.3E-33 2.9E-38 304.5 20.9 256 664-969 1-268 (269)
307 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.6E-34 1.6E-38 308.9 19.1 254 663-966 1-260 (283)
308 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.1E-33 4.6E-38 303.5 22.2 256 664-967 2-269 (272)
309 PHA02882 putative serine/threo 100.0 1.5E-33 3.3E-38 307.5 20.9 266 662-968 11-293 (294)
310 cd06648 STKc_PAK_II Catalytic 100.0 1.8E-33 4E-38 305.6 21.5 249 664-966 20-268 (285)
311 cd05578 STKc_Yank1 Catalytic d 100.0 5.5E-34 1.2E-38 305.4 17.1 248 664-965 1-253 (258)
312 KOG4645 MAPKKK (MAP kinase kin 100.0 1E-35 2.2E-40 344.2 3.9 257 661-967 1233-1494(1509)
313 cd07833 STKc_CDKL Catalytic do 100.0 1E-33 2.2E-38 308.8 19.1 275 663-966 1-284 (288)
314 KOG0690 Serine/threonine prote 100.0 1.5E-34 3.3E-39 286.7 11.1 242 662-959 167-411 (516)
315 KOG4250 TANK binding protein k 100.0 2.4E-34 5.2E-39 315.8 13.5 287 665-973 15-312 (732)
316 cd06607 STKc_TAO Catalytic dom 100.0 2.8E-33 6.1E-38 307.8 21.9 248 662-967 14-267 (307)
317 cd06641 STKc_MST3 Catalytic do 100.0 3.4E-33 7.5E-38 302.5 22.2 248 664-967 5-253 (277)
318 cd07850 STKc_JNK Catalytic dom 100.0 2.5E-33 5.5E-38 314.3 21.7 204 660-885 13-219 (353)
319 KOG0983 Mitogen-activated prot 100.0 1.4E-34 3.1E-39 280.9 9.9 253 663-967 92-349 (391)
320 cd07841 STKc_CDK7 Catalytic do 100.0 2E-33 4.4E-38 308.0 20.2 272 664-966 1-281 (298)
321 cd07865 STKc_CDK9 Catalytic do 100.0 2.6E-33 5.5E-38 309.2 21.0 286 661-966 10-306 (310)
322 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.3E-33 9.3E-38 299.5 21.9 254 663-966 2-260 (264)
323 KOG0586 Serine/threonine prote 100.0 6.3E-34 1.4E-38 308.7 15.3 250 661-967 54-306 (596)
324 cd07843 STKc_CDC2L1 Catalytic 100.0 2.3E-33 5.1E-38 306.6 20.0 278 663-966 5-289 (293)
325 cd08225 STKc_Nek5 Catalytic do 100.0 2E-33 4.4E-38 300.9 19.1 251 664-967 1-254 (257)
326 KOG1024 Receptor-like protein 100.0 1.3E-33 2.9E-38 287.0 16.5 277 656-976 277-560 (563)
327 KOG0607 MAP kinase-interacting 100.0 1.9E-34 4.2E-39 285.7 10.1 269 655-966 75-360 (463)
328 cd05633 STKc_GRK3 Catalytic do 100.0 2.5E-33 5.3E-38 303.5 19.8 243 670-967 1-255 (279)
329 cd07857 STKc_MPK1 Catalytic do 100.0 2.7E-33 6E-38 311.4 20.3 286 664-967 1-292 (332)
330 cd07842 STKc_CDK8_like Catalyt 100.0 3.2E-33 6.9E-38 309.3 20.7 288 664-966 1-312 (316)
331 cd06917 STKc_NAK1_like Catalyt 100.0 3.6E-33 7.8E-38 302.6 20.7 249 664-967 2-255 (277)
332 cd05122 PKc_STE Catalytic doma 100.0 5.9E-33 1.3E-37 296.4 21.8 250 664-966 1-250 (253)
333 cd05577 STKc_GRK Catalytic dom 100.0 3.4E-33 7.4E-38 302.5 20.1 245 671-966 1-253 (277)
334 cd07831 STKc_MOK Catalytic dom 100.0 3.7E-33 8.1E-38 303.4 20.3 272 665-966 1-278 (282)
335 cd06614 STKc_PAK Catalytic dom 100.0 4.4E-33 9.5E-38 303.3 20.7 255 660-967 16-270 (286)
336 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3E-33 6.5E-38 309.7 19.6 281 658-967 5-288 (328)
337 cd07845 STKc_CDK10 Catalytic d 100.0 3.1E-33 6.7E-38 308.0 19.5 282 661-967 5-290 (309)
338 PHA03390 pk1 serine/threonine- 100.0 8.1E-33 1.8E-37 297.3 22.2 247 659-966 10-261 (267)
339 cd07837 STKc_CdkB_plant Cataly 100.0 5.2E-33 1.1E-37 304.3 20.7 283 663-966 1-290 (295)
340 cd07836 STKc_Pho85 Catalytic d 100.0 4.7E-33 1E-37 302.9 20.2 278 664-966 1-280 (284)
341 KOG1035 eIF-2alpha kinase GCN2 100.0 1.1E-33 2.3E-38 326.2 15.2 263 660-966 476-870 (1351)
342 cd07834 STKc_MAPK Catalytic do 100.0 4E-33 8.7E-38 310.3 19.5 292 664-973 1-297 (330)
343 cd06616 PKc_MKK4 Catalytic dom 100.0 3.7E-33 7.9E-38 304.3 18.7 255 664-967 5-267 (288)
344 cd07835 STKc_CDK1_like Catalyt 100.0 5.8E-33 1.2E-37 302.0 20.2 276 665-966 1-279 (283)
345 cd07864 STKc_CDK12 Catalytic d 100.0 9.1E-33 2E-37 303.5 21.3 286 660-966 4-298 (302)
346 KOG0200 Fibroblast/platelet-de 100.0 4.7E-33 1E-37 328.1 20.0 276 658-973 291-581 (609)
347 KOG0669 Cyclin T-dependent kin 100.0 5.3E-35 1.2E-39 280.4 2.6 288 662-967 16-315 (376)
348 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-32 2.6E-37 295.0 21.2 252 664-966 1-254 (258)
349 KOG0662 Cyclin-dependent kinas 100.0 9.6E-34 2.1E-38 257.8 10.6 198 664-884 3-204 (292)
350 cd06635 STKc_TAO1 Catalytic do 100.0 1.5E-32 3.3E-37 303.2 22.6 247 665-969 27-279 (317)
351 cd07852 STKc_MAPK15 Catalytic 100.0 6.3E-33 1.4E-37 309.3 19.6 286 661-967 5-295 (337)
352 cd06657 STKc_PAK4 Catalytic do 100.0 7.3E-33 1.6E-37 301.6 19.6 247 667-967 24-270 (292)
353 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-32 2.3E-37 307.9 21.2 288 655-967 9-300 (345)
354 cd05572 STKc_cGK_PKG Catalytic 100.0 1.2E-32 2.5E-37 295.8 20.8 243 671-966 1-251 (262)
355 cd07840 STKc_CDK9_like Catalyt 100.0 1.2E-32 2.6E-37 300.3 21.0 277 665-966 1-283 (287)
356 cd05611 STKc_Rim15_like Cataly 100.0 7.8E-33 1.7E-37 296.9 19.3 243 669-967 2-248 (260)
357 PLN00009 cyclin-dependent kina 100.0 1E-32 2.2E-37 301.7 20.3 279 663-967 2-284 (294)
358 cd07838 STKc_CDK4_6_like Catal 100.0 1.1E-32 2.3E-37 300.6 20.2 278 665-966 1-283 (287)
359 cd07879 STKc_p38delta_MAPK13 C 100.0 8.3E-33 1.8E-37 308.5 19.8 283 662-973 14-305 (342)
360 cd06627 STKc_Cdc7_like Catalyt 100.0 1.8E-32 3.8E-37 293.1 21.5 248 664-966 1-250 (254)
361 PHA03210 serine/threonine kina 100.0 3.6E-33 7.8E-38 324.9 17.3 281 662-967 147-454 (501)
362 cd06606 STKc_MAPKKK Catalytic 100.0 2.4E-32 5.2E-37 293.0 21.7 254 664-966 1-256 (260)
363 cd05579 STKc_MAST_like Catalyt 100.0 7.6E-33 1.6E-37 297.9 17.7 248 671-968 1-255 (265)
364 cd05606 STKc_beta_ARK Catalyti 100.0 2.3E-32 5E-37 295.8 21.5 243 670-967 1-255 (278)
365 cd08530 STKc_CNK2-like Catalyt 100.0 9.6E-33 2.1E-37 295.5 18.3 250 664-966 1-252 (256)
366 KOG0671 LAMMER dual specificit 100.0 1.7E-33 3.8E-38 287.4 11.3 277 662-966 88-405 (415)
367 cd05118 STKc_CMGC Catalytic do 100.0 1.8E-32 3.8E-37 298.2 20.1 276 665-966 1-279 (283)
368 cd07880 STKc_p38gamma_MAPK12 C 100.0 2E-32 4.3E-37 305.4 19.9 279 660-966 12-297 (343)
369 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.5E-32 3.2E-37 306.5 18.8 286 662-967 4-300 (342)
370 cd05583 STKc_MSK_N N-terminal 100.0 1.8E-32 3.9E-37 298.8 19.1 257 664-971 1-267 (288)
371 cd06633 STKc_TAO3 Catalytic do 100.0 8.3E-32 1.8E-36 296.6 24.6 245 665-967 23-273 (313)
372 cd05581 STKc_PDK1 Catalytic do 100.0 1.4E-32 3E-37 298.6 18.1 252 663-966 1-276 (280)
373 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-32 3.1E-37 300.6 18.0 255 661-967 13-273 (296)
374 cd08226 PK_STRAD_beta Pseudoki 100.0 2.5E-32 5.4E-37 303.1 20.0 200 669-885 4-212 (328)
375 cd08216 PK_STRAD Pseudokinase 100.0 3E-32 6.5E-37 301.1 20.5 269 675-967 12-295 (314)
376 cd07851 STKc_p38 Catalytic dom 100.0 6.4E-33 1.4E-37 309.6 15.2 283 660-967 12-298 (343)
377 cd06634 STKc_TAO2 Catalytic do 100.0 3.2E-32 6.9E-37 299.4 19.7 249 663-969 15-269 (308)
378 cd07830 STKc_MAK_like Catalyti 100.0 3.7E-32 8E-37 295.7 19.7 275 665-966 1-279 (283)
379 cd07866 STKc_BUR1 Catalytic do 100.0 2.6E-32 5.6E-37 301.3 18.6 285 662-966 7-307 (311)
380 cd05613 STKc_MSK1_N N-terminal 100.0 5.6E-32 1.2E-36 295.2 21.0 253 664-967 1-268 (290)
381 KOG0612 Rho-associated, coiled 100.0 2.9E-33 6.3E-38 319.9 9.8 259 656-966 68-337 (1317)
382 PTZ00024 cyclin-dependent prot 100.0 7.3E-32 1.6E-36 300.6 20.7 279 662-966 7-312 (335)
383 KOG1006 Mitogen-activated prot 100.0 3.4E-34 7.4E-39 277.4 0.9 253 667-967 68-327 (361)
384 cd07829 STKc_CDK_like Catalyti 100.0 6.5E-32 1.4E-36 293.6 18.7 270 665-966 1-278 (282)
385 cd08222 STKc_Nek11 Catalytic d 100.0 7E-32 1.5E-36 289.4 17.6 251 664-966 1-256 (260)
386 KOG0587 Traf2- and Nck-interac 100.0 4E-32 8.6E-37 303.9 15.0 267 653-966 9-281 (953)
387 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-31 4E-36 284.5 19.4 237 671-963 1-240 (250)
388 KOG0696 Serine/threonine prote 100.0 1.5E-32 3.2E-37 280.5 10.2 242 662-959 348-593 (683)
389 KOG0668 Casein kinase II, alph 100.0 2.7E-32 5.8E-37 258.3 10.1 286 661-974 36-331 (338)
390 cd05610 STKc_MASTL Catalytic d 100.0 3E-31 6.5E-36 318.2 20.6 147 662-827 3-152 (669)
391 KOG1290 Serine/threonine prote 100.0 4.5E-31 9.7E-36 276.7 18.1 136 663-812 78-221 (590)
392 cd05576 STKc_RPK118_like Catal 100.0 2.4E-31 5.3E-36 280.5 16.4 222 674-963 4-225 (237)
393 KOG0603 Ribosomal protein S6 k 100.0 1.1E-31 2.3E-36 293.1 13.6 242 661-967 320-563 (612)
394 KOG4236 Serine/threonine prote 100.0 4.4E-32 9.4E-37 284.9 8.9 244 668-965 569-817 (888)
395 KOG1151 Tousled-like protein k 100.0 8.4E-32 1.8E-36 277.2 9.3 262 662-966 462-740 (775)
396 KOG0695 Serine/threonine prote 100.0 8.2E-31 1.8E-35 260.9 14.2 249 661-959 248-502 (593)
397 PLN03225 Serine/threonine-prot 100.0 2.5E-30 5.5E-35 301.9 19.0 281 661-967 130-450 (566)
398 KOG0984 Mitogen-activated prot 100.0 6.3E-31 1.4E-35 245.5 8.3 211 658-888 41-257 (282)
399 KOG0614 cGMP-dependent protein 100.0 2.2E-31 4.7E-36 279.2 5.7 243 663-960 420-665 (732)
400 PLN03224 probable serine/threo 100.0 2E-29 4.4E-34 285.9 20.4 280 661-966 143-499 (507)
401 KOG1027 Serine/threonine prote 100.0 5.2E-31 1.1E-35 293.6 6.2 247 665-965 511-765 (903)
402 smart00220 S_TKc Serine/Threon 100.0 3.6E-29 7.8E-34 265.3 18.7 239 675-966 1-240 (244)
403 KOG0664 Nemo-like MAPK-related 100.0 3.8E-31 8.3E-36 256.5 0.6 203 665-885 55-260 (449)
404 KOG0608 Warts/lats-like serine 100.0 3.3E-29 7.1E-34 268.8 11.9 216 655-889 618-877 (1034)
405 KOG1345 Serine/threonine kinas 100.0 4E-29 8.7E-34 242.9 9.9 257 663-971 24-288 (378)
406 KOG4237 Extracellular matrix p 100.0 1.4E-30 2.9E-35 266.2 -1.6 390 32-434 67-498 (498)
407 KOG1152 Signal transduction se 100.0 5.2E-29 1.1E-33 265.6 9.0 198 662-884 560-770 (772)
408 KOG0576 Mitogen-activated prot 100.0 1.9E-29 4.2E-34 273.5 5.6 255 661-966 13-270 (829)
409 KOG4237 Extracellular matrix p 99.9 7.1E-30 1.5E-34 261.0 -1.2 149 60-211 50-199 (498)
410 KOG0665 Jun-N-terminal kinase 99.9 5.6E-28 1.2E-32 241.3 10.4 280 661-967 15-310 (369)
411 KOG1167 Serine/threonine prote 99.9 1.5E-27 3.3E-32 247.9 12.2 284 660-967 33-381 (418)
412 KOG0670 U4/U6-associated splic 99.9 6.5E-28 1.4E-32 253.9 7.4 200 662-885 431-637 (752)
413 cd00180 PKc Catalytic domain o 99.9 5E-26 1.1E-30 235.5 19.3 211 671-967 1-214 (215)
414 smart00221 STYKc Protein kinas 99.9 2.9E-25 6.3E-30 232.4 17.7 199 665-884 1-201 (225)
415 PLN03210 Resistant to P. syrin 99.9 1.9E-23 4.2E-28 265.2 26.6 344 50-459 552-903 (1153)
416 PLN03210 Resistant to P. syrin 99.9 4.9E-23 1.1E-27 261.5 25.2 339 193-555 551-904 (1153)
417 PLN00181 protein SPA1-RELATED; 99.9 1.3E-24 2.9E-29 268.1 10.4 204 716-967 28-265 (793)
418 smart00750 KIND kinase non-cat 99.9 4.8E-24 1E-28 213.7 12.5 170 750-974 1-172 (176)
419 PRK15387 E3 ubiquitin-protein 99.9 1.1E-23 2.5E-28 246.6 15.6 161 353-539 303-463 (788)
420 PRK15387 E3 ubiquitin-protein 99.9 1.7E-23 3.7E-28 245.2 16.9 262 251-563 203-464 (788)
421 KOG0195 Integrin-linked kinase 99.9 1.6E-24 3.4E-29 210.7 6.5 247 666-972 193-447 (448)
422 PRK09188 serine/threonine prot 99.9 5.6E-23 1.2E-27 223.5 15.6 170 659-858 14-195 (365)
423 KOG1164 Casein kinase (serine/ 99.9 1E-21 2.3E-26 215.7 22.0 267 664-975 19-301 (322)
424 KOG1163 Casein kinase (serine/ 99.9 6.3E-22 1.4E-26 189.8 13.0 269 661-975 13-288 (341)
425 KOG1165 Casein kinase (serine/ 99.9 1.3E-21 2.9E-26 196.3 15.7 266 663-974 28-302 (449)
426 KOG0590 Checkpoint kinase and 99.9 1E-22 2.2E-27 236.6 5.6 258 666-967 321-585 (601)
427 PRK15370 E3 ubiquitin-protein 99.8 2.5E-21 5.4E-26 229.0 12.8 279 33-380 179-461 (754)
428 PRK15370 E3 ubiquitin-protein 99.8 2.3E-21 5E-26 229.3 11.6 201 305-536 243-447 (754)
429 PRK10359 lipopolysaccharide co 99.8 1.9E-20 4.2E-25 188.5 9.6 175 662-877 30-216 (232)
430 COG0515 SPS1 Serine/threonine 99.8 3.9E-19 8.4E-24 198.9 20.7 264 665-967 2-275 (384)
431 KOG1240 Protein kinase contain 99.8 1.5E-20 3.2E-25 215.6 6.8 249 664-967 24-291 (1431)
432 cd05147 RIO1_euk RIO kinase fa 99.8 9.6E-20 2.1E-24 182.6 11.7 140 668-830 2-168 (190)
433 KOG4158 BRPK/PTEN-induced prot 99.8 8.9E-20 1.9E-24 187.2 10.8 205 718-969 274-512 (598)
434 KOG0617 Ras suppressor protein 99.8 1.4E-21 3.1E-26 177.5 -2.5 164 347-517 28-192 (264)
435 PF14531 Kinase-like: Kinase-l 99.8 6.9E-20 1.5E-24 190.2 8.0 242 665-958 14-288 (288)
436 KOG0617 Ras suppressor protein 99.8 4E-21 8.6E-26 174.6 -2.0 163 52-220 29-192 (264)
437 cd05145 RIO1_like RIO kinase f 99.8 8.8E-19 1.9E-23 176.8 14.4 140 668-831 2-169 (190)
438 PRK12274 serine/threonine prot 99.8 9.7E-19 2.1E-23 171.8 13.4 187 666-884 5-208 (218)
439 KOG1023 Natriuretic peptide re 99.8 6.1E-19 1.3E-23 194.7 11.7 218 714-973 1-226 (484)
440 KOG1166 Mitotic checkpoint ser 99.8 1.3E-18 2.9E-23 205.1 12.7 199 659-882 694-902 (974)
441 cd00116 LRR_RI Leucine-rich re 99.7 2E-19 4.4E-24 199.1 -0.2 268 246-533 20-319 (319)
442 KOG0603 Ribosomal protein S6 k 99.7 6E-19 1.3E-23 193.8 3.0 226 670-961 1-232 (612)
443 PRK10345 hypothetical protein; 99.7 2.2E-17 4.7E-22 166.7 13.5 140 665-826 4-156 (210)
444 smart00090 RIO RIO-like kinase 99.7 2.5E-17 5.4E-22 170.9 13.7 143 663-829 28-198 (237)
445 cd00116 LRR_RI Leucine-rich re 99.7 7.4E-20 1.6E-24 202.6 -6.0 154 36-189 2-178 (319)
446 KOG1033 eIF-2alpha kinase PEK/ 99.7 7.7E-18 1.7E-22 181.5 4.6 127 738-878 329-457 (516)
447 PRK14879 serine/threonine prot 99.7 3.2E-16 7E-21 161.9 15.5 134 669-828 2-143 (211)
448 cd05144 RIO2_C RIO kinase fami 99.7 6.7E-16 1.5E-20 157.3 14.2 140 661-830 13-176 (198)
449 KOG0606 Microtubule-associated 99.7 8.3E-17 1.8E-21 185.4 7.9 212 662-959 82-304 (1205)
450 PRK09605 bifunctional UGMP fam 99.6 1.3E-15 2.8E-20 179.1 14.4 144 655-828 325-476 (535)
451 TIGR03724 arch_bud32 Kae1-asso 99.6 1.7E-15 3.6E-20 154.9 11.0 130 670-828 1-138 (199)
452 KOG0532 Leucine-rich repeat (L 99.6 1.6E-16 3.5E-21 170.9 -3.0 174 333-517 80-253 (722)
453 cd05119 RIO RIO kinase family, 99.6 1.8E-14 3.9E-19 145.7 12.0 136 668-830 2-165 (187)
454 cd05120 APH_ChoK_like Aminogly 99.6 3.2E-14 6.8E-19 138.7 12.5 136 667-829 2-139 (155)
455 KOG0590 Checkpoint kinase and 99.5 1.5E-15 3.2E-20 177.0 0.2 258 662-966 19-285 (601)
456 PRK01723 3-deoxy-D-manno-octul 99.5 1.2E-13 2.6E-18 143.8 13.7 139 668-828 36-191 (239)
457 KOG0532 Leucine-rich repeat (L 99.5 6.6E-16 1.4E-20 166.3 -3.2 197 349-555 72-271 (722)
458 PLN03150 hypothetical protein; 99.5 3.6E-14 7.7E-19 168.4 9.6 117 474-593 419-538 (623)
459 KOG1266 Protein kinase [Signal 99.5 4.4E-14 9.6E-19 142.5 5.9 164 711-882 118-281 (458)
460 PLN03150 hypothetical protein; 99.5 1.3E-13 2.8E-18 163.7 10.4 130 11-141 390-528 (623)
461 COG4886 Leucine-rich repeat (L 99.5 8E-14 1.7E-18 158.8 7.8 202 332-543 97-299 (394)
462 COG4886 Leucine-rich repeat (L 99.4 1.6E-13 3.6E-18 156.2 7.8 200 355-563 96-296 (394)
463 KOG1243 Protein kinase [Genera 99.3 1.7E-11 3.8E-16 136.7 17.0 172 681-881 30-201 (690)
464 KOG0601 Cyclin-dependent kinas 99.3 1.1E-12 2.4E-17 145.3 6.5 251 664-966 115-378 (524)
465 TIGR01982 UbiB 2-polyprenylphe 99.3 5.9E-12 1.3E-16 142.7 12.4 143 668-831 122-309 (437)
466 KOG1259 Nischarin, modulator o 99.3 1.1E-12 2.5E-17 130.4 2.2 209 344-562 206-417 (490)
467 cd05146 RIO3_euk RIO kinase fa 99.3 8.9E-11 1.9E-15 116.1 14.2 137 669-830 3-175 (197)
468 PRK04750 ubiB putative ubiquin 99.2 5.5E-11 1.2E-15 135.9 11.6 147 663-831 120-316 (537)
469 cd05151 ChoK Choline Kinase (C 99.2 5.7E-11 1.2E-15 118.0 10.2 131 668-828 3-136 (170)
470 KOG0531 Protein phosphatase 1, 99.2 5.4E-12 1.2E-16 143.7 0.3 269 33-317 50-319 (414)
471 KOG3207 Beta-tubulin folding c 99.1 6E-12 1.3E-16 132.4 -0.1 209 77-287 118-340 (505)
472 KOG1259 Nischarin, modulator o 99.1 5E-12 1.1E-16 125.9 -1.0 129 55-189 283-412 (490)
473 PF14580 LRR_9: Leucine-rich r 99.1 1.6E-11 3.4E-16 119.0 2.3 125 52-182 15-146 (175)
474 KOG0601 Cyclin-dependent kinas 99.1 2.8E-11 6.1E-16 134.2 4.3 248 662-971 264-518 (524)
475 COG4248 Uncharacterized protei 99.1 2.2E-09 4.8E-14 112.8 17.6 280 666-981 14-310 (637)
476 KOG1909 Ran GTPase-activating 99.1 2E-12 4.3E-17 132.4 -6.1 257 50-340 24-310 (382)
477 PF14580 LRR_9: Leucine-rich r 99.1 2.7E-11 5.9E-16 117.3 2.0 108 77-189 16-126 (175)
478 KOG0531 Protein phosphatase 1, 99.1 2.5E-11 5.5E-16 138.2 1.4 152 348-510 114-268 (414)
479 KOG0606 Microtubule-associated 99.1 6.3E-11 1.4E-15 137.7 3.2 253 661-962 802-1084(1205)
480 KOG1909 Ran GTPase-activating 99.1 1.1E-11 2.4E-16 127.0 -2.8 237 30-286 28-311 (382)
481 COG3642 Mn2+-dependent serine/ 99.0 3.3E-09 7.1E-14 100.6 13.3 129 669-828 2-140 (204)
482 KOG3207 Beta-tubulin folding c 99.0 4E-11 8.8E-16 126.2 0.5 208 247-486 119-339 (505)
483 KOG3741 Poly(A) ribonuclease s 99.0 1.3E-08 2.9E-13 110.0 17.3 183 675-882 288-475 (655)
484 cd05154 ACAD10_11_like Acyl-Co 99.0 7.1E-09 1.5E-13 108.0 14.3 146 668-828 3-206 (223)
485 KOG4658 Apoptotic ATPase [Sign 98.9 5E-10 1.1E-14 135.7 5.2 129 56-187 523-653 (889)
486 PF01163 RIO1: RIO1 family; I 98.9 6.3E-09 1.4E-13 102.8 11.8 126 678-830 1-157 (188)
487 KOG3087 Serine/threonine prote 98.9 8.5E-09 1.8E-13 97.0 11.1 141 667-828 11-165 (229)
488 COG0478 RIO-like serine/threon 98.9 1.2E-08 2.6E-13 102.7 10.9 135 665-828 93-251 (304)
489 PF13855 LRR_8: Leucine rich r 98.8 2.4E-09 5.2E-14 85.2 3.2 61 56-116 1-61 (61)
490 PRK15123 lipopolysaccharide co 98.8 6.3E-08 1.4E-12 101.9 14.3 146 669-828 28-194 (268)
491 KOG4658 Apoptotic ATPase [Sign 98.8 4.3E-09 9.2E-14 127.7 6.1 130 79-211 522-653 (889)
492 PF13855 LRR_8: Leucine rich r 98.8 4.5E-09 9.8E-14 83.7 3.9 61 473-533 1-61 (61)
493 KOG2137 Protein kinase [Signal 98.7 7.8E-09 1.7E-13 116.3 1.8 152 783-965 106-263 (700)
494 PRK09902 hypothetical protein; 98.6 5.6E-07 1.2E-11 89.2 13.1 143 671-828 26-179 (216)
495 KOG4579 Leucine-rich repeat (L 98.6 3.8E-09 8.2E-14 93.7 -2.3 134 426-563 29-165 (177)
496 KOG1859 Leucine-rich repeat pr 98.6 1.4E-09 3.1E-14 121.0 -6.3 123 426-556 166-291 (1096)
497 COG1718 RIO1 Serine/threonine 98.6 7.4E-07 1.6E-11 89.2 12.8 160 646-830 28-217 (268)
498 KOG4579 Leucine-rich repeat (L 98.5 6E-09 1.3E-13 92.5 -3.5 9 356-364 31-39 (177)
499 PF06176 WaaY: Lipopolysacchar 98.5 1.3E-06 2.9E-11 86.8 11.5 142 661-827 29-182 (229)
500 PF06293 Kdo: Lipopolysacchari 98.5 1.2E-06 2.7E-11 89.3 11.8 109 705-828 56-170 (206)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.2e-114 Score=1091.64 Aligned_cols=903 Identities=32% Similarity=0.503 Sum_probs=766.3
Q ss_pred cCCccccCCCCCCCCCceeeeeEEeCCCCcEEEEEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccC-CCCCC
Q 001974 4 HDPQGILNSWNDSGHFCEWKGITCGLRHRRVTVLNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFG-RLFRL 82 (988)
Q Consensus 4 ~~~~~~~~~w~~~~~~c~~~~v~c~~~~~~v~~l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L 82 (988)
.||.+.+++|..+.+||.|.||+|+. .++|+.|||++|++++.+++++..+++|++|+|++|++++.+|..+. .+++|
T Consensus 42 ~~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L 120 (968)
T PLN00113 42 NDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSL 120 (968)
T ss_pred CCCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCC
Confidence 47999999999888999999999985 56899999999999999999999999999999999999988887654 99999
Q ss_pred cEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeecccc
Q 001974 83 EALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAAN 162 (988)
Q Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 162 (988)
++|+|++|.+++.+|. +.+++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+|..|.++++|++|+|++|
T Consensus 121 ~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 198 (968)
T PLN00113 121 RYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASN 198 (968)
T ss_pred CEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCC
Confidence 9999999999988885 56899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCccccCcccccccccccccccCccchhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccC
Q 001974 163 AFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIP 242 (988)
Q Consensus 163 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p 242 (988)
.+.+.+|..|+++++|++|+|++|++++.+|..+.++++|++|++++|.+.+.+|..+. .+++|+.|++++|++++.+|
T Consensus 199 ~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p 277 (968)
T PLN00113 199 QLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLG-NLKNLQYLFLYQNKLSGPIP 277 (968)
T ss_pred CCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHh-CCCCCCEEECcCCeeeccCc
Confidence 99999999999999999999999999999999999999999999999999988887654 79999999999999999999
Q ss_pred cccccCCcccEEEeccccccCcccccccCCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCch
Q 001974 243 ISLSNASKLEFIEALDNSFSGKLSVNFGGMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHS 322 (988)
Q Consensus 243 ~~l~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~ 322 (988)
..+.++++|+.|++++|.+.+..|..+.++++|+.|++++|.++...+. .+..+++|++|++++|++++.+|..
T Consensus 278 ~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~------~~~~l~~L~~L~L~~n~l~~~~p~~ 351 (968)
T PLN00113 278 PSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPV------ALTSLPRLQVLQLWSNKFSGEIPKN 351 (968)
T ss_pred hhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCCh------hHhcCCCCCEEECcCCCCcCcCChH
Confidence 9999999999999999999999999999999999999999999865543 5678999999999999999999998
Q ss_pred hhhccccccEEEccCCccccCCCccccCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCC
Q 001974 323 IANLSDQLQNLIMTSNQLHGSIPSGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSIL 402 (988)
Q Consensus 323 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 402 (988)
+..+. +|+.|++++|++.+.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|+|++|++++.+|..|..+++|
T Consensus 352 l~~~~-~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L 430 (968)
T PLN00113 352 LGKHN-NLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLV 430 (968)
T ss_pred HhCCC-CCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCC
Confidence 88875 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEccccccccccccccccccccceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCC
Q 001974 403 SELLLNNNSLSGVIPSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSS 482 (988)
Q Consensus 403 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~ 482 (988)
+.|+|++|.+++.+|..+..+++|+.|++++|++.|.+|..+ ..+.+ +.|++++|++++.+|..+.++++|+.|+|++
T Consensus 431 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L-~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 508 (968)
T PLN00113 431 YFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRL-ENLDLSRNQFSGAVPRKLGSLSELMQLKLSE 508 (968)
T ss_pred CEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccc-eEEECcCCccCCccChhhhhhhccCEEECcC
Confidence 999999999999999999999999999999999998888765 45677 8999999999999999999999999999999
Q ss_pred cccccccCcccccCCCCcEEEecCccccccCCccccCccccCeeecCCCcccCcCccc-ccCCCCcEEeCCCCcCcccCC
Q 001974 483 NNLSGEIPSQLGLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGLIPKF-LEDLSLEYLNLSFNDLEGEVP 561 (988)
Q Consensus 483 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~l~l~~N~l~~~~p 561 (988)
|++++.+|..++.+++|+.|+|++|.++|.+|..|..+++|+.|||++|+++|.+|.. ..+.+|++|++++|+++|.+|
T Consensus 509 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 509 NKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 9999999999999999999999999999999999999999999999999999999886 677789999999999999999
Q ss_pred CCcccCcccccccccccccCCCCCCCCCCcccccCCCcccccchhhhhhhhhHHHHHHHHHHHhhhhhccccCCC-CCC-
Q 001974 562 TKGVFANISRISVAGFNRLCGGIPELQLPKCTEKNSRNQKISQRLKAIISTLSAVLGIVMVFFLCFCWFKRRRGP-SKQ- 639 (988)
Q Consensus 562 ~~~~~~~~~~~~~~~n~~lcg~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~- 639 (988)
..+++.++...++.||+.+||..+....+.|..... .. ....++++++++++.+++++++++ ++++|++. .++
T Consensus 589 ~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 663 (968)
T PLN00113 589 STGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK--TP--SWWFYITCTLGAFLVLALVAFGFV-FIRGRNNLELKRV 663 (968)
T ss_pred CcchhcccChhhhcCCccccCCccccCCCCCccccc--cc--eeeeehhHHHHHHHHHHHHHHHHH-HHHhhhccccccc
Confidence 999999999999999999999876555566643211 11 111122222222222222222222 22222211 111
Q ss_pred C-CChhHH-----HhhccccCHHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHH
Q 001974 640 Q-PSRPIL-----RKALQKVSYESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKA 713 (988)
Q Consensus 640 ~-~~~~~~-----~~~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~ 713 (988)
. ...... .+....++++++ ...|...+.||+|+||.||+|++..+++.||||+++.... ....|+++
T Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~ 736 (968)
T PLN00113 664 ENEDGTWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIAD 736 (968)
T ss_pred ccccccccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHH
Confidence 0 000000 011122333333 3457788899999999999999988999999999864322 22356889
Q ss_pred HHhcCCCCceEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHH
Q 001974 714 LKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLH 793 (988)
Q Consensus 714 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH 793 (988)
+++++||||++++++|.. ++..++||||+++|+|.++++ .++|.++.+|+.|||+|++|||
T Consensus 737 l~~l~HpnIv~~~~~~~~-----~~~~~lv~Ey~~~g~L~~~l~--------------~l~~~~~~~i~~~ia~~L~yLH 797 (968)
T PLN00113 737 MGKLQHPNIVKLIGLCRS-----EKGAYLIHEYIEGKNLSEVLR--------------NLSWERRRKIAIGIAKALRFLH 797 (968)
T ss_pred HhhCCCCCcceEEEEEEc-----CCCCEEEEeCCCCCcHHHHHh--------------cCCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999754 367899999999999999984 4788999999999999999999
Q ss_pred cCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHH
Q 001974 794 HHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILL 873 (988)
Q Consensus 794 ~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl 873 (988)
+.+.++|+||||||+||+++.++.+++. ||.+...... ....++..|+|||++.+..++.++|||||||++
T Consensus 798 ~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl 868 (968)
T PLN00113 798 CRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--------TKCFISSAYVAPETRETKDITEKSDIYGFGLIL 868 (968)
T ss_pred cCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC--------CCccccccccCcccccCCCCCcccchhhHHHHH
Confidence 7666799999999999999999988875 6655432111 123578999999999999999999999999999
Q ss_pred HHHHhCCCCCCccccCCcchHHHHHHHHhhh-hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccC
Q 001974 874 LEMVTGKKPTDVMFEGDLNLHNYARTALLDH-VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSV 952 (988)
Q Consensus 874 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 952 (988)
|||+||+.||+...........|++....+. ...++|+.+..... ...+...++.+++.+||+
T Consensus 869 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~l~~~Cl~ 932 (968)
T PLN00113 869 IELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS----------------VNQNEIVEVMNLALHCTA 932 (968)
T ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC----------------ccHHHHHHHHHHHHhhCc
Confidence 9999999999765555556666665443322 33344444322110 112344568899999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHh
Q 001974 953 ESPQDRMSITNVVHELQSVKNAL 975 (988)
Q Consensus 953 ~dP~~RPs~~evl~~L~~i~~~~ 975 (988)
.||++||||+|++++|+++.+.-
T Consensus 933 ~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 933 TDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred CCchhCcCHHHHHHHHHHhhccc
Confidence 99999999999999999986643
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.4e-61 Score=610.00 Aligned_cols=516 Identities=33% Similarity=0.514 Sum_probs=485.4
Q ss_pred CcEEEEEcCCCCCccccccccc-CCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceee
Q 001974 32 RRVTVLNLRSKGLSGSLSPYIG-NLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILF 110 (988)
Q Consensus 32 ~~v~~l~l~~~~~~~~~~~~l~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (988)
..++.|+|++|++++.+|..+. .+++|++|+|++|++++.+|. +.+++|++|+|++|.+.+.+|..|+.+++|++|+
T Consensus 93 ~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~ 170 (968)
T PLN00113 93 PYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLD 170 (968)
T ss_pred CCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEE
Confidence 5789999999999999998766 999999999999999988885 5689999999999999999999999999999999
Q ss_pred cCcccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccC
Q 001974 111 LGRNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSG 190 (988)
Q Consensus 111 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 190 (988)
|++|.+.+..|..|.++++|++|+|++|.+++.+|..|+++++|++|+|++|.+.+.+|..|+++++|++|+|++|++++
T Consensus 171 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 250 (968)
T PLN00113 171 LGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTG 250 (968)
T ss_pred CccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCccccccc
Q 001974 191 IIPPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFG 270 (988)
Q Consensus 191 ~~~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~ 270 (988)
.+|..+.++++|+.|++++|++.+.+|..+. .+++|+.|++++|.+++.+|..+.++++|+.|++++|.+.+..|..+.
T Consensus 251 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 329 (968)
T PLN00113 251 PIPSSLGNLKNLQYLFLYQNKLSGPIPPSIF-SLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALT 329 (968)
T ss_pred ccChhHhCCCCCCEEECcCCeeeccCchhHh-hccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHh
Confidence 9999999999999999999999988887765 799999999999999999999999999999999999999999999999
Q ss_pred CCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCCccccC
Q 001974 271 GMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIPSGIGN 350 (988)
Q Consensus 271 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 350 (988)
.+++|+.|++++|.+.+..+. .+..+++|+.|++++|++++.+|..+.... .|+.|++++|++.+.+|..+..
T Consensus 330 ~l~~L~~L~L~~n~l~~~~p~------~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~-~L~~L~l~~n~l~~~~p~~~~~ 402 (968)
T PLN00113 330 SLPRLQVLQLWSNKFSGEIPK------NLGKHNNLTVLDLSTNNLTGEIPEGLCSSG-NLFKLILFSNSLEGEIPKSLGA 402 (968)
T ss_pred cCCCCCEEECcCCCCcCcCCh------HHhCCCCCcEEECCCCeeEeeCChhHhCcC-CCCEEECcCCEecccCCHHHhC
Confidence 999999999999999765443 567889999999999999999999988865 7999999999999999999999
Q ss_pred CCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEccccccccccccccccccccceee
Q 001974 351 LVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLAILH 430 (988)
Q Consensus 351 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 430 (988)
+++|+.|++++|++++.+|..|..+++|+.|+|++|++++.+|..+..+++|+.|+|++|++.+.+|..+. .++|+.|+
T Consensus 403 ~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ 481 (968)
T PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLD 481 (968)
T ss_pred CCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-cccceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999998764 58999999
Q ss_pred cCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccCCCCcEEEecCcccc
Q 001974 431 LFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMRGNFFH 510 (988)
Q Consensus 431 l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 510 (988)
+++|++++.+|..+.+++.| +.|+|++|++++.+|..+..+++|++|+|++|.++|.+|..|+.+++|+.|+|++|+++
T Consensus 482 ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 560 (968)
T PLN00113 482 LSRNQFSGAVPRKLGSLSEL-MQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLS 560 (968)
T ss_pred CcCCccCCccChhhhhhhcc-CEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCccc
Confidence 99999999999999999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccccCccccCeeecCCCcccCcCcccccCCCCcEEeCCCCc-Cccc
Q 001974 511 GSIPSSLSSLRAVLAIDLSRNNLSGLIPKFLEDLSLEYLNLSFND-LEGE 559 (988)
Q Consensus 511 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~l~l~~N~-l~~~ 559 (988)
|.+|..+..+..|+.||+++|+++|.+|.......+....+.+|. +.|.
T Consensus 561 ~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 610 (968)
T PLN00113 561 GEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGG 610 (968)
T ss_pred ccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCC
Confidence 999999999999999999999999999987655556666677776 4443
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-47 Score=419.80 Aligned_cols=289 Identities=38% Similarity=0.691 Sum_probs=244.3
Q ss_pred hccccCHHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEee
Q 001974 649 ALQKVSYESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITS 728 (988)
Q Consensus 649 ~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 728 (988)
....|+++++..+|++|...+.||+|+||.||+|... +|+.||||++........++|.+|+.++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 5677999999999999999999999999999999996 669999998865443214669999999999999999999999
Q ss_pred cccccccCCC-ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCC
Q 001974 729 CSSIDFQGND-FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKP 807 (988)
Q Consensus 729 ~~~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 807 (988)
|.+. + +.++|||||++|+|.++++..... +++|.++.+||.++|+||+|||+.+.++||||||||
T Consensus 140 C~e~-----~~~~~LVYEym~nGsL~d~L~~~~~~---------~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKs 205 (361)
T KOG1187|consen 140 CLEG-----GEHRLLVYEYMPNGSLEDHLHGKKGE---------PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKS 205 (361)
T ss_pred EecC-----CceEEEEEEccCCCCHHHHhCCCCCC---------CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCH
Confidence 9764 4 589999999999999999876521 689999999999999999999999888999999999
Q ss_pred CCeeeCCCCcEEEeeecccccccc-cccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCcc
Q 001974 808 GNVLLDNDMIAHVGDFGLARVRQE-VSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVM 886 (988)
Q Consensus 808 ~NIll~~~~~~kL~DfG~a~~~~~-~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~ 886 (988)
+|||+|+++++||+|||+|+.... ...... ...||.+|+|||++..+..+.|+|||||||++.|++||+.|.+..
T Consensus 206 sNILLD~~~~aKlsDFGLa~~~~~~~~~~~~----~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 206 SNILLDEDFNAKLSDFGLAKLGPEGDTSVST----TVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred HHeeECCCCCEEccCccCcccCCccccceee----ecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 999999999999999999965443 111111 006999999999999999999999999999999999999998865
Q ss_pred c-cCCcchHHHHHHHHhh-hhhhhhcccccc-CcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHH
Q 001974 887 F-EGDLNLHNYARTALLD-HVIDIVDPILIN-DVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITN 963 (988)
Q Consensus 887 ~-~~~~~~~~~~~~~~~~-~~~~~~d~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 963 (988)
. .++..+..|+...+.+ .+.+++|+.+.. ..... +....+..++.+|++.+|++||+|.|
T Consensus 282 ~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~-----------------~~~~~~~~~a~~C~~~~~~~RP~m~~ 344 (361)
T KOG1187|consen 282 RPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDE-----------------KEVKKLAELALRCLRPDPKERPTMSQ 344 (361)
T ss_pred CCcccccHHHHHHHHHHCcchhheeCCCccCCCCChH-----------------HHHHHHHHHHHHHcCcCCCcCcCHHH
Confidence 5 3445588888887777 488999998763 22110 23345789999999999999999999
Q ss_pred HHHHHHHHHH
Q 001974 964 VVHELQSVKN 973 (988)
Q Consensus 964 vl~~L~~i~~ 973 (988)
|+++|+.+..
T Consensus 345 Vv~~L~~~~~ 354 (361)
T KOG1187|consen 345 VVKELEGILS 354 (361)
T ss_pred HHHHHHhhcc
Confidence 9999966543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-46 Score=379.12 Aligned_cols=253 Identities=26% Similarity=0.368 Sum_probs=208.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC-ceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND-FKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~-~~~ 741 (988)
+.+.+..||+|..|+||+++++.+++.+|+|++... +....+++.+|++++++.+||+||.+||+|.. +. ...
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~-----~~~~is 154 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS-----NGEEIS 154 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe-----CCceEE
Confidence 345678999999999999999999999999999543 34455789999999999999999999999643 35 599
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
|+||||++|+|++++...+ ++++...-+|+.++++||.|||+. .+||||||||+|||++..|++|||
T Consensus 155 I~mEYMDgGSLd~~~k~~g-----------~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKic 221 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRVG-----------RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKIC 221 (364)
T ss_pred eehhhcCCCCHHHHHhhcC-----------CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEec
Confidence 9999999999999997653 689999999999999999999963 299999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.++..... ...+++||..|||||.+.+..|+.++||||||++++|+.+|+.||....+....+.....
T Consensus 222 DFGVS~~lvnS------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~--- 292 (364)
T KOG0581|consen 222 DFGVSGILVNS------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC--- 292 (364)
T ss_pred cccccHHhhhh------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH---
Confidence 99999876554 233467999999999999999999999999999999999999998754221111111111
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhcccc-chhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKI-ECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.+++ .+.+..+. .+++++++++..|+++||.+|||++|+++.
T Consensus 293 -----~Iv~-------------------~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 293 -----AIVD-------------------EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred -----HHhc-------------------CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1111 11112233 378899999999999999999999999864
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-45 Score=396.53 Aligned_cols=262 Identities=32% Similarity=0.517 Sum_probs=212.7
Q ss_pred CCCCceeccccceeEEEEEECCCCeE-EEEEEeeccccch--hHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTI-VAIKVFNLQRHGA--SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~-vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
....+.+|+|+||+||+|.+ .|+. ||||++....... .++|.+|+.+|.+++|||||+++|+|... ....+
T Consensus 43 l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~----~~~~~ 116 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP----PGSLC 116 (362)
T ss_pred hhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC----CCceE
Confidence 34456699999999999999 5666 9999997543222 46899999999999999999999998754 12689
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCC-eEeccCCCCCeeeCCCC-cEE
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEP-VLHCDLKPGNVLLDNDM-IAH 819 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlkp~NIll~~~~-~~k 819 (988)
+||||+++|+|.++++.... ..+++..++.||.|||+||.|||+. + ||||||||+|||++.++ ++|
T Consensus 117 iVtEy~~~GsL~~~l~~~~~---------~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~K 184 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKRK---------RKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLK 184 (362)
T ss_pred EEEEeCCCCcHHHHHhhccc---------CCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEE
Confidence 99999999999999987411 4799999999999999999999998 7 99999999999999997 999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccC--CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL--GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
|+|||+++...... .......||+.|||||++. ...|+.|+||||||+++|||+||+.||...... +.+
T Consensus 185 I~DFGlsr~~~~~~----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-----~~~ 255 (362)
T KOG0192|consen 185 IADFGLSREKVISK----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-----QVA 255 (362)
T ss_pred ECCCccceeecccc----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-----HHH
Confidence 99999998665432 1112256999999999999 569999999999999999999999998754221 111
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHHhhh
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNALLE 977 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~~ 977 (988)
..... ....+..+..+++.+..+|.+||+.||+.||++.+++..|+.+......
T Consensus 256 ~~v~~--------------------------~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 256 SAVVV--------------------------GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred HHHHh--------------------------cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 11110 1111122335889999999999999999999999999999999887765
Q ss_pred hc
Q 001974 978 AW 979 (988)
Q Consensus 978 ~~ 979 (988)
..
T Consensus 310 ~~ 311 (362)
T KOG0192|consen 310 AG 311 (362)
T ss_pred cC
Confidence 33
No 6
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-45 Score=389.75 Aligned_cols=258 Identities=29% Similarity=0.501 Sum_probs=213.4
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
+.+..++.||+|.||.||.|.+. ....||+|.++.. ....++|.+|+++|++++|++||+++|+|... +.++|
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~piyI 278 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPIYI 278 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecC-----CceEE
Confidence 33456789999999999999995 4458999999754 33457899999999999999999999998753 57999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
|||||+.|+|.+|++.... ..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..+||+|
T Consensus 279 VtE~m~~GsLl~yLr~~~~---------~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsD 346 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRTREG---------GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISD 346 (468)
T ss_pred EEEecccCcHHHHhhhcCC---------CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcc
Confidence 9999999999999987322 4688899999999999999999999 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||+|+...+.. .....+..-+..|.|||.+..+.++.|||||||||+||||+| |+.||..+... +
T Consensus 347 FGLAr~~~d~~---Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-----e------ 412 (468)
T KOG0197|consen 347 FGLARLIGDDE---YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-----E------ 412 (468)
T ss_pred cccccccCCCc---eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-----H------
Confidence 99999443322 222333446789999999999999999999999999999999 99998743211 1
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
+.+.++ +......+..||+++.++|..||+.+|++|||++.+...++++...
T Consensus 413 ---v~~~le------------------~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 413 ---VLELLE------------------RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred ---HHHHHh------------------ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 111111 2223345668999999999999999999999999999999888653
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.1e-44 Score=386.55 Aligned_cols=249 Identities=24% Similarity=0.367 Sum_probs=213.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeec---cccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNL---QRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.+|...+.||+|||+.||.+++..+|+.||+|++.. ......+.+.+||++.++++|||||+++++ |++.++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 569999999999999999999988999999999964 245566789999999999999999999999 566799
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
+|||.|+|+.++|..+++..+ ++++.+++.+++||+.||.|||+. +|+|||||-.|+|++++.++|
T Consensus 93 VYivLELC~~~sL~el~Krrk-----------~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VK 158 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRK-----------PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVK 158 (592)
T ss_pred eEEEEEecCCccHHHHHHhcC-----------CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEE
Confidence 999999999999999998543 799999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||+|......... ..+..||+.|.|||++.....+..+||||+||++|-|++|++||+.. .
T Consensus 159 IgDFGLAt~le~~~Er----k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~------- 222 (592)
T KOG0575|consen 159 IGDFGLATQLEYDGER----KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----T------- 222 (592)
T ss_pred ecccceeeeecCcccc----cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----h-------
Confidence 9999999987754322 22356999999999999999999999999999999999999999731 0
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.+.. .+++......+.....+..+||.++|+.||.+|||+++|++.
T Consensus 223 -----vkety----------------~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 223 -----VKETY----------------NKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -----HHHHH----------------HHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11100 112222223344667788999999999999999999999864
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-44 Score=369.63 Aligned_cols=201 Identities=32% Similarity=0.548 Sum_probs=180.6
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
...+|+..+.||+|+||+||+|+++.++..||||.+... .....+.+..|+.+++.++|||||++++++. .++
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~-----~~~ 82 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE-----DDD 82 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-----cCC
Confidence 346799999999999999999999999999999999755 3445577899999999999999999999965 458
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC---
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND--- 815 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--- 815 (988)
..++|||||.||||.+|++..+ .+++..++.++.|||.||++||++ +||||||||.|||++..
T Consensus 83 ~i~lVMEyC~gGDLs~yi~~~~-----------~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~ 148 (429)
T KOG0595|consen 83 FIYLVMEYCNGGDLSDYIRRRG-----------RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARN 148 (429)
T ss_pred eEEEEEEeCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCC
Confidence 9999999999999999998764 689999999999999999999999 99999999999999765
Q ss_pred ---CcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 816 ---MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 816 ---~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
-.+||+|||+|+......... ...|++.|||||+++..+|+.|+|+||.|+++|++++|+.||+.
T Consensus 149 ~~~~~LKIADFGfAR~L~~~~~a~-----tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 149 DTSPVLKIADFGFARFLQPGSMAE-----TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred CCCceEEecccchhhhCCchhHHH-----HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 468999999999887544333 35699999999999999999999999999999999999999973
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-44 Score=371.50 Aligned_cols=254 Identities=26% Similarity=0.386 Sum_probs=203.4
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-------chhHHHHHHHHHHHhcCCCCceEEEeecccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-------GASKSFLAECKALKNIRHRNLVKVITSCSSIDF 734 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 734 (988)
.+.|.+.+.||+|+||.|-+|..+.+|+.||||++..... .......+|+++|++++|||||+++++ |
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~-----f 245 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF-----F 245 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee-----e
Confidence 4568889999999999999999999999999999964321 122346799999999999999999999 4
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 814 (988)
+.++..||||||++||+|.+++-.++ .+.+.....+++|++.|+.|||++ ||+||||||+|||+..
T Consensus 246 ~~~ds~YmVlE~v~GGeLfd~vv~nk-----------~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~ 311 (475)
T KOG0615|consen 246 EVPDSSYMVLEYVEGGELFDKVVANK-----------YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSN 311 (475)
T ss_pred ecCCceEEEEEEecCccHHHHHHhcc-----------ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEecc
Confidence 55688899999999999999997665 567777789999999999999999 9999999999999976
Q ss_pred C---CcEEEeeecccccccccccccceeccccccccccccCcccCCCCC---CCccchHHHHHHHHHHHhCCCCCCcccc
Q 001974 815 D---MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEV---STNGDIYSYGILLLEMVTGKKPTDVMFE 888 (988)
Q Consensus 815 ~---~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwslG~vl~elltg~~p~~~~~~ 888 (988)
+ ..+||+|||+|+......... +..||+.|.|||++.+..+ ..++|+||+||++|-+++|.+||.....
T Consensus 312 ~~e~~llKItDFGlAK~~g~~sfm~-----TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~ 386 (475)
T KOG0615|consen 312 DAEDCLLKITDFGLAKVSGEGSFMK-----TLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYT 386 (475)
T ss_pred CCcceEEEecccchhhccccceehh-----hhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccC
Confidence 5 789999999999876544333 3569999999999987543 3478999999999999999999975433
Q ss_pred CCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 889 GDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
... . .+++. ...+...+..| .++.++..++|.+||..||++|||++|+++.
T Consensus 387 ~~s-l--------~eQI~---~G~y~f~p~~w----------------~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 387 DPS-L--------KEQIL---KGRYAFGPLQW----------------DRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred Ccc-H--------HHHHh---cCcccccChhh----------------hhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 211 1 11110 01111111122 2567788999999999999999999998864
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-45 Score=355.33 Aligned_cols=261 Identities=25% Similarity=0.339 Sum_probs=207.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.+|++.++||+|+||+||+++...+|..||.|.++.. +....++...|+.++++++|||||+++++.. .++....
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~evl 95 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNEVL 95 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccchhh
Confidence 4578889999999999999999999999999998733 3344567899999999999999999998532 2233448
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCC--eEeccCCCCCeeeCCCCcE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEP--VLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~ 818 (988)
.||||||.+|+|...++..+.. .+.+++..+|+++.|++.||.++|++- ++ |+||||||.||+++.+|.+
T Consensus 96 nivmE~c~~GDLsqmIk~~K~q-------kr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvv 167 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQ-------KRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVV 167 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhc-------cccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCce
Confidence 9999999999999998765432 257999999999999999999999942 24 8999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
||+|||+++.+..... .....+|||.||+||.+.+.+|+.+|||||+||++|||+.-++||... ++.....
T Consensus 168 KLGDfGL~r~l~s~~t----fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~ 238 (375)
T KOG0591|consen 168 KLGDFGLGRFLSSKTT----FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCK 238 (375)
T ss_pred eeccchhHhHhcchhH----HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHH
Confidence 9999999998766433 334568999999999999999999999999999999999999998631 2222221
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccc-cchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGK-IECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
+... .+... .+ .-++..+..||..|+..||+.||+.-.++..+..
T Consensus 239 KI~q------------gd~~~---------------~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 239 KIEQ------------GDYPP---------------LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHHc------------CCCCC---------------CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 1110 01100 01 1356678999999999999999996555554443
No 11
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2e-47 Score=388.72 Aligned_cols=475 Identities=25% Similarity=0.349 Sum_probs=366.9
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecC
Q 001974 33 RVTVLNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLG 112 (988)
Q Consensus 33 ~v~~l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (988)
..+.+++++|.++ .+.+.+.++..|.+|++++|++. ..|.+++++.+++.|+.++|.+. ++|..++.+.+|+.|+.+
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 3577889999988 67778889999999999999998 78889999999999999999999 899999999999999999
Q ss_pred cccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCcc
Q 001974 113 RNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGII 192 (988)
Q Consensus 113 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 192 (988)
+|.+. ..|..++.+..|+.|+..+|+++ ..|..+..+.+|..|++.+|+++...|+.+. ++.|++||...|-++ .+
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tl 198 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TL 198 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cC
Confidence 99998 88888999999999999999998 6788888999999999999999955554444 999999999999998 78
Q ss_pred chhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccccCC
Q 001974 193 PPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFGGM 272 (988)
Q Consensus 193 ~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~l 272 (988)
|..++++.+|..|+|.+|+|. ++| -|.++..|+.|+++.|+|+-...+..+++.++.+||+.+|++. ..|+.+.-+
T Consensus 199 P~~lg~l~~L~~LyL~~Nki~-~lP--ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clL 274 (565)
T KOG0472|consen 199 PPELGGLESLELLYLRRNKIR-FLP--EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLL 274 (565)
T ss_pred ChhhcchhhhHHHHhhhcccc-cCC--CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchHHHHh
Confidence 889999999999999999998 888 3457888999999999998443344568999999999999998 456678888
Q ss_pred ccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhh-----hccccccE----EEccCCcc---
Q 001974 273 KNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIA-----NLSDQLQN----LIMTSNQL--- 340 (988)
Q Consensus 273 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-----~~~~~L~~----L~L~~N~l--- 340 (988)
++|.+||+|+|.|++.+. +++++ +|+.|.+.+|.++ .+-..+. ...+.|+. =-++.-+-
T Consensus 275 rsL~rLDlSNN~is~Lp~-------sLgnl-hL~~L~leGNPlr-TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e 345 (565)
T KOG0472|consen 275 RSLERLDLSNNDISSLPY-------SLGNL-HLKFLALEGNPLR-TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTE 345 (565)
T ss_pred hhhhhhcccCCccccCCc-------ccccc-eeeehhhcCCchH-HHHHHHHcccHHHHHHHHHHhhccCCCCCCccccc
Confidence 999999999999987654 57788 8999999999886 3222221 11112221 01111100
Q ss_pred -----ccCCCccccCCCcceEEEeeCccCCCccCcccCCCCc---cCeEecccccCCCCCCCCCCCCCCCC-EEEccccc
Q 001974 341 -----HGSIPSGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQN---LEGMGLYDNQLSGEIPSSLGNLSILS-ELLLNNNS 411 (988)
Q Consensus 341 -----~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~ 411 (988)
..........+.+.+.|++++-+++ .+|+....... ....+++.|++. ++|..+..+..+. .+.+++|.
T Consensus 346 ~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~ 423 (565)
T KOG0472|consen 346 TAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNK 423 (565)
T ss_pred ccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCc
Confidence 0011122344567788888888887 66665433322 677888888887 7777777776654 34455555
Q ss_pred cccccccccccccccceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCc
Q 001974 412 LSGVIPSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPS 491 (988)
Q Consensus 412 l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 491 (988)
++ .+|..++.+++|..|+|++|-+. .+|.+++.+..+ +.||+|+|+|. .+|..+..+..|+.+-.++|++...-|+
T Consensus 424 is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~L-q~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~ 499 (565)
T KOG0472|consen 424 IS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRL-QTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPS 499 (565)
T ss_pred cc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhh-heecccccccc-cchHHHhhHHHHHHHHhccccccccChH
Confidence 54 77888888888888888888887 788888888776 78888888887 7787777777777777777888744444
Q ss_pred ccccCCCCcEEEecCccccccCCccccCccccCeeecCCCccc
Q 001974 492 QLGLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLS 534 (988)
Q Consensus 492 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 534 (988)
.+.+|.+|..|||.+|.+. .+|..+++|.+|+.|+|++|.|.
T Consensus 500 ~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 500 GLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 4778888888888888887 77778888888888888888777
No 12
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.4e-43 Score=395.39 Aligned_cols=270 Identities=25% Similarity=0.435 Sum_probs=219.6
Q ss_pred hCCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
..+....+.||+|+||+||+|+.. ++...||||.++..... ..++|++|++++..++|||||+++|+|...
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~--- 561 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG--- 561 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC---
Confidence 345566789999999999999874 23467999999877665 678999999999999999999999998754
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhH----hhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCee
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIE----IQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVL 811 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 811 (988)
+..++|+|||..|||.+|++....... .... ..+++..+.+.||.|||.||+||-++ .+|||||..+|+|
T Consensus 562 --~P~~MvFEYm~~GDL~eFLra~sP~a~-~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCL 635 (774)
T KOG1026|consen 562 --DPLCMVFEYMDHGDLHEFLRARSPKAD-KLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCL 635 (774)
T ss_pred --CeeEEEEEecccccHHHHHHhhCCccc-cccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhce
Confidence 889999999999999999986543211 1111 24599999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCC
Q 001974 812 LDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGD 890 (988)
Q Consensus 812 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~ 890 (988)
|.++..|||+|||+++..-..+.+.. .....-+.+|||||.+..++||++||||||||+|||+++ |+.||......
T Consensus 636 Vge~l~VKIsDfGLsRdiYssDYYk~--~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~- 712 (774)
T KOG1026|consen 636 VGENLVVKISDFGLSRDIYSSDYYKV--RGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ- 712 (774)
T ss_pred eccceEEEecccccchhhhhhhhhcc--cCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH-
Confidence 99999999999999996544332221 112335789999999999999999999999999999999 99998643222
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
++.+.+. .....+.+..||.++++||..||+..|++||+++||-.+|++
T Consensus 713 -------------EVIe~i~------------------~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~ 761 (774)
T KOG1026|consen 713 -------------EVIECIR------------------AGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQA 761 (774)
T ss_pred -------------HHHHHHH------------------cCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHH
Confidence 1111110 111245667899999999999999999999999999999998
Q ss_pred HHHH
Q 001974 971 VKNA 974 (988)
Q Consensus 971 i~~~ 974 (988)
..++
T Consensus 762 ~~~~ 765 (774)
T KOG1026|consen 762 WAQA 765 (774)
T ss_pred HHhc
Confidence 7654
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-43 Score=357.04 Aligned_cols=243 Identities=29% Similarity=0.401 Sum_probs=203.8
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
..++|++.++||+|+||+||+++.+.+++.+|+|++++.. ....+...+|..++.+++||+||+++.. |+++
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccC
Confidence 4578999999999999999999999999999999997442 2345678899999999999999999987 6778
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..|+|+||+.||.|..++.+.+ .+++..++-++.+|+.||.|||++ +||||||||+|||+|++|+
T Consensus 98 ~kLylVld~~~GGeLf~hL~~eg-----------~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GH 163 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQREG-----------RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGH 163 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhcC-----------CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCc
Confidence 99999999999999999998764 689999999999999999999999 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
++|+|||+++..-..... +.++.||+.|||||++.+..|+.++|.||+|+++|||++|.+||... +...+.
T Consensus 164 i~LtDFgL~k~~~~~~~~----t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-----~~~~~~ 234 (357)
T KOG0598|consen 164 IKLTDFGLCKEDLKDGDA----TRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-----DVKKMY 234 (357)
T ss_pred EEEeccccchhcccCCCc----cccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-----cHHHHH
Confidence 999999999854443222 23367999999999999999999999999999999999999998632 111111
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccc-hhHHHHHHhhcccCcCCCCCC
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIE-CPISMVRIGVACSVESPQDRM 959 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RP 959 (988)
...... +...+.. .+.+..+++.++++.||++|.
T Consensus 235 ~~I~~~----------------------------k~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 235 DKILKG----------------------------KLPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred HHHhcC----------------------------cCCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 111111 1111222 566789999999999999995
No 14
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=388.87 Aligned_cols=259 Identities=25% Similarity=0.476 Sum_probs=218.0
Q ss_pred CCCCCceeccccceeEEEEEECCCC---eEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDG---TIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
...+.++||.|.||.||+|+.+..| ..||||.++.... ....+|+.|+.||.+++||||+++.|+... ...
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTk-----s~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTK-----SKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEec-----Cce
Confidence 3467789999999999999997666 4699999986544 445789999999999999999999999654 488
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.+||+|||++|+|+.|++.+. .++++.+...+.++||.||.||.++ ++|||||.++|||++.+..+|
T Consensus 705 vMIiTEyMENGsLDsFLR~~D----------GqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCK 771 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQND----------GQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCK 771 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcC----------CceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEE
Confidence 999999999999999999876 3689999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (988)
++|||+++.+++.... .....+-.-+.+|.|||.+..++++.+|||||||+|+||.++ |..||-.+...+
T Consensus 772 VsDFGLSRvledd~~~-~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd-------- 842 (996)
T KOG0196|consen 772 VSDFGLSRVLEDDPEA-AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------- 842 (996)
T ss_pred eccccceeecccCCCc-cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH--------
Confidence 9999999988665532 222333445789999999999999999999999999999988 999975432210
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
+... .-+.-.+..+++||..+.+||..||++|-.+||.+++|+..|+++-.
T Consensus 843 ------VIka------------------Ie~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 843 ------VIKA------------------IEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ------HHHH------------------HHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 1000 01122345678999999999999999999999999999999999854
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4e-43 Score=345.47 Aligned_cols=270 Identities=24% Similarity=0.334 Sum_probs=204.4
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
+.|+...++|+|+||+||+++++.+|+.||||.+... ++...+-.++|++++++++|+|+|.++++|. .....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFr-----rkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFR-----RKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHH-----hccee
Confidence 4688889999999999999999999999999999633 2334467899999999999999999999955 45889
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++|+|||+..-|. -+.... ..++...+.+++.|++.|+.|+|++ ++|||||||+|||++.+|.+||
T Consensus 77 hLVFE~~dhTvL~-eLe~~p----------~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKL 142 (396)
T KOG0593|consen 77 HLVFEYCDHTVLH-ELERYP----------NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKL 142 (396)
T ss_pred EEEeeecchHHHH-HHHhcc----------CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEe
Confidence 9999999654444 444333 3678889999999999999999999 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
||||+|+........ .+..+.|.+|+|||.+.+ .+|+..+||||.||++.||++|.+.|... .|.+....++.
T Consensus 143 CDFGFAR~L~~pgd~----YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~--SDiDQLy~I~k 216 (396)
T KOG0593|consen 143 CDFGFARTLSAPGDN----YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR--SDIDQLYLIRK 216 (396)
T ss_pred ccchhhHhhcCCcch----hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc--chHHHHHHHHH
Confidence 999999988743221 223568999999999888 78999999999999999999999987632 22222222233
Q ss_pred HHhhh---hhhhhcc--cc----ccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDH---VIDIVDP--IL----INDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~---~~~~~d~--~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.+.+- -..++.. .+ .+.+++ ..+.....+....-+.++++.|++.||++|++.+|++.
T Consensus 217 tLG~L~prhq~iF~~N~~F~Gv~lP~~~~---------~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 217 TLGNLIPRHQSIFSSNPFFHGVRLPEPEH---------PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHcccCHHHHHHhccCCceeeeecCCCCC---------ccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 22221 1111111 11 011111 00111112244456889999999999999999999874
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=366.00 Aligned_cols=257 Identities=25% Similarity=0.378 Sum_probs=215.3
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhc-CCCCceEEEeecccccc
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDF 734 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 734 (988)
.+...+|...+.||+|+|++|++|+.+.+++.||||++.+. +....+.+..|-.+|.+| .||.|++++.. |
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----F 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----F 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----e
Confidence 34557799999999999999999999999999999998633 233446678899999999 89999999987 6
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 814 (988)
++...+|+|+||+++|+|.++|++.+ .+++..++.++.+|+.||+|||++ |||||||||+|||+|+
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~G-----------sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~ 209 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKYG-----------SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDK 209 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHhC-----------cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcC
Confidence 77799999999999999999998764 689999999999999999999999 9999999999999999
Q ss_pred CCcEEEeeecccccccccccc---------cceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 815 DMIAHVGDFGLARVRQEVSNL---------TQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 815 ~~~~kL~DfG~a~~~~~~~~~---------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
+|++||+|||.|+.+.+.... .......++||..|.+||++.....++.+|+|||||++|.|+.|++||..
T Consensus 210 dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra 289 (604)
T KOG0592|consen 210 DGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA 289 (604)
T ss_pred CCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc
Confidence 999999999999987654322 11111457899999999999999999999999999999999999999874
Q ss_pred cccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 886 MFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
..+ + .+. +++.......+...|+.+.+|+.+.|..||.+|+|+++|.
T Consensus 290 ~Ne----y------liF-----------------------qkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk 336 (604)
T KOG0592|consen 290 ANE----Y------LIF-----------------------QKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIK 336 (604)
T ss_pred ccH----H------HHH-----------------------HHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHh
Confidence 211 1 111 1222223344557788899999999999999999998887
Q ss_pred HH
Q 001974 966 HE 967 (988)
Q Consensus 966 ~~ 967 (988)
+.
T Consensus 337 ~H 338 (604)
T KOG0592|consen 337 AH 338 (604)
T ss_pred hC
Confidence 64
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-43 Score=374.48 Aligned_cols=270 Identities=29% Similarity=0.473 Sum_probs=213.5
Q ss_pred CHHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeeccc
Q 001974 654 SYESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSS 731 (988)
Q Consensus 654 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 731 (988)
+.++++...+.+.+.+.||+|+||+||+|.|- | .||||++..... +..+.|++|+..+++-+|.||+-+.|||..
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccc--c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 33555556666778899999999999999995 3 499999986543 345789999999999999999999999865
Q ss_pred ccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCee
Q 001974 732 IDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVL 811 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 811 (988)
. ...||+.+|+|-+|+.+++... .++...+.+.||+|||+||.|||.+ +|||||||..||+
T Consensus 460 p------~~AIiTqwCeGsSLY~hlHv~e----------tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIF 520 (678)
T KOG0193|consen 460 P------PLAIITQWCEGSSLYTHLHVQE----------TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIF 520 (678)
T ss_pred C------ceeeeehhccCchhhhhccchh----------hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceE
Confidence 3 3499999999999999998665 4789999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEeeecccccccccccccceeccccccccccccCcccCC---CCCCCccchHHHHHHHHHHHhCCCCCCcccc
Q 001974 812 LDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG---SEVSTNGDIYSYGILLLEMVTGKKPTDVMFE 888 (988)
Q Consensus 812 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~~~~~ 888 (988)
+.++++|||+|||++......... .......|...|||||++.. .+|++++||||||+|+|||+||..||.. ..
T Consensus 521 l~~~~kVkIgDFGLatvk~~w~g~--~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~ 597 (678)
T KOG0193|consen 521 LHEDLKVKIGDFGLATVKTRWSGE--QQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QN 597 (678)
T ss_pred EccCCcEEEecccceeeeeeeccc--cccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CC
Confidence 999999999999999864433111 11122347889999999875 4799999999999999999999999972 22
Q ss_pred CCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 889 GDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
.+..+-..-+. .+..+. ......|+.++.+|+..||..+|++||.+.+|+..|
T Consensus 598 ~dqIifmVGrG------------~l~pd~---------------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l 650 (678)
T KOG0193|consen 598 RDQIIFMVGRG------------YLMPDL---------------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKL 650 (678)
T ss_pred hhheEEEeccc------------ccCccc---------------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHH
Confidence 21111000000 000010 011237889999999999999999999999999999
Q ss_pred HHHHHHh
Q 001974 969 QSVKNAL 975 (988)
Q Consensus 969 ~~i~~~~ 975 (988)
+++....
T Consensus 651 ~~l~~~~ 657 (678)
T KOG0193|consen 651 EELLPSL 657 (678)
T ss_pred HHhhhcc
Confidence 9887653
No 18
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.7e-46 Score=379.55 Aligned_cols=459 Identities=27% Similarity=0.389 Sum_probs=388.2
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeec
Q 001974 32 RRVTVLNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFL 111 (988)
Q Consensus 32 ~~v~~l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (988)
.-.+++++++|+++ ..|++++.+..++.|+.++|++. ++|+.++.+.+|..|+++.|.+. ..|+.++.+-.|..|+.
T Consensus 68 ~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~ 144 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDA 144 (565)
T ss_pred cceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhc
Confidence 46789999999999 88999999999999999999999 89999999999999999999999 99999999999999999
Q ss_pred CcccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCc
Q 001974 112 GRNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGI 191 (988)
Q Consensus 112 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 191 (988)
.+|+|+ ..|+.+..+.+|..|++.+|+++. .|...-+++.|++||...|-++ .+|..++++.+|+.|+|.+|+|. .
T Consensus 145 ~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~ 220 (565)
T KOG0472|consen 145 TNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-F 220 (565)
T ss_pred cccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-c
Confidence 999998 899999999999999999999995 4444555999999999999998 78889999999999999999999 6
Q ss_pred cchhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccccC
Q 001974 192 IPPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFGG 271 (988)
Q Consensus 192 ~~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~ 271 (988)
.| +|.+++.|++|+++.|+|. .+|...+.++++|..|||++|+++ ..|+.+.-+.+|++||+++|.|++ .|..+++
T Consensus 221 lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sLgn 296 (565)
T KOG0472|consen 221 LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSLGN 296 (565)
T ss_pred CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCccccc
Confidence 67 9999999999999999999 999999999999999999999999 789999999999999999999995 5666999
Q ss_pred CccccEEecccccCCCCCCCchhhhcccccCCCCcE----EEeecc---c-CCCCCCch-hh--hccccccEEEccCCcc
Q 001974 272 MKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRT----LIFAAN---K-LRGALPHS-IA--NLSDQLQNLIMTSNQL 340 (988)
Q Consensus 272 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~----L~Ls~N---~-l~~~~p~~-~~--~~~~~L~~L~L~~N~l 340 (988)
+ .|+.|.+.+|.+.++..+-..... -.-++.|+. =-++.- . -.+..|.+ +. ...-+.+.|+++.-++
T Consensus 297 l-hL~~L~leGNPlrTiRr~ii~~gT-~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~ql 374 (565)
T KOG0472|consen 297 L-HLKFLALEGNPLRTIRREIISKGT-QEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQL 374 (565)
T ss_pred c-eeeehhhcCCchHHHHHHHHcccH-HHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhccccccc
Confidence 9 999999999998755432111000 000011111 000000 0 00111111 11 1112578888998888
Q ss_pred ccCCCccccCCCc---ceEEEeeCccCCCccCcccCCCCccC-eEecccccCCCCCCCCCCCCCCCCEEEcccccccccc
Q 001974 341 HGSIPSGIGNLVG---LYRLGMGGNQFTGTIPKEMGKLQNLE-GMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVI 416 (988)
Q Consensus 341 ~~~~~~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 416 (988)
+ .+|+..+.-.+ .+..+++.|++. ++|..+..+..+. .+.+++|.++ .+|..++.+++|..|+|++|-+. .+
T Consensus 375 t-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~L 450 (565)
T KOG0472|consen 375 T-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DL 450 (565)
T ss_pred c-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hc
Confidence 8 67777666555 889999999999 8898888887664 5666677766 88888999999999999999998 78
Q ss_pred ccccccccccceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccC
Q 001974 417 PSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLC 496 (988)
Q Consensus 417 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 496 (988)
|..++.+..|+.|+++.|+|. .+|+++..+..+ +.+-.++|++...-|+.+.++.+|+.|||.+|.+. .+|+.+++|
T Consensus 451 P~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~l-Etllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~Lgnm 527 (565)
T KOG0472|consen 451 PEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTL-ETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNM 527 (565)
T ss_pred chhhhhhhhhheecccccccc-cchHHHhhHHHH-HHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccc
Confidence 999999999999999999998 999999888887 88888889998555666999999999999999999 899999999
Q ss_pred CCCcEEEecCcccc
Q 001974 497 SYLEEIYMRGNFFH 510 (988)
Q Consensus 497 ~~L~~L~L~~N~l~ 510 (988)
.+|++|+|++|.|.
T Consensus 528 tnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 528 TNLRHLELDGNPFR 541 (565)
T ss_pred cceeEEEecCCccC
Confidence 99999999999999
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-42 Score=362.63 Aligned_cols=270 Identities=22% Similarity=0.310 Sum_probs=212.1
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhH-HHHHHHHHHHhcC-CCCceEEEeecccccccCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASK-SFLAECKALKNIR-HRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 739 (988)
.++|.++++||.|.||.||+|+.+.+|+.||||.++..-....+ .-.+|+..++++. ||||+++.+++.+. +..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~----~~~ 84 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDN----DRI 84 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhcc----Cce
Confidence 46789999999999999999999999999999999754433322 3468999999997 99999999996543 238
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||| ..+|++.++... +.+++.++..|+.||++||+|+|.+ |+.|||+||+|||+.....+|
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~----------r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iK 150 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRN----------RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIK 150 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcC----------CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeE
Confidence 99999999 789999998774 4899999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||+||.......++. .+.|.+|+|||++.. +-|+.+.||||+|||++|+.+-++.|....+-|
T Consensus 151 iaDFGLARev~SkpPYTe-----YVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-------- 217 (538)
T KOG0661|consen 151 IADFGLAREVRSKPPYTE-----YVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-------- 217 (538)
T ss_pred ecccccccccccCCCcch-----hhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH--------
Confidence 999999998877665554 468999999998654 678999999999999999999999876432221
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHH--HHhhhhhc--------cccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQ--RLRQAKIN--------GKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~--~~~~~~~~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
++..+.+-...++...|.....- .+....+. -...++.+..++|.+|+++||.+||||+|.++.
T Consensus 218 -----qi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 218 -----QIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred -----HHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 12222222222333333331110 00000000 013477889999999999999999999999875
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=356.09 Aligned_cols=262 Identities=27% Similarity=0.378 Sum_probs=207.2
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
.++...+.||+|+||+||++...++|+..|||.+...+....+.+.+|+.+|++++|||||+++|..... +. ..+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~--~~-~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSR--EN-DEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccc--cC-eeeEe
Confidence 4577789999999999999999988999999998765433357789999999999999999999974322 11 36899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-CCcEEEe
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN-DMIAHVG 821 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~ 821 (988)
.|||+++|+|.+++...+. ++++..++.+++||++||+|||++ |||||||||+|||++. ++.+||+
T Consensus 94 ~mEy~~~GsL~~~~~~~g~----------~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~Kla 160 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG----------KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLA 160 (313)
T ss_pred eeeccCCCcHHHHHHHcCC----------CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEec
Confidence 9999999999999987652 589999999999999999999998 9999999999999999 7999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||+++..... ...........||+.|||||++..+ ....++||||+||++.||+||++||..... ...+.-..
T Consensus 161 DFG~a~~~~~~-~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~----~~~~~~~i 235 (313)
T KOG0198|consen 161 DFGLAKKLESK-GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE----EAEALLLI 235 (313)
T ss_pred cCccccccccc-cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc----hHHHHHHH
Confidence 99999876641 1111223346799999999999963 344599999999999999999999874300 00100000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
... ...+..+...+.+..+++.+|++.||++||||+++++.-...
T Consensus 236 g~~--------------------------~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 236 GRE--------------------------DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred hcc--------------------------CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 000 001122345777899999999999999999999999875443
No 21
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-43 Score=369.66 Aligned_cols=392 Identities=20% Similarity=0.235 Sum_probs=305.2
Q ss_pred cEEEEEcCCCCCcccccccccCC--CCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceee
Q 001974 33 RVTVLNLRSKGLSGSLSPYIGNL--SFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILF 110 (988)
Q Consensus 33 ~v~~l~l~~~~~~~~~~~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (988)
....||+++++++..--..+..+ +.-+.|||++|+|..+-+..|.++++|+.+++.+|.++ .+|.......+|+.|+
T Consensus 53 ~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 53 NTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLD 131 (873)
T ss_pred CceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEe
Confidence 44566777777664322333322 23467999999999888888999999999999999999 8898777788899999
Q ss_pred cCcccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccC
Q 001974 111 LGRNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSG 190 (988)
Q Consensus 111 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 190 (988)
|.+|.|+.+-..++.-++.|+.|||+.|.|+.+.-..|..-.++++|+|++|+|+......|..+.+|..|.|+.|+|+.
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNritt 211 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITT 211 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccc
Confidence 99999998888888899999999999999986666678887889999999999998888889999999999999999997
Q ss_pred ccchhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCccccccc
Q 001974 191 IIPPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFG 270 (988)
Q Consensus 191 ~~~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~ 270 (988)
..+.+|++|++|+.|+|..|+|. .+....|.++++|+.|.|..|.+...--..|-.+.+++.|+|+.|+++.+...++.
T Consensus 212 Lp~r~Fk~L~~L~~LdLnrN~ir-ive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lf 290 (873)
T KOG4194|consen 212 LPQRSFKRLPKLESLDLNRNRIR-IVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLF 290 (873)
T ss_pred cCHHHhhhcchhhhhhcccccee-eehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccccc
Confidence 77788888999999999999887 66667788888888888888888876667777888888888888888888788888
Q ss_pred CCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCCccccC
Q 001974 271 GMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIPSGIGN 350 (988)
Q Consensus 271 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 350 (988)
+++.|+.|+||+|.|..+..+.. +-+++|++|+|+.|+|+..-+..+..+ .+|++|.|++|.+...-...|..
T Consensus 291 gLt~L~~L~lS~NaI~rih~d~W------sftqkL~~LdLs~N~i~~l~~~sf~~L-~~Le~LnLs~Nsi~~l~e~af~~ 363 (873)
T KOG4194|consen 291 GLTSLEQLDLSYNAIQRIHIDSW------SFTQKLKELDLSSNRITRLDEGSFRVL-SQLEELNLSHNSIDHLAEGAFVG 363 (873)
T ss_pred ccchhhhhccchhhhheeecchh------hhcccceeEeccccccccCChhHHHHH-HHhhhhcccccchHHHHhhHHHH
Confidence 88888888888888877766633 345677777888777774444444444 36777777777777666667777
Q ss_pred CCcceEEEeeCccCCCccCc---ccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEccccccccccccccccccccc
Q 001974 351 LVGLYRLGMGGNQFTGTIPK---EMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLA 427 (988)
Q Consensus 351 l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 427 (988)
+.+|+.|||++|.|+..+.+ .|.+|++|+.|+|.+|+|..+.-.+|.++..|++|+|.+|.|..+-|.+|..+ .|+
T Consensus 364 lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk 442 (873)
T KOG4194|consen 364 LSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELK 442 (873)
T ss_pred hhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhh
Confidence 77777777777777755443 46677777777777777775555677777777777777777777777777777 677
Q ss_pred eeecCCC
Q 001974 428 ILHLFEN 434 (988)
Q Consensus 428 ~L~l~~N 434 (988)
+|.++.-
T Consensus 443 ~Lv~nSs 449 (873)
T KOG4194|consen 443 ELVMNSS 449 (873)
T ss_pred hhhhccc
Confidence 7766543
No 22
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-43 Score=370.24 Aligned_cols=386 Identities=23% Similarity=0.243 Sum_probs=353.7
Q ss_pred CCCCCceeeeeEEeCC--------------CCcEEEEEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccCCCC
Q 001974 15 DSGHFCEWKGITCGLR--------------HRRVTVLNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLF 80 (988)
Q Consensus 15 ~~~~~c~~~~v~c~~~--------------~~~v~~l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 80 (988)
+.++.|.-+-.+|+.. +..+..||+++|++..+-+..|.++++|++++|..|.++ .+|...+...
T Consensus 47 pa~c~c~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sg 125 (873)
T KOG4194|consen 47 PATCPCNTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESG 125 (873)
T ss_pred CCcCCCCceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccccccc
Confidence 5677788888899852 357888999999999899999999999999999999999 8998888888
Q ss_pred CCcEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeecc
Q 001974 81 RLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLA 160 (988)
Q Consensus 81 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 160 (988)
+|+.|+|.+|.|+..-..+++.++.|+.||||.|.|+.+.-..|..-.++++|+|++|+|+....+.|.++.+|..|.|+
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLs 205 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLS 205 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecc
Confidence 99999999999998888899999999999999999997777788888999999999999998889999999999999999
Q ss_pred ccccCCCCCccccCcccccccccccccccCccchhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccc
Q 001974 161 ANAFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGS 240 (988)
Q Consensus 161 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~ 240 (988)
.|+++..++.+|.+|++|+.|+|..|+|.-+.--+|.+|++|+.|.|..|.|. .+.+++|.++.+++.|+|+.|+++..
T Consensus 206 rNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~-kL~DG~Fy~l~kme~l~L~~N~l~~v 284 (873)
T KOG4194|consen 206 RNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDIS-KLDDGAFYGLEKMEHLNLETNRLQAV 284 (873)
T ss_pred cCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcc-cccCcceeeecccceeecccchhhhh
Confidence 99999888899999999999999999999555789999999999999999999 99999999999999999999999988
Q ss_pred cCcccccCCcccEEEeccccccCcccccccCCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCC
Q 001974 241 IPISLSNASKLEFIEALDNSFSGKLSVNFGGMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALP 320 (988)
Q Consensus 241 ~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 320 (988)
-..++-+++.|+.|++|+|.|..+.+....-.++|+.|+|++|+|+...+. +|..+..|++|.|++|.++ .+.
T Consensus 285 n~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~------sf~~L~~Le~LnLs~Nsi~-~l~ 357 (873)
T KOG4194|consen 285 NEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEG------SFRVLSQLEELNLSHNSID-HLA 357 (873)
T ss_pred hcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChh------HHHHHHHhhhhcccccchH-HHH
Confidence 889999999999999999999999999999999999999999999998877 6778899999999999999 566
Q ss_pred chhhhccccccEEEccCCccccCCCc---cccCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCC
Q 001974 321 HSIANLSDQLQNLIMTSNQLHGSIPS---GIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLG 397 (988)
Q Consensus 321 ~~~~~~~~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 397 (988)
+..+...++|++|||++|.|...+.+ .|..|++|+.|+|.+|+|..+.-.+|.++.+|+.|||.+|-|-.+-|.+|.
T Consensus 358 e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe 437 (873)
T KOG4194|consen 358 EGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFE 437 (873)
T ss_pred hhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccc
Confidence 65555566899999999999876654 577899999999999999966667999999999999999999999999999
Q ss_pred CCCCCCEEEcccc
Q 001974 398 NLSILSELLLNNN 410 (988)
Q Consensus 398 ~l~~L~~L~L~~N 410 (988)
.+ .|++|.+..-
T Consensus 438 ~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 438 PM-ELKELVMNSS 449 (873)
T ss_pred cc-hhhhhhhccc
Confidence 99 8999877543
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.4e-41 Score=326.00 Aligned_cols=269 Identities=23% Similarity=0.376 Sum_probs=211.1
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|...+++|+|.||.||+|++.++|+.||||.++... ++......+|++.++.++|+||+.++++ |...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCCce
Confidence 46888999999999999999999999999999997442 3345678999999999999999999999 5566889
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
.+|+||| ..+|...++... ..++..++..++.++++|++|+|++ .|+||||||.|+|++++|.+||
T Consensus 77 ~lVfEfm-~tdLe~vIkd~~----------i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKi 142 (318)
T KOG0659|consen 77 SLVFEFM-PTDLEVVIKDKN----------IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKI 142 (318)
T ss_pred EEEEEec-cccHHHHhcccc----------cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEe
Confidence 9999999 679999998766 3789999999999999999999999 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||+|+.+......... .+-|..|+|||.+.+ ..|+..+||||.||++.||+-|.+-|. ++.++.+....
T Consensus 143 ADFGLAr~f~~p~~~~~~----~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fp----G~sDidQL~~I 214 (318)
T KOG0659|consen 143 ADFGLARFFGSPNRIQTH----QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFP----GDSDIDQLSKI 214 (318)
T ss_pred ecccchhccCCCCccccc----ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCC----CCchHHHHHHH
Confidence 999999987765433222 367999999999887 578999999999999999999987754 33333333221
Q ss_pred HHhhhhhhhhccccccCcchhhhhhH------HH-Hhhhhhc-cccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNK------QR-LRQAKIN-GKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~------~~-~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.-...+..+.|+.... .. .+.+... .-..+.....+++.+|+.+||.+|+|++|++++
T Consensus 215 ---------f~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 215 ---------FRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ---------HHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11112222222321111 00 1111111 123455667999999999999999999999864
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-41 Score=357.39 Aligned_cols=272 Identities=26% Similarity=0.356 Sum_probs=211.1
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.+.|+.+++||+|.||.||+|++..+|+.||+|.++.+. .+......+||.+|+++.||||+++.+..... ....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCce
Confidence 345777899999999999999999999999999997554 55567889999999999999999999987653 3478
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
+|+|+||| .-||.-++..... .+++.++..+++|++.||+|+|++ +|+|||||.+|||||.+|.+|
T Consensus 193 iYlVFeYM-dhDL~GLl~~p~v----------kft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LK 258 (560)
T KOG0600|consen 193 IYLVFEYM-DHDLSGLLSSPGV----------KFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLK 258 (560)
T ss_pred EEEEEecc-cchhhhhhcCCCc----------ccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEE
Confidence 99999999 5688888876553 799999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||+|+++....... .+..+.|.+|+|||.+.+. .|+.++|+||.|||+.||++|++.|+.. .++.+.
T Consensus 259 iaDFGLAr~y~~~~~~~---~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~----tEveQl-- 329 (560)
T KOG0600|consen 259 IADFGLARFYTPSGSAP---YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR----TEVEQL-- 329 (560)
T ss_pred eccccceeeccCCCCcc---cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc----cHHHHH--
Confidence 99999999776654322 2345689999999998885 7999999999999999999999997632 111111
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhH---------HHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNK---------QRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..++.-+.......|....- ...+....+.....+....+|+..+|..||.+|.||.++++
T Consensus 330 -------~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 330 -------HKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred -------HHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11111111112222220000 00011111113356778899999999999999999999875
No 25
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=345.01 Aligned_cols=267 Identities=24% Similarity=0.320 Sum_probs=209.3
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccch-hHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA-SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
..+.|+..+.||.|..++||+|+....++.||||++..++... .+.+.+|+..|+.++||||++++.. |..+..
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~s-----Fvv~~~ 98 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCS-----FVVDSE 98 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEE-----EEecce
Confidence 3567999999999999999999999999999999998654433 4789999999999999999999988 445689
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.|+||.||.+|++.+.++.... ..+.+..+..|.+++++||.|||.+ |.||||||+.||||+++|.+|
T Consensus 99 LWvVmpfMa~GS~ldIik~~~~---------~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~Vk 166 (516)
T KOG0582|consen 99 LWVVMPFMAGGSLLDIIKTYYP---------DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVK 166 (516)
T ss_pred eEEeehhhcCCcHHHHHHHHcc---------ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEE
Confidence 9999999999999999976543 3588999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC--CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG--SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
|+|||.+.................+||+.|||||+++. ..|+.|+||||||++..|+.+|..||...-+. +..
T Consensus 167 LadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-----kvL 241 (516)
T KOG0582|consen 167 LADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-----KVL 241 (516)
T ss_pred EcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-----HHH
Confidence 99999887554433222222256789999999999544 57999999999999999999999998743211 111
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
...+........ .-.. +. .........+.+++..|+++||++||||+++++.
T Consensus 242 l~tLqn~pp~~~--t~~~---~~-------------d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 242 LLTLQNDPPTLL--TSGL---DK-------------DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred HHHhcCCCCCcc--cccC---Ch-------------HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 111111110000 0000 00 0111344578999999999999999999999853
No 26
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-41 Score=358.40 Aligned_cols=252 Identities=25% Similarity=0.331 Sum_probs=213.2
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
...|...++||+|+.|.||.|....+++.||||++........+-+.+|+.+|+..+|+|||.+++.+. .++..|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-----v~deLW 346 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYL-----VGDELW 346 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhc-----ccceeE
Confidence 346788899999999999999999999999999998877777788999999999999999999999854 348899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|||||+||+|.+.+... .+++.++..|+.++++||+|||.+ +|+|||||.+|||++.+|.+||+
T Consensus 347 VVMEym~ggsLTDvVt~~------------~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKlt 411 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKT------------RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLT 411 (550)
T ss_pred EEEeecCCCchhhhhhcc------------cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEe
Confidence 999999999999998764 489999999999999999999999 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++..+..... .....+||+.|||||++....|++|.||||||++++||+-|.+||-. +..+.+.....
T Consensus 412 DFGFcaqi~~~~~----KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLIa- 482 (550)
T KOG0578|consen 412 DFGFCAQISEEQS----KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLIA- 482 (550)
T ss_pred eeeeeeccccccC----ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHHh-
Confidence 9999987766443 23346899999999999999999999999999999999999999752 11111111100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
. . ..+.+..+....+.+.+++.+||+.||++||+|+|+++.
T Consensus 483 -~--------n----------------g~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 483 -T--------N----------------GTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -h--------c----------------CCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 0 0 011223344677889999999999999999999999864
No 27
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-40 Score=387.15 Aligned_cols=269 Identities=25% Similarity=0.435 Sum_probs=217.8
Q ss_pred CCCCCCceeccccceeEEEEEECCC-C----eEEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQD-G----TIVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~-~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
+..+..+.||+|+||.||.|+.... | ..||+|.++.. +.....+|.+|..+|++++|||||+++|+|.+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~----- 766 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD----- 766 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-----
Confidence 4456678999999999999998532 2 24899988644 44566899999999999999999999999865
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
....+|++|||++|+|..|+++.+..... ...++..+.+.++.|||+|+.||+++ ++|||||.++|+|+++..
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~----~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r 839 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQ----PSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERR 839 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCC----CCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccC
Confidence 47889999999999999999987543221 24789999999999999999999999 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 895 (988)
.+||+|||+|+.......+.... ...-+..|||||.+..+.++.|+|||||||++||++| |..||......+
T Consensus 840 ~VKIaDFGlArDiy~~~yyr~~~--~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~----- 912 (1025)
T KOG1095|consen 840 VVKIADFGLARDIYDKDYYRKHG--EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE----- 912 (1025)
T ss_pred cEEEcccchhHhhhhchheeccC--ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH-----
Confidence 99999999999544333222211 1234579999999999999999999999999999999 999987431110
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHHh
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNAL 975 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 975 (988)
. ......+.....+..||..++++|.+||+.+|++||++.++++.+.++.+..
T Consensus 913 --------------------------v-~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 913 --------------------------V-LLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred --------------------------H-HHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 0 0011122344556789999999999999999999999999999999997765
Q ss_pred hh
Q 001974 976 LE 977 (988)
Q Consensus 976 ~~ 977 (988)
..
T Consensus 966 ~~ 967 (1025)
T KOG1095|consen 966 LG 967 (1025)
T ss_pred cc
Confidence 54
No 28
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-41 Score=357.09 Aligned_cols=244 Identities=25% Similarity=0.434 Sum_probs=203.9
Q ss_pred CCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 666 SSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 666 ~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
...+-||.|+.|.||+|+. .++.||||.++.- -..+|+.|++++||||+.+.|+|... ..+|||||
T Consensus 127 sELeWlGSGaQGAVF~Grl--~netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqs-----PcyCIiME 192 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRL--HNETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQS-----PCYCIIME 192 (904)
T ss_pred hhhhhhccCcccceeeeec--cCceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCC-----ceeEEeee
Confidence 4468899999999999999 6889999987522 23578999999999999999999765 77899999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
||+.|-|++.++... +++......|.++||.||.|||.+ .|||||||+-||||+.+..+||+|||.
T Consensus 193 fCa~GqL~~VLka~~-----------~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGT 258 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAGR-----------PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGT 258 (904)
T ss_pred ccccccHHHHHhccC-----------ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccc
Confidence 999999999998764 688889999999999999999999 999999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhh
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHV 905 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (988)
++...+... ...+.||..|||||++...+.+.|+||||||||||||+||..||....... .+
T Consensus 259 S~e~~~~ST-----kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-----II-------- 320 (904)
T KOG4721|consen 259 SKELSDKST-----KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-----II-------- 320 (904)
T ss_pred hHhhhhhhh-----hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-----eE--------
Confidence 987655432 234679999999999999999999999999999999999999987431110 00
Q ss_pred hhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 906 IDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 906 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
|.. .-....+.-+..||+.+.-|+++||+..|..||++.+++..|+-...
T Consensus 321 --------------wGV----GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p 370 (904)
T KOG4721|consen 321 --------------WGV----GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP 370 (904)
T ss_pred --------------Eec----cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence 000 00011223356899999999999999999999999999998865443
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1e-40 Score=353.33 Aligned_cols=248 Identities=29% Similarity=0.441 Sum_probs=208.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+... ...+.+.+|++++++++||||+.++++ |+...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 578899999999999999999999999999999965433 334678999999999999999999999 5566999
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++|+||+.| +|..++...+ .++++.+..|+.|++.||.|||+. +|.|||+||.||+++..|++|+
T Consensus 77 ~vVte~a~g-~L~~il~~d~-----------~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~Kl 141 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDG-----------KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKL 141 (808)
T ss_pred EEEehhhhh-hHHHHHHhcc-----------CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceee
Confidence 999999955 9999998764 799999999999999999999999 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
||||+|+.... .......+.||+.|||||...+.+|+..+|.||+||++||+++|++||-.. .+.+.+...
T Consensus 142 cdFg~Ar~m~~----~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I 212 (808)
T KOG0597|consen 142 CDFGLARAMST----NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSI 212 (808)
T ss_pred chhhhhhhccc----CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHH
Confidence 99999986544 233344567999999999999999999999999999999999999997521 111111111
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. ++..| +......+..++...+.+||.+|.|..+++..
T Consensus 213 ~~-------------d~v~~---------------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 213 LK-------------DPVKP---------------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred hc-------------CCCCC---------------cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 11 11111 23566778999999999999999999998753
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=356.78 Aligned_cols=255 Identities=24% Similarity=0.370 Sum_probs=207.9
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc----cc-chhHHHHHHHHHHHhcC-CCCceEEEeeccccc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ----RH-GASKSFLAECKALKNIR-HRNLVKVITSCSSID 733 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 733 (988)
....+|.+.+.||+|+||+|+.|.+..+++.||+|++... .. ...+.+.+|+.+++.++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 3456899999999999999999999999999999987543 11 23456778999999998 999999999954
Q ss_pred ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC
Q 001974 734 FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD 813 (988)
Q Consensus 734 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 813 (988)
.....++||||+.+|+|.+++... .++.+.++..+++|++.|++|+|++ ||+||||||+||+++
T Consensus 91 --t~~~~~ivmEy~~gGdL~~~i~~~-----------g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld 154 (370)
T KOG0583|consen 91 --TPTKIYIVMEYCSGGDLFDYIVNK-----------GRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLD 154 (370)
T ss_pred --cCCeEEEEEEecCCccHHHHHHHc-----------CCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEec
Confidence 447799999999999999999873 3789999999999999999999999 999999999999999
Q ss_pred CC-CcEEEeeeccccccc-ccccccceeccccccccccccCcccCCCC-CC-CccchHHHHHHHHHHHhCCCCCCccccC
Q 001974 814 ND-MIAHVGDFGLARVRQ-EVSNLTQSCSVGVRGTIGYAAPEYGLGSE-VS-TNGDIYSYGILLLEMVTGKKPTDVMFEG 889 (988)
Q Consensus 814 ~~-~~~kL~DfG~a~~~~-~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDvwslG~vl~elltg~~p~~~~~~~ 889 (988)
.+ +++||+|||++.... .... .....||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.
T Consensus 155 ~~~~~~Kl~DFG~s~~~~~~~~~-----l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d---- 225 (370)
T KOG0583|consen 155 GNEGNLKLSDFGLSAISPGEDGL-----LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDD---- 225 (370)
T ss_pred CCCCCEEEeccccccccCCCCCc-----ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCC----
Confidence 99 999999999998763 2222 22356999999999999977 85 789999999999999999999984
Q ss_pred CcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccch-hHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 890 DLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIEC-PISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 890 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
.+....... +.......+..+ ..++.+++.+|+..||.+|+|+.||+ .-
T Consensus 226 -~~~~~l~~k----------------------------i~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h 275 (370)
T KOG0583|consen 226 -SNVPNLYRK----------------------------IRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EH 275 (370)
T ss_pred -ccHHHHHHH----------------------------HhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hC
Confidence 111111111 111112223334 67789999999999999999999999 44
Q ss_pred HHHH
Q 001974 969 QSVK 972 (988)
Q Consensus 969 ~~i~ 972 (988)
.-++
T Consensus 276 ~w~~ 279 (370)
T KOG0583|consen 276 PWFQ 279 (370)
T ss_pred hhhc
Confidence 4343
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-40 Score=322.35 Aligned_cols=238 Identities=24% Similarity=0.312 Sum_probs=201.0
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
.++|+..+.||.|+||.|.+++.+.+|..+|+|+++...- ...+...+|..+++.+.||+++++++.+ .+.+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KDNS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----ccCC
Confidence 4578899999999999999999999999999999975433 3345678899999999999999999984 4558
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||++||.|..++++.+ ++++..++.+|.||+.|++|||+. +|++||+||+|||+|.+|.+
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~-----------rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~i 183 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSG-----------RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHI 183 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcC-----------CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcE
Confidence 9999999999999999998764 799999999999999999999999 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
||+|||+|+..... +.+..||+.|+|||+++..++..++|.|||||++|||+.|.+||....+ .+
T Consensus 184 KitDFGFAK~v~~r-------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~--- 248 (355)
T KOG0616|consen 184 KITDFGFAKRVSGR-------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQ--- 248 (355)
T ss_pred EEEeccceEEecCc-------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HH---
Confidence 99999999876542 2235699999999999999999999999999999999999999863211 11
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCC
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDR 958 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 958 (988)
+.+. +-..+...+.-...++.+|+...++.|-.+|
T Consensus 249 --iY~K-----------------------I~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 249 --IYEK-----------------------ILEGKVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --HHHH-----------------------HHhCcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 1111 1112223344566778999999999999999
No 32
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-40 Score=355.14 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=212.7
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.-|...+.||+|+.|.|-+|++..+|+.+|||++.... ......+.+|+-+|+-+.||||+++|++ +++..+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~~ 86 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQH 86 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCce
Confidence 34778899999999999999999999999999996542 2234568899999999999999999999 556699
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
+|+|.||+++|.|.+++...+ ++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++|
T Consensus 87 lylvlEyv~gGELFdylv~kG-----------~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIK 152 (786)
T KOG0588|consen 87 LYLVLEYVPGGELFDYLVRKG-----------PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIK 152 (786)
T ss_pred EEEEEEecCCchhHHHHHhhC-----------CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEe
Confidence 999999999999999997765 799999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCC-CccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVS-TNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||+|..-.+..-..+. .|.+.|.|||++.+.+|. .++||||.|||+|.|+||+.||+ |+++.....
T Consensus 153 IADFGMAsLe~~gklLeTS-----CGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFd-----DdNir~LLl 222 (786)
T KOG0588|consen 153 IADFGMASLEVPGKLLETS-----CGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFD-----DDNIRVLLL 222 (786)
T ss_pred eeccceeecccCCcccccc-----CCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCC-----CccHHHHHH
Confidence 9999999876655544444 499999999999999984 78999999999999999999998 333333322
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
+. +....+.+..++.+.++|+.+|+..||++|.|++||++.-
T Consensus 223 KV----------------------------~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 223 KV----------------------------QRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HH----------------------------HcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 21 2222233457888999999999999999999999998763
No 33
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=337.16 Aligned_cols=289 Identities=25% Similarity=0.282 Sum_probs=214.7
Q ss_pred HHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEee--ccccchhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 658 LFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFN--LQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 658 l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
.+.....|...+.||+|+||.|+.|.++.+|+.||+|.+. .......++..+|+++++.++|+||+.+++.+......
T Consensus 17 ~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~ 96 (359)
T KOG0660|consen 17 LFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRD 96 (359)
T ss_pred EEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccc
Confidence 3445667777899999999999999999999999999986 44555668889999999999999999999998764344
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.-...|+|+|+| +.+|...++... .++...+..++.||++||.|+|+. +|+|||+||+|++++.+
T Consensus 97 ~f~DvYiV~elM-etDL~~iik~~~-----------~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~ 161 (359)
T KOG0660|consen 97 KFNDVYLVFELM-ETDLHQIIKSQQ-----------DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNAD 161 (359)
T ss_pred ccceeEEehhHH-hhHHHHHHHcCc-----------cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccC
Confidence 557789999999 789999998653 589999999999999999999999 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
..+||+|||+|+..... ......+..+.|.+|+|||++.. ..|+.+.||||.||++.||++|++-|... ..+.
T Consensus 162 c~lKI~DFGLAR~~~~~--~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~----d~v~ 235 (359)
T KOG0660|consen 162 CDLKICDFGLARYLDKF--FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK----DYVH 235 (359)
T ss_pred CCEEeccccceeecccc--CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC----chHH
Confidence 99999999999987653 12222345678999999998765 68999999999999999999999987632 1111
Q ss_pred HH--HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 895 NY--ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 895 ~~--~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+. ....+...-.+.+...-......+-......-+.+....-+...+...+|+.+||..||.+|+|++|+++.
T Consensus 236 Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 236 QLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11 11111110000000000000000000000000111111123566778999999999999999999998764
No 34
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=318.58 Aligned_cols=275 Identities=19% Similarity=0.255 Sum_probs=219.0
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
...++|++.+.+|+|||+.||+++.-.+++.+|+|++.....+..+..++|++..++++||||+++++++....-+....
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 45678999999999999999999998899999999998777777889999999999999999999999987653445567
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.|++++|+..|+|.+.+......+ ..+++.++++|+.+|++||++||+. .++++||||||.||++++++.++
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg-------~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~v 169 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKG-------NFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPV 169 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcC-------CccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceE
Confidence 899999999999999997765432 3689999999999999999999998 34699999999999999999999
Q ss_pred Eeeecccccccccccccc-----eeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCc
Q 001974 820 VGDFGLARVRQEVSNLTQ-----SCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDL 891 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 891 (988)
+.|||.++...-.-.... ........|..|+|||.+. +...++++|||||||++|+|+.|..||+...+...
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~Gg 249 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGG 249 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCC
Confidence 999999975432111000 0011234789999999875 45678999999999999999999999986544322
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
.+.-. +... +........++..+.++++.|++.||.+||++.+++..++++
T Consensus 250 SlaLA-----------v~n~------------------q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 250 SLALA-----------VQNA------------------QISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred eEEEe-----------eecc------------------ccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 21110 0000 001111224778899999999999999999999999998875
No 35
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3e-39 Score=343.75 Aligned_cols=258 Identities=24% Similarity=0.370 Sum_probs=205.5
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
...++|+.++.||+|+||.||+|+.+.+|..+|+|++++. .....+.+..|-.+|....+|.||++|.. |++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD 212 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQD 212 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecC
Confidence 3567899999999999999999999999999999999744 33455778899999999999999999988 677
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
.+++|+||||++||++..++.... .+++..++.++.+++.|++.+|+. |+|||||||+|+|||..|
T Consensus 213 ~~~LYLiMEylPGGD~mTLL~~~~-----------~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~G 278 (550)
T KOG0605|consen 213 KEYLYLIMEYLPGGDMMTLLMRKD-----------TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKG 278 (550)
T ss_pred CCeeEEEEEecCCccHHHHHHhcC-----------cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCC
Confidence 899999999999999999998765 799999999999999999999999 999999999999999999
Q ss_pred cEEEeeeccccccccc---------------------cccc-----ce-----------------eccccccccccccCc
Q 001974 817 IAHVGDFGLARVRQEV---------------------SNLT-----QS-----------------CSVGVRGTIGYAAPE 853 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~---------------------~~~~-----~~-----------------~~~~~~gt~~y~aPE 853 (988)
++||+|||++.-.... .... .. .....+|||.|||||
T Consensus 279 HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPE 358 (550)
T KOG0605|consen 279 HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPE 358 (550)
T ss_pred CEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchH
Confidence 9999999998632210 0000 00 112357999999999
Q ss_pred ccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhh
Q 001974 854 YGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKI 933 (988)
Q Consensus 854 ~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~ 933 (988)
++.+..|+..+|.||+|||+|||+.|.+||..... ..-| +.... |.. .-..
T Consensus 359 Vll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp----~~T~-rkI~n-----------------wr~-------~l~f 409 (550)
T KOG0605|consen 359 VLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETP----QETY-RKIVN-----------------WRE-------TLKF 409 (550)
T ss_pred HHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCH----HHHH-HHHHH-----------------Hhh-------hccC
Confidence 99999999999999999999999999999863211 1111 11100 100 0001
Q ss_pred ccccchhHHHHHHhhcccCcCCCCCCC---HHHHHH
Q 001974 934 NGKIECPISMVRIGVACSVESPQDRMS---ITNVVH 966 (988)
Q Consensus 934 ~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 966 (988)
.....+.++..+||.+|+. ||++|.- ++||.+
T Consensus 410 P~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 410 PEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred CCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 1123455788999999999 9999964 555543
No 36
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=344.94 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=207.4
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
...|+..+.||+|+||.||+|.+..+++.||+|++..+. ....++.++|+.++..++++||.++|+.+ -.+..+
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsy-----l~g~~L 86 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSY-----LKGTKL 86 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhe-----eecccH
Confidence 345778899999999999999999999999999998553 34467899999999999999999999984 445889
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
+++||||.||++.+.++... .+.+..+..|++++..|+.|||++ +.+|||||+.||++..+|.+|+
T Consensus 87 wiiMey~~gGsv~~lL~~~~-----------~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl 152 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGN-----------ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKL 152 (467)
T ss_pred HHHHHHhcCcchhhhhccCC-----------CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEE
Confidence 99999999999999998764 346777788999999999999999 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||.+......... ...++||+.|||||++....|+.|+||||+|++.+||.+|.+|+....+..
T Consensus 153 ~DfgVa~ql~~~~~r----r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr---------- 218 (467)
T KOG0201|consen 153 ADFGVAGQLTNTVKR----RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR---------- 218 (467)
T ss_pred Eecceeeeeechhhc----cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce----------
Confidence 999999876554322 245789999999999999899999999999999999999999986432210
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.-.+.+... +.....+.+.+.+++..|+.+||+.||||.++++.
T Consensus 219 ----vlflIpk~~P------------------P~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 219 ----VLFLIPKSAP------------------PRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ----EEEeccCCCC------------------CccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 0000000000 01112566779999999999999999999999863
No 37
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.9e-39 Score=359.64 Aligned_cols=273 Identities=24% Similarity=0.397 Sum_probs=207.8
Q ss_pred hhCCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeecccc-chhHHHHHHHHHHHhc-CCCCceEEEeeccccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQRH-GASKSFLAECKALKNI-RHRNLVKVITSCSSID 733 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 733 (988)
+.++|++.++||+|+||.||+|.+. .+++.||+|+++.... ...+.+.+|+.+++++ +||||++++++|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-- 82 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK-- 82 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC--
Confidence 4578999999999999999999852 3456899999864332 3346789999999999 89999999998743
Q ss_pred ccCCCceEEEEeeccccchhhhcCCCCCCCch------------------------------------------------
Q 001974 734 FQGNDFKALVYEFMTNGSLENWLHPDAVPQKD------------------------------------------------ 765 (988)
Q Consensus 734 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------------------------------------------------ 765 (988)
.+...++||||+++|+|.+++.........
T Consensus 83 --~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 83 --PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred --CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 235689999999999999998754211000
Q ss_pred ---hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccccceeccc
Q 001974 766 ---VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVG 842 (988)
Q Consensus 766 ---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~ 842 (988)
......++++.++..++.||++||+|||+. +|+||||||+||++++++.+||+|||+++.......... ...
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~--~~~ 235 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR--KGS 235 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhc--ccC
Confidence 000123588899999999999999999998 999999999999999999999999999986533221111 112
Q ss_pred cccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhh
Q 001974 843 VRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWD 921 (988)
Q Consensus 843 ~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 921 (988)
..++..|+|||++.+..++.++|||||||++|||++ |..||......+ ... . .+.. .
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~----~~~-~----~~~~---~---------- 293 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE----EFC-Q----RLKD---G---------- 293 (338)
T ss_pred CCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH----HHH-H----HHhc---C----------
Confidence 346788999999999999999999999999999997 999986421110 000 0 0000 0
Q ss_pred hhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 922 ATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
.....+..+++++.+++.+||+.||++|||+.|+++.|+++..
T Consensus 294 ---------~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 294 ---------TRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred ---------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0001123466789999999999999999999999999998765
No 38
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-39 Score=324.24 Aligned_cols=272 Identities=22% Similarity=0.275 Sum_probs=207.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.+.|+.+++|++|+||.||+|+++.+++.||+|+++.+.. +-.-...+||.++.+.+|||||.+-.+.... .-+.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~---~~d~ 151 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS---NMDK 151 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---ccce
Confidence 3568889999999999999999999999999999985543 3334678999999999999999999887654 3466
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
+|+||||| .-||...+.... +++...++.-++.|+++|++|||.. .|+||||||+|+|+.+.|.+|
T Consensus 152 iy~VMe~~-EhDLksl~d~m~----------q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lK 217 (419)
T KOG0663|consen 152 IYIVMEYV-EHDLKSLMETMK----------QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILK 217 (419)
T ss_pred eeeeHHHH-HhhHHHHHHhcc----------CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEE
Confidence 99999999 569999987765 5799999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||+|+.++..... .+..+-|..|+|||.+.+ ..|+++.|+||+|||+.||+++++.|....+ +.+.
T Consensus 218 iaDFGLAR~ygsp~k~----~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE----~dQl-- 287 (419)
T KOG0663|consen 218 IADFGLAREYGSPLKP----YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE----IDQL-- 287 (419)
T ss_pred ecccchhhhhcCCccc----CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch----HHHH--
Confidence 9999999988765322 223567999999999887 4689999999999999999999998764322 2111
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHH---------hhhhh--cccc-chhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRL---------RQAKI--NGKI-ECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~---------~~~~~--~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..++.-...+....|+....-.. +.... .... .....-.+++..++.+||++|.||+|.++
T Consensus 288 -------~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 288 -------DKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred -------HHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 11111111122222211111000 00000 0011 14466789999999999999999999875
Q ss_pred H
Q 001974 967 E 967 (988)
Q Consensus 967 ~ 967 (988)
.
T Consensus 361 h 361 (419)
T KOG0663|consen 361 H 361 (419)
T ss_pred c
Confidence 3
No 39
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=345.36 Aligned_cols=265 Identities=23% Similarity=0.366 Sum_probs=211.6
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccch-hHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA-SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.+...+.++||+|-||.|.+++.. .+..||||.++..+... ..+|.+|+++|.+++||||++++|+|... +.+
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~D-----ePi 610 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQD-----DPL 610 (807)
T ss_pred hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecC-----Cch
Confidence 345677899999999999999985 46999999998765544 48999999999999999999999999754 889
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++|+|||++|+|.+|+.++..+. ........|+.|||.||+||.+. ++||||+.++|+|+|.++++||
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt---------~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKi 678 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPT---------AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKI 678 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcc---------cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEe
Confidence 99999999999999998775421 24445677999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh--CCCCCCccccCCcchHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT--GKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt--g~~p~~~~~~~~~~~~~~~~ 898 (988)
+|||+++.+-..+.+ ......+-+.+|||||.+..++++.++|||+||+++||+++ ...||....++
T Consensus 679 adfgmsR~lysg~yy--~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--------- 747 (807)
T KOG1094|consen 679 ADFGMSRNLYSGDYY--RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--------- 747 (807)
T ss_pred cCcccccccccCCce--eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---------
Confidence 999999955443322 12223456789999999999999999999999999999876 77887643221
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
..-+...++++.-- ++.-+..+.-||.++.++|.+||..|-++||+++++...|++.
T Consensus 748 -~vven~~~~~~~~~---------------~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 748 -QVVENAGEFFRDQG---------------RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred -HHHHhhhhhcCCCC---------------cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11111122221100 1112334567999999999999999999999999999988764
No 40
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-39 Score=335.25 Aligned_cols=261 Identities=25% Similarity=0.331 Sum_probs=200.1
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--------------cchhHHHHHHHHHHHhcCCCCceEE
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--------------HGASKSFLAECKALKNIRHRNLVKV 725 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--------------~~~~~~~~~E~~~l~~l~h~niv~~ 725 (988)
+..++|++.+.||+|.||.|-+|++..+++.||+|++.... ....+...+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34578999999999999999999999999999999995321 1122578999999999999999999
Q ss_pred EeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccC
Q 001974 726 ITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDL 805 (988)
Q Consensus 726 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 805 (988)
+++..+ ...+.+|||+|||..|.+...-... ..+++.++++|+.+++.||+|||.+ +||||||
T Consensus 174 iEvLDD---P~s~~~YlVley~s~G~v~w~p~d~-----------~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDI 236 (576)
T KOG0585|consen 174 IEVLDD---PESDKLYLVLEYCSKGEVKWCPPDK-----------PELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDI 236 (576)
T ss_pred EEeecC---cccCceEEEEEeccCCccccCCCCc-----------ccccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence 998654 3558899999999888775332211 1389999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEeeecccccccccccc-cceeccccccccccccCcccCCCC----CCCccchHHHHHHHHHHHhCC
Q 001974 806 KPGNVLLDNDMIAHVGDFGLARVRQEVSNL-TQSCSVGVRGTIGYAAPEYGLGSE----VSTNGDIYSYGILLLEMVTGK 880 (988)
Q Consensus 806 kp~NIll~~~~~~kL~DfG~a~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~vl~elltg~ 880 (988)
||+|+|++++|++||+|||.+......... ....-...+||+.|+|||...++. .+.+.||||+||+||.|+.|+
T Consensus 237 KPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~ 316 (576)
T KOG0585|consen 237 KPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQ 316 (576)
T ss_pred chhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhcc
Confidence 999999999999999999999865332111 111122367999999999987732 356889999999999999999
Q ss_pred CCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC
Q 001974 881 KPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS 960 (988)
Q Consensus 881 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 960 (988)
.||-..+. + +-...++...+. .....+....+.+||.++|.+||++|.+
T Consensus 317 ~PF~~~~~----~---------~l~~KIvn~pL~------------------fP~~pe~~e~~kDli~~lL~KdP~~Ri~ 365 (576)
T KOG0585|consen 317 LPFFDDFE----L---------ELFDKIVNDPLE------------------FPENPEINEDLKDLIKRLLEKDPEQRIT 365 (576)
T ss_pred CCcccchH----H---------HHHHHHhcCccc------------------CCCcccccHHHHHHHHHHhhcChhheee
Confidence 99852111 0 001111111110 0111245667899999999999999999
Q ss_pred HHHHHHHH
Q 001974 961 ITNVVHEL 968 (988)
Q Consensus 961 ~~evl~~L 968 (988)
..||....
T Consensus 366 l~~ik~Hp 373 (576)
T KOG0585|consen 366 LPDIKLHP 373 (576)
T ss_pred hhhheecc
Confidence 99987654
No 41
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-39 Score=354.64 Aligned_cols=268 Identities=22% Similarity=0.388 Sum_probs=214.2
Q ss_pred HHHHhhCCCCCCceeccccceeEEEEEECCCCe---E-EEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeec
Q 001974 657 SLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGT---I-VAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSC 729 (988)
Q Consensus 657 ~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~---~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 729 (988)
.++...++....++||+|+||.||+|+.+..+. . ||||..+.. ......++.+|+++|++++|||||++||++
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa 230 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA 230 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 344455666677999999999999999965422 3 899998742 245567899999999999999999999997
Q ss_pred ccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCC
Q 001974 730 SSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGN 809 (988)
Q Consensus 730 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 809 (988)
.. ...+++|||+|.||+|.+|++... ..++..+...++.+.|.||+|||++ ++|||||.++|
T Consensus 231 ~~-----~~Pl~ivmEl~~gGsL~~~L~k~~----------~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARN 292 (474)
T KOG0194|consen 231 VL-----EEPLMLVMELCNGGSLDDYLKKNK----------KSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARN 292 (474)
T ss_pred cC-----CCccEEEEEecCCCcHHHHHHhCC----------CCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHH
Confidence 54 488999999999999999998876 2589999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCcccc
Q 001974 810 VLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFE 888 (988)
Q Consensus 810 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~ 888 (988)
+|++.++.+||+|||+++.......... ...-+.+|+|||.+....|+.++|||||||++||+++ |..||.....
T Consensus 293 cL~~~~~~vKISDFGLs~~~~~~~~~~~----~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~ 368 (474)
T KOG0194|consen 293 CLYSKKGVVKISDFGLSRAGSQYVMKKF----LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN 368 (474)
T ss_pred heecCCCeEEeCccccccCCcceeeccc----cccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH
Confidence 9999999999999999986542111110 1135689999999999999999999999999999999 8999874321
Q ss_pred CCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 889 GDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
. .+ ...+. . .......+...|.++..++.+||..+|++||+|.++.+.+
T Consensus 369 ~------~v----~~kI~---~------------------~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l 417 (474)
T KOG0194|consen 369 Y------EV----KAKIV---K------------------NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKL 417 (474)
T ss_pred H------HH----HHHHH---h------------------cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHH
Confidence 1 01 11110 0 0001122336788899999999999999999999999999
Q ss_pred HHHHHHhhh
Q 001974 969 QSVKNALLE 977 (988)
Q Consensus 969 ~~i~~~~~~ 977 (988)
+.+......
T Consensus 418 ~~~~~~~~~ 426 (474)
T KOG0194|consen 418 EALEKKKEA 426 (474)
T ss_pred HHHHhcccc
Confidence 999776553
No 42
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=335.18 Aligned_cols=277 Identities=25% Similarity=0.330 Sum_probs=204.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHh--cCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKN--IRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
......+.+|+|+||.||+|+. +++.||||++... ..+.|..|-++.+. ++|+||++++++-...+.. ...+
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~ey 283 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEY 283 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccce
Confidence 3345568899999999999999 6799999999643 34677788777765 4899999999985544222 4578
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcC------CCCCeEeccCCCCCeeeCC
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHH------CQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------~~~~ivH~Dlkp~NIll~~ 814 (988)
++|+||.+.|+|.+|+..+ .++|.+..+|+..+++||+|||+. .+++|+|||||++||||.+
T Consensus 284 wLVt~fh~kGsL~dyL~~n------------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~ 351 (534)
T KOG3653|consen 284 WLVTEFHPKGSLCDYLKAN------------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN 351 (534)
T ss_pred eEEeeeccCCcHHHHHHhc------------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc
Confidence 9999999999999999875 589999999999999999999975 4678999999999999999
Q ss_pred CCcEEEeeecccccccccccccceeccccccccccccCcccCCCC------CCCccchHHHHHHHHHHHhCCCCCCcccc
Q 001974 815 DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSE------VSTNGDIYSYGILLLEMVTGKKPTDVMFE 888 (988)
Q Consensus 815 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwslG~vl~elltg~~p~~~~~~ 888 (988)
|+++.|+|||+|..+..... .....+.+||.+|||||++.+.. .-.+.||||+|.|+|||+++..-++. .
T Consensus 352 DlTccIaDFGLAl~~~p~~~--~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~--~ 427 (534)
T KOG3653|consen 352 DLTCCIADFGLALRLEPGKP--QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP--G 427 (534)
T ss_pred CCcEEeeccceeEEecCCCC--CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC--C
Confidence 99999999999998875433 33345578999999999987742 22468999999999999997654421 0
Q ss_pred CCcchHHHHHHHHhh-----hhhh-hhccccccC-cchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH
Q 001974 889 GDLNLHNYARTALLD-----HVID-IVDPILIND-VEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI 961 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~-----~~~~-~~d~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 961 (988)
.-.++..-....+.. ++.+ ++.++..+. +..|.. -.....+.+.+..||..||+.|.|+
T Consensus 428 ~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~--------------h~~~~~l~et~EeCWDhDaeARLTA 493 (534)
T KOG3653|consen 428 PVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRK--------------HAGMAVLCETIEECWDHDAEARLTA 493 (534)
T ss_pred CCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhc--------------CccHHHHHHHHHHHcCCchhhhhhh
Confidence 001111111111111 1111 011111111 111211 1345668999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 001974 962 TNVVHELQSVKNAL 975 (988)
Q Consensus 962 ~evl~~L~~i~~~~ 975 (988)
.-+-+++.++..-.
T Consensus 494 ~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 494 GCVEERMAELMMLW 507 (534)
T ss_pred HHHHHHHHHHhccC
Confidence 99999999886543
No 43
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-38 Score=340.85 Aligned_cols=251 Identities=22% Similarity=0.307 Sum_probs=201.0
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccccch---hHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA---SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
..||+|++|.||+|.+ +|+.||||+++...... .+.+.+|+.++++++||||+++++++.+. .......++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEEE
Confidence 6799999999999998 78999999997543322 46788999999999999999999987542 123457899999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
|+++|+|.+++.... .+++.....++.|++.|++|||+. .+++||||||+||++++++.+||+|||+
T Consensus 103 y~~~g~L~~~l~~~~-----------~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~ 169 (283)
T PHA02988 103 YCTRGYLREVLDKEK-----------DLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGL 169 (283)
T ss_pred eCCCCcHHHHHhhCC-----------CCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccch
Confidence 999999999997643 578899999999999999999973 2788999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCC--CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhh
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG--SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ..........
T Consensus 170 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-----~~~~~~i~~~ 237 (283)
T PHA02988 170 EKILSSPP-------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-----KEIYDLIINK 237 (283)
T ss_pred Hhhhcccc-------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhc
Confidence 98653321 12347899999999876 6889999999999999999999999874211 1111100000
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
......+..++.++.+++.+||+.||++|||++|+++.|+.++.
T Consensus 238 --------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 238 --------------------------NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred --------------------------CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 00011123577889999999999999999999999999998754
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-39 Score=308.16 Aligned_cols=251 Identities=23% Similarity=0.338 Sum_probs=210.4
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
+.++|++.+.||+|.||.||.|+.++++-.||+|++... ......++.+|+++-+.++||||+++|+++ .+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f-----hd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF-----HDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe-----ecc
Confidence 356799999999999999999999999999999998533 223446899999999999999999999994 456
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...|+++||..+|.+...++.... .++++.....++.|+|.|+.|+|.. +|+||||||+|+|++..+.
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~---------~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~ 162 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRM---------KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGE 162 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhccc---------ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCC
Confidence 899999999999999999985543 3678888999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
.||+|||.+....... .....||..|.|||...+..++..+|+|++|++.||++.|.+||.....+ .
T Consensus 163 lkiAdfGwsV~~p~~k------R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-e------ 229 (281)
T KOG0580|consen 163 LKIADFGWSVHAPSNK------RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-E------ 229 (281)
T ss_pred eeccCCCceeecCCCC------ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-H------
Confidence 9999999997544221 12345999999999999999999999999999999999999998743211 0
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.-+++.......+..++.+..++|.+|+..+|.+|.+..|+++.
T Consensus 230 --------------------------tYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 230 --------------------------TYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred --------------------------HHHHHHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 01122222233345677889999999999999999999999875
No 45
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=340.77 Aligned_cols=256 Identities=25% Similarity=0.439 Sum_probs=215.6
Q ss_pred CCCCceeccccceeEEEEEECCC--C--eEEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQD--G--TIVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~--~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.+..+.||+|-||.||+|.+... | -.||||..+.+ ..+..+.|.+|..+|++++||||++++|+|.+ ..
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------~P 464 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------QP 464 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec------cc
Confidence 44557899999999999998432 2 25899998763 44556889999999999999999999999875 57
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.+||||.++.|.|+.|++..+ ..++......++.||+.||+|||+. ++|||||.++|||+.....+|
T Consensus 465 ~WivmEL~~~GELr~yLq~nk----------~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVK 531 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNK----------DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVK 531 (974)
T ss_pred eeEEEecccchhHHHHHHhcc----------ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceee
Confidence 899999999999999998876 3688889999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||+++..+....+... ...-+..|||||.+.-..++.++|||-|||++||++. |..||......|.-
T Consensus 532 LaDFGLSR~~ed~~yYkaS---~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI------ 602 (974)
T KOG4257|consen 532 LADFGLSRYLEDDAYYKAS---RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI------ 602 (974)
T ss_pred ecccchhhhccccchhhcc---ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE------
Confidence 9999999988776544333 2335778999999999999999999999999999988 99999754333210
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
+..+ ....+..+..||+.++.|+.+||++||.+||.+.|+...|+++..+
T Consensus 603 ----------------~~iE----------nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qe 652 (974)
T KOG4257|consen 603 ----------------GHIE----------NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQE 652 (974)
T ss_pred ----------------EEec----------CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence 0000 1223456778999999999999999999999999999999998763
No 46
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-39 Score=342.42 Aligned_cols=264 Identities=27% Similarity=0.461 Sum_probs=220.3
Q ss_pred HHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 656 ESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 656 ~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
+.++....+....++||-|.||.||.|.|++..-.||||.++ ++....++|..|+.+|+.++|||+|+++|+|...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK-EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E--- 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE--- 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh-hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccC---
Confidence 445555556677889999999999999999999999999997 4455678999999999999999999999999753
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
..+|||+|||.+|+|.+|+++... +.++....+.+|.||+.||+||..+ ++|||||.++|+|+.++
T Consensus 336 --pPFYIiTEfM~yGNLLdYLRecnr---------~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEn 401 (1157)
T KOG4278|consen 336 --PPFYIITEFMCYGNLLDYLRECNR---------SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGEN 401 (1157)
T ss_pred --CCeEEEEecccCccHHHHHHHhch---------hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhcccccc
Confidence 678999999999999999988753 4567778899999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~ 894 (988)
..+|++|||+++..... ++....+..-++.|.|||-+....++.|+|||+|||+|||+.| |-.||... ++
T Consensus 402 hiVKvADFGLsRlMtgD---TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dl- 472 (1157)
T KOG4278|consen 402 HIVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DL- 472 (1157)
T ss_pred ceEEeeccchhhhhcCC---ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cH-
Confidence 99999999999976543 2223334456789999999999999999999999999999999 99998743 11
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
.++.+.+..-+.- ..+..||+.+++||..||++.|.+||+++|+.+.++.+.
T Consensus 473 --------SqVY~LLEkgyRM------------------~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 473 --------SQVYGLLEKGYRM------------------DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred --------HHHHHHHhccccc------------------cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 1122222222211 234589999999999999999999999999999997753
No 47
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.6e-38 Score=341.80 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=200.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.|+..+.||+|+||.||+|.+..+|+.||+|.+.... ......+.+|++++++++|++|+++++++. .++..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~-----~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEc-----cCCeE
Confidence 3778899999999999999998899999999986432 222346788999999999999999999854 44789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl 143 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGN---------PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRI 143 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEE
Confidence 999999999999988754321 2578999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||++........ .....||..|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 144 ~Dfg~~~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~-- 214 (285)
T cd05631 144 SDLGLAVQIPEGET-----VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVD-- 214 (285)
T ss_pred eeCCCcEEcCCCCe-----ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHH--
Confidence 99999976533221 123458999999999999999999999999999999999999987422110 000000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC-----HHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS-----ITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 967 (988)
.. ........+...+.++.+|+.+||+.||++||+ ++|+++.
T Consensus 215 --~~-----------------------~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 215 --RR-----------------------VKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred --HH-----------------------hhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 00 000111122346678999999999999999997 7888763
No 48
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4.1e-38 Score=351.93 Aligned_cols=286 Identities=22% Similarity=0.250 Sum_probs=202.3
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|+||.||+|++..+++.||+|+++.. .......+.+|++++++++||||+++++++...........+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 588899999999999999999989999999998632 223345688999999999999999999987544333335689
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+ +++|.+++.... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 lv~e~~-~~~L~~~l~~~~-----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~ 145 (338)
T cd07859 81 VVFELM-ESDLHQVIKAND-----------DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKIC 145 (338)
T ss_pred EEEecC-CCCHHHHHHhcc-----------cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEc
Confidence 999999 578998886542 588999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCC--CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG--SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|||+++......... .......||..|+|||++.+ ..++.++|||||||++|||++|+.||..... .........
T Consensus 146 Dfg~~~~~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~ 222 (338)
T cd07859 146 DFGLARVAFNDTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITD 222 (338)
T ss_pred cCccccccccccCcc-ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHH
Confidence 999997543222111 11123468999999999876 6789999999999999999999999863211 000011111
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.......+................................++.+.+++.+||+.||++|||++|+++.
T Consensus 223 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 223 LLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000000000000000000000000000001112456778999999999999999999999864
No 49
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.2e-39 Score=327.35 Aligned_cols=282 Identities=23% Similarity=0.300 Sum_probs=204.9
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
.|+..+++|.|+||.||+|....+++.||||..-.+.. .-.+|+.+|+++.|||||++..++....-.+.-...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 46678999999999999999999999999998754332 23479999999999999999988776532223356689
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC-CcEEEee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND-MIAHVGD 822 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~D 822 (988)
|||| ..+|.++++..... .++++...++-++.||.+||+|||+. +|+||||||.|+|+|.+ |.+||||
T Consensus 101 leym-P~tL~~~~r~~~~~-------~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicD 169 (364)
T KOG0658|consen 101 LEYM-PETLYRVIRHYTRA-------NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICD 169 (364)
T ss_pred HHhc-hHHHHHHHHHHhhc-------CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEecc
Confidence 9999 46999888753211 14688888999999999999999998 99999999999999976 8999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH--HH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA--RT 899 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~--~~ 899 (988)
||.|+......... ....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.. +....+.+ -.
T Consensus 170 FGSAK~L~~~epni-----SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG----~s~~dQL~eIik 240 (364)
T KOG0658|consen 170 FGSAKVLVKGEPNI-----SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG----DSSVDQLVEIIK 240 (364)
T ss_pred CCcceeeccCCCce-----eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC----CCHHHHHHHHHH
Confidence 99999876654332 24578999999998885 699999999999999999999998763 22222221 11
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhh-hhh-ccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH--HHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQ-AKI-NGKIECPISMVRIGVACSVESPQDRMSITNVVHE--LQSVKN 973 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~~ 973 (988)
.+...-.+-+..+-.... + .....+.. ... -.....+++..+++.++++++|.+|.++.|++.. .+++++
T Consensus 241 ~lG~Pt~e~I~~mn~~y~-~---~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 241 VLGTPTREDIKSMNPNYT-E---FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred HhCCCCHHHHhhcCcccc-c---ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 111111111111111000 0 00000011 100 1234678889999999999999999999999853 455443
No 50
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.3e-38 Score=343.85 Aligned_cols=246 Identities=22% Similarity=0.313 Sum_probs=200.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++ .+++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccCCe
Confidence 47899999999999999999999899999999986432 22345688999999999999999999874 44578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+|
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~k 141 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG-----------RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIK 141 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEE
Confidence 999999999999999986543 588899999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||+++...... ....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 142 l~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~ 209 (291)
T cd05612 142 LTDFGFAKKLRDRT-------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEK 209 (291)
T ss_pred EEecCcchhccCCc-------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH
Confidence 99999998653311 124589999999999998999999999999999999999999863211 011100
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC-----HHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS-----ITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 967 (988)
.. ......+...+..+.+++.+||+.||.+||+ ++|+++.
T Consensus 210 i~----------------------------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 210 IL----------------------------AGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred HH----------------------------hCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 00 0011112245667899999999999999995 8887754
No 51
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=322.55 Aligned_cols=273 Identities=23% Similarity=0.369 Sum_probs=209.0
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc--CCCCceEEEeecccccccCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI--RHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~ 739 (988)
..+....+.||+|.||+||+|.| .|+.||||+|...+ .+...+|.++++.+ +|+||+.+++.-... -..-..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~-~gs~TQ 283 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKD-NGSWTQ 283 (513)
T ss_pred hheeEEEEEecCccccceeeccc--cCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccC-CCceEE
Confidence 45677889999999999999999 79999999996433 35666777777765 999999999873221 112245
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcC-----CCCCeEeccCCCCCeeeCC
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHH-----CQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-----~~~~ivH~Dlkp~NIll~~ 814 (988)
.++|++|.+.|||.||+... .++....++++..+|.||++||.. .+|.|.|||||+.||||..
T Consensus 284 LwLvTdYHe~GSL~DyL~r~------------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk 351 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN------------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 351 (513)
T ss_pred EEEeeecccCCcHHHHHhhc------------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc
Confidence 78999999999999999864 588899999999999999999953 4688999999999999999
Q ss_pred CCcEEEeeecccccccccccccceeccccccccccccCcccCCC------CCCCccchHHHHHHHHHHHhC---------
Q 001974 815 DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS------EVSTNGDIYSYGILLLEMVTG--------- 879 (988)
Q Consensus 815 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg--------- 879 (988)
++++.|+|+|+|.................+||.+|||||++... ..-..+||||||.|+||+...
T Consensus 352 n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~ee 431 (513)
T KOG2052|consen 352 NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEE 431 (513)
T ss_pred CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehh
Confidence 99999999999987766543333344456899999999997653 122468999999999998763
Q ss_pred -CCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCC
Q 001974 880 -KKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDR 958 (988)
Q Consensus 880 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 958 (988)
+.||....+.|..+.+......-++.... -+..| ...++...+.++|+.||..+|..|
T Consensus 432 y~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~-------ipnrW--------------~s~~~l~~m~klMkeCW~~Np~aR 490 (513)
T KOG2052|consen 432 YQLPYYDVVPSDPSFEEMRKVVCVQKLRPN-------IPNRW--------------KSDPALRVMAKLMKECWYANPAAR 490 (513)
T ss_pred hcCCcccCCCCCCCHHHHhcceeecccCCC-------CCccc--------------ccCHHHHHHHHHHHHhhcCCchhh
Confidence 35676666666555443322211111111 11122 123456678999999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 001974 959 MSITNVVHELQSVKN 973 (988)
Q Consensus 959 Ps~~evl~~L~~i~~ 973 (988)
-||-.+.+.|.++.+
T Consensus 491 ltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 491 LTALRIKKTLAKLSN 505 (513)
T ss_pred hHHHHHHHHHHHHhc
Confidence 999999999999875
No 52
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-38 Score=344.00 Aligned_cols=244 Identities=24% Similarity=0.356 Sum_probs=202.9
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 736 (988)
..++|...++||+|+||+|++|+.+.+++.+|||++++.. ....+..+.|.+++... +||.++.++.+ |+.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----ccc
Confidence 4567999999999999999999999999999999998543 34567788899888877 69999999998 677
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
.++.++||||+.||++..+.+. +.+++..+.-+|..|+.||+|||++ +||+||||-+|||+|.+|
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~~~------------~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eG 505 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHIHT------------DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEG 505 (694)
T ss_pred CCeEEEEEEecCCCcEEEEEec------------ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccC
Confidence 7999999999999996555443 3689999999999999999999999 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
.+||+|||+++..-... ..+.++.||+.|||||++.+..|+.++|.|||||++|||+.|..||....+
T Consensus 506 h~kiADFGlcKe~m~~g----~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE-------- 573 (694)
T KOG0694|consen 506 HVKIADFGLCKEGMGQG----DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE-------- 573 (694)
T ss_pred cEEecccccccccCCCC----CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH--------
Confidence 99999999998543222 123456799999999999999999999999999999999999999873211
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI 961 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 961 (988)
.+++|..+.++ ..++..++.+...++++++..+|++|--+
T Consensus 574 ---------ee~FdsI~~d~----------------~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 574 ---------EEVFDSIVNDE----------------VRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---------HHHHHHHhcCC----------------CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 12222222222 12345677889999999999999999755
No 53
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=5e-41 Score=376.19 Aligned_cols=482 Identities=26% Similarity=0.321 Sum_probs=343.3
Q ss_pred EEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecCcccc
Q 001974 37 LNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKL 116 (988)
Q Consensus 37 l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i 116 (988)
+|++...++ .||..+..-..+..|+++.|-+-..+-+...+..+|+.||+++|++. ..|..+..+.+|+.|.++.|-|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 455666666 66766666666888888888776322233344555888888888888 7888888888888888888888
Q ss_pred cCCCcccccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCccchhh
Q 001974 117 MGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSI 196 (988)
Q Consensus 117 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l 196 (988)
. ..|.+..++.+|++|.|.+|++. ..|..+..+.+|+.|+++.|++. .+|..+..++.++.+..++|.-....
T Consensus 81 ~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~l---- 153 (1081)
T KOG0618|consen 81 R-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRL---- 153 (1081)
T ss_pred h-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhh----
Confidence 7 77778888888888888888887 77888888888888888888887 77778888888888888888222122
Q ss_pred ccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccccCCcccc
Q 001974 197 YNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFGGMKNLS 276 (988)
Q Consensus 197 ~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~ 276 (988)
+... ++.+++..|.+.+.++..+. .+.+ .|+|++|.+. --.+.++.+|+.|....|++..... .-++|+
T Consensus 154 g~~~-ik~~~l~~n~l~~~~~~~i~-~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~----~g~~l~ 222 (1081)
T KOG0618|consen 154 GQTS-IKKLDLRLNVLGGSFLIDIY-NLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI----SGPSLT 222 (1081)
T ss_pred cccc-chhhhhhhhhcccchhcchh-hhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe----cCcchh
Confidence 2222 77778888887776666554 2333 4888888776 2345667777888888877764332 246778
Q ss_pred EEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCCccccCCCcceE
Q 001974 277 YFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIPSGIGNLVGLYR 356 (988)
Q Consensus 277 ~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 356 (988)
.|+.++|.++..... ..-.+|+++++++|+++ .+|+++.... +|+.+...+|++. .+|..+..+++|+.
T Consensus 223 ~L~a~~n~l~~~~~~--------p~p~nl~~~dis~n~l~-~lp~wi~~~~-nle~l~~n~N~l~-~lp~ri~~~~~L~~ 291 (1081)
T KOG0618|consen 223 ALYADHNPLTTLDVH--------PVPLNLQYLDISHNNLS-NLPEWIGACA-NLEALNANHNRLV-ALPLRISRITSLVS 291 (1081)
T ss_pred eeeeccCcceeeccc--------cccccceeeecchhhhh-cchHHHHhcc-cceEecccchhHH-hhHHHHhhhhhHHH
Confidence 888888877743332 22356788888888887 6677776665 6888888888885 77777888888888
Q ss_pred EEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCC-CCCC-CCCEEEccccccccccccccccccccceeecCCC
Q 001974 357 LGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSL-GNLS-ILSELLLNNNSLSGVIPSCLGSLKQLAILHLFEN 434 (988)
Q Consensus 357 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 434 (988)
|.+.+|.+. -+|....++++|++|+|..|+|. .+|+.+ .-+. .|..|+.+.|++.....-.=..++.|+.|++.+|
T Consensus 292 l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN 369 (1081)
T KOG0618|consen 292 LSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANN 369 (1081)
T ss_pred HHhhhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcC
Confidence 888888887 66777777888888888888887 555533 2222 2666777777776322111224566788888888
Q ss_pred CCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccCCCCcEEEecCccccccCC
Q 001974 435 GLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMRGNFFHGSIP 514 (988)
Q Consensus 435 ~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 514 (988)
.++...-+-+-+...| +.|+|++|++.......+.++..|+.|+||+|+++ .+|..+..+..|+.|...+|+|. ..|
T Consensus 370 ~Ltd~c~p~l~~~~hL-KVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 370 HLTDSCFPVLVNFKHL-KVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred cccccchhhhccccce-eeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech
Confidence 8876666666677777 78888888887444455677888888888888888 77888888888888888888887 677
Q ss_pred ccccCccccCeeecCCCcccCcCccc-ccCCCCcEEeCCCCc
Q 001974 515 SSLSSLRAVLAIDLSRNNLSGLIPKF-LEDLSLEYLNLSFND 555 (988)
Q Consensus 515 ~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~l~l~~N~ 555 (988)
.+..+++|+.+|+|.|+|+...-.. ...++|++|||++|.
T Consensus 447 -e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 447 -ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred -hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 7788888888888888887544332 333678888888886
No 54
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-38 Score=340.55 Aligned_cols=252 Identities=24% Similarity=0.327 Sum_probs=211.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc-
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF- 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~- 739 (988)
++|+.++.+|+|+||.++.++++.+++.||+|.+..... ...+...+|+.++++++|||||.+.+.+. .++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~-----~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE-----EDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh-----cCCce
Confidence 579999999999999999999999999999999975443 33357889999999999999999999853 3455
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.+|||+|++||++.+.+.+.+. .-+++..+++|+.|++.|+.|||+. +|+|||||+.||+++.++.||
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~---------~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~Vk 146 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKG---------VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVK 146 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhh---------ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCcee
Confidence 9999999999999999987652 3688999999999999999999988 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||+|+........ ....+||+.||.||.+.+.+|..|+||||+||++|||++-+++|... +....+..
T Consensus 147 LgDfGlaK~l~~~~~~----a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-----~m~~Li~k 217 (426)
T KOG0589|consen 147 LGDFGLAKILNPEDSL----ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-----NMSELILK 217 (426)
T ss_pred ecchhhhhhcCCchhh----hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-----chHHHHHH
Confidence 9999999987765422 23467999999999999999999999999999999999999998732 11111111
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. +......+..+..++..++..|++.+|+.||++.+++.+
T Consensus 218 i~---------------------------~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 218 IN---------------------------RGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred Hh---------------------------hccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11 111112233566789999999999999999999999987
No 55
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=357.61 Aligned_cols=268 Identities=22% Similarity=0.263 Sum_probs=213.6
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcC-CCCceEEEeecccccccC--CC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQG--ND 738 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~--~~ 738 (988)
..++++.+.|.+|||+.||.|++...|..||+|++-..+....+.+.+|+++|++|+ |+|||.+++.+....... .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 445778899999999999999998777999999998777778889999999999995 999999999433221122 25
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
+++|.||||++|.|-+++..... ..+++.++++|+.|+++|+++||.. +++|||||||.+|||++.++..
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq---------~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~ 185 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQ---------TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNY 185 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHh---------ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCE
Confidence 67899999999999999975432 3699999999999999999999996 6789999999999999999999
Q ss_pred EEeeecccccccccccccce-----eccccccccccccCccc---CCCCCCCccchHHHHHHHHHHHhCCCCCCccccCC
Q 001974 819 HVGDFGLARVRQEVSNLTQS-----CSVGVRGTIGYAAPEYG---LGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGD 890 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~ 890 (988)
||||||.|.-.-........ .......|+.|+|||++ .+.+.++|+||||+||+||.|+....||+....-
T Consensus 186 KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l- 264 (738)
T KOG1989|consen 186 KLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL- 264 (738)
T ss_pred EeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-
Confidence 99999999743322211100 01123479999999975 4678899999999999999999999999843111
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
.+++..+. ......+...+.+||..||+.||.+||++.+|+..+.+
T Consensus 265 ----------------aIlng~Y~------------------~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 265 ----------------AILNGNYS------------------FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred ----------------eEEecccc------------------CCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 11111110 01113577889999999999999999999999999999
Q ss_pred HHHH
Q 001974 971 VKNA 974 (988)
Q Consensus 971 i~~~ 974 (988)
+...
T Consensus 311 l~~~ 314 (738)
T KOG1989|consen 311 LANK 314 (738)
T ss_pred HhcC
Confidence 8765
No 56
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-38 Score=322.81 Aligned_cols=248 Identities=23% Similarity=0.362 Sum_probs=207.9
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccch---hHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA---SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.+|++.+.||+|.||.|-+|.....|+.||||.++...-.. .-.+.+|+++|..++||||+.+|++ |++.+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCce
Confidence 46888899999999999999998899999999997554333 3457899999999999999999999 667799
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
+.|||||..+|.|++|+.+.+ .+++.++..+++||..|+.|+|.+ ++||||||-+|||+|.++++|
T Consensus 128 IvivMEYaS~GeLYDYiSer~-----------~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiK 193 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERG-----------SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIK 193 (668)
T ss_pred EEEEEEecCCccHHHHHHHhc-----------cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCee
Confidence 999999999999999998764 799999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCC-CCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEV-STNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||++-.+.......+ +.|++-|.+||++.+.+| ++.+|.||+||+||-++.|..||+.. +....++
T Consensus 194 IADFGLSNly~~~kfLqT-----FCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~lvr 263 (668)
T KOG0611|consen 194 IADFGLSNLYADKKFLQT-----FCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKRLVR 263 (668)
T ss_pred eeccchhhhhccccHHHH-----hcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHHHHH
Confidence 999999988766544443 459999999999999988 57899999999999999999999842 1111111
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
..-. +. -..++.|....-||++|+..+|++|.|+.||....
T Consensus 264 QIs~------------Ga-----------------YrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 264 QISR------------GA-----------------YREPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred Hhhc------------cc-----------------ccCCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 1000 00 01224556677899999999999999999987654
No 57
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.2e-38 Score=347.57 Aligned_cols=247 Identities=22% Similarity=0.287 Sum_probs=200.4
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
.++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.++++++||||+++++++. .++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQ-----DEN 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----cCC
Confidence 357899999999999999999999899999999986432 233457889999999999999999999854 457
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~ 157 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAG-----------RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHV 157 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCE
Confidence 8999999999999999987543 578888999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.... . ....
T Consensus 158 kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~----~-~~~~- 224 (329)
T PTZ00263 158 KVTDFGFAKKVPDRT-------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT----P-FRIY- 224 (329)
T ss_pred EEeeccCceEcCCCc-------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC----H-HHHH-
Confidence 999999998653321 12358999999999999999999999999999999999999985311 0 0000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC-----HHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS-----ITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 967 (988)
+.+.+ .....+..++..+.+++.+||+.||++||+ ++|+++.
T Consensus 225 ----~~i~~-----------------------~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 225 ----EKILA-----------------------GRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred ----HHHhc-----------------------CCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 00000 001112235567899999999999999997 5777643
No 58
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.6e-38 Score=321.35 Aligned_cols=281 Identities=25% Similarity=0.337 Sum_probs=211.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCC-ceEEEeeccccc-ccCCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRN-LVKVITSCSSID-FQGND 738 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~-~~~~~ 738 (988)
..|+.+++||+|+||+||+|+.+.+|+.||+|.++.... +......+|+.+++.++|+| |+++++++.... +....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 446677889999999999999999999999999985543 45678899999999999999 999999976531 12234
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++|+||+ .-+|..++....... +.++...++.++.||+.||+|||++ +|+||||||.||+|+++|.+
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~-------~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~l 159 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKP-------QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVL 159 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccc-------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcE
Confidence 788999999 789999998765321 2466688999999999999999999 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||+|+...-... .....++|..|+|||++.+. .|+...||||+||+++||+++++-|....+ .
T Consensus 160 KlaDFGlAra~~ip~~----~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se----~---- 227 (323)
T KOG0594|consen 160 KLADFGLARAFSIPMR----TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE----I---- 227 (323)
T ss_pred eeeccchHHHhcCCcc----cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH----H----
Confidence 9999999996543222 23345689999999999886 789999999999999999999988764322 1
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHH---hhhh-------hccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRL---RQAK-------INGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~---~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
++...++.-...+....|+....-.- .... ............+++.+|++++|++|.|++.++..
T Consensus 228 -----~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 228 -----DQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred -----HHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11222222222222333322211000 0000 00011222467899999999999999999999876
Q ss_pred --HHHH
Q 001974 968 --LQSV 971 (988)
Q Consensus 968 --L~~i 971 (988)
++.+
T Consensus 303 ~yf~~~ 308 (323)
T KOG0594|consen 303 PYFSEL 308 (323)
T ss_pred hhhccc
Confidence 5444
No 59
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-41 Score=374.35 Aligned_cols=484 Identities=26% Similarity=0.358 Sum_probs=414.4
Q ss_pred EEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccccCccccccccccccc
Q 001974 60 EINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSLYKLKQLAMQRNN 139 (988)
Q Consensus 60 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 139 (988)
.+|++..+++ .+|.-+..-..++.|+++.|.+....-....+.-+|+.|||++|+++ ..|..+..+.+|+.|+++.|.
T Consensus 2 ~vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~ 79 (1081)
T KOG0618|consen 2 HVDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNY 79 (1081)
T ss_pred CcccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhh
Confidence 4788889998 88888777777999999999888433333445556999999999998 899999999999999999999
Q ss_pred ccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCccchhhccccCccEEEeccCCCCCCCCCc
Q 001974 140 LTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLLANFSVPRNQFHGSLPPS 219 (988)
Q Consensus 140 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~lp~~ 219 (988)
|. ..|....++.+|++|.|.+|++. ..|..+..+++|++|+++.|++. .+|..+..++.++.+..++|.....++.
T Consensus 80 i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~- 155 (1081)
T KOG0618|consen 80 IR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ- 155 (1081)
T ss_pred Hh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc-
Confidence 99 78889999999999999999998 89999999999999999999999 8899999999999999999933223332
Q ss_pred ccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccccCCccccEEecccccCCCCCCCchhhhccc
Q 001974 220 LGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFGGMKNLSYFNVAYNNLGSGESDEMSFMNSL 299 (988)
Q Consensus 220 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l 299 (988)
..++.+++..|.+.+.++..+.++.. .|||.+|.+. ...+..+.+|+.+....|++.....
T Consensus 156 -----~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~--------- 216 (1081)
T KOG0618|consen 156 -----TSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI--------- 216 (1081)
T ss_pred -----ccchhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe---------
Confidence 23899999999999999998888887 8999999997 3456778999999999999976543
Q ss_pred ccCCCCcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCCccccCCCcceEEEeeCccCCCccCcccCCCCccC
Q 001974 300 ANCSNLRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIPSGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLE 379 (988)
Q Consensus 300 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 379 (988)
..++|+.|+.++|.++...+.. .+..|+++++++|+++ .+|++++.+.+|+.|++.+|+++ .+|..+..+++|+
T Consensus 217 -~g~~l~~L~a~~n~l~~~~~~p---~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~ 290 (1081)
T KOG0618|consen 217 -SGPSLTALYADHNPLTTLDVHP---VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLV 290 (1081)
T ss_pred -cCcchheeeeccCcceeecccc---ccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHH
Confidence 3578999999999998433332 3457999999999999 67799999999999999999997 8999999999999
Q ss_pred eEecccccCCCCCCCCCCCCCCCCEEEccccccccccccccccccc-cceeecCCCCCCccCchhhh-hhcccccceecc
Q 001974 380 GMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQ-LAILHLFENGLNGTIPEEIF-NLTYLSNSLNLA 457 (988)
Q Consensus 380 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~l~~N~l~~~~p~~~~-~l~~l~~~L~ls 457 (988)
.|.+.+|++. -+|.....++.|++|+|..|+|....+..|.-+.. |..|+.+.|++. ..|..-. ....| +.|.+.
T Consensus 291 ~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~L-q~Lyla 367 (1081)
T KOG0618|consen 291 SLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAAL-QELYLA 367 (1081)
T ss_pred HHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHH-HHHHHh
Confidence 9999999999 78888899999999999999999444434444433 889999999998 6664322 34445 899999
Q ss_pred cccccCCCccccccccccceeecCCcccccccC-cccccCCCCcEEEecCccccccCCccccCccccCeeecCCCcccCc
Q 001974 458 RNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIP-SQLGLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGL 536 (988)
Q Consensus 458 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 536 (988)
+|.++...-+.+.+.+.|+.|+|++|+|. .+| ..+.++..|++|+||+|+|+ .+|+++..+++|++|..-+|+|...
T Consensus 368 nN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~f 445 (1081)
T KOG0618|consen 368 NNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSF 445 (1081)
T ss_pred cCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeec
Confidence 99999888788999999999999999999 555 56789999999999999999 8999999999999999999999976
Q ss_pred CcccccCCCCcEEeCCCCcCcc-cCCCCcccCccccccccccccc
Q 001974 537 IPKFLEDLSLEYLNLSFNDLEG-EVPTKGVFANISRISVAGFNRL 580 (988)
Q Consensus 537 ~p~~~~~~~L~~l~l~~N~l~~-~~p~~~~~~~~~~~~~~~n~~l 580 (988)
| ....++.|+.+|||.|+|+. .+|....+++++-+.+.||.++
T Consensus 446 P-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 446 P-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred h-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 6 77888999999999999985 5555555578888889998864
No 60
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1e-37 Score=345.17 Aligned_cols=242 Identities=24% Similarity=0.306 Sum_probs=195.8
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
+.||+|+||.||+|++..+|+.||+|+++... ......+.+|+.++++++||||+++++++ ..++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 46999999999999999899999999997432 23345678899999999999999999885 44578999999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
|+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~ 141 (323)
T cd05571 76 YANGGELFFHLSRER-----------VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGL 141 (323)
T ss_pred CCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999986543 588999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhh
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHV 905 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (988)
++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... +..........
T Consensus 142 a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~-----~~~~~~~~~~~--- 209 (323)
T cd05571 142 CKEGISDGA----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHEKLFELILM--- 209 (323)
T ss_pred CcccccCCC----cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC-----CHHHHHHHHHc---
Confidence 875322111 112345899999999999999999999999999999999999998631 11111100000
Q ss_pred hhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHH
Q 001974 906 IDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVH 966 (988)
Q Consensus 906 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 966 (988)
.....+...+.++.+++.+||+.||++|| ++.++++
T Consensus 210 -------------------------~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 210 -------------------------EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -------------------------CCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 00112235677899999999999999999 7888875
No 61
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.5e-37 Score=336.33 Aligned_cols=273 Identities=25% Similarity=0.335 Sum_probs=200.3
Q ss_pred CCCCCCceeccccceeEEEEEECC-CCeEEEEEEeeccc--cchhHHHHHHHHHHHhc---CCCCceEEEeecccccccC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQ-DGTIVAIKVFNLQR--HGASKSFLAECKALKNI---RHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~ 736 (988)
++|++.+.||+|+||.||+|++.. +++.||+|+++... ......+.+|+.+++.+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999854 46889999986432 22234566787777766 6999999999986443445
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
....++||||++ ++|.+++..... ..+++.+++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~---------~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE---------PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSG 147 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCC
Confidence 567899999995 799998865432 2578999999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
.+||+|||+++...... ......|++.|+|||++.+..++.++|||||||++|||++|++||...... .....
T Consensus 148 ~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~--~~~~~ 220 (290)
T cd07862 148 QIKLADFGLARIYSFQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV--DQLGK 220 (290)
T ss_pred CEEEccccceEeccCCc-----ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH--HHHHH
Confidence 99999999997654321 122345899999999998889999999999999999999999998742111 10000
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhH---HH----HhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNK---QR----LRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. ++........+|..... .. ............+..+.+++.+|++.||++|||+.|+++
T Consensus 221 i-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 221 I-----------LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred H-----------HHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0 00000001111111000 00 000000111246677899999999999999999999985
No 62
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.8e-37 Score=332.20 Aligned_cols=257 Identities=21% Similarity=0.381 Sum_probs=203.3
Q ss_pred hCCCCCCceeccccceeEEEEEEC---CCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFD---QDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~---~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.++|++.+.||+|+||.||+|.+. ..+..||+|+++.... .....+.+|+.++++++||||+++++++. .+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cC
Confidence 356889999999999999999874 3467899999875432 33457889999999999999999999854 34
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~----------~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~ 145 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE----------GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLV 145 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCc
Confidence 78999999999999999987543 2688999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
+|++|||.+......... ......++..|+|||.+.+..++.++|||||||++||+++ |+.||...... ..
T Consensus 146 ~~l~dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~-----~~ 217 (266)
T cd05064 146 CKISGFRRLQEDKSEAIY---TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ-----DV 217 (266)
T ss_pred EEECCCcccccccccchh---cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HH
Confidence 999999987653221111 1112235678999999999999999999999999999875 99998632110 00
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
.. .+. +. .....+..+|..+.+++.+||+.+|++||+++||.+.|+++
T Consensus 218 ~~-----~~~---~~-------------------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 218 IK-----AVE---DG-------------------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HH-----HHH---CC-------------------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00 000 00 00112235778899999999999999999999999998764
No 63
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.6e-37 Score=338.39 Aligned_cols=273 Identities=21% Similarity=0.365 Sum_probs=203.0
Q ss_pred hCCCCCCceeccccceeEEEEEECC----------------CCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQ----------------DGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVK 724 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~----------------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 724 (988)
.++|++.++||+|+||.||+|.+.. ++..||+|+++.... ....++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578999999999999999998632 344799999875432 23457899999999999999999
Q ss_pred EEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchh--------hhHhhcCCHHHHHHHHHHHHHHHHHHHcCC
Q 001974 725 VITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDV--------EIEIQKLTLLQRINIAIDVASAIDYLHHHC 796 (988)
Q Consensus 725 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~--------~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~ 796 (988)
+++++.. .+..++||||+++|+|.+++.......... ......+++.++..++.||+.||+|||+.
T Consensus 84 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~- 157 (304)
T cd05096 84 LLGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL- 157 (304)
T ss_pred EEEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence 9999643 467899999999999999986533211100 01113578899999999999999999998
Q ss_pred CCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHH
Q 001974 797 QEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEM 876 (988)
Q Consensus 797 ~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~el 876 (988)
+|+||||||+||++++++.+||+|||+++........ .......++..|+|||++.+..++.++||||||+++|||
T Consensus 158 --~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 233 (304)
T cd05096 158 --NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY--RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEI 233 (304)
T ss_pred --CccccCcchhheEEcCCccEEECCCccceecccCcee--EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence 9999999999999999999999999999765332211 111223457899999999888999999999999999999
Q ss_pred Hh--CCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcC
Q 001974 877 VT--GKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVES 954 (988)
Q Consensus 877 lt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 954 (988)
++ +..||...... .....+........ .......+..++..+.+++.+||+.|
T Consensus 234 ~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~li~~cl~~~ 288 (304)
T cd05096 234 LMLCKEQPYGELTDE--QVIENAGEFFRDQG-----------------------RQVYLFRPPPCPQGLYELMLQCWSRD 288 (304)
T ss_pred HHccCCCCCCcCCHH--HHHHHHHHHhhhcc-----------------------ccccccCCCCCCHHHHHHHHHHccCC
Confidence 87 55666532111 11111100000000 00001123357788999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 001974 955 PQDRMSITNVVHELQ 969 (988)
Q Consensus 955 P~~RPs~~evl~~L~ 969 (988)
|++|||+.||.+.|+
T Consensus 289 p~~RPs~~~i~~~l~ 303 (304)
T cd05096 289 CRERPSFSDIHAFLT 303 (304)
T ss_pred chhCcCHHHHHHHHh
Confidence 999999999998875
No 64
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-37 Score=340.11 Aligned_cols=279 Identities=25% Similarity=0.349 Sum_probs=199.6
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.+++.++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIH-----TKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEe-----cCCeE
Confidence 5789999999999999999999998999999999864432 23356788999999999999999999854 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+ .++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||
T Consensus 79 ~lv~e~~-~~~l~~~~~~~~----------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl 144 (303)
T cd07869 79 TLVFEYV-HTDLCQYMDKHP----------GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKL 144 (303)
T ss_pred EEEEECC-CcCHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEE
Confidence 9999999 578888876543 2578889999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||+++....... ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.........+......
T Consensus 145 ~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 220 (303)
T cd07869 145 ADFGLARAKSVPSH----TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV 220 (303)
T ss_pred CCCCcceeccCCCc----cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHH
Confidence 99999875432211 1122457899999998865 457889999999999999999999987432111001000000
Q ss_pred HHhhhhhhhhc---cccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDHVIDIVD---PILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
......+... .........+........... ......+..+.+++.+|++.||++|||++|+++
T Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 221 -LGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQA--WNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred -hCCCChhhccchhhccccccccccccCCccHHHH--hhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000000000 000000000000000000000 011124567889999999999999999999986
No 65
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.1e-37 Score=341.55 Aligned_cols=281 Identities=20% Similarity=0.294 Sum_probs=206.3
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.++|++.+.||+|+||.||+|++..++..||+|+++.... ...+.+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEE
Confidence 4689999999999999999999999999999999875432 33467899999999999999999999854 34789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl 145 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK-----------RIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKL 145 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEE
Confidence 99999999999999986543 578899999999999999999985 26999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||++....... .....|+..|+|||++.+..++.++|||||||++|||++|+.||...... .+.......
T Consensus 146 ~Dfg~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~ 217 (331)
T cd06649 146 CDFGVSGQLIDSM------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRP 217 (331)
T ss_pred ccCcccccccccc------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhccc
Confidence 9999987553321 12345899999999999999999999999999999999999998632111 111111000
Q ss_pred Hhhhhh---hhhccccc--------cCcchhhhh-hHHHHh---hh-hhc-cccchhHHHHHHhhcccCcCCCCCCCHHH
Q 001974 901 LLDHVI---DIVDPILI--------NDVEDWDAT-NKQRLR---QA-KIN-GKIECPISMVRIGVACSVESPQDRMSITN 963 (988)
Q Consensus 901 ~~~~~~---~~~d~~l~--------~~~~~~~~~-~~~~~~---~~-~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~e 963 (988)
..+... ....+... ......... ...... .. ... ....++.++.+++.+||+.||++|||++|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~e 297 (331)
T cd06649 218 VVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKM 297 (331)
T ss_pred ccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHH
Confidence 000000 00000000 000000000 000000 00 000 01235678999999999999999999999
Q ss_pred HHHHH
Q 001974 964 VVHEL 968 (988)
Q Consensus 964 vl~~L 968 (988)
+++.-
T Consensus 298 ll~h~ 302 (331)
T cd06649 298 LMNHT 302 (331)
T ss_pred HhcCh
Confidence 98763
No 66
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=308.33 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=202.9
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.+.|++-+.||+|.|+.||++.+..+|+.+|+|++... .....+++.+|+++.+.++||||+++.+. +.....
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcccce
Confidence 46788889999999999999999999999999998532 23356789999999999999999999988 455688
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC---CC
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN---DM 816 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~ 816 (988)
.++|+|+|.|++|..-+-.. .-+++..+-.+++||++||.|+|.. +|||||+||+|+++.. .-
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R-----------~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A 150 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAR-----------EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGA 150 (355)
T ss_pred eEEEEecccchHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCC
Confidence 99999999999997555322 3578889999999999999999999 9999999999999953 33
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
-+||+|||+|...... ....+.+||++|||||++...+|+..+|||+.||++|-++.|.+||.....
T Consensus 151 ~vKL~~FGvAi~l~~g-----~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-------- 217 (355)
T KOG0033|consen 151 AVKLADFGLAIEVNDG-----EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-------- 217 (355)
T ss_pred ceeecccceEEEeCCc-----cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH--------
Confidence 6999999999987632 223457899999999999999999999999999999999999999863110
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..+.+++.. ....-+.+.| ..+.++..+|+.+|+..||++|.|+.|.++
T Consensus 218 --~rlye~I~~---g~yd~~~~~w----------------~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 218 --HRLYEQIKA---GAYDYPSPEW----------------DTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred --HHHHHHHhc---cccCCCCccc----------------CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 111122111 0111111222 356778899999999999999999998774
No 67
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.6e-37 Score=347.74 Aligned_cols=272 Identities=24% Similarity=0.361 Sum_probs=205.9
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCC-----CeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQD-----GTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSI 732 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 732 (988)
...++|++.+.||+|+||.||+|++... +..||+|+++... ....+.+.+|+++++.+ +|+||++++++|..
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~- 113 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTH- 113 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecC-
Confidence 3456799999999999999999986433 3579999997443 23345688999999999 89999999998643
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCC-------------------------------------------------
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQ------------------------------------------------- 763 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------------- 763 (988)
++..++||||+++|+|.+++.......
T Consensus 114 ----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (374)
T cd05106 114 ----GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSS 189 (374)
T ss_pred ----CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccc
Confidence 478899999999999999986432100
Q ss_pred ----------chhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccc
Q 001974 764 ----------KDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVS 833 (988)
Q Consensus 764 ----------~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 833 (988)
........++++.++++|+.||+.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~ 266 (374)
T cd05106 190 SSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS 266 (374)
T ss_pred cccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCc
Confidence 00000113578899999999999999999998 99999999999999999999999999997654322
Q ss_pred cccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhhhhhccc
Q 001974 834 NLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPI 912 (988)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 912 (988)
.. .......++..|+|||++.+..++.++|||||||++|||++ |+.||....... .+... ....
T Consensus 267 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~------------~~~~ 331 (374)
T cd05106 267 NY--VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKM------------VKRG 331 (374)
T ss_pred ce--eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHH------------HHcc
Confidence 11 11112235678999999998899999999999999999997 999986432110 00000 0000
Q ss_pred cccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 913 LINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 913 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
. ....+...++++.+++.+||+.||++|||+.++++.|+++.
T Consensus 332 ~------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 332 Y------------------QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred c------------------CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 0 00111235678999999999999999999999999998863
No 68
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.6e-37 Score=336.81 Aligned_cols=276 Identities=22% Similarity=0.269 Sum_probs=200.7
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|++.+.||+|+||.||+|+++.+++.||+|+++... ....+.+.+|+.++++++||||+++++++. .++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR-----RRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe-----cCCEE
Confidence 46999999999999999999999899999999987432 233467889999999999999999998853 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++++.+..+.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~lv~e~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl 141 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMP-----------NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKL 141 (287)
T ss_pred EEEEecCCCCHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEE
Confidence 9999999887776554322 2588899999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||++......... ......|+..|+|||++.+..++.++||||+||++|||++|+.||......+ .... ....
T Consensus 142 ~Dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~-~~~~ 216 (287)
T cd07848 142 CDFGFARNLSEGSNA---NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFT-IQKV 216 (287)
T ss_pred eeccCcccccccccc---cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHh
Confidence 999999865432211 1123458999999999999899999999999999999999999986421111 0000 0000
Q ss_pred Hhh----hhhhh-hccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 901 LLD----HVIDI-VDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 901 ~~~----~~~~~-~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... ..... .++.... ..+... ..............+.++.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 217 LGPLPAEQMKLFYSNPRFHG--LRFPAV--NHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hCCCCHHHHHhhhccchhcc--cccCcc--cCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 00000 0000000 000000 00000000111235678999999999999999999999875
No 69
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.8e-37 Score=335.09 Aligned_cols=278 Identities=23% Similarity=0.315 Sum_probs=200.4
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.++|++.++||+|+||.||+|+...+++.||+|+++.... .....+.+|++++++++||||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~ 78 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIH-----TERCL 78 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEc-----CCCeE
Confidence 3579999999999999999999998999999999874432 23456789999999999999999999853 44778
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++ ++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||
T Consensus 79 ~lv~e~~~-~~l~~~l~~~~----------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl 144 (288)
T cd07871 79 TLVFEYLD-SDLKQYLDNCG----------NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKL 144 (288)
T ss_pred EEEEeCCC-cCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEE
Confidence 99999996 59998886543 2578889999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||+++....... ......+++.|+|||++.+ ..++.++||||+||++|||+||+.||...... ........
T Consensus 145 ~DfG~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~--~~~~~~~~ 218 (288)
T cd07871 145 ADFGLARAKSVPTK----TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK--EELHLIFR 218 (288)
T ss_pred CcCcceeeccCCCc----cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHH
Confidence 99999975432211 1123457899999998865 56899999999999999999999998632111 00000100
Q ss_pred HHhhhhhhhhccccccCcchhhhhh-HHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATN-KQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.......+...... ..+.+.... ...............+.+..+++.+|++.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 219 LLGTPTEETWPGIT--SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HhCCCChHHhhccc--cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 01000001000000 000000000 000000001112245667899999999999999999999975
No 70
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.6e-37 Score=345.50 Aligned_cols=269 Identities=23% Similarity=0.367 Sum_probs=204.3
Q ss_pred hCCCCCCceeccccceeEEEEEE-----CCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAF-----DQDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDF 734 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 734 (988)
.++|++.+.||+|+||.||+|++ ..++..||||+++... ....+.+.+|+++++.+ +||||++++++|..
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~--- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTV--- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeecc---
Confidence 45789999999999999999975 3356789999986433 23346788999999999 89999999999644
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCch-------------------------------------------------
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKD------------------------------------------------- 765 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~------------------------------------------------- 765 (988)
++..++||||+++|+|.+++.........
T Consensus 111 --~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 111 --GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred --CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 47789999999999999999654311000
Q ss_pred ---------------hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeeccccccc
Q 001974 766 ---------------VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQ 830 (988)
Q Consensus 766 ---------------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 830 (988)
.......+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 000112578999999999999999999998 99999999999999999999999999998654
Q ss_pred ccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhhhhh
Q 001974 831 EVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVIDIV 909 (988)
Q Consensus 831 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (988)
...... ......++..|+|||++.+..++.++|||||||++|||++ |..||....... ..... +...
T Consensus 266 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~----~~~~----- 333 (375)
T cd05104 266 NDSNYV--VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKM----IKEG----- 333 (375)
T ss_pred Cccccc--ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHH----HHhC-----
Confidence 332211 1112235678999999999999999999999999999998 888886421110 00000 0000
Q ss_pred ccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 910 DPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 910 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
. ....+...+.++.+++.+||+.||++|||++||++.|++.
T Consensus 334 ---~------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 334 ---Y------------------RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ---c------------------cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0 0011123567899999999999999999999999999863
No 71
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.4e-37 Score=344.08 Aligned_cols=254 Identities=20% Similarity=0.265 Sum_probs=202.9
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++..++||||+++++++. .++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~-----~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ-----DDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE-----cCCE
Confidence 36899999999999999999999889999999997432 233456889999999999999999999854 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~-----------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~k 141 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG-----------VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIK 141 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEE
Confidence 999999999999999996543 578899999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....
T Consensus 142 L~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-----~~~~~ 209 (333)
T cd05600 142 LTDFGLSKGIVT-------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN-----ETWEN 209 (333)
T ss_pred EEeCcCCccccc-------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH-----HHHHH
Confidence 999999975533 122346899999999999999999999999999999999999998632111 11000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
. .. ....... . .+ ......++.++.+++.+||..+|++||+++|+++.
T Consensus 210 i-~~-~~~~~~~---~---~~------------~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 210 L-KY-WKETLQR---P---VY------------DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred H-Hh-ccccccC---C---CC------------CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0 00 0000000 0 00 00012456788999999999999999999999865
No 72
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=4.8e-37 Score=339.54 Aligned_cols=242 Identities=23% Similarity=0.298 Sum_probs=194.7
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
+.||+|+||.||+|+...+|+.||+|+++... ......+.+|+++++.++||||+++++++. .++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~-----~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ-----THDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCEEEEEEe
Confidence 46999999999999999899999999997432 233456778999999999999999998854 4578999999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
|+++|+|..++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 141 (323)
T cd05595 76 YANGGELFFHLSRER-----------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGL 141 (323)
T ss_pred CCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHH
Confidence 999999998886543 588999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhh
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHV 905 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (988)
+........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........
T Consensus 142 ~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~~~~--- 209 (323)
T cd05595 142 CKEGISDGA----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELILM--- 209 (323)
T ss_pred hccccCCCC----ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHhc---
Confidence 874322111 11234589999999999999999999999999999999999999863211 000000000
Q ss_pred hhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHH
Q 001974 906 IDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVH 966 (988)
Q Consensus 906 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 966 (988)
.....+..+++++.+++.+||+.||++|| ++.++++
T Consensus 210 -------------------------~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 210 -------------------------EEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -------------------------CCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 00112235677899999999999999998 8888875
No 73
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=343.25 Aligned_cols=247 Identities=24% Similarity=0.315 Sum_probs=199.2
Q ss_pred hCCCCCCceeccccceeEEEEEECCCC-eEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDG-TIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~-~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.++|++.+.||+|+||.||+|.+..++ ..||+|++... .....+.+.+|+++++.++||||+++++++. ++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~ 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-----DE 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-----eC
Confidence 456999999999999999999876554 68999998643 2233457889999999999999999999954 45
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~-----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ 169 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNK-----------RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGF 169 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCC
Confidence 78999999999999999987543 588899999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 170 ikL~DFG~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~ 237 (340)
T PTZ00426 170 IKMTDFGFAKVVDTR-------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-----LLIY 237 (340)
T ss_pred EEEecCCCCeecCCC-------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-----HHHH
Confidence 999999999865321 1224589999999999998899999999999999999999999863210 0000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
..+. ......+...+..+.+++.+|++.||++|+ +++|+++.
T Consensus 238 -----~~i~-----------------------~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 238 -----QKIL-----------------------EGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----HHHh-----------------------cCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0000 000111234566789999999999999995 88888764
No 74
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.5e-37 Score=339.19 Aligned_cols=240 Identities=25% Similarity=0.327 Sum_probs=193.0
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
||+|+||.||+|++..+++.||+|+++.. .......+.+|+.++++++||||+++++++. .++..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ-----SPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----cCCeEEEEEcCC
Confidence 69999999999999989999999998643 2233456788999999999999999998854 457899999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 76 ~~g~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~ 141 (312)
T cd05585 76 NGGELFHHLQREG-----------RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCK 141 (312)
T ss_pred CCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccc
Confidence 9999999986543 588999999999999999999998 99999999999999999999999999997
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVID 907 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (988)
....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||... ...........
T Consensus 142 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~~~~~~~----- 207 (312)
T cd05585 142 LNMKDDD----KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEMYRKILQ----- 207 (312)
T ss_pred cCccCCC----ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHHHHHHHc-----
Confidence 5322211 122346899999999999999999999999999999999999998632 11111111000
Q ss_pred hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC---HHHHHH
Q 001974 908 IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS---ITNVVH 966 (988)
Q Consensus 908 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 966 (988)
.....+...++++.+++.+||+.||++||+ +.|+++
T Consensus 208 -----------------------~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 208 -----------------------EPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred -----------------------CCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 011122356678999999999999999985 556554
No 75
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.1e-37 Score=343.40 Aligned_cols=249 Identities=25% Similarity=0.371 Sum_probs=194.2
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|+..+.||+|+||.||+|++..+++.||+|++..... ...+.+.+|+++++.++|+||+++++++ ..++..+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeEE
Confidence 346677899999999999999988999999999864432 3346788999999999999999999985 3457899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+.. ...+..+..++.||+.||+|||+. +|+||||||+||++++++.+||+
T Consensus 149 lv~e~~~~~~L~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~ 210 (353)
T PLN00034 149 VLLEFMDGGSLEGTH---------------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIA 210 (353)
T ss_pred EEEecCCCCcccccc---------------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEc
Confidence 999999999986532 345667888999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCC-----CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-----SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
|||+++....... ......||..|+|||++.. ...+.++|||||||++|||++|+.||...... .+...
T Consensus 211 DfG~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~ 284 (353)
T PLN00034 211 DFGVSRILAQTMD----PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASL 284 (353)
T ss_pred ccccceecccccc----cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHH
Confidence 9999986543211 1123468999999998743 23456899999999999999999998732111 11111
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
...... .........++.++.+++.+||+.||++|||+.|+++.
T Consensus 285 ~~~~~~---------------------------~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 285 MCAICM---------------------------SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHHHhc---------------------------cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 110000 00011223567789999999999999999999999874
No 76
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.4e-39 Score=347.16 Aligned_cols=387 Identities=26% Similarity=0.404 Sum_probs=267.5
Q ss_pred CCCCCCEEEcCCCccc-ccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccccCcccccc
Q 001974 54 NLSFLREINLMNNSIQ-GEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSLYKLKQ 132 (988)
Q Consensus 54 ~l~~L~~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 132 (988)
-|+..+-.|+++|.++ +..|.....+++++.|.|...++. .+|..++.|.+|++|.+++|++. .+-+++..|+.|+.
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 3455666666666666 356666666666666666666666 55555555555555555555554 44455555555555
Q ss_pred cccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCccchhhccccCccEEEeccCCC
Q 001974 133 LAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLLANFSVPRNQF 212 (988)
Q Consensus 133 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i 212 (988)
+.+.+|++.. .-+|..+.+|..|+.||||+|++. ..|..+....++-.|+||+|+|
T Consensus 83 v~~R~N~LKn-----------------------sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~I 138 (1255)
T KOG0444|consen 83 VIVRDNNLKN-----------------------SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNI 138 (1255)
T ss_pred Hhhhcccccc-----------------------CCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcc
Confidence 5555555541 124555556666666666666666 5566666666666666666666
Q ss_pred CCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccccCCccccEEecccccCCCCCCCc
Q 001974 213 HGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFGGMKNLSYFNVAYNNLGSGESDE 292 (988)
Q Consensus 213 ~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 292 (988)
. +||..+|.+++.|-.||||+|++... |.....+..|++|+|++|.+.
T Consensus 139 e-tIPn~lfinLtDLLfLDLS~NrLe~L-------------------------PPQ~RRL~~LqtL~Ls~NPL~------ 186 (1255)
T KOG0444|consen 139 E-TIPNSLFINLTDLLFLDLSNNRLEML-------------------------PPQIRRLSMLQTLKLSNNPLN------ 186 (1255)
T ss_pred c-cCCchHHHhhHhHhhhccccchhhhc-------------------------CHHHHHHhhhhhhhcCCChhh------
Confidence 6 77777776666666666666655521 112222333333333333331
Q ss_pred hhhhcccccCCCCcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCCccccCCCcceEEEeeCccCC-CccCcc
Q 001974 293 MSFMNSLANCSNLRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIPSGIGNLVGLYRLGMGGNQFT-GTIPKE 371 (988)
Q Consensus 293 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~ 371 (988)
..--..+..|++|..|++++.+=+ ..+|.+
T Consensus 187 -------------------------------------------------hfQLrQLPsmtsL~vLhms~TqRTl~N~Pts 217 (1255)
T KOG0444|consen 187 -------------------------------------------------HFQLRQLPSMTSLSVLHMSNTQRTLDNIPTS 217 (1255)
T ss_pred -------------------------------------------------HHHHhcCccchhhhhhhcccccchhhcCCCc
Confidence 111112334566667777765443 357888
Q ss_pred cCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEccccccccccccccccccccceeecCCCCCCccCchhhhhhcccc
Q 001974 372 MGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLS 451 (988)
Q Consensus 372 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~ 451 (988)
+..+.+|..+|||.|.+. .+|+.+.++++|+.|+||+|+|+ .+....+...+|+.|+||+|+++ .+|..++.+++|
T Consensus 218 ld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL- 293 (1255)
T KOG0444|consen 218 LDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKL- 293 (1255)
T ss_pred hhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHH-
Confidence 888888888888888888 78888888888888888888888 56666778888999999999998 889999999988
Q ss_pred cceeccccccc-CCCccccccccccceeecCCcccccccCcccccCCCCcEEEecCccccccCCccccCccccCeeecCC
Q 001974 452 NSLNLARNHLV-GSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSR 530 (988)
Q Consensus 452 ~~L~ls~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 530 (988)
+.|.+.+|+++ .-+|..++.|.+|+++..++|.+. .+|+.++.|..|+.|.|++|+|. .+|+.+.-|+.|+.|||.+
T Consensus 294 ~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlre 371 (1255)
T KOG0444|consen 294 TKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRE 371 (1255)
T ss_pred HHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccC
Confidence 88888888876 247999999999999999999999 89999999999999999999999 8999999999999999999
Q ss_pred CcccCcCcccccC-CCCcEEeCCC
Q 001974 531 NNLSGLIPKFLED-LSLEYLNLSF 553 (988)
Q Consensus 531 N~l~~~~p~~~~~-~~L~~l~l~~ 553 (988)
|.=-.-+|+...- .+|+.-++..
T Consensus 372 NpnLVMPPKP~da~~~lefYNIDF 395 (1255)
T KOG0444|consen 372 NPNLVMPPKPNDARKKLEFYNIDF 395 (1255)
T ss_pred CcCccCCCCcchhhhcceeeecce
Confidence 9876667665322 3566655443
No 77
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=6.5e-37 Score=339.00 Aligned_cols=243 Identities=24% Similarity=0.316 Sum_probs=196.0
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
+.||+|+||.||+|++..+++.||+|++.... ......+.+|+++++.++||||+++++++ ..++..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 46899999999999999899999999997432 23345788899999999999999999884 44588999999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
|+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 y~~~g~L~~~l~~~~-----------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~ 141 (328)
T cd05593 76 YVNGGELFFHLSRER-----------VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGL 141 (328)
T ss_pred CCCCCCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcC
Confidence 999999998886543 588999999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhh
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHV 905 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (988)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..........
T Consensus 142 ~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-----~~~~~~~~~~--- 209 (328)
T cd05593 142 CKEGITDAA----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILM--- 209 (328)
T ss_pred CccCCCccc----ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-----HHHHHHHhcc---
Confidence 875322111 1123458999999999999999999999999999999999999986321 1111100000
Q ss_pred hhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 906 IDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 906 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
.....+...+.++.+++.+||+.||++|| ++.|+++.
T Consensus 210 -------------------------~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 210 -------------------------EDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -------------------------CCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 00111234667889999999999999997 89998864
No 78
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-36 Score=335.84 Aligned_cols=260 Identities=23% Similarity=0.407 Sum_probs=205.7
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCe----EEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGT----IVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
..+|+..+.||+|+||.||+|++..+++ .||+|+++... ....+++.+|+.+++.++||||++++++|..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~----- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-----
Confidence 3569999999999999999999865555 38999986433 3445678899999999999999999999753
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
+..++|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||++++++
T Consensus 81 -~~~~~v~e~~~~g~l~~~l~~~~----------~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~ 146 (316)
T cd05108 81 -STVQLITQLMPFGCLLDYVREHK----------DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQ 146 (316)
T ss_pred -CCceeeeecCCCCCHHHHHHhcc----------ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCC
Confidence 34679999999999999987653 2578889999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 895 (988)
.+||+|||+++......... ...+..++..|+|||++.+..++.++|||||||++|||++ |+.||+.... ..
T Consensus 147 ~~kl~DfG~a~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~-----~~ 219 (316)
T cd05108 147 HVKITDFGLAKLLGADEKEY--HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SE 219 (316)
T ss_pred cEEEccccccccccCCCcce--eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HH
Confidence 99999999998654332211 1112234678999999999999999999999999999998 9999863211 01
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
.. ...... .....+..++.++.+++.+||+.+|++||++.+++..+.++...
T Consensus 220 ~~---------~~~~~~------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 220 IS---------SILEKG------------------ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred HH---------HHHhCC------------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 00 000000 00111234667789999999999999999999999999888654
No 79
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-38 Score=338.97 Aligned_cols=247 Identities=23% Similarity=0.354 Sum_probs=205.3
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeecc
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMT 748 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~ 748 (988)
-+||+|.||+||.|++..+...+|||.+...+....+-+..|+..-+.++|.|||+++|.|.+ +++.-|.||.++
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~se-----nGf~kIFMEqVP 655 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSE-----NGFFKIFMEQVP 655 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCC-----CCeEEEEeecCC
Confidence 379999999999999999999999999987777777889999999999999999999999654 478899999999
Q ss_pred ccchhhhcCCCCCCCchhhhHhhcC--CHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC-CCCcEEEeeecc
Q 001974 749 NGSLENWLHPDAVPQKDVEIEIQKL--TLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD-NDMIAHVGDFGL 825 (988)
Q Consensus 749 ~gsL~~~l~~~~~~~~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~DfG~ 825 (988)
||+|.++++..-. ++ .+..+-.+.+||++||.|||+. .|||||||-+||+|+ -.|.+||+|||.
T Consensus 656 GGSLSsLLrskWG----------PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGT 722 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWG----------PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGT 722 (1226)
T ss_pred CCcHHHHHHhccC----------CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEeccccc
Confidence 9999999986643 44 6778888999999999999999 999999999999995 678999999999
Q ss_pred cccccccccccceeccccccccccccCcccCCC--CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhh
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS--EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
++...... .++.++.||..|||||++..+ .|+.++|||||||++.||.||++||.........
T Consensus 723 sKRLAgin----P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA----------- 787 (1226)
T KOG4279|consen 723 SKRLAGIN----PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA----------- 787 (1226)
T ss_pred chhhccCC----ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh-----------
Confidence 98776543 344557799999999999875 5889999999999999999999998754222100
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+ .+..+....+..+.+...+...+|.+|+.+||.+||+|++++..
T Consensus 788 ----M---------------FkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 788 ----M---------------FKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred ----h---------------hhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 0 00111112223455677788999999999999999999999853
No 80
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-36 Score=343.18 Aligned_cols=194 Identities=25% Similarity=0.351 Sum_probs=167.6
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
..+|++.+.||+|+||.||+|.+..+++.||+|... ...+.+|++++++++||||+++++++. .+...+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFT-----YNKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeE
Confidence 467999999999999999999999999999999753 245678999999999999999999854 457889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|+|++ +++|.+++.... .+++.+++.++.||+.||+|||+. +||||||||+||+++.++.+||+
T Consensus 160 lv~e~~-~~~L~~~l~~~~-----------~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~ 224 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAKR-----------NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLG 224 (391)
T ss_pred EEEecC-CCCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEE
Confidence 999999 578988886542 578999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTD 884 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~ 884 (988)
|||+|+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||-
T Consensus 225 DFG~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 225 DFGAACFPVDINA---NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred eCCcccccccccc---cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 9999975332211 11223569999999999999999999999999999999999998864
No 81
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.6e-36 Score=325.87 Aligned_cols=256 Identities=26% Similarity=0.469 Sum_probs=205.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
.+|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+.+|++++++++||||+++++++.. ++..++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-----EPPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcC-----CCCcEE
Confidence 4578889999999999999999888999999998643 3345678999999999999999999998643 477899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++..... ..+++..++.++.|+++||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~---------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~d 147 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNR---------QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVAD 147 (263)
T ss_pred EEEeCCCCcHHHHHHhCCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCC
Confidence 9999999999999865432 3578899999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.+........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||... ........
T Consensus 148 f~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~-----~~~~~~~~-- 217 (263)
T cd05052 148 FGLSRLMTGDTY---TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYEL-- 217 (263)
T ss_pred Ccccccccccee---eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH--
Confidence 999986543221 11112234668999999998899999999999999999998 99997532 11111000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
+.. . .....+..++.++.+++.+||+.||++|||+.|+++.|+.+
T Consensus 218 ---~~~----~------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 218 ---LEK----G------------------YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---HHC----C------------------CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 000 0 01112235678899999999999999999999999999875
No 82
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=4.5e-37 Score=328.80 Aligned_cols=251 Identities=31% Similarity=0.531 Sum_probs=193.6
Q ss_pred CCceeccccceeEEEEEEC----CCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 667 STHLIGMGSFGSVYKGAFD----QDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 667 ~~~~lg~G~~g~Vy~a~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
..+.||.|.||.||+|.+. ..+..|+||+++.... ...+.+.+|++.+++++||||++++|+|.. .+..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-----~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-----NEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-----SSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-----ccccc
Confidence 4578999999999999997 3457899999965433 336789999999999999999999999763 36689
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++|+|.+++..... ..+++.++..|+.||+.||+|||+. +++||||+++||++++++.+||+
T Consensus 78 lv~e~~~~g~L~~~L~~~~~---------~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~ 145 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNK---------EPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLS 145 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCT---------TTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEE
T ss_pred cccccccccccccccccccc---------ccccccccccccccccccccccccc---ccccccccccccccccccccccc
Confidence 99999999999999987621 3689999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||++......... ...........|+|||.+.+..++.++||||||+++||+++ |+.||..... .......
T Consensus 146 ~f~~~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-----~~~~~~~ 218 (259)
T PF07714_consen 146 DFGLSRPISEKSKY--KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-----EEIIEKL 218 (259)
T ss_dssp STTTGEETTTSSSE--EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-----HHHHHHH
T ss_pred cccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccc
Confidence 99999866322111 22223447789999999998889999999999999999999 7888763311 1111110
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
. .......+..++..+.+++.+||+.||++|||+.++++.|
T Consensus 219 -~--------------------------~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 219 -K--------------------------QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -H--------------------------TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -c--------------------------ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0 0011122335788899999999999999999999999876
No 83
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-36 Score=330.16 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=200.1
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
+|++.+.||+|+||+||+|.+..+++.||+|++.... ......+.+|+.++++++||||+++++++. .++..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec-----CCCeE
Confidence 4788999999999999999998899999999986432 122345778999999999999999999854 44789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l 143 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGN---------PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRI 143 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEE
Confidence 999999999999988864321 2588999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||++........ .....|+..|+|||++.+..++.++||||+||++|||++|+.||...... .....
T Consensus 144 ~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~--~~~~~---- 212 (285)
T cd05605 144 SDLGLAVEIPEGET-----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK--VKREE---- 212 (285)
T ss_pred eeCCCceecCCCCc-----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh--hHHHH----
Confidence 99999976533221 12245899999999999889999999999999999999999998632110 00000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
+...+ .......+...+..+.+++.+||+.||++|| +++++++.
T Consensus 213 ~~~~~-----------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 213 VERRV-----------------------KEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred HHHHh-----------------------hhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 00000 0001111234667789999999999999999 88888654
No 84
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=300.01 Aligned_cols=253 Identities=21% Similarity=0.378 Sum_probs=204.7
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc--------hhHHHHHHHHHHHhc-CCCCceEEEeecccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG--------ASKSFLAECKALKNI-RHRNLVKVITSCSSI 732 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 732 (988)
-+.|+..+.+|.|..++|.++.++.+|..+|+|++...... ..+.-.+|+.+++++ .||+|+.+.++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~---- 91 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV---- 91 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee----
Confidence 35688889999999999999999999999999999633221 124567899999998 89999999999
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
++.+...++|+|.|+.|.|.+|+...- .+++.+..+|++|+.+|++|||.. +|||||+||+|||+
T Consensus 92 -yes~sF~FlVFdl~prGELFDyLts~V-----------tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILl 156 (411)
T KOG0599|consen 92 -YESDAFVFLVFDLMPRGELFDYLTSKV-----------TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILL 156 (411)
T ss_pred -ccCcchhhhhhhhcccchHHHHhhhhe-----------eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheee
Confidence 455688899999999999999997653 789999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCC------CCCCCccchHHHHHHHHHHHhCCCCCCcc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG------SEVSTNGDIYSYGILLLEMVTGKKPTDVM 886 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDvwslG~vl~elltg~~p~~~~ 886 (988)
|++.++||+|||+|+....+..... ..||++|.|||.+.. ..|+..+|+||.||++|.++.|.+||-.-
T Consensus 157 ddn~~i~isDFGFa~~l~~GekLre-----lCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR 231 (411)
T KOG0599|consen 157 DDNMNIKISDFGFACQLEPGEKLRE-----LCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR 231 (411)
T ss_pred ccccceEEeccceeeccCCchhHHH-----hcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH
Confidence 9999999999999998877665544 459999999998653 46888999999999999999999997421
Q ss_pred ccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 887 FEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.+..+...+. ...+.-..++| .++.....+||.+|++.||.+|.|++|+++
T Consensus 232 ----------kQmlMLR~Im---eGkyqF~speW----------------adis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 232 ----------KQMLMLRMIM---EGKYQFRSPEW----------------ADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred ----------HHHHHHHHHH---hcccccCCcch----------------hhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 0000111111 11111112233 256677899999999999999999999986
Q ss_pred H
Q 001974 967 E 967 (988)
Q Consensus 967 ~ 967 (988)
.
T Consensus 283 H 283 (411)
T KOG0599|consen 283 H 283 (411)
T ss_pred C
Confidence 4
No 85
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.2e-36 Score=323.52 Aligned_cols=251 Identities=25% Similarity=0.411 Sum_probs=199.2
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
++|++.+.||+|+||.||+|+++ ++..+|+|.+.... ....++.+|++++++++||||+++++++. .++..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEEE
Confidence 46888999999999999999986 56789999876332 33467889999999999999999999864 3477899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.+||+|
T Consensus 77 v~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d 143 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ----------GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSD 143 (256)
T ss_pred EEEcCCCCcHHHHHHhCc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECC
Confidence 999999999999987543 2578899999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.++........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......
T Consensus 144 ~g~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-----~~~~~~-- 213 (256)
T cd05114 144 FGMTRYVLDDEYT---SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-----YEVVEM-- 213 (256)
T ss_pred CCCccccCCCcee---ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH--
Confidence 9999765332211 1122345678999999988889999999999999999999 8999863210 011100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
+.. ......+...+.++.+++.+||+.+|++||+++|+++.|
T Consensus 214 ---i~~----------------------~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 214 ---ISR----------------------GFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---HHC----------------------CCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 000 000011223456789999999999999999999999886
No 86
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.9e-36 Score=336.15 Aligned_cols=273 Identities=23% Similarity=0.378 Sum_probs=207.5
Q ss_pred hhCCCCCCceeccccceeEEEEEECC-----CCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeeccccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQ-----DGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSID 733 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 733 (988)
+.++|++.+.||+|+||.||+|.... +++.||+|+++... ....+.+..|+.++.++ +|+||++++++|..
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~-- 82 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK-- 82 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec--
Confidence 34679999999999999999997532 35789999986432 22345678899999999 89999999998753
Q ss_pred ccCCCceEEEEeeccccchhhhcCCCCCCC--------------------------------------------------
Q 001974 734 FQGNDFKALVYEFMTNGSLENWLHPDAVPQ-------------------------------------------------- 763 (988)
Q Consensus 734 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------- 763 (988)
.+...+++|||+++++|.+++.......
T Consensus 83 --~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 83 --PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred --CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 3467889999999999999986432100
Q ss_pred chhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccccceecccc
Q 001974 764 KDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGV 843 (988)
Q Consensus 764 ~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~ 843 (988)
........++++..+.+++.||+.||+|||+. +|+||||||+||++++++.+||+|||+++......... .....
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~--~~~~~ 235 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV--RKGDA 235 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh--hccCC
Confidence 00111124789999999999999999999998 99999999999999999999999999998654322111 11123
Q ss_pred ccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhh
Q 001974 844 RGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDA 922 (988)
Q Consensus 844 ~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 922 (988)
.++..|+|||++.+..++.++|||||||++|||++ |..||......+ . .. ..+....
T Consensus 236 ~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~---~~-~~~~~~~----------------- 293 (337)
T cd05054 236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-E---FC-RRLKEGT----------------- 293 (337)
T ss_pred CCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-H---HH-HHHhccC-----------------
Confidence 46778999999999999999999999999999998 999986421110 0 00 0000000
Q ss_pred hhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 923 TNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
....+...++++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 294 ---------~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 294 ---------RMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ---------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 001122456779999999999999999999999999998754
No 87
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.9e-36 Score=335.26 Aligned_cols=245 Identities=23% Similarity=0.355 Sum_probs=193.3
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHH---HhcCCCCceEEEeecccccccCCC
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKAL---KNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
|++.+.||+|+||.||+|++..+++.||||+++... ....+.+..|++++ +.++||||+++++++. .++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~-----~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQ-----TED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEE-----cCC
Confidence 677899999999999999999899999999997432 22335566676655 4568999999999853 457
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+++++|..++... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~------------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~ 140 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD------------VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFV 140 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC------------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcE
Confidence 899999999999999887542 588999999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
||+|||+++....... ......|++.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 141 kL~Dfg~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-----~~~~~ 211 (324)
T cd05589 141 KIADFGLCKEGMGFGD----RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-----EEVFD 211 (324)
T ss_pred EeCcccCCccCCCCCC----cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----HHHHH
Confidence 9999999874322111 12234689999999999999999999999999999999999999863211 01100
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 966 (988)
. + .......+..++..+.+++.+||+.||++|| ++.++++
T Consensus 212 ~-----i-----------------------~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 212 S-----I-----------------------VNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred H-----H-----------------------HhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0 0 0001112234677889999999999999999 4566554
No 88
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-36 Score=334.74 Aligned_cols=200 Identities=26% Similarity=0.402 Sum_probs=173.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.++|++.++||+|+||.||+|++..++..||+|+++... ......+.+|++++++++||||+++++++.. ++..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CCEE
Confidence 468999999999999999999999899999999987542 2334678999999999999999999999653 4789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. .+|+||||||+||++++++.+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL 145 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAG-----------RIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKL 145 (333)
T ss_pred EEEEecCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEE
Confidence 99999999999999986542 578888999999999999999974 27999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
+|||++....... .....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 146 ~Dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 146 CDFGVSGQLIDSM------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred eeCCcchhhhhhc------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9999987543221 1224589999999999998899999999999999999999999864
No 89
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.5e-36 Score=328.44 Aligned_cols=266 Identities=23% Similarity=0.421 Sum_probs=205.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCC-----eEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDG-----TIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
++|++.+.||+|+||.||+|.....+ +.||+|.++.... .....+.+|++++++++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-----~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-----K 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----C
Confidence 46889999999999999999986444 6799999864432 33457889999999999999999999854 3
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCch-----hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCee
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKD-----VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVL 811 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 811 (988)
.+..+++|||+++++|.+++......... .......+++.+++.++.|++.||+|||+. +++||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 47789999999999999999754321100 000113588999999999999999999998 9999999999999
Q ss_pred eCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCC
Q 001974 812 LDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGD 890 (988)
Q Consensus 812 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~ 890 (988)
+++++.+||+|||+++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~- 233 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADYY--RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ- 233 (283)
T ss_pred EcCCCcEEECCCcceeeccccccc--cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 999999999999999754332211 11122346788999999998899999999999999999998 99998632111
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
... ..+. . ......+..++.++.+++.+||+.||++||+++||++.|++
T Consensus 234 ----~~~-----~~i~----~------------------~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 234 ----EVI-----EMIR----S------------------RQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ----HHH-----HHHH----c------------------CCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 000 0000 0 00011234678899999999999999999999999999975
No 90
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.4e-36 Score=326.17 Aligned_cols=258 Identities=30% Similarity=0.504 Sum_probs=209.0
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.+..+|++.+.||+|+||.||+|.+.. ++.||+|++..........+..|+.+++.++|+||+++++++. ..+.
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 76 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEP 76 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCC
Confidence 345678999999999999999999975 8999999997665545678999999999999999999999854 3477
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+|
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~k 144 (261)
T cd05148 77 VYIITELMEKGSLLAFLRSPEG---------QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCK 144 (261)
T ss_pred eEEEEeecccCCHHHHHhcCCC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEE
Confidence 8999999999999999976432 3578999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||.+......... .....++..|+|||...+..++.++||||||+++|+|++ |+.||...... ....
T Consensus 145 l~d~g~~~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~-----~~~~ 215 (261)
T cd05148 145 VADFGLARLIKEDVYL----SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH-----EVYD 215 (261)
T ss_pred EccccchhhcCCcccc----ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHH
Confidence 9999999765432111 112346778999999988899999999999999999998 89998632110 0000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
. +.. . .....+..+++++.+++.+||+.||++|||++++++.|+.+
T Consensus 216 ~-----~~~----~------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 216 Q-----ITA----G------------------YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred H-----HHh----C------------------CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0 000 0 00112236678899999999999999999999999999863
No 91
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.7e-36 Score=357.98 Aligned_cols=274 Identities=24% Similarity=0.309 Sum_probs=207.9
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.++||+|+||.||+|++..+|+.||+|+++... ....+++.+|++++++++||||+++++++.. ++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-----~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-----GDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-----CCE
Confidence 57999999999999999999999899999999986432 2234578999999999999999999998643 478
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||++||+|.+++.................++..++.++.||++||+|||+. +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 89999999999999998642211100011123567888999999999999999998 999999999999999999999
Q ss_pred Eeeecccccccccccc--------------cceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 820 VGDFGLARVRQEVSNL--------------TQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~--------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
|+|||+++........ .........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 9999999865211100 00011224699999999999999999999999999999999999999864
Q ss_pred cccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-CHHHH
Q 001974 886 MFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-SITNV 964 (988)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~ev 964 (988)
..... ... .... .++ .. .....++|+.+.+++.+|++.||++|| +++++
T Consensus 234 ~~~~k-----i~~---~~~i---~~P------~~-------------~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL 283 (932)
T PRK13184 234 KKGRK-----ISY---RDVI---LSP------IE-------------VAPYREIPPFLSQIAMKALAVDPAERYSSVQEL 283 (932)
T ss_pred cchhh-----hhh---hhhc---cCh------hh-------------ccccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 11100 000 0000 000 00 001125677899999999999999995 67778
Q ss_pred HHHHHHHHHH
Q 001974 965 VHELQSVKNA 974 (988)
Q Consensus 965 l~~L~~i~~~ 974 (988)
.+.|+...+.
T Consensus 284 l~~Le~~lq~ 293 (932)
T PRK13184 284 KQDLEPHLQG 293 (932)
T ss_pred HHHHHHHHhc
Confidence 8888877554
No 92
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.5e-36 Score=322.43 Aligned_cols=258 Identities=24% Similarity=0.443 Sum_probs=205.2
Q ss_pred hCCCCCCceeccccceeEEEEEECCC---CeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQD---GTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.++|++.+.||+|+||+||+|++... ...||+|+++.... ....++.+|+.++++++||||+++++++. .+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-----KS 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-----cC
Confidence 46799999999999999999998643 45799999864432 33467889999999999999999999854 44
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~ 144 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLREND----------GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLV 144 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCC
Confidence 77899999999999999987543 2688999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
++|+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..
T Consensus 145 ~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~-----~~ 217 (266)
T cd05033 145 CKVSDFGLSRRLEDSEAT--YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-----DV 217 (266)
T ss_pred EEECccchhhcccccccc--eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH-----HH
Confidence 999999999876421111 11112335678999999998899999999999999999998 99997532110 00
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
...+.. . .....+..++..+.+++.+||+.+|++||+++|+++.|+++
T Consensus 218 -----~~~~~~---~-------------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 218 -----IKAVED---G-------------------YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred -----HHHHHc---C-------------------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000 0 00011235677899999999999999999999999999875
No 93
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-36 Score=343.43 Aligned_cols=256 Identities=22% Similarity=0.288 Sum_probs=197.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.|+.++.||+|+||+||+|++..+++.||+|+++... ....+.+.+|++++++++||||+++++++. +++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCCEE
Confidence 5888999999999999999999999999999996432 233457889999999999999999999854 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++++||
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~-----------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL 142 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME-----------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKL 142 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEE
Confidence 99999999999999986543 578889999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccc-------------------------------------------cceeccccccccccccCcccCC
Q 001974 821 GDFGLARVRQEVSNL-------------------------------------------TQSCSVGVRGTIGYAAPEYGLG 857 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~-------------------------------------------~~~~~~~~~gt~~y~aPE~~~~ 857 (988)
+|||+++........ .........||+.|+|||++.+
T Consensus 143 ~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 222 (381)
T cd05626 143 TDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR 222 (381)
T ss_pred eeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC
Confidence 999997643110000 0000123469999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhcccc
Q 001974 858 SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKI 937 (988)
Q Consensus 858 ~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~ 937 (988)
..++.++|||||||++|||++|+.||...... ..... +...... .......
T Consensus 223 ~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~-----~~~~~-----i~~~~~~-------------------~~~~~~~ 273 (381)
T cd05626 223 KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPT-----ETQLK-----VINWENT-------------------LHIPPQV 273 (381)
T ss_pred CCCCCccceeehhhHHHHHHhCCCCCcCCCHH-----HHHHH-----HHccccc-------------------cCCCCCC
Confidence 89999999999999999999999998632111 00000 0000000 0001112
Q ss_pred chhHHHHHHhhc--ccCcCCCCCCCHHHHHHH
Q 001974 938 ECPISMVRIGVA--CSVESPQDRMSITNVVHE 967 (988)
Q Consensus 938 ~~~~~l~~li~~--cl~~dP~~RPs~~evl~~ 967 (988)
.+++++.+++.+ |+..+|..||+++|+++.
T Consensus 274 ~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 274 KLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 356778899988 556667779999999864
No 94
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.4e-36 Score=328.64 Aligned_cols=275 Identities=24% Similarity=0.386 Sum_probs=206.1
Q ss_pred CCCCCCceeccccceeEEEEEE----CCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAF----DQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~----~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
++|++.+.||+|+||.||+|.. ..+++.||+|.++.......+.+.+|++++++++||||+++++++... +..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC---CCC
Confidence 5788999999999999999984 356889999998766555567889999999999999999999986532 345
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~----------~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~ 147 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR----------ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRV 147 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC----------cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeE
Confidence 6899999999999999986543 2578999999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
||+|||+++.......... ......++..|+|||++.+..++.++|||||||++|||++|..|+..... . +..
T Consensus 148 ~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~---~~~ 220 (284)
T cd05081 148 KIGDFGLTKVLPQDKEYYK-VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---E---FMR 220 (284)
T ss_pred EECCCcccccccCCCccee-ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---h---hhh
Confidence 9999999986543322111 11112244569999999988899999999999999999998777532110 0 000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHH-hhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRL-RQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
. ..... .... ......+.+ ..........++.++.+++.+||+.+|++|||++|+++.|+++
T Consensus 221 ~-~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 221 M-MGNDK--------QGQM--IVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred h-ccccc--------cccc--chHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0 00000 0000 000000000 0011122345778899999999999999999999999999876
No 95
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-36 Score=351.29 Aligned_cols=254 Identities=20% Similarity=0.236 Sum_probs=202.5
Q ss_pred CCCCCceeccccceeEEEEEECCC-CeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQD-GTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
.|.+.+.||+|++|.||+|....+ ++.||+|.+..........+..|+.+++.++||||+++++++. .++..++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEEE
Confidence 488999999999999999998777 7889999876555555567888999999999999999999964 3478999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++|+|.+++...... ..++++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 143 v~E~~~gg~L~~~l~~~~~~-------~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~D 212 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKE-------HLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGD 212 (478)
T ss_pred EEECCCCCCHHHHHHHHHhc-------cCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEe
Confidence 99999999999887542110 13588999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..........
T Consensus 213 Fgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----~~~~~~~~~~ 285 (478)
T PTZ00267 213 FGFSKQYSDSVS--LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS-----QREIMQQVLY 285 (478)
T ss_pred CcCceecCCccc--cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHh
Confidence 999986543221 111223468999999999999999999999999999999999999986321 1111111000
Q ss_pred hhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 903 DHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 903 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
+.. ...+..++.++.+++.+||+.||++||++++++.
T Consensus 286 ------------~~~---------------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 286 ------------GKY---------------DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------------CCC---------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 000 0112245677999999999999999999999875
No 96
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=9.9e-37 Score=337.74 Aligned_cols=243 Identities=24% Similarity=0.299 Sum_probs=194.7
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
+.||+|+||.||+|++..+|+.||+|+++... ......+..|+++++.++||||+++++++ ..++..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 46999999999999999899999999997432 22345678899999999999999999884 44578999999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHH-HCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
|+++|+|.+++.... .+++.++..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg 141 (325)
T cd05594 76 YANGGELFFHLSRER-----------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFG 141 (325)
T ss_pred CCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCC
Confidence 999999998886543 58899999999999999999997 6 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~~~i~--- 209 (325)
T cd05594 142 LCKEGIKDGA----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELIL--- 209 (325)
T ss_pred CCeecCCCCc----ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHHHHHh---
Confidence 9874322111 11224589999999999999999999999999999999999999863210 01100000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
......+...++++.+++.+||+.||++|+ +++++++.
T Consensus 210 -------------------------~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 210 -------------------------MEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred -------------------------cCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 000111234667899999999999999996 89998754
No 97
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.5e-36 Score=334.40 Aligned_cols=242 Identities=22% Similarity=0.306 Sum_probs=192.5
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCC-CCceEEEeecccccccCCCc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRH-RNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 739 (988)
+|++.+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|++++..+.| ++|+++++++ ...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 488899999999999999999989999999999743 22344667889999999966 4577888774 34578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~-----------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~k 141 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG-----------KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIK 141 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEE
Confidence 999999999999999886543 578899999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||++........ ......||+.|+|||++.+..++.++||||+||++|||+||+.||..... .....
T Consensus 142 L~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~- 211 (324)
T cd05587 142 IADFGMCKENIFGGK----TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-----DELFQ- 211 (324)
T ss_pred EeecCcceecCCCCC----ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHH-
Confidence 999999864321111 11234589999999999999999999999999999999999999863211 00000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI 961 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 961 (988)
.+. ......+...+.++.+++.+||+.||++|+++
T Consensus 212 ----~i~-----------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 212 ----SIM-----------------------EHNVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----HHH-----------------------cCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 000 00011123456778999999999999999986
No 98
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9.6e-37 Score=343.94 Aligned_cols=256 Identities=23% Similarity=0.313 Sum_probs=200.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||+||+|++..+++.||||+++... ......+.+|+.+++.++||||+++++++. .++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ-----DENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE-----cCCe
Confidence 47999999999999999999999899999999997432 233456788999999999999999999854 4588
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+|
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~-----------~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~k 141 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD-----------TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIK 141 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEE
Confidence 999999999999999986543 588999999999999999999998 999999999999999999999
Q ss_pred Eeeecccccccccccccc----------------------------------eeccccccccccccCcccCCCCCCCccc
Q 001974 820 VGDFGLARVRQEVSNLTQ----------------------------------SCSVGVRGTIGYAAPEYGLGSEVSTNGD 865 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sD 865 (988)
|+|||++........... ......+||+.|+|||++.+..++.++|
T Consensus 142 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 221 (364)
T cd05599 142 LSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECD 221 (364)
T ss_pred EeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeee
Confidence 999999875432110000 0011245899999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHH
Q 001974 866 IYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVR 945 (988)
Q Consensus 866 vwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 945 (988)
||||||++|||++|..||..... ...... +..+... + ........++++.+
T Consensus 222 iwSlG~il~el~~G~~Pf~~~~~-----~~~~~~-----i~~~~~~-~------------------~~~~~~~~s~~~~~ 272 (364)
T cd05599 222 WWSLGVIMYEMLVGYPPFCSDNP-----QETYRK-----IINWKET-L------------------QFPDEVPLSPEAKD 272 (364)
T ss_pred eecchhHHHHhhcCCCCCCCCCH-----HHHHHH-----HHcCCCc-c------------------CCCCCCCCCHHHHH
Confidence 99999999999999999863211 110000 0000000 0 00011135677899
Q ss_pred HhhcccCcCCCCCCC---HHHHHHH
Q 001974 946 IGVACSVESPQDRMS---ITNVVHE 967 (988)
Q Consensus 946 li~~cl~~dP~~RPs---~~evl~~ 967 (988)
++.+|+. +|.+|++ ++|+++.
T Consensus 273 li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 273 LIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred HHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 9999996 9999998 8888763
No 99
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-36 Score=340.24 Aligned_cols=204 Identities=26% Similarity=0.353 Sum_probs=174.1
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||+||+|+...+++.||+|+++... ......+..|+.++.+++|+||+++++++ .++..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 47899999999999999999999899999999996432 22335678899999999999999999985 44578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+|
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~-----------~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vk 141 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD-----------TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVK 141 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEE
Confidence 999999999999999987543 688999999999999999999998 999999999999999999999
Q ss_pred Eeeeccccccccccccc-------------------------------ceeccccccccccccCcccCCCCCCCccchHH
Q 001974 820 VGDFGLARVRQEVSNLT-------------------------------QSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYS 868 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvws 868 (988)
|+|||+++......... ........||+.|+|||++.+..++.++||||
T Consensus 142 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwS 221 (363)
T cd05628 142 LSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (363)
T ss_pred EeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhh
Confidence 99999987543211000 00012346999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCc
Q 001974 869 YGILLLEMVTGKKPTDV 885 (988)
Q Consensus 869 lG~vl~elltg~~p~~~ 885 (988)
|||++|||++|+.||..
T Consensus 222 lGvil~ell~G~~Pf~~ 238 (363)
T cd05628 222 LGVIMYEMLIGYPPFCS 238 (363)
T ss_pred hHHHHHHHHhCCCCCCC
Confidence 99999999999999863
No 100
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.2e-36 Score=350.53 Aligned_cols=265 Identities=23% Similarity=0.285 Sum_probs=206.6
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeeccccccc-
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ- 735 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~- 735 (988)
....++|++.+.||+|+||+||+|++..+|+.||||++.... ......+.+|+..+..++|+|++++.+.+...+..
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345579999999999999999999998899999999986442 23345688899999999999999988765432111
Q ss_pred --CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC
Q 001974 736 --GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD 813 (988)
Q Consensus 736 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 813 (988)
.....++||||+++|+|.+++....... ..+++..+..++.|++.||.|||+. +|+||||||+||+++
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~-------~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~ 177 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTN-------RTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLC 177 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccC-------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEe
Confidence 1123689999999999999986532211 3688999999999999999999998 999999999999999
Q ss_pred CCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 814 NDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 814 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
.++.+||+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||... ..
T Consensus 178 ~~~~vkL~DFGls~~~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~ 250 (496)
T PTZ00283 178 SNGLVKLGDFGFSKMYAATVSD--DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NM 250 (496)
T ss_pred CCCCEEEEecccCeeccccccc--cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CH
Confidence 9999999999999865432111 1122346899999999999999999999999999999999999998632 11
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.......... . ....+..+++++.+++.+||+.||++||++.++++.
T Consensus 251 ~~~~~~~~~~------------~---------------~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 251 EEVMHKTLAG------------R---------------YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHHhcC------------C---------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111111000 0 001123567789999999999999999999999864
No 101
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2e-36 Score=334.10 Aligned_cols=238 Identities=24% Similarity=0.323 Sum_probs=190.4
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||+||+|+++.+++.||+|+++.. .....+.+..|..++... +||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 4699999999999999989999999998743 223445677888888877 799999999985 4457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 Ey~~~g~L~~~i~~~~-----------~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG 141 (320)
T cd05590 76 EFVNGGDLMFHIQKSR-----------RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFG 141 (320)
T ss_pred cCCCCchHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCC
Confidence 9999999999886543 588999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .........
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~~-- 210 (320)
T cd05590 142 MCKEGIFNGK----TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAILN-- 210 (320)
T ss_pred CCeecCcCCC----cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHhc--
Confidence 9875322111 12234589999999999999999999999999999999999999863211 111110000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT 962 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 962 (988)
.....+...+.++.+++.+|++.||++||++.
T Consensus 211 --------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 211 --------------------------DEVVYPTWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred --------------------------CCCCCCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 00011223567789999999999999999983
No 102
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=314.79 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=207.1
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
|.++.+||+|+||.||+|.++.+|..||+|.+..+ ...+++.+|+.+|+++..|+||++||.+.. ....+|||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-----~sDLWIVM 107 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFK-----HSDLWIVM 107 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhcc-----CCceEeeh
Confidence 66788999999999999999999999999998654 345889999999999999999999998543 37789999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
|||..|+..+.++... +++++.++..+.+..++||+|||.. .-||||||+.|||++.+|.+||+|||
T Consensus 108 EYCGAGSiSDI~R~R~----------K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFG 174 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARR----------KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFG 174 (502)
T ss_pred hhcCCCcHHHHHHHhc----------CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhcc
Confidence 9999999999998765 4899999999999999999999998 88999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
.|..+.+.. .....+.||+.|||||++..-.|..++||||+|++..||..|++||....+...-+
T Consensus 175 VAGQLTDTM----AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF----------- 239 (502)
T KOG0574|consen 175 VAGQLTDTM----AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF----------- 239 (502)
T ss_pred ccchhhhhH----HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE-----------
Confidence 998765432 22335689999999999999999999999999999999999999987543321000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
++ ...+ .+....+.....++.+++++|+.+.|++|.||.++++.
T Consensus 240 ---MI----PT~P------------PPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 240 ---MI----PTKP------------PPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ---ec----cCCC------------CCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 00 0000 01112234556789999999999999999999998753
No 103
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.7e-36 Score=332.45 Aligned_cols=242 Identities=21% Similarity=0.328 Sum_probs=190.2
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..++... +||||+++++++ ..++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999999899999999997432 22334556677777655 899999999884 3457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 e~~~gg~L~~~~~~~~-----------~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 141 (316)
T cd05592 76 EYLNGGDLMFHIQSSG-----------RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFG 141 (316)
T ss_pred cCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCc
Confidence 9999999999886543 588899999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 142 ~a~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~----- 207 (316)
T cd05592 142 MCKENMNGE----GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDS----- 207 (316)
T ss_pred CCeECCCCC----CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHH-----
Confidence 997543221 112234589999999999999999999999999999999999999863211 111100
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH-HHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT-NVVH 966 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 966 (988)
+.. .....+..++.++.+++.+||+.||++||++. ++++
T Consensus 208 i~~-----------------------~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 208 ILN-----------------------DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHc-----------------------CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 000 00111224567789999999999999999875 4543
No 104
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.5e-36 Score=327.09 Aligned_cols=271 Identities=25% Similarity=0.393 Sum_probs=203.9
Q ss_pred CCCCceeccccceeEEEEEE----CCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 665 FSSTHLIGMGSFGSVYKGAF----DQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
|...+.||+|+||+||++.. ..+++.||+|+++.... .....+.+|++++++++||||+++++++... ....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ---GGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CCce
Confidence 38889999999999988653 34678999999875432 3456788999999999999999999986532 3456
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++... .+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+|
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~------------~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~ 147 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKH------------KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVK 147 (283)
T ss_pred EEEEecCCCCCCHHHHHHHc------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEE
Confidence 89999999999999998542 589999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||+++......... .......++..|+|||.+.+..++.++||||||+++|||+||+.||................
T Consensus 148 l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 148 IGDFGLAKAVPEGHEYY-RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred EeecccccccCCcchhh-ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 99999998654322111 11112235677999999988889999999999999999999999976422110000000000
Q ss_pred HH-hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 900 AL-LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 900 ~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
.. .....+..+ .......+..++.++.+++.+||+.+|++|||++++++.|+++.
T Consensus 227 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 227 QMTVVRLIELLE------------------RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ccchhhhhhhhh------------------cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 00 000000000 00111223457789999999999999999999999999999875
No 105
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=5.8e-36 Score=326.08 Aligned_cols=270 Identities=25% Similarity=0.407 Sum_probs=208.9
Q ss_pred CCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
++|.+.+.||+|+||.||++... .++..||+|.++.......+.+.+|++++++++||||+++++++. .+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 56888999999999999999852 345679999987655555678999999999999999999999964 34
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCch--hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKD--VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~--~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
+..++||||+++++|.+++......... .......+++.+++.++.|++.||+|||+. +++||||||+||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccC
Confidence 7889999999999999999754321100 000113589999999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~ 894 (988)
+.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 157 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~----- 229 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN----- 229 (288)
T ss_pred CcEEeccCCccccccCCce--eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----
Confidence 9999999999985533221 111112335778999999998899999999999999999999 89997632111
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
..... +.. .. ....+..++.++.+++.+||+.||.+|||+.|+.+.|+++.++
T Consensus 230 ~~~~~-----i~~---~~-------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 230 EVIEC-----ITQ---GR-------------------VLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHHHH-----HHc---CC-------------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 00000 000 00 0011124567899999999999999999999999999999865
No 106
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=8.9e-37 Score=342.67 Aligned_cols=256 Identities=24% Similarity=0.331 Sum_probs=203.7
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||+||+|++..+++.||+|+++... ......+..|++++..++||||+++++++ .+++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 47999999999999999999999899999999997432 23446788999999999999999999884 45588
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~k 141 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD-----------VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIK 141 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEE
Confidence 999999999999999987542 588999999999999999999998 999999999999999999999
Q ss_pred Eeeeccccccccccc-------------------------ccceeccccccccccccCcccCCCCCCCccchHHHHHHHH
Q 001974 820 VGDFGLARVRQEVSN-------------------------LTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLL 874 (988)
Q Consensus 820 L~DfG~a~~~~~~~~-------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ 874 (988)
|+|||++........ ..........||+.|+|||++.+..++.++|||||||++|
T Consensus 142 L~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 221 (350)
T cd05573 142 LADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILY 221 (350)
T ss_pred eecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhh
Confidence 999999986543320 0001122346899999999999999999999999999999
Q ss_pred HHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcC
Q 001974 875 EMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVES 954 (988)
Q Consensus 875 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 954 (988)
||++|+.||..... ..... .+..+... ........+++++.+++.+|+. |
T Consensus 222 ell~g~~Pf~~~~~-----~~~~~-----~i~~~~~~-------------------~~~p~~~~~~~~~~~li~~ll~-d 271 (350)
T cd05573 222 EMLYGFPPFYSDTL-----QETYN-----KIINWKES-------------------LRFPPDPPVSPEAIDLICRLLC-D 271 (350)
T ss_pred hhccCCCCCCCCCH-----HHHHH-----HHhccCCc-------------------ccCCCCCCCCHHHHHHHHHHcc-C
Confidence 99999999864211 00000 01000000 0001112357789999999997 9
Q ss_pred CCCCCC-HHHHHHH
Q 001974 955 PQDRMS-ITNVVHE 967 (988)
Q Consensus 955 P~~RPs-~~evl~~ 967 (988)
|++||+ ++|+++.
T Consensus 272 p~~R~~s~~~ll~h 285 (350)
T cd05573 272 PEDRLGSFEEIKSH 285 (350)
T ss_pred hhhcCCCHHHHhcC
Confidence 999999 9999874
No 107
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.7e-36 Score=322.93 Aligned_cols=259 Identities=23% Similarity=0.362 Sum_probs=201.9
Q ss_pred CCCCCCceeccccceeEEEEEECCCCe----EEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGT----IVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
++|++.+.||+|+||+||+|.+..+++ .|++|.+..... ....++..|+.++++++||||+++++++. +
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------G 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------C
Confidence 568889999999999999999976666 477777753322 23356778888999999999999999853 2
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++++||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +++||||||+||++++++.
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~ 147 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR----------DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSI 147 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCc
Confidence 45689999999999999997543 3688999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
+||+|||.++........ .......++..|+|||++.+..++.++|||||||++||+++ |+.||...... .
T Consensus 148 ~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~------~ 219 (279)
T cd05111 148 VQIADFGVADLLYPDDKK--YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH------E 219 (279)
T ss_pred EEEcCCccceeccCCCcc--cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------H
Confidence 999999999865332211 11122446788999999998899999999999999999998 99998632110 0
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
. .+.+... .....+..++..+.+++.+||..||++|||+.|+++.|..+.+.
T Consensus 220 ~--------~~~~~~~------------------~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 220 V--------PDLLEKG------------------ERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred H--------HHHHHCC------------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 0 0000000 00011223566788999999999999999999999999887653
No 108
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.3e-36 Score=333.08 Aligned_cols=243 Identities=23% Similarity=0.315 Sum_probs=192.9
Q ss_pred CceeccccceeEEEEEEC---CCCeEEEEEEeeccc----cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 668 THLIGMGSFGSVYKGAFD---QDGTIVAIKVFNLQR----HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++.||+|+||.||+|+.. .+++.||+|+++... ......+..|+.+++.++||||+++++++. .++..
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQ-----TGGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEe-----cCCeE
Confidence 368999999999999873 467899999987432 223356788999999999999999999854 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++.... .+.+..+..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 141 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG-----------IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKL 141 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEE
Confidence 99999999999999986543 577888999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......
T Consensus 142 ~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~-----~~~~~~~- 211 (323)
T cd05584 142 TDFGLCKESIHEGT----VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN-----RKKTIDK- 211 (323)
T ss_pred eeCcCCeecccCCC----cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC-----HHHHHHH-
Confidence 99999874322211 1123458999999999999889999999999999999999999986321 0011100
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVH 966 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 966 (988)
+.. .....+..+++++.+++.+||+.||++|| +++++++
T Consensus 212 -------~~~--------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 212 -------ILK--------------------GKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -------HHc--------------------CCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 000 01112234567889999999999999999 7888766
No 109
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.5e-36 Score=336.00 Aligned_cols=253 Identities=20% Similarity=0.261 Sum_probs=196.5
Q ss_pred CCCCCceeccccceeEEEEEEC---CCCeEEEEEEeecc----ccchhHHHHHHHHHHHhc-CCCCceEEEeeccccccc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFD---QDGTIVAIKVFNLQ----RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~---~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 735 (988)
+|++.+.||+|+||.||+|+.. .+++.||+|+++.. .....+.+..|+.+++.+ +||+|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 4888999999999999998873 46889999998642 222345678899999999 599999999884 4
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.++..++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+|||++.+
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~ 141 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRD-----------NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSE 141 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCC
Confidence 4578999999999999999986543 588999999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
+.+||+|||+++........ ......||..|+|||++.+. .++.++|||||||++|||+||+.||....... ...
T Consensus 142 ~~~kl~DfG~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~ 217 (332)
T cd05614 142 GHVVLTDFGLSKEFLSEEKE---RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQS 217 (332)
T ss_pred CCEEEeeCcCCccccccCCC---ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHH
Confidence 99999999999754332211 11234689999999998865 47889999999999999999999986322111 000
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
... . .+ .......+...+..+.+++.+||+.||++|| +++++++.
T Consensus 218 ~~~-~----~~-----------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 218 EVS-R----RI-----------------------LKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HHH-H----HH-----------------------hcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 000 0 00 0001112234667789999999999999999 67777653
No 110
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.6e-36 Score=326.67 Aligned_cols=266 Identities=27% Similarity=0.472 Sum_probs=205.9
Q ss_pred hCCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
.++|.+.+.||+|+||.||+|.+. .+++.||+|.++..... ..+.+.+|++++++++|+||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---- 79 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE---- 79 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec----
Confidence 356888999999999999999874 23578999998754433 45789999999999999999999999643
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchh---hhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDV---EIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
+...++||||+++++|.+++.......... ......+++.++..++.|++.|++|||+. +++||||||+||++
T Consensus 80 -~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 80 -GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred -CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 478999999999999999997653211110 11124688999999999999999999998 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDL 891 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~ 891 (988)
+.++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-- 231 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-- 231 (280)
T ss_pred cCCCeEEECCcccceecccCcce--ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--
Confidence 99999999999999754332211 11112345788999999999999999999999999999999 99997532111
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
..... +. .. .....+..++..+.+++.+||+.||++||++.||++.|+
T Consensus 232 ---~~~~~-----~~---~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 232 ---EVIEC-----IT---QG-------------------RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred ---HHHHH-----HH---cC-------------------CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 00000 00 00 000112246778999999999999999999999999886
No 111
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.9e-36 Score=323.65 Aligned_cols=256 Identities=26% Similarity=0.464 Sum_probs=203.9
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
..++|++.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++. .++..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVT-----KEEPI 76 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEc-----CCCCc
Confidence 3467899999999999999999975 67789999876433 23578899999999999999999998854 44778
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l 144 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEG---------GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKI 144 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEE
Confidence 999999999999999865432 3578889999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||.++....... .......++..|+|||++....++.++|||||||++|+|+| |+.||...... . ...
T Consensus 145 ~dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~-~~~ 215 (261)
T cd05072 145 ADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS-----D-VMS 215 (261)
T ss_pred CCCccceecCCCce---eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH-----H-HHH
Confidence 99999986543221 11122345778999999988889999999999999999998 99998632110 0 000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
.+.... .......++.++.+++.+||+.+|++||+++++.+.|++
T Consensus 216 ----~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 216 ----ALQRGY----------------------RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----HHHcCC----------------------CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000000 001122467789999999999999999999999999875
No 112
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.4e-36 Score=334.07 Aligned_cols=243 Identities=24% Similarity=0.312 Sum_probs=193.2
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|.+++..+ +||||+++++++. .++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~-----~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQ-----TKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCeEEEEE
Confidence 46899999999999999889999999987432 23345677888888876 8999999999854 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|..++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 E~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg 141 (321)
T cd05591 76 EYVNGGDLMFQIQRSR-----------KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFG 141 (321)
T ss_pred eCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecc
Confidence 9999999998886543 578899999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
++........ ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----~~~~~~i~~-- 210 (321)
T cd05591 142 MCKEGILNGV----TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----DDLFESILH-- 210 (321)
T ss_pred cceecccCCc----cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----HHHHHHHHc--
Confidence 9875322211 11234589999999999999999999999999999999999999863211 011100000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-------CHHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-------SITNVVHE 967 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~~ 967 (988)
.....+..++.++.+++.+||+.||++|| +++++++.
T Consensus 211 --------------------------~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 211 --------------------------DDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred --------------------------CCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 00011223567789999999999999999 77777644
No 113
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-36 Score=311.78 Aligned_cols=256 Identities=23% Similarity=0.308 Sum_probs=205.3
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
+.|+.++.||+|.-|+||+++...++..+|+|++..... ....+...|-+||+.++||.++.+|+. |+.++.
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDKY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eeccce
Confidence 456778999999999999999998889999999975432 334567789999999999999999998 566799
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.|+|||||+||+|....+++.. +.+++..++.++.+++.||+|||-. |||.|||||+||||.++|++.
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~---------~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIM 219 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPG---------KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIM 219 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCC---------CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEE
Confidence 9999999999999999887664 4799999999999999999999999 999999999999999999999
Q ss_pred Eeeecccccccccc---------------------------------c-------------------ccceecccccccc
Q 001974 820 VGDFGLARVRQEVS---------------------------------N-------------------LTQSCSVGVRGTI 847 (988)
Q Consensus 820 L~DfG~a~~~~~~~---------------------------------~-------------------~~~~~~~~~~gt~ 847 (988)
|+||.++....... . .....+..++||-
T Consensus 220 LsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGTh 299 (459)
T KOG0610|consen 220 LSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTH 299 (459)
T ss_pred eeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccc
Confidence 99999886432100 0 0001123467999
Q ss_pred ccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHH
Q 001974 848 GYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQR 927 (988)
Q Consensus 848 ~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 927 (988)
.|.|||++.+...+.++|.|+|||++|||+.|..||......+ -....+.+.
T Consensus 300 EYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-----Tl~NIv~~~----------------------- 351 (459)
T KOG0610|consen 300 EYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-----TLRNIVGQP----------------------- 351 (459)
T ss_pred ccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-----hHHHHhcCC-----------------------
Confidence 9999999999999999999999999999999999987432211 111111111
Q ss_pred HhhhhhccccchhHHHHHHhhcccCcCCCCCCC----HHHHHH
Q 001974 928 LRQAKINGKIECPISMVRIGVACSVESPQDRMS----ITNVVH 966 (988)
Q Consensus 928 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 966 (988)
.........+..+.+||++.|.+||++|.. |+||.+
T Consensus 352 ---l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 352 ---LKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred ---CcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 011112255677999999999999999988 777754
No 114
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.2e-36 Score=327.55 Aligned_cols=279 Identities=24% Similarity=0.277 Sum_probs=199.8
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhc---CCCCceEEEeecccccccCCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNI---RHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~ 738 (988)
+|++.+.||+|+||+||+|++..+++.||+|.++... ......+.+|+.+++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5889999999999999999999999999999986432 22234566777777665 799999999987654334456
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||++ ++|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~---------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~ 147 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP---------PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQV 147 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 7899999996 689888865432 2588999999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
||+|||+++....... .....|+..|+|||++.+..++.++||||+||++|||++|++||...... ..+.....
T Consensus 148 kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~ 221 (288)
T cd07863 148 KLADFGLARIYSCQMA-----LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFD 221 (288)
T ss_pred EECccCccccccCccc-----CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHH
Confidence 9999999986543221 12245789999999999989999999999999999999999998532111 00100000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
....................+.. ............++.++.+++.+|++.||++|||+.|++.
T Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 222 -LIGLPPEDDWPRDVTLPRGAFSP----RGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred -HhCCCChhhCcccccccccccCC----CCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000000000000000000 0000001112356677899999999999999999999875
No 115
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=4.1e-36 Score=325.53 Aligned_cols=249 Identities=23% Similarity=0.311 Sum_probs=193.9
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
||+|+||+||++++..+++.||+|.+..... ...+.+..|++++++++|+||+++.+++. .+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ-----TKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-----CCCeEEEEEeCC
Confidence 6999999999999998999999999864322 22356778999999999999999998853 447799999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++|+|.+++....... ..+++..++.++.||+.||+|||+. +|+||||||+||++++++.+||+|||.+.
T Consensus 76 ~~g~L~~~~~~~~~~~-------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 145 (280)
T cd05608 76 NGGDLRYHIYNVDEEN-------PGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAV 145 (280)
T ss_pred CCCCHHHHHHhccccC-------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccce
Confidence 9999998875322111 3689999999999999999999998 99999999999999999999999999997
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVID 907 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (988)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... ....+
T Consensus 146 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~-----~~~~~-- 213 (280)
T cd05608 146 ELKDGQS----KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKE-----LKQRI-- 213 (280)
T ss_pred ecCCCCc----cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHH-----HHHhh--
Confidence 6543221 1223468999999999999999999999999999999999999986321110 0000 00000
Q ss_pred hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 908 IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 908 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
. ......+..++..+.+++.+||+.||++|| +++++++.
T Consensus 214 -~--------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 214 -L--------------------NDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred -c--------------------ccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 0 000112235677899999999999999999 66777653
No 116
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=5.2e-36 Score=337.90 Aligned_cols=272 Identities=25% Similarity=0.364 Sum_probs=206.9
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCC-----CeEEEEEEeecccc-chhHHHHHHHHHHHhcC-CCCceEEEeecccc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQD-----GTIVAIKVFNLQRH-GASKSFLAECKALKNIR-HRNLVKVITSCSSI 732 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 732 (988)
...++|++.+.||+|+||.||+|++... +..||||+++.... ...+.+.+|+++++++. ||||++++++|..
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~- 112 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTK- 112 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc-
Confidence 3457899999999999999999987432 34799999964332 33467899999999995 9999999999643
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCCch-----------------------------------------------
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQKD----------------------------------------------- 765 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~----------------------------------------------- 765 (988)
.+..++||||+++|+|.+++.........
T Consensus 113 ----~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 113 ----SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred ----CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 47899999999999999988653210000
Q ss_pred --------------------------------------hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCC
Q 001974 766 --------------------------------------VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKP 807 (988)
Q Consensus 766 --------------------------------------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 807 (988)
.......+++.++..++.||+.||+|||+. +|+||||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp 265 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAA 265 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCh
Confidence 000013588899999999999999999998 999999999
Q ss_pred CCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCcc
Q 001974 808 GNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVM 886 (988)
Q Consensus 808 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~ 886 (988)
+||++++++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 266 ~Nill~~~~~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 266 RNVLLAQGKIVKICDFGLARDIMHDSNY--VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred HhEEEeCCCEEEEEeCCcceeccccccc--cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 9999999999999999999865432211 11122346788999999999899999999999999999997 99998643
Q ss_pred ccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 887 FEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
...+. ....+... .....+..++.++.+++.+||+.||++||++.++.+
T Consensus 344 ~~~~~---------~~~~~~~~----------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 344 IVDST---------FYNKIKSG----------------------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred chhHH---------HHHHHhcC----------------------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 11100 00000000 001112356788999999999999999999999999
Q ss_pred HHHHHH
Q 001974 967 ELQSVK 972 (988)
Q Consensus 967 ~L~~i~ 972 (988)
.|+++.
T Consensus 393 ~l~~l~ 398 (400)
T cd05105 393 IVESLL 398 (400)
T ss_pred HHHHHc
Confidence 998864
No 117
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.7e-36 Score=323.29 Aligned_cols=262 Identities=23% Similarity=0.305 Sum_probs=206.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|+...+++.||+|.++... ......+.+|+++++.++||||+++++++.. .+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-----DNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-----CCe
Confidence 57899999999999999999998899999999876322 2334568899999999999999999998543 478
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++|+||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~ 146 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ-------KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc-------cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEE
Confidence 89999999999999888532211 12578889999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||.+........ ......++..|+|||.+.+..++.++||||||+++|||++|+.||..... ....+...
T Consensus 147 l~d~g~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---~~~~~~~~ 219 (267)
T cd08228 147 LGDLGLGRFFSSKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLFSLCQK 219 (267)
T ss_pred ECccccceeccchhH----HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc---cHHHHHHH
Confidence 999999886543221 11123588899999999888899999999999999999999999753211 11111110
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
+.....+. ......+..+.+++.+||+.+|++||+++++++.++.++
T Consensus 220 -----~~~~~~~~---------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 220 -----IEQCDYPP---------------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -----HhcCCCCC---------------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 00000000 001135567899999999999999999999999998864
No 118
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.3e-36 Score=333.58 Aligned_cols=243 Identities=22% Similarity=0.334 Sum_probs=191.5
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|++..+++.||+|+++.. .....+.+..|+.++.++ +||||+++++++. .++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-----eCCEEEEEE
Confidence 4799999999999999989999999999743 223345677888888877 8999999999854 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 E~~~~~~L~~~~~~~~-----------~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG 141 (329)
T cd05618 76 EYVNGGDLMFHMQRQR-----------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 141 (329)
T ss_pred eCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCC
Confidence 9999999998886542 688999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCc---chHHHHHHHH
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDL---NLHNYARTAL 901 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~---~~~~~~~~~~ 901 (988)
+++....... ......||..|+|||++.+..++.++|||||||++|||++|+.||......+. ....+....+
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i 217 (329)
T cd05618 142 MCKEGLRPGD----TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 217 (329)
T ss_pred ccccccCCCC----ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH
Confidence 9875322111 11234689999999999999999999999999999999999999964221110 1111111100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI 961 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 961 (988)
.......+...+.++.+++.+||+.||++||++
T Consensus 218 ---------------------------~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 218 ---------------------------LEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ---------------------------hcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 011111233456778999999999999999984
No 119
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.9e-36 Score=333.13 Aligned_cols=248 Identities=22% Similarity=0.329 Sum_probs=194.8
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..++.++ +||||+++++++. .++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~-----~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQ-----TESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEE-----cCCEEEEEE
Confidence 46899999999999999899999999997432 22345678899999998 7999999999854 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|.+++.... ++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 e~~~~g~L~~~~~~~~-----------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg 141 (329)
T cd05588 76 EFVSGGDLMFHMQRQR-----------KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYG 141 (329)
T ss_pred eCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCc
Confidence 9999999998886442 689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCC---cchHHHHHHHH
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGD---LNLHNYARTAL 901 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~---~~~~~~~~~~~ 901 (988)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||+.....+ .....+....+
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~ 217 (329)
T cd05588 142 MCKEGIRPGD----TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI 217 (329)
T ss_pred cccccccCCC----ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHH
Confidence 9874221111 1123468999999999999999999999999999999999999997422111 01111111100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC------HHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS------ITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~ 966 (988)
.......+..++.++.+++.+||+.||++||+ ++|+++
T Consensus 218 ---------------------------~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 218 ---------------------------LEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ---------------------------HcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 01111123346677899999999999999998 566653
No 120
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9e-36 Score=326.02 Aligned_cols=272 Identities=24% Similarity=0.375 Sum_probs=207.7
Q ss_pred CCCCCCceeccccceeEEEEEECCCCe--EEEEEEeecc-ccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGT--IVAIKVFNLQ-RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 738 (988)
++|++.+.||+|+||.||+|....++. .+++|.++.. .....+.+.+|+.++.++ +||||+++++++.. .+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-----~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN-----RG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc-----CC
Confidence 578999999999999999999876664 4788887632 233446789999999999 79999999998543 46
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCch-----hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKD-----VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD 813 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 813 (988)
..++||||+++++|.+++......... .......+++..++.++.|++.|++|||+. +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 789999999999999999754321100 000113588999999999999999999998 999999999999999
Q ss_pred CCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcc
Q 001974 814 NDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLN 892 (988)
Q Consensus 814 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~ 892 (988)
+++.+||+|||++........ ......+..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---- 224 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYVK-----KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---- 224 (297)
T ss_pred CCCeEEECCcCCCccccceec-----cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH----
Confidence 999999999999864322111 111123567999999988889999999999999999998 9999863211
Q ss_pred hHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
...... +. . ......+..++.++.+++.+||+.+|.+||+++++++.|+++.
T Consensus 225 -~~~~~~-----~~----~------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 225 -AELYEK-----LP----Q------------------GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred -HHHHHH-----Hh----c------------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111100 00 0 0000112346778999999999999999999999999999998
Q ss_pred HHhhhhc
Q 001974 973 NALLEAW 979 (988)
Q Consensus 973 ~~~~~~~ 979 (988)
++....+
T Consensus 277 ~~~~~~~ 283 (297)
T cd05089 277 EARKAYV 283 (297)
T ss_pred Hhhcccc
Confidence 8765533
No 121
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-37 Score=331.55 Aligned_cols=254 Identities=24% Similarity=0.382 Sum_probs=207.8
Q ss_pred CCCCceeccccceeEEEEEECCCC---eEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDG---TIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
....++||+|.||.|++|.|+..+ -.||||.++..... ...+|.+|+.+|.+++|+|++++||+..+ ...
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------qp~ 185 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------QPA 185 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------chh
Confidence 345578999999999999996433 25999999866554 56899999999999999999999999643 567
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
.+|||.++.|+|.+.++.... ..+-......++.|||.||.||.++ ++||||+.++|+++-....+||
T Consensus 186 mMV~ELaplGSLldrLrka~~---------~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI 253 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRKAKK---------AILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKI 253 (1039)
T ss_pred hHHhhhcccchHHHHHhhccc---------cceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeee
Confidence 899999999999999987322 3677888999999999999999999 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||+.+-+........ ......-...|+|||.+....++.++|||+|||++|||+| |..||......
T Consensus 254 ~DFGLmRaLg~ned~Yv-m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~---------- 322 (1039)
T KOG0199|consen 254 CDFGLMRALGENEDMYV-MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI---------- 322 (1039)
T ss_pred ecccceeccCCCCcceE-ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH----------
Confidence 99999998776554332 2222345789999999999999999999999999999999 99998642111
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
++.+.+| ....+..+..|++.++++++.||...|++|||+.+|.+.+-
T Consensus 323 ----qIL~~iD------------------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 323 ----QILKNID------------------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred ----HHHHhcc------------------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 1122222 12234456689999999999999999999999999985543
No 122
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.1e-36 Score=329.99 Aligned_cols=242 Identities=23% Similarity=0.334 Sum_probs=190.9
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||+||+|++..+++.||+|+++... ....+.+..|..++... +||||+++++++. .++..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEEEE
Confidence 46999999999999999899999999997532 23345567788888765 9999999999854 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ey~~~g~L~~~l~~~~-----------~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05619 76 EYLNGGDLMFHIQSCH-----------KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFG 141 (316)
T ss_pred eCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCC
Confidence 9999999999986542 578889999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......||..|+|||++.+..++.++||||+||++|||++|+.||.... .......
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~----- 207 (316)
T cd05619 142 MCKENMLGDA----KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----EEELFQS----- 207 (316)
T ss_pred cceECCCCCC----ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----HHHHHHH-----
Confidence 9874322111 1123458999999999999999999999999999999999999986321 1111000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH-HHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT-NVVH 966 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 966 (988)
+. ......+...+.++.+++.+||+.||++||++. ++.+
T Consensus 208 i~-----------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 208 IR-----------------------MDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HH-----------------------hCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 00 000011123556789999999999999999997 5543
No 123
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=3.8e-36 Score=332.73 Aligned_cols=242 Identities=21% Similarity=0.293 Sum_probs=192.8
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 739 (988)
+|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+..|..++..+ +|++|+++++++. ..+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~-----~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQ-----TMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEe-----cCCE
Confidence 4888999999999999999999899999999987432 22334567788888877 6899999988853 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++.++..++.||+.||+|||+. +|+||||||+||++++++.+|
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~-----------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~k 141 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG-----------RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEE
Confidence 999999999999999886543 578899999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .....
T Consensus 142 L~DfG~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-----~~~~~- 211 (323)
T cd05616 142 IADFGMCKENMWDGV----TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQ- 211 (323)
T ss_pred EccCCCceecCCCCC----ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-----HHHHH-
Confidence 999999975322111 11234589999999999999999999999999999999999999863211 00100
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI 961 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 961 (988)
.+. ......+...+.++.+++.+|++.||++|+++
T Consensus 212 ----~i~-----------------------~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 212 ----SIM-----------------------EHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ----HHH-----------------------hCCCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 000 00111223466778999999999999999985
No 124
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=9.6e-36 Score=319.57 Aligned_cols=256 Identities=32% Similarity=0.500 Sum_probs=203.8
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
..++|++.+.||+|++|.||+|.+. +++.||+|.++... ...+.+.+|+.++++++||||+++++++. ..+..
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEPI 76 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCCe
Confidence 3467899999999999999999975 56789999986443 23567899999999999999999999854 34778
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l 144 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAG---------RALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKV 144 (261)
T ss_pred eeeeecccCCcHHHHHhccCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEE
Confidence 999999999999999965431 3588999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||+++....... ....+...+..|+|||+..+..++.++||||||+++|||++ |+.||...... ...
T Consensus 145 ~dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~-- 214 (261)
T cd05068 145 ADFGLARVIKEDIY---EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA-----EVL-- 214 (261)
T ss_pred CCcceEEEccCCcc---cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHH--
Confidence 99999986643211 11112223468999999999899999999999999999999 99998632100 000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
..+. .. .....+..++..+.+++.+|++.+|++||++.++++.|++
T Consensus 215 ---~~~~----~~------------------~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 215 ---QQVD----QG------------------YRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ---HHHH----cC------------------CCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0000 00 0001123466789999999999999999999999999985
No 125
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=317.26 Aligned_cols=248 Identities=25% Similarity=0.364 Sum_probs=208.2
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.-|...+.||+|.|+.|-+|++.-+|+.||||++..... .....+.+|++.|+-++|||||++|++ +......
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQTKl 92 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQTKL 92 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccceE
Confidence 457888999999999999999999999999999975433 334578899999999999999999999 4455889
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC-CCCcEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD-NDMIAH 819 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~k 819 (988)
|+|+|.-.+|+|.+|+-+.. ..+.+.-+.+++.||+.|+.|+|.. .+|||||||+||.+- .-|-+|
T Consensus 93 yLiLELGD~GDl~DyImKHe----------~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVK 159 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHE----------EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVK 159 (864)
T ss_pred EEEEEecCCchHHHHHHhhh----------ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceE
Confidence 99999999999999997765 4789999999999999999999998 999999999998875 568999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCC-CccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVS-TNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|.|||++-.+.+.....+.| |+..|.|||++.+..|+ +++||||+||+||-+++|++||+...+.+
T Consensus 160 LTDFGFSNkf~PG~kL~TsC-----GSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-------- 226 (864)
T KOG4717|consen 160 LTDFGFSNKFQPGKKLTTSC-----GSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-------- 226 (864)
T ss_pred eeeccccccCCCcchhhccc-----chhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh--------
Confidence 99999998887766665544 99999999999999886 67899999999999999999998543321
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.+.-+.|..+ ..+.....++.+||..|+..||++|.+.+||+.
T Consensus 227 -----TLTmImDCKY--------------------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 227 -----TLTMIMDCKY--------------------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -----hhhhhhcccc--------------------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 1112222221 123346678999999999999999999999875
No 126
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-36 Score=333.64 Aligned_cols=256 Identities=24% Similarity=0.411 Sum_probs=212.0
Q ss_pred CCCceeccccceeEEEEEECCCCe----EEEEEEeec-cccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 666 SSTHLIGMGSFGSVYKGAFDQDGT----IVAIKVFNL-QRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 666 ~~~~~lg~G~~g~Vy~a~~~~~~~----~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
...++||+|+||+||+|.|-..|+ +||+|++.. .......++..|+.+|.+++|||+++++|+|... ..
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------~~ 772 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------TL 772 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------hH
Confidence 346899999999999999966665 689998863 3344568899999999999999999999998753 37
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
.||++|++.|+|.+|++..+ ..+.....+.|..|||+||.|||++ ++|||||.++||||.+...+||
T Consensus 773 qlvtq~mP~G~LlDyvr~hr----------~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvki 839 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHR----------DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKI 839 (1177)
T ss_pred HHHHHhcccchHHHHHHHhh----------ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEE
Confidence 89999999999999998866 3788889999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (988)
.|||+|+......... ...+..-.+.|||=|.+....|+.++|||||||++||++| |..||+....+
T Consensus 840 tdfgla~ll~~d~~ey--~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~---------- 907 (1177)
T KOG1025|consen 840 TDFGLAKLLAPDEKEY--SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE---------- 907 (1177)
T ss_pred EecchhhccCcccccc--cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH----------
Confidence 9999999876544322 2223345788999999999999999999999999999999 99998754221
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
++.+.+.. ..+++.++.|+.++..++.+||..|++.||+++++..++.++...
T Consensus 908 ----eI~dlle~------------------geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 908 ----EIPDLLEK------------------GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred ----HhhHHHhc------------------cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 11111110 112345668999999999999999999999999999999987654
No 127
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.5e-36 Score=330.67 Aligned_cols=241 Identities=22% Similarity=0.313 Sum_probs=190.8
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|+++.+|+.||+|+++... ....+....|..++... +||||+++++++ ..++..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 47999999999999999999999999997432 23345667788888765 899999999985 3457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|.+++.... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 E~~~~g~L~~~i~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05620 76 EFLNGGDLMFHIQDKG-----------RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFG 141 (316)
T ss_pred CCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccC
Confidence 9999999999886542 578899999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..... +.
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-----~~~~~-----~~ 207 (316)
T cd05620 142 MCKENVFGDN----RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-----EDELF-----ES 207 (316)
T ss_pred CCeecccCCC----ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHH-----HH
Confidence 9874322111 1223468999999999999999999999999999999999999986321 00100 00
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH-HHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT-NVV 965 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 965 (988)
+. ......+..++.++.+++.+||+.||++||++. +++
T Consensus 208 ~~-----------------------~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 208 IR-----------------------VDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HH-----------------------hCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 00 000111223566789999999999999999985 554
No 128
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.5e-36 Score=322.92 Aligned_cols=247 Identities=23% Similarity=0.302 Sum_probs=192.5
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
||+|+||.||+++.+.+|+.||+|.+.... ......+..|++++++++||||+++++++ ..+...++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999999899999999986322 12234566799999999999999999884 3457899999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||++++++.++|+|||++.
T Consensus 76 ~g~~L~~~~~~~~~---------~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~ 143 (277)
T cd05607 76 NGGDLKYHIYNVGE---------RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAV 143 (277)
T ss_pred CCCCHHHHHHhccc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeee
Confidence 99999988854331 3578899999999999999999998 99999999999999999999999999987
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVID 907 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (988)
....... .....|+..|+|||++.+..++.++||||+||++|||++|+.||...... .........
T Consensus 144 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~-------- 209 (277)
T cd05607 144 ELKDGKT-----ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRR-------- 209 (277)
T ss_pred ecCCCce-----eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHH--------
Confidence 6543221 12245899999999999988999999999999999999999998632111 000000000
Q ss_pred hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 908 IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 908 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
...... ......++.++.+++.+||+.||++||+++|+++.
T Consensus 210 ~~~~~~-------------------~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 210 TLEDEV-------------------KFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred hhcccc-------------------ccccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 000000 00011356778999999999999999999876643
No 129
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.4e-36 Score=335.70 Aligned_cols=203 Identities=26% Similarity=0.302 Sum_probs=169.7
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeeccccc-ccCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSID-FQGN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 737 (988)
..++|++.+.||+|+||.||+|.+..+|+.||+|++... .......+.+|+.+++.++||||+++++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999999889999999998633 2334467889999999999999999999865331 1222
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||++ +++.+.+. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~-------------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~ 161 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIH-------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 161 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHh-------------ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCC
Confidence 45799999995 56666553 2467888999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
+||+|||+++....... .....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 162 ~kl~Dfg~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~ 224 (359)
T cd07876 162 LKILDFGLARTACTNFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 224 (359)
T ss_pred EEEecCCCccccccCcc-----CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 99999999975432211 1224589999999999999999999999999999999999999874
No 130
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.5e-36 Score=341.72 Aligned_cols=256 Identities=21% Similarity=0.265 Sum_probs=197.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||+||+|+...+++.||+|++.... ....+.+.+|++++++++||||+++++++. +++.
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~-----~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQ-----DAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----cCCe
Confidence 47899999999999999999999999999999986432 223456888999999999999999999854 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~-----------~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~k 141 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD-----------TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIK 141 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEE
Confidence 999999999999999986543 578889999999999999999998 999999999999999999999
Q ss_pred Eeeecccccccccccc------------c-------------------------------ceeccccccccccccCcccC
Q 001974 820 VGDFGLARVRQEVSNL------------T-------------------------------QSCSVGVRGTIGYAAPEYGL 856 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~------------~-------------------------------~~~~~~~~gt~~y~aPE~~~ 856 (988)
|+|||+++........ . ........||+.|+|||++.
T Consensus 142 l~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 221 (377)
T cd05629 142 LSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL 221 (377)
T ss_pred EeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc
Confidence 9999999633211000 0 00001246999999999999
Q ss_pred CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccc
Q 001974 857 GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGK 936 (988)
Q Consensus 857 ~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 936 (988)
+..++.++|||||||++|||++|+.||..... . .... .+..+.... .....
T Consensus 222 ~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~----~-~~~~-----~i~~~~~~~-------------------~~p~~ 272 (377)
T cd05629 222 QQGYGQECDWWSLGAIMFECLIGWPPFCSENS----H-ETYR-----KIINWRETL-------------------YFPDD 272 (377)
T ss_pred cCCCCCceeeEecchhhhhhhcCCCCCCCCCH----H-HHHH-----HHHccCCcc-------------------CCCCC
Confidence 99999999999999999999999999863211 0 0000 000000000 00011
Q ss_pred cchhHHHHHHhhcccCcCCCCC---CCHHHHHHH
Q 001974 937 IECPISMVRIGVACSVESPQDR---MSITNVVHE 967 (988)
Q Consensus 937 ~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 967 (988)
..++.++.+++.+|+. +|.+| +++.|+++.
T Consensus 273 ~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 273 IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 1355678999999997 77765 599998875
No 131
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.1e-36 Score=338.60 Aligned_cols=253 Identities=21% Similarity=0.245 Sum_probs=200.4
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.+|+.+++.++|+||+++++++. +++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~-----~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQ-----DKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCe
Confidence 46899999999999999999999999999999997432 234456889999999999999999998853 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~----------~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~k 142 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE----------DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIK 142 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEE
Confidence 999999999999999997653 2688999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccC------CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL------GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
|+|||++......... ......||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 143 L~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~----- 214 (330)
T cd05601 143 LADFGSAARLTANKMV---NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS----- 214 (330)
T ss_pred eccCCCCeECCCCCce---eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----
Confidence 9999999865433221 112245899999999986 45678999999999999999999999863211
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..... .+..... . .........+.++.+++.+|++ +|++|||++++++
T Consensus 215 ~~~~~-----~i~~~~~-~------------------~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 215 AKTYN-----NIMNFQR-F------------------LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred HHHHH-----HHHcCCC-c------------------cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 01110 0000000 0 0001112456778999999998 9999999999885
No 132
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.5e-36 Score=331.21 Aligned_cols=242 Identities=20% Similarity=0.293 Sum_probs=193.7
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||+||+|.+..+++.||+|+++... ......+..|.++++.+ +||||+++++++. ..+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~-----~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQ-----TKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEE-----cCCEEEEEE
Confidence 46999999999999999899999999997432 23345677888898888 7999999999854 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|..++.... .+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 76 e~~~~~~L~~~~~~~~-----------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 141 (318)
T cd05570 76 EYVNGGDLMFHIQRSG-----------RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFG 141 (318)
T ss_pred cCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccC
Confidence 9999999998886543 589999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......|+..|+|||++.+..++.++|||||||++|||++|+.||.... .......
T Consensus 142 ~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~----- 207 (318)
T cd05570 142 MCKEGILGGV----TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQS----- 207 (318)
T ss_pred CCeecCcCCC----cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHH-----
Confidence 9874322111 1122458999999999999999999999999999999999999986321 0111000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH-----HHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI-----TNVVH 966 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 966 (988)
+. ......+..++.++.+++.+||+.||++||++ .++++
T Consensus 208 i~-----------------------~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 208 IL-----------------------EDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HH-----------------------cCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 00 00011123466788999999999999999999 77765
No 133
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.2e-36 Score=340.03 Aligned_cols=255 Identities=21% Similarity=0.273 Sum_probs=200.0
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
..++|++.+.||+|+||.||+|++..+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ .++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 4567999999999999999999999899999999986422 22335578899999999999999999884 445
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..++||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~------------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ 180 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY------------DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 180 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCC
Confidence 7899999999999999998542 467888899999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCC----CCCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS----EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
+||+|||++......... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.... .
T Consensus 181 ~kL~DfG~~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~ 252 (370)
T cd05596 181 LKLADFGTCMKMDANGMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----L 252 (370)
T ss_pred EEEEeccceeeccCCCcc---cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC-----H
Confidence 999999999765432211 11234689999999998653 47889999999999999999999986321 1
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCC--CCCHHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQD--RMSITNVVHE 967 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 967 (988)
.... ..+ .+.... ........++.++.+++.+|++.+|++ |||++|+++.
T Consensus 253 ~~~~-----~~i---~~~~~~----------------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 253 VGTY-----SKI---MDHKNS----------------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HHHH-----HHH---HcCCCc----------------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 1100 000 000000 000111245778999999999999998 9999999764
No 134
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.6e-36 Score=326.82 Aligned_cols=272 Identities=22% Similarity=0.392 Sum_probs=208.2
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECCC-----CeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeeccc
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQD-----GTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSS 731 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 731 (988)
....++|++.+.||+|+||.||+|.+... ...||+|++.... ......+.+|+.+++++ +|+||+++++++..
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 34456789999999999999999998533 3789999987432 23345688999999999 89999999998643
Q ss_pred ccccCCCceEEEEeeccccchhhhcCCCCCCCchhh-----hHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCC
Q 001974 732 IDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVE-----IEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLK 806 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 806 (988)
++..++||||+++|+|.+++........... .....+++..++.++.|++.||+|||+. +|+|||||
T Consensus 88 -----~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlk 159 (293)
T cd05053 88 -----EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLA 159 (293)
T ss_pred -----CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccc
Confidence 4778999999999999999975431110000 1124789999999999999999999998 99999999
Q ss_pred CCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCc
Q 001974 807 PGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDV 885 (988)
Q Consensus 807 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~ 885 (988)
|+||++++++.+||+|||.++.......... .....++..|+|||++.+..++.++|||||||++||+++ |..||..
T Consensus 160 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 160 ARNVLVTEDHVMKIADFGLARDIHHIDYYRK--TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred eeeEEEcCCCeEEeCccccccccccccceec--cCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCC
Confidence 9999999999999999999986544221111 112235678999999988899999999999999999998 9998753
Q ss_pred cccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 886 MFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
.. ....... +. .......+..++..+.+++.+||..||++|||+.|++
T Consensus 238 ~~-----~~~~~~~-----~~----------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil 285 (293)
T cd05053 238 IP-----VEELFKL-----LK----------------------EGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLV 285 (293)
T ss_pred CC-----HHHHHHH-----HH----------------------cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 21 1010000 00 0001112335677899999999999999999999999
Q ss_pred HHHHHHH
Q 001974 966 HELQSVK 972 (988)
Q Consensus 966 ~~L~~i~ 972 (988)
+.|+++.
T Consensus 286 ~~l~~~~ 292 (293)
T cd05053 286 EDLDRML 292 (293)
T ss_pred HHHHHhh
Confidence 9999874
No 135
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.7e-36 Score=343.11 Aligned_cols=256 Identities=21% Similarity=0.266 Sum_probs=197.9
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++.+ .+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 36899999999999999999999899999999986432 22345688999999999999999999985 45588
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~-----------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ik 141 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG-----------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIK 141 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEE
Confidence 999999999999999996543 578888999999999999999998 999999999999999999999
Q ss_pred Eeeeccccccccccc---------------------------------------ccceeccccccccccccCcccCCCCC
Q 001974 820 VGDFGLARVRQEVSN---------------------------------------LTQSCSVGVRGTIGYAAPEYGLGSEV 860 (988)
Q Consensus 820 L~DfG~a~~~~~~~~---------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~ 860 (988)
|+|||+|........ ..........||+.|+|||++.+..+
T Consensus 142 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~ 221 (376)
T cd05598 142 LTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGY 221 (376)
T ss_pred EEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCC
Confidence 999999853211000 00000113469999999999999999
Q ss_pred CCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchh
Q 001974 861 STNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECP 940 (988)
Q Consensus 861 ~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (988)
+.++|||||||++|||++|+.||...... ..... +..+. .. ........++
T Consensus 222 ~~~~DiwSlGvilyell~G~~Pf~~~~~~-----~~~~~-----i~~~~-~~------------------~~~~~~~~~s 272 (376)
T cd05598 222 TQLCDWWSVGVILYEMLVGQPPFLADTPA-----ETQLK-----VINWE-TT------------------LHIPSQAKLS 272 (376)
T ss_pred CcceeeeeccceeeehhhCCCCCCCCCHH-----HHHHH-----HhccC-cc------------------ccCCCCCCCC
Confidence 99999999999999999999998642111 00000 00000 00 0001112456
Q ss_pred HHHHHHhhcccCcCCCCCC---CHHHHHHH
Q 001974 941 ISMVRIGVACSVESPQDRM---SITNVVHE 967 (988)
Q Consensus 941 ~~l~~li~~cl~~dP~~RP---s~~evl~~ 967 (988)
.++.+++.+|+ .+|.+|+ ++.|+++.
T Consensus 273 ~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 273 REASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred HHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 67888998876 5999999 88988865
No 136
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.9e-35 Score=319.83 Aligned_cols=265 Identities=25% Similarity=0.411 Sum_probs=203.2
Q ss_pred CCCCceeccccceeEEEEEECCC---CeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccc-cCCC
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQD---GTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDF-QGND 738 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 738 (988)
|.+.+.||+|+||.||+|....+ +..||+|+++.... .....+.+|++.++.++||||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56789999999999999998643 37899999874432 234578999999999999999999998754321 2234
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+++|+|..++........ ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~-----~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~ 152 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGL-----PEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTV 152 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCC-----cccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeE
Confidence 57999999999999999854332111 13688999999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||.++.......... .....++..|+|||++.+..++.++|||||||++|||++ |..||...... ...
T Consensus 153 kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-----~~~ 225 (273)
T cd05035 153 CVADFGLSKKIYSGDYYRQ--GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-----EIY 225 (273)
T ss_pred EECCccceeeccccccccc--cccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-----HHH
Confidence 9999999986543322111 111235678999999988899999999999999999999 88887532110 000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
+.+. +. .....+..++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 226 -----~~~~---~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 226 -----DYLR---HG-------------------NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -----HHHH---cC-------------------CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 00 00112235677899999999999999999999999999875
No 137
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.7e-36 Score=324.32 Aligned_cols=266 Identities=23% Similarity=0.378 Sum_probs=202.6
Q ss_pred hhCCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDF 734 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 734 (988)
..++|++.+.||+|+||.||+|.+. ..++.||+|++.... ......+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~---- 79 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS---- 79 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc----
Confidence 5678999999999999999999864 235679999985432 233456889999999999999999999854
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 814 (988)
.+...++||||+++++|.+++........ .......+++..+..++.|++.|++|||+. +++||||||+||++++
T Consensus 80 -~~~~~~lv~e~~~~~~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 80 -QGQPTLVIMELMTRGDLKSYLRSLRPEME-NNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 154 (277)
T ss_pred -CCCCeEEEEecCCCCCHHHHHHHcCcccc-ccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcC
Confidence 44788999999999999999865332110 000113468889999999999999999998 9999999999999999
Q ss_pred CCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcch
Q 001974 815 DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNL 893 (988)
Q Consensus 815 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~ 893 (988)
++.++|+|||+++.......... .....++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 155 ~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~----- 227 (277)
T cd05062 155 DFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN----- 227 (277)
T ss_pred CCCEEECCCCCccccCCcceeec--CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----
Confidence 99999999999875433221111 111235778999999998899999999999999999999 7888753211
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
........ .. .....+..++..+.+++.+||+.||++|||+.|+++.|+
T Consensus 228 ~~~~~~~~--------~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 228 EQVLRFVM--------EG-------------------GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHH--------cC-------------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 01110000 00 000112346778999999999999999999999999876
No 138
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.2e-35 Score=317.14 Aligned_cols=249 Identities=26% Similarity=0.431 Sum_probs=196.4
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
+.||+|+||.||+|++..+++.||+|.+.... ......+.+|++++++++||||++++++|.. ....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-----KQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----CCCeEEEEeec
Confidence 46899999999999998899999999876432 2334678999999999999999999999643 47789999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 76 ~~~~L~~~~~~~~----------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 142 (252)
T cd05084 76 QGGDFLTFLRTEG----------PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSR 142 (252)
T ss_pred cCCcHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCc
Confidence 9999999986543 2578999999999999999999998 99999999999999999999999999987
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVI 906 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (988)
......... .......+..|+|||.+.+..++.++|||||||++|||++ |..||...... ...
T Consensus 143 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------------~~~ 206 (252)
T cd05084 143 EEEDGVYAS--TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------------QTR 206 (252)
T ss_pred ccccccccc--cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------------HHH
Confidence 543211100 0011123567999999999899999999999999999998 88887532110 000
Q ss_pred hhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 907 DIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 907 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
..+... .....+..++..+.+++.+||+.+|++|||+.|+.+.|+
T Consensus 207 ~~~~~~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 207 EAIEQG------------------VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHcC------------------CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 000000 001112346778999999999999999999999999876
No 139
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-37 Score=324.44 Aligned_cols=244 Identities=27% Similarity=0.362 Sum_probs=197.1
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
|.-.+.||.|+||.||.|++..+.+.||||.+.... .+.-.++.+|++.+.+++|||++.+-|++. .+...|
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-----re~TaW 102 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-----REHTAW 102 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-----ccchHH
Confidence 445688999999999999999999999999996433 233468999999999999999999999854 447889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||| -|+-.+++.-.+ +++.+.++..|+.+.+.||+|||+. +.||||||+.|||+++.|.|||+
T Consensus 103 LVMEYC-lGSAsDlleVhk----------KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLa 168 (948)
T KOG0577|consen 103 LVMEYC-LGSASDLLEVHK----------KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLA 168 (948)
T ss_pred HHHHHH-hccHHHHHHHHh----------ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeec
Confidence 999999 678888875443 5789999999999999999999999 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|||.|....+. ..++|||.|||||++. .+.|+-++||||+|++..|+...++|+-.+.. + .+-
T Consensus 169 DFGSAsi~~PA--------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA----M--SAL 234 (948)
T KOG0577|consen 169 DFGSASIMAPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----M--SAL 234 (948)
T ss_pred cccchhhcCch--------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH----H--HHH
Confidence 99999865442 2367999999999865 47899999999999999999999999643210 0 011
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..+.+ --.|.+. .. +....+.+++..|+++-|.+|||.+++++
T Consensus 235 YHIAQ----NesPtLq--s~-------------------eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 235 YHIAQ----NESPTLQ--SN-------------------EWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHh----cCCCCCC--Cc-------------------hhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 11111 1111111 12 34567899999999999999999998774
No 140
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.6e-36 Score=323.32 Aligned_cols=256 Identities=21% Similarity=0.301 Sum_probs=201.6
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|++.+.||+|+||.||+|++..+++.||+|++..........+.+|+.++++++||||+++++++. .++..+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEE
Confidence 357999999999999999999998899999999997555445567889999999999999999999864 347889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++.... .+++.++..++.|++.|++|||+. +|+||||+|+||++++++.+||+
T Consensus 83 iv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~ 148 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTG-----------PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLA 148 (267)
T ss_pred EEEeCCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEC
Confidence 9999999999999886432 578899999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|||++........ ......++..|+|||.+. ...++.++|||||||++|||++|+.||......+.
T Consensus 149 dfg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~------- 217 (267)
T cd06646 149 DFGVAAKITATIA----KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA------- 217 (267)
T ss_pred cCccceeeccccc----ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-------
Confidence 9999986532211 112245888999999874 34578899999999999999999999753211100
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
...+..... ...........+.++.+++.+||+.+|++|||++++++.+
T Consensus 218 ------~~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 218 ------LFLMSKSNF---------------QPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ------heeeecCCC---------------CCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 000000000 0000011124567899999999999999999999998753
No 141
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.9e-35 Score=319.53 Aligned_cols=265 Identities=24% Similarity=0.398 Sum_probs=201.8
Q ss_pred CCCCceeccccceeEEEEEECCCCe--EEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccc-cCCCc
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGT--IVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDF-QGNDF 739 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 739 (988)
|.+.+.||+|+||.||+|++..+++ .||+|.++.. .....+.+..|+.+++.++|+||++++++|..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999999976665 6999988643 23345678899999999999999999998754311 12235
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++........ ...+++..+..++.|++.||+|||++ +|+||||||+||++++++.+|
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 152 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDC-----PQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVC 152 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCC-----cccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEE
Confidence 7899999999999988743321110 13588999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||+++......... ......+++.|+|||+..+..++.++||||||+++|||++ |+.||...... ...
T Consensus 153 l~Dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~- 224 (272)
T cd05075 153 VADFGLSKKIYNGDYYR--QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-----EIY- 224 (272)
T ss_pred ECCCCcccccCccccee--cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-----HHH-
Confidence 99999998654322111 1112235678999999999999999999999999999999 88888632110 000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
+.+.. ......+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 225 ----~~~~~----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 225 ----DYLRQ----------------------GNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ----HHHHc----------------------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00000 000111235667799999999999999999999999999874
No 142
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.3e-35 Score=321.79 Aligned_cols=260 Identities=25% Similarity=0.416 Sum_probs=204.9
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCe----EEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGT----IVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
.++|+..++||+|+||+||+|++..+++ .||+|+++... ....+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 4578899999999999999999876665 48999986433 2334678899999999999999999998643
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
...++++||+++|+|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~----------~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~ 146 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENK----------DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPN 146 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCC
Confidence 44679999999999999987543 2588999999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 895 (988)
.+||+|||+++......... ......++..|+|||...+..++.++|||||||++|||++ |..||+..... ..
T Consensus 147 ~~kL~dfG~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~-- 220 (279)
T cd05109 147 HVKITDFGLARLLDIDETEY--HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EI-- 220 (279)
T ss_pred cEEECCCCceeeccccccee--ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HH--
Confidence 99999999998664322111 1112235678999999998899999999999999999998 99998632110 00
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
...+... .....+..++.++.+++.+||+.||++||++.|+++.++++...
T Consensus 221 ----------~~~~~~~------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 221 ----------PDLLEKG------------------ERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred ----------HHHHHCC------------------CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 0000000 00111234667899999999999999999999999999887543
No 143
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.4e-36 Score=341.22 Aligned_cols=203 Identities=23% Similarity=0.318 Sum_probs=171.8
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.|+.+++||+|+||+||+|+...+++.||+|++.... ......+.+|++++++++||||+++++++. +++..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCCEE
Confidence 5889999999999999999999899999999986432 233457889999999999999999999854 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~-----------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL 142 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG-----------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKL 142 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEE
Confidence 99999999999999986543 578888999999999999999998 9999999999999999999999
Q ss_pred eeeccccccccccc-------------------------------------------ccceeccccccccccccCcccCC
Q 001974 821 GDFGLARVRQEVSN-------------------------------------------LTQSCSVGVRGTIGYAAPEYGLG 857 (988)
Q Consensus 821 ~DfG~a~~~~~~~~-------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~ 857 (988)
+|||+++....... ..........||+.|+|||++.+
T Consensus 143 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 222 (382)
T cd05625 143 TDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR 222 (382)
T ss_pred eECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC
Confidence 99999753211000 00000123468999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 858 SEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 858 ~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
..++.++||||+||++|||++|+.||..
T Consensus 223 ~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 223 TGYTQLCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred CCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999863
No 144
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.7e-35 Score=316.70 Aligned_cols=249 Identities=23% Similarity=0.404 Sum_probs=196.4
Q ss_pred eeccccceeEEEEEE--CCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 670 LIGMGSFGSVYKGAF--DQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 670 ~lg~G~~g~Vy~a~~--~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
.||+|+||.||+|.+ ..+++.||+|+++.... ...+.+.+|+.+++.++||||+++++++. ++..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 589999999999975 45678999999864432 23467899999999999999999999853 256789999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
|+++++|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||.
T Consensus 76 ~~~~~~L~~~l~~~~-----------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~ 141 (257)
T cd05116 76 LAELGPLNKFLQKNK-----------HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGL 141 (257)
T ss_pred cCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCcc
Confidence 999999999986432 578899999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhh
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
++.......... ......++..|+|||.+....++.++|||||||++|||++ |+.||...... ...
T Consensus 142 ~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~------- 208 (257)
T cd05116 142 SKALGADENYYK-AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-----EVT------- 208 (257)
T ss_pred ccccCCCCCeee-ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH-------
Confidence 986543322111 1112234678999999988889999999999999999998 99998632111 000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
+.+... .....+..++.++.+++.+||+.||++||++++|++.|++.
T Consensus 209 --~~i~~~------------------~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 209 --QMIESG------------------ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --HHHHCC------------------CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 000000 00112235778899999999999999999999999998763
No 145
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.4e-35 Score=323.59 Aligned_cols=270 Identities=25% Similarity=0.420 Sum_probs=208.8
Q ss_pred CCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.+|.+.+.||+|+||.||+|++. .++..|++|.++.......+.+.+|++++++++|+||+++++++. .+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-----DG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----cC
Confidence 45788899999999999999863 245679999987655555578999999999999999999999964 34
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCch-----hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKD-----VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
+..++||||+++++|.+++......... .......+++..++.++.||+.|++|||++ +|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 7789999999999999999754321100 000113589999999999999999999998 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDL 891 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~ 891 (988)
+.++.++|+|||++......... .......++..|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-- 232 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDYY--RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT-- 232 (291)
T ss_pred ccCCcEEECCCCcccccCCCcee--ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 99999999999999754432211 11122346788999999999999999999999999999999 99997532111
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
..... ... .. ....+..++..+.+++.+||+.||++|||+++|+++|+++
T Consensus 233 ---~~~~~-~~~-------~~-------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 233 ---EVIEC-ITQ-------GR-------------------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred ---HHHHH-HhC-------CC-------------------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 00000 000 00 0011224567899999999999999999999999999999
Q ss_pred HHH
Q 001974 972 KNA 974 (988)
Q Consensus 972 ~~~ 974 (988)
.+.
T Consensus 283 ~~~ 285 (291)
T cd05094 283 GKA 285 (291)
T ss_pred Hhh
Confidence 764
No 146
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.2e-36 Score=337.14 Aligned_cols=257 Identities=21% Similarity=0.274 Sum_probs=199.1
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
....++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++++ .
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-----~ 113 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF-----Q 113 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----E
Confidence 34457899999999999999999999989999999998632 222345678899999999999999999984 4
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
+++..++||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+|||++++
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~~------------~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~ 178 (370)
T cd05621 114 DDKYLYMVMEYMPGGDLVNLMSNY------------DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKH 178 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhc------------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCC
Confidence 458899999999999999998542 467888999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCC----CCCCccchHHHHHHHHHHHhCCCCCCccccCCc
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS----EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDL 891 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 891 (988)
+.+||+|||+|......... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||....
T Consensus 179 ~~~kL~DFG~a~~~~~~~~~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~---- 251 (370)
T cd05621 179 GHLKLADFGTCMKMDETGMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS---- 251 (370)
T ss_pred CCEEEEecccceecccCCce---ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC----
Confidence 99999999999865432211 11234699999999998754 37889999999999999999999986321
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCC--CCCHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQD--RMSITNVVHE 967 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 967 (988)
...... .+.+..... ........+..+.+++.+|+..+|.+ ||+++|+++.
T Consensus 252 -~~~~~~--------~i~~~~~~~----------------~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 252 -LVGTYS--------KIMDHKNSL----------------NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -HHHHHH--------HHHhCCccc----------------CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 111110 011100000 00111245667889999999865544 8899998875
No 147
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-35 Score=317.46 Aligned_cols=250 Identities=28% Similarity=0.447 Sum_probs=200.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
++|++.+.||+|+||.||+|.. .|+.||+|.++.. ...+.+.+|+.++++++|+|++++++++. ..+...++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceEE
Confidence 4688999999999999999987 5788999998643 23467899999999999999999998753 33467899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++..... ..+++..++.++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 78 v~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~d 145 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGR---------SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSD 145 (256)
T ss_pred EEECCCCCcHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecC
Confidence 9999999999999875432 2478899999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||++........ ...++..|+|||++.+..++.++|||||||++|||++ |+.||... ........
T Consensus 146 fg~~~~~~~~~~-------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~-- 211 (256)
T cd05082 146 FGLTKEASSTQD-------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPR-- 211 (256)
T ss_pred CccceeccccCC-------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHH--
Confidence 999875433211 1234668999999998889999999999999999998 99997632 11111100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
+. .. ........+++.+.+++.+||+.+|++|||++++++.|+++
T Consensus 212 ---~~----~~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 212 ---VE----KG------------------YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ---Hh----cC------------------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 00 00 00011235678899999999999999999999999998753
No 148
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.7e-35 Score=319.13 Aligned_cols=259 Identities=23% Similarity=0.453 Sum_probs=203.9
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCe---EEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGT---IVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~---~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.++|+..+.||+|+||.||+|....+++ .||+|.++... ....+.+.+|++++++++|||++++.+++. ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-----KF 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----cC
Confidence 4568889999999999999999865554 79999986442 334567889999999999999999999964 34
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~ 145 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHD----------GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLE 145 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCc
Confidence 77899999999999999986543 2588999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
+||+|||++........... .......+..|+|||++.+..++.++|||||||++||+++ |+.||...... ..
T Consensus 146 ~kl~dfg~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-----~~ 219 (268)
T cd05063 146 CKVSDFGLSRVLEDDPEGTY-TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-----EV 219 (268)
T ss_pred EEECCCccceecccccccce-eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HH
Confidence 99999999976543222111 1111223567999999988889999999999999999998 99998532110 00
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
. ..+.. . ........++.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 220 ~-----~~i~~---~-------------------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 220 M-----KAIND---G-------------------FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred H-----HHHhc---C-------------------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 00000 0 00111235677899999999999999999999999999875
No 149
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-35 Score=333.93 Aligned_cols=204 Identities=25% Similarity=0.279 Sum_probs=170.9
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeeccccc-ccC
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSID-FQG 736 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 736 (988)
...++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+.+++.++||||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3467899999999999999999999889999999998643 2233467888999999999999999999865331 123
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
....++||||++ +++.+++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~-------------~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~ 156 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQ-------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 156 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHh-------------hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCC
Confidence 346799999995 56766653 2478888999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
.+||+|||+++....... .....||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~~kl~Dfg~~~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 157 TLKILDFGLARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred CEEEeeCcccccCCCccc-----cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999986543221 1224589999999999999999999999999999999999999863
No 150
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.1e-35 Score=315.71 Aligned_cols=250 Identities=24% Similarity=0.424 Sum_probs=195.8
Q ss_pred eeccccceeEEEEEEC--CCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEee
Q 001974 670 LIGMGSFGSVYKGAFD--QDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEF 746 (988)
Q Consensus 670 ~lg~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 746 (988)
.||+|+||.||+|.+. ..+..||+|++..... ...+.+.+|+.++++++||||+++++++.. +..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 4899999999999874 3456799999865432 234568999999999999999999998632 467999999
Q ss_pred ccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeeccc
Q 001974 747 MTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLA 826 (988)
Q Consensus 747 ~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 826 (988)
+++++|.+++.... ..+++.+++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++
T Consensus 76 ~~~~~L~~~l~~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~ 142 (257)
T cd05115 76 ASGGPLNKFLSGKK----------DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLS 142 (257)
T ss_pred CCCCCHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCcc
Confidence 99999999986543 2688999999999999999999998 9999999999999999999999999999
Q ss_pred ccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhh
Q 001974 827 RVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHV 905 (988)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 905 (988)
........... ......++..|+|||++.+..++.++|||||||++||+++ |..||...... ...
T Consensus 143 ~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~-------- 208 (257)
T cd05115 143 KALGADDSYYK-ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP-----EVM-------- 208 (257)
T ss_pred ccccCCcccee-ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH-----HHH--------
Confidence 75443222111 1111224578999999988889999999999999999996 99998643111 000
Q ss_pred hhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 906 IDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 906 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
..+... .....+..+++++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 209 -~~~~~~------------------~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 209 -SFIEQG------------------KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred -HHHHCC------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 000000 00112235678899999999999999999999999999875
No 151
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.1e-35 Score=317.70 Aligned_cols=252 Identities=25% Similarity=0.423 Sum_probs=199.1
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
++|++.+.||+|+||.||.|.+. .+..||+|.++... .....+.+|+.++++++||||+++++++.. .+..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-----QRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-----CCCcEE
Confidence 46888999999999999999885 45569999886432 234678999999999999999999999643 366899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++.... ..+++.+++.++.||+.||+|||+. +++|+||||+||++++++.+||+|
T Consensus 77 v~e~~~~~~l~~~i~~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d 143 (256)
T cd05113 77 VTEYMSNGCLLNYLREHG----------KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSD 143 (256)
T ss_pred EEEcCCCCcHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECC
Confidence 999999999999986543 2578999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.++....... .......++..|+|||...+..++.++|||||||++|||++ |+.||...... ...
T Consensus 144 ~g~~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~---- 211 (256)
T cd05113 144 FGLSRYVLDDEY---TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-----ETV---- 211 (256)
T ss_pred CccceecCCCce---eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHH----
Confidence 999875533221 11122346678999999988889999999999999999999 99998632110 000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
..+... .....+...+..+.+++.+||+.+|.+||++.++++.++
T Consensus 212 -~~~~~~----------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 212 -EKVSQG----------------------LRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -HHHhcC----------------------CCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 000000 000111234677899999999999999999999998763
No 152
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.3e-35 Score=325.42 Aligned_cols=271 Identities=25% Similarity=0.406 Sum_probs=204.9
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeE--EEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTI--VAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 737 (988)
.++|++.+.||+|+||.||+|.+..++.. +|+|.++... ......+.+|++++.++ +||||+++++++. .+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-----~~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HR 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-----CC
Confidence 35688899999999999999998767754 5777765322 23345788999999999 8999999999954 34
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchh-----hhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDV-----EIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
+..++||||+++++|.+++........+. ......+++.+++.++.|++.|++|||+. +++||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 77899999999999999997543211000 00113588999999999999999999998 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDL 891 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~ 891 (988)
++++.+||+|||++........ .....++..|+|||++.+..++.++|||||||++|||+| |..||.....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--- 229 (303)
T cd05088 158 GENYVAKIADFGLSRGQEVYVK-----KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--- 229 (303)
T ss_pred cCCCcEEeCccccCcccchhhh-----cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh---
Confidence 9999999999999864221110 111224668999999988889999999999999999998 9999853211
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
..... .+.. . .....+..++.++.+++.+||+.+|++||++++++..++++
T Consensus 230 --~~~~~-----~~~~---~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 230 --AELYE-----KLPQ---G-------------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred --HHHHH-----HHhc---C-------------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00000 0000 0 00011224567789999999999999999999999999988
Q ss_pred HHHhhh
Q 001974 972 KNALLE 977 (988)
Q Consensus 972 ~~~~~~ 977 (988)
.+.-..
T Consensus 281 ~~~~~~ 286 (303)
T cd05088 281 LEERKT 286 (303)
T ss_pred HHhhhh
Confidence 665443
No 153
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.9e-35 Score=317.00 Aligned_cols=254 Identities=28% Similarity=0.513 Sum_probs=201.5
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|++.++||+|+||.||+|.+. ++..||+|.++.... ..+.+.+|+.++++++|++++++++++. ....+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIY 76 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcE
Confidence 457899999999999999999876 667799999875433 3467899999999999999999998853 24578
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++..... ..+++.+++.++.|++.||+|||+. +++||||||+||++++++.++|+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~ 144 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEG---------RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIA 144 (260)
T ss_pred EEEEecCCCcHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeC
Confidence 99999999999999875431 3578999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||.+......... ......++..|+|||+..+..++.++||||||+++|||++ |..||..... ......
T Consensus 145 dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~- 215 (260)
T cd05070 145 DFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN-----REVLEQ- 215 (260)
T ss_pred CceeeeeccCcccc---cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH-
Confidence 99999765432211 1112235678999999988889999999999999999999 8999863211 000000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
+ ... .....+...+..+.+++.+|++.+|++|||++++.+.|++
T Consensus 216 ----~----~~~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 216 ----V----ERG------------------YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ----H----HcC------------------CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0 000 0011123566789999999999999999999999998875
No 154
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.3e-36 Score=342.30 Aligned_cols=285 Identities=22% Similarity=0.276 Sum_probs=198.3
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeeccccccc---CC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ---GN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~---~~ 737 (988)
..++|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++||||+++++++....+. ..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 3467999999999999999999998899999999885322 3345799999999999999998876433221 22
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC-
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM- 816 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 816 (988)
...++||||++ +++.+++...... ...+++..++.++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~~~-------~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~ 208 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYARN-------NHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTH 208 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCC
Confidence 34679999995 5777666432110 13688999999999999999999998 999999999999999664
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
.+||+|||+|+....... .....||+.|+|||++.+ ..++.++|||||||++|||++|.+||...... ..+..
T Consensus 209 ~vkL~DFGla~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~ 282 (440)
T PTZ00036 209 TLKLCDFGSAKNLLAGQR-----SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVR 282 (440)
T ss_pred ceeeeccccchhccCCCC-----cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHH
Confidence 799999999986543221 122458999999999876 46899999999999999999999998632111 00111
Q ss_pred HHHHHHhhhhhh---hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH--HHH
Q 001974 896 YARTALLDHVID---IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE--LQS 970 (988)
Q Consensus 896 ~~~~~~~~~~~~---~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~ 970 (988)
... .......+ ...+.... ..+.......+. ...+...+.++.+++.+||+.||.+|||+.|+++. ++.
T Consensus 283 i~~-~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~l~---~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 283 IIQ-VLGTPTEDQLKEMNPNYAD--IKFPDVKPKDLK---KVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred HHH-HhCCCCHHHHHHhchhhhc--ccCCccCchhHH---HHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 100 00000000 00000000 000000000000 11123467789999999999999999999999854 444
Q ss_pred HH
Q 001974 971 VK 972 (988)
Q Consensus 971 i~ 972 (988)
+.
T Consensus 357 ~~ 358 (440)
T PTZ00036 357 LR 358 (440)
T ss_pred hh
Confidence 44
No 155
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.6e-35 Score=316.77 Aligned_cols=251 Identities=28% Similarity=0.433 Sum_probs=199.3
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
.+|++.+.||+|+||.||+|.+. ++..+|+|++.... .....+.+|++++++++||||+++++++. ..+..++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceEE
Confidence 45888999999999999999986 56789999986332 23457889999999999999999999854 3477899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.+||+|
T Consensus 77 v~e~~~~~~L~~~l~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d 143 (256)
T cd05059 77 VTEYMANGCLLNYLRERK----------GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSD 143 (256)
T ss_pred EEecCCCCCHHHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECC
Confidence 999999999999987543 2578999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.++........ ......++..|+|||.+.+..++.++||||||+++||+++ |+.||...... ...
T Consensus 144 fg~~~~~~~~~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~---- 211 (256)
T cd05059 144 FGLARYVLDDQYT---SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS-----EVV---- 211 (256)
T ss_pred cccceeccccccc---ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH-----HHH----
Confidence 9999765332111 1112234568999999998899999999999999999999 89998632111 000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
..+... .....+..++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 212 -~~~~~~----------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 212 -ESVSAG----------------------YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -HHHHcC----------------------CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 000000 00112234678899999999999999999999999876
No 156
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=5.9e-36 Score=331.22 Aligned_cols=238 Identities=27% Similarity=0.346 Sum_probs=187.7
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHH-HHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECK-ALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||+||+|++..+|+.||+|++.... ......+..|.. +++.++||||+++++++. .++..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~-----~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-----TADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEE-----eCCEEEEEE
Confidence 47999999999999999999999999986432 122334555554 467789999999998853 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg 141 (323)
T cd05575 76 DYVNGGELFFHLQRER-----------SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFG 141 (323)
T ss_pred cCCCCCCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccC
Confidence 9999999999886543 578889999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... +.........
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~~~~~i~--- 209 (323)
T cd05575 142 LCKEGIEHSK----TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DTAEMYDNIL--- 209 (323)
T ss_pred CCcccccCCC----ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC-----CHHHHHHHHH---
Confidence 9874322111 122345899999999999999999999999999999999999998632 1111111000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT 962 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 962 (988)
. .........+.++.+++.+|++.||++||++.
T Consensus 210 -----~--------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 210 -----N--------------------KPLRLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -----c--------------------CCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 0 00111224577899999999999999999985
No 157
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.5e-35 Score=315.52 Aligned_cols=251 Identities=27% Similarity=0.414 Sum_probs=198.5
Q ss_pred ceeccccceeEEEEEECCCC---eEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDG---TIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
++||+|+||.||+|.+...+ ..||+|.+..... ...+++.+|+++++++.|+||+++++++. .+..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 47999999999999875544 7899999874433 24567899999999999999999999853 25679999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 75 e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~ 140 (257)
T cd05060 75 ELAPLGPLLKYLKKRR-----------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFG 140 (257)
T ss_pred EeCCCCcHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccc
Confidence 9999999999997543 578999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
.++......... .......++..|+|||...+..++.++|||||||++|||++ |..||..... ....... ..
T Consensus 141 ~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~----~~ 213 (257)
T cd05060 141 MSRALGAGSDYY-RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAML----ES 213 (257)
T ss_pred ccceeecCCccc-ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH----Hc
Confidence 998654332211 11111224568999999998899999999999999999998 9999864211 0111100 00
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
. .....+..++..+.+++.+||..+|++||++.++++.|+++.
T Consensus 214 --------~------------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 214 --------G------------------ERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred --------C------------------CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0 001122356778999999999999999999999999998863
No 158
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.1e-35 Score=328.81 Aligned_cols=242 Identities=23% Similarity=0.313 Sum_probs=192.2
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcC-CCCceEEEeecccccccCCCc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 739 (988)
+|+..+.||+|+||+||+|++..+|+.||+|+++... ....+.+..|..+++.+. |++|+++++++ ...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecCCE
Confidence 4778899999999999999999899999999987432 233456778889988885 57788888874 34578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++.++..++.||+.||+|||++ +|+||||||+||++++++.+|
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~-----------~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ik 141 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG-----------KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEE
Confidence 999999999999999986543 688999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......
T Consensus 142 L~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~~ 212 (323)
T cd05615 142 IADFGMCKEHMVDGV----TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-----DELFQS 212 (323)
T ss_pred EeccccccccCCCCc----cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHH
Confidence 999999875322111 12234589999999999998999999999999999999999999863211 001000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI 961 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 961 (988)
+. ......+...+.++.+++.+|++.+|++|++.
T Consensus 213 -----i~-----------------------~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 213 -----IM-----------------------EHNVSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -----HH-----------------------hCCCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 00 00011123456678999999999999999985
No 159
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3e-35 Score=317.01 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=207.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|....+|+.||+|.++.. .....+.+.+|++++++++|+|++++++++. .++.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 5799999999999999999999889999999988632 2233567889999999999999999999854 3478
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++....... ..+++.+++.++.|++.|++|||+. +|+||||+|+||+++.++.++
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~ 146 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQK-------RLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccC-------CCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEE
Confidence 899999999999999986432111 3578999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||.+......... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||.... .........
T Consensus 147 l~d~~~~~~~~~~~~~----~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~ 219 (267)
T cd08224 147 LGDLGLGRFFSSKTTA----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKK 219 (267)
T ss_pred EeccceeeeccCCCcc----cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhh
Confidence 9999998754332111 122357889999999998889999999999999999999999975321 111111100
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
+.. ..... ......+..+.+++.+||..+|++|||+.+|++.++++.
T Consensus 220 -----~~~---~~~~~------------------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 220 -----IEK---CDYPP------------------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -----hhc---CCCCC------------------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 000 00000 001145667899999999999999999999999999874
No 160
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.1e-35 Score=316.19 Aligned_cols=254 Identities=22% Similarity=0.315 Sum_probs=201.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-----chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-----GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
++|+..+.||+|++|.||.|....+++.||+|.+..... ...+.+.+|++++++++||||+++++++. .+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLR-----DD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEc-----cC
Confidence 578999999999999999999988999999999864321 12356888999999999999999999954 44
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..++|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~ 142 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG-----------ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGN 142 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCC
Confidence 78999999999999999886542 578889999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
++|+|||.++......... .......++..|+|||++.+..++.++||||+|+++|||++|+.||..... .....
T Consensus 143 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~ 217 (263)
T cd06625 143 VKLGDFGASKRLQTICSSG-TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIF 217 (263)
T ss_pred EEEeecccceecccccccc-ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHH
Confidence 9999999997654322111 111223478899999999998899999999999999999999999863210 00000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
. .... ......+..++..+.+++.+||..+|++|||+.|+++.
T Consensus 218 -~--------~~~~------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 218 -K--------IATQ------------------PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -H--------Hhcc------------------CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 0 0000 00011223566789999999999999999999999864
No 161
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.3e-35 Score=316.98 Aligned_cols=256 Identities=23% Similarity=0.431 Sum_probs=194.7
Q ss_pred ceeccccceeEEEEEECC---CCeEEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQ---DGTIVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~---~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|.+.. .+..||+|.+... .....+.+.+|+.+++.++||||+++++++.. .++..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence 468999999999998742 3457999988532 23345678899999999999999999997643 235678999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+.+++|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||
T Consensus 77 e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg 143 (262)
T cd05058 77 PYMKHGDLRNFIRSET----------HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFG 143 (262)
T ss_pred ecCCCCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcc
Confidence 9999999999997543 2456778889999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhC-CCCCCccccCCcchHHHHHHHHhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTG-KKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
+++.................++..|+|||++.+..++.++|||||||++|||++| .+||... ........
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-----~~~~~~~~---- 214 (262)
T cd05058 144 LARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----DSFDITVY---- 214 (262)
T ss_pred ccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHH----
Confidence 9975433211111111223467789999999888999999999999999999995 5555421 10011100
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
+. .. .....+..++..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 215 -~~---~~-------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 215 -LL---QG-------------------RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred -Hh---cC-------------------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00 00 0001122456789999999999999999999999999998754
No 162
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.9e-35 Score=321.29 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=198.8
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.|+..+.||+|+||+||+|.+..+++.||+|.+.... ......+.+|++++++++|++|+++.+++. .++..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE-----TKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-----cCCEE
Confidence 3677889999999999999999899999999986432 222345788999999999999999998853 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.+||
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl 143 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGN---------PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRI 143 (285)
T ss_pred EEEEEeccCccHHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEE
Confidence 999999999999988864321 2589999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||++........ .....|+..|+|||++.+..++.++|||||||++|||++|+.||....... . ...
T Consensus 144 ~Dfg~~~~~~~~~~-----~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--~----~~~ 212 (285)
T cd05632 144 SDLGLAVKIPEGES-----IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--K----REE 212 (285)
T ss_pred ecCCcceecCCCCc-----ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--H----HHH
Confidence 99999975433211 122458999999999998899999999999999999999999986321100 0 000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC-----HHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS-----ITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 967 (988)
+...+. ..........+.++.+++.+||+.||++||+ +.++++.
T Consensus 213 ~~~~~~-----------------------~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 213 VDRRVL-----------------------ETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred HHHhhh-----------------------ccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 000000 0001112345677899999999999999999 6676653
No 163
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.8e-35 Score=320.32 Aligned_cols=263 Identities=25% Similarity=0.395 Sum_probs=203.4
Q ss_pred hhCCCCCCceeccccceeEEEEEECC-----CCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQ-----DGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDF 734 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 734 (988)
..++|.+.+.||+|++|.||+|.+.. .+..||+|.+..... .....+.+|+.++++++|+||+++++++..
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--- 80 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc---
Confidence 34678999999999999999999976 678899998864432 234578999999999999999999998543
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 814 (988)
.+..++||||+++++|.+++........ ....+++.++..++.||+.|++|||+. +++||||||+||+++.
T Consensus 81 --~~~~~lv~e~~~g~~L~~~i~~~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~ 151 (277)
T cd05036 81 --RLPRFILLELMAGGDLKSFLRENRPRPE----RPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTC 151 (277)
T ss_pred --CCCcEEEEecCCCCCHHHHHHHhCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEec
Confidence 3677999999999999999976542111 012589999999999999999999998 9999999999999986
Q ss_pred CC---cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCC
Q 001974 815 DM---IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGD 890 (988)
Q Consensus 815 ~~---~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~ 890 (988)
++ .+||+|||+++......... .......+..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 152 ~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~- 228 (277)
T cd05036 152 KGPGRVAKIADFGMARDIYRASYYR--KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ- 228 (277)
T ss_pred cCCCcceEeccCccccccCCcccee--cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 54 69999999998653322111 1111234568999999999999999999999999999997 99998632110
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
... +.+... .....+..++..+.+++.+||+.+|++|||+.+|++.|+
T Consensus 229 ----~~~---------~~~~~~------------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 ----EVM---------EFVTGG------------------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ----HHH---------HHHHcC------------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 110 000000 001123356788999999999999999999999999875
No 164
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.3e-35 Score=317.52 Aligned_cols=251 Identities=21% Similarity=0.262 Sum_probs=201.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
+|++.+.||+|+||.||++++..+++.||+|.++.. .....+.+.+|+.+++.++|+||+++++++. .++..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFE-----ADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----ECCEEEE
Confidence 478899999999999999999989999999998643 2334567889999999999999999999854 4578999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +|+|+||||+||++++++.++++|
T Consensus 76 v~e~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~d 143 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRG---------KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGD 143 (255)
T ss_pred EEeeCCCCcHHHHHHhccC---------CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcc
Confidence 9999999999998864332 2578889999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
||.+......... .....|+..|+|||++.+..++.++||||||+++|+|++|+.||... ...........
T Consensus 144 fg~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~~~~~~~~~~ 214 (255)
T cd08219 144 FGSARLLTSPGAY----ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKNLILKVCQ 214 (255)
T ss_pred cCcceeecccccc----cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCC-----CHHHHHHHHhc
Confidence 9999765432211 12345888999999999888999999999999999999999998631 11111110000
Q ss_pred hhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 903 DHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 903 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. ....+..++..+.+++.+||+.||++|||+.|++.+
T Consensus 215 ~~---------------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 215 GS---------------------------YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CC---------------------------CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00 000112355678999999999999999999999865
No 165
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-35 Score=323.72 Aligned_cols=252 Identities=22% Similarity=0.285 Sum_probs=203.5
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
..+|++.+.||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++|+||+++++.+.. +...+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-----~~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCEEE
Confidence 4579999999999999999999988999999999976655556788999999999999999999998543 47899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++... .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 94 lv~e~~~~~~L~~~~~~~------------~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~ 158 (296)
T cd06654 94 VVMEYLAGGSLTDVVTET------------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLT 158 (296)
T ss_pred EeecccCCCCHHHHHHhc------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEC
Confidence 999999999999998532 468889999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.+........ ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+.. ..
T Consensus 159 dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~-~~ 229 (296)
T cd06654 159 DFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYL-IA 229 (296)
T ss_pred ccccchhcccccc----ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHH-Hh
Confidence 9999875433211 111235889999999999888999999999999999999999998632111 00000 00
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.... .....+...+..+.+++.+||..||++||++.|+++.
T Consensus 230 -------~~~~------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 230 -------TNGT------------------PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -------cCCC------------------CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0000 0001122456678999999999999999999999873
No 166
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.6e-36 Score=333.42 Aligned_cols=239 Identities=24% Similarity=0.319 Sum_probs=190.8
Q ss_pred ceeccccceeEEEEEE---CCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEE
Q 001974 669 HLIGMGSFGSVYKGAF---DQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~---~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
+.||+|+||.||+++. ..+|+.||+|+++.... .....+..|++++++++||||+++++++. .++..++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQ-----TEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEE-----cCCEEEEE
Confidence 6799999999999886 35789999999974322 22345778999999999999999999854 45789999
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDF 823 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 823 (988)
|||+++|+|.+++.... .+++.+++.++.||+.||+|||+. +|+||||||+||++++++.+||+||
T Consensus 77 ~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Df 142 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV-----------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDF 142 (318)
T ss_pred EcCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeec
Confidence 99999999999986542 589999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhh
Q 001974 824 GLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 824 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
|+++....... ......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 143 g~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~---- 209 (318)
T cd05582 143 GLSKESIDHEK----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMTM---- 209 (318)
T ss_pred cCCcccCCCCC----ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHHH----
Confidence 99875433211 12234689999999999988899999999999999999999999863210 000000
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITN 963 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 963 (988)
+. ......+...+..+.+++.+||+.||++||++.+
T Consensus 210 -i~-----------------------~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 210 -IL-----------------------KAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -HH-----------------------cCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 00 0011112345677899999999999999999655
No 167
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.8e-36 Score=329.10 Aligned_cols=195 Identities=28% Similarity=0.413 Sum_probs=171.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcC-C-----CCceEEEeecccccccCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIR-H-----RNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~~~~~~~~~~~~~~ 737 (988)
+|++.+.||+|+||.|.+|.+.++++.||||+++... ....+...|+.+|..++ | -|+|++++++ ...
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~fr 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----YFR 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----ccc
Confidence 7899999999999999999999999999999997443 34567788999999996 4 3899999994 456
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC-
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM- 816 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 816 (988)
++.|||+|.+ ..+|+++++.+.. ..++...++.++.||+.||.+||+. +|||+||||+|||+.+.+
T Consensus 261 ~HlciVfELL-~~NLYellK~n~f---------~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r 327 (586)
T KOG0667|consen 261 NHLCIVFELL-STNLYELLKNNKF---------RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKR 327 (586)
T ss_pred cceeeeehhh-hhhHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCc
Confidence 9999999999 7899999998875 4689999999999999999999998 999999999999996543
Q ss_pred -cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 001974 817 -IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTD 884 (988)
Q Consensus 817 -~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~ 884 (988)
.+||+|||.|........ ....+..|+|||++.+.+|+.+.||||||||++||++|.+.|.
T Consensus 328 ~~vKVIDFGSSc~~~q~vy-------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 328 SRIKVIDFGSSCFESQRVY-------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred CceeEEecccccccCCcce-------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 799999999987554322 3457889999999999999999999999999999999988765
No 168
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.8e-35 Score=321.31 Aligned_cols=252 Identities=23% Similarity=0.311 Sum_probs=199.1
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.|+..+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.++++++|++++++++.+. .++..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-----TKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-----cCCEE
Confidence 37788999999999999999999999999999864322 22345778999999999999999999854 34789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~---------~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l 143 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGE---------AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRI 143 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEE
Confidence 999999999999998854321 2588999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||++........ .....|+..|+|||++.+..++.++||||+||++|||++|+.||....... ... .
T Consensus 144 ~Dfg~~~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~-~---- 212 (285)
T cd05630 144 SDLGLAVHVPEGQT-----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KRE-E---- 212 (285)
T ss_pred eeccceeecCCCcc-----ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHH-H----
Confidence 99999875432221 112358999999999999999999999999999999999999987421110 000 0
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC-----HHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS-----ITNVVH 966 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 966 (988)
.....+. ........+++++.+++.+||+.||++||| ++|+++
T Consensus 213 ----~~~~~~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 213 ----VERLVKE-------------------VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ----HHhhhhh-------------------hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0000000 000112245677899999999999999999 888887
No 169
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.4e-35 Score=315.71 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=202.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|++|.||+|.+..+++.|++|.+... .....+.+.+|++++++++|||++++++++. .++..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence 478889999999999999999989999999998643 2344567889999999999999999999854 347899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++..... ..+++..++.++.|++.||.|||+. +++||||||+||++++++.++|+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~ 143 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRG---------RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIG 143 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEc
Confidence 99999999999999875421 3688999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||+++........ .....|+..|+|||+..+..++.++|||||||++|||++|+.||..... ......
T Consensus 144 df~~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~-- 212 (256)
T cd08529 144 DLGVAKLLSDNTNF----ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALILK-- 212 (256)
T ss_pred ccccceeccCccch----hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH--
Confidence 99998865443211 1223578899999999999999999999999999999999999863211 000000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.. . ........++.++.+++.+||+.+|++||++.++++.
T Consensus 213 ---~~~---~-------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 213 ---IIR---G-------------------VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ---HHc---C-------------------CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 000 0 0001112456779999999999999999999999863
No 170
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.3e-35 Score=326.76 Aligned_cols=277 Identities=22% Similarity=0.319 Sum_probs=199.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|.+.+.||+|+||.||+|++..+++.||+|+++.... .....+.+|+.++++++||||+++++++. .++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence 679999999999999999999988999999999874432 23356788999999999999999999854 347899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 lv~e~~~-~~l~~~~~~~~----------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~ 146 (309)
T cd07872 81 LVFEYLD-KDLKQYMDDCG----------NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLA 146 (309)
T ss_pred EEEeCCC-CCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEC
Confidence 9999995 58888876543 2578889999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||+++....... ......++..|+|||++.+ ..++.++||||+||++|||+||+.||...... +........
T Consensus 147 Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~--~~~~~~~~~ 220 (309)
T cd07872 147 DFGLARAKSVPTK----TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE--DELHLIFRL 220 (309)
T ss_pred ccccceecCCCcc----ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHH
Confidence 9999975432211 1112357899999998765 56889999999999999999999998642111 111111110
Q ss_pred Hhhhhhhhhcccccc-CcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 901 LLDHVIDIVDPILIN-DVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
......+........ ...++.. ..............++.++.+++.+|++.||++|||++|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 221 LGTPTEETWPGISSNDEFKNYNF--PKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hCCCCHHHHhhhcchhhhhhhhc--CccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000000000000 0000000 000000001112346778899999999999999999999987
No 171
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.8e-35 Score=334.17 Aligned_cols=273 Identities=22% Similarity=0.268 Sum_probs=199.6
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|+++++.++||||+++++++...........+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999889999999998632 223346788999999999999999999987644222223789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+. ++|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 81 lv~e~~~-~~l~~~~~~~-----------~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~ 145 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP-----------QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKIC 145 (372)
T ss_pred EEeeccc-cCHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEec
Confidence 9999994 6888877543 2688999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||+++........ ......++..|+|||++.+. .++.++||||+||++|||++|+.||...... .........
T Consensus 146 Dfg~a~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~ 220 (372)
T cd07853 146 DFGLARVEEPDESK---HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI--QQLDLITDL 220 (372)
T ss_pred cccceeecccCccc---cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHH
Confidence 99999865332211 11223578999999998774 5789999999999999999999998642111 000000000
Q ss_pred HhhhhhhhhccccccCcchhhhhh----HHHH--------hhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATN----KQRL--------RQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~----~~~~--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.... ...++.... .... ...........++++.+++.+||+.||++|||+.|+++.
T Consensus 221 ~g~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 221 LGTP-----------SLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred cCCC-----------CHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000 000000000 0000 000001122456788999999999999999999999864
No 172
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.9e-35 Score=322.44 Aligned_cols=268 Identities=24% Similarity=0.386 Sum_probs=204.7
Q ss_pred CCCCCceeccccceeEEEEEECC-----CCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQ-----DGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
+|++.+.||+|+||.||+|+... ....||+|.+..... .....+.+|+.+++.++||||+++++.+.. +
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ-----D 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----C
Confidence 47888999999999999998742 235789998864432 334678899999999999999999998643 4
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCch-------------hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKD-------------VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCD 804 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~-------------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 804 (988)
+..++|+||+++++|.+++......... .......+++..++.++.|++.||+|||+. +++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 6789999999999999998653221100 001124688999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCC
Q 001974 805 LKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPT 883 (988)
Q Consensus 805 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~ 883 (988)
|||+||++++++.+||+|||+++.......... .....++..|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 230 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSYVK--RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccchhc--ccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCC
Confidence 999999999999999999999975533221111 112335678999999988889999999999999999999 99998
Q ss_pred CccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHH
Q 001974 884 DVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITN 963 (988)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 963 (988)
..... .. +.+...... ....+..++.++.+++.+||+.+|++||+++|
T Consensus 231 ~~~~~-----~~---------~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~ 278 (290)
T cd05045 231 PGIAP-----ER---------LFNLLKTGY------------------RMERPENCSEEMYNLMLTCWKQEPDKRPTFAD 278 (290)
T ss_pred CCCCH-----HH---------HHHHHhCCC------------------CCCCCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 63211 00 001111000 00112346678999999999999999999999
Q ss_pred HHHHHHHHHH
Q 001974 964 VVHELQSVKN 973 (988)
Q Consensus 964 vl~~L~~i~~ 973 (988)
+++.|+++..
T Consensus 279 i~~~l~~~~~ 288 (290)
T cd05045 279 ISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHh
Confidence 9999999854
No 173
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.8e-35 Score=315.84 Aligned_cols=255 Identities=29% Similarity=0.497 Sum_probs=201.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|++.++||+|+||.||+|++..+ ..||+|+++.... ..+.+.+|++++++++||||+++++++. .+..+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcE
Confidence 45799999999999999999998644 5699999874332 3467899999999999999999998742 25578
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~ 144 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMG---------KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVA 144 (262)
T ss_pred EEEEcCCCCcHHHHHhhccc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEec
Confidence 99999999999999975321 2578899999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||.++........ ......++..|+|||+..+..++.++|||||||++|||+| |+.||...... ...
T Consensus 145 dfg~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~-----~~~--- 213 (262)
T cd05071 145 DFGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVL--- 213 (262)
T ss_pred cCCceeeccccccc---cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH-----HHH---
Confidence 99999765432211 1112346778999999988899999999999999999999 88887632110 000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
..+.. . .......+++..+.+++.+|++.||++||+++++++.|++.
T Consensus 214 --~~~~~---~-------------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 214 --DQVER---G-------------------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --HHHhc---C-------------------CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00000 0 00011235677899999999999999999999999999875
No 174
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.6e-35 Score=331.16 Aligned_cols=284 Identities=20% Similarity=0.228 Sum_probs=200.8
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccc-c
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDF-Q 735 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~ 735 (988)
....++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++..... .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 345688999999999999999999998899999999986432 2233567789999999999999999988653211 2
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.....++++|++ +++|.+++.. ..+++..+..++.||+.||+|||+. +|+||||||+||+++++
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~ 154 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKC------------QKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNED 154 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCC
Confidence 234578999998 8899888753 2588999999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
+.+||+|||+++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+.
T Consensus 155 ~~~kl~Dfg~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~ 226 (343)
T cd07878 155 CELRILDFGLARQADDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLK 226 (343)
T ss_pred CCEEEcCCccceecCCC-------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHH
Confidence 99999999999865332 123458999999999877 56889999999999999999999998632110 0000
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
... ........+............+...................++.+.+++.+|++.||++|||++|+++.
T Consensus 227 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 227 RIM-EVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHH-HHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 000000000000000000000000000000000000011345568899999999999999999999864
No 175
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.3e-35 Score=314.51 Aligned_cols=251 Identities=29% Similarity=0.496 Sum_probs=203.7
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|++.+.||+|+||.||+|.. .|+.||+|.++.... ..+.+.+|+.++++++|+||+++++++.. .+..+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-----GNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcC-----CCCeE
Confidence 45789999999999999999988 588999999975543 45788999999999999999999998543 47889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~ 144 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR---------AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVS 144 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEc
Confidence 99999999999999865432 2589999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||.++....... ....+..|+|||++.+..++.++||||||+++||+++ |..||...... .
T Consensus 145 d~g~~~~~~~~~~-------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~----- 207 (256)
T cd05039 145 DFGLAKEASQGQD-------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----D----- 207 (256)
T ss_pred ccccccccccccc-------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH-----H-----
Confidence 9999986532211 1235678999999998899999999999999999998 99998632110 0
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
....+.. . .....+..+++++.+++.+||..+|++|||++|++++|+.+
T Consensus 208 ~~~~~~~----~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 208 VVPHVEK----G------------------YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHhc----C------------------CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0000000 0 00011234678899999999999999999999999999753
No 176
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.5e-35 Score=319.34 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=206.2
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|+...+++.||||.+.... .....++.+|+.+++.++||||+++++++. .++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 46888999999999999999998899999999876432 223457889999999999999999999854 3478
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++...... ...+++..++.++.||+.|++|||+. +++|+||||+||+++.++.++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~ 146 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQ-------KRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhcc-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEE
Confidence 89999999999999988642211 13589999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||++........ ......++..|+|||++.+..++.++||||||+++|+|++|..||...... ......
T Consensus 147 l~dfg~~~~~~~~~~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~- 218 (267)
T cd08229 147 LGDLGLGRFFSSKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCK- 218 (267)
T ss_pred ECcchhhhccccCCc----ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhh-
Confidence 999999876543221 112245888999999998888999999999999999999999998532111 101000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
.+.....+. ......+.++.+++.+||+.||++|||+++|++.++++.
T Consensus 219 ----~~~~~~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 219 ----KIEQCDYPP---------------------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred ----hhhcCCCCC---------------------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 000000000 001235678999999999999999999999999998763
No 177
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.4e-35 Score=334.00 Aligned_cols=203 Identities=25% Similarity=0.281 Sum_probs=170.9
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeeccccc-ccCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSID-FQGN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~ 737 (988)
..++|++.+.||+|+||.||+|.+..+++.||||++... .....+.+.+|+.+++.++||||+++++++.... +...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999999989999999998643 2334467889999999999999999998865331 2233
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||++ +++.+++. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-------------~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 164 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQ-------------MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCT 164 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHH-------------hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCc
Confidence 56799999995 57776663 2467888999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
+||+|||+++....... .....+|..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 165 ~kL~DfG~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 165 LKILDFGLARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred EEEEeCCCccccCCCCc-----ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 99999999986543221 1224589999999999999999999999999999999999999864
No 178
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.5e-35 Score=318.32 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=198.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ++..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEE
Confidence 46888999999999999999998899999999986442 3334678899999999999999999999654 47789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|..+. .+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+
T Consensus 76 lv~e~~~~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~ 137 (279)
T cd06619 76 ICTEFMDGGSLDVYR---------------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLC 137 (279)
T ss_pred EEEecCCCCChHHhh---------------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEe
Confidence 999999999997552 467788899999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++....... .....|+..|+|||++.+..++.++|||||||++|+|++|+.||......+..... ...
T Consensus 138 dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~---~~~ 208 (279)
T cd06619 138 DFGVSTQLVNSI------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP---LQL 208 (279)
T ss_pred eCCcceeccccc------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccch---HHH
Confidence 999997543321 12245899999999999989999999999999999999999998753322111000 000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. ...+.. .. .......++++.+++.+||+.+|++||+++|+++.
T Consensus 209 ~~---~~~~~~----~~--------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 209 LQ---CIVDED----PP--------------VLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HH---HHhccC----CC--------------CCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00 000000 00 00012355678999999999999999999999875
No 179
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.5e-35 Score=328.78 Aligned_cols=274 Identities=23% Similarity=0.378 Sum_probs=205.9
Q ss_pred hhCCCCCCceeccccceeEEEEEE-----CCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeeccccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAF-----DQDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSID 733 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 733 (988)
..++|++.+.||+|+||.||+|.+ ..+++.||||+++... ......+.+|+.++.++ +||||++++++|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-- 82 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK-- 82 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec--
Confidence 346799999999999999999985 2467899999997533 23345788999999999 78999999998743
Q ss_pred ccCCCceEEEEeeccccchhhhcCCCCCCCc-------------------------------------------------
Q 001974 734 FQGNDFKALVYEFMTNGSLENWLHPDAVPQK------------------------------------------------- 764 (988)
Q Consensus 734 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------------------------- 764 (988)
.+...++||||+++|+|.+++........
T Consensus 83 --~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 83 --PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred --CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 23567899999999999999865321000
Q ss_pred -------hhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccccc
Q 001974 765 -------DVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQ 837 (988)
Q Consensus 765 -------~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~ 837 (988)
........+++.++..++.||++||+|||+. +|+||||||+||++++++.+||+|||++...........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 237 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR 237 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhh
Confidence 0001123578899999999999999999998 999999999999999999999999999976533221111
Q ss_pred eeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccC
Q 001974 838 SCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILIND 916 (988)
Q Consensus 838 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 916 (988)
.....++..|+|||.+.+..++.++||||||+++|||++ |..||....... .. .......
T Consensus 238 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~-~~~~~~~------------ 298 (343)
T cd05103 238 --KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE----EF-CRRLKEG------------ 298 (343)
T ss_pred --cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH----HH-HHHHhcc------------
Confidence 112235678999999988899999999999999999997 999986421110 00 0000000
Q ss_pred cchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 917 VEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
.....+...++++.+++.+||+.||++|||+.|+++.|+.+.++
T Consensus 299 --------------~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 299 --------------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred --------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 00011123456789999999999999999999999999988653
No 180
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.5e-35 Score=320.38 Aligned_cols=266 Identities=22% Similarity=0.382 Sum_probs=202.4
Q ss_pred CCCCCCceeccccceeEEEEEEC----CCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFD----QDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
++|++.+.||+|+||.||+|.+. ..++.||+|.++.... .....+.+|++++++++||||+++++++. .+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence 46788899999999999999852 3567899999864332 33367889999999999999999999854 44
Q ss_pred CceEEEEeeccccchhhhcCCCCCCC------chhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCee
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQ------KDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVL 811 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 811 (988)
+..++||||+++++|.+++....... .........+++.++..++.|++.||+|||+. +++||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 77899999999999999985432100 00001123578999999999999999999998 9999999999999
Q ss_pred eCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCC
Q 001974 812 LDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGD 890 (988)
Q Consensus 812 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~ 890 (988)
+++++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-- 232 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADYY--RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-- 232 (283)
T ss_pred EcCCCcEEeccccccccccCCcce--ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 999999999999999765332211 11122345778999999988889999999999999999999 9989753210
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
... .+.++.. .....+..++.++.+++.+||+.||++||++.++.+.|.+
T Consensus 233 ---~~~---------~~~~~~~------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 ---QEV---------IEMVRKR------------------QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHH---------HHHHHcC------------------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 000 0000000 0011223567889999999999999999999999998864
No 181
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.8e-35 Score=333.22 Aligned_cols=272 Identities=22% Similarity=0.337 Sum_probs=206.1
Q ss_pred HhhCCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcC-CCCceEEEeecccc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQR-HGASKSFLAECKALKNIR-HRNLVKVITSCSSI 732 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~ 732 (988)
...++|.+.+.||+|+||.||+|++. ..++.||+|+++... ....+.+.+|++++.++. ||||++++++|..
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~- 112 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK- 112 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc-
Confidence 34456888999999999999999863 345689999997442 223457889999999996 9999999999654
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCCc------------------------------------------------
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQK------------------------------------------------ 764 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~------------------------------------------------ 764 (988)
.+..++||||+++|+|.++++.......
T Consensus 113 ----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 113 ----GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred ----CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 3678999999999999999975432000
Q ss_pred ---------------------------------------hhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccC
Q 001974 765 ---------------------------------------DVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDL 805 (988)
Q Consensus 765 ---------------------------------------~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 805 (988)
........+++.+++.++.||+.||+|||+. +++||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdl 265 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDL 265 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccC
Confidence 0000112478888999999999999999998 9999999
Q ss_pred CCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCC
Q 001974 806 KPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTD 884 (988)
Q Consensus 806 kp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~ 884 (988)
||+||++++++.+||+|||+++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 266 kp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~ 343 (401)
T cd05107 266 AARNVLICEGKLVKICDFGLARDIMRDSNYIS--KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP 343 (401)
T ss_pred CcceEEEeCCCEEEEEecCcceeccccccccc--CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999986433221111 112346788999999998889999999999999999998 888976
Q ss_pred ccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHH
Q 001974 885 VMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNV 964 (988)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 964 (988)
.....+ ... ..+... .....+..++.++.+++.+||..+|++||+++||
T Consensus 344 ~~~~~~-----~~~--------~~~~~~------------------~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~el 392 (401)
T cd05107 344 ELPMNE-----QFY--------NAIKRG------------------YRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQL 392 (401)
T ss_pred CCCchH-----HHH--------HHHHcC------------------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 321110 000 000000 0011223467789999999999999999999999
Q ss_pred HHHHHHHH
Q 001974 965 VHELQSVK 972 (988)
Q Consensus 965 l~~L~~i~ 972 (988)
++.|+++.
T Consensus 393 l~~L~~~~ 400 (401)
T cd05107 393 VHLVGDLL 400 (401)
T ss_pred HHHHHHHh
Confidence 99998863
No 182
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.6e-35 Score=327.89 Aligned_cols=244 Identities=23% Similarity=0.335 Sum_probs=192.4
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|+...+++.||+|+++... ....+.+..|+.++.++ +||+|+++++++. ..+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQ-----TTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEE-----eCCEEEEEE
Confidence 47999999999999999899999999997432 23345678899999888 6999999999853 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|..++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 e~~~~~~L~~~~~~~~-----------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (327)
T cd05617 76 EYVNGGDLMFHMQRQR-----------KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYG 141 (327)
T ss_pred eCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccc
Confidence 9999999998886442 689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccC-CcchHHHHHHHHhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEG-DLNLHNYARTALLD 903 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~ 903 (988)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+.....
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~-- 215 (327)
T cd05617 142 MCKEGLGPGD----TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI-- 215 (327)
T ss_pred cceeccCCCC----ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH--
Confidence 9874322111 112346899999999999999999999999999999999999999643221 111111111100
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT 962 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 962 (988)
.......+...+..+.+++.+||+.||++|+++.
T Consensus 216 -------------------------~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 216 -------------------------LEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred -------------------------HhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 0011112334567789999999999999999853
No 183
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.4e-35 Score=317.07 Aligned_cols=259 Identities=22% Similarity=0.379 Sum_probs=205.4
Q ss_pred hCCCCCCceeccccceeEEEEEECCC---CeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQD---GTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.++|.+.+.||+|+||.||+|.+... ...||+|...... ....+.+.+|+.++++++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 35688899999999999999987533 3468999886544 3445688999999999999999999998643
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~ 145 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNK----------YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDC 145 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCC
Confidence 45689999999999999997543 2578999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
+||+|||+++......... .....++..|+|||.+....++.++||||||+++||+++ |..||...... ..
T Consensus 146 ~~l~d~g~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~ 217 (270)
T cd05056 146 VKLGDFGLSRYLEDESYYK---ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN-----DV 217 (270)
T ss_pred eEEccCceeeeccccccee---cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH-----HH
Confidence 9999999997654432111 112234568999999988889999999999999999986 99998633111 00
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
... +. .......+..++.++.+++.+|+..+|++|||+.++++.|+++..+
T Consensus 218 ~~~-----~~----------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 218 IGR-----IE----------------------NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHH-----HH----------------------cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 000 00 0001112335678899999999999999999999999999998764
No 184
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9e-36 Score=330.06 Aligned_cols=242 Identities=25% Similarity=0.304 Sum_probs=188.8
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHH-HHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECK-ALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++. .++..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~-----~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQ-----TADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEE-----cCCeEEEEE
Confidence 46999999999999999899999999986432 122234444444 567789999999998853 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG 141 (325)
T cd05602 76 DYINGGELFYHLQRER-----------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFG 141 (325)
T ss_pred eCCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCC
Confidence 9999999999986543 577888899999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........
T Consensus 142 ~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~--- 209 (325)
T cd05602 142 LCKENIEHNG----TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNIL--- 209 (325)
T ss_pred CCcccccCCC----CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHHHH---
Confidence 9975322111 12234689999999999999999999999999999999999999863211 11100000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. .........+..+.+++.+|++.||.+||++.+.+.
T Consensus 210 -----~--------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 210 -----N--------------------KPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred -----h--------------------CCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 0 001112356778999999999999999999885443
No 185
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2e-35 Score=321.30 Aligned_cols=274 Identities=23% Similarity=0.375 Sum_probs=205.0
Q ss_pred CCCCCCceeccccceeEEEEEE----CCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAF----DQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.-|++.+.||+|+||.||+|.+ ..+++.||+|.++... ....+.+.+|++++++++|||++++++++... ++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 3478899999999999999985 3467899999987443 33446789999999999999999999986532 23
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||+++++|.+++.... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~----------~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 147 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNK----------NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQ 147 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCC
Confidence 56899999999999999986543 2578999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
+||+|||+++........ ........++..|+|||++.+..++.++|||||||++|||+|++.|+....... ....
T Consensus 148 ~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~---~~~~ 223 (284)
T cd05079 148 VKIGDFGLTKAIETDKEY-YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF---LKMI 223 (284)
T ss_pred EEECCCccccccccCccc-eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh---hhhc
Confidence 999999999865433221 111123446778999999988889999999999999999999887643211100 0000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHh-hhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLR-QAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
.+...... .. ....... ......+..++.++.+++.+||+.+|++|||++|+++.++++
T Consensus 224 ------------~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 224 ------------GPTHGQMT--VT-RLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ------------cccccccc--HH-HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00000000 00 0000000 001112335778899999999999999999999999999876
No 186
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=3e-35 Score=316.82 Aligned_cols=259 Identities=24% Similarity=0.461 Sum_probs=203.5
Q ss_pred hCCCCCCceeccccceeEEEEEECCCC---eEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDG---TIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.++|++.+.||+|+||.||+|++..++ ..||+|.++... ....+.+.+|+.++++++||||+++++++. .+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KS 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 357889999999999999999885443 379999886432 233467899999999999999999999854 44
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..++||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~ 144 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKHD----------GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLV 144 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCe
Confidence 78899999999999999997543 2578999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
++|+|||++.......... .......++..|+|||++.+..++.++||||||+++||+++ |..||...... ..
T Consensus 145 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~-----~~ 218 (267)
T cd05066 145 CKVSDFGLSRVLEDDPEAA-YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ-----DV 218 (267)
T ss_pred EEeCCCCccccccccccee-eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH-----HH
Confidence 9999999998654332111 11112234568999999998899999999999999999887 99997632110 00
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
. ..+.+ . ........++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 219 ~-----~~~~~---~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 219 I-----KAIEE---G-------------------YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred H-----HHHhC---C-------------------CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0 00000 0 00011235677899999999999999999999999999875
No 187
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.8e-35 Score=317.52 Aligned_cols=259 Identities=24% Similarity=0.470 Sum_probs=203.1
Q ss_pred CCCCCCceeccccceeEEEEEECCCCe---EEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGT---IVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~---~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
.+|++.+.||+|+||.||+|++..+++ .||+|+++.. ......++..|+.++++++||||+++++++. .+.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEEC-----CCC
Confidence 357889999999999999999876654 6999998644 2334568999999999999999999999853 457
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+++++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~ 145 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND----------GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVC 145 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcE
Confidence 7899999999999999987543 2578999999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccc-eeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQ-SCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
||+|||.+........... ....+...+..|+|||++.+..++.++|||||||++||+++ |..||..... ...
T Consensus 146 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~-----~~~ 220 (269)
T cd05065 146 KVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-----QDV 220 (269)
T ss_pred EECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH-----HHH
Confidence 9999999876543221111 11111112457999999999999999999999999999987 9999853211 000
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
... +... .....+.+++..+.+++.+||+.+|++||++++++..|+++
T Consensus 221 ~~~-----i~~~----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 221 INA-----IEQD----------------------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred HHH-----HHcC----------------------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 0000 00111235677899999999999999999999999998764
No 188
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.7e-35 Score=323.72 Aligned_cols=273 Identities=21% Similarity=0.351 Sum_probs=203.7
Q ss_pred hCCCCCCceeccccceeEEEEEECC----------------CCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQ----------------DGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVK 724 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 724 (988)
.++|++.+.||+|+||.||+|.+.. ++..||+|+++... .....++.+|+.++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 3579999999999999999986532 34579999987443 233467899999999999999999
Q ss_pred EEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecc
Q 001974 725 VITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCD 804 (988)
Q Consensus 725 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 804 (988)
+++++. .++..++||||+++++|.+++................+++.++..++.|++.|++|||+. +++|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~d 155 (296)
T cd05095 84 LLAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRD 155 (296)
T ss_pred EEEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Ceeccc
Confidence 999854 346789999999999999999765432221122224588899999999999999999998 999999
Q ss_pred CCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh--CCCC
Q 001974 805 LKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT--GKKP 882 (988)
Q Consensus 805 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt--g~~p 882 (988)
|||+||++++++.++|+|||+++......... ......++..|+|||...++.++.++|||||||++|||++ |..|
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p 233 (296)
T cd05095 156 LATRNCLVGKNYTIKIADFGMSRNLYSGDYYR--IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQP 233 (296)
T ss_pred CChheEEEcCCCCEEeccCcccccccCCccee--ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999997553322111 1112234678999999888889999999999999999998 6778
Q ss_pred CCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH
Q 001974 883 TDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT 962 (988)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 962 (988)
|...... ..... ......... .......+..++..+.+++.+||+.||++||++.
T Consensus 234 ~~~~~~~-----~~~~~-----~~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ 288 (296)
T cd05095 234 YSQLSDE-----QVIEN-----TGEFFRDQG---------------RQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQ 288 (296)
T ss_pred ccccChH-----HHHHH-----HHHHHhhcc---------------ccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 7532111 11100 000000000 0000112235678899999999999999999999
Q ss_pred HHHHHHH
Q 001974 963 NVVHELQ 969 (988)
Q Consensus 963 evl~~L~ 969 (988)
||++.|+
T Consensus 289 ~i~~~l~ 295 (296)
T cd05095 289 EIHATLL 295 (296)
T ss_pred HHHHHHh
Confidence 9999886
No 189
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.1e-35 Score=334.09 Aligned_cols=261 Identities=20% Similarity=0.266 Sum_probs=200.5
Q ss_pred HHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccc
Q 001974 656 ESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSI 732 (988)
Q Consensus 656 ~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 732 (988)
.++....++|++.+.||+|+||.||+|+++.+++.||+|++.... ....+.+.+|+.+++.++||||+++++++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~--- 112 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF--- 112 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE---
Confidence 344556689999999999999999999999999999999986322 22335678899999999999999999885
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
..++..++||||+++|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||++
T Consensus 113 --~~~~~~~lv~Ey~~gg~L~~~~~~~------------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll 175 (371)
T cd05622 113 --QDDRYLYMVMEYMPGGDLVNLMSNY------------DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLL 175 (371)
T ss_pred --EcCCEEEEEEcCCCCCcHHHHHHhc------------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEE
Confidence 3457899999999999999998643 467888899999999999999998 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCCC----CCCCccchHHHHHHHHHHHhCCCCCCcccc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS----EVSTNGDIYSYGILLLEMVTGKKPTDVMFE 888 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~vl~elltg~~p~~~~~~ 888 (988)
+.++.+||+|||+++........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 176 ~~~~~ikL~DfG~a~~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~-- 250 (371)
T cd05622 176 DKSGHLKLADFGTCMKMNKEGMV---RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD-- 250 (371)
T ss_pred CCCCCEEEEeCCceeEcCcCCcc---cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCC--
Confidence 99999999999999865432211 11234699999999998754 3788999999999999999999998631
Q ss_pred CCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCC--CCCHHHHHH
Q 001974 889 GDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQD--RMSITNVVH 966 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~ 966 (988)
........ +...... ........++..+.+++.+|+..+|.+ ||+++|+++
T Consensus 251 ---~~~~~~~~-----i~~~~~~-------------------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 251 ---SLVGTYSK-----IMNHKNS-------------------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred ---CHHHHHHH-----HHcCCCc-------------------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 11111100 0000000 000111246677899999999844433 789999887
Q ss_pred HH
Q 001974 967 EL 968 (988)
Q Consensus 967 ~L 968 (988)
..
T Consensus 304 h~ 305 (371)
T cd05622 304 HL 305 (371)
T ss_pred Cc
Confidence 53
No 190
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.7e-35 Score=319.44 Aligned_cols=265 Identities=26% Similarity=0.434 Sum_probs=204.2
Q ss_pred CCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.+|...++||+|+||.||+|... .++..||+|.++.........+.+|+++++.++|+||+++++++. .+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT-----EG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----cC
Confidence 46788899999999999999752 356789999987655555678999999999999999999999854 34
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCch----hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKD----VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD 813 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 813 (988)
+..++||||+++++|.+++......... .......+++..+..++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 6789999999999999999754321100 000113588999999999999999999998 999999999999999
Q ss_pred CCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcc
Q 001974 814 NDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLN 892 (988)
Q Consensus 814 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~ 892 (988)
+++.+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |++||......
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--- 231 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDY--YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--- 231 (280)
T ss_pred CCCCEEECCCCceeEcCCCce--eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH---
Confidence 999999999999975433211 111122335788999999999999999999999999999998 99997532111
Q ss_pred hHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
..... + .. ......+..+++.+.+++.+||+.||++||+++||++.|+
T Consensus 232 --~~~~~-----~---~~-------------------~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 232 --EAIEC-----I---TQ-------------------GRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred --HHHHH-----H---Hc-------------------CccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 00000 0 00 0001122356788999999999999999999999999886
No 191
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3e-35 Score=323.41 Aligned_cols=276 Identities=21% Similarity=0.249 Sum_probs=203.4
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|++.+.||+|+||.||+|.+..++..||+|.++... ......+.+|++++++++||||+++++++. .++..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence 46899999999999999999999899999999986442 233456889999999999999999999864 457899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++.... .+++..+..++.|+++||+|||+. .+++||||||+||++++++.+||+
T Consensus 76 lv~ey~~~~~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~ 142 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG-----------RIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLC 142 (308)
T ss_pred EEeeccCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEc
Confidence 9999999999999996542 578889999999999999999973 289999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++....... .....++..|+|||.+.+..++.++|||||||++|||++|+.||...... ......
T Consensus 143 dfg~~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~--~~~~~~---- 210 (308)
T cd06615 143 DFGVSGQLIDSM------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK--ELEAMF---- 210 (308)
T ss_pred cCCCcccccccc------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh--hHHHhh----
Confidence 999987543221 12345889999999998888999999999999999999999998632111 111100
Q ss_pred hhhhhhhhcc------ccc-cC-cc--hhhhhhHHHHhhhhhccc-cchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 902 LDHVIDIVDP------ILI-ND-VE--DWDATNKQRLRQAKINGK-IECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 902 ~~~~~~~~d~------~l~-~~-~~--~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
........++ ... .+ .. .+...............+ ..++.++.+++.+||+.||++|||++|+++.-
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 211 GRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred cCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0000000000 000 00 00 000000000000111111 12567899999999999999999999998874
No 192
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9.6e-36 Score=329.85 Aligned_cols=242 Identities=26% Similarity=0.318 Sum_probs=188.9
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHH-HHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECK-ALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||+||+|++..+|+.||+|++.... ......+..|.. +++.++||||+++++++. .++..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~-----~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQ-----TTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEe-----cCCEEEEEE
Confidence 46899999999999999899999999986432 223344555555 467789999999998853 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|..++.... .+++.++..++.||+.||+|||+. +|+||||||+||++++++.+||+|||
T Consensus 76 e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG 141 (325)
T cd05604 76 DFVNGGELFFHLQRER-----------SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFG 141 (325)
T ss_pred cCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecC
Confidence 9999999998886542 688999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... +..........
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~-----~~~~~~~~~~~-- 210 (325)
T cd05604 142 LCKEGIAQSD----TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR-----DVAEMYDNILH-- 210 (325)
T ss_pred CcccCCCCCC----CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC-----CHHHHHHHHHc--
Confidence 9874322111 112345899999999999999999999999999999999999998632 11111111000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. ........+.++.+++.+|++.+|++||++++.++
T Consensus 211 ------~--------------------~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~ 246 (325)
T cd05604 211 ------K--------------------PLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFL 246 (325)
T ss_pred ------C--------------------CccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHH
Confidence 0 00112245667889999999999999999864433
No 193
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.9e-35 Score=318.40 Aligned_cols=270 Identities=22% Similarity=0.382 Sum_probs=209.9
Q ss_pred hhCCCCCCceeccccceeEEEEEECC----CCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQ----DGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
..++|++.+.||+|+||.||+|.+.. .+..|++|+++... ....+.+.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---- 79 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE---- 79 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 45789999999999999999999864 26789999886432 2335678899999999999999999998643
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.+...++++||+++++|.+++......... ....+++.+++.++.|++.||+|||+. +++||||||+||+++++
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~ 153 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEAN---NPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEE 153 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccc---cccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCC
Confidence 346789999999999999998654321100 113689999999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~ 894 (988)
+.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++||+++ |+.||..... .
T Consensus 154 ~~~kl~d~g~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~ 226 (280)
T cd05043 154 LQVKITDNALSRDLFPMDYH--CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-----F 226 (280)
T ss_pred CcEEECCCCCcccccCCceE--EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-----H
Confidence 99999999999855332211 11112346778999999998889999999999999999999 9999863211 0
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
.+.. .+.. . ........+++++.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 227 ~~~~-----~~~~----~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 227 EMAA-----YLKD----G------------------YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHH-----HHHc----C------------------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 1100 0000 0 00011234677899999999999999999999999999998764
No 194
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.5e-35 Score=318.55 Aligned_cols=259 Identities=24% Similarity=0.308 Sum_probs=202.0
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeeccccccc-CC
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQ-GN 737 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~-~~ 737 (988)
.+.+.|++.+.||+|+||.||+|....+++.||+|++.... .....+..|+.+++++ +|+||+++++++...... ..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35677999999999999999999999899999999987543 3346788999999998 799999999997653221 13
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~---------~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~ 149 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG---------NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 149 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCC
Confidence 568999999999999999875331 3588999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLN 892 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 892 (988)
++|+|||++........ ......|+..|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 150 ~~l~Dfg~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~--- 222 (272)
T cd06637 150 VKLVDFGVSAQLDRTVG----RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM--- 222 (272)
T ss_pred EEEccCCCceecccccc----cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH---
Confidence 99999999976533211 122345889999999986 345788999999999999999999998532110
Q ss_pred hHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..... ......+ ......++.++.+++.+||..||.+|||+.|+++
T Consensus 223 -~~~~~------~~~~~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 223 -RALFL------IPRNPAP---------------------RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -HHHHH------HhcCCCC---------------------CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00000 0000000 0011245667899999999999999999999975
No 195
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=322.56 Aligned_cols=252 Identities=24% Similarity=0.304 Sum_probs=206.9
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc---hhHHHHHHHHHHHhcC-CCCceEEEeecccccccC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG---ASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 736 (988)
..+.|++.+.||+|.||.||+++.+.+|+.+|+|++...... ..+.+.+|+.+|+++. ||||+.+++++ ++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~-----e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF-----ED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE-----Ec
Confidence 346788999999999999999999999999999999755443 3468999999999997 99999999994 45
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC-
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND- 815 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~- 815 (988)
....++|||++.||.|.+.+... .+++.++..++.|++.|+.|||+. ||||||+||+|+|+...
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~------------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~ 172 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK------------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKD 172 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc------------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeecccc
Confidence 58999999999999999998643 288999999999999999999998 99999999999999643
Q ss_pred ---CcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 001974 816 ---MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLN 892 (988)
Q Consensus 816 ---~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 892 (988)
+.+|++|||+|....... .....+||+.|+|||++....|+.++||||+||++|.|++|.+||.......
T Consensus 173 ~~~~~ik~~DFGla~~~~~~~-----~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~-- 245 (382)
T KOG0032|consen 173 EGSGRIKLIDFGLAKFIKPGE-----RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE-- 245 (382)
T ss_pred CCCCcEEEeeCCCceEccCCc-----eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH--
Confidence 579999999999776522 2334679999999999999999999999999999999999999986422111
Q ss_pred hHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... .+......-..+.| ..+...+.+++..|+..||.+|+|++++++
T Consensus 246 --~~~---------~i~~~~~~f~~~~w----------------~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 246 --IFL---------AILRGDFDFTSEPW----------------DDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred --HHH---------HHHcCCCCCCCCCc----------------cccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 111 11111111111222 246778899999999999999999999998
No 196
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-35 Score=333.05 Aligned_cols=275 Identities=19% Similarity=0.252 Sum_probs=196.0
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
...+|++.+.||+|+||.||+|++..+++.||+|+... .....|+.++++++||||+++++++.. +...
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~------~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 132 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK------GTTLIEAMLLQNVNHPSVIRMKDTLVS-----GAIT 132 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc------cccHHHHHHHHhCCCCCCcChhheEEe-----CCee
Confidence 34579999999999999999999988899999998532 223569999999999999999998643 4778
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+ .++|.+++.... ..+++.++..|+.||+.||+|||++ +||||||||+||+++.++.+||
T Consensus 133 ~lv~e~~-~~~l~~~l~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl 198 (357)
T PHA03209 133 CMVLPHY-SSDLYTYLTKRS----------RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCI 198 (357)
T ss_pred EEEEEcc-CCcHHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEE
Confidence 9999999 578888886543 3689999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCC-CCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKP-TDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p-~~~~~~~~~~~~~~~~~ 899 (988)
+|||.++....... ..+..||..|+|||++.+..++.++|||||||++|||+++..| |................
T Consensus 199 ~DfG~a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~ 273 (357)
T PHA03209 199 GDLGAAQFPVVAPA-----FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHS 273 (357)
T ss_pred ecCccccccccCcc-----cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHH
Confidence 99999975332211 1234589999999999999999999999999999999995554 33221111111111111
Q ss_pred HHhhhhhhh--hccccccCcchhhhhhHHHHh----------hhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDI--VDPILINDVEDWDATNKQRLR----------QAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.+.+.+... ....+..+... ........ .........++....++|.+||+.||++||||.|+++.
T Consensus 274 ~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 274 HLLKIISTLKVHPEEFPRDPGS--RLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHHHHhccChhhcCCCCcc--HHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 111111000 00000000000 00000000 00000112456677889999999999999999999863
No 197
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4e-35 Score=314.61 Aligned_cols=255 Identities=26% Similarity=0.460 Sum_probs=202.9
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
..++|++.++||+|+||.||+|... +++.||+|.+.... ....++.+|+.++++++|+||+++++++. .+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~ 75 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT------QEPI 75 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCCc
Confidence 3467899999999999999999975 67889999986433 33468899999999999999999998742 2568
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||++++++.++|
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l 143 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEG---------IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKI 143 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEE
Confidence 999999999999999865432 3678899999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||.+........ .......++..|+|||++.+..++.++||||||+++||+++ |+.||...... .....
T Consensus 144 ~dfg~~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-----~~~~~ 215 (260)
T cd05067 144 ADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-----EVIQN 215 (260)
T ss_pred ccCcceeecCCCCc---ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-----HHHHH
Confidence 99999976542211 11122345778999999998889999999999999999999 99998632110 00000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
+.. . .....+...+.++.+++.+||+.+|++||+++++.+.|+.
T Consensus 216 -----~~~----~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 216 -----LER----G------------------YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -----HHc----C------------------CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 000 0 0001122456789999999999999999999999999875
No 198
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5.7e-35 Score=320.03 Aligned_cols=260 Identities=24% Similarity=0.387 Sum_probs=203.1
Q ss_pred hCCCCCCceeccccceeEEEEEE-----CCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAF-----DQDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDF 734 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~-----~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 734 (988)
.++|++.+.||+|+||.||+|.+ ..++..||+|+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI--- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec---
Confidence 35689999999999999999985 2345689999987443 23346789999999999 89999999998643
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 814 (988)
.+..++||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 111 --~~~~~lv~e~~~~~~L~~~i~~~~~---------~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~ 176 (302)
T cd05055 111 --GGPILVITEYCCYGDLLNFLRRKRE---------SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTH 176 (302)
T ss_pred --CCceEEEEEcCCCCcHHHHHHhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcC
Confidence 4678999999999999999965431 1378999999999999999999998 9999999999999999
Q ss_pred CCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcch
Q 001974 815 DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNL 893 (988)
Q Consensus 815 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~ 893 (988)
++.++++|||+++........ .......++..|+|||.+.+..++.++||||+||++|||++ |..||......+
T Consensus 177 ~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~--- 251 (302)
T cd05055 177 GKIVKICDFGLARDIMNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS--- 251 (302)
T ss_pred CCeEEECCCcccccccCCCce--eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH---
Confidence 999999999999865432211 11122346788999999999899999999999999999998 999986321110
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
. . ...++... ....+...+.++.+++.+||+.+|++|||+.|+++.|++.
T Consensus 252 -~-~--------~~~~~~~~------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 252 -K-F--------YKLIKEGY------------------RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -H-H--------HHHHHcCC------------------cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 0 00000000 0011123466799999999999999999999999999874
No 199
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=350.73 Aligned_cols=261 Identities=22% Similarity=0.292 Sum_probs=201.1
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
....++|++.+.||+|+||+||+|.+..+++.||+|++.... ......+..|+.++++++||||+++++++... .
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de---~ 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK---A 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---C
Confidence 344578999999999999999999999999999999986432 23346788999999999999999999986432 3
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCC----CCCeEeccCCCCCeee
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHC----QEPVLHCDLKPGNVLL 812 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~ivH~Dlkp~NIll 812 (988)
...+++||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+.. ..+||||||||+|||+
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~-------~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKM-------FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhc-------cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 46789999999999999998643211 136899999999999999999999852 1259999999999999
Q ss_pred CC-----------------CCcEEEeeecccccccccccccceeccccccccccccCcccCC--CCCCCccchHHHHHHH
Q 001974 813 DN-----------------DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG--SEVSTNGDIYSYGILL 873 (988)
Q Consensus 813 ~~-----------------~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl 873 (988)
+. .+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~-----~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~IL 233 (1021)
T PTZ00266 159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM-----AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCII 233 (1021)
T ss_pred ecCccccccccccccccCCCCceEEccCCcccccccccc-----ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHH
Confidence 64 23589999999986533221 123468999999999864 4588999999999999
Q ss_pred HHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCc
Q 001974 874 LEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVE 953 (988)
Q Consensus 874 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 953 (988)
|||+||+.||... ......... +... + .......+.++.+||..||+.
T Consensus 234 YELLTGk~PF~~~----~~~~qli~~-----lk~~--p---------------------~lpi~~~S~eL~dLI~~~L~~ 281 (1021)
T PTZ00266 234 YELCSGKTPFHKA----NNFSQLISE-----LKRG--P---------------------DLPIKGKSKELNILIKNLLNL 281 (1021)
T ss_pred HHHHHCCCCCCcC----CcHHHHHHH-----HhcC--C---------------------CCCcCCCCHHHHHHHHHHhcC
Confidence 9999999998632 111111110 0000 0 000113467799999999999
Q ss_pred CCCCCCCHHHHHH
Q 001974 954 SPQDRMSITNVVH 966 (988)
Q Consensus 954 dP~~RPs~~evl~ 966 (988)
+|.+||++.|++.
T Consensus 282 dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 282 SAKERPSALQCLG 294 (1021)
T ss_pred ChhHCcCHHHHhc
Confidence 9999999999985
No 200
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.4e-35 Score=319.91 Aligned_cols=251 Identities=23% Similarity=0.302 Sum_probs=204.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
.+|++.+.||.|++|.||+|.+..+++.||+|.+........+.+.+|+.+++.++|||++++++++. .++..++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEEE
Confidence 46999999999999999999998899999999997665555678899999999999999999999854 3478999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
|+||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 94 v~e~~~~~~L~~~~~~~------------~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~d 158 (296)
T cd06655 94 VMEYLAGGSLTDVVTET------------CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTD 158 (296)
T ss_pred EEEecCCCcHHHHHHhc------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcc
Confidence 99999999999988532 578999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
||++......... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...... .... . ..
T Consensus 159 fg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~----~~~~-~-~~ 228 (296)
T cd06655 159 FGFCAQITPEQSK----RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL----RALY-L-IA 228 (296)
T ss_pred Cccchhccccccc----CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHH-H-HH
Confidence 9998765432211 12235788999999999888999999999999999999999998642111 0000 0 00
Q ss_pred hhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 903 DHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 903 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. .......+..+++.+.+++.+||..||++||++.++++.
T Consensus 229 ~~------------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 229 TN------------------------GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred hc------------------------CCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00 000011223567789999999999999999999999854
No 201
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1e-35 Score=334.42 Aligned_cols=204 Identities=27% Similarity=0.356 Sum_probs=173.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|+..+.||+|+||.||+|+...+++.||+|+++... ......+..|+.++..++||+|+++++++ .+++.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 46889999999999999999999899999999996432 23345788899999999999999999984 45588
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~-----------~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vk 141 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKD-----------TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVK 141 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEE
Confidence 999999999999999986543 588999999999999999999998 999999999999999999999
Q ss_pred Eeeecccccccccccc-------------------------------cceeccccccccccccCcccCCCCCCCccchHH
Q 001974 820 VGDFGLARVRQEVSNL-------------------------------TQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYS 868 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~-------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvws 868 (988)
|+|||++......... .........||+.|+|||++.+..++.++||||
T Consensus 142 L~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwS 221 (360)
T cd05627 142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWS 221 (360)
T ss_pred EeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecc
Confidence 9999998754321100 000012346999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCc
Q 001974 869 YGILLLEMVTGKKPTDV 885 (988)
Q Consensus 869 lG~vl~elltg~~p~~~ 885 (988)
|||++|||++|+.||..
T Consensus 222 lGvilyel~tG~~Pf~~ 238 (360)
T cd05627 222 LGVIMYEMLIGYPPFCS 238 (360)
T ss_pred ccceeeecccCCCCCCC
Confidence 99999999999999863
No 202
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6e-35 Score=322.08 Aligned_cols=277 Identities=22% Similarity=0.422 Sum_probs=209.4
Q ss_pred hhCCCCCCceeccccceeEEEEEEC-------CCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeeccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFD-------QDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSS 731 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 731 (988)
..++|.+.+.||+|+||.||+|+.. .....||+|.++... ......+.+|+.+++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3467889999999999999999863 234579999987432 23345788999999999 69999999998643
Q ss_pred ccccCCCceEEEEeeccccchhhhcCCCCCCCch-----hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCC
Q 001974 732 IDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKD-----VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLK 806 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 806 (988)
++..++||||+++|+|.+++......... .......+++.++..++.|++.||+|||++ +++|||||
T Consensus 90 -----~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlk 161 (314)
T cd05099 90 -----EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLA 161 (314)
T ss_pred -----CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 46789999999999999999764321100 001123689999999999999999999998 99999999
Q ss_pred CCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCc
Q 001974 807 PGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDV 885 (988)
Q Consensus 807 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~ 885 (988)
|+||++++++.+||+|||.++.......... .....++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 162 ARNVLVTEDNVMKIADFGLARGVHDIDYYKK--TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred ceeEEEcCCCcEEEccccccccccccccccc--cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999986543221111 111124567999999998899999999999999999999 8888753
Q ss_pred cccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 886 MFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
.. ....... +.. ......+..++.++.+++.+||+.+|++|||+.|++
T Consensus 240 ~~-----~~~~~~~-----~~~----------------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll 287 (314)
T cd05099 240 IP-----VEELFKL-----LRE----------------------GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLV 287 (314)
T ss_pred CC-----HHHHHHH-----HHc----------------------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 21 1011000 000 000112235677899999999999999999999999
Q ss_pred HHHHHHHHHhhhhc
Q 001974 966 HELQSVKNALLEAW 979 (988)
Q Consensus 966 ~~L~~i~~~~~~~~ 979 (988)
+.|+++.....+.+
T Consensus 288 ~~l~~~~~~~~~~~ 301 (314)
T cd05099 288 EALDKVLAAVSEEY 301 (314)
T ss_pred HHHHHHHHHhcCCc
Confidence 99999987655543
No 203
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6e-35 Score=320.81 Aligned_cols=272 Identities=20% Similarity=0.405 Sum_probs=207.7
Q ss_pred hhCCCCCCceeccccceeEEEEEEC-------CCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeeccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFD-------QDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSS 731 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~-------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 731 (988)
..++|++.+.||+|+||.||+|++. .++..||+|.++... ....+.+.+|+.+++.+ +||||+++++++.
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~- 91 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT- 91 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe-
Confidence 4567889999999999999999752 234579999986432 23346788999999999 8999999999864
Q ss_pred ccccCCCceEEEEeeccccchhhhcCCCCCCCchh-----hhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCC
Q 001974 732 IDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDV-----EIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLK 806 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~-----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 806 (988)
.....++||||+++|+|.+++.......... ......+++.++..++.||+.||+|||+. +++|||||
T Consensus 92 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlk 164 (304)
T cd05101 92 ----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLA 164 (304)
T ss_pred ----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeecccc
Confidence 3477899999999999999997643211100 01123688999999999999999999998 99999999
Q ss_pred CCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCc
Q 001974 807 PGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDV 885 (988)
Q Consensus 807 p~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~ 885 (988)
|+||++++++.+||+|||.++......... ......++..|+|||++.+..++.++||||||+++||+++ |..||..
T Consensus 165 p~Nili~~~~~~kl~D~g~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 242 (304)
T cd05101 165 ARNVLVTENNVMKIADFGLARDVNNIDYYK--KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 242 (304)
T ss_pred cceEEEcCCCcEEECCCccceecccccccc--cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 999999999999999999998654322111 1112335678999999998889999999999999999998 7888752
Q ss_pred cccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 886 MFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
. ......... ... .....+..++..+.+++.+||+.+|++|||+.|++
T Consensus 243 ~-----~~~~~~~~~-~~~--------------------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l 290 (304)
T cd05101 243 I-----PVEELFKLL-KEG--------------------------HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLV 290 (304)
T ss_pred C-----CHHHHHHHH-HcC--------------------------CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHH
Confidence 2 111111100 000 00011235677899999999999999999999999
Q ss_pred HHHHHHHHH
Q 001974 966 HELQSVKNA 974 (988)
Q Consensus 966 ~~L~~i~~~ 974 (988)
+.|+++.+-
T Consensus 291 ~~l~~~~~~ 299 (304)
T cd05101 291 EDLDRILTL 299 (304)
T ss_pred HHHHHHHHh
Confidence 999998653
No 204
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.6e-35 Score=327.59 Aligned_cols=238 Identities=26% Similarity=0.333 Sum_probs=186.4
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHH-HHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECK-ALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|++..+++.||+|++.... ......+..|.. +++.++||||+++++++. +.+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~-----~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQ-----TAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCEEEEEE
Confidence 47999999999999999899999999986432 122344555554 577889999999998853 457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|..++.... .+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 141 (321)
T cd05603 76 DYVNGGELFFHLQRER-----------CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFG 141 (321)
T ss_pred cCCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCC
Confidence 9999999998886432 578888999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||... +.......
T Consensus 142 ~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~----- 207 (321)
T cd05603 142 LCKEGVEPEE----TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DVSQMYDN----- 207 (321)
T ss_pred CCccCCCCCC----ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC-----CHHHHHHH-----
Confidence 9875322111 122345899999999999989999999999999999999999998632 11111100
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT 962 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 962 (988)
+ .. .....+...+.++.+++.+|++.||++||++.
T Consensus 208 i---~~--------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 208 I---LH--------------------KPLQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred H---hc--------------------CCCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 0 00 00111224566789999999999999999865
No 205
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-35 Score=318.20 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=200.1
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
++|++.+.||+|+||.||+|++..+++.||+|+++.........+.+|+.+++.++||||+++++++. .++..++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEEE
Confidence 46888899999999999999998899999999997665555567889999999999999999999854 4478899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++.... .+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|
T Consensus 84 v~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~d 149 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTG-----------PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLAD 149 (267)
T ss_pred EEeccCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECc
Confidence 999999999999986543 588999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
||.+........ ......|+..|+|||++. ...++.++||||+||++|||++|+.||....... ... .
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~----~~~-~ 220 (267)
T cd06645 150 FGVSAQITATIA----KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----ALF-L 220 (267)
T ss_pred ceeeeEccCccc----ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh----hHH-h
Confidence 999875432211 112345899999999874 4568899999999999999999999975321110 000 0
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. ......+ ........++..+.+++.+||+.+|++||+++++++
T Consensus 221 ~----~~~~~~~-------------------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 221 M----TKSNFQP-------------------PKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred h----hccCCCC-------------------CcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 0 0000000 000111235567899999999999999999999875
No 206
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.9e-35 Score=320.55 Aligned_cols=269 Identities=20% Similarity=0.260 Sum_probs=207.4
Q ss_pred CHHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeecccc
Q 001974 654 SYESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSI 732 (988)
Q Consensus 654 ~~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 732 (988)
.++.+..+.++|++.+.||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++++ +||||+++++++...
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 34556667899999999999999999999999899999999876432 2346688899999999 799999999987654
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
....++..++||||+++++|.+++...... ...+++..+..++.|++.||.|||+. +++||||||+||++
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili 157 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKR-------GERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILL 157 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhcc-------CccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEE
Confidence 345567899999999999999987532111 13578889999999999999999998 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCC-----CCCCCccchHHHHHHHHHHHhCCCCCCccc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-----SEVSTNGDIYSYGILLLEMVTGKKPTDVMF 887 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~ 887 (988)
++++.+||+|||+++....... ......|+..|+|||++.. ..++.++||||+||++|||++|+.||....
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 158 TTEGGVKLVDFGVSAQLTSTRL----RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred CCCCCEEEccCCceeecccCCC----ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 9999999999999976543211 1122458999999998753 457889999999999999999999986321
Q ss_pred cCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 888 EGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. ..... ......+ ....+..++.++.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~----~~~~~------~~~~~~~--------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 234 PM----RALFK------IPRNPPP--------------------TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred hh----HHHhh------ccccCCC--------------------cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 10 00000 0000000 000111245678999999999999999999999875
No 207
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.4e-35 Score=319.39 Aligned_cols=265 Identities=21% Similarity=0.327 Sum_probs=201.9
Q ss_pred CCCCCceeccccceeEEEEEECC-----CCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQ-----DGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
+|++.+.||+|+||.||+|.+.. .++.||+|+++.... ...+.+.+|+.+++.++||||+++++++.. .
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~ 80 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK-----E 80 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-----C
Confidence 47778999999999999998743 357899999874433 234568899999999999999999999643 4
Q ss_pred CceEEEEeeccccchhhhcCCCCCCC-----chhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQ-----KDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
...++++||+++++|.+++....... .........+++..+..++.|++.||+|||++ +|+||||||+||++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~ 157 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLV 157 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEe
Confidence 67899999999999999985332100 00011123588899999999999999999998 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDL 891 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~ 891 (988)
++++.+||+|||+++........ .......+++.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--- 232 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAADYY--KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--- 232 (283)
T ss_pred cCCCceEecccccccccccchhe--eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 99999999999998765332211 11122346789999999988889999999999999999998 8888753211
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
...... +. +.. ....+..++..+.+++.+||+.+|++||++++|++.|+.
T Consensus 233 --~~~~~~-----i~---~~~-------------------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 --QDVIEM-----IR---NRQ-------------------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred --HHHHHH-----HH---cCC-------------------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111110 00 000 001123578889999999999999999999999998863
No 208
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.9e-35 Score=321.82 Aligned_cols=271 Identities=22% Similarity=0.409 Sum_probs=206.6
Q ss_pred hCCCCCCceeccccceeEEEEEECC-------CCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQ-------DGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSI 732 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 732 (988)
.++|.+.+.||+|+||.||+|++.. ++..||+|.++... ......+..|+.+++++ +||||+++++++..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 4679999999999999999998742 23579999987542 23345788899999999 89999999999643
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCCc-----hhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCC
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQK-----DVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKP 807 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~-----~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 807 (988)
.+..++||||+++|+|.+++........ ........+++.+++.++.|++.||+|||+. +++||||||
T Consensus 96 ----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 96 ----DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred ----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 4678999999999999999976432110 0001123589999999999999999999998 999999999
Q ss_pred CCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCcc
Q 001974 808 GNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVM 886 (988)
Q Consensus 808 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~ 886 (988)
+||+++.++.+||+|||.++.......... .....++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDYYKK--TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccchhhc--cccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 999999999999999999875543211111 111224568999999998889999999999999999998 88887521
Q ss_pred ccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 887 FEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
........ +.. ......+..++.++.+++.+||+.+|++|||+.|+++
T Consensus 247 -----~~~~~~~~---------~~~------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 247 -----PVEELFKL---------LKE------------------GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred -----CHHHHHHH---------HHc------------------CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 11111110 000 0001122356778999999999999999999999999
Q ss_pred HHHHHHHH
Q 001974 967 ELQSVKNA 974 (988)
Q Consensus 967 ~L~~i~~~ 974 (988)
.|+++.+.
T Consensus 295 ~l~~~~~~ 302 (307)
T cd05098 295 DLDRILAL 302 (307)
T ss_pred HHHHHHHH
Confidence 99998764
No 209
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.2e-35 Score=342.85 Aligned_cols=202 Identities=22% Similarity=0.339 Sum_probs=166.1
Q ss_pred HHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCC------CCceEEEeecc
Q 001974 657 SLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRH------RNLVKVITSCS 730 (988)
Q Consensus 657 ~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~ 730 (988)
++....++|++.++||+|+||+||+|.+..+++.||||+++... .....+..|+.+++.++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445688999999999999999999998899999999986432 233456678888777754 45888888764
Q ss_pred cccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEeccCCCCC
Q 001974 731 SIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHH-HCQEPVLHCDLKPGN 809 (988)
Q Consensus 731 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~N 809 (988)
. ...+.++|||++ +++|.+++.... .+++.++..|+.||+.||+|||+ . +||||||||+|
T Consensus 202 ~----~~~~~~iv~~~~-g~~l~~~l~~~~-----------~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~N 262 (467)
T PTZ00284 202 N----ETGHMCIVMPKY-GPCLLDWIMKHG-----------PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPEN 262 (467)
T ss_pred c----CCceEEEEEecc-CCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHH
Confidence 3 236789999998 888988886442 68899999999999999999997 5 99999999999
Q ss_pred eeeCCCC----------------cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHH
Q 001974 810 VLLDNDM----------------IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILL 873 (988)
Q Consensus 810 Ill~~~~----------------~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl 873 (988)
||++.++ .+||+|||.+...... .....||+.|+|||++.+..++.++|||||||++
T Consensus 263 ILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~-------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 335 (467)
T PTZ00284 263 ILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHS-------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCII 335 (467)
T ss_pred EEEecCCcccccccccccCCCCceEEECCCCccccCccc-------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHH
Confidence 9998765 4999999988643221 1235689999999999999999999999999999
Q ss_pred HHHHhCCCCCCc
Q 001974 874 LEMVTGKKPTDV 885 (988)
Q Consensus 874 ~elltg~~p~~~ 885 (988)
|||++|+.||+.
T Consensus 336 ~elltG~~pf~~ 347 (467)
T PTZ00284 336 YELYTGKLLYDT 347 (467)
T ss_pred HHHHhCCCCCCC
Confidence 999999999964
No 210
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.9e-35 Score=319.51 Aligned_cols=269 Identities=23% Similarity=0.370 Sum_probs=202.8
Q ss_pred HhhCCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeeccccc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSID 733 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 733 (988)
...++|++.+.||+|+||.||+|..+ ..+..||+|.++.... .....+.+|+.+++.++||||+++++++.
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--- 79 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--- 79 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc---
Confidence 35678999999999999999999764 2355899998763322 23346788999999999999999999854
Q ss_pred ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC
Q 001974 734 FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD 813 (988)
Q Consensus 734 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 813 (988)
.++..++||||+++|+|.+++........ ........++..+..++.|++.||+|||++ +|+||||||+||+++
T Consensus 80 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~ 153 (288)
T cd05061 80 --KGQPTLVVMELMAHGDLKSYLRSLRPEAE-NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVA 153 (288)
T ss_pred --CCCCcEEEEeCCCCCCHHHHHHHhccccc-cCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEc
Confidence 34678999999999999999965321100 000112457788899999999999999998 999999999999999
Q ss_pred CCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcc
Q 001974 814 NDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLN 892 (988)
Q Consensus 814 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~ 892 (988)
+++.++|+|||+++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---- 227 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDYYRK--GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---- 227 (288)
T ss_pred CCCcEEECcCCccccccccccccc--cCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH----
Confidence 999999999999985433221111 111235678999999998899999999999999999999 7888753211
Q ss_pred hHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
...... ..+. .....+..++..+.+++.+||+.||++|||+.|+++.+++.
T Consensus 228 -~~~~~~--------~~~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 228 -EQVLKF--------VMDG-------------------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -HHHHHH--------HHcC-------------------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 010000 0000 00111234567899999999999999999999999888775
No 211
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.5e-35 Score=317.55 Aligned_cols=251 Identities=22% Similarity=0.325 Sum_probs=199.0
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
|++.+.||+|+||.||+|++..++..+++|.+........+.+.+|+++++.++|||++++++++.. ++..++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-----ENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-----CCEEEEEE
Confidence 6778899999999999999998899999999876555556788999999999999999999998643 47889999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|..++.... .++++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 82 e~~~~~~l~~~~~~~~----------~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg 148 (282)
T cd06643 82 EFCAGGAVDAVMLELE----------RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFG 148 (282)
T ss_pred EecCCCcHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccc
Confidence 9999999998876432 3689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
++........ ......++..|+|||++. +..++.++|||||||++|||++|++||...... .....
T Consensus 149 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~~ 219 (282)
T cd06643 149 VSAKNTRTIQ----RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM-----RVLLK 219 (282)
T ss_pred cccccccccc----ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH-----HHHHH
Confidence 9875432211 112345889999999974 345788999999999999999999998632110 00000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
. .....+ ....+..++.++.+++.+||+.||.+||+++++++.
T Consensus 220 ~-----~~~~~~--------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 220 I-----AKSEPP--------------------TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred H-----hhcCCC--------------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000000 001122456779999999999999999999998754
No 212
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7.1e-35 Score=319.76 Aligned_cols=261 Identities=25% Similarity=0.422 Sum_probs=203.7
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCe----EEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGT----IVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
.++|+..+.||+|+||.||+|++..+++ .||+|.+..... .....+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 4568889999999999999999876665 578888764332 223468899999999999999999998743
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
...++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~----------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~ 146 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHK----------DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPN 146 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCC
Confidence 34579999999999999987543 2578889999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 895 (988)
.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++||+++ |+.||...... .
T Consensus 147 ~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~-----~ 219 (303)
T cd05110 147 HVKITDFGLARLLEGDEKE--YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR-----E 219 (303)
T ss_pred ceEEccccccccccCcccc--cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----H
Confidence 9999999999865432211 11122345778999999998899999999999999999998 89998632110 0
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHHh
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNAL 975 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 975 (988)
. . +.+... .....+..++..+.+++.+||..+|++||+++++++.++++.+..
T Consensus 220 ~-~--------~~~~~~------------------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 220 I-P--------DLLEKG------------------ERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred H-H--------HHHHCC------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 0 0 000000 000112235667899999999999999999999999999986553
No 213
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.6e-35 Score=319.60 Aligned_cols=274 Identities=24% Similarity=0.411 Sum_probs=208.2
Q ss_pred CCCCCCceeccccceeEEEEEECC----CCeEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQ----DGTIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
+.|+..+.||+|+||.||+|++.. +++.||+|+++..... ..+.+.+|+++++.++||||+++++++... .+
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKP---GG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecC---CC
Confidence 457788999999999999999743 4789999999755443 457899999999999999999999986532 34
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~----------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~ 147 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR----------DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDL 147 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc----------cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCC
Confidence 67899999999999999997543 2589999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
++|+|||.+......... ........++..|+|||...+..++.++||||||+++|||++|+.|+..............
T Consensus 148 ~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 226 (284)
T cd05038 148 VKISDFGLAKVLPEDKDY-YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA 226 (284)
T ss_pred EEEcccccccccccCCcc-eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccc
Confidence 999999999876532221 1111122356679999999888999999999999999999999999754221110000000
Q ss_pred HH-HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 898 RT-ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 898 ~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
.. .....+.+.+. .......+..++.++.+++.+||+.+|++|||+.||+++|+++
T Consensus 227 ~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 227 QGQMIVTRLLELLK------------------EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cccccHHHHHHHHH------------------cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00 00000000000 0001112335678899999999999999999999999999886
No 214
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.1e-35 Score=313.01 Aligned_cols=240 Identities=20% Similarity=0.328 Sum_probs=186.7
Q ss_pred ceeccccceeEEEEEECCC------------CeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 669 HLIGMGSFGSVYKGAFDQD------------GTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
+.||+|+||.||+|..... ...||+|++..........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 4689999999999986322 23589998876555555678899999999999999999999653
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
+...++||||+++++|..++.... ..+++..++.++.||++||+|||+. +|+||||||+||+++.++
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~ 142 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKS----------DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREG 142 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCC
Confidence 367799999999999999886543 2588999999999999999999998 999999999999998766
Q ss_pred c-------EEEeeecccccccccccccceeccccccccccccCcccC-CCCCCCccchHHHHHHHHHHH-hCCCCCCccc
Q 001974 817 I-------AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-GSEVSTNGDIYSYGILLLEMV-TGKKPTDVMF 887 (988)
Q Consensus 817 ~-------~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~ell-tg~~p~~~~~ 887 (988)
. ++++|||.+...... ....++..|+|||++. +..++.++|||||||++|||+ +|..||....
T Consensus 143 ~~~~~~~~~~l~d~g~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~ 214 (262)
T cd05077 143 IDGECGPFIKLSDPGIPITVLSR--------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT 214 (262)
T ss_pred ccCCCCceeEeCCCCCCccccCc--------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc
Confidence 4 899999998654321 1234788999999887 467899999999999999998 5888865321
Q ss_pred cCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 888 EGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. ... ..... ........+.++.+++.+||+.||++||++.+|++.
T Consensus 215 ~~-----~~~---------~~~~~--------------------~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 215 LA-----EKE---------RFYEG--------------------QCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred hh-----HHH---------HHHhc--------------------CccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 00 000 00000 000111234578999999999999999999999987
Q ss_pred H
Q 001974 968 L 968 (988)
Q Consensus 968 L 968 (988)
+
T Consensus 261 ~ 261 (262)
T cd05077 261 I 261 (262)
T ss_pred c
Confidence 6
No 215
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7.1e-35 Score=318.29 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=201.0
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.+.|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|+.+++.++||||+++++++. .+...+
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 85 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLW 85 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEE
Confidence 367999999999999999999999889999999997666666678899999999999999999999854 347899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|..++.... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+
T Consensus 86 lv~e~~~~~~l~~~~~~~~----------~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~ 152 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELD----------RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLA 152 (292)
T ss_pred EEEecCCCCcHHHHHHhhc----------CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEc
Confidence 9999999999988875433 2588999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
|||.+........ ......++..|+|||++. ...++.++|||||||++|||++|+.||..... ...
T Consensus 153 dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~ 223 (292)
T cd06644 153 DFGVSAKNVKTLQ----RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRV 223 (292)
T ss_pred cCccceecccccc----ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHH
Confidence 9999875332211 112245788999999975 34578899999999999999999999853211 000
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... ......+ ....+..++.++.+++.+||+.+|++||+++|+++
T Consensus 224 ~~~-----~~~~~~~--------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 224 LLK-----IAKSEPP--------------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHH-----HhcCCCc--------------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 0000000 00112245667899999999999999999999976
No 216
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.8e-35 Score=314.53 Aligned_cols=255 Identities=24% Similarity=0.318 Sum_probs=204.1
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|++.+.||+|+||.||+|.+..+++.+|+|++........+.+.+|++++++++||||+++++++. .++..+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 76 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL-----RRDKLW 76 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEE-----eCCEEE
Confidence 367999999999999999999998889999999998665556678999999999999999999999853 457899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
++|||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+
T Consensus 77 l~~e~~~~~~l~~~~~~~~----------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~ 143 (262)
T cd06613 77 IVMEYCGGGSLQDIYQVTR----------GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLA 143 (262)
T ss_pred EEEeCCCCCcHHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEEC
Confidence 9999999999999986542 2688999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC---CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS---EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|||.+........ ......++..|+|||.+.+. .++.++|||||||++|||++|+.||....... ...
T Consensus 144 d~g~~~~~~~~~~----~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-----~~~ 214 (262)
T cd06613 144 DFGVSAQLTATIA----KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR-----ALF 214 (262)
T ss_pred ccccchhhhhhhh----ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-----HHH
Confidence 9999976543211 11224578899999998876 88999999999999999999999986321110 000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..... . ..+ .........+.++.+++.+||..+|++|||+.+++.
T Consensus 215 ~~~~~---~-~~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 215 LISKS---N-FPP-------------------PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred HHHhc---c-CCC-------------------ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 0 000 000111234567899999999999999999999875
No 217
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=7.3e-35 Score=312.46 Aligned_cols=253 Identities=28% Similarity=0.487 Sum_probs=199.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
++|++.+.||+|++|.||+|.+. .+..||+|.+.... ...+.+.+|++++++++|+|++++++++. .+..++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWN-GTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEc-CCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcEE
Confidence 56889999999999999999986 44569999876433 23467889999999999999999998753 255789
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|
T Consensus 78 v~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~d 145 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDG---------KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIAD 145 (260)
T ss_pred EEEcCCCCCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECC
Confidence 9999999999999975431 2578899999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.+......... ......++..|+|||+..+..++.++||||||+++|||++ |+.||...... ...
T Consensus 146 fg~~~~~~~~~~~---~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~---- 213 (260)
T cd05069 146 FGLARLIEDNEYT---ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR-----EVL---- 213 (260)
T ss_pred CccceEccCCccc---ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH----
Confidence 9999765332211 1112346778999999988899999999999999999999 89998632110 000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
..+.... ....+...+..+.+++.+||+.||++||+++++++.|++
T Consensus 214 -~~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 214 -EQVERGY----------------------RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -HHHHcCC----------------------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0000000 001122466789999999999999999999999999875
No 218
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.9e-35 Score=320.75 Aligned_cols=273 Identities=22% Similarity=0.361 Sum_probs=201.0
Q ss_pred hCCCCCCceeccccceeEEEEEECCC--------------CeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQD--------------GTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVI 726 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~--------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~ 726 (988)
.++|++.+.||+|+||.||+|+.... ...||+|.++... ......+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 35799999999999999999987432 2358999986542 23345789999999999999999999
Q ss_pred eecccccccCCCceEEEEeeccccchhhhcCCCCCCC-chhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccC
Q 001974 727 TSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQ-KDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDL 805 (988)
Q Consensus 727 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 805 (988)
+++. .++..++||||+++++|.+++....... .........+++..++.++.|++.||+|||+. +++||||
T Consensus 84 ~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dl 155 (295)
T cd05097 84 GVCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDL 155 (295)
T ss_pred EEEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence 9964 3478899999999999999986532110 00000112468889999999999999999998 9999999
Q ss_pred CCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh--CCCCC
Q 001974 806 KPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT--GKKPT 883 (988)
Q Consensus 806 kp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt--g~~p~ 883 (988)
||+||++++++.+||+|||++........ ........++..|+|||+..+..++.++|||||||++|||++ |..||
T Consensus 156 kp~Nill~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~ 233 (295)
T cd05097 156 ATRNCLVGNHYTIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPY 233 (295)
T ss_pred ChhhEEEcCCCcEEecccccccccccCcc--eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999999999975433221 111122345778999999988889999999999999999998 56676
Q ss_pred CccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHH
Q 001974 884 DVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITN 963 (988)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 963 (988)
...... ..... .....+... .......+..+|..+.+++.+||+.||++|||+++
T Consensus 234 ~~~~~~-----~~~~~-----~~~~~~~~~---------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~ 288 (295)
T cd05097 234 SLLSDE-----QVIEN-----TGEFFRNQG---------------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNK 288 (295)
T ss_pred cccChH-----HHHHH-----HHHhhhhcc---------------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHH
Confidence 532111 00000 000000000 00001112346778999999999999999999999
Q ss_pred HHHHHH
Q 001974 964 VVHELQ 969 (988)
Q Consensus 964 vl~~L~ 969 (988)
|++.|+
T Consensus 289 i~~~l~ 294 (295)
T cd05097 289 IHHFLR 294 (295)
T ss_pred HHHHHh
Confidence 999886
No 219
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.3e-35 Score=319.01 Aligned_cols=254 Identities=24% Similarity=0.369 Sum_probs=203.5
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.......+.+..|++++++++||||+++++++. .+...+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEE
Confidence 467999999999999999999998889999999998666556678999999999999999999999854 347889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++.... ..+++.+++.++.|++.||.|||+. +|+||||+|+||+++.++.++|+
T Consensus 79 lv~e~~~~~~L~~~~~~~~----------~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~ 145 (280)
T cd06611 79 ILIEFCDGGALDSIMLELE----------RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLA 145 (280)
T ss_pred EEeeccCCCcHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEc
Confidence 9999999999999986543 3589999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
|||.+......... .....++..|+|||.+. ...++.++||||||+++|||++|+.||..... ...
T Consensus 146 d~g~~~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----~~~ 216 (280)
T cd06611 146 DFGVSAKNKSTLQK----RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----MRV 216 (280)
T ss_pred cCccchhhcccccc----cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----HHH
Confidence 99998754332211 12245889999999874 34577899999999999999999999863211 000
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
... +.....+ ....+..++.++.+++.+||+.+|++||++.++++.
T Consensus 217 ~~~-----~~~~~~~--------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 217 LLK-----ILKSEPP--------------------TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred HHH-----HhcCCCC--------------------CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000 0000000 001122456778999999999999999999999765
No 220
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=6.5e-35 Score=319.54 Aligned_cols=273 Identities=22% Similarity=0.361 Sum_probs=204.1
Q ss_pred hCCCCCCceeccccceeEEEEEECCCC----------------eEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDG----------------TIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVK 724 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~----------------~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~ 724 (988)
.++|++.+.||+|+||.||+|.+...+ ..||+|++..... ...+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 457999999999999999999875433 5689999875432 34567889999999999999999
Q ss_pred EEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecc
Q 001974 725 VITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCD 804 (988)
Q Consensus 725 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 804 (988)
+++++. .++..++||||+++++|.+++................+++..++.++.|++.||+|||+. +|+|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 999864 347889999999999999998765421111011113689999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh--CCCC
Q 001974 805 LKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT--GKKP 882 (988)
Q Consensus 805 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt--g~~p 882 (988)
|||+||+++.++.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..|
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 233 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYY--RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQP 233 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcce--eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCC
Confidence 9999999999999999999998754332211 11122346788999999988889999999999999999998 6677
Q ss_pred CCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH
Q 001974 883 TDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT 962 (988)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 962 (988)
|...... ... .......... . .......+..++.++.+++.+||+.||++|||+.
T Consensus 234 ~~~~~~~--~~~--------~~~~~~~~~~---~------------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~ 288 (296)
T cd05051 234 YEHLTDQ--QVI--------ENAGHFFRDD---G------------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFR 288 (296)
T ss_pred CCCcChH--HHH--------HHHHhccccc---c------------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHH
Confidence 6532110 000 0000000000 0 0000111234667899999999999999999999
Q ss_pred HHHHHHH
Q 001974 963 NVVHELQ 969 (988)
Q Consensus 963 evl~~L~ 969 (988)
|+++.|+
T Consensus 289 el~~~L~ 295 (296)
T cd05051 289 EIHLFLQ 295 (296)
T ss_pred HHHHHhc
Confidence 9999885
No 221
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=8.6e-35 Score=313.74 Aligned_cols=259 Identities=27% Similarity=0.433 Sum_probs=196.6
Q ss_pred ceeccccceeEEEEEECCCCe--EEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGT--IVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|++..++. .+|+|.++... ....+.+.+|++++.++ +||||+++++++.. .+..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-----CCCceEEE
Confidence 468999999999999977765 46888876432 33446788999999999 89999999999653 46789999
Q ss_pred eeccccchhhhcCCCCCCCch-----hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 745 EFMTNGSLENWLHPDAVPQKD-----VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
||+++|+|.+++......... .......+++.++..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999754321100 001113578999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||++........ ......+..|+|||++....++.++|||||||++|||++ |..||.... ......
T Consensus 153 l~dfgl~~~~~~~~~-----~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~~~~~ 222 (270)
T cd05047 153 IADFGLSRGQEVYVK-----KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYE 222 (270)
T ss_pred ECCCCCccccchhhh-----ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC-----HHHHHH
Confidence 999999863221110 111224567999999988889999999999999999997 999985321 001100
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
. + ... .....+..++.++.+++.+||+.+|.+|||+.|+++.|+++.
T Consensus 223 ~-----~----~~~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 223 K-----L----PQG------------------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred H-----H----hCC------------------CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 0 000 000112245677899999999999999999999999998874
No 222
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.9e-35 Score=316.59 Aligned_cols=265 Identities=25% Similarity=0.400 Sum_probs=203.7
Q ss_pred hCCCCCCceeccccceeEEEEEECCC-----CeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQD-----GTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
.++|++.+.||+|+||.||+|.+... +..||+|.+.... ......+.+|+.+++.++||||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----- 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----- 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----
Confidence 46788999999999999999998643 3789999986432 233457889999999999999999999954
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.+...++||||+++++|.+++......... ......+++..++.++.|++.||+|||+. +++||||||+||+++++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~ 155 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAEN-NPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAED 155 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhh-ccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCC
Confidence 347889999999999999999654321100 00113578899999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~ 894 (988)
+.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++||+++ |..||..... .
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-----~ 228 (277)
T cd05032 156 LTVKIGDFGMTRDIYETDYY--RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-----E 228 (277)
T ss_pred CCEEECCcccchhhccCccc--ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH-----H
Confidence 99999999999755432211 11122346789999999988889999999999999999998 9999753111 0
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
.... .+. +. .....+..++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 229 ~~~~-----~~~---~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 229 EVLK-----FVI---DG-------------------GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHH-----HHh---cC-------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 0000 000 00 001122345778999999999999999999999999876
No 223
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=9.6e-35 Score=313.13 Aligned_cols=256 Identities=23% Similarity=0.313 Sum_probs=200.2
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
+.+++.+.....||+|+||.||+|.+..+++.||+|.+........+.+.+|+.+++.++|+||+++++++.. ++
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~ 78 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSE-----NG 78 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-----CC
Confidence 3455666677899999999999999988899999999876655566789999999999999999999998643 47
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcC--CHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-C
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKL--TLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN-D 815 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l--~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~ 815 (988)
..++|+||+++++|.+++.... ..+ ++..+..++.||+.|++|||+. +|+||||||+||+++. +
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~ 145 (268)
T cd06624 79 FFKIFMEQVPGGSLSALLRSKW----------GPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYS 145 (268)
T ss_pred EEEEEEecCCCCCHHHHHHHhc----------ccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCC
Confidence 8899999999999999987542 133 7788889999999999999998 9999999999999976 6
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCC--CCCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS--EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
+.++|+|||.+........ ......++..|+|||++.+. .++.++||||||+++|+|++|+.||........
T Consensus 146 ~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-- 219 (268)
T cd06624 146 GVVKISDFGTSKRLAGINP----CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-- 219 (268)
T ss_pred CeEEEecchhheecccCCC----ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--
Confidence 7999999999875533211 11123478999999998664 378899999999999999999999863211100
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..+.. .. .......+..+++++.+++.+||+.+|++|||+.|+++
T Consensus 220 ~~~~~-----~~-----------------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 220 AMFKV-----GM-----------------------FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hHhhh-----hh-----------------------hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00000 00 00001112346677899999999999999999999876
No 224
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.4e-35 Score=325.94 Aligned_cols=256 Identities=21% Similarity=0.250 Sum_probs=196.3
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|+...+++.||+|++... .....+.+.+|+.++..++|+||+++++++. .++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQ-----DENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEe-----cCCe
Confidence 4799999999999999999999989999999998642 2233456888999999999999999999854 4588
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~k 142 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE----------DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIR 142 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEE
Confidence 999999999999999986532 2588899999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC-----CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-----SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
|+|||++.......... .....||+.|+|||++.. ..++.++||||+||++|||++|+.||... ...
T Consensus 143 l~Dfg~~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~-----~~~ 214 (331)
T cd05597 143 LADFGSCLRLLADGTVQ---SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE-----SLV 214 (331)
T ss_pred EEECCceeecCCCCCcc---ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC-----CHH
Confidence 99999987544322111 112358999999999863 45788999999999999999999998632 111
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCC--CCCCHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQ--DRMSITNVVHE 967 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~ 967 (988)
.......... ... ........++.++.+++.+|+..+++ .||+++++++.
T Consensus 215 ~~~~~i~~~~------~~~-----------------~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 215 ETYGKIMNHK------EHF-----------------QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred HHHHHHHcCC------Ccc-----------------cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1111100000 000 00011123677789999998765443 37899998876
No 225
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.4e-34 Score=313.84 Aligned_cols=259 Identities=24% Similarity=0.412 Sum_probs=205.3
Q ss_pred CCCCCCceeccccceeEEEEEECCCCe----EEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGT----IVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.+|++.+.||+|+||.||+|.++.+|+ .||+|..+.... .....+.+|+.++++++||||++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 568889999999999999999876654 589998864432 334678899999999999999999998643
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||+++|+|.+++.... ..+++..+..++.||+.|++|||+. +++||||||+||++++++.
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~ 147 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHK----------DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQH 147 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCe
Confidence 67899999999999999997654 2588999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
+||+|||.++......... ......++..|+|||.+....++.++||||||+++||+++ |+.||..... ...
T Consensus 148 ~kL~dfg~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~ 220 (279)
T cd05057 148 VKITDFGLAKLLDVDEKEY--HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-----VEI 220 (279)
T ss_pred EEECCCcccccccCcccce--ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-----HHH
Confidence 9999999998654322211 1112224678999999988889999999999999999999 9999864211 111
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
... +.. ......+..++..+.+++.+||..||++||++.++++.|+++.+.
T Consensus 221 ~~~-----~~~----------------------~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 221 PDL-----LEK----------------------GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHH-----HhC----------------------CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 100 000 000111224556789999999999999999999999999998653
No 226
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=5.4e-38 Score=335.05 Aligned_cols=364 Identities=24% Similarity=0.372 Sum_probs=243.0
Q ss_pred CcEEEEEcCCCCCc-ccccccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceee
Q 001974 32 RRVTVLNLRSKGLS-GSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILF 110 (988)
Q Consensus 32 ~~v~~l~l~~~~~~-~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (988)
+-|+..|+++|.++ +..|.+...++.++.|-|...++. .+|+.++.+.+|++|.+++|++. .+-+.++.|+.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 45788899999998 678999999999999999999999 89999999999999999999999 8888999999999999
Q ss_pred cCcccccC-CCcccccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCccccccccccccccc
Q 001974 111 LGRNKLMG-SIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLS 189 (988)
Q Consensus 111 L~~N~i~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 189 (988)
+.+|++.. -+|..+..|..|..|+|++|+++ ..|..+..-+++-+|+||+|+|..++...|.+|+.|-.||||+|++.
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe 163 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE 163 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh
Confidence 99999974 46888999999999999999999 78999999999999999999999555566789999999999999999
Q ss_pred CccchhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccc
Q 001974 190 GIIPPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNF 269 (988)
Q Consensus 190 ~~~~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~ 269 (988)
.+|..+..+..|+.|+|++|.+.. ..-.-.-.+++|..|.+++.+-+ ..-+|..+
T Consensus 164 -~LPPQ~RRL~~LqtL~Ls~NPL~h-fQLrQLPsmtsL~vLhms~TqRT-----------------------l~N~Ptsl 218 (1255)
T KOG0444|consen 164 -MLPPQIRRLSMLQTLKLSNNPLNH-FQLRQLPSMTSLSVLHMSNTQRT-----------------------LDNIPTSL 218 (1255)
T ss_pred -hcCHHHHHHhhhhhhhcCCChhhH-HHHhcCccchhhhhhhcccccch-----------------------hhcCCCch
Confidence 778888888888888888887651 00000002333444444433322 11223333
Q ss_pred cCCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCCcccc
Q 001974 270 GGMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIPSGIG 349 (988)
Q Consensus 270 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~~~~~ 349 (988)
..+.+|..+|+|.| .+. .+|+.+..+. +|+.|+||+|+|+ .+.-..+
T Consensus 219 d~l~NL~dvDlS~N------------------------------~Lp-~vPecly~l~-~LrrLNLS~N~it-eL~~~~~ 265 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSEN------------------------------NLP-IVPECLYKLR-NLRRLNLSGNKIT-ELNMTEG 265 (1255)
T ss_pred hhhhhhhhcccccc------------------------------CCC-cchHHHhhhh-hhheeccCcCcee-eeeccHH
Confidence 33333333333333 333 3444444443 3444444444444 3333334
Q ss_pred CCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCC-CCCCCCCCCCCCCEEEccccccccccccccccccccce
Q 001974 350 NLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSG-EIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLAI 428 (988)
Q Consensus 350 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 428 (988)
...+|..|+||+|+++ .+|+.+++++.|+.|++.+|+++- -+|+.++.+.+|+.+..++|.+. ..|+.++.|..|+.
T Consensus 266 ~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~k 343 (1255)
T KOG0444|consen 266 EWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQK 343 (1255)
T ss_pred HHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHH
Confidence 4444555555555554 455555555555555555555431 24444555555555555555554 44555555555555
Q ss_pred eecCCCCCCccCchhhhhhcccccceeccccc
Q 001974 429 LHLFENGLNGTIPEEIFNLTYLSNSLNLARNH 460 (988)
Q Consensus 429 L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~ 460 (988)
|.|+.|++. ++|+.+.-++.+ +.||+..|.
T Consensus 344 L~L~~NrLi-TLPeaIHlL~~l-~vLDlreNp 373 (1255)
T KOG0444|consen 344 LKLDHNRLI-TLPEAIHLLPDL-KVLDLRENP 373 (1255)
T ss_pred hccccccee-echhhhhhcCCc-ceeeccCCc
Confidence 555555554 455555444444 445554443
No 227
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5e-35 Score=319.85 Aligned_cols=251 Identities=24% Similarity=0.291 Sum_probs=203.1
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
..+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++|+||+++++++. .++..+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEEE
Confidence 367999999999999999999998899999999997655555677889999999999999999999864 347899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++... .+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+
T Consensus 93 lv~e~~~~~~L~~~~~~~------------~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~ 157 (297)
T cd06656 93 VVMEYLAGGSLTDVVTET------------CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLT 157 (297)
T ss_pred EeecccCCCCHHHHHHhC------------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEC
Confidence 999999999999998542 468889999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.+......... .....+++.|+|||.+.+..++.++|||||||++|++++|+.||.........
T Consensus 158 Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~--------- 224 (297)
T cd06656 158 DFGFCAQITPEQSK----RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL--------- 224 (297)
T ss_pred cCccceEccCCccC----cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe---------
Confidence 99998754332211 11235788999999999988999999999999999999999998632111000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.... ... ......+...+..+.+++.+||+.+|++||+++++++
T Consensus 225 ----~~~~----~~~-------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 225 ----YLIA----TNG-------------TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ----eeec----cCC-------------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 000 0000112245677899999999999999999999987
No 228
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=7.5e-35 Score=318.04 Aligned_cols=270 Identities=23% Similarity=0.260 Sum_probs=207.4
Q ss_pred cCHHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeeccc
Q 001974 653 VSYESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSS 731 (988)
Q Consensus 653 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 731 (988)
+.++++..+.++|++.+.||+|+||.||+|....+++.+|+|++.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 344556667889999999999999999999998899999999986432 2346678899999999 89999999999865
Q ss_pred ccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCee
Q 001974 732 IDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVL 811 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 811 (988)
.+....+..++||||+++++|.++++..... ...+++..++.++.|++.||+|||+. +++||||||+||+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~-------~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nil 160 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLIC-------GQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNIL 160 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhc-------CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEE
Confidence 4333446789999999999999988642211 13688999999999999999999998 9999999999999
Q ss_pred eCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCC-----CCCCccchHHHHHHHHHHHhCCCCCCcc
Q 001974 812 LDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-----EVSTNGDIYSYGILLLEMVTGKKPTDVM 886 (988)
Q Consensus 812 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~vl~elltg~~p~~~~ 886 (988)
+++++.+||+|||.+......... .....|+..|+|||.+... .++.++|||||||++|||++|+.||...
T Consensus 161 i~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 161 LTTEGGVKLVDFGVSAQLTSTRLR----RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred EcCCCCEEEeecccchhccccccc----ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 999999999999998765432211 1224578899999987643 3688999999999999999999998632
Q ss_pred ccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 887 FEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... ..... +.....+ ....+...+..+.+++.+||+.+|++||++.|+++
T Consensus 237 ~~~-----~~~~~-----~~~~~~~--------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 237 HPV-----KTLFK-----IPRNPPP--------------------TLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cHH-----HHHHH-----HhcCCCC--------------------CCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 110 00000 0000000 00111234567899999999999999999999986
Q ss_pred H
Q 001974 967 E 967 (988)
Q Consensus 967 ~ 967 (988)
.
T Consensus 287 ~ 287 (291)
T cd06639 287 H 287 (291)
T ss_pred C
Confidence 3
No 229
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.7e-35 Score=312.26 Aligned_cols=256 Identities=27% Similarity=0.498 Sum_probs=204.0
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
..++|++.+.||+|+||.||+|... +++.||+|.+.... ...+++.+|+.++++++|+||+++++++. .+...
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCS-----EEEPI 76 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeee-----cCCce
Confidence 4578999999999999999999985 66789999987433 34467999999999999999999999854 34778
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+||
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~---------~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l 144 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEG---------KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKI 144 (261)
T ss_pred EEEEeccCCCCHHHHHhcccc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEE
Confidence 999999999999999976432 3588999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||.++...... ........++..|+|||.+.+..++.++||||+|+++||+++ |+.||..... .....
T Consensus 145 ~d~g~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~- 215 (261)
T cd05034 145 ADFGLARLIEDDE---YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN-----REVLE- 215 (261)
T ss_pred Cccccceeccchh---hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH-
Confidence 9999997654311 111112235678999999998889999999999999999999 9999853210 00000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
.+... .....+...+.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 216 ----~~~~~----------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 216 ----QVERG----------------------YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----HHHcC----------------------CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00000 0001123457789999999999999999999999998875
No 230
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.8e-35 Score=331.12 Aligned_cols=278 Identities=20% Similarity=0.226 Sum_probs=197.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
..+|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|++++++++|+||+++++++.. ++..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVV-----GGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEEE
Confidence 457999999999999999999999899999999642 2345689999999999999999998543 47789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|||++ .++|.+++.... ..+++.+++.|+.||+.||+|||+. +||||||||+|||++.++.+||+
T Consensus 237 lv~e~~-~~~L~~~l~~~~----------~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~ 302 (461)
T PHA03211 237 LVLPKY-RSDLYTYLGARL----------RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLG 302 (461)
T ss_pred EEEEcc-CCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEc
Confidence 999999 578988886433 2689999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccC--CcchHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEG--DLNLHNYART 899 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~--~~~~~~~~~~ 899 (988)
|||+++....... ........||..|+|||++.+..++.++|||||||++|||++|..|+-..... ...+......
T Consensus 303 DFGla~~~~~~~~--~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~ 380 (461)
T PHA03211 303 DFGAACFARGSWS--TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILR 380 (461)
T ss_pred ccCCceecccccc--cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHH
Confidence 9999986543221 11122356999999999999999999999999999999999988764322111 1111111111
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHh---hhh-----hccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLR---QAK-----INGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.+... ....+.........+......+.. ... ..........+.+|+.+||+.||++|||++|+++.
T Consensus 381 ~i~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 381 IIRQA-QVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHhh-ccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11110 000000000000000000000000 000 00011234568899999999999999999999864
No 231
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.1e-35 Score=314.68 Aligned_cols=253 Identities=26% Similarity=0.422 Sum_probs=197.9
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhH--HHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASK--SFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
|++++.||+|+||+||+|....+++.||+|++......... ...+|+.++++++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 56789999999999999999999999999999865443322 34569999999999999999999543 588899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++... ..+++.+++.++.|+++||+|||+. +|+||||||+||++++++.++|+|
T Consensus 76 v~~~~~~~~L~~~l~~~-----------~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~D 141 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKN-----------KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLID 141 (260)
T ss_dssp EEEEETTEBHHHHHHHH-----------SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESS
T ss_pred ccccccccccccccccc-----------ccccccccccccccccccccccccc---cccccccccccccccccccccccc
Confidence 99999999999998722 3689999999999999999999999 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccC-CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.+...... ........++..|+|||++. +..++.++||||+|+++|+|++|..||...... +.........
T Consensus 142 fg~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~ 215 (260)
T PF00069_consen 142 FGSSVKLSEN----NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKIL 215 (260)
T ss_dssp GTTTEESTST----TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHH
T ss_pred cccccccccc----ccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhcc
Confidence 9999754111 11122345899999999998 788999999999999999999999998743000 0001111000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
...... ........+.++.+++.+||+.||++||++.++++
T Consensus 216 ~~~~~~------------------------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 216 KRPLPS------------------------SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HTHHHH------------------------HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccccc------------------------cccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000 00000122367999999999999999999999975
No 232
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.2e-35 Score=321.48 Aligned_cols=207 Identities=24% Similarity=0.310 Sum_probs=163.2
Q ss_pred CceeccccceeEEEEEEC--CCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 668 THLIGMGSFGSVYKGAFD--QDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
.++||+|+||+||+|+++ .+++.||+|.++.. .....+.+|+.++++++||||+++++++... .+...++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSH---ADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecC---CCcEEEEEEe
Confidence 468999999999999975 36688999998643 2335678999999999999999999986432 3466899999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee----CCCCcEEEe
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL----DNDMIAHVG 821 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~ 821 (988)
|+ +++|.+++......... .....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~--~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKAN--KKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred cc-CCCHHHHHHhccccccc--CCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEe
Confidence 99 56888887543221100 0113588999999999999999999998 99999999999999 456799999
Q ss_pred eecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCcc
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVM 886 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~ 886 (988)
|||+++........ ........||+.|+|||++.+ ..++.++||||+||++|||++|++||...
T Consensus 155 DfG~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 155 DMGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred ecCceeccCCCCcc-ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99999865432211 111223568999999999877 45889999999999999999999999643
No 233
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.5e-34 Score=310.70 Aligned_cols=257 Identities=27% Similarity=0.469 Sum_probs=202.7
Q ss_pred ceeccccceeEEEEEECCC---CeEEEEEEeeccccch-hHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQD---GTIVAIKVFNLQRHGA-SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|.+... +..||+|+++...... .+.+.+|++.++.++|+|++++++++.. +...++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4689999999999999765 8899999997554333 5788999999999999999999998643 57899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|.+++....... .......+++.+++.++.|++.|++|||+. +++||||+|+||++++++.+||+|||
T Consensus 76 e~~~~~~L~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg 150 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVF--PSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFG 150 (262)
T ss_pred EeccCCcHHHHHhhccccc--cccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccc
Confidence 9999999999997752110 000013689999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
.+........ ........++..|+|||.+....++.++||||+|+++|||++ |..||..... .....
T Consensus 151 ~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~----- 218 (262)
T cd00192 151 LSRDVYDDDY--YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-----EEVLE----- 218 (262)
T ss_pred cccccccccc--cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-----HHHHH-----
Confidence 9986654321 111223457889999999988889999999999999999999 6999874311 01100
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
.+.. ......+..++.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 219 ~~~~----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 219 YLRK----------------------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHc----------------------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0000 0011123356788999999999999999999999998873
No 234
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.9e-35 Score=320.35 Aligned_cols=278 Identities=22% Similarity=0.317 Sum_probs=200.3
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.++|++.+.||+|+||.||+|.+..+++.||+|.++... ......+.+|+.++++++||||+++++++. .++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-----~~~~~ 79 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSL 79 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-----cCCeE
Confidence 357999999999999999999998899999999987443 233456788999999999999999999954 44789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++ ++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~----------~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl 145 (301)
T cd07873 80 TLVFEYLD-KDLKQYLDDCG----------NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKL 145 (301)
T ss_pred EEEEeccc-cCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEE
Confidence 99999995 68988886543 2578889999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||++........ ......+++.|+|||++.+ ..++.++|||||||++|||++|+.||...... ........
T Consensus 146 ~dfg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~ 219 (301)
T cd07873 146 ADFGLARAKSIPTK----TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFR 219 (301)
T ss_pred CcCcchhccCCCCC----cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHH
Confidence 99999975432211 1122347889999998765 45788999999999999999999998632111 00011100
Q ss_pred HHhhhhhhhhccccccCcchhhhhh-HHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATN-KQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
................ ..+.... ..............+++.+.+++.+|++.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 220 ILGTPTEETWPGILSN--EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HcCCCChhhchhhhcc--ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000000000000000 0000000 000000000112356778899999999999999999999986
No 235
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.6e-34 Score=311.32 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=199.6
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc---------hhHHHHHHHHHHHhcCCCCceEEEeecccccc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG---------ASKSFLAECKALKNIRHRNLVKVITSCSSIDF 734 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 734 (988)
+|.+.+.||+|++|.||+|.+..+++.||+|.+...... ..+.+.+|+.++++++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 477889999999999999999888999999988643221 1256888999999999999999999854
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 814 (988)
..+..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||++++
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~ 141 (267)
T cd06628 77 -DADHLNIFLEYVPGGSVAALLNNYG-----------AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDN 141 (267)
T ss_pred -eCCccEEEEEecCCCCHHHHHHhcc-----------CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcC
Confidence 3478899999999999999996543 578889999999999999999998 9999999999999999
Q ss_pred CCcEEEeeeccccccccccccc--ceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 001974 815 DMIAHVGDFGLARVRQEVSNLT--QSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLN 892 (988)
Q Consensus 815 ~~~~kL~DfG~a~~~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 892 (988)
++.++|+|||.++......... ........|+..|+|||.+.+..++.++||||+||++|+|++|+.||.....
T Consensus 142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---- 217 (267)
T cd06628 142 KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---- 217 (267)
T ss_pred CCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----
Confidence 9999999999998664321110 1111123478899999999988899999999999999999999999863211
Q ss_pred hHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... .. .+.... ....+...+..+.+++.+||+.||++||++.|+++
T Consensus 218 ~~~-~~-----~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 218 LQA-IF-----KIGENA----------------------SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHH-HH-----HHhccC----------------------CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000 00 000000 01112346778999999999999999999999976
No 236
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.7e-34 Score=307.84 Aligned_cols=247 Identities=28% Similarity=0.452 Sum_probs=194.7
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
++||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++.. .+..++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-----RQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-----CCccEEEEECC
Confidence 46899999999999875 788999999864432 223468899999999999999999998643 36789999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++++|.+++.... ..+++..+..++.|++.||.|+|+. +++||||||+||++++++.+||+|||++.
T Consensus 75 ~~~~L~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~ 141 (250)
T cd05085 75 PGGDFLSFLRKKK----------DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSR 141 (250)
T ss_pred CCCcHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccce
Confidence 9999999986543 2578899999999999999999998 99999999999999999999999999987
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVI 906 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (988)
....... .......++..|+|||++.+..++.++||||||+++||+++ |..||...... .. .......
T Consensus 142 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-----~~-~~~~~~~-- 210 (250)
T cd05085 142 QEDDGIY---SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-----QA-REQVEKG-- 210 (250)
T ss_pred ecccccc---ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-----HH-HHHHHcC--
Confidence 5432211 11111234678999999998899999999999999999998 99998632110 00 0000000
Q ss_pred hhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 907 DIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 907 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
.....+..++..+.+++.+||+.+|++||++.|+++.|.
T Consensus 211 ------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 ------------------------YRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ------------------------CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 001112356778999999999999999999999999875
No 237
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.3e-34 Score=315.27 Aligned_cols=278 Identities=27% Similarity=0.332 Sum_probs=198.6
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|++|.||+|+...+++.||+|+++... ....+.+.+|+.++++++||||+++++++. .++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 4788999999999999999998899999999986432 223467889999999999999999999954 457899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||++ ++|.+++...... ..+++.+++.++.|++.||+|||+. +++||||||+||++++++.+||+
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~~--------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 143 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPKG--------QYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLA 143 (285)
T ss_pred EEEecCC-CCHHHHHhcCCCC--------CcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEEC
Confidence 9999996 6888888653311 2588999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||++........ ......+++.|+|||++.+. .++.++|||||||++|||+||+.||......+. .......
T Consensus 144 dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~- 217 (285)
T cd07861 144 DFGLARAFGIPVR----VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRI- 217 (285)
T ss_pred cccceeecCCCcc----cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHH-
Confidence 9999975432211 11123468899999987654 578899999999999999999999863211100 0000000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
........... .....++..................+++++.+++.+||+.||++|||+.++++
T Consensus 218 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 218 LGTPTEDVWPG--VTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hCCCChhhhhc--chhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000000000 00000000000000000001112246778899999999999999999999875
No 238
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=5.1e-35 Score=325.85 Aligned_cols=287 Identities=21% Similarity=0.247 Sum_probs=203.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.++|++.+.||+|+||.||+|.+..+|+.||+|+++.. .......+.+|+.++++++|+||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 47899999999999999999999989999999998643 23344678889999999999999999998766555555678
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++|+||++ +++.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 84 ~lv~e~~~-~~l~~~~~~~------------~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl 147 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ------------HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKI 147 (336)
T ss_pred EEEehhcc-cCHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEE
Confidence 99999995 6888777532 588999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||++........... ......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||..... .........
T Consensus 148 ~dfg~~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~ 224 (336)
T cd07849 148 CDFGLARIADPEHDHTG-FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILG 224 (336)
T ss_pred CcccceeeccccccccC-CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH
Confidence 99999976543222111 1123458899999998654 5688999999999999999999999863210 000000000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.......+..+.........+...................+.++.+++.+||+.||++|||+.|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 225 VLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000000000000000000000000000000112346778999999999999999999999886
No 239
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.3e-34 Score=308.30 Aligned_cols=252 Identities=24% Similarity=0.347 Sum_probs=200.9
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|++|.||+|.+..+++.||+|.+.... ....+.+.+|++++++++|+|++++++.+.. .+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG----EDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----CCCEEE
Confidence 5889999999999999999998889999999986432 2334578899999999999999999987432 234678
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.++|+
T Consensus 77 lv~e~~~~~~l~~~l~~~~~---------~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~ 144 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKG---------KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVG 144 (257)
T ss_pred EEecccCCCcHHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEe
Confidence 99999999999999875321 3588999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++........ ......+++.|+|||+..+..++.++||||+|+++|+|++|+.||... +.........
T Consensus 145 df~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~-----~~~~~~~~~~ 215 (257)
T cd08223 145 DLGIARVLENQCD----MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK-----DMNSLVYRII 215 (257)
T ss_pred cccceEEecccCC----ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHH
Confidence 9999976543221 122345789999999999999999999999999999999999998631 1111111100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. .. ...+...++++.+++.+||+.+|++||++.++++.
T Consensus 216 ~~--------~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 216 EG--------KL-------------------PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred hc--------CC-------------------CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 00 01122456779999999999999999999999863
No 240
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=9.1e-35 Score=311.18 Aligned_cols=251 Identities=25% Similarity=0.350 Sum_probs=202.9
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|+..+.||+|+||.||+|.+..+++.||+|.++.... .+++.+|++++++++||||+++++++. .+...+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 74 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLW 74 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEE
Confidence 3679999999999999999999988899999999865432 678999999999999999999999854 347899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+++||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+
T Consensus 75 l~~e~~~~~~L~~~l~~~~----------~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~ 141 (256)
T cd06612 75 IVMEYCGAGSVSDIMKITN----------KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLA 141 (256)
T ss_pred EEEecCCCCcHHHHHHhCc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEc
Confidence 9999999999999986543 3689999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++........ ......++..|+|||++.+..++.++||||||+++|+|++|+.||........ ..
T Consensus 142 dfg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-----~~--- 209 (256)
T cd06612 142 DFGVSGQLTDTMA----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-----IF--- 209 (256)
T ss_pred ccccchhcccCcc----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-----hh---
Confidence 9999986544321 11123478899999999988999999999999999999999999864211100 00
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.+.. ... .....+..++.++.+++.+||+.||++|||+.|+++
T Consensus 210 --~~~~----~~~----------------~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 210 --MIPN----KPP----------------PTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --hhcc----CCC----------------CCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0000 000 000111235567899999999999999999999975
No 241
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-34 Score=313.28 Aligned_cols=240 Identities=22% Similarity=0.352 Sum_probs=185.3
Q ss_pred eeccccceeEEEEEECCC------------------------CeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEE
Q 001974 670 LIGMGSFGSVYKGAFDQD------------------------GTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKV 725 (988)
Q Consensus 670 ~lg~G~~g~Vy~a~~~~~------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 725 (988)
.||+|+||.||+|....+ ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 689999999999985321 23589999875544455678889999999999999999
Q ss_pred EeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccC
Q 001974 726 ITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDL 805 (988)
Q Consensus 726 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 805 (988)
+++|.. +...++||||+++|+|..++.... ..+++..+..++.||++||+|||++ +|+||||
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dl 143 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLRKEK----------GRVPVAWKITVAQQLASALSYLEDK---NLVHGNV 143 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCC
Confidence 999754 367899999999999999986543 3578889999999999999999998 9999999
Q ss_pred CCCCeeeCCCC-------cEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHH
Q 001974 806 KPGNVLLDNDM-------IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMV 877 (988)
Q Consensus 806 kp~NIll~~~~-------~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~ell 877 (988)
||+||+++..+ .+|++|||.+....... ...++..|+|||.+.+ ..++.++|||||||++||++
T Consensus 144 kp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~--------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~ 215 (274)
T cd05076 144 CAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE--------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEIC 215 (274)
T ss_pred CcccEEEeccCcccCccceeeecCCcccccccccc--------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHH
Confidence 99999997643 48999999886432211 1246788999998865 56899999999999999995
Q ss_pred -hCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCC
Q 001974 878 -TGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQ 956 (988)
Q Consensus 878 -tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 956 (988)
+|+.||......+ ...+ ... ....+......+.+++.+||+.+|+
T Consensus 216 ~~g~~p~~~~~~~~--~~~~------------~~~--------------------~~~~~~~~~~~~~~li~~cl~~~p~ 261 (274)
T cd05076 216 FDGEVPLKERTPSE--KERF------------YEK--------------------KHRLPEPSCKELATLISQCLTYEPT 261 (274)
T ss_pred hCCCCCccccChHH--HHHH------------HHh--------------------ccCCCCCCChHHHHHHHHHcccChh
Confidence 6999976321110 0000 000 0001112335688999999999999
Q ss_pred CCCCHHHHHHHHH
Q 001974 957 DRMSITNVVHELQ 969 (988)
Q Consensus 957 ~RPs~~evl~~L~ 969 (988)
+|||++++++.|+
T Consensus 262 ~Rps~~~il~~L~ 274 (274)
T cd05076 262 QRPSFRTILRDLT 274 (274)
T ss_pred hCcCHHHHHHhhC
Confidence 9999999998873
No 242
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.3e-34 Score=308.06 Aligned_cols=251 Identities=21% Similarity=0.302 Sum_probs=203.4
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|+..+.||+|+||.||.++...+++.|++|.+.... ....+.+.+|++++++++|+||+++++++. +.+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 5888999999999999999999899999999986442 344567889999999999999999999954 447899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.+||+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~ 143 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKG---------QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLG 143 (256)
T ss_pred EEEEecCCCcHHHHHHhccc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEEC
Confidence 99999999999999975431 3578999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.+........ ......++..|+|||+..+..++.++||||||+++|||++|..||.... .........
T Consensus 144 d~~~~~~~~~~~~----~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~ 214 (256)
T cd08221 144 DFGISKILGSEYS----MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN-----PLNLVVKIV 214 (256)
T ss_pred cCcceEEcccccc----cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHH
Confidence 9999976543221 1223458999999999988889999999999999999999999986321 111111000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.... ......++.++.+++.+||+.+|++||+++|+++.
T Consensus 215 --------~~~~-------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 215 --------QGNY-------------------TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred --------cCCC-------------------CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0000 00112456779999999999999999999999875
No 243
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.9e-34 Score=308.84 Aligned_cols=251 Identities=24% Similarity=0.409 Sum_probs=198.4
Q ss_pred ceeccccceeEEEEEECC-CC--eEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQ-DG--TIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~-~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|++|.||+|.+.. .+ ..||+|.++.... ...+.+.+|+.++++++||||+++++++. . ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence 468999999999999864 33 3699999976555 55678999999999999999999999853 2 6789999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|.+++..... ..+++..++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||
T Consensus 75 e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg 142 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL---------GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFG 142 (257)
T ss_pred EecCCCcHHHHHHhccc---------ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccc
Confidence 99999999999876431 2578999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
+++........ ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +.....
T Consensus 143 ~~~~~~~~~~~-~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~--- 213 (257)
T cd05040 143 LMRALPQNEDH-YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----QILKKI--- 213 (257)
T ss_pred ccccccccccc-eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH---
Confidence 99876442221 111122447789999999998899999999999999999999 99998632111 110000
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
.. . ......+...|..+.+++.+||+.+|++|||++|+++.|.
T Consensus 214 --~~---~------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 214 --DK---E------------------GERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --Hh---c------------------CCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00 0 0000112246778999999999999999999999999875
No 244
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.2e-34 Score=309.93 Aligned_cols=254 Identities=21% Similarity=0.274 Sum_probs=196.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-----cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-----HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.+|+..+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++... .+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR---AE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC---CC
Confidence 46899999999999999999998899999999986432 12335688899999999999999999986431 23
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++++||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||+|+||+++.++.
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~ 144 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG-----------ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGN 144 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCC
Confidence 66789999999999999986542 578888999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
+||+|||+++......... .......++..|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 145 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~-----~~~~ 218 (266)
T cd06651 145 VKLGDFGASKRLQTICMSG-TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA-----MAAI 218 (266)
T ss_pred EEEccCCCccccccccccC-CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch-----HHHH
Confidence 9999999987543321111 111224578899999999998899999999999999999999999863211 0000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. ....... ...+...++.+.+++ +||..+|++||+++|+++
T Consensus 219 ~~----~~~~~~~----------------------~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 219 FK----IATQPTN----------------------PQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HH----HhcCCCC----------------------CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 00 0000000 011123455677787 688899999999999975
No 245
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-34 Score=315.45 Aligned_cols=263 Identities=23% Similarity=0.321 Sum_probs=203.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++.. ....+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-----ENNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-----CCEEE
Confidence 56888899999999999999998889999999986443 3345678999999999999999999999643 47899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++.... .+++..+..++.+++.|+.|||+. .+++||||+|+||++++++.++|+
T Consensus 80 lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~ 146 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGG-----------PIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLC 146 (284)
T ss_pred EEEecCCCCCHHHHHHhcc-----------CCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEc
Confidence 9999999999999886532 578999999999999999999973 289999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++....... .....|+..|+|||++.+..++.++|||||||++|++++|+.||......+.. ......+
T Consensus 147 d~gl~~~~~~~~------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~--~~~~~~~ 218 (284)
T cd06620 147 DFGVSGELINSI------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG--QDDPMGI 218 (284)
T ss_pred cCCcccchhhhc------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh--hhhhhHH
Confidence 999986542211 11245899999999998889999999999999999999999999753322110 0000000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
.+........ .... .....++.++.+++.+||+.||++|||+.|+++...
T Consensus 219 ~~~~~~~~~~----~~~~--------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 219 LDLLQQIVQE----PPPR--------------LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred HHHHHHHhhc----cCCC--------------CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0000000000 0000 001136678999999999999999999999998643
No 246
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.7e-34 Score=314.59 Aligned_cols=276 Identities=23% Similarity=0.309 Sum_probs=200.4
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|+..+.||+|++|.||+|.+..+|+.||+|++.... ....+.+.+|+.++++++|||++++++++. .+...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCCEE
Confidence 46899999999999999999998889999999986432 223456889999999999999999999854 44788
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++++.+..+..... .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l 141 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPR-----------GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKL 141 (286)
T ss_pred EEEEeccCccHHHHHHhCCC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEE
Confidence 99999999988888765432 588999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||++......... .....++..|+|||++.+ ..++.++||||||+++|||++|+.||......+ .......
T Consensus 142 ~dfg~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~ 215 (286)
T cd07847 142 CDFGFARILTGPGDD----YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD--QLYLIRK 215 (286)
T ss_pred CccccceecCCCccc----ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHH
Confidence 999999865443211 112347889999999876 557899999999999999999999986432111 0000111
Q ss_pred HHhhhh---hhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDHV---IDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~~---~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.....+ .+..+..... .......... ...........+..+.+++.+||+.||++||++.|++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 216 TLGDLIPRHQQIFSTNQFF--KGLSIPEPET-REPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HhCCCChHHhhhccccccc--ccccCCCccc-ccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 100000 0000000000 0000000000 00000011235677899999999999999999999875
No 247
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.5e-34 Score=314.90 Aligned_cols=255 Identities=21% Similarity=0.281 Sum_probs=199.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|++.+.||+|+||.||+|.+..+++.||+|.++.. .......+.+|+.++++++||||+++++++. .++..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-----IEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-----cCCeEE
Confidence 4688999999999999999999889999999998654 2233467889999999999999999999854 357899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|..++..... ...+++..+..++.|++.|+.|||+. .+|+||||||+||+++.++.+||+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~ 145 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA--------TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLC 145 (286)
T ss_pred EEEeecCCCCHHHHHHhccc--------cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEe
Confidence 99999999999999865321 13689999999999999999999963 289999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC------CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS------EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
|||.+....... .....++..|+|||.+.+. .++.++|||||||++|||++|+.||...... .
T Consensus 146 dfg~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~ 214 (286)
T cd06622 146 DFGVSGNLVASL------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----N 214 (286)
T ss_pred ecCCcccccCCc------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----h
Confidence 999987543221 1123478899999998654 3478999999999999999999998632110 0
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. ..+....+. .....+..++.++.+++.+||+.+|++||+++++++.
T Consensus 215 ~~-----~~~~~~~~~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 215 IF-----AQLSAIVDG-------------------DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HH-----HHHHHHhhc-------------------CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 00 000000000 0011223467788999999999999999999999874
No 248
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.5e-34 Score=314.26 Aligned_cols=266 Identities=24% Similarity=0.293 Sum_probs=206.0
Q ss_pred cCHHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeeccc
Q 001974 653 VSYESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSS 731 (988)
Q Consensus 653 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 731 (988)
.+..++..+.+.|++.+.||+|+||.||+|++..+++.||+|++.... .....+..|+.+++++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 345556667788999999999999999999998899999999986543 2345688899999998 79999999998753
Q ss_pred ccc-cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCe
Q 001974 732 IDF-QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNV 810 (988)
Q Consensus 732 ~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 810 (988)
... ......++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||+|+||
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~ni 152 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG---------NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNV 152 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHE
Confidence 211 234678999999999999999865432 2577888999999999999999998 999999999999
Q ss_pred eeCCCCcEEEeeecccccccccccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 811 LLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 811 ll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
++++++.++|+|||++........ ......|+..|+|||.+. ...++.++|||||||++|||++|+.||..
T Consensus 153 li~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~ 228 (282)
T cd06636 153 LLTENAEVKLVDFGVSAQLDRTVG----RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCD 228 (282)
T ss_pred EECCCCCEEEeeCcchhhhhcccc----CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccc
Confidence 999999999999999875432211 112345889999999875 34678899999999999999999999863
Q ss_pred cccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 886 MFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
..... . ......... .......++.++.+++.+||+.||.+||++.|++
T Consensus 229 ~~~~~----~---------~~~~~~~~~------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell 277 (282)
T cd06636 229 MHPMR----A---------LFLIPRNPP------------------PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLL 277 (282)
T ss_pred cCHHh----h---------hhhHhhCCC------------------CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHh
Confidence 21100 0 000000000 0001124677899999999999999999999987
Q ss_pred H
Q 001974 966 H 966 (988)
Q Consensus 966 ~ 966 (988)
+
T Consensus 278 ~ 278 (282)
T cd06636 278 K 278 (282)
T ss_pred c
Confidence 5
No 249
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.4e-34 Score=315.44 Aligned_cols=267 Identities=24% Similarity=0.408 Sum_probs=203.2
Q ss_pred hCCCCCCceeccccceeEEEEEEC-----CCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFD-----QDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
.++|++.+.||+|+||.||+|.+. .+++.||+|+++.... .....+.+|+.++++++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~---- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAV---- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC----
Confidence 467999999999999999999874 2578899999864432 334678899999999999999999998643
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCch-----------hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEecc
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKD-----------VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCD 804 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-----------~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 804 (988)
++..++||||+++++|.+++......... .......+++.+++.++.|++.||+|||+. +++|||
T Consensus 80 -~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 80 -GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred -CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 46789999999999999999754321000 001113578899999999999999999998 999999
Q ss_pred CCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCC
Q 001974 805 LKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPT 883 (988)
Q Consensus 805 lkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~ 883 (988)
|||+||++++++.++|+|||.+.......... .......+..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~ 233 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADYYK--ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPY 233 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCcccc--ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999987543322111 1112235678999999998899999999999999999998 88887
Q ss_pred CccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHH
Q 001974 884 DVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITN 963 (988)
Q Consensus 884 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 963 (988)
..... ...... ..+.. ....+..++.++.+++.+||+.||++|||+.|
T Consensus 234 ~~~~~-----~~~~~~--------~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 234 YGMAH-----EEVIYY--------VRDGN-------------------VLSCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred CCCCH-----HHHHHH--------HhcCC-------------------CCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 52211 011100 00000 00112246778999999999999999999999
Q ss_pred HHHHHHH
Q 001974 964 VVHELQS 970 (988)
Q Consensus 964 vl~~L~~ 970 (988)
+++.|++
T Consensus 282 l~~~l~~ 288 (288)
T cd05050 282 INRILQR 288 (288)
T ss_pred HHHHhhC
Confidence 9998863
No 250
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-34 Score=320.89 Aligned_cols=271 Identities=23% Similarity=0.412 Sum_probs=206.5
Q ss_pred hCCCCCCceeccccceeEEEEEECC-------CCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQ-------DGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSI 732 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~-------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 732 (988)
..+|++.+.||+|+||.||+|++.. .+..||+|.++... ....+.+.+|+++++++ +||||++++++|..
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 89 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-
Confidence 3468999999999999999998642 22368999886432 23346789999999999 89999999999643
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCCch-----hhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCC
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQKD-----VEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKP 807 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-----~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 807 (988)
++..++||||+++|+|.+++......... .......+++.++..++.|++.||+|||+. +++||||||
T Consensus 90 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp 162 (334)
T cd05100 90 ----DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAA 162 (334)
T ss_pred ----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceecccccc
Confidence 46789999999999999999754321100 011224688999999999999999999998 999999999
Q ss_pred CCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCcc
Q 001974 808 GNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVM 886 (988)
Q Consensus 808 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~ 886 (988)
+||++++++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 240 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYYK--KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 240 (334)
T ss_pred ceEEEcCCCcEEECCcccceecccccccc--cccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999998654322111 1112234568999999999999999999999999999998 88887532
Q ss_pred ccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 887 FEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.......... . . .....+..++.++.+++.+||+.+|++|||+.|+++
T Consensus 241 -----~~~~~~~~~~-~-------~-------------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 241 -----PVEELFKLLK-E-------G-------------------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred -----CHHHHHHHHH-c-------C-------------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 1111111100 0 0 000112356678999999999999999999999999
Q ss_pred HHHHHHHH
Q 001974 967 ELQSVKNA 974 (988)
Q Consensus 967 ~L~~i~~~ 974 (988)
.|+++...
T Consensus 289 ~l~~~~~~ 296 (334)
T cd05100 289 DLDRVLTV 296 (334)
T ss_pred HHHHHhhh
Confidence 99998754
No 251
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.1e-34 Score=321.75 Aligned_cols=284 Identities=18% Similarity=0.213 Sum_probs=198.3
Q ss_pred CCceeccc--cceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 667 STHLIGMG--SFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 667 ~~~~lg~G--~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
+.++||+| +|++||++..+.+|+.||+|+++... ....+.+.+|+++++.++||||+++++++.. ++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-----~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-----DNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----CCEEEE
Confidence 46789999 68899999999999999999987542 2334567789999999999999999999643 478899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++|+|.+++..... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++++|
T Consensus 77 v~e~~~~~~l~~~~~~~~~---------~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~ 144 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFM---------DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSG 144 (327)
T ss_pred EEeccCCCcHHHHHHhhcc---------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcc
Confidence 9999999999999865321 2578999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccc---cceeccccccccccccCcccCC--CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 823 FGLARVRQEVSNL---TQSCSVGVRGTIGYAAPEYGLG--SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 823 fG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
|+.+......... .........++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~ 219 (327)
T cd08227 145 LRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ-----ML 219 (327)
T ss_pred cchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH-----HH
Confidence 9875433211110 0001112346788999999876 468899999999999999999999997432111 01
Q ss_pred HHHHhhhhhhhhcccc------------c-cC--cchhhhhh---HHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC
Q 001974 898 RTALLDHVIDIVDPIL------------I-ND--VEDWDATN---KQRLRQAKINGKIECPISMVRIGVACSVESPQDRM 959 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l------------~-~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 959 (988)
.......+....+... . .+ ..++.... ...............++++.+++.+||+.||++||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp 299 (327)
T cd08227 220 LEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARP 299 (327)
T ss_pred HHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcC
Confidence 0111111110000000 0 00 00000000 00000000011223567899999999999999999
Q ss_pred CHHHHHHH--HHHHH
Q 001974 960 SITNVVHE--LQSVK 972 (988)
Q Consensus 960 s~~evl~~--L~~i~ 972 (988)
|++|+++. +++++
T Consensus 300 t~~ell~~p~f~~~~ 314 (327)
T cd08227 300 SASTLLNHSFFKQIK 314 (327)
T ss_pred CHHHHhcChhhhhcc
Confidence 99999873 44443
No 252
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.5e-35 Score=324.27 Aligned_cols=256 Identities=21% Similarity=0.245 Sum_probs=196.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||+||+|++..+++.||+|++... .......+.+|+.++..++|++|+++++++ .+++.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 4799999999999999999999989999999998642 222335578899999999999999999985 34588
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~----------~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~k 142 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE----------DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIR 142 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEE
Confidence 999999999999999997532 2578889999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC-----CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-----SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
|+|||++.......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ..
T Consensus 143 l~DfG~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~ 214 (331)
T cd05624 143 LADFGSCLKMNQDGTVQ---SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES-----LV 214 (331)
T ss_pred EEeccceeeccCCCcee---eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCC-----HH
Confidence 99999997654322111 122458999999999875 467889999999999999999999986321 11
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCC--CCCHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQD--RMSITNVVHE 967 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 967 (988)
.......... ... ........++.++.+++.+|+..++++ |++++++++.
T Consensus 215 ~~~~~i~~~~------~~~-----------------~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 215 ETYGKIMNHE------ERF-----------------QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred HHHHHHHcCC------Ccc-----------------cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 1110000000 000 000111245678899999999876654 4688888754
No 253
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.1e-34 Score=311.60 Aligned_cols=249 Identities=24% Similarity=0.312 Sum_probs=201.9
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|++.+.||.|++|.||+|++..+++.||+|++.... ......+.+|+++++.++|+||+++++++. ++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEE
Confidence 46888999999999999999999899999999987543 334567889999999999999999999854 347899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|+||+++++|.+++... ++++..+..++.|++.|+.|||+. +++||||+|+||++++++.++|+
T Consensus 76 ~v~e~~~~~~L~~~~~~~------------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~ 140 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG------------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLA 140 (274)
T ss_pred EEEEeeCCCcHHHHHhhc------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEc
Confidence 999999999999998643 578899999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.++....... ......++..|+|||++.+..++.++||||||+++|||+||+.||...... ...
T Consensus 141 d~g~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~---- 207 (274)
T cd06609 141 DFGVSGQLTSTMS----KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVL---- 207 (274)
T ss_pred ccccceeeccccc----ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHH----
Confidence 9999987654321 122345788999999999888999999999999999999999998632110 000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccc-hhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIE-CPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
..+.....+ ..... ++.++.+++.+||..||++|||++++++.
T Consensus 208 -~~~~~~~~~----------------------~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 208 -FLIPKNNPP----------------------SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -HHhhhcCCC----------------------CCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 000000000 00111 56678999999999999999999999763
No 254
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2.4e-34 Score=307.88 Aligned_cols=250 Identities=24% Similarity=0.331 Sum_probs=201.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|+||.||++....+|+.||+|.+.... ....+++.+|+.++++++||||+++++++ ...+..+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 5888999999999999999999899999999986432 23346789999999999999999999985 4457899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~ 143 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRG---------VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLG 143 (256)
T ss_pred EEEecCCCCcHHHHHHhccC---------CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEe
Confidence 99999999999999865432 2578889999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.+......... .....|+..|+|||+..+..++.++|||||||++|+|++|+.||... ..........
T Consensus 144 d~~~~~~~~~~~~~----~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~ 214 (256)
T cd08218 144 DFGIARVLNSTVEL----ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKII 214 (256)
T ss_pred eccceeecCcchhh----hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHh
Confidence 99999765432211 11234788999999999888999999999999999999999998631 1111111100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. +. ....+...+.++.+++.+||+.+|++||++.||++
T Consensus 215 ~------------~~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 215 R------------GS---------------YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred c------------CC---------------CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 00 00112346678999999999999999999999986
No 255
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.7e-36 Score=322.85 Aligned_cols=248 Identities=21% Similarity=0.345 Sum_probs=196.8
Q ss_pred CCceeccccceeEEEEEECCCCeEEEEEEee----ccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 667 STHLIGMGSFGSVYKGAFDQDGTIVAIKVFN----LQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 667 ~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~----~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
...+||+|+|-+||+|.+..+|..||--.++ .......++|..|+.+|+.++||||+++|+++.+. .....-+
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~---~n~~in~ 120 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT---DNKTINF 120 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC---CCceeee
Confidence 4468999999999999998888888743332 22334457899999999999999999999997654 2356789
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-CCcEEEe
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN-DMIAHVG 821 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~ 821 (988)
|+|.+..|+|+.|.++.+ +++...++.|++||++||.|||++ .|+|||||||-+||||+. .|.|||+
T Consensus 121 iTEL~TSGtLr~Y~kk~~-----------~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIG 188 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHR-----------RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIG 188 (632)
T ss_pred eeecccCCcHHHHHHHhc-----------cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeec
Confidence 999999999999998765 688889999999999999999997 679999999999999975 5899999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|+|+|+....... ..++|||.|||||... ..|+..+||||||+++.||+|+..||...... .+..++..
T Consensus 189 DLGLAtl~r~s~a------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~----AQIYKKV~ 257 (632)
T KOG0584|consen 189 DLGLATLLRKSHA------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP----AQIYKKVT 257 (632)
T ss_pred chhHHHHhhcccc------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH----HHHHHHHH
Confidence 9999997655332 2367999999999876 78999999999999999999999998754222 12222221
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
...-.+.+.+ --.++++++|.+|+.. .++|||+.|+++.
T Consensus 258 SGiKP~sl~k--------------------------V~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 258 SGIKPAALSK--------------------------VKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred cCCCHHHhhc--------------------------cCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 1110000000 1124689999999999 9999999999863
No 256
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=306.45 Aligned_cols=262 Identities=24% Similarity=0.308 Sum_probs=209.9
Q ss_pred hccccCHHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEE
Q 001974 649 ALQKVSYESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKV 725 (988)
Q Consensus 649 ~~~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~ 725 (988)
..+....+-.....+.|+.-++||+||||.||-++.+.+|+.+|.|.+... .........+|-.++.+++.+.||.+
T Consensus 171 FlQWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsl 250 (591)
T KOG0986|consen 171 FLQWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSL 250 (591)
T ss_pred HHHHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEE
Confidence 334444444444567789999999999999999999999999999988533 22334567899999999999999998
Q ss_pred EeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccC
Q 001974 726 ITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDL 805 (988)
Q Consensus 726 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 805 (988)
-.+ |+..+..|+|+..|.||+|.-+|...+. ..+++..++.+|.+|+.||++||.. +||.||+
T Consensus 251 aYA-----feTkd~LClVLtlMNGGDLkfHiyn~g~---------~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDL 313 (591)
T KOG0986|consen 251 AYA-----FETKDALCLVLTLMNGGDLKFHIYNHGN---------PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDL 313 (591)
T ss_pred eee-----ecCCCceEEEEEeecCCceeEEeeccCC---------CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccC
Confidence 766 5566999999999999999999987664 3689999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 806 KPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 806 kp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
||+|||+|+.|+++|+|.|+|..+....... +.+||.+|||||++.+..|+...|.||+||++|||+.|+.||..
T Consensus 314 KPeNILLDd~GhvRISDLGLAvei~~g~~~~-----~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 314 KPENILLDDHGHVRISDLGLAVEIPEGKPIR-----GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred ChhheeeccCCCeEeeccceEEecCCCCccc-----cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 9999999999999999999999776654332 34799999999999999999999999999999999999999863
Q ss_pred cccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH
Q 001974 886 MFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI 961 (988)
Q Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 961 (988)
-.+. ...+ -+|.+...+.. ..+...+++..++....|+.||++|-..
T Consensus 389 ~KeK----------vk~e----Evdrr~~~~~~---------------ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 389 RKEK----------VKRE----EVDRRTLEDPE---------------EYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hhhh----------hhHH----HHHHHHhcchh---------------hcccccCHHHHHHHHHHHccCHHHhccC
Confidence 2111 1111 11222222221 2233566788999999999999999643
No 257
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7.8e-35 Score=323.40 Aligned_cols=256 Identities=20% Similarity=0.227 Sum_probs=196.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.++||+|+||+||+++.+.+++.||+|++... .......+..|+.++..++|++|+++++++. +++.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ-----DENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cCCE
Confidence 4789999999999999999999989999999998632 1223345788999999999999999999854 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~----------~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~k 142 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE----------DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIR 142 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEE
Confidence 999999999999999997533 2578889999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
|+|||++......... ......||+.|+|||++. ...++.++|||||||++|||++|+.||... ...
T Consensus 143 L~DfG~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-----~~~ 214 (332)
T cd05623 143 LADFGSCLKLMEDGTV---QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-----SLV 214 (332)
T ss_pred EeecchheecccCCcc---eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC-----CHH
Confidence 9999998754332211 112245899999999986 346789999999999999999999998632 111
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCC--CCCHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQD--RMSITNVVHE 967 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 967 (988)
.......... . . .........++.++.+++.+|+..+|++ |++++|+++.
T Consensus 215 ~~~~~i~~~~--------~-----~----------~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 215 ETYGKIMNHK--------E-----R----------FQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHhCCC--------c-----c----------ccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 1111100000 0 0 0000111246778899999988665444 6899999876
No 258
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-36 Score=320.56 Aligned_cols=251 Identities=23% Similarity=0.334 Sum_probs=203.1
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
-|+++..||.|+||.||+|+.+.++-..|.|++.....+..++++-|++|+..+.||+||++++.+. .++..+|+
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy-----~enkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYY-----FENKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHh-----ccCceEEE
Confidence 3566788999999999999999888888999998888888899999999999999999999999843 45889999
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDF 823 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 823 (988)
.|||.||..+..+-.-. +.+++.++..+++|++.||.|||+. +|||||||+.|||++-+|.++|+||
T Consensus 108 iEFC~GGAVDaimlEL~----------r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADF 174 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELG----------RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADF 174 (1187)
T ss_pred EeecCCchHhHHHHHhc----------cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecc
Confidence 99999999998886654 4799999999999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 824 GLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 824 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|.+....... .....+.||++|||||+.+ ..+|+.++||||||++|.||..+.+|...... ....-
T Consensus 175 GVSAKn~~t~----qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-----MRVll 245 (1187)
T KOG0579|consen 175 GVSAKNKSTR----QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLL 245 (1187)
T ss_pred cccccchhHH----hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-----HHHHH
Confidence 9886533321 1223467999999999864 46899999999999999999999999653211 11110
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. +... +|..... +......+.+++.+|+..+|..||+++++++
T Consensus 246 K-----iaKS-ePPTLlq-------------------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 246 K-----IAKS-EPPTLLQ-------------------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred H-----Hhhc-CCCcccC-------------------cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 0 0000 1111111 2234456889999999999999999999874
No 259
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.4e-34 Score=307.90 Aligned_cols=253 Identities=25% Similarity=0.442 Sum_probs=199.5
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
..+|++.+.||+|+||.||+|.+. .++.+|+|.++... ....++.+|++++++++|||++++++++. .....+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCT-----ERSPIC 75 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEc-----cCCceE
Confidence 356888999999999999999885 57789999886432 23467899999999999999999999854 346789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++.... ..+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~ 142 (256)
T cd05112 76 LVFEFMEHGCLSDYLRAQR----------GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVS 142 (256)
T ss_pred EEEEcCCCCcHHHHHHhCc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEEC
Confidence 9999999999999986543 2578899999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||.++....... .......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .....
T Consensus 143 d~g~~~~~~~~~~---~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~-- 212 (256)
T cd05112 143 DFGMTRFVLDDQY---TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVE-- 212 (256)
T ss_pred CCcceeecccCcc---cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHH--
Confidence 9999875433211 11112335678999999998899999999999999999998 9999863211 01110
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
.+.+. .....+...+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 213 ---~~~~~----------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 213 ---TINAG----------------------FRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---HHhCC----------------------CCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 00000 000011234677999999999999999999999998873
No 260
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-34 Score=327.28 Aligned_cols=274 Identities=21% Similarity=0.208 Sum_probs=197.5
Q ss_pred hCCCCCCceeccccceeEEEEEEC--CCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFD--QDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
..+|++.+.||+|+||.||+|... ..++.||+|.+... +...+|++++++++||||+++++++. ....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~-----~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYR-----WKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEe-----eCCE
Confidence 357999999999999999999764 34678999987532 34568999999999999999998853 4478
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++|||++ +++|.+++... ..+++.+++.++.||+.||+|||+. +||||||||+|||++.++.+|
T Consensus 161 ~~lv~e~~-~~~l~~~l~~~-----------~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~ 225 (392)
T PHA03207 161 VCMVMPKY-KCDLFTYVDRS-----------GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAV 225 (392)
T ss_pred EEEEehhc-CCCHHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEE
Confidence 89999999 57888888433 3689999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCC--cchHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGD--LNLHNYA 897 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~--~~~~~~~ 897 (988)
|+|||+++........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+....
T Consensus 226 l~DfG~a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~ 303 (392)
T PHA03207 226 LGDFGAACKLDAHPDT--PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSII 303 (392)
T ss_pred EccCccccccCccccc--ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHH
Confidence 9999999765443221 11224569999999999999999999999999999999999999986432211 0011110
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHh-------hhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLR-------QAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
. .......+. ................. .+........+.++.+++.+||..||++|||+.|++..
T Consensus 304 ~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 304 R-CMQVHPLEF----PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred H-HhccCcccc----CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 000000000 00000000000000000 00000012345678899999999999999999999875
No 261
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.8e-34 Score=308.31 Aligned_cols=247 Identities=28% Similarity=0.504 Sum_probs=197.3
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
++|++.+.||+|+||.||++.. +++.||+|.++... ..+.+.+|+.++++++|||++++++++.. +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEE
Confidence 4688999999999999999975 78889999986432 34678899999999999999999998642 34689
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|
T Consensus 76 v~e~~~~~~L~~~l~~~~~---------~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~D 143 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR---------ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSD 143 (254)
T ss_pred EEECCCCCCHHHHHHhcCc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECC
Confidence 9999999999999975432 2578889999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.+....... .....+..|+|||++.+..++.++|||||||++|||++ |+.||.... .......
T Consensus 144 fg~~~~~~~~~-------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~-- 209 (254)
T cd05083 144 FGLARVGSMGV-------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----LKEVKEC-- 209 (254)
T ss_pred CccceeccccC-------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHH--
Confidence 99987543211 11234578999999988899999999999999999998 999986321 1111000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
+ .... .......++.++.+++.+||+.+|++||+++++++.|++
T Consensus 210 ---~----~~~~------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 210 ---V----EKGY------------------RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ---H----hCCC------------------CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 0000 001122467789999999999999999999999998763
No 262
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.8e-34 Score=307.94 Aligned_cols=255 Identities=27% Similarity=0.481 Sum_probs=201.6
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
..++|++.+.||+|+||.||+|.+. .+..||+|.++... ...+.+.+|++++++++|+||+++++++. . ...
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~-~~~ 75 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-----K-EPI 75 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEc-----C-CCe
Confidence 4568999999999999999999875 66779999886432 23467889999999999999999998853 2 567
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l 143 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEG---------SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKI 143 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCc---------cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEE
Confidence 999999999999999975432 2578889999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||.+........ .......++..|+|||++....++.++|||||||++|+++| |+.||...... ....
T Consensus 144 ~d~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~-----~~~~- 214 (260)
T cd05073 144 ADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIR- 214 (260)
T ss_pred CCCcceeeccCCCc---ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH-----HHHH-
Confidence 99999976543211 11122345678999999998889999999999999999999 99998632110 0000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQS 970 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 970 (988)
.+... .........+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 215 ~~~~~--------------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 215 ALERG--------------------------YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHhCC--------------------------CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00000 0001123466789999999999999999999999999875
No 263
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8.7e-35 Score=316.46 Aligned_cols=270 Identities=24% Similarity=0.319 Sum_probs=196.9
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|+..+.||+|+||.||+|++..+|+.||+|+++... ......+.+|++++++++||||+++++++ .+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCceE
Confidence 4888899999999999999999899999999986432 22335678899999999999999999984 4457899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|+||++ ++|.+++.... ..+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 76 lv~e~~~-~~l~~~~~~~~----------~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~ 141 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCN----------GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLA 141 (284)
T ss_pred EEEecCC-CCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEEC
Confidence 9999995 68888775432 2589999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||+++....... ......++..|+|||++.+. .++.++|||||||++|||+||..|+.........+... ...
T Consensus 142 dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~-~~~ 216 (284)
T cd07839 142 DFGLARAFGIPVR----CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI-FRL 216 (284)
T ss_pred ccchhhccCCCCC----CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHH-HHH
Confidence 9999975433211 11223578899999998764 46899999999999999999998864321111111000 000
Q ss_pred Hhhh-------hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 901 LLDH-------VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 901 ~~~~-------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.... +....+.. ....+.. ...........+.++.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~---~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 217 LGTPTEESWPGVSKLPDYK---PYPMYPA------TTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hCCCChHHhHHhhhccccc---ccCCCCC------cchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000 00000000 0000000 00001112346678899999999999999999999975
No 264
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.3e-34 Score=322.15 Aligned_cols=288 Identities=20% Similarity=0.246 Sum_probs=205.0
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.++|++.+.||+|+||.||+|....+|+.||+|++.... ....+.+.+|+.++++++||||+++++++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 478999999999999999999999899999999986432 233466788999999999999999998865432 34467
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+ +++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+|
T Consensus 83 ~~lv~e~~-~~~l~~~~~~~~-----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~k 147 (334)
T cd07855 83 VYVVMDLM-ESDLHHIIHSDQ-----------PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELR 147 (334)
T ss_pred EEEEEehh-hhhHHHHhccCC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEE
Confidence 89999999 579999886543 589999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||++..................++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .......
T Consensus 148 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~ 225 (334)
T cd07855 148 IGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLIL 225 (334)
T ss_pred ecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHH
Confidence 99999997654332222222223468899999998765 56889999999999999999999998632110 0111111
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
........+..+.............................+.++.+++.+||+.+|++||++++++..
T Consensus 226 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 226 SVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred HHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 111111111111000000000000000000000000112457889999999999999999999998874
No 265
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.6e-34 Score=309.93 Aligned_cols=256 Identities=21% Similarity=0.337 Sum_probs=200.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc------chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH------GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
+|+..+.||+|++|.||+|....+++.||+|++..... ...+.+.+|++++++++|+||+++++++. .+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC-----ED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-----cC
Confidence 47888999999999999999988999999999864331 23467889999999999999999999954 45
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC-
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM- 816 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~- 816 (988)
+..++||||+++++|.+++.... ++++..+..++.|++.||+|||+. +++||||+|+||+++.++
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~ 141 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG-----------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQ 141 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCC
Confidence 78899999999999999986432 578899999999999999999998 999999999999998776
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
.+||+|||.+..................++..|+|||.+.+..++.++||||+|+++|+|++|..||...... .....
T Consensus 142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~ 219 (268)
T cd06630 142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLAL 219 (268)
T ss_pred EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHH
Confidence 6999999999766443211111222345789999999998888999999999999999999999998632111 00000
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. ...... .....+...++++.+++.+|+..+|++||++.|+++
T Consensus 220 ~~--------~~~~~~------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 220 IF--------KIASAT------------------TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HH--------HHhccC------------------CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00 000000 000112245677899999999999999999999975
No 266
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.1e-34 Score=307.64 Aligned_cols=254 Identities=22% Similarity=0.251 Sum_probs=196.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-----cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-----HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
++|++.+.||+|+||.||.|.+..+++.||+|.+.... ....+.+.+|+.++++++||||+++++++... ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence 57889999999999999999998899999999885322 12245788899999999999999999985432 23
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||+++++|.+++.... .+++..+.+++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~ 144 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG-----------ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGN 144 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCC
Confidence 56789999999999999986432 478888999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
++|+|||.++........ ........++..|+|||.+.+..++.++|||||||++|||++|+.||.... .....
T Consensus 145 ~~l~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~~~- 218 (265)
T cd06652 145 VKLGDFGASKRLQTICLS-GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE----AMAAI- 218 (265)
T ss_pred EEECcCcccccccccccc-ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc----hHHHH-
Confidence 999999999865332111 111122458889999999988889999999999999999999999986320 00000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... ...... ...+...+..+.+++.+|+. +|++||+++|+++
T Consensus 219 ~~~----~~~~~~----------------------~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 219 FKI----ATQPTN----------------------PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred HHH----hcCCCC----------------------CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 000 000000 01122345568899999995 9999999999875
No 267
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=5.6e-34 Score=307.30 Aligned_cols=257 Identities=21% Similarity=0.336 Sum_probs=189.5
Q ss_pred ceeccccceeEEEEEEC--CCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 669 HLIGMGSFGSVYKGAFD--QDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~--~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
+.||+|+||.||+|.+. .++..+|+|.++.... .....+.+|+.++++++||||+++++++.. ....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE-----VTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-----CCCcEEEEE
Confidence 46899999999999874 2446799998865432 233578889999999999999999998644 367899999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
|+++|+|.+++........ ...++..+..++.|++.|++|||+. +++||||||+||+++.++++||+|||.
T Consensus 76 ~~~~g~L~~~l~~~~~~~~------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~ 146 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAEL------MTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGL 146 (269)
T ss_pred CCCCCcHHHHHHHhhhccc------ccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccc
Confidence 9999999999865432110 2456778889999999999999998 999999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCCC-------CCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHH
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-------EVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 897 (988)
++........ .......++..|+|||++.+. .++.++||||||+++|||++ |+.||......+ . .
T Consensus 147 ~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~---~ 219 (269)
T cd05087 147 SHNKYKEDYY--VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--V---L 219 (269)
T ss_pred cccccCccee--ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--H---H
Confidence 9754322211 111224477889999987642 35789999999999999997 999986432111 0 0
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
............++ ......+..+.+++.+|| .+|++|||++||++.|+
T Consensus 220 ~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 220 TYTVREQQLKLPKP----------------------RLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHHhhcccCCCCCC----------------------ccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00000000000000 111234566889999999 68999999999998874
No 268
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=4e-34 Score=306.21 Aligned_cols=249 Identities=21% Similarity=0.355 Sum_probs=199.8
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|+..+.||+|+||.||+|....+++.||+|++.... ....+.+.+|++++++++|||++++++.+ ..++..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 5888999999999999999998899999999986432 23456788999999999999999999884 3457899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC-CcEEE
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND-MIAHV 820 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kL 820 (988)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +++||||+|+||+++++ +.+||
T Consensus 76 lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l 143 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCN---------SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKI 143 (256)
T ss_pred EEEecCCCCCHHHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEE
Confidence 99999999999999975431 2578999999999999999999998 99999999999999855 46899
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||.+........ .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ........
T Consensus 144 ~d~~~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~~~~ 213 (256)
T cd08220 144 GDFGISKILSSKSK-----AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN-----LPALVLKI 213 (256)
T ss_pred ccCCCceecCCCcc-----ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc-----hHHHHHHH
Confidence 99999986543221 122457889999999998889999999999999999999999986321 11111100
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. ......+..++.++.+++.+||+.+|++|||+.|+++
T Consensus 214 ~~---------------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 214 MS---------------------------GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred Hh---------------------------cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00 0000112245677999999999999999999999986
No 269
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=290.55 Aligned_cols=258 Identities=22% Similarity=0.285 Sum_probs=204.5
Q ss_pred hhCCCCCC-ceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCC
Q 001974 661 ATDGFSST-HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 661 ~~~~y~~~-~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 738 (988)
.+++|.+. ++||-|-.|.|..+.++.+|+.+|+|++.. ....++|++.--.. .|||||.+++++... +.+..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENS-YQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCce
Confidence 35566554 579999999999999999999999999852 24556788765544 799999999998765 77788
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC---C
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN---D 815 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~ 815 (988)
...+|||.|+||.|...+...+. +.+++.++-.|++||+.|+.|||+. +|.||||||+|+|.+. +
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~---------~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~n 200 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD---------QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPN 200 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc---------ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCC
Confidence 88999999999999999987764 5799999999999999999999999 9999999999999965 4
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
-.+||+|||+|+.........+ ...|+.|.|||++...+|+...|+||+||++|-|++|.+||...... .+..
T Consensus 201 a~lKLtDfGFAK~t~~~~~L~T-----Pc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--aisp 273 (400)
T KOG0604|consen 201 APLKLTDFGFAKETQEPGDLMT-----PCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISP 273 (400)
T ss_pred cceEecccccccccCCCccccC-----CcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--cCCh
Confidence 4799999999997665443333 34799999999999999999999999999999999999998643221 1111
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
-.+..+...-.+ -..++|+ .++++..++|+.+|..+|.+|.|+.|+++
T Consensus 274 gMk~rI~~gqy~-------FP~pEWs----------------~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 274 GMKRRIRTGQYE-------FPEPEWS----------------CVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHHhHhhccCcc-------CCChhHh----------------HHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 111111111111 1112332 46677899999999999999999999875
No 270
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.6e-34 Score=307.99 Aligned_cols=257 Identities=22% Similarity=0.299 Sum_probs=188.3
Q ss_pred ceeccccceeEEEEEECC--CCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 669 HLIGMGSFGSVYKGAFDQ--DGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
+.||+|+||.||+|.... ....+|+|.+..... .....+.+|+..++.++||||+++++++.. ....++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~-----~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE-----SIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-----CCceEEEEE
Confidence 368999999999997632 345788888754332 234568899999999999999999998643 477899999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
|+++|+|.+++........ ...++..+..++.||+.|++|||+. +|+||||||+||++++++++||+|||+
T Consensus 76 ~~~~g~L~~~l~~~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 146 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVA------QMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGL 146 (269)
T ss_pred eCCCCcHHHHHHhcccccc------ccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEecccc
Confidence 9999999999976542111 2356778899999999999999998 999999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCC-------CCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHH
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-------SEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 897 (988)
++.......... .....++..|+|||++.. ..++.++|||||||++|||++ |..||....+. ...
T Consensus 147 ~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~~ 219 (269)
T cd05042 147 ALEQYPEDYYIT--KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-----QVL 219 (269)
T ss_pred ccccccchheec--cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-----HHH
Confidence 875332211111 122346778999998643 456889999999999999999 78887632111 000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
............+ ......++..+.+++..|| .||++|||++||++.|.
T Consensus 220 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 220 KQVVREQDIKLPK----------------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HHHhhccCccCCC----------------------CcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1111110000000 0112346677889999999 59999999999998873
No 271
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.5e-34 Score=316.99 Aligned_cols=205 Identities=24% Similarity=0.314 Sum_probs=161.7
Q ss_pred ceeccccceeEEEEEECC--CCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEee
Q 001974 669 HLIGMGSFGSVYKGAFDQ--DGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEF 746 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 746 (988)
.+||+|+||.||+|+... +++.||+|.++... ....+.+|++++++++||||+++++++.. ..+...++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEee
Confidence 689999999999999753 55789999886432 33567899999999999999999998653 234678999999
Q ss_pred ccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee----CCCCcEEEee
Q 001974 747 MTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL----DNDMIAHVGD 822 (988)
Q Consensus 747 ~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~D 822 (988)
+ +++|.+++......... .....+++..++.++.||+.||+|||+. +|+||||||+||++ ++++.+||+|
T Consensus 82 ~-~~~l~~~~~~~~~~~~~--~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~D 155 (317)
T cd07867 82 A-EHDLWHIIKFHRASKAN--KKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIAD 155 (317)
T ss_pred e-CCcHHHHHHhhhccccC--CCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEee
Confidence 9 46888777533211100 0113588999999999999999999998 99999999999999 5667999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
||+++........ ........||..|+|||++.+ ..++.++|||||||++|||+||++||..
T Consensus 156 fG~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 156 MGFARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccceeccCCCccc-ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9999865432211 111223468999999999876 4578999999999999999999999864
No 272
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=9.8e-35 Score=310.99 Aligned_cols=241 Identities=21% Similarity=0.335 Sum_probs=187.7
Q ss_pred ceeccccceeEEEEEECCCCe-------EEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGT-------IVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~-------~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+.||+|+||.||+|.....+. .||+|.+........+.+.+|+.+++.++||||+++++++.. ++..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 468999999999999865443 488888865544555678899999999999999999999643 46789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc----
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI---- 817 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~---- 817 (988)
+||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 76 lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~ 142 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK----------NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTG 142 (258)
T ss_pred EEEecCCCCcHHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccC
Confidence 9999999999999997654 2578889999999999999999998 9999999999999987765
Q ss_pred ----EEEeeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCC-CCCCccccCCc
Q 001974 818 ----AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGK-KPTDVMFEGDL 891 (988)
Q Consensus 818 ----~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~-~p~~~~~~~~~ 891 (988)
++++|||.+...... ....++..|+|||++.+. .++.++|||||||++|||++|. .||.....
T Consensus 143 ~~~~~~l~d~g~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~--- 211 (258)
T cd05078 143 NPPFIKLSDPGISITVLPK--------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS--- 211 (258)
T ss_pred CCceEEecccccccccCCc--------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH---
Confidence 699999988654321 123478899999998874 5789999999999999999985 55432100
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
..... .. . .....+.....++.+++.+||+.||++|||++++++.|+
T Consensus 212 --~~~~~------~~---~--------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 212 --QKKLQ------FY---E--------------------DRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred --HHHHH------HH---H--------------------ccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00000 00 0 000111233456899999999999999999999999863
No 273
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.1e-34 Score=312.09 Aligned_cols=248 Identities=24% Similarity=0.311 Sum_probs=199.3
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
.|+..+.||+|+||.||+|.+..+++.||+|.++... ....+.+.+|++++++++||||+++++++. .+...++
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 79 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-----KGTKLWI 79 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-----cCCceEE
Confidence 4666788999999999999998889999999986433 334467889999999999999999999854 4578999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|
T Consensus 80 v~e~~~~~~L~~~~~~~------------~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~d 144 (277)
T cd06642 80 IMEYLGGGSALDLLKPG------------PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLAD 144 (277)
T ss_pred EEEccCCCcHHHHhhcC------------CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcc
Confidence 99999999999998542 578889999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
||++........ ......++..|+|||++.+..++.++|||||||++|||++|+.||....... . .
T Consensus 145 fg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~---~----- 210 (277)
T cd06642 145 FGVAGQLTDTQI----KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--V---L----- 210 (277)
T ss_pred ccccccccCcch----hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--H---H-----
Confidence 999976543221 1112357889999999999889999999999999999999999976321110 0 0
Q ss_pred hhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 903 DHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 903 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
..+ .... .......++.++.+++.+||+.+|++||++.|+++.
T Consensus 211 ~~~----~~~~------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 211 FLI----PKNS------------------PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred hhh----hcCC------------------CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 000 0000 001112456778999999999999999999999984
No 274
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.9e-34 Score=303.84 Aligned_cols=248 Identities=28% Similarity=0.469 Sum_probs=196.2
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
++||+|+||.||+|.+.. ++.||+|.++..... ..+.+.+|++++++++|+||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcC
Confidence 478999999999999976 999999998754433 4567899999999999999999999854 347889999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++++|.+++.... ..+++..+..++.+++.|++|||+. +++||||+|+||+++.++.+||+|||.+.
T Consensus 75 ~~~~l~~~l~~~~----------~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~ 141 (251)
T cd05041 75 PGGSLLTFLRKKK----------NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSR 141 (251)
T ss_pred CCCcHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccc
Confidence 9999999986543 2578889999999999999999998 99999999999999999999999999997
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVI 906 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (988)
........ .......++..|+|||.+.+..++.++|||||||++|||+| |..||...... ... ..+
T Consensus 142 ~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~-----~~~-----~~~- 208 (251)
T cd05041 142 EEEGGIYT--VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ-----QTR-----ERI- 208 (251)
T ss_pred cccCCcce--eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH-----HHH-----HHH-
Confidence 65421111 11111224567999999988899999999999999999999 88887532111 000 000
Q ss_pred hhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 907 DIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 907 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
... .....+...+.++.+++.+||..+|++|||+.|+++.|+
T Consensus 209 ---~~~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 209 ---ESG------------------YRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ---hcC------------------CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 000 000112346778999999999999999999999999886
No 275
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.8e-35 Score=323.50 Aligned_cols=241 Identities=24% Similarity=0.287 Sum_probs=184.2
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhc---CCCCceEEEeecccccccCCCceEEEE
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNI---RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
||+|+||+||+|++..+++.||+|++..... .....+..|..++... +||||+++++++ ..++..++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 6999999999999998999999999864321 1223455666676655 699999999884 4457899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 e~~~~g~L~~~l~~~~-----------~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 76 DYMSGGELFWHLQKEG-----------RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred cCCCCChHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCC
Confidence 9999999998886543 688999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
+++....... ......||..|+|||++.+. .++.++||||+||++|||++|+.||... ............
T Consensus 142 ~a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~-----~~~~~~~~i~~~ 212 (330)
T cd05586 142 LSKANLTDNK----TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-----DTQQMYRNIAFG 212 (330)
T ss_pred cCcCCCCCCC----CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCC-----CHHHHHHHHHcC
Confidence 9875322211 11234589999999998764 4789999999999999999999998632 111111100000
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC----HHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS----ITNVVH 966 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 966 (988)
. ..+ .....+.++.+++.+||+.||++||+ +.|+++
T Consensus 213 ~------~~~---------------------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 213 K------VRF---------------------PKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred C------CCC---------------------CCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0 000 01134667899999999999999985 555544
No 276
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7.2e-34 Score=305.76 Aligned_cols=255 Identities=26% Similarity=0.383 Sum_probs=201.9
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc--hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG--ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|...+.||+|+||.||+|....+++.||+|+++..... ..+.+..|+.++++++|+||+++++++. ..+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV-----HREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----cCCEEE
Confidence 588899999999999999999889999999999755443 5678999999999999999999999853 447889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.+||+
T Consensus 76 lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~ 141 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGR-----------ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLG 141 (264)
T ss_pred EEEecCCCCcHHHHHhhcC-----------CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEc
Confidence 9999999999999987542 478888999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCC---CCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSE---VSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|||.+..................++..|+|||++.+.. ++.++||||||+++||+++|+.||...... .. ...
T Consensus 142 d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~---~~-~~~ 217 (264)
T cd06626 142 DFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE---FQ-IMF 217 (264)
T ss_pred ccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch---HH-HHH
Confidence 99999876543322111112345788999999988766 889999999999999999999998632110 00 000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. +.....+. ......++..+.+++.+||+.+|++||++.|++.
T Consensus 218 ~-----~~~~~~~~--------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 218 H-----VGAGHKPP--------------------IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred H-----HhcCCCCC--------------------CCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 00000000 0011234677899999999999999999999874
No 277
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.4e-34 Score=309.57 Aligned_cols=254 Identities=24% Similarity=0.335 Sum_probs=202.7
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|+..+.||+|++|.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. +...+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-----NGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-----CCEEE
Confidence 46888899999999999999999899999999987543 2344678899999999999999999998543 47899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHH-HCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
+|+||+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++||||||+||++++++.++|
T Consensus 76 lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l 142 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ----------GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKL 142 (265)
T ss_pred EEEEecCCCcHHHHHHHcc----------CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEE
Confidence 9999999999999987543 267888999999999999999999 7 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||.+......... ...++..|+|||.+.+..++.++||||||+++|+|++|+.||.................
T Consensus 143 ~d~g~~~~~~~~~~~------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 216 (265)
T cd06605 143 CDFGVSGQLVNSLAK------TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYI 216 (265)
T ss_pred eecccchhhHHHHhh------cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHH
Confidence 999998755332111 14578899999999999999999999999999999999999864322111111111111
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccc-hhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIE-CPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
... .....+.. ++.++.+++.+||..||++|||+.|+++.
T Consensus 217 ~~~---------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 217 VNE---------------------------PPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred hcC---------------------------CCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 000 00001111 56779999999999999999999999753
No 278
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.9e-34 Score=309.07 Aligned_cols=249 Identities=24% Similarity=0.317 Sum_probs=200.9
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
..|+..+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+.++++++||||+++++++. ++...+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCEEE
Confidence 35778899999999999999998889999999987443 334567889999999999999999999864 347899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++... ++++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++
T Consensus 79 lv~e~~~~~~L~~~i~~~------------~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~ 143 (277)
T cd06640 79 IIMEYLGGGSALDLLRAG------------PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLA 143 (277)
T ss_pred EEEecCCCCcHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEc
Confidence 999999999999998642 477888999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++........ ......++..|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 144 dfg~~~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~---- 210 (277)
T cd06640 144 DFGVAGQLTDTQI----KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-----VL---- 210 (277)
T ss_pred ccccceeccCCcc----ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-----Hh----
Confidence 9999976543221 1122357889999999988889999999999999999999999986321110 00
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
...... . .......++..+.+++.+||+.+|++||+++|+++.
T Consensus 211 -----~~~~~~---~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 211 -----FLIPKN---N---------------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred -----hhhhcC---C---------------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 000000 0 001122456778999999999999999999999776
No 279
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.8e-34 Score=312.49 Aligned_cols=280 Identities=25% Similarity=0.362 Sum_probs=197.2
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++++|.+.+.||+|+||.||+|....+++.||+|+++.... .....+.+|+.+++.++|+||+++++++. .++.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----TKET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----cCCe
Confidence 45789999999999999999999988999999999864432 23356789999999999999999999854 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+. +++.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~----------~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 143 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHP----------GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELK 143 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEE
Confidence 899999994 77777765432 2467888899999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||+++........ .....++..|+|||++.+. .++.++|||||||++|||++|+.||+........+... .
T Consensus 144 l~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~-~ 218 (291)
T cd07870 144 LADFGLARAKSIPSQT----YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKI-W 218 (291)
T ss_pred EeccccccccCCCCCC----CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHH-H
Confidence 9999999754322111 1123478899999998764 57889999999999999999999987432110000000 0
Q ss_pred HHHhhhhhhhhc--cccccCcchhh-hhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVD--PILINDVEDWD-ATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d--~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
............ .........+. ........ ........+..+.+++.+|+..||++|||+.|++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 219 TVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLR--VVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHcCCCChhhhhhhhhcccccchhccccCCcchh--hhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000 00000000000 00000000 00111123567899999999999999999999874
No 280
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6e-34 Score=305.20 Aligned_cols=248 Identities=25% Similarity=0.324 Sum_probs=199.4
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-----cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-----HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
+|+..+.||+|++|.||+|....+++.||+|.+.... ....+.+.+|+++++.++|+||+++++++. .+.
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-----EED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-----cCC
Confidence 4778899999999999999998889999999986433 124467889999999999999999999854 447
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++|+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~ 141 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG-----------SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVV 141 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCE
Confidence 8899999999999999986542 578889999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCC-CCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSE-VSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||.+....... ......++..|+|||.+.... ++.++|+|||||++|+|++|+.||...... ...
T Consensus 142 kl~d~~~~~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~-----~~~ 211 (258)
T cd06632 142 KLADFGMAKQVVEFS-----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV-----AAV 211 (258)
T ss_pred EEccCccceeccccc-----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH-----HHH
Confidence 999999987654322 122345889999999987766 899999999999999999999998643210 000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
...... ......+..++..+.+++.+||+.+|++||++.++++
T Consensus 212 ~~~~~~--------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 212 FKIGRS--------------------------KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHhc--------------------------ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 000000 0000112245677899999999999999999999975
No 281
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.7e-34 Score=311.38 Aligned_cols=245 Identities=25% Similarity=0.322 Sum_probs=199.2
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++. .++.
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQ-----DDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEE-----cCCe
Confidence 46889999999999999999999899999999986432 233467889999999999999999999853 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+|
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~-----------~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~k 141 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG-----------RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIK 141 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEE
Confidence 999999999999999986543 688999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||++...... .....+++.|+|||.+.+...+.++||||||+++|+|++|+.||.... .......
T Consensus 142 l~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~ 209 (290)
T cd05580 142 ITDFGFAKRVKGR-------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEK 209 (290)
T ss_pred EeeCCCccccCCC-------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHH
Confidence 9999999865432 122358899999999988888999999999999999999999986321 0000000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVH 966 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 966 (988)
+ . ......+...+..+.+++.+||+.||++|| +++|+++
T Consensus 210 -----~---~--------------------~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 210 -----I---L--------------------EGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -----H---h--------------------cCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 0 0 000111223467789999999999999998 6677663
No 282
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.5e-34 Score=312.79 Aligned_cols=201 Identities=28% Similarity=0.455 Sum_probs=168.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.++|++.+.||+|++|.||+|..+.+++.||+|.+..... .....+.+|++++++++|+||+++++++. .++..
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 78 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIH-----TKKTL 78 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEe-----cCCeE
Confidence 3679999999999999999999988999999999864332 23355778999999999999999999854 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++ ++|.+++.... ..+++..++.++.|+++||+|||+. +|+||||||+||++++++.+||
T Consensus 79 ~lv~e~~~-~~L~~~~~~~~----------~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 144 (291)
T cd07844 79 TLVFEYLD-TDLKQYMDDCG----------GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKL 144 (291)
T ss_pred EEEEecCC-CCHHHHHHhCC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEE
Confidence 99999996 59999886543 2578899999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
+|||.++....... ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||..
T Consensus 145 ~dfg~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 206 (291)
T cd07844 145 ADFGLARAKSVPSK----TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPG 206 (291)
T ss_pred CccccccccCCCCc----cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999875432111 1112246789999998875 4578999999999999999999999864
No 283
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=7.1e-34 Score=305.90 Aligned_cols=253 Identities=24% Similarity=0.331 Sum_probs=198.3
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc------chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH------GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
+|++.+.||+|+||.||+|... +++.+|+|.++.... .....+.+|++++++++|+||+++++++.. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD-----D 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec-----C
Confidence 4788999999999999999874 788999998864321 123568889999999999999999999643 4
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..++||||+++++|.+++.... ++++..+..++.|++.||+|||+. +|+|+||+|+||++++++.
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~ 140 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFG-----------PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGI 140 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCe
Confidence 78999999999999999986542 578889999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccc--cceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 818 AHVGDFGLARVRQEVSNL--TQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
++|+|||.+......... .........++..|+|||++.+..++.++|||||||++|+|++|+.||...... ..
T Consensus 141 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~ 216 (265)
T cd06631 141 IKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL----AA 216 (265)
T ss_pred EEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH----HH
Confidence 999999999764321111 111122345889999999999888999999999999999999999998632110 00
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.... .. .. ......+..++.++.+++.+||+.+|++||++.|+++
T Consensus 217 ~~~~--~~--~~----------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 217 MFYI--GA--HR----------------------GLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred HHHh--hh--cc----------------------CCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 00 00 0000112346677899999999999999999999875
No 284
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=2e-34 Score=314.08 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=198.4
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
|.....||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++|+||+++++.+. .++..++||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~lv~ 98 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWVVM 98 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEEEE
Confidence 444577999999999999998889999999987655555677899999999999999999999854 447889999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|.+++... .+++.++..++.||+.|++|||+. +|+||||||+||++++++.++|+|||
T Consensus 99 e~~~~~~L~~~~~~~------------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg 163 (292)
T cd06658 99 EFLEGGALTDIVTHT------------RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFG 163 (292)
T ss_pred eCCCCCcHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCc
Confidence 999999999988532 478889999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
++........ ......|+..|+|||...+..++.++||||||+++|||++|+.||..... . .... .
T Consensus 164 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~----~-~~~~-----~ 229 (292)
T cd06658 164 FCAQVSKEVP----KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP----L-QAMR-----R 229 (292)
T ss_pred chhhcccccc----cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----H-HHHH-----H
Confidence 9875432211 11224588999999999888899999999999999999999999863110 0 0000 0
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.....+.. ......+..+.+++.+||..||++|||++|+++.
T Consensus 230 ~~~~~~~~~--------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 230 IRDNLPPRV--------------------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHhcCCCcc--------------------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 000000000 0112345678999999999999999999999874
No 285
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.8e-34 Score=309.01 Aligned_cols=263 Identities=20% Similarity=0.360 Sum_probs=202.6
Q ss_pred CCCCCCceeccccceeEEEEEECC-----CCeEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeecccccccC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQ-----DGTIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 736 (988)
++|+..+.||+|+||.||+|+.+. +.+.||+|.+...... ..+.+.+|++++++++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCRE----- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECC-----
Confidence 578899999999999999999753 3467999988654433 45679999999999999999999998643
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
.+..++||||+++++|.+++......... .....+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~--~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~ 154 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEK--LKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQR 154 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhccccccc--ccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCC
Confidence 46789999999999999999755421100 0012589999999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 895 (988)
.++++|||++........ .......++..|+|||.+.+..++.++||||||+++|++++ |..||...... .
T Consensus 155 ~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-----~ 226 (275)
T cd05046 155 EVKVSLLSLSKDVYNSEY---YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-----E 226 (275)
T ss_pred cEEEcccccccccCcccc---cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-----H
Confidence 999999999874432211 11122346778999999988888999999999999999999 88887532110 1
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
......... . ....+..++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 227 ~~~~~~~~~--------~------------------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 227 VLNRLQAGK--------L------------------ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHcCC--------c------------------CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111000000 0 00112356778999999999999999999999999875
No 286
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2e-34 Score=314.00 Aligned_cols=268 Identities=25% Similarity=0.361 Sum_probs=199.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+++++.++||||+++++++. .++..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR-----RKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc-----cCCeE
Confidence 468899999999999999999988899999999864322 23467889999999999999999999854 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++++++.++..... .+++.+++.++.||+.||+|||+. +++||||+|+||++++++.++|
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l 141 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN-----------GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKL 141 (286)
T ss_pred EEEEecCCccHHHHHHhccC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEE
Confidence 99999999999988765432 578999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||++........ ......++..|+|||++.+ ..++.++||||||+++|||++|++||.... ....+...
T Consensus 142 ~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~----~~~~~~~~ 213 (286)
T cd07846 142 CDFGFARTLAAPGE----VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS----DIDQLYHI 213 (286)
T ss_pred EeeeeeeeccCCcc----ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc----hHHHHHHH
Confidence 99999876533221 1122457889999999875 457889999999999999999999985321 11111110
Q ss_pred H--Hh---hhhhhhhc------cccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 A--LL---DHVIDIVD------PILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~--~~---~~~~~~~d------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. .. .......+ ......... ..........++..+.+++.+||+.+|++||+++++++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 214 IKCLGNLIPRHQEIFQKNPLFAGMRLPEVKE---------IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HHHhCCCchhhHHHhccchHhhccccccccC---------cchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0 00 00000000 000000000 00000112356788999999999999999999999875
No 287
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=8.5e-34 Score=305.17 Aligned_cols=253 Identities=26% Similarity=0.375 Sum_probs=205.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|++.+.||+|++|.||+|++..+++.||+|++..... ...+.+.+|+.++.+++|+|++++++++. .++..+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEE
Confidence 368899999999999999999998899999999875543 44578999999999999999999999854 348899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHc-CCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHH-HCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
+||||+++++|.+++... ..+++..++.++.|+++|++|||+ . +++||||+|+||+++.++.++|
T Consensus 76 lv~e~~~~~~L~~~l~~~-----------~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l 141 (264)
T cd06623 76 IVLEYMDGGSLADLLKKV-----------GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKI 141 (264)
T ss_pred EEEEecCCCcHHHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEE
Confidence 999999999999999654 268899999999999999999999 8 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||.+.......... ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... .........
T Consensus 142 ~df~~~~~~~~~~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~ 215 (264)
T cd06623 142 ADFGISKVLENTLDQC----NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAI 215 (264)
T ss_pred ccCccceecccCCCcc----cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHH
Confidence 9999998654322211 1235788999999999999999999999999999999999998643220 111111100
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccc-hhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIE-CPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
. . ......... ++..+.+++.+||+.+|++||++.|+++.
T Consensus 216 ~--------~-------------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 216 C--------D-------------------GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred h--------c-------------------CCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0 000111223 67789999999999999999999999874
No 288
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.6e-34 Score=308.42 Aligned_cols=265 Identities=22% Similarity=0.280 Sum_probs=202.2
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|+..+.||.|++|.||+|.+..+++.||+|++..... .....+.+|++++++++||||+++++++... .++..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCeEE
Confidence 468889999999999999999988999999999874432 3456789999999999999999999987532 345789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~ 147 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKR-------GGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLC 147 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhc-------CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEe
Confidence 999999999999886532110 13578889999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++........ ....++..|+|||.+.+..++.++||||+||++|+|++|+.||+...............
T Consensus 148 dfg~~~~~~~~~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-- 219 (287)
T cd06621 148 DFGVSGELVNSLA------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSY-- 219 (287)
T ss_pred ecccccccccccc------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHH--
Confidence 9999875432211 12347889999999999899999999999999999999999987432211111111100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.....+.+... .......++.+.+++.+||+.+|++|||+.|+++.
T Consensus 220 ---~~~~~~~~~~~~----------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 220 ---IVNMPNPELKDE----------------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ---HhcCCchhhccC----------------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 000000000000 00011345678999999999999999999999873
No 289
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6e-34 Score=312.87 Aligned_cols=259 Identities=22% Similarity=0.272 Sum_probs=199.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+++++.++||||+++++.+. .++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE-----TKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe-----cCCE
Confidence 46889999999999999999999899999999986443 223456789999999999999999999854 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~-----------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~ 141 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG-----------ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIK 141 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEE
Confidence 899999999999999996543 578899999999999999999998 999999999999999999999
Q ss_pred Eeeeccccccccccc-----------ccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCcccc
Q 001974 820 VGDFGLARVRQEVSN-----------LTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFE 888 (988)
Q Consensus 820 L~DfG~a~~~~~~~~-----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~ 888 (988)
|+|||+++....... ..........++..|+|||.+.+..++.++|||||||++||+++|..||...
T Consensus 142 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~-- 219 (305)
T cd05609 142 LTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-- 219 (305)
T ss_pred EeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--
Confidence 999999864211100 0001111235788999999998888999999999999999999999998521
Q ss_pred CCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 889 GDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
.............. .. ......++.++.+++.+||+.||++||++.++.+.+
T Consensus 220 ---~~~~~~~~~~~~~~---~~----------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 220 ---TPEELFGQVISDDI---EW----------------------PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred ---CHHHHHHHHHhccc---CC----------------------CCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 11111110000000 00 001114677799999999999999999976555554
Q ss_pred HH
Q 001974 969 QS 970 (988)
Q Consensus 969 ~~ 970 (988)
+.
T Consensus 272 ~~ 273 (305)
T cd05609 272 QH 273 (305)
T ss_pred hC
Confidence 43
No 290
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.7e-34 Score=303.97 Aligned_cols=252 Identities=26% Similarity=0.504 Sum_probs=200.6
Q ss_pred CCCCceeccccceeEEEEEECCCC----eEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDG----TIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
+++.+.||+|+||.||+|++...+ ..||+|+++..... ..+.+..|+++++.++|+||+++++++.. .+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-----EEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-----CCe
Confidence 456789999999999999997665 88999999755433 56789999999999999999999998643 378
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.+++|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~ 143 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRP---------KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVK 143 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhh---------ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEE
Confidence 8999999999999999875431 1289999999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||.+............ ...++..|+|||.+.+..++.++||||+|+++|+|++ |..||... .......
T Consensus 144 l~dfg~~~~~~~~~~~~~~---~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-----~~~~~~~ 215 (258)
T smart00219 144 ISDFGLSRDLYDDDYYKKK---GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-----SNEEVLE 215 (258)
T ss_pred EcccCCceecccccccccc---cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHH
Confidence 9999999866543221111 1236789999999988889999999999999999998 88887531 1011110
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
..... .....+..++.++.+++.+|+..||++|||+.|+++.|
T Consensus 216 ~~~~~---------------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 216 YLKKG---------------------------YRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHhcC---------------------------CCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 00000 00111224677899999999999999999999998764
No 291
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.3e-34 Score=314.67 Aligned_cols=256 Identities=24% Similarity=0.322 Sum_probs=200.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc---hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG---ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|+..+.||+|++|.||+|....+++.||+|.+...... ..+.+..|+++++.++|+||+++++.+. .++.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ-----TETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee-----cCCE
Confidence 4688899999999999999999888999999999754322 3457889999999999999999999853 4578
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~---------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~ 143 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPG---------KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIM 143 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCC---------CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEE
Confidence 9999999999999999875431 3688899999999999999999998 999999999999999999999
Q ss_pred Eeeecccccccccccccc-------------------------eeccccccccccccCcccCCCCCCCccchHHHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQ-------------------------SCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLL 874 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ 874 (988)
|+|||++........... .......|+..|+|||++.+..++.++||||||+++|
T Consensus 144 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~ 223 (316)
T cd05574 144 LSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLY 223 (316)
T ss_pred EeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHH
Confidence 999999875433211100 0111245888999999999988999999999999999
Q ss_pred HHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcC
Q 001974 875 EMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVES 954 (988)
Q Consensus 875 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 954 (988)
+|++|+.||...... ..+ ..+.+... ........+.++.+++.+||+.|
T Consensus 224 ~l~~g~~pf~~~~~~----~~~---------~~~~~~~~------------------~~~~~~~~~~~~~~li~~~l~~~ 272 (316)
T cd05574 224 EMLYGTTPFKGSNRD----ETF---------SNILKKEV------------------TFPGSPPVSSSARDLIRKLLVKD 272 (316)
T ss_pred HHhhCCCCCCCCchH----HHH---------HHHhcCCc------------------cCCCccccCHHHHHHHHHHccCC
Confidence 999999998632111 000 00000000 00111125778999999999999
Q ss_pred CCCCCC----HHHHHH
Q 001974 955 PQDRMS----ITNVVH 966 (988)
Q Consensus 955 P~~RPs----~~evl~ 966 (988)
|++||| ++|+++
T Consensus 273 p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 273 PSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HhHCCCchhhHHHHHc
Confidence 999999 666665
No 292
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.7e-34 Score=310.04 Aligned_cols=262 Identities=21% Similarity=0.304 Sum_probs=203.4
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeecccccc-cCC
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDF-QGN 737 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~-~~~ 737 (988)
.++++|++.+.||+|++|.||+|.++.+++.|++|++..... ..+.+.+|+.+++++ .|+||+++++++..... ..+
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 356889999999999999999999988899999999875433 346789999999999 79999999999765422 235
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +++||||+|+||++++++.
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~ 151 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKK-------GKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAE 151 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCe
Confidence 6689999999999999988643210 13688999999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCC-----CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-----SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLN 892 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 892 (988)
+||+|||.+........ ......|+..|+|||++.. ..++.++|||||||++|+|++|+.||......
T Consensus 152 ~~l~d~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--- 224 (275)
T cd06608 152 VKLVDFGVSAQLDSTLG----RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--- 224 (275)
T ss_pred EEECCCccceecccchh----hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---
Confidence 99999999875433221 1122458899999998754 34678999999999999999999998632110
Q ss_pred hHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... .+ +.....+ ........+.++.+++.+||..||++|||+.|+++
T Consensus 225 --~~~----~~-~~~~~~~--------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 225 --RAL----FK-IPRNPPP--------------------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred --HHH----HH-hhccCCC--------------------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 000 00 0000000 00111235667899999999999999999999976
No 293
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7.1e-34 Score=305.93 Aligned_cols=255 Identities=23% Similarity=0.291 Sum_probs=202.4
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||.|+||.||+|.+..+++.||+|+++... ....+.+..|++++++++||||+++++++.. ..+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 4888999999999999999999899999999986432 2334578889999999999999999987543 2346679
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHH-----cCCCCCeEeccCCCCCeeeCCCC
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLH-----HHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-----~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
++|||+++++|.+++...... ..++++..++.++.||+.||+||| +. +++||||+|+||++++++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~-------~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~ 147 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKE-------RKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANN 147 (265)
T ss_pred EEehhccCCCHHHHHHHHhhc-------ccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCC
Confidence 999999999999998653211 136899999999999999999999 66 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
.+||+|||++......... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ....
T Consensus 148 ~~kl~d~g~~~~~~~~~~~----~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~ 218 (265)
T cd08217 148 NVKLGDFGLAKILGHDSSF----AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQL 218 (265)
T ss_pred CEEEecccccccccCCccc----ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHH
Confidence 9999999999876543211 122458899999999999889999999999999999999999986321 1111
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. .+.. .. ....+...+..+.+++.+|++.+|++||++.+|++.
T Consensus 219 ~~-----~~~~---~~-------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 219 AS-----KIKE---GK-------------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HH-----HHhc---CC-------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 10 0000 00 001122456789999999999999999999999863
No 294
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.7e-34 Score=312.82 Aligned_cols=249 Identities=23% Similarity=0.322 Sum_probs=198.7
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
|+....||+|+||.||+|....+++.||+|++........+.+.+|+.+++.++|||++++++++. .++..++||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEEEE
Confidence 444568999999999999998889999999997655555677889999999999999999999854 347899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|.+++.. ..+++.+++.++.|++.||+|||+. +++||||+|+||+++.++.+||+|||
T Consensus 98 e~~~~~~L~~~~~~------------~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 98 EFLQGGALTDIVSQ------------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred ecCCCCCHHHHHhh------------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeech
Confidence 99999999988743 2578899999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
++........ ......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ... ...
T Consensus 163 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~-~~~----- 228 (297)
T cd06659 163 FCAQISKDVP----KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP----VQA-MKR----- 228 (297)
T ss_pred hHhhcccccc----cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHH-HHH-----
Confidence 9875433211 11224588999999999988899999999999999999999999863211 000 000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+..... .........+..+.+++.+||+.+|++||+++|+++.
T Consensus 229 ~~~~~~--------------------~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 229 LRDSPP--------------------PKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HhccCC--------------------CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000 0001112456678999999999999999999999985
No 295
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.2e-33 Score=305.54 Aligned_cols=265 Identities=22% Similarity=0.383 Sum_probs=199.9
Q ss_pred CCCCceeccccceeEEEEEECC---CCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeeccccccc-CCC
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQ---DGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ-GND 738 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~~~ 738 (988)
|.+.+.||+|+||.||+|.+.. +++.||+|+++... ....+++.+|++++++++||||+++++++...... ...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5678899999999999998643 56899999986432 23456788999999999999999999986543111 112
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++++||+++|+|.+++........ ...+++..++.++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 152 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEE-----PFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTV 152 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCC-----CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCE
Confidence 34789999999999988753321111 02578889999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||.++.......... .....++..|++||.+....++.++|||||||++|||++ |++||..... ....
T Consensus 153 kl~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-----~~~~ 225 (273)
T cd05074 153 CVADFGLSKKIYSGDYYRQ--GCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-----SEIY 225 (273)
T ss_pred EECcccccccccCCcceec--CCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-----HHHH
Confidence 9999999986543221111 112235678999999998889999999999999999999 8888753211 0000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
. .+.. . .....+...+..+.+++.+||+.+|++|||+.|+++.|+++
T Consensus 226 ~-----~~~~---~-------------------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 226 N-----YLIK---G-------------------NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred H-----HHHc---C-------------------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 0000 0 00011224667899999999999999999999999999876
No 296
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.5e-34 Score=306.99 Aligned_cols=254 Identities=23% Similarity=0.302 Sum_probs=193.9
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEee--ccccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFN--LQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 738 (988)
...|++.+.||+||.+.||++... +.+.||+|.+. ..+.....-|.+|+..|.++ .|.+|+++++|- ..++
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v~d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----VTDG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----ccCc
Confidence 346899999999999999999885 55667777654 22334456799999999999 699999999994 3468
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..|+||||- ..+|..+++.... .+....++.+..|++.|+.++|.+ ||||.||||.|+++- .|.+
T Consensus 434 ~lYmvmE~G-d~DL~kiL~k~~~----------~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~L 498 (677)
T KOG0596|consen 434 YLYMVMECG-DIDLNKILKKKKS----------IDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRL 498 (677)
T ss_pred eEEEEeecc-cccHHHHHHhccC----------CCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeE
Confidence 999999997 7899999987653 223237888999999999999999 999999999999987 4799
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCC-----------CCCCccchHHHHHHHHHHHhCCCCCCccc
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-----------EVSTNGDIYSYGILLLEMVTGKKPTDVMF 887 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDvwslG~vl~elltg~~p~~~~~ 887 (988)
||+|||+|....... +.......+||+.||+||.+... +.+.++||||+||++|+|+.|+.||....
T Consensus 499 KLIDFGIA~aI~~DT--TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~ 576 (677)
T KOG0596|consen 499 KLIDFGIANAIQPDT--TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII 576 (677)
T ss_pred EeeeechhcccCccc--cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence 999999998765532 22233456899999999987643 25678999999999999999999987421
Q ss_pred cCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 888 EGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
. ....+..+.||.-.-.+.+ ..-..++.++|+.||+.||++|||..|+++.
T Consensus 577 n------------~~aKl~aI~~P~~~Iefp~-----------------~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 577 N------------QIAKLHAITDPNHEIEFPD-----------------IPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred H------------HHHHHHhhcCCCccccccC-----------------CCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 1 1112233333311111110 0112238999999999999999999999853
No 297
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.6e-34 Score=318.12 Aligned_cols=291 Identities=22% Similarity=0.237 Sum_probs=206.5
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.++|.+.+.||+|+||+||+|++..+++.||+|.++.. .......+.+|+.+++.++|+||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 46799999999999999999999989999999998642 2233456778999999999999999999876442233356
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++|+||+ +++|.+++.... ++++..+..++.|++.||.|||+. +++||||||+||+++.++.+|
T Consensus 84 ~~lv~e~~-~~~L~~~~~~~~-----------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~k 148 (337)
T cd07858 84 VYIVYELM-DTDLHQIIRSSQ-----------TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLK 148 (337)
T ss_pred EEEEEeCC-CCCHHHHHhcCC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEE
Confidence 89999999 578988886543 688999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||++........ ......++..|+|||.+.. ..++.++|||||||++|+|++|+.||..... ........
T Consensus 149 L~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~ 222 (337)
T cd07858 149 ICDFGLARTTSEKGD----FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY--VHQLKLIT 222 (337)
T ss_pred ECcCccccccCCCcc----cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHH
Confidence 999999986543221 1122357889999998765 4688999999999999999999999863210 00000011
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH--HHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE--LQSVKN 973 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~~ 973 (988)
........+..+.........+..................+++++.+++.+||+.+|++|||++|+++. ++.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 223 ELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred HHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 000000000000000000000000000000000001123567889999999999999999999999977 655543
No 298
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.7e-35 Score=289.92 Aligned_cols=287 Identities=22% Similarity=0.272 Sum_probs=209.5
Q ss_pred hCCCCCCceeccccceeEEEEEECCCC----eEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDG----TIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~----~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
...|+.+..||+|.||.||+|..+++. +.+|+|.++.+. .+......+|+..++.++|||++.+..++...
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~--- 99 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH--- 99 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc---
Confidence 456899999999999999999664332 368999997442 34457788999999999999999999886542
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
+...++++||.+ -+|...++..+.... +.++...+..|+.||+.|+.|||+. =|+||||||.|||+..+
T Consensus 100 -d~~v~l~fdYAE-hDL~~II~fHr~~~~------~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgd 168 (438)
T KOG0666|consen 100 -DKKVWLLFDYAE-HDLWHIIKFHRASKA------KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGD 168 (438)
T ss_pred -CceEEEEehhhh-hhHHHHHHHhccchh------ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEecc
Confidence 588999999994 689999877654332 4789999999999999999999998 89999999999999877
Q ss_pred ----CcEEEeeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCC
Q 001974 816 ----MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGD 890 (988)
Q Consensus 816 ----~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~ 890 (988)
|.|||+|||+|+.+...-.. -.....++-|..|+|||.+.+. .||.+.||||.||++.||+|-++-|......-
T Consensus 169 gperG~VKIaDlGlaR~~~~plkp-l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~ 247 (438)
T KOG0666|consen 169 GPERGRVKIADLGLARLFNNPLKP-LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKI 247 (438)
T ss_pred CCccCeeEeecccHHHHhhccccc-cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhc
Confidence 89999999999987654321 1123446789999999998885 68999999999999999999998886432210
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHH--------HHhhhhhc---------cccchhHHHHHHhhcccCc
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQ--------RLRQAKIN---------GKIECPISMVRIGVACSVE 953 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~--------~~~~~~~~---------~~~~~~~~l~~li~~cl~~ 953 (988)
.. ..+...+++..++.-...++..+|+..... .++..... ....-++...+|+.+++++
T Consensus 248 ~~----~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~y 323 (438)
T KOG0666|consen 248 KT----KNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTY 323 (438)
T ss_pred cc----CCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhcc
Confidence 00 001122223333333333344444332221 01100000 0011233478999999999
Q ss_pred CCCCCCCHHHHHHH
Q 001974 954 SPQDRMSITNVVHE 967 (988)
Q Consensus 954 dP~~RPs~~evl~~ 967 (988)
||.+|.|+++.++.
T Consensus 324 DP~kRIta~qAleh 337 (438)
T KOG0666|consen 324 DPIKRITAEQALEH 337 (438)
T ss_pred CchhhccHHHHhcc
Confidence 99999999998864
No 299
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8e-34 Score=308.87 Aligned_cols=277 Identities=27% Similarity=0.342 Sum_probs=197.2
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|+..+.||+|++|.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++. +++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH-----TENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----cCCcEE
Confidence 4888999999999999999998899999999986433 223357889999999999999999999854 457899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+. ++|.+++..... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+||+
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~---------~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~ 142 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPL---------SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLA 142 (284)
T ss_pred EEeeccc-cCHHHHHHhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEe
Confidence 9999995 689888865432 3688999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCC-CCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSE-VSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||++......... .....++..|+|||++.+.. ++.++|||||||++|||+||+.||......+ .........
T Consensus 143 dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~ 217 (284)
T cd07860 143 DFGLARAFGVPVRT----YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTL 217 (284)
T ss_pred eccchhhcccCccc----cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHh
Confidence 99998754332111 11234678999999877644 5889999999999999999999986321100 000000000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... .+...+.... ...+...................+.++.+++.+||+.||++|||++|+++
T Consensus 218 -~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 218 -GTP-DEVVWPGVTS-LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred -CCC-ChhhhhhhhH-HHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000 0000000000 00000000000000000011235677899999999999999999999975
No 300
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8.7e-34 Score=309.01 Aligned_cols=278 Identities=23% Similarity=0.289 Sum_probs=201.6
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|+||.||+|.+..+|+.||+|++.... ....+.+.+|+.++++++||||+++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-----HGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCeeE
Confidence 5888999999999999999998899999999997543 334567899999999999999999999854 457889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+ +++|.+++.... ..+++.+++.++.||++||+|||+. +++|+||||+||+++.++.++|+
T Consensus 76 ~v~e~~-~~~L~~~~~~~~----------~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~ 141 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE----------RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIA 141 (286)
T ss_pred EEeccc-CCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEe
Confidence 999999 999999986543 2689999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||.+........ .......++..|+|||.+.+. .++.++||||+|+++|||++|.+||..... ..........
T Consensus 142 dfg~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~ 216 (286)
T cd07832 142 DFGLARLFSEEEP---RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND--IEQLAIVFRT 216 (286)
T ss_pred eeeecccccCCCC---CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH--HHHHHHHHHH
Confidence 9999986544321 111224588999999998654 468999999999999999999887753211 0111111110
Q ss_pred HhhhhhhhhccccccCcchhhhhhH-HHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNK-QRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
........ .+.. .+..+|..... ............+.+.++.+++.+|++.+|++|||++++++.
T Consensus 217 ~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 217 LGTPNEET-WPGL-TSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cCCCChHH-Hhhc-cCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00000000 0000 00000100000 000000001112456789999999999999999999999863
No 301
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7e-34 Score=306.69 Aligned_cols=255 Identities=27% Similarity=0.459 Sum_probs=195.6
Q ss_pred ceeccccceeEEEEEECCCC------eEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 669 HLIGMGSFGSVYKGAFDQDG------TIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~------~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+.||+|+||.||+|++.... +.||+|.+.... ......+.+|+.+++.++||||+++++++.. .+..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL-----NEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC-----CCCeE
Confidence 46899999999999985433 679999885432 2345678899999999999999999998643 46789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC-----
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM----- 816 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----- 816 (988)
+||||+++++|.+++........ ....+++.++..++.|++.|++|||+. +++|+||||+||+++.++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~ 148 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERF----GPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADR 148 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhccc----CCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCc
Confidence 99999999999999965322110 112478899999999999999999998 999999999999999877
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~ 895 (988)
.++++|||++.......... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 149 ~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~ 224 (269)
T cd05044 149 VVKIGDFGLARDIYKSDYYR--KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQ 224 (269)
T ss_pred ceEECCcccccccccccccc--cCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHH
Confidence 89999999997553322111 1112345788999999999999999999999999999998 99998632110 0000
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
. + +. ......+..++..+.+++.+||+.+|++||+++++++.|+
T Consensus 225 ~--------~----~~------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 225 H--------V----TA------------------GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred H--------H----hc------------------CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 0 00 0001112346778999999999999999999999999886
No 302
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.3e-33 Score=304.31 Aligned_cols=261 Identities=25% Similarity=0.335 Sum_probs=204.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
++|++.+.||.|+||+||+|....++..||+|++.... ....+.+.+|+++++.++|+|++++++.+. .++..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence 47899999999999999999998889999999986433 234578899999999999999999998854 457889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+
T Consensus 76 iv~e~~~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~ 144 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP--------RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIA 144 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc--------cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEc
Confidence 99999999999999865321 02578999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||++..................|+..|+|||++... .++.++|||||||++|||++|+.||....... .+.. .
T Consensus 145 df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~----~ 219 (267)
T cd06610 145 DFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLML----T 219 (267)
T ss_pred ccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHH----H
Confidence 9999976654332211122334588999999998876 78999999999999999999999986431110 0000 0
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... ..+..... ......+.++.+++.+||+.||++||+++|+++
T Consensus 220 ~~~-----~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 220 LQN-----DPPSLETG-----------------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred hcC-----CCCCcCCc-----------------cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 00000000 001245678899999999999999999999986
No 303
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=8.3e-34 Score=304.32 Aligned_cols=239 Identities=23% Similarity=0.393 Sum_probs=188.0
Q ss_pred ceeccccceeEEEEEECCCC----------eEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 669 HLIGMGSFGSVYKGAFDQDG----------TIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
+.||+|+||.||+|.+..++ ..|++|++...... ...+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46899999999999997665 35888887644333 6788999999999999999999998643 4
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC--
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM-- 816 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 816 (988)
..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~----------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~ 140 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK----------NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLN 140 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccc
Confidence 5689999999999999987643 2578889999999999999999998 999999999999999888
Q ss_pred -----cEEEeeecccccccccccccceeccccccccccccCcccCCC--CCCCccchHHHHHHHHHHHh-CCCCCCcccc
Q 001974 817 -----IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS--EVSTNGDIYSYGILLLEMVT-GKKPTDVMFE 888 (988)
Q Consensus 817 -----~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~ellt-g~~p~~~~~~ 888 (988)
.+||+|||++...... ....++..|+|||++.+. .++.++|||||||++|||++ |..||.....
T Consensus 141 ~~~~~~~kl~Dfg~a~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~ 212 (259)
T cd05037 141 EGYVPFIKLSDPGIPITVLSR--------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS 212 (259)
T ss_pred cCCceeEEeCCCCcccccccc--------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence 7999999999864331 113467789999998876 78999999999999999999 5777653211
Q ss_pred CCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 889 GDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
. ....... ... ..+......+.+++.+||..+|++|||+.|+++.|
T Consensus 213 ~-----~~~~~~~--------~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 213 S-----EKERFYQ--------DQH---------------------RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred h-----hHHHHHh--------cCC---------------------CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 0000000 000 00011125688999999999999999999999886
Q ss_pred H
Q 001974 969 Q 969 (988)
Q Consensus 969 ~ 969 (988)
+
T Consensus 259 ~ 259 (259)
T cd05037 259 N 259 (259)
T ss_pred C
Confidence 3
No 304
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.9e-33 Score=301.39 Aligned_cols=256 Identities=21% Similarity=0.352 Sum_probs=186.2
Q ss_pred ceeccccceeEEEEEECCC--CeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 669 HLIGMGSFGSVYKGAFDQD--GTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
+.||+|+||.||+|+.... ...+++|.++... ....+.+.+|+.+++.++||||++++++|.. ....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-----AIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-----CCccEEEEe
Confidence 3689999999999986422 2356677765433 2345689999999999999999999998653 467899999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecc
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGL 825 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 825 (988)
|+++|+|.+++....... ...++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 76 ~~~~~~L~~~l~~~~~~~-------~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~ 145 (268)
T cd05086 76 YCELGDLKSYLSQEQWHR-------RNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGI 145 (268)
T ss_pred cCCCCcHHHHHHhhhccc-------ccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEeccccc
Confidence 999999999997543211 2456777889999999999999998 999999999999999999999999999
Q ss_pred cccccccccccceeccccccccccccCcccCC-------CCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHH
Q 001974 826 ARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-------SEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 826 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~ 897 (988)
+........ ........++..|+|||++.. ..++.++|||||||++|||++ |..||..... ....
T Consensus 146 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~ 218 (268)
T cd05086 146 GPSRYKEDY--IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVL 218 (268)
T ss_pred ccccCcchh--hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHH
Confidence 864322111 011123457889999998753 245789999999999999997 5677753211 1111
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
.....+......++. ......+.+.+++..|| .+|++||+++||++.|.
T Consensus 219 ~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 219 NHVIKDQQVKLFKPQ----------------------LELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHhhcccccCCCc----------------------cCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111111111111111 11234566889999999 67999999999998874
No 305
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8e-34 Score=309.67 Aligned_cols=252 Identities=24% Similarity=0.302 Sum_probs=202.7
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.++++++||||+++++++. .++..+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcEE
Confidence 367999999999999999999988889999999987555555677899999999999999999999854 347889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|+||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.+||+
T Consensus 93 lv~e~~~~~~L~~~~~~~------------~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~ 157 (293)
T cd06647 93 VVMEYLAGGSLTDVVTET------------CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLT 157 (293)
T ss_pred EEEecCCCCcHHHHHhhc------------CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEc
Confidence 999999999999998643 467888999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++........ ......+++.|+|||.+.+..++.++|||||||++|++++|+.||......+.
T Consensus 158 dfg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~---------- 223 (293)
T cd06647 158 DFGFCAQITPEQS----KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---------- 223 (293)
T ss_pred cCcceeccccccc----ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh----------
Confidence 9998875443221 11223588899999999888899999999999999999999999864211100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.... .... .........+..+.+++.+||..+|++||++.+++..
T Consensus 224 ---~~~~~----~~~~-------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 224 ---LYLIA----TNGT-------------PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ---eeehh----cCCC-------------CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0000 0001112356678999999999999999999999865
No 306
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.3e-33 Score=304.50 Aligned_cols=256 Identities=25% Similarity=0.387 Sum_probs=198.4
Q ss_pred CCCCCceeccccceeEEEEEECC-CCeEEEEEEeeccc----------cchhHHHHHHHHHHHh-cCCCCceEEEeeccc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQ-DGTIVAIKVFNLQR----------HGASKSFLAECKALKN-IRHRNLVKVITSCSS 731 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~ 731 (988)
+|++.+.||+|+||.||+|.+.. .++.+|+|.+.... .....++.+|+.++.+ ++||||+++++++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~- 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL- 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence 47888999999999999999976 67899999885321 2233557788888875 69999999999854
Q ss_pred ccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCee
Q 001974 732 IDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVL 811 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 811 (988)
.++..++||||+++++|.+++..... ....+++..++.++.|++.||.|||+. .+++||||+|+||+
T Consensus 80 ----~~~~~~lv~e~~~~~~l~~~l~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil 146 (269)
T cd08528 80 ----ENDRLYIVMDLIEGAPLGEHFNSLKE-------KKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIM 146 (269)
T ss_pred ----cCCeEEEEEecCCCCcHHHHHHHHHh-------ccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEE
Confidence 44789999999999999988743211 013688899999999999999999963 28999999999999
Q ss_pred eCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCc
Q 001974 812 LDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDL 891 (988)
Q Consensus 812 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 891 (988)
++.++.+||+|||.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 147 ~~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~----- 216 (269)
T cd08528 147 LGEDDKVTITDFGLAKQKQPES-----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST----- 216 (269)
T ss_pred ECCCCcEEEecccceeeccccc-----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc-----
Confidence 9999999999999998654332 122345889999999999888999999999999999999999998532
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
........ ..+.... ......++.++.+++.+||+.||++||++.|+..+++
T Consensus 217 ~~~~~~~~--------~~~~~~~------------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 217 NMLSLATK--------IVEAVYE------------------PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CHHHHHHH--------HhhccCC------------------cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11111100 0000000 0001135677999999999999999999999998875
No 307
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7.6e-34 Score=308.94 Aligned_cols=254 Identities=21% Similarity=0.288 Sum_probs=192.3
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHH-HHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKA-LKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|++.+.||+|+||.||+|++..+|+.||+|+++.... .....+..|+.. ++..+||||+++++++.. ++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-----~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFR-----EGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEec-----CCcE
Confidence 468899999999999999999998999999999875422 223455566665 555699999999999643 4778
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++ |+|.+++....... ..+++..++.++.||+.|++|||++ .+++||||||+||+++.++.+||
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl 145 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDKG-------LTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKL 145 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccCC-------CCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEE
Confidence 99999995 78887775432111 3689999999999999999999985 28999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC----CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG----SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
+|||.+........ .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... +...
T Consensus 146 ~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~ 217 (283)
T cd06617 146 CDFGISGYLVDSVA-----KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQQL 217 (283)
T ss_pred eecccccccccccc-----cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC---HHHH
Confidence 99999976533211 112357889999998765 45688999999999999999999998632111 1100
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. .. .....+.. ....++.++.+++.+||..+|++||+++++++
T Consensus 218 ~-~~-----~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 218 K-QV-----VEEPSPQL---------------------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred H-HH-----HhcCCCCC---------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 00 00000000 01135678999999999999999999999986
No 308
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.1e-33 Score=303.47 Aligned_cols=256 Identities=22% Similarity=0.382 Sum_probs=197.6
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc----------chhHHHHHHHHHHHhcCCCCceEEEeeccccc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH----------GASKSFLAECKALKNIRHRNLVKVITSCSSID 733 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 733 (988)
+|...+.||+|+||.||+|....+++.||+|.++.... ...+.+..|+.+++.++|||++++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 47788999999999999999988899999998853211 11246788999999999999999999864
Q ss_pred ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC
Q 001974 734 FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD 813 (988)
Q Consensus 734 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 813 (988)
..+..++||||+++++|.+++.... .+++..+..++.||+.||.|||+. +++||||+|+||+++
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~ 142 (272)
T cd06629 79 --TEEYLSIFLEYVPGGSIGSCLRTYG-----------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVD 142 (272)
T ss_pred --cCCceEEEEecCCCCcHHHHHhhcc-----------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEc
Confidence 3478899999999999999987642 578889999999999999999998 999999999999999
Q ss_pred CCCcEEEeeecccccccccccccceeccccccccccccCcccCCCC--CCCccchHHHHHHHHHHHhCCCCCCccccCCc
Q 001974 814 NDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSE--VSTNGDIYSYGILLLEMVTGKKPTDVMFEGDL 891 (988)
Q Consensus 814 ~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 891 (988)
.++.++++|||+++....... ........++..|+|||.+.... ++.++||||||+++||+++|..||.....
T Consensus 143 ~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--- 217 (272)
T cd06629 143 ADGICKISDFGISKKSDDIYD--NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA--- 217 (272)
T ss_pred CCCeEEEeecccccccccccc--ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch---
Confidence 999999999999975432211 11122345789999999987654 78999999999999999999999852211
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
..... +........... ......++.++.+++.+||..||++|||++|+++.
T Consensus 218 -~~~~~---------~~~~~~~~~~~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 218 -IAAMF---------KLGNKRSAPPIP--------------PDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred -HHHHH---------HhhccccCCcCC--------------ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00000 000000000000 01112467789999999999999999999999863
No 309
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.5e-33 Score=307.51 Aligned_cols=266 Identities=20% Similarity=0.227 Sum_probs=188.4
Q ss_pred hCCCCCCceeccccceeEEEEEECCC---CeEEEEEEeeccccchh-----------HHHHHHHHHHHhcCCCCceEEEe
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQD---GTIVAIKVFNLQRHGAS-----------KSFLAECKALKNIRHRNLVKVIT 727 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~---~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~~ 727 (988)
.++|.+.+.||+|+||.||+|++..+ +..+|+|+......... .....+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 46899999999999999999999766 66778886543322111 11223334455678999999998
Q ss_pred ecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCC
Q 001974 728 SCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKP 807 (988)
Q Consensus 728 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp 807 (988)
++... .......++++|++ ..++.+.+.... ..++..+..|+.|++.||+|||+. +|+||||||
T Consensus 91 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp 154 (294)
T PHA02882 91 CGSFK-RCRMYYRFILLEKL-VENTKEIFKRIK-----------CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKP 154 (294)
T ss_pred eeeEe-cCCceEEEEEEehh-ccCHHHHHHhhc-----------cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 75432 11122446788877 446665554321 356778899999999999999998 999999999
Q ss_pred CCeeeCCCCcEEEeeeccccccccccccc---ceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 001974 808 GNVLLDNDMIAHVGDFGLARVRQEVSNLT---QSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTD 884 (988)
Q Consensus 808 ~NIll~~~~~~kL~DfG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~ 884 (988)
+|||++.++.++|+|||+|+......... ........||+.|+|||+..+..++.++|||||||++|||++|+.||.
T Consensus 155 ~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~ 234 (294)
T PHA02882 155 ENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWK 234 (294)
T ss_pred HHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999998654321111 111122459999999999999999999999999999999999999997
Q ss_pred ccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHH
Q 001974 885 VMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNV 964 (988)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 964 (988)
...... .............+ .... .....++..+.+++..||+.+|++||+++++
T Consensus 235 ~~~~~~-~~~~~~~~~~~~~~-----------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l 289 (294)
T PHA02882 235 GFGHNG-NLIHAAKCDFIKRL-----------------------HEGK-IKIKNANKFIYDFIECVTKLSYEEKPDYDAL 289 (294)
T ss_pred ccccch-HHHHHhHHHHHHHh-----------------------hhhh-hccCCCCHHHHHHHHHHHhCCCCCCCCHHHH
Confidence 532211 11111110000000 0000 0123567889999999999999999999999
Q ss_pred HHHH
Q 001974 965 VHEL 968 (988)
Q Consensus 965 l~~L 968 (988)
++.+
T Consensus 290 ~~~~ 293 (294)
T PHA02882 290 IKIF 293 (294)
T ss_pred HHhh
Confidence 9876
No 310
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.8e-33 Score=305.62 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=199.3
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
.|...+.||+|++|.||+|....+++.||+|+++.......+.+.+|+.+++.++||||+++++++. .++..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEE
Confidence 3555689999999999999998899999999987555455567889999999999999999999854 34788999
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDF 823 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 823 (988)
+||+++++|.+++... ++++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+||
T Consensus 95 ~e~~~~~~L~~~~~~~------------~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~ 159 (285)
T cd06648 95 MEFLEGGALTDIVTHT------------RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDF 159 (285)
T ss_pred EeccCCCCHHHHHHhC------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEccc
Confidence 9999999999998652 478889999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhh
Q 001974 824 GLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 824 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
|.+........ ......|+..|+|||...+..++.++|||||||++|||++|+.||.... .......
T Consensus 160 g~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----~~~~~~~---- 226 (285)
T cd06648 160 GFCAQVSKEVP----RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----PLQAMKR---- 226 (285)
T ss_pred ccchhhccCCc----ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHH----
Confidence 98875433211 1122458899999999988889999999999999999999999975311 0011100
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
+.....+ .......++..+.+++.+||+.+|++||++.++++
T Consensus 227 -~~~~~~~--------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 227 -IRDNLPP--------------------KLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -HHhcCCC--------------------CCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0000000 00112236678999999999999999999999986
No 311
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.5e-34 Score=305.39 Aligned_cols=248 Identities=25% Similarity=0.343 Sum_probs=200.5
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .++...
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCCeE
Confidence 4888999999999999999998889999999997432 23457889999999999999999999884 455789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++|+||+++++|.+++.... ++++.++..++.|+++||+|||+. +++|+||+|+||++++++.++|
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l 141 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV-----------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHI 141 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC-----------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEE
Confidence 99999999999999986542 578899999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||.+........ .....|+..|+|||.+.+..++.++||||+|+++|+|++|+.||...... ........
T Consensus 142 ~d~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~ 213 (258)
T cd05578 142 TDFNIATKVTPDTL-----TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAK 213 (258)
T ss_pred eecccccccCCCcc-----ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHH
Confidence 99999886543221 12345788999999999888999999999999999999999998743211 00000000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH--HHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI--TNVV 965 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 965 (988)
.. ......+...+..+.+++.+||+.||.+||++ +|++
T Consensus 214 ~~---------------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 214 QE---------------------------TADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred hc---------------------------cccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 00 01111223466789999999999999999999 5554
No 312
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=344.21 Aligned_cols=257 Identities=26% Similarity=0.352 Sum_probs=205.4
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
.+-++....+||.|.||.||-|....+|+..|+|.++... ....+...+|..++..++|||+|++||+- ...+
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVE-----vHRe 1307 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVE-----VHRE 1307 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCcee-----ecHH
Confidence 3456777889999999999999999999999999987443 33446788999999999999999999983 3457
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..+|.||||++|+|.+.+...+ -.++.....+..|++.|++|||++ |||||||||+||+++.+|.+
T Consensus 1308 kv~IFMEyC~~GsLa~ll~~gr-----------i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~i 1373 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHGR-----------IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLI 1373 (1509)
T ss_pred HHHHHHHHhccCcHHHHHHhcc-----------hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcE
Confidence 8899999999999999997654 355666777999999999999999 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCC---CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS---EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
|++|||.|..................||+.|||||++.+. ....++||||+|||+.||+||+.||...-. +
T Consensus 1374 K~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn---e--- 1447 (1509)
T KOG4645|consen 1374 KYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN---E--- 1447 (1509)
T ss_pred EeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc---h---
Confidence 9999999997766532222333456799999999998874 356789999999999999999999874311 1
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
|..... .-..++++.+.....+-.+++..|+..||++|.++.|+++.
T Consensus 1448 ------------------------~aIMy~-V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1448 ------------------------WAIMYH-VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ------------------------hHHHhH-HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 111111 11122334445577778999999999999999988877653
No 313
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-33 Score=308.84 Aligned_cols=275 Identities=22% Similarity=0.306 Sum_probs=201.2
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|++.+.||+|++|.||+|.+..+++.||+|+++... ....+.+.+|++++++++|+||+++++++.. ++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 36889999999999999999998889999999986432 2334678999999999999999999999643 4789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++++.+..+.... ..+++.++..++.||+.|++|||+. +++||||+|+||++++++.+||
T Consensus 76 ~iv~e~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl 141 (288)
T cd07833 76 YLVFEYVERTLLELLEASP-----------GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKL 141 (288)
T ss_pred EEEEecCCCCHHHHHHhcC-----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEE
Confidence 9999999887776665432 2578999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||.+........ .......++..|+|||++.+. .++.++||||||+++|+|++|+.||...... +.......
T Consensus 142 ~d~g~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~ 216 (288)
T cd07833 142 CDFGFARALRARPA---SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI--DQLYLIQK 216 (288)
T ss_pred EeeecccccCCCcc---ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHH
Confidence 99999986554332 111224578899999999887 8899999999999999999999998632111 00000000
Q ss_pred HHhhhhhh---hh--cccccc-CcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDHVID---IV--DPILIN-DVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~~~~---~~--d~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
........ .. ++.... ...+.. .... .....+..++.++.+++.+||..+|++|||++++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 217 CLGPLPPSHQELFSSNPRFAGVAFPEPS--QPES---LERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HhCCCCHHHhhhcccCccccccccCCCC--CcHH---HHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000 00 000000 000000 0000 000112235788999999999999999999999875
No 314
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=286.65 Aligned_cols=242 Identities=24% Similarity=0.310 Sum_probs=198.1
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
-++|+..++||+|.||.|.+++-+.+|+.+|+|+++.+- ......-..|-++++..+||.+..+-.. |+..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCc
Confidence 367889999999999999999999999999999997542 2333455678899999999999887655 66779
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
+.|+||||+.||.|.-++...+ .+++...+.+...|+.||.|||++ +||.||+|-+|.|+|.+|++
T Consensus 242 rlCFVMeyanGGeLf~HLsrer-----------~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHI 307 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRER-----------VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHI 307 (516)
T ss_pred eEEEEEEEccCceEeeehhhhh-----------cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCce
Confidence 9999999999999998887654 688888999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
||+|||+++..-.. ......+.||+.|.|||++....|+.++|.|.+|||+|||++|+.||.....+ ...
T Consensus 308 KitDFGLCKE~I~~----g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~-----kLF- 377 (516)
T KOG0690|consen 308 KITDFGLCKEEIKY----GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE-----KLF- 377 (516)
T ss_pred Eeeecccchhcccc----cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh-----HHH-
Confidence 99999999743221 12234567999999999999999999999999999999999999998631000 000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM 959 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 959 (988)
+-+-...+..+....++...|+...+.+||.+|.
T Consensus 378 ---------------------------eLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 378 ---------------------------ELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred ---------------------------HHHHhhhccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 0111112233456777889999999999999994
No 315
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=315.79 Aligned_cols=287 Identities=25% Similarity=0.325 Sum_probs=208.4
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeeccccc-ccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSID-FQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~~l 742 (988)
+...+.||+|+||.||+|+++.+|+.||||.++... ....+...+|++++++++|+|||++++.-.+.. .-......+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 455688999999999999999999999999997543 234467789999999999999999998744321 111355789
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC--CCC--cE
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD--NDM--IA 818 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~--~~ 818 (988)
|||||.+|||+..+...... ..+++.+.+.+..+++.||.|||++ +||||||||.||++- ++| ..
T Consensus 95 vmEyC~gGsL~~~L~~PEN~--------~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~Iy 163 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENA--------YGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIY 163 (732)
T ss_pred EEeecCCCcHHHHhcCcccc--------cCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEE
Confidence 99999999999999865432 4699999999999999999999998 999999999999983 334 58
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||.|+..++.... ...+||..|.+||.... +.|+..+|.|||||++||..||..||..............
T Consensus 164 KLtDfG~Arel~d~s~~-----~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~ 238 (732)
T KOG4250|consen 164 KLTDFGAARELDDNSLF-----TSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMW 238 (732)
T ss_pred eeecccccccCCCCCee-----eeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhh
Confidence 99999999988765533 34679999999999984 8889999999999999999999999976544322221111
Q ss_pred HHHHhhh--hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC--CHHHHHHHHHHHHH
Q 001974 898 RTALLDH--VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM--SITNVVHELQSVKN 973 (988)
Q Consensus 898 ~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP--s~~evl~~L~~i~~ 973 (988)
....... +.-..++.. ..+-+|...... +. .........+...+..++..+|++|- ...+....+..|..
T Consensus 239 ~~~tkkp~~v~i~~~~~e-Ngpv~~s~~lP~----p~-~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 239 HIITKKPSGVAIGAQEEE-NGPVEWSSTLPQ----PN-HLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred hhhccCCCceeEeeeccc-CCceeeeccCCC----cc-cccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 1111111 111111111 111222211111 00 00112223456777788889999998 77788777777754
No 316
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.8e-33 Score=307.85 Aligned_cols=248 Identities=25% Similarity=0.330 Sum_probs=194.7
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
.+.|+..+.||+|+||+||+|....+++.||+|++..... ...+++.+|+++++.++||||++++++|.. ++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~~ 88 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-----EH 88 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----CC
Confidence 3568899999999999999999988899999999864322 233568899999999999999999999654 47
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||++ |++.+++.... ..+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+
T Consensus 89 ~~~lv~e~~~-g~l~~~~~~~~----------~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~ 154 (307)
T cd06607 89 TAWLVMEYCL-GSASDILEVHK----------KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTV 154 (307)
T ss_pred eEEEEHHhhC-CCHHHHHHHcc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCE
Confidence 7899999995 67777665332 3588999999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
+|+|||++....... ...++..|+|||++. ...++.++||||||+++|||+||+.||...... .
T Consensus 155 kL~dfg~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~ 221 (307)
T cd06607 155 KLADFGSASLVSPAN--------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----S 221 (307)
T ss_pred EEeecCcceecCCCC--------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----H
Confidence 999999987543221 234788999999874 456889999999999999999999997532100 0
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.... .... .... .....++.++.+++.+||+.+|++||++.+++..
T Consensus 222 ~~~~-~~~~-----------~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 222 ALYH-IAQN-----------DSPT--------------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred HHHH-HhcC-----------CCCC--------------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 0000 0000 0011356678999999999999999999999874
No 317
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.4e-33 Score=302.47 Aligned_cols=248 Identities=24% Similarity=0.321 Sum_probs=199.5
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
-|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|+.++++++||||+++++++. .++..++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEEE
Confidence 4778899999999999999998889999999986432 233467889999999999999999999854 4478999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|
T Consensus 80 v~e~~~~~~l~~~i~~~------------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~d 144 (277)
T cd06641 80 IMEYLGGGSALDLLEPG------------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLAD 144 (277)
T ss_pred EEEeCCCCcHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEee
Confidence 99999999999998642 478899999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
||++........ ......++..|+|||.+.+..++.++|||||||++|+|++|..||...... .....
T Consensus 145 fg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~--- 212 (277)
T cd06641 145 FGVAGQLTDTQI----KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFL--- 212 (277)
T ss_pred cccceecccchh----hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHH---
Confidence 999875543211 112235788999999998888999999999999999999999998632110 00000
Q ss_pred hhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 903 DHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 903 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.. . ........++.++.+++.+||+.+|++||++.++++.
T Consensus 213 --~~~----~------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 213 --IPK----N------------------NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred --Hhc----C------------------CCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000 0 0001122466789999999999999999999999984
No 318
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.5e-33 Score=314.33 Aligned_cols=204 Identities=25% Similarity=0.296 Sum_probs=171.2
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeeccccc-ccC
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSID-FQG 736 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~ 736 (988)
...++|+..+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.++++++||||+++++++.... +.+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3467899999999999999999999989999999998532 2333456778999999999999999999865331 223
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
....++||||+ .++|.+++.. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 93 ~~~~~lv~e~~-~~~l~~~~~~-------------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 93 FQDVYLVMELM-DANLCQVIQM-------------DLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDC 155 (353)
T ss_pred cCcEEEEEecc-CCCHHHHHhh-------------cCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCC
Confidence 35679999999 5688877642 367888999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
.+||+|||.++....... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||..
T Consensus 156 ~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 156 TLKILDFGLARTAGTSFM-----MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred CEEEccCccceeCCCCCC-----CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 999999999986543221 1223578899999999999999999999999999999999999863
No 319
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=280.86 Aligned_cols=253 Identities=21% Similarity=0.312 Sum_probs=196.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++.+.+..||.|+.|.||+++.+.+|...|||.+.... .+..+++...++++.+- ..|.||+.+|+|. .+...
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-----~n~dV 166 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-----TNTDV 166 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-----eCchH
Confidence 34456678999999999999999999999999997443 34456778888887766 4899999999954 34677
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++.||.| ......+++.-. +++++.-+-++...+++||.||.++ .+|+|||+||+|||+|+.|++|+
T Consensus 167 ~IcMelM-s~C~ekLlkrik----------~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKl 233 (391)
T KOG0983|consen 167 FICMELM-STCAEKLLKRIK----------GPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKL 233 (391)
T ss_pred HHHHHHH-HHHHHHHHHHhc----------CCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEe
Confidence 8899998 556666665443 4678888888999999999999987 49999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCC---CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG---SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||||++...-+....+ ...|-+.|||||.+.- ..|+.++||||||++++|+.||+.||.....+ +...
T Consensus 234 CDFGIsGrlvdSkAht-----rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td---Fe~l- 304 (391)
T KOG0983|consen 234 CDFGISGRLVDSKAHT-----RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD---FEVL- 304 (391)
T ss_pred ecccccceeecccccc-----cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc---HHHH-
Confidence 9999998765544333 3458999999998764 46889999999999999999999998743221 1100
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
..+..-..|.+ .......+.+.+++..||++|+.+||...++++.
T Consensus 305 -----tkvln~ePP~L--------------------~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 305 -----TKVLNEEPPLL--------------------PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred -----HHHHhcCCCCC--------------------CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 00111001111 1223466789999999999999999999998753
No 320
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2e-33 Score=307.99 Aligned_cols=272 Identities=22% Similarity=0.286 Sum_probs=198.4
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc-----hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG-----ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
+|+..+.||+|++|.||+|.+..+++.||+|.++..... ....+..|++++++++|+||+++++++. +++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-----HKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-----cCC
Confidence 478889999999999999999888999999999754322 3356778999999999999999999954 357
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+ +++|.+++.... ..+++..+..++.||++||+|||++ +|+||||+|+||+++.++.+
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~----------~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~ 141 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS----------IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVL 141 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCE
Confidence 889999999 999999997543 1588999999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
+|+|||+++........ .....++..|+|||.+.+ ..++.++|||||||++|||++|.+||.... ......
T Consensus 142 ~l~dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~----~~~~~~ 213 (298)
T cd07841 142 KLADFGLARSFGSPNRK----MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS----DIDQLG 213 (298)
T ss_pred EEccceeeeeccCCCcc----ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc----cHHHHH
Confidence 99999999865443211 112346788999998865 467899999999999999999987765321 111111
Q ss_pred HH--HHhhhhhh-hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 898 RT--ALLDHVID-IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 898 ~~--~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. ........ +.+.........+.... ...........+.++.+++.+||+.||++|||++|+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 214 KIFEALGTPTEENWPGVTSLPDYVEFKPFP----PTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred HHHHHcCCCchhhhhhcccccccccccccC----CcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00 00000000 00000000000000000 00000111245677899999999999999999999987
No 321
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.6e-33 Score=309.21 Aligned_cols=286 Identities=22% Similarity=0.293 Sum_probs=199.0
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccc---c
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDF---Q 735 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~ 735 (988)
..++|++.+.||+|+||.||+|....+++.||+|.+..... .....+.+|++++++++||||++++++|..... .
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 34679999999999999999999998999999999864322 223456789999999999999999998765321 1
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.....++||||+. +++.+++.... ..+++.+++.++.||+.||+|||+. +++||||||+||+++.+
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~----------~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~ 155 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKN----------VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKD 155 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCC
Confidence 2345699999994 68888775433 2589999999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
+.+||+|||.+..................++..|+|||.+.+. .++.++||||||+++|||++|+.||...... ...
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~ 233 (310)
T cd07865 156 GILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQL 233 (310)
T ss_pred CcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHH
Confidence 9999999999986543222111112234578899999987664 4788999999999999999999998632110 011
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhh-----hhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWD-----ATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
............++..... ....+. .......... -........+.+++.+||..||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 234 TLISQLCGSITPEVWPGVD--KLELFKKMELPQGQKRKVKER--LKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHHHHHhCCCChhhccccc--chhhhhhccCCCccchhhHHh--cccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 1111100000000000000 000000 0000000000 001113456789999999999999999999975
No 322
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.3e-33 Score=299.47 Aligned_cols=254 Identities=21% Similarity=0.254 Sum_probs=198.6
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc-----ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-----RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
.+|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|++++++++|+||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 5789999999999999999999889999999987532 123345788999999999999999999986432 23
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++|+||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~-----------~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~ 144 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG-----------ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGN 144 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 56789999999999999986542 478888999999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
++|+|||.++........ ........++..|+|||++.+..++.++|||||||++||+++|+.||..... ... .
T Consensus 145 ~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~-~ 218 (264)
T cd06653 145 VKLGDFGASKRIQTICMS-GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAA-I 218 (264)
T ss_pred EEECcccccccccccccc-CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHH-H
Confidence 999999999865332111 1111234588999999999988899999999999999999999999863210 000 0
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
...... ......+...++++.+++.+||. +|..||++.+++.
T Consensus 219 ~~~~~~--------------------------~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 219 FKIATQ--------------------------PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHcC--------------------------CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 000000 00011223466779999999999 5799999998875
No 323
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.3e-34 Score=308.68 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=207.0
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccch--hHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA--SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
....|.+.+.||+|.|+.|.+|++..++..||+|.++...... ...+.+|+++|+.++|||||+++.+. ....
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~t~~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----ETEA 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----eecc
Confidence 4567899999999999999999999999999999997543322 24588999999999999999999994 4458
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..|+||||+.+|.+.+|+...+ ++.+..+..++.|+.+|++|+|++ .|||||||++||+++.+.++
T Consensus 129 ~lylV~eya~~ge~~~yl~~~g-----------r~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mni 194 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHG-----------RMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNI 194 (596)
T ss_pred eeEEEEEeccCchhHHHHHhcc-----------cchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccce
Confidence 8999999999999999998775 566688999999999999999999 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCC-CCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEV-STNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||++..+.......+ ..|++.|.|||++.+.+| ++++|+||+|+++|-|+.|..||+...
T Consensus 195 kIaDfgfS~~~~~~~~lqt-----~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~---------- 259 (596)
T KOG0586|consen 195 KIADFGFSTFFDYGLMLQT-----FCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN---------- 259 (596)
T ss_pred eeeccccceeecccccccc-----cCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc----------
Confidence 9999999998876544443 459999999999999776 589999999999999999999997321
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+.+.-++.+.+.. ..+.-...++.+++++++..+|.+|++++++.+.
T Consensus 260 -------lk~Lr~rvl~gk~----------------rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 260 -------LKELRPRVLRGKY----------------RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred -------cccccchheeeee----------------cccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 1111111111111 1122344567899999999999999999999865
No 324
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.3e-33 Score=306.57 Aligned_cols=278 Identities=24% Similarity=0.268 Sum_probs=198.7
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.++++++||||+++++++... +....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCcE
Confidence 578999999999999999999988899999999974432 2234677899999999999999999986432 23789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++ ++|.+++.... ..+++.+++.++.|++.||+|||+. +++||||||+||++++++.+||
T Consensus 82 ~lv~e~~~-~~L~~~~~~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l 147 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETMK----------QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKI 147 (293)
T ss_pred EEEehhcC-cCHHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEE
Confidence 99999995 69988886543 2589999999999999999999998 9999999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
+|||.+......... .....++..|+|||.+.+. .++.++||||+|+++|||++|+.||...... ....... .
T Consensus 148 ~d~g~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~-~ 221 (293)
T cd07843 148 CDFGLAREYGSPLKP----YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIF-K 221 (293)
T ss_pred eecCceeeccCCccc----cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-H
Confidence 999999865443211 1123478899999998764 4689999999999999999999998632110 0000000 0
Q ss_pred HHhhh---hhhhhccccccCcchhhhhhHHHHhhhhhccccc-hhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDH---VIDIVDPILINDVEDWDATNKQRLRQAKINGKIE-CPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..... ...............+.......+. ...+.. .++.+.+++.+||+.||++|||++|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 222 LLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLR---KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HhCCCchHHHHHhhccchhcccccccccchhhh---ccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000 0000000000000000000000000 001111 4677899999999999999999999985
No 325
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2e-33 Score=300.90 Aligned_cols=251 Identities=25% Similarity=0.345 Sum_probs=199.9
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|+||.||+|....+|..||+|.+.... ....+.+.+|+.+++.++|+||+++++.+. .+...+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQ-----ENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheec-----cCCeEE
Confidence 4788899999999999999999899999999986432 233457889999999999999999999854 447899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC-cEEE
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM-IAHV 820 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kL 820 (988)
+|+||+++++|.+++..... ..+++..+..++.|+++|++|||+. +++||||||+||++++++ .+||
T Consensus 76 lv~e~~~~~~L~~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l 143 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRG---------VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKL 143 (257)
T ss_pred EEEecCCCCcHHHHHHhccC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEe
Confidence 99999999999999865432 2578999999999999999999998 999999999999999886 5699
Q ss_pred eeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
+|||.+......... .....|+..|+|||+..+..++.++||||||+++|||++|..||... .........
T Consensus 144 ~d~~~~~~~~~~~~~----~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~ 214 (257)
T cd08225 144 GDFGIARQLNDSMEL----AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-----NLHQLVLKI 214 (257)
T ss_pred cccccchhccCCccc----ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHH
Confidence 999999765432211 11235888999999998888999999999999999999999998632 111111111
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.. .... ......+.++.+++.+||..+|++|||+.|+++.
T Consensus 215 ~~----~~~~-----------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 215 CQ----GYFA-----------------------PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred hc----ccCC-----------------------CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00 0000 0112456679999999999999999999999763
No 326
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=286.97 Aligned_cols=277 Identities=21% Similarity=0.301 Sum_probs=215.6
Q ss_pred HHHHHhhCCCCCCceeccccceeEEEEEECCCC-----eEEEEEEeeccc-cchhHHHHHHHHHHHhcCCCCceEEEeec
Q 001974 656 ESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDG-----TIVAIKVFNLQR-HGASKSFLAECKALKNIRHRNLVKVITSC 729 (988)
Q Consensus 656 ~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 729 (988)
.++....++++....+-+|.||.||.|.|...+ +.|-+|.++... .-....+..|.-.+....|||+..+.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 344455567888888999999999999886433 346677765332 23345688898889999999999999998
Q ss_pred ccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCC
Q 001974 730 SSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGN 809 (988)
Q Consensus 730 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 809 (988)
.+ +.+..++++.++.-|+|..|+...+.... ...+.++..+...++.|++.|++|||++ +|||.||.++|
T Consensus 357 ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~---~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRN 426 (563)
T KOG1024|consen 357 IE----DYATPFVLYPATGVGNLKSFLQICRGDDP---SYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARN 426 (563)
T ss_pred ee----ccCcceEEEeccCcchHHHHHHHhccCCC---ccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhc
Confidence 54 45778999999988999999985443211 1225788889999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCcccc
Q 001974 810 VLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFE 888 (988)
Q Consensus 810 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~ 888 (988)
++||+..++||+|=.+++..-+.+..-- ......+..||+||.+....|+.++|||||||++|||+| |+.||....+
T Consensus 427 CvIdd~LqVkltDsaLSRDLFP~DYhcL--GDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP 504 (563)
T KOG1024|consen 427 CVIDDQLQVKLTDSALSRDLFPGDYHCL--GDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP 504 (563)
T ss_pred ceehhheeEEeccchhccccCccccccc--CCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH
Confidence 9999999999999999987655432211 112335789999999999999999999999999999999 9999864311
Q ss_pred CCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 889 GDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
.+ +..++ ..+-.+..+.+||+++..+|.-||+.+|++||++++++..|
T Consensus 505 fE--------------m~~yl------------------kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 505 FE--------------MEHYL------------------KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred HH--------------HHHHH------------------hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 10 00000 01112234568999999999999999999999999999999
Q ss_pred HHHHHHhh
Q 001974 969 QSVKNALL 976 (988)
Q Consensus 969 ~~i~~~~~ 976 (988)
.+...++.
T Consensus 553 seF~~qlt 560 (563)
T KOG1024|consen 553 SEFHTQLT 560 (563)
T ss_pred HHHHHHHh
Confidence 99877653
No 327
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-34 Score=285.70 Aligned_cols=269 Identities=23% Similarity=0.338 Sum_probs=208.7
Q ss_pred HHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeeccccc
Q 001974 655 YESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSID 733 (988)
Q Consensus 655 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 733 (988)
++++.+-++ +.||+|+|+.|--+....+|..||||++.+.......++.+|++++... .|+||++++++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief----- 144 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF----- 144 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH-----
Confidence 455554443 6899999999999999899999999999887667778899999999999 79999999999
Q ss_pred ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC
Q 001974 734 FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD 813 (988)
Q Consensus 734 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~ 813 (988)
|+++..+|+|||-|.||+|..++.+.. .+++.++.++.++|+.||+|||.+ ||.|||+||+|||-.
T Consensus 145 FEdd~~FYLVfEKm~GGplLshI~~~~-----------~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~ 210 (463)
T KOG0607|consen 145 FEDDTRFYLVFEKMRGGPLLSHIQKRK-----------HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCE 210 (463)
T ss_pred hcccceEEEEEecccCchHHHHHHHhh-----------hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeec
Confidence 567799999999999999999997654 689999999999999999999999 999999999999997
Q ss_pred CCC---cEEEeeeccccccccc---ccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhCCCC
Q 001974 814 NDM---IAHVGDFGLARVRQEV---SNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTGKKP 882 (988)
Q Consensus 814 ~~~---~~kL~DfG~a~~~~~~---~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~p 882 (988)
+.. -+|||||.++.-.... ....+..-...+|+..|||||+.. ...|+.+.|.||+|||+|-|++|.+|
T Consensus 211 ~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpP 290 (463)
T KOG0607|consen 211 SPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPP 290 (463)
T ss_pred CCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCC
Confidence 655 4899999887532211 112222234567999999999753 23578899999999999999999999
Q ss_pred CCccccCCcchH-----HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCC
Q 001974 883 TDVMFEGDLNLH-----NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQD 957 (988)
Q Consensus 883 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 957 (988)
|...-..+-.|. ...+..+.+.+.+ ..+.-...+|. .++.+..+++...+..||.+
T Consensus 291 FvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQE---GkYeFPdkdWa----------------hIS~eakdlisnLlvrda~~ 351 (463)
T KOG0607|consen 291 FVGHCGADCGWDRGEVCRVCQNKLFESIQE---GKYEFPDKDWA----------------HISSEAKDLISNLLVRDAKQ 351 (463)
T ss_pred ccCccCCcCCccCCCccHHHHHHHHHHHhc---cCCcCChhhhH----------------HhhHHHHHHHHHHHhccHHh
Confidence 976544432221 2222333332222 11111222332 35667789999999999999
Q ss_pred CCCHHHHHH
Q 001974 958 RMSITNVVH 966 (988)
Q Consensus 958 RPs~~evl~ 966 (988)
|-++.++++
T Consensus 352 rlsa~~vln 360 (463)
T KOG0607|consen 352 RLSAAQVLN 360 (463)
T ss_pred hhhhhhccC
Confidence 999999886
No 328
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.5e-33 Score=303.46 Aligned_cols=243 Identities=21% Similarity=0.267 Sum_probs=185.7
Q ss_pred eeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHh---cCCCCceEEEeecccccccCCCceEEE
Q 001974 670 LIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKN---IRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 670 ~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
.||+|+||.||+|.+..+++.||+|.+..... .....+.+|..+++. .+||+|+.+++++. .++..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence 48999999999999988899999999864321 112334445444333 47999999998854 34788999
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDF 823 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 823 (988)
|||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+||
T Consensus 76 ~e~~~~~~L~~~i~~~~-----------~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~df 141 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG-----------VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 141 (279)
T ss_pred EecCCCCCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccC
Confidence 99999999999886543 689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 824 GLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 824 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
|++....... .....|+..|+|||.+.+ ..++.++||||+||++|||++|..||......... .......
T Consensus 142 g~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~---~~~~~~~ 212 (279)
T cd05633 142 GLACDFSKKK------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH---EIDRMTL 212 (279)
T ss_pred CcceeccccC------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH---HHHHHhh
Confidence 9987543221 112358999999999864 56889999999999999999999998643221100 0000000
Q ss_pred hhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 903 DHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 903 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
. .....+...+.++.+++.+||..||++|| |++|+++.
T Consensus 213 -----~----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 213 -----T----------------------VNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -----c----------------------CCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 0 00011224667899999999999999999 59888774
No 329
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.7e-33 Score=311.35 Aligned_cols=286 Identities=21% Similarity=0.194 Sum_probs=198.1
Q ss_pred CCCCCceeccccceeEEEEEECCC--CeEEEEEEeecc--ccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQD--GTIVAIKVFNLQ--RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~--~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 738 (988)
+|++.+.||+|+||.||+|++..+ +..||+|++... .....+.+.+|+++++++ .||||+++++++... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 478889999999999999999877 889999998632 222346788899999999 599999999875432 12335
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++++||+ +++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||++++++.+
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~~-----------~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~ 144 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSGQ-----------PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCEL 144 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcCC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCE
Confidence 678899998 578998886542 688999999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||.++.................|+..|+|||++.+ ..++.++||||+||++|++++|+.||...... ......
T Consensus 145 kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~--~~~~~~ 222 (332)
T cd07857 145 KICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV--DQLNQI 222 (332)
T ss_pred EeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH--HHHHHH
Confidence 999999998654332211111223468999999998765 56899999999999999999999998642110 000000
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.........+............+.......-...........+..+.+++.+|++.||++|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 223 LQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000000000000000000000000000000112346779999999999999999999998754
No 330
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.2e-33 Score=309.35 Aligned_cols=288 Identities=21% Similarity=0.285 Sum_probs=200.7
Q ss_pred CCCCCceeccccceeEEEEEECC--CCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQ--DGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
+|++.+.||+|+||.||+|.+.. +++.||+|.+.... ....+.+.+|+.++++++||||+++++++... .++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 47888999999999999999987 78999999997532 34456788999999999999999999996532 236
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC----
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN---- 814 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---- 814 (988)
..++||||++ +++.+++........ ..+++..++.++.|++.||+|||+. +|+||||||+||+++.
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~ 147 (316)
T cd07842 78 SVYLLFDYAE-HDLWQIIKFHRQAKR------VSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPE 147 (316)
T ss_pred eEEEEEeCCC-cCHHHHHHhhccCCC------cCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCc
Confidence 7899999995 567766643322111 2688999999999999999999998 9999999999999999
Q ss_pred CCcEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 815 DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 815 ~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
++.+||+|||++......... ........++..|+|||++.+ ..++.++|||||||++|||++|++||..........
T Consensus 148 ~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~ 226 (316)
T cd07842 148 RGVVKIGDLGLARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKS 226 (316)
T ss_pred cceEEECCCccccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccccc
Confidence 999999999999865433221 111223457889999998766 457899999999999999999999997543322110
Q ss_pred HHHHHHHHhhhhhhhhcccccc------CcchhhhhhHHHHh--------hhhhccccchhHHHHHHhhcccCcCCCCCC
Q 001974 894 HNYARTALLDHVIDIVDPILIN------DVEDWDATNKQRLR--------QAKINGKIECPISMVRIGVACSVESPQDRM 959 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~------~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 959 (988)
..+..... ..+.+.+...... ...++......... ............++.+++.+|++.||++||
T Consensus 227 ~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 305 (316)
T cd07842 227 NPFQRDQL-ERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRI 305 (316)
T ss_pred chhHHHHH-HHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCc
Confidence 00100000 0111111100000 00000000000000 000000124556789999999999999999
Q ss_pred CHHHHHH
Q 001974 960 SITNVVH 966 (988)
Q Consensus 960 s~~evl~ 966 (988)
|+.|+++
T Consensus 306 s~~eil~ 312 (316)
T cd07842 306 TAEEALE 312 (316)
T ss_pred CHHHHhc
Confidence 9999975
No 331
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.6e-33 Score=302.56 Aligned_cols=249 Identities=26% Similarity=0.356 Sum_probs=197.4
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcC---CCCceEEEeecccccccCCCc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIR---HRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~~~~ 739 (988)
.|+..+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++ |||++++++++. .+..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 4778899999999999999998899999999986442 334467889999999996 999999999854 3478
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+++++|.+++... .+++..++.++.|++.||.|||+. +++||||+|+||++++++.++
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~------------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~ 141 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG------------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVK 141 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEE
Confidence 89999999999999998542 578899999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||.+........ ......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ....
T Consensus 142 l~dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~ 212 (277)
T cd06917 142 LCDFGVAALLNQNSS----KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMM 212 (277)
T ss_pred EccCCceeecCCCcc----ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhh
Confidence 999999986544321 1122458889999998875 45688999999999999999999998632110 0000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.......+.+ .....+.++.+++.+||+.||++||++.|+++.
T Consensus 213 -----~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 213 -----LIPKSKPPRL---------------------EDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred -----ccccCCCCCC---------------------CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0000000000 001256779999999999999999999999863
No 332
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.9e-33 Score=296.38 Aligned_cols=250 Identities=28% Similarity=0.397 Sum_probs=202.8
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
+|+..+.||+|++|.||+|.+..+++.|++|++........+.+.+|++++++++|++++++++++. .+...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEE
Confidence 4788899999999999999998889999999997655446678999999999999999999999854 34788999
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDF 823 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 823 (988)
+||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+||
T Consensus 76 ~e~~~~~~L~~~~~~~~----------~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~ 142 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN----------QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDF 142 (253)
T ss_pred EecCCCCcHHHHHhhcC----------CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeec
Confidence 99999999999987653 2689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhh
Q 001974 824 GLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 824 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
|.+........ .....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ..........
T Consensus 143 ~~~~~~~~~~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~ 212 (253)
T cd05122 143 GLSAQLSDTKA-----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-----MKALFKIATN 212 (253)
T ss_pred ccccccccccc-----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHhc
Confidence 99986554321 1234578899999999888899999999999999999999999863210 0000000000
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. ........++..+.+++.+||+.||++|||+.|+++
T Consensus 213 ------~~-------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 213 ------GP-------------------PGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred ------CC-------------------CCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 000111224677999999999999999999999975
No 333
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.4e-33 Score=302.49 Aligned_cols=245 Identities=25% Similarity=0.322 Sum_probs=191.9
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
||+|+||+||+|.+..+|+.||+|.+.... ......+..|+++++.++||||+++++++. ..+..++||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFE-----TKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEe-----cCCeEEEEEecC
Confidence 689999999999998899999999986432 223446678999999999999999998853 457899999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++++|.+++..... ..+++.++..++.|++.|+.|||+. +++||||+|+||++++++.+||+|||.+.
T Consensus 76 ~~~~L~~~l~~~~~---------~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~ 143 (277)
T cd05577 76 NGGDLKYHIYNVGE---------PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAV 143 (277)
T ss_pred CCCcHHHHHHHcCc---------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchh
Confidence 99999999865432 2588999999999999999999998 99999999999999999999999999987
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVID 907 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (988)
....... .....++..|+|||++.+..++.++||||+||++|+|++|+.||....... ... .+.....
T Consensus 144 ~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~-----~~~~~~~- 211 (277)
T cd05577 144 ELKGGKK-----IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKE-----ELKRRTL- 211 (277)
T ss_pred hhccCCc-----cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHH-----HHHhccc-
Confidence 6543111 122357889999999988889999999999999999999999986422110 000 0000000
Q ss_pred hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHH
Q 001974 908 IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVH 966 (988)
Q Consensus 908 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 966 (988)
......+...++.+.+++.+||+.||++|| ++.++++
T Consensus 212 ----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 212 ----------------------EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ----------------------cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 000111224567899999999999999999 6666654
No 334
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.7e-33 Score=303.35 Aligned_cols=272 Identities=20% Similarity=0.227 Sum_probs=194.4
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
|++.+.||+|+||.||+|....+++.||+|+++... ........+|+.+++++ .|+|++++++++... ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 677899999999999999998899999999986432 22223455788899988 499999999986532 2367899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||++ +++.+++.... ..+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|
T Consensus 78 v~e~~~-~~l~~~l~~~~----------~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~d 142 (282)
T cd07831 78 VFELMD-MNLYELIKGRK----------RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLAD 142 (282)
T ss_pred EEecCC-ccHHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEe
Confidence 999995 68888876533 2589999999999999999999998 9999999999999999 9999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.++......... ...++..|+|||++.. ..++.++||||+||++|||++|+.||..... .+.........
T Consensus 143 fg~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~ 215 (282)
T cd07831 143 FGSCRGIYSKPPYT-----EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVL 215 (282)
T ss_pred cccccccccCCCcC-----CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHc
Confidence 99998654332211 2347889999997654 5578899999999999999999999864211 11111111111
Q ss_pred hhh---hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDH---VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... +........... ..+.......+ .......+.++.+++.+||+.+|++||+++|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 216 GTPDAEVLKKFRKSRHMN-YNFPSKKGTGL----RKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CCCCHHHHHhhccccccc-ccCcccccccH----HHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000 000000000000 00000000000 0111245788999999999999999999999986
No 335
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.4e-33 Score=303.27 Aligned_cols=255 Identities=25% Similarity=0.337 Sum_probs=204.4
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
...+.|+..+.||+|++|.||+|.+..+++.||+|+++.... ..+.+.+|+++++.++|+|++++++++.. ++.
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 89 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-----GDE 89 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----CCE
Confidence 356678899999999999999999988899999999975544 45678899999999999999999998643 478
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~----------~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~ 156 (286)
T cd06614 90 LWVVMEYMDGGSLTDIITQNF----------VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVK 156 (286)
T ss_pred EEEEEeccCCCcHHHHHHHhc----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEE
Confidence 999999999999999997643 2689999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||.+........ ......++..|+|||++.+..++.++|||||||++|+|++|+.||...... .....
T Consensus 157 l~d~~~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-----~~~~~ 227 (286)
T cd06614 157 LADFGFAAQLTKEKS----KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-----RALFL 227 (286)
T ss_pred ECccchhhhhccchh----hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 999999875443221 112234788999999998888999999999999999999999997632110 00000
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
..... . ........++..+.+++.+||+.+|.+||++.++++.
T Consensus 228 ~~~~~--------~-----------------~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 228 ITTKG--------I-----------------PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred HHhcC--------C-----------------CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00000 0 0001112356789999999999999999999999863
No 336
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3e-33 Score=309.74 Aligned_cols=281 Identities=25% Similarity=0.288 Sum_probs=201.4
Q ss_pred HHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeeccccccc
Q 001974 658 LFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 658 l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 735 (988)
+...+++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 80 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS---- 80 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec----
Confidence 445678999999999999999999999989999999987532 22334678899999999999999999998643
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.....++|+||+ +++|.+++... ++++..+..++.|+++||+|||+. +|+||||+|+||+++++
T Consensus 81 ~~~~~~lv~e~~-~~~L~~~~~~~------------~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~ 144 (328)
T cd07856 81 PLEDIYFVTELL-GTDLHRLLTSR------------PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINEN 144 (328)
T ss_pred CCCcEEEEeehh-ccCHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCC
Confidence 235789999999 67898887542 467778889999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
+.++|+|||.+...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... ....
T Consensus 145 ~~~~l~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~--~~~~ 215 (328)
T cd07856 145 CDLKICDFGLARIQDPQ-------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH--VNQF 215 (328)
T ss_pred CCEEeCccccccccCCC-------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHH
Confidence 99999999998754321 112347889999998766 5689999999999999999999999863211 0000
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
............++..........+...........+.......++.++.+++.+||+.+|++||++++++..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 216 SIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111111110111111000000000000000000000001112456789999999999999999999998765
No 337
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.1e-33 Score=307.96 Aligned_cols=282 Identities=24% Similarity=0.267 Sum_probs=199.0
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
..++|++.+.||+|+||.||+|.+..+|+.||+|+++.... .....+.+|+.++++++|+||+++++++... ..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCC
Confidence 34679999999999999999999998999999999874432 2234567899999999999999999986432 235
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||++ ++|.+++.... ..+++.++..++.||+.|++|||+. +++||||||+||++++++.+
T Consensus 82 ~~~lv~e~~~-~~l~~~l~~~~----------~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~ 147 (309)
T cd07845 82 SIFLVMEYCE-QDLASLLDNMP----------TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCL 147 (309)
T ss_pred eEEEEEecCC-CCHHHHHHhcc----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 6899999995 68888876543 3689999999999999999999999 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||.+......... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... .......
T Consensus 148 kL~dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~ 221 (309)
T cd07845 148 KIADFGLARTYGLPAKP----MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLI 221 (309)
T ss_pred EECccceeeecCCccCC----CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHH
Confidence 99999999865432211 112235788999999865 4578999999999999999999999863211 1111111
Q ss_pred HHHHhhhhhhhhcccc-ccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 898 RTALLDHVIDIVDPIL-INDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
................ ......... ....... ........++++.+++.+|++.||++|||++|+++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 222 IQLLGTPNESIWPGFSDLPLVGKFTL-PKQPYNN-LKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred HHhcCCCChhhchhhhcccccccccc-cCCCCCc-hHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1100000000000000 000000000 0000000 000011246678899999999999999999999863
No 338
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=8.1e-33 Score=297.32 Aligned_cols=247 Identities=21% Similarity=0.285 Sum_probs=191.2
Q ss_pred HHhhCCCCCCcee--ccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeeccccccc
Q 001974 659 FKATDGFSSTHLI--GMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 659 ~~~~~~y~~~~~l--g~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 735 (988)
....++|++.+.+ |+|+||.||+++.+.+++.+|+|++....... .|+.....+ +||||+++++++..
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~---- 80 (267)
T PHA03390 10 VQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTT---- 80 (267)
T ss_pred HHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEec----
Confidence 3344677777776 99999999999999899999999986432221 122222223 79999999998543
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
++..++||||+++++|.+++.... .+++.++..++.|+++|++|||+. +++||||||+||+++.+
T Consensus 81 -~~~~~iv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~ 145 (267)
T PHA03390 81 -LKGHVLIMDYIKDGDLFDLLKKEG-----------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRA 145 (267)
T ss_pred -CCeeEEEEEcCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCC
Confidence 478999999999999999996543 689999999999999999999998 99999999999999999
Q ss_pred C-cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 816 M-IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 816 ~-~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
+ .++|+|||.+....... ...++..|+|||++.+..++.++||||+|+++|||++|+.||......+....
T Consensus 146 ~~~~~l~dfg~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~ 217 (267)
T PHA03390 146 KDRIYLCDYGLCKIIGTPS--------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE 217 (267)
T ss_pred CCeEEEecCccceecCCCc--------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence 8 99999999987543321 23478999999999998999999999999999999999999874322221111
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC-HHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS-ITNVVH 966 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 966 (988)
.+.... ..........++.+.+++.+||+.+|.+||+ ++|+++
T Consensus 218 ~~~~~~-----------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 218 SLLKRQ-----------------------------QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHHhh-----------------------------cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 111100 0000111246677999999999999999996 588774
No 339
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.2e-33 Score=304.32 Aligned_cols=283 Identities=22% Similarity=0.287 Sum_probs=198.1
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 739 (988)
++|++.+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.+++++ +||||+++++++..........
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 468899999999999999999998999999999864322 2346788899999999 5699999999876542222334
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-CCcE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN-DMIA 818 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~ 818 (988)
.++||||++ ++|.+++....... ...+++..++.++.||+.||+|||+. +|+||||+|+||+++. ++.+
T Consensus 81 ~~lv~e~~~-~~l~~~~~~~~~~~------~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~ 150 (295)
T cd07837 81 LYLVFEYLD-SDLKKFMDSNGRGP------GRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLL 150 (295)
T ss_pred EEEEeeccC-cCHHHHHHHhcccC------CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeE
Confidence 799999996 58888876433210 13579999999999999999999998 9999999999999998 8899
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||.+......... .....+++.|+|||++.+ ..++.++||||||+++|+|++|..||.... ......
T Consensus 151 kl~dfg~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~----~~~~~~ 222 (295)
T cd07837 151 KIADLGLGRAFSIPVKS----YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDS----ELQQLL 222 (295)
T ss_pred EEeecccceecCCCccc----cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCC----HHHHHH
Confidence 99999998754332111 112246788999998765 457899999999999999999999986321 111111
Q ss_pred HH--HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 898 RT--ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 898 ~~--~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. .......... +... ....+..... .............+.++.+++.+||+.||++||+++|++.
T Consensus 223 ~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 223 HIFKLLGTPTEQVW-PGVS-KLRDWHEFPQ-WKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHHHHhCCCChhhC-cchh-hccchhhcCc-ccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0000000000 0000 0000000000 0000000111346778999999999999999999999875
No 340
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.7e-33 Score=302.88 Aligned_cols=278 Identities=24% Similarity=0.319 Sum_probs=198.2
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
+|++.+.||+|++|.||+|++..+|+.||+|+++.... ...+.+.+|++++++++|+||+++++++.. .+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-----ENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-----CCcEEE
Confidence 58889999999999999999988999999999875432 334667889999999999999999999643 478899
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||++ ++|.+++...... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|
T Consensus 76 v~e~~~-~~l~~~~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d 143 (284)
T cd07836 76 VFEYMD-KDLKKYMDTHGVR--------GALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLAD 143 (284)
T ss_pred EEecCC-ccHHHHHHhcCCC--------CCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEee
Confidence 999996 5888887654311 2589999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||++........ ......++..|+|||++.+. .++.++|||||||++|+|++|+.||...... ......... .
T Consensus 144 ~g~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~-~ 217 (284)
T cd07836 144 FGLARAFGIPVN----TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRI-M 217 (284)
T ss_pred cchhhhhcCCcc----ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHH-h
Confidence 999975433211 11123468899999987664 5688999999999999999999998642111 001110000 0
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.....+.... +. ....+...................+..+.+++.+|++.||++||+++|+++
T Consensus 218 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 218 GTPTESTWPG-IS-QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CCCChhhHHH-Hh-cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000000 00 000000000000000000111235677899999999999999999999975
No 341
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-33 Score=326.24 Aligned_cols=263 Identities=23% Similarity=0.322 Sum_probs=193.2
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc-ccchhHHHHHHHHHHHhcCCCCceEEEeeccccc-----
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-RHGASKSFLAECKALKNIRHRNLVKVITSCSSID----- 733 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 733 (988)
+-..+|+..+.||+||||.||+++.+-+|+.||||++... .......+.+|+..+++++|||||+++..+.+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 3456788899999999999999999999999999999754 2334467889999999999999999984431110
Q ss_pred --------------------------------------------------cc----------------------------
Q 001974 734 --------------------------------------------------FQ---------------------------- 735 (988)
Q Consensus 734 --------------------------------------------------~~---------------------------- 735 (988)
+.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 00
Q ss_pred -------------------------------CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHH
Q 001974 736 -------------------------------GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAID 784 (988)
Q Consensus 736 -------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 784 (988)
.....||-||||+...++++++.+... -.....++++++
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----------~~~d~~wrLFre 705 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----------SQRDEAWRLFRE 705 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----------hhhHHHHHHHHH
Confidence 002357889999888888888766521 035678999999
Q ss_pred HHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeeccccccc----cc----------ccccceeccccccccccc
Q 001974 785 VASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQ----EV----------SNLTQSCSVGVRGTIGYA 850 (988)
Q Consensus 785 i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~----~~----------~~~~~~~~~~~~gt~~y~ 850 (988)
|++||+|+|++ |||||||||.||++|++..|||+|||+|+... .. ........++.+||.-|+
T Consensus 706 IlEGLaYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv 782 (1351)
T KOG1035|consen 706 ILEGLAYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYV 782 (1351)
T ss_pred HHHHHHHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeee
Confidence 99999999999 99999999999999999999999999998722 10 011111234578999999
Q ss_pred cCcccCCC---CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHH
Q 001974 851 APEYGLGS---EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQR 927 (988)
Q Consensus 851 aPE~~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 927 (988)
|||++.+. .|+.|+|+||+|||++||+. ||....+. ......++ +..+..+ +++
T Consensus 783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER---------a~iL~~LR---~g~iP~~-~~f------- 839 (1351)
T KOG1035|consen 783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMER---------ASILTNLR---KGSIPEP-ADF------- 839 (1351)
T ss_pred cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHH---------HHHHHhcc---cCCCCCC-ccc-------
Confidence 99998875 49999999999999999986 56543221 11111111 1111111 000
Q ss_pred HhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 928 LRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 928 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
..+..+.-..+|.+|++.||.+||||.|+++
T Consensus 840 --------~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 840 --------FDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred --------ccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 0111223468999999999999999999985
No 342
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4e-33 Score=310.28 Aligned_cols=292 Identities=21% Similarity=0.219 Sum_probs=207.8
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|++|.||+|+...+++.||+|++.... ....+.+.+|+.+++.++|+||+++++++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999998889999999986533 34456889999999999999999999987654222234789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||++ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+
T Consensus 81 lv~e~~~-~~l~~~l~~~~-----------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~ 145 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-----------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKIC 145 (330)
T ss_pred EEecchh-hhHHHHHhCCC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEc
Confidence 9999996 68988886543 688999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTA 900 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 900 (988)
|||.+......... ........++..|+|||++.+. .++.++||||+|+++|+|++|+.||...... .........
T Consensus 146 dfg~~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~ 222 (330)
T cd07834 146 DFGLARGVDPDEDE-KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEV 222 (330)
T ss_pred ccCceEeecccccc-cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHh
Confidence 99999866543211 0112234578899999999887 7899999999999999999999998643211 000000000
Q ss_pred HhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH--HHHHHH
Q 001974 901 LLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE--LQSVKN 973 (988)
Q Consensus 901 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~~ 973 (988)
......+...........++...................+..+.+++.+||+.+|++||+++++++. ++.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 223 LGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred cCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 0000000000000000000000000000000111123467789999999999999999999999974 555443
No 343
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.7e-33 Score=304.29 Aligned_cols=255 Identities=25% Similarity=0.308 Sum_probs=192.6
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhcC-CCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|+..+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.++.++. |+||+++++++. .++..+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcEE
Confidence 4666789999999999999999899999999986433 234467889999999995 999999999854 347788
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
++|||+. +++.++...... .....+++..+..++.|++.||+|||+. .+++||||||+||+++.++.+||+
T Consensus 80 ~~~e~~~-~~l~~l~~~~~~------~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~ 150 (288)
T cd06616 80 ICMELMD-ISLDKFYKYVYE------VLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLC 150 (288)
T ss_pred EEEeccc-CCHHHHHHHHHH------hhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEe
Confidence 9999984 455443321000 0013688999999999999999999973 289999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCC---CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS---EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|||+++........ ....|+..|+|||++.+. .++.++|||||||++|||++|+.||.... ..
T Consensus 151 dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~----- 216 (288)
T cd06616 151 DFGISGQLVDSIAK-----TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SV----- 216 (288)
T ss_pred ecchhHHhccCCcc-----ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hH-----
Confidence 99999755432211 123478899999998876 68899999999999999999999986321 00
Q ss_pred HHHhhhhhhhh---ccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 899 TALLDHVIDIV---DPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.+.+.... .+.+.. .....++.++.+++.+||+.||++|||++||++.
T Consensus 217 ---~~~~~~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 217 ---FDQLTQVVKGDPPILSN------------------SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ---HHHHhhhcCCCCCcCCC------------------cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111100 000000 1112467789999999999999999999999874
No 344
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.8e-33 Score=301.96 Aligned_cols=276 Identities=28% Similarity=0.345 Sum_probs=197.7
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
|++.+.||+|++|.||+|.+..+|+.||+|++.... ....+.+.+|+++++.++|||++++++++. +++..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 677899999999999999998899999999987443 223467889999999999999999999854 4488999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+ +++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|
T Consensus 76 v~e~~-~~~l~~~~~~~~~---------~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~d 142 (283)
T cd07835 76 VFEFL-DLDLKKYMDSSPL---------TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLAD 142 (283)
T ss_pred EEecc-CcCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEee
Confidence 99999 5789999865432 2589999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.+......... .....++..|+|||++.+. .++.++||||||+++|+|++|+.||...... .......+. .
T Consensus 143 f~~~~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~-~ 216 (283)
T cd07835 143 FGLARAFGVPVRT----YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRT-L 216 (283)
T ss_pred cccccccCCCccc----cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH-h
Confidence 9999754322111 1123468899999987664 5788999999999999999999998632110 001111000 0
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
........+. .. ...++...................+.++.+++.+||+.||++|||++|+++
T Consensus 217 ~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 217 GTPDEDVWPG-VT-SLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CCCChHHhhh-hh-hchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000000 00 000000000000000001112346678999999999999999999999975
No 345
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=9.1e-33 Score=303.50 Aligned_cols=286 Identities=22% Similarity=0.300 Sum_probs=201.6
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeeccccc----
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSID---- 733 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 733 (988)
...++|++.+.||+|+||.||+|.++.+++.||+|+++... ......+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34678999999999999999999999889999999997432 233356788999999999999999999875432
Q ss_pred -ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 734 -FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 734 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
..+....++|+||+++ ++.+++.... ..+++.++..++.||+.||+|||+. +|+||||||+||++
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~----------~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili 149 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL----------VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILL 149 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 1223478999999965 7777665432 2689999999999999999999998 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDL 891 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~ 891 (988)
++++.+||+|||.+......... ......++..|+|||.+.+ ..++.++|||||||++|||++|++||.... ..
T Consensus 150 ~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~--~~ 224 (302)
T cd07864 150 NNKGQIKLADFGLARLYNSEESR---PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ--EL 224 (302)
T ss_pred CCCCcEEeCcccccccccCCccc---ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hH
Confidence 99999999999999865443211 1112346788999998765 457889999999999999999999986321 11
Q ss_pred chHHHHHHHHhhhhhhhhccccccCcchhhhhh-HHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 892 NLHNYARTALLDHVIDIVDPILINDVEDWDATN-KQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.................... .. ....+.... ...............+..+.+++.+||+.||++||+++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 225 AQLELISRLCGSPCPAVWPD-VI-KLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHHHHhCCCChhhccc-cc-ccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11111111111110000000 00 000000000 000000000112245788999999999999999999999875
No 346
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-33 Score=328.14 Aligned_cols=276 Identities=22% Similarity=0.394 Sum_probs=213.1
Q ss_pred HHHhhCCCCCCceeccccceeEEEEEEC---C----CCeEEEEEEeecccc-chhHHHHHHHHHHHhc-CCCCceEEEee
Q 001974 658 LFKATDGFSSTHLIGMGSFGSVYKGAFD---Q----DGTIVAIKVFNLQRH-GASKSFLAECKALKNI-RHRNLVKVITS 728 (988)
Q Consensus 658 l~~~~~~y~~~~~lg~G~~g~Vy~a~~~---~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~ 728 (988)
++...++..+.+.+|+|.||.||+|... . ....||||..+.... ...+.+..|+++|+.+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3444555667779999999999999863 1 145799999874433 4557899999999999 79999999999
Q ss_pred cccccccCCCceEEEEeeccccchhhhcCCCC-CC--CchhhhHh--hcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEec
Q 001974 729 CSSIDFQGNDFKALVYEFMTNGSLENWLHPDA-VP--QKDVEIEI--QKLTLLQRINIAIDVASAIDYLHHHCQEPVLHC 803 (988)
Q Consensus 729 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~--~~~~~~~~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 803 (988)
|.. ++..++|+||++.|+|.+|++..+ .. ........ ..++..+.+.++.|||.|++||++. ++|||
T Consensus 371 ~t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHR 442 (609)
T KOG0200|consen 371 CTQ-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHR 442 (609)
T ss_pred ecc-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccch
Confidence 875 488999999999999999999877 10 00000011 2389999999999999999999999 99999
Q ss_pred cCCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCC
Q 001974 804 DLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKP 882 (988)
Q Consensus 804 Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p 882 (988)
|+.++|||++++..+||+|||+|+..............+. -+..|||||.+....|+.++|||||||++||++| |..|
T Consensus 443 DLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~P 521 (609)
T KOG0200|consen 443 DLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTP 521 (609)
T ss_pred hhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCC
Confidence 9999999999999999999999996555443322211111 3556999999999999999999999999999999 9999
Q ss_pred CCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHH
Q 001974 883 TDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSIT 962 (988)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 962 (988)
|...... .++..+ +. .......+..|+.+++++|+.||+.+|++||+++
T Consensus 522 Yp~~~~~-~~l~~~------------l~------------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~ 570 (609)
T KOG0200|consen 522 YPGIPPT-EELLEF------------LK------------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFS 570 (609)
T ss_pred CCCCCcH-HHHHHH------------Hh------------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHH
Confidence 8642100 000000 00 1112234557889999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 001974 963 NVVHELQSVKN 973 (988)
Q Consensus 963 evl~~L~~i~~ 973 (988)
++++.++....
T Consensus 571 ~~~~~~~~~l~ 581 (609)
T KOG0200|consen 571 ECVEFFEKHLQ 581 (609)
T ss_pred HHHHHHHHHHH
Confidence 99999998543
No 347
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.3e-35 Score=280.36 Aligned_cols=288 Identities=23% Similarity=0.319 Sum_probs=207.5
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEee--ccccchhHHHHHHHHHHHhcCCCCceEEEeecccccc---cC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFN--LQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDF---QG 736 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 736 (988)
...|+...+||+|.||.||+|+.+.+|+.||+|.+- .+..+......+|++++..++|+|++.+++.|....- .+
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 345777789999999999999999999999998764 3344556788999999999999999999999875422 23
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
....++||.+| .-+|...+.... .+++..++.++++++..||.|+|.. .|+|||+||+|++|+.+|
T Consensus 96 r~t~ylVf~~c-ehDLaGlLsn~~----------vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dg 161 (376)
T KOG0669|consen 96 RATFYLVFDFC-EHDLAGLLSNRK----------VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDG 161 (376)
T ss_pred cceeeeeHHHh-hhhHHHHhcCcc----------ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCc
Confidence 34589999999 468888887664 4799999999999999999999999 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
.+||+|||+|+.+..............+.|..|++||.+.+ ..|+++.|||+.||++.||+||.+-++.-.+ .....
T Consensus 162 ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte--qqql~ 239 (376)
T KOG0669|consen 162 ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE--QQQLH 239 (376)
T ss_pred eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH--HHHHH
Confidence 99999999998766554443333445667999999998877 5799999999999999999999988653211 11111
Q ss_pred HHHHHHhhhhhhh---hccc-cccCc--chhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 896 YARTALLDHVIDI---VDPI-LINDV--EDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 896 ~~~~~~~~~~~~~---~d~~-l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.+.........+. .|.. +.... +.........++.. -.+..-.++..+|+.+++..||.+|++++++++.
T Consensus 240 ~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~--~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 240 LISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNR--LKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhh--cccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1111111111111 1100 00000 00000000001000 0112223467899999999999999999998754
No 348
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.2e-32 Score=295.00 Aligned_cols=252 Identities=25% Similarity=0.373 Sum_probs=203.4
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+.+|+++++.++|+|++++.+.+. .++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 47888999999999999999988899999999975433 45567889999999999999999999853 347889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|+||+++++|.+++...... ...+++.++..++.+++.|++|||+. +++|+||+|+||++++++.++|+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~-------~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~ 145 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKE-------GKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLG 145 (258)
T ss_pred EEEEecCCCcHHHHHHHhhcc-------CCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEEC
Confidence 999999999999998764311 13689999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.+........ ......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... .........
T Consensus 146 d~~~~~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~ 216 (258)
T cd08215 146 DFGISKVLSSTVD----LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKIL 216 (258)
T ss_pred CccceeecccCcc----eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHh
Confidence 9999986544321 1122357889999999988889999999999999999999999986321 111111100
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. . ....+..++.++.+++.+||..+|++|||+.|+++
T Consensus 217 ~~--------~-------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 217 KG--------Q-------------------YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred cC--------C-------------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 0 00112246678999999999999999999999986
No 349
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-34 Score=257.83 Aligned_cols=198 Identities=28% Similarity=0.453 Sum_probs=171.0
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.|...++||+|.||+||+|+...+++.||+|+++.. +++......+|+-+++.++|.|||+++++. ..+...-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl-----hsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL-----HSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh-----ccCceeE
Confidence 466678999999999999999999999999999744 344557889999999999999999999984 4458889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|+||| ..+|..|..... +.++.+.+..++.|+++|+.++|++ ++.|||+||.|.+|+.+|+.|++
T Consensus 78 lvfe~c-dqdlkkyfdsln----------g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkla 143 (292)
T KOG0662|consen 78 LVFEFC-DQDLKKYFDSLN----------GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLA 143 (292)
T ss_pred EeHHHh-hHHHHHHHHhcC----------CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEec
Confidence 999999 678998887654 3688899999999999999999999 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCC-CCCccchHHHHHHHHHHHh-CCCCCC
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSE-VSTNGDIYSYGILLLEMVT-GKKPTD 884 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwslG~vl~ellt-g~~p~~ 884 (988)
|||+|+.+.- ...+....+.|..|++|.++.+.+ |++..|+||.||++.|+.. |++.|.
T Consensus 144 dfglarafgi----pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp 204 (292)
T KOG0662|consen 144 DFGLARAFGI----PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_pred ccchhhhcCC----ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC
Confidence 9999986543 233445566899999999998864 7889999999999999988 665554
No 350
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.5e-32 Score=303.19 Aligned_cols=247 Identities=26% Similarity=0.326 Sum_probs=193.8
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
|+..+.||+|+||.||+|++..++..||+|++.... ......+.+|++++++++|||++++++++.. ++..+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 101 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-----EHTAW 101 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----CCeEE
Confidence 667889999999999999998899999999986432 2233578899999999999999999999643 46789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||++ |++.+++.... .++++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+
T Consensus 102 lv~e~~~-g~l~~~~~~~~----------~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~ 167 (317)
T cd06635 102 LVMEYCL-GSASDLLEVHK----------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLA 167 (317)
T ss_pred EEEeCCC-CCHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEe
Confidence 9999995 57777765432 3688999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|||++...... ....++..|+|||++. ...++.++|||||||++|||++|+.||...... ....
T Consensus 168 dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~ 234 (317)
T cd06635 168 DFGSASIASPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALY 234 (317)
T ss_pred cCCCccccCCc--------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-----HHHH
Confidence 99998754321 1234788999999974 456889999999999999999999997532100 0000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
. +..... ........+..+.+++.+||+.+|++||++.++++...
T Consensus 235 ~--------~~~~~~------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 235 H--------IAQNES------------------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred H--------HHhccC------------------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 0 000000 00011245667899999999999999999999998643
No 351
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.3e-33 Score=309.29 Aligned_cols=286 Identities=22% Similarity=0.264 Sum_probs=199.9
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 737 (988)
..++|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++++ +||||+++++++... ++
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---ND 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC---CC
Confidence 356789999999999999999999888999999988532 223345677899999999 999999999986432 33
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++||||++ ++|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~------------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~ 145 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN------------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCR 145 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCc
Confidence 56899999995 6998888543 467888899999999999999998 9999999999999999999
Q ss_pred EEEeeecccccccccccc-cceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 818 AHVGDFGLARVRQEVSNL-TQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
+||+|||.+......... .........|+..|+|||++.+ ..++.++||||||+++|+|++|+.||......+ ...
T Consensus 146 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~--~~~ 223 (337)
T cd07852 146 VKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN--QLE 223 (337)
T ss_pred EEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH--HHH
Confidence 999999999865433211 0112223468899999998765 457889999999999999999999986321110 000
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
...........+..+........+...................++.++.+++.+||+.||++|||+.++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 224 KIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000000000000000000000000000000000001112367889999999999999999999999975
No 352
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=7.3e-33 Score=301.60 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=196.5
Q ss_pred CCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEee
Q 001974 667 STHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEF 746 (988)
Q Consensus 667 ~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 746 (988)
...+||+|+||.||+|....+++.||+|.+..........+.+|+.+++.++|+|++++++++. .++..++||||
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~ 98 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEF 98 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEEec
Confidence 3468999999999999998899999999986554445567889999999999999999999854 45789999999
Q ss_pred ccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeeccc
Q 001974 747 MTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLA 826 (988)
Q Consensus 747 ~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 826 (988)
+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+
T Consensus 99 ~~~~~L~~~~~~~------------~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~ 163 (292)
T cd06657 99 LEGGALTDIVTHT------------RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFC 163 (292)
T ss_pred CCCCcHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccc
Confidence 9999999987532 478889999999999999999998 9999999999999999999999999988
Q ss_pred ccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhh
Q 001974 827 RVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVI 906 (988)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (988)
........ ......++..|+|||.+.+..++.++||||+|+++|+|++|..||..... ..... . +.
T Consensus 164 ~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~-----~~~~~-~----~~ 229 (292)
T cd06657 164 AQVSKEVP----RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP-----LKAMK-M----IR 229 (292)
T ss_pred eecccccc----cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH-H----HH
Confidence 75433211 11224578899999999888889999999999999999999999863100 00000 0 00
Q ss_pred hhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 907 DIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 907 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
....+. ......++..+.+++.+||+.+|.+||++.++++.
T Consensus 230 ~~~~~~--------------------~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 230 DNLPPK--------------------LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred hhCCcc--------------------cCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 000000 01112456778999999999999999999999873
No 353
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-32 Score=307.90 Aligned_cols=288 Identities=21% Similarity=0.259 Sum_probs=203.9
Q ss_pred HHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccc
Q 001974 655 YESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSI 732 (988)
Q Consensus 655 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 732 (988)
..++...+++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 4556778899999999999999999999998899999999986432 22345678899999999999999999986533
Q ss_pred c-ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCee
Q 001974 733 D-FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVL 811 (988)
Q Consensus 733 ~-~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 811 (988)
. +......+++++++ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~------------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl 152 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ------------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLA 152 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEE
Confidence 1 12334578888887 88998887532 578899999999999999999998 9999999999999
Q ss_pred eCCCCcEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCC
Q 001974 812 LDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGD 890 (988)
Q Consensus 812 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~ 890 (988)
+++++.+||+|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......
T Consensus 153 l~~~~~~kl~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~- 224 (345)
T cd07877 153 VNEDCELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI- 224 (345)
T ss_pred EcCCCCEEEeccccccccccc-------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 999999999999998754321 122357889999998766 56788999999999999999999998532110
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.......... .....+............+...................++++.+++.+|++.||.+||++.++++.
T Consensus 225 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 225 DQLKLILRLV-GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHHHHh-CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0111110000 000001000000000000000000000000000011346678999999999999999999999865
No 354
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.2e-32 Score=295.85 Aligned_cols=243 Identities=23% Similarity=0.320 Sum_probs=193.9
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
||.|++|.||+|++..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. ++...++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEecC
Confidence 689999999999998889999999986432 234467899999999999999999999854 457899999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 76 ~~~~L~~~l~~~~-----------~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~ 141 (262)
T cd05572 76 LGGELWTILRDRG-----------LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAK 141 (262)
T ss_pred CCCcHHHHHhhcC-----------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCccc
Confidence 9999999997643 478889999999999999999998 99999999999999999999999999998
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVID 907 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (988)
...... ......++..|+|||.+.+..++.++|+||+|+++|+|++|..||....... ......
T Consensus 142 ~~~~~~-----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~-------- 205 (262)
T cd05572 142 KLKSGQ-----KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYND-------- 205 (262)
T ss_pred ccCccc-----ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHH--------
Confidence 654432 1122357889999999988889999999999999999999999986432110 001000
Q ss_pred hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC-----HHHHHH
Q 001974 908 IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS-----ITNVVH 966 (988)
Q Consensus 908 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 966 (988)
+.+. ......+...+.++.+++.+||+.+|++||+ ++|+++
T Consensus 206 ~~~~------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 206 ILKG------------------NGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred Hhcc------------------CCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 0000 0011122234678999999999999999999 666654
No 355
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.2e-32 Score=300.27 Aligned_cols=277 Identities=25% Similarity=0.310 Sum_probs=198.8
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
|++.+.||+|++|.||+|.+..+++.||+|++.... ......+.+|++++++++|+|++++++++... ..+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 678899999999999999998889999999997553 33446788999999999999999999996532 1378999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||++ ++|.+++.... ..+++.+++.++.||+.|++|||+. +++|+||+|+||++++++.+||+|
T Consensus 78 v~e~~~-~~l~~~~~~~~----------~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d 143 (287)
T cd07840 78 VFEYMD-HDLTGLLDSPE----------VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLAD 143 (287)
T ss_pred Eecccc-ccHHHHHhccC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcc
Confidence 999996 58988886543 2688999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.+......... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..........
T Consensus 144 ~g~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~~~~~~~~ 218 (287)
T cd07840 144 FGLARPYTKRNSA---DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQLEKIFELC 218 (287)
T ss_pred ccceeeccCCCcc---cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHh
Confidence 9999866543211 1122346788999998765 45789999999999999999999998632110 0000000000
Q ss_pred hhh-hhhhhccccccCcch--hhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDH-VIDIVDPILINDVED--WDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~-~~~~~d~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... ...+.+......... ........+.. .....++.++.+++.+||+.+|++||+++++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 219 GSPTDENWPGVSKLPWFENLKPKKPYKRRLRE---FFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred CCCchhhccccccchhhhhccccccchhHHHH---HhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 000000000000000 00000000000 001114778999999999999999999999976
No 356
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=7.8e-33 Score=296.85 Aligned_cols=243 Identities=24% Similarity=0.318 Sum_probs=186.8
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHH-hcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALK-NIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~-~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+.||+|+||.||+|.+..+++.||+|+++.... .....+..|..++. ..+|+|++++++++. .++..++|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEEEE
Confidence 578999999999999988999999999864322 11233445555444 448999999999854 447899999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||
T Consensus 77 e~~~~~~L~~~l~~~~-----------~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 142 (260)
T cd05611 77 EYLNGGDCASLIKTLG-----------GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFG 142 (260)
T ss_pred eccCCCCHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecc
Confidence 9999999999986542 578899999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH 904 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 904 (988)
++..... .....++..|+|||.+.+..++.++||||||+++|||++|..||..... ...........
T Consensus 143 ~~~~~~~--------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~ 209 (260)
T cd05611 143 LSRNGLE--------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFDNILSRR 209 (260)
T ss_pred cceeccc--------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcc
Confidence 9875432 1123478899999999888889999999999999999999999863211 11100000000
Q ss_pred hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 905 VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 905 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
. .| .......++..+.+++.+||+.+|++||++.++.+.
T Consensus 210 ~-------------~~-----------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 210 I-------------NW-----------PEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred c-------------CC-----------CCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 0 00 000112467789999999999999999987655443
No 357
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1e-32 Score=301.72 Aligned_cols=279 Identities=24% Similarity=0.278 Sum_probs=196.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
++|++.+.||+|++|.||+|.+..+++.||+|.++.... ...+.+.+|++++++++||||+++++++. .+...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence 578999999999999999999988999999999864322 23467889999999999999999999954 45789
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-CCcEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN-DMIAH 819 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~k 819 (988)
++||||++ +++.+++..... ..+++..+..++.||+.||+|||++ +++||||+|+||+++. ++.+|
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~---------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~k 143 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPD---------FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALK 143 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCC---------CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEE
Confidence 99999994 688887754331 2357788899999999999999998 9999999999999985 56799
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||++........ ......++..|+|||++.+ ..++.++||||+||++|+|+||+.||......+ .+....
T Consensus 144 l~dfg~~~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~- 217 (294)
T PLN00009 144 LADFGLARAFGIPVR----TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIF- 217 (294)
T ss_pred EcccccccccCCCcc----ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-
Confidence 999999975433211 1112347889999998866 457899999999999999999999986321110 000000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
...........+.. .+..++...................++++.+++.+|++.+|++||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 218 RILGTPNEETWPGV--TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred HHhCCCChhhcccc--ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000000 00000000000000000001123456778999999999999999999999863
No 358
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.1e-32 Score=300.65 Aligned_cols=278 Identities=24% Similarity=0.281 Sum_probs=197.1
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhc---CCCCceEEEeecccccccCCCc
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNI---RHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~~~~~~~~~~ 739 (988)
|++.+.||+|+||.||+|+++.+++.||+|+++.... .....+.+|+.+++++ .|+|++++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 6778999999999999999988899999999974322 2234566788777666 5999999999977653333345
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.+++|||+. ++|.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||++++++.+|
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~---------~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~ 147 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK---------PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVK 147 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC---------CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEE
Confidence 899999995 589888865431 2588999999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|+|||.+......... ....++..|+|||++.+..++.++|||||||++|||++|++||...... ..+......
T Consensus 148 l~dfg~~~~~~~~~~~-----~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~ 221 (287)
T cd07838 148 IADFGLARIYSFEMAL-----TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDV 221 (287)
T ss_pred EeccCcceeccCCccc-----ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHH
Confidence 9999999765433211 1234788999999999989999999999999999999999998632111 011111100
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
........+.... ......+. ..............+..+.+++.+||+.||++||+++|++.
T Consensus 222 ~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 222 IGLPSEEEWPRNV-SLPRSSFP----SYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCChHhcCCCc-ccchhhcc----cccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000000000000 00000000 00000001111244577889999999999999999999875
No 359
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.3e-33 Score=308.51 Aligned_cols=283 Identities=22% Similarity=0.251 Sum_probs=199.1
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccc-cCCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDF-QGND 738 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 738 (988)
.++|.+.+.||+|+||.||+|++..+|+.||+|+++.. .......+.+|++++++++||||+++++++..... ....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999999889999999998643 22233568899999999999999999998754311 1224
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++|+||+. .++.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+
T Consensus 94 ~~~lv~e~~~-~~l~~~~~-------------~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~ 156 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG-------------HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCEL 156 (342)
T ss_pred eEEEEecccc-cCHHHHHc-------------CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCE
Confidence 5689999994 57766542 2578889999999999999999998 99999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
||+|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.... .....
T Consensus 157 kL~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~-----~~~~~ 224 (342)
T cd07879 157 KILDFGLARHADAE-------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-----YLDQL 224 (342)
T ss_pred EEeeCCCCcCCCCC-------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHH
Confidence 99999998754321 112357889999999876 468899999999999999999999986321 11111
Q ss_pred HHHHhh---hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH--HHHHH
Q 001974 898 RTALLD---HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE--LQSVK 972 (988)
Q Consensus 898 ~~~~~~---~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~i~ 972 (988)
...... ...++.+.........+........+..........+.++.+++.+||+.||++||+++|++.. ++.++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 225 TQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 110000 0000000000000000000000000000000012355678999999999999999999999954 66665
Q ss_pred H
Q 001974 973 N 973 (988)
Q Consensus 973 ~ 973 (988)
.
T Consensus 305 ~ 305 (342)
T cd07879 305 D 305 (342)
T ss_pred c
Confidence 4
No 360
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.8e-32 Score=293.05 Aligned_cols=248 Identities=30% Similarity=0.398 Sum_probs=201.8
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|++|.||+|+...+++.||+|.+..... ...+.+.+|++++++++|+|++++++++. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 47889999999999999999988899999999975543 34567899999999999999999999854 347889
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++.... .+++..+..++.|++.|+.|||+. +|+||||+|+||+++.++.++|+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~-----------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~ 141 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG-----------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLA 141 (254)
T ss_pred EEEecCCCCcHHHHHHhcc-----------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEe
Confidence 9999999999999986542 689999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.+......... .....++..|+|||...+..++.++||||+|+++|+|++|+.||.... ....... .
T Consensus 142 d~~~~~~~~~~~~~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~~~-~- 211 (254)
T cd06627 142 DFGVATKLNDVSKD----DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAALFR-I- 211 (254)
T ss_pred ccccceecCCCccc----ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHH-H-
Confidence 99999866543221 122457889999999888888999999999999999999999986321 0000000 0
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. ......+...+..+.+++.+||..+|++|||+.|++.
T Consensus 212 ---~~-----------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 212 ---VQ-----------------------DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ---hc-----------------------cCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 00 0000112245678999999999999999999999874
No 361
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.6e-33 Score=324.88 Aligned_cols=281 Identities=19% Similarity=0.195 Sum_probs=188.2
Q ss_pred hCCCCCCceeccccceeEEEEEECCCC-eEEEEE------------------EeeccccchhHHHHHHHHHHHhcCCCCc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDG-TIVAIK------------------VFNLQRHGASKSFLAECKALKNIRHRNL 722 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~-~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~h~ni 722 (988)
.++|++++.||+|+||+||++..+... ..++.| .++ ........+.+|+.++++++||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCc
Confidence 468999999999999999998764322 122222 111 111234568899999999999999
Q ss_pred eEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEe
Q 001974 723 VKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLH 802 (988)
Q Consensus 723 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 802 (988)
+++++++. .++..++|+|++ ++++.+++........ ......++..|+.||+.||+|||++ +|||
T Consensus 226 v~l~~~~~-----~~~~~~lv~e~~-~~~l~~~l~~~~~~~~------~~~~~~~~~~i~~ql~~aL~yLH~~---gIiH 290 (501)
T PHA03210 226 LKIEEILR-----SEANTYMITQKY-DFDLYSFMYDEAFDWK------DRPLLKQTRAIMKQLLCAVEYIHDK---KLIH 290 (501)
T ss_pred CcEeEEEE-----ECCeeEEEEecc-ccCHHHHHhhcccccc------ccccHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 99999954 347789999999 5778877754432111 1234567888999999999999998 9999
Q ss_pred ccCCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCC
Q 001974 803 CDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKP 882 (988)
Q Consensus 803 ~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p 882 (988)
|||||+|||++.++.+||+|||+++........ ......||..|+|||++.+..++.++|||||||++|||++|..+
T Consensus 291 rDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 291 RDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA---FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred CCCCHHHEEECCCCCEEEEeCCCceecCccccc---ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999865432211 12235689999999999999999999999999999999998754
Q ss_pred -CCccccCCcchHHHHHHHHhhh--hhhhhccccccCcchhhhhhHHHH-----hhhhhccccchhHHHHHHhhcccCcC
Q 001974 883 -TDVMFEGDLNLHNYARTALLDH--VIDIVDPILINDVEDWDATNKQRL-----RQAKINGKIECPISMVRIGVACSVES 954 (988)
Q Consensus 883 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~cl~~d 954 (988)
+...... ...........-. ..++.+.. ..-|.......+ ...........+..+.+++.+|++.|
T Consensus 368 p~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~D 441 (501)
T PHA03210 368 PIGDGGGK--PGKQLLKIIDSLSVCDEEFPDPP----CKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFD 441 (501)
T ss_pred CccCCCCC--HHHHHHHHHHhcccChhhcCCcH----HHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccC
Confidence 3321111 1111110000000 00000000 000000000000 00000011235567888999999999
Q ss_pred CCCCCCHHHHHHH
Q 001974 955 PQDRMSITNVVHE 967 (988)
Q Consensus 955 P~~RPs~~evl~~ 967 (988)
|++|||+.|+++.
T Consensus 442 P~~Rpsa~elL~h 454 (501)
T PHA03210 442 WHLRPGAAELLAL 454 (501)
T ss_pred cccCcCHHHHhhC
Confidence 9999999999864
No 362
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.4e-32 Score=292.95 Aligned_cols=254 Identities=25% Similarity=0.355 Sum_probs=203.6
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|+..+.||+|++|.||+|....+++.|++|++..... ...+.+.+|++++++++||||+++++.+... .....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE---EKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---CCCeEE
Confidence 47788999999999999999988899999999875442 4457889999999999999999999986432 126789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+|+||+++++|.+++.... .+++.+++.++.|++.|++|||+. +++||||+|+||+++.++.++|+
T Consensus 78 lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~ 143 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG-----------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLA 143 (260)
T ss_pred EEEEecCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEc
Confidence 9999999999999986543 688999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||.+......... .......++..|+|||...+...+.++||||||+++|+|++|..||.... ......
T Consensus 144 d~~~~~~~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~---- 213 (260)
T cd06606 144 DFGCAKRLGDIETG--EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAAL---- 213 (260)
T ss_pred ccccEEeccccccc--ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHH----
Confidence 99999866543321 01123458889999999988889999999999999999999999987432 000000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
...... ......+...+..+.+++.+|++.+|++||++.|+++
T Consensus 214 ----~~~~~~------------------~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 214 ----YKIGSS------------------GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred ----Hhcccc------------------CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 000000 0001112245678999999999999999999999986
No 363
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=7.6e-33 Score=297.93 Aligned_cols=248 Identities=25% Similarity=0.383 Sum_probs=193.3
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
||+|+||.||+|++..+|+.||+|++..... ...+.+.+|++++++++||||+++++.+ ..+...++||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999988899999999864433 3456788999999999999999998874 3457899999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||++++++.++|+|||++.
T Consensus 76 ~~~~L~~~l~~~~-----------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~ 141 (265)
T cd05579 76 PGGDLASLLENVG-----------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSK 141 (265)
T ss_pred CCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccch
Confidence 9999999986532 578999999999999999999998 99999999999999999999999999987
Q ss_pred ccccccccc----ceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhh
Q 001974 828 VRQEVSNLT----QSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 828 ~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
......... ........++..|+|||......++.++||||||+++||+++|+.||..... ......
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~---- 212 (265)
T cd05579 142 VGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQN---- 212 (265)
T ss_pred hcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH----
Confidence 543321100 1112234578899999999888899999999999999999999999863211 011100
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHEL 968 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 968 (988)
+.. .. ..| ......+..+.+++.+||+.+|++|||+.++.+.|
T Consensus 213 -~~~-------~~-~~~-------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 213 -ILN-------GK-IEW-------------PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred -Hhc-------CC-cCC-------------CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 000 00 000 00112367899999999999999999995555444
No 364
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.3e-32 Score=295.82 Aligned_cols=243 Identities=21% Similarity=0.268 Sum_probs=185.9
Q ss_pred eeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHH---HHHhcCCCCceEEEeecccccccCCCceEEE
Q 001974 670 LIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECK---ALKNIRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 670 ~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~---~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
.||+|+||.||+|.+..+++.||+|.+..... .....+..|.. .++...||+|+++++++. .++..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH-----TPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCEEEEE
Confidence 47999999999999988899999999864322 11122344443 344457999999998844 45789999
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDF 823 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 823 (988)
|||+++++|.+++.... .+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 76 ~e~~~g~~L~~~l~~~~-----------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~df 141 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG-----------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDL 141 (278)
T ss_pred EecCCCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccC
Confidence 99999999999886432 689999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 824 GLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 824 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
|++....... .....|+..|+|||++.++ .++.++||||+||++|||++|+.||......... .....
T Consensus 142 g~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~--~~~~~--- 210 (278)
T cd05606 142 GLACDFSKKK------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRM--- 210 (278)
T ss_pred cCccccCccC------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchH--HHHHH---
Confidence 9987543221 1123589999999998754 6899999999999999999999998643211100 00000
Q ss_pred hhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 903 DHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 903 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
........+...+.++.+++.+|+..+|++|| ++.|+++.
T Consensus 211 -------------------------~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 211 -------------------------TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred -------------------------hhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 00000111224567899999999999999999 99999853
No 365
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=9.6e-33 Score=295.51 Aligned_cols=250 Identities=23% Similarity=0.284 Sum_probs=200.7
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+|++.+.||+|+||.||++++..+++.+|+|.+.... ......+.+|++++++++|+||+++.+++. .+...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCEEE
Confidence 4888999999999999999998899999999987432 233457788999999999999999998854 348899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+++++|.+++...... ...+++..++.++.|++.||+|||+. +++||||+|+||++++++.+||+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~ 145 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKK-------RKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIG 145 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhh-------cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEe
Confidence 999999999999998653211 13688999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
|||++....... .....++..|+|||.+.+..++.++|+||+|+++|||++|+.||..... .......
T Consensus 146 d~g~~~~~~~~~------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~- 213 (256)
T cd08530 146 DLGISKVLKKNM------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM-----QDLRYKV- 213 (256)
T ss_pred eccchhhhccCC------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH-
Confidence 999998665431 1123478899999999998999999999999999999999999863211 0100000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. . .....+...+.++.+++.+|++.+|++||++.|+++
T Consensus 214 ~~-------~-------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 214 QR-------G-------------------KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred hc-------C-------------------CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 0 000111245677999999999999999999999975
No 366
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=287.44 Aligned_cols=277 Identities=21% Similarity=0.276 Sum_probs=205.0
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcC-C-C----CceEEEeeccccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIR-H-R----NLVKVITSCSSIDFQ 735 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~~~~~~~~~~~~ 735 (988)
+++|.++..+|+|.||.|-++.+..++..||||+++.. ....+..+-|+++++++. + | -++.+.+| |+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 67899999999999999999999888999999999743 234567788999999993 2 2 26667676 56
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN- 814 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 814 (988)
..++.|||+|.+ |.++.+++..+.. .+++..+++.|+.|++++++|||+. +++|-||||+||++.+
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~y---------~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss 228 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENNY---------IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSS 228 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCCc---------cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEecc
Confidence 679999999999 8899999988764 4789999999999999999999999 9999999999999932
Q ss_pred -------------------CCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHH
Q 001974 815 -------------------DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLE 875 (988)
Q Consensus 815 -------------------~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~e 875 (988)
+..++++|||.|+...+.. ...+.|..|+|||++.+-.++.++||||+||+|+|
T Consensus 229 ~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h-------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~E 301 (415)
T KOG0671|consen 229 EYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH-------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVE 301 (415)
T ss_pred ceEEEeccCCccceeccCCCcceEEEecCCcceeccCc-------ceeeeccccCCchheeccCcCCccCceeeeeEEEE
Confidence 2358999999998755433 23568999999999999999999999999999999
Q ss_pred HHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccc-----cccCcchhhhhhHHH-----Hhhhh-----hccccchh
Q 001974 876 MVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPI-----LINDVEDWDATNKQR-----LRQAK-----INGKIECP 940 (988)
Q Consensus 876 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-----l~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~ 940 (988)
+.||...|+.-.. .+-...+...+.+-...++... .....-+|+.....+ .+..+ ........
T Consensus 302 lytG~~LFqtHen--~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~ 379 (415)
T KOG0671|consen 302 LYTGETLFQTHEN--LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEH 379 (415)
T ss_pred eeccceecccCCc--HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHH
Confidence 9999999874321 1111122221111111111111 111122333222222 00000 00112334
Q ss_pred HHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 941 ISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 941 ~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.++.+|+++|+..||.+|+|+.|++.
T Consensus 380 ~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred hHHHHHHHHHHccCccccccHHHHhc
Confidence 56999999999999999999999875
No 367
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.8e-32 Score=298.25 Aligned_cols=276 Identities=24% Similarity=0.272 Sum_probs=199.0
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
|++.+.||+|++|.||+|....+++.+|+|+++.... .....+.+|++++++++|+||+++++++. .++..++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-----HKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-----cCCCEEE
Confidence 6778999999999999999988999999999864432 24567889999999999999999999854 4488999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
|+||++ +++.+++.... ..+++.++..++.|++.||+|||+. +|+||||||+||++++++.++|+|
T Consensus 76 v~e~~~-~~l~~~l~~~~----------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~d 141 (283)
T cd05118 76 VFEFMD-TDLYKLIKDRQ----------RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLAD 141 (283)
T ss_pred EEeccC-CCHHHHHHhhc----------ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEee
Confidence 999995 58888876543 2689999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.+........ ......++..|+|||.+.+. .++.++||||+|+++|+|+||+.||...... +.........
T Consensus 142 f~~~~~~~~~~~----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--~~~~~~~~~~ 215 (283)
T cd05118 142 FGLARSFGSPVR----PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI--DQLFKIFRTL 215 (283)
T ss_pred eeeeEecCCCcc----cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHc
Confidence 999976544321 11123578899999998876 7899999999999999999999998632110 0000000000
Q ss_pred hhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
......... ...........................++.++.+++.+||+.||.+||++.+++.
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 216 GTPDPEVWP-KFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CCCchHhcc-cchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000000 0000000000000000000000111246778999999999999999999999975
No 368
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2e-32 Score=305.41 Aligned_cols=279 Identities=22% Similarity=0.258 Sum_probs=199.4
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccc-cC
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDF-QG 736 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 736 (988)
...++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++..... ..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 35678999999999999999999998899999999985322 2234568899999999999999999998653211 11
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
....++||||+ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~------------~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~ 155 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE------------KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDC 155 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCC
Confidence 13468999999 78998887532 578899999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
.+||+|||++....... ....++..|+|||.+.+ ..++.++||||+||++|++++|+.||..... ...
T Consensus 156 ~~kl~dfg~~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~----~~~ 224 (343)
T cd07880 156 ELKILDFGLARQTDSEM-------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDH----LDQ 224 (343)
T ss_pred CEEEeecccccccccCc-------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHH
Confidence 99999999997543311 12347889999998876 4588999999999999999999999863211 111
Q ss_pred HHHHHHhh--h-hhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 896 YARTALLD--H-VIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 896 ~~~~~~~~--~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
....... . ..++...........+........+.........++.++.+++.+|++.||++|||+.++++
T Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 225 -LMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred -HHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000 0 00000000000000000000000000000112356677899999999999999999999984
No 369
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.5e-32 Score=306.54 Aligned_cols=286 Identities=21% Similarity=0.258 Sum_probs=198.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeeccccc--------
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSID-------- 733 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 733 (988)
..+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 367999999999999999999999899999999997666556678889999999999999999998755321
Q ss_pred -ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 734 -FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 734 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
+......++||||++ ++|.+++... .+++..++.++.||+.||+|||+. +|+||||||+||++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~------------~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili 147 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG------------PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFI 147 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEE
Confidence 111245789999995 6898887532 578899999999999999999998 99999999999999
Q ss_pred C-CCCcEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCC
Q 001974 813 D-NDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGD 890 (988)
Q Consensus 813 ~-~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~ 890 (988)
+ +++.+|++|||.++......... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||......+
T Consensus 148 ~~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~ 226 (342)
T cd07854 148 NTEDLVLKIGDFGLARIVDPHYSHK-GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE 226 (342)
T ss_pred cCCCceEEECCcccceecCCccccc-cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 7 45678999999997653321111 11112347889999998654 567889999999999999999999986432110
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
............ ..+........ .......................+.++.+++.+||+.||++|||+.|+++.
T Consensus 227 -~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 227 -QMQLILESVPVV-REEDRNELLNV-IPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred -HHHHHHHhcCCC-ChHHhhhhhhh-hhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000000000000 00000000000 000000000000000001112456778999999999999999999999853
No 370
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.8e-32 Score=298.80 Aligned_cols=257 Identities=22% Similarity=0.269 Sum_probs=197.3
Q ss_pred CCCCCceeccccceeEEEEEEC---CCCeEEEEEEeeccc----cchhHHHHHHHHHHHhc-CCCCceEEEeeccccccc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFD---QDGTIVAIKVFNLQR----HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 735 (988)
+|++.+.||+|++|.||+|+.. .+++.||+|+++... ....+.+.+|++++.++ +||+|+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 4778899999999999999863 367889999986432 22345688999999999 699999999874 4
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.+...++||||+++++|.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||+++.+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~ 141 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQRE-----------HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSE 141 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcC-----------CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCC
Confidence 4578899999999999999986432 578889999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCCC--CCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSE--VSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
+.++|+|||+++........ ......|+..|+|||.+.+.. .+.++||||||+++|||++|..||...... ...
T Consensus 142 ~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~ 217 (288)
T cd05583 142 GHVVLTDFGLSKEFLAEEEE---RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQ 217 (288)
T ss_pred CCEEEEECcccccccccccc---ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chH
Confidence 99999999998765432211 112245789999999987655 788999999999999999999998531110 001
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
..... .+.. .....+...+..+.+++.+||+.||++|||+.++.+.|+..
T Consensus 218 ~~~~~-----~~~~-----------------------~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 218 SEISR-----RILK-----------------------SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred HHHHH-----HHHc-----------------------cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 01100 0000 00111224567789999999999999999998887766543
No 371
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8.3e-32 Score=296.65 Aligned_cols=245 Identities=25% Similarity=0.338 Sum_probs=191.5
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
|...+.||+|+||+||+|++..+++.||+|++..... .....+.+|+++++.++|||++++++++.. +...+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-----EHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEEE
Confidence 5667889999999999999988999999999864322 233567889999999999999999999644 47789
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||+ .+++.+++.... .++++.++..++.||+.|++|||+. +++||||+|+||+++.++.+||+
T Consensus 98 lv~e~~-~~~l~~~l~~~~----------~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~ 163 (313)
T cd06633 98 LVMEYC-LGSASDLLEVHK----------KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLA 163 (313)
T ss_pred EEEecC-CCCHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEe
Confidence 999999 467777775433 3588999999999999999999998 99999999999999999999999
Q ss_pred eecccccccccccccceeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|||.+...... ....|+..|+|||++. ...++.++|||||||++|||++|..||..... .....
T Consensus 164 dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~ 230 (313)
T cd06633 164 DFGSASKSSPA--------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALY 230 (313)
T ss_pred ecCCCcccCCC--------CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHH
Confidence 99998643211 1245888999999974 45688899999999999999999999753211 00000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
....... +. ......+..+.+++.+||+.+|.+||++.++++.
T Consensus 231 ~~~~~~~-----~~---------------------~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 231 HIAQNDS-----PT---------------------LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred HHHhcCC-----CC---------------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 00 0011345678999999999999999999999864
No 372
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.4e-32 Score=298.59 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=201.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcC-CCCceEEEeecccccccCCC
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 738 (988)
++|.+.+.||+|+||.||+|+...+++.||+|++... .....+.+..|++++++++ ||||+++++++ ..++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cCCc
Confidence 4788999999999999999999989999999998642 2233467889999999998 99999999884 4457
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~ 141 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG-----------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHI 141 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCE
Confidence 8999999999999999997543 689999999999999999999998 99999999999999999999
Q ss_pred EEeeeccccccccccccc----------------ceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCC
Q 001974 819 HVGDFGLARVRQEVSNLT----------------QSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKP 882 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p 882 (988)
+++|||++.......... ........++..|+|||...+..++.++||||||+++|++++|+.|
T Consensus 142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p 221 (280)
T cd05581 142 KITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP 221 (280)
T ss_pred EecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCC
Confidence 999999998654432110 0112234578899999999888899999999999999999999999
Q ss_pred CCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH-
Q 001974 883 TDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI- 961 (988)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~- 961 (988)
|..... . ... +.+. ......+...++.+.+++.+||+.+|++||++
T Consensus 222 ~~~~~~----~-~~~-----~~~~-----------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 268 (280)
T cd05581 222 FRGSNE----Y-LTF-----QKIL-----------------------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVN 268 (280)
T ss_pred CCCccH----H-HHH-----HHHH-----------------------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcc
Confidence 874310 0 000 0000 00111223457789999999999999999999
Q ss_pred ---HHHHH
Q 001974 962 ---TNVVH 966 (988)
Q Consensus 962 ---~evl~ 966 (988)
+|+++
T Consensus 269 ~~~~~ll~ 276 (280)
T cd05581 269 EGYDELKA 276 (280)
T ss_pred cCHHHHhc
Confidence 66654
No 373
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.4e-32 Score=300.62 Aligned_cols=255 Identities=20% Similarity=0.287 Sum_probs=193.5
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 738 (988)
..++|++.+.||+|+||.||+|.+..+++.||||+++... ......+..|+.++.+. .||||+++++++.. +.
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~ 87 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-----DS 87 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-----CC
Confidence 3467899999999999999999998789999999997433 23345567788777777 59999999999643 47
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+ ++++.+++.... ..+++..+..++.|++.|++|||+. .+|+||||+|+||++++++.+
T Consensus 88 ~~~~v~e~~-~~~l~~l~~~~~----------~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~ 154 (296)
T cd06618 88 DVFICMELM-STCLDKLLKRIQ----------GPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNV 154 (296)
T ss_pred eEEEEeecc-CcCHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCE
Confidence 899999998 557776664422 2588899999999999999999973 289999999999999999999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCC----CCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSE----VSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
||+|||++......... ....++..|+|||++.+.. ++.++||||||+++|||++|+.||...... .
T Consensus 155 kL~dfg~~~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~- 225 (296)
T cd06618 155 KLCDFGISGRLVDSKAK-----TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE---F- 225 (296)
T ss_pred EECccccchhccCCCcc-----cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH---H-
Confidence 99999998765432211 1234788999999987653 788999999999999999999998632111 0
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.... ....... .. ......++.++.+++.+||+.||++||++.++++.
T Consensus 226 ~~~~--------~~~~~~~----~~-------------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 226 EVLT--------KILQEEP----PS-------------LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred HHHH--------HHhcCCC----CC-------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 0000000 00 00111356789999999999999999999999765
No 374
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.5e-32 Score=303.11 Aligned_cols=200 Identities=21% Similarity=0.303 Sum_probs=161.6
Q ss_pred ceeccc--cceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEE
Q 001974 669 HLIGMG--SFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 669 ~~lg~G--~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
..||+| +||+||+|++..+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++. .++..++|+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEEEE
Confidence 456666 89999999998899999999987433 233467889999999999999999999954 457889999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||+.++++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+
T Consensus 79 e~~~~~~l~~~l~~~~~---------~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~ 146 (328)
T cd08226 79 PFMAYGSANSLLKTYFP---------EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLS 146 (328)
T ss_pred ecccCCCHHHHHHhhcc---------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechH
Confidence 99999999999876432 2578899999999999999999998 99999999999999999999999998
Q ss_pred ccccccccccccc---eeccccccccccccCcccCCC--CCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 825 LARVRQEVSNLTQ---SCSVGVRGTIGYAAPEYGLGS--EVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 825 ~a~~~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
.+........... .......++..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 147 HLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQD 212 (328)
T ss_pred HHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 6543322111000 000112356779999998763 478999999999999999999999864
No 375
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3e-32 Score=301.06 Aligned_cols=269 Identities=19% Similarity=0.205 Sum_probs=188.4
Q ss_pred cceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeeccccch
Q 001974 675 SFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSL 752 (988)
Q Consensus 675 ~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL 752 (988)
++|.||.++...+++.||+|+++.. .....+.+.+|+++++.++|+||+++++++. ..+..+++|||+++++|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~-----~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFI-----VDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheee-----cCCeEEEEEeccCCCCH
Confidence 4455666666668999999998754 3344568999999999999999999999853 45788999999999999
Q ss_pred hhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeeccccccccc
Q 001974 753 ENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEV 832 (988)
Q Consensus 753 ~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 832 (988)
.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+......
T Consensus 87 ~~~l~~~~~---------~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~ 154 (314)
T cd08216 87 EDLLKTHFP---------EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKH 154 (314)
T ss_pred HHHHHHhcc---------cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeeccc
Confidence 999875432 2578888999999999999999998 9999999999999999999999999988754322
Q ss_pred ccc---cceeccccccccccccCcccCC--CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhh
Q 001974 833 SNL---TQSCSVGVRGTIGYAAPEYGLG--SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVID 907 (988)
Q Consensus 833 ~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (988)
... .........++..|+|||++.. ..++.++|||||||++|||++|+.||....... ... .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~----~~~-~~~~~~~~~ 229 (314)
T cd08216 155 GKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ----MLL-EKVRGTVPC 229 (314)
T ss_pred cccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH----HHH-HHHhccCcc
Confidence 111 0111123457788999999876 357899999999999999999999987431111 111 011101111
Q ss_pred hhccccccC----cc----hhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 908 IVDPILIND----VE----DWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 908 ~~d~~l~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.++...... .. .+.... ...............++.+++.+||+.||++|||++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 230 LLDKSTYPLYEDSMSQSRSSNEHPN--NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred ccccCchhhhcCCcCcccccccccc--hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 111000000 00 000000 00000111122345678899999999999999999999874
No 376
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=6.4e-33 Score=309.58 Aligned_cols=283 Identities=21% Similarity=0.249 Sum_probs=199.6
Q ss_pred HhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccc-cC
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDF-QG 736 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~ 736 (988)
...++|++.+.||+|++|.||+|++..+++.||+|++... .....+.+.+|+.++++++|||++++++++..... ..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3467899999999999999999999889999999998642 22334567789999999999999999887543211 22
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
....++|+||+ +++|.+++.. .++++.++..++.|++.||+|||+. +|+||||||+||++++++
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~------------~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~ 155 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC------------QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDC 155 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCC
Confidence 23489999999 7899998864 2588999999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHN 895 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~ 895 (988)
.+||+|||++...... .....++..|+|||.+.+ ..++.++||||+||++||+++|+.||...... ....
T Consensus 156 ~~kL~dfg~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--~~~~ 226 (343)
T cd07851 156 ELKILDFGLARHTDDE-------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--DQLK 226 (343)
T ss_pred CEEEcccccccccccc-------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHH
Confidence 9999999999865332 122357889999998765 46788999999999999999999998632110 0000
Q ss_pred HHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 896 YARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 896 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
............+...........+........+..........+.++.+++.+||+.||++|||+.|+++.
T Consensus 227 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 227 RIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000000000000000000000000000000000112346789999999999999999999999763
No 377
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.2e-32 Score=299.38 Aligned_cols=249 Identities=25% Similarity=0.333 Sum_probs=193.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
+.|+..+.||+|+||.||+|++..+++.||+|.+... .....+++.+|+++++.++|+|++++++++.. +..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCe
Confidence 3477788999999999999999888999999998632 22334567889999999999999999998643 477
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.++||||+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~----------~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~k 155 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHK----------KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVK 155 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcC----------CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEE
Confidence 899999995 68877765332 2578899999999999999999998 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~ 896 (988)
|+|||++...... ....++..|+|||.+. ...++.++|||||||++|||++|+.||...... ..
T Consensus 156 l~dfg~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~ 222 (308)
T cd06634 156 LGDFGSASIMAPA--------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SA 222 (308)
T ss_pred ECCcccceeecCc--------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-----HH
Confidence 9999998754321 1234788999999874 356788999999999999999999997532100 00
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
... .... ..+. ......+..+.+++.+||+.+|++||+++++++.-.
T Consensus 223 ~~~-~~~~----~~~~---------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 223 LYH-IAQN----ESPA---------------------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred HHH-Hhhc----CCCC---------------------cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 000 0000 0000 001245667899999999999999999999987643
No 378
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.7e-32 Score=295.67 Aligned_cols=275 Identities=22% Similarity=0.250 Sum_probs=195.1
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcC-CCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
|++.+.||+|++|+||+|+...+++.||+|.+..... .......+|+..+++++ |+|++++++++.. ++..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEEE
Confidence 6778999999999999999988899999999864332 12234567999999998 9999999998543 588999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||+ +|+|.+++..... ..+++.++..++.|++.||+|||+. +++|+||+|+||++++++.++|+|
T Consensus 76 v~e~~-~~~l~~~~~~~~~---------~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d 142 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKG---------KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIAD 142 (283)
T ss_pred EEecC-CCCHHHHHHhccc---------ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEee
Confidence 99999 8899988865431 3689999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.+......... ....++..|+|||++.. ..++.++||||||+++|||++|+.||......+ .........
T Consensus 143 ~~~~~~~~~~~~~-----~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~--~~~~~~~~~ 215 (283)
T cd07830 143 FGLAREIRSRPPY-----TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID--QLYKICSVL 215 (283)
T ss_pred cccceeccCCCCc-----CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH--HHHHHHHhc
Confidence 9999765432221 12347889999998754 567899999999999999999999986431110 000000000
Q ss_pred hhhhhh-hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDHVID-IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.....+ +.+.........+.. ...............+..+.+++.+||+.||++|||++|++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 216 GTPTKQDWPEGYKLASKLGFRF--PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred CCCChhhhhhHhhhhccccccc--cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000000 000000000000000 000000000001123577999999999999999999999875
No 379
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.6e-32 Score=301.34 Aligned_cols=285 Identities=23% Similarity=0.250 Sum_probs=198.0
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--chhHHHHHHHHHHHhcCCCCceEEEeecccccc---cC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--GASKSFLAECKALKNIRHRNLVKVITSCSSIDF---QG 736 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~ 736 (988)
.++|++.+.||+|+||.||+|++..+++.||+|++..... .....+.+|++++++++||||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 4789999999999999999999998999999999864322 223467889999999999999999987654311 22
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
....++|+||+. +++.+.+.... ..+++.++..++.|+++||+|||+. +|+||||||+||++++++
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~----------~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~ 152 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPS----------VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQG 152 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccc----------cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCC
Confidence 346799999995 56777665432 2689999999999999999999998 999999999999999999
Q ss_pred cEEEeeecccccccccccccc-------eeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCcccc
Q 001974 817 IAHVGDFGLARVRQEVSNLTQ-------SCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFE 888 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~ 888 (988)
.++|+|||+++.......... .......+++.|+|||.+.+ ..++.++|||||||++|||++|++||.....
T Consensus 153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~ 232 (311)
T cd07866 153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD 232 (311)
T ss_pred CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999999986543221111 11123457888999998765 4578999999999999999999999863211
Q ss_pred CCcchHHHHHHHHhhh-hhhhhccccccCcchhh--hhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 889 GDLNLHNYARTALLDH-VIDIVDPILINDVEDWD--ATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 889 ~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
. ............. ...+.+........++. ........ .........+.+++.+|++.||++|||+.|++
T Consensus 233 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell 306 (311)
T cd07866 233 I--DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLE----ERFGKLGPEGLDLLSKLLSLDPYKRLTASDAL 306 (311)
T ss_pred H--HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHH----HHcccCChhHHHHHHHHcccCcccCcCHHHHh
Confidence 1 0000000000000 00000000000000000 00000000 01123446789999999999999999999987
Q ss_pred H
Q 001974 966 H 966 (988)
Q Consensus 966 ~ 966 (988)
.
T Consensus 307 ~ 307 (311)
T cd07866 307 E 307 (311)
T ss_pred c
Confidence 5
No 380
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.6e-32 Score=295.17 Aligned_cols=253 Identities=22% Similarity=0.301 Sum_probs=194.0
Q ss_pred CCCCCceeccccceeEEEEEEC---CCCeEEEEEEeeccc----cchhHHHHHHHHHHHhc-CCCCceEEEeeccccccc
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFD---QDGTIVAIKVFNLQR----HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~---~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 735 (988)
+|++.+.||+|+||.||.|... .+|+.||+|+++... ....+.+.+|+++++++ +|++|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4788899999999999999874 478899999986432 22335678899999999 699999999884 3
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.+...++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||+|+||+++.+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~-----------~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~ 141 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRE-----------RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSN 141 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCC
Confidence 4578899999999999999986542 578889999999999999999998 99999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCCC--CCCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS--EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
+.+||+|||++......... ......|+..|+|||.+.+. .++.++||||||+++|+|++|+.||...... ...
T Consensus 142 ~~~kl~dfg~~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~ 217 (290)
T cd05613 142 GHVVLTDFGLSKEFHEDEVE---RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQ 217 (290)
T ss_pred CCEEEeeCccceeccccccc---ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccH
Confidence 99999999999765332211 11224588999999998753 4678999999999999999999998632111 011
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC-----CHHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM-----SITNVVHE 967 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 967 (988)
..... .+.. .....+..+++.+.+++.+||+.||++|| +++++++.
T Consensus 218 ~~~~~-----~~~~-----------------------~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 218 AEISR-----RILK-----------------------SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHH-----Hhhc-----------------------cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 11110 0000 00011234567789999999999999997 66777653
No 381
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.9e-33 Score=319.94 Aligned_cols=259 Identities=22% Similarity=0.294 Sum_probs=205.7
Q ss_pred HHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccc
Q 001974 656 ESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSI 732 (988)
Q Consensus 656 ~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 732 (988)
.++....++|+++++||+|+||.|..++.+.+++.||+|++... ......-|..|-.+|..-..+=|+.+..+
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA---- 143 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA---- 143 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH----
Confidence 34455668899999999999999999999999999999999752 34455679999999988888888887765
Q ss_pred cccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 733 DFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 733 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
|+++.+.|+|||||+||+|-.++.... ++++..++.++..|+.||+-+|+. |+|||||||+|||+
T Consensus 144 -FQD~~~LYlVMdY~pGGDlltLlSk~~-----------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLl 208 (1317)
T KOG0612|consen 144 -FQDERYLYLVMDYMPGGDLLTLLSKFD-----------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLL 208 (1317)
T ss_pred -hcCccceEEEEecccCchHHHHHhhcC-----------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEe
Confidence 788899999999999999999998764 589999999999999999999999 99999999999999
Q ss_pred CCCCcEEEeeecccccccccccccceeccccccccccccCcccCC-----CCCCCccchHHHHHHHHHHHhCCCCCCccc
Q 001974 813 DNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-----SEVSTNGDIYSYGILLLEMVTGKKPTDVMF 887 (988)
Q Consensus 813 ~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~~ 887 (988)
|..|++||+|||.+.......... ....+|||.|.+||+++. +.|+..+|.||+||++|||+.|..||...
T Consensus 209 d~~GHikLADFGsClkm~~dG~V~---s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad- 284 (1317)
T KOG0612|consen 209 DKSGHIKLADFGSCLKMDADGTVR---SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD- 284 (1317)
T ss_pred cccCcEeeccchhHHhcCCCCcEE---eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-
Confidence 999999999999998776544322 233579999999999763 56899999999999999999999998521
Q ss_pred cCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC---HHHH
Q 001974 888 EGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS---ITNV 964 (988)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~ev 964 (988)
.++.-... +...-+. +.. +...+++.+..+||.+.+. +|+.|.. ++|+
T Consensus 285 ----slveTY~K-----Im~hk~~----------------l~F---P~~~~VSeeakdLI~~ll~-~~e~RLgrngiedi 335 (1317)
T KOG0612|consen 285 ----SLVETYGK-----IMNHKES----------------LSF---PDETDVSEEAKDLIEALLC-DREVRLGRNGIEDI 335 (1317)
T ss_pred ----HHHHHHHH-----Hhchhhh----------------cCC---CcccccCHHHHHHHHHHhc-ChhhhcccccHHHH
Confidence 11111111 1110000 000 0113577888999998764 8888887 8777
Q ss_pred HH
Q 001974 965 VH 966 (988)
Q Consensus 965 l~ 966 (988)
..
T Consensus 336 k~ 337 (1317)
T KOG0612|consen 336 KN 337 (1317)
T ss_pred Hh
Confidence 64
No 382
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.98 E-value=7.3e-32 Score=300.58 Aligned_cols=279 Identities=22% Similarity=0.269 Sum_probs=196.1
Q ss_pred hCCCCC-CceeccccceeEEEEEECCCCeEEEEEEeeccccch--------------hHHHHHHHHHHHhcCCCCceEEE
Q 001974 662 TDGFSS-THLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA--------------SKSFLAECKALKNIRHRNLVKVI 726 (988)
Q Consensus 662 ~~~y~~-~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~~~ 726 (988)
.++|.. .+.||+|+||+||+|.+..+++.||+|+++...... ...+.+|++++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 456764 467999999999999998899999999986432211 12577899999999999999999
Q ss_pred eecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCC
Q 001974 727 TSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLK 806 (988)
Q Consensus 727 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 806 (988)
+++. .++..++||||+. ++|.+++.... .+++..+..++.|++.||+|||+. +++||||+
T Consensus 87 ~~~~-----~~~~~~lv~e~~~-~~l~~~l~~~~-----------~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~ 146 (335)
T PTZ00024 87 DVYV-----EGDFINLVMDIMA-SDLKKVVDRKI-----------RLTESQVKCILLQILNGLNVLHKW---YFMHRDLS 146 (335)
T ss_pred EEEe-----cCCcEEEEEeccc-cCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccc
Confidence 9854 4478999999995 79998886432 588999999999999999999998 99999999
Q ss_pred CCCeeeCCCCcEEEeeecccccccccccc----------cceeccccccccccccCcccCCC-CCCCccchHHHHHHHHH
Q 001974 807 PGNVLLDNDMIAHVGDFGLARVRQEVSNL----------TQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLE 875 (988)
Q Consensus 807 p~NIll~~~~~~kL~DfG~a~~~~~~~~~----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~e 875 (988)
|+||+++.++.+||+|||.+......... .........++..|+|||.+.+. .++.++||||+||++||
T Consensus 147 ~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e 226 (335)
T PTZ00024 147 PANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAE 226 (335)
T ss_pred HHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999765411100 00111123467889999998764 46899999999999999
Q ss_pred HHhCCCCCCccccCCcchHHHHHHHHhhhhhh-hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcC
Q 001974 876 MVTGKKPTDVMFEGDLNLHNYARTALLDHVID-IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVES 954 (988)
Q Consensus 876 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 954 (988)
|++|+.||...... ................ +.+.........+........ .......+.++.+++.+||+.+
T Consensus 227 l~tg~~p~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~ 300 (335)
T PTZ00024 227 LLTGKPLFPGENEI--DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDL----KTIFPNASDDAIDLLQSLLKLN 300 (335)
T ss_pred HHhCCCCCCCCCHH--HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccH----HHhCcCCChHHHHHHHHHcCCC
Confidence 99999998632111 1001110000000000 000000000000000000000 0112245677899999999999
Q ss_pred CCCCCCHHHHHH
Q 001974 955 PQDRMSITNVVH 966 (988)
Q Consensus 955 P~~RPs~~evl~ 966 (988)
|++|||++|++.
T Consensus 301 P~~R~s~~~~l~ 312 (335)
T PTZ00024 301 PLERISAKEALK 312 (335)
T ss_pred chhccCHHHHhc
Confidence 999999999986
No 383
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=3.4e-34 Score=277.36 Aligned_cols=253 Identities=26% Similarity=0.347 Sum_probs=195.0
Q ss_pred CCceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEEEE
Q 001974 667 STHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 667 ~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
-...||.|+||+|++-.++.+|+..|||+++.... ...+++..|.+...+- +.||||++||.+.. ++..||.|
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~-----EGdcWiCM 142 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS-----EGDCWICM 142 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc-----CCceeeeH
Confidence 34679999999999999999999999999985544 4557788888866555 78999999999653 36789999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
|.| ..+++.+...-. ......+++.-+-+|+...+.||.||-+. ..|||||+||+|||++..|.+||||||
T Consensus 143 ELM-d~SlDklYk~vy------~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 143 ELM-DISLDKLYKRVY------SVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred HHH-hhhHHHHHHHHH------HHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeeccc
Confidence 999 677776653211 12235788888888999999999999876 489999999999999999999999999
Q ss_pred ccccccccccccceeccccccccccccCcccCC--CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 825 LARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG--SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 825 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
++..+..+-..+ ..+|-..|||||.+.. ..|+.+|||||+|+++||+.||+.||... .. ..
T Consensus 214 IcGqLv~SiAkT-----~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w----------~s--vf 276 (361)
T KOG1006|consen 214 ICGQLVDSIAKT-----VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW----------DS--VF 276 (361)
T ss_pred chHhHHHHHHhh-----hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH----------HH--HH
Confidence 998765543222 2358899999998865 35899999999999999999999998632 11 22
Q ss_pred hhhhhhh--c-cccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 903 DHVIDIV--D-PILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 903 ~~~~~~~--d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
+++..++ | |.+..+.+ ..+....+..++..|+.+|-.+||+..++.+.
T Consensus 277 eql~~Vv~gdpp~l~~~~~-----------------~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 277 EQLCQVVIGDPPILLFDKE-----------------CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHHHcCCCCeecCccc-----------------ccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 3322211 1 11211111 13466779999999999999999999998764
No 384
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=6.5e-32 Score=293.63 Aligned_cols=270 Identities=26% Similarity=0.314 Sum_probs=198.1
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
|+..+.||+|++|.||+|+...+++.||+|++.... ....+.+..|+.++++++|+|++++++++. ..+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 567789999999999999999889999999997543 334467889999999999999999999854 3478999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
||||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||+|+||++++++.+||+|
T Consensus 76 v~e~~~-~~l~~~i~~~~----------~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d 141 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP----------GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLAD 141 (282)
T ss_pred EecCcC-cCHHHHHHhhc----------cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEec
Confidence 999996 69999997643 2588999999999999999999998 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHH
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTAL 901 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 901 (988)
||.++....... ......++..|+|||.+.+. .++.++|||||||++||+++|+.||...... ..........
T Consensus 142 ~g~~~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~ 215 (282)
T cd07829 142 FGLARAFGIPLR----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--DQLFKIFQIL 215 (282)
T ss_pred CCcccccCCCcc----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHh
Confidence 999976543221 11123457789999998776 7899999999999999999999998632110 0000000000
Q ss_pred hhh---hhhhhccc--cccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 902 LDH---VIDIVDPI--LINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 902 ~~~---~~~~~d~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
... ........ .......+.. ..........+..+.+++.+||+.||++||++.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 216 GTPTEESWPGVTKLPDYKPTFPKFPP-------KDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred CCCcHHHHHhhcccccccccccccCc-------cchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000 00000000 0000000000 0000111233677999999999999999999999975
No 385
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=7e-32 Score=289.44 Aligned_cols=251 Identities=22% Similarity=0.264 Sum_probs=193.5
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeecc-----ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-----RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
+|.+.+.||+|+||.||+|.+...+..+++|+.+.. .......+..|+.++++++||||+++++++. ...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFL-----ERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHh-----cCC
Confidence 588899999999999999999777776777776521 1223345778999999999999999999854 346
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+++++|.+++...... ...+++.+++.++.|++.|++|||+. +++|+||+|+||++++ +.+
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~ 144 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT-------GKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLL 144 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc-------ccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCE
Confidence 789999999999999888642211 13689999999999999999999998 9999999999999985 569
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
+|+|||.+........ ......|+..|+|||...+..++.++||||||+++|+|++|..||... .......
T Consensus 145 ~l~d~g~~~~~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----~~~~~~~ 215 (260)
T cd08222 145 KIGDFGVSRLLMGSCD----LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ-----NFLSVVL 215 (260)
T ss_pred eecccCceeecCCCcc----cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHH
Confidence 9999999876533221 112245788999999998888899999999999999999999997521 1111110
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
. .... .....+..++.++.+++.+||+.+|++||++.|+++
T Consensus 216 ~-----~~~~----------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 216 R-----IVEG----------------------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred H-----HHcC----------------------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0 0000 000112245678899999999999999999999986
No 386
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4e-32 Score=303.85 Aligned_cols=267 Identities=24% Similarity=0.308 Sum_probs=218.5
Q ss_pred cCHHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeeccc
Q 001974 653 VSYESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSS 731 (988)
Q Consensus 653 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 731 (988)
..++.+...++.|++.+.||.|.+|.||+++...+++.+|+|+.....+ ..++...|.++++.. .|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 4455566677889999999999999999999999999999999875543 446788899999988 79999999999988
Q ss_pred ccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCee
Q 001974 732 IDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVL 811 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIl 811 (988)
.+...++.+|+|||||.+|+..++++.... .++.|..+..|++.++.|+.+||.. .++|||||-.||+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g---------~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiL 155 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTKG---------NRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVL 155 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhcc---------cchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEE
Confidence 777888999999999999999999987652 5799999999999999999999998 9999999999999
Q ss_pred eCCCCcEEEeeecccccccccccccceeccccccccccccCcccCC-----CCCCCccchHHHHHHHHHHHhCCCCCCcc
Q 001974 812 LDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-----SEVSTNGDIYSYGILLLEMVTGKKPTDVM 886 (988)
Q Consensus 812 l~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~p~~~~ 886 (988)
++.++.+|++|||.+..++..... ....+||+.|||||++.. ..|+..+|+||+|++..||.-|.+|+..+
T Consensus 156 LT~e~~VKLvDFGvSaQldsT~gr----RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm 231 (953)
T KOG0587|consen 156 LTENAEVKLVDFGVSAQLDSTVGR----RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM 231 (953)
T ss_pred EeccCcEEEeeeeeeeeeeccccc----ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCc
Confidence 999999999999999877654332 334679999999999764 35778899999999999999999997644
Q ss_pred ccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 887 FEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 887 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.+.. .. .. +. +-+.+++..+.....++.++|..|+.+|.++||++.++++
T Consensus 232 HPmr--------aL-F~-Ip--------------------RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 232 HPMR--------AL-FL-IP--------------------RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred chhh--------hh-cc-CC--------------------CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 2210 00 00 00 0011122223345667899999999999999999999874
No 387
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.8e-31 Score=284.47 Aligned_cols=237 Identities=27% Similarity=0.344 Sum_probs=191.5
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeec
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFM 747 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 747 (988)
||+|+||.||++.+..+++.||+|+++.... .....+..|+.++++++||||+++++.+ ..+...++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEecC
Confidence 6899999999999988899999999864432 2345788999999999999999999884 4558899999999
Q ss_pred cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccc
Q 001974 748 TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 748 ~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 827 (988)
++++|.+++.... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||.+.
T Consensus 76 ~~~~L~~~l~~~~-----------~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~ 141 (250)
T cd05123 76 PGGELFSHLSKEG-----------RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAK 141 (250)
T ss_pred CCCcHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcce
Confidence 9999999986543 578999999999999999999998 99999999999999999999999999997
Q ss_pred cccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhh
Q 001974 828 VRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVID 907 (988)
Q Consensus 828 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (988)
....... ......++..|+|||...+...+.++|+||||+++|++++|+.||..... ...... +.
T Consensus 142 ~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~-----~~- 206 (250)
T cd05123 142 ELSSEGS----RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEK-----IL- 206 (250)
T ss_pred ecccCCC----cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHH-----Hh-
Confidence 6543211 12234578899999999888889999999999999999999999863211 010000 00
Q ss_pred hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHH
Q 001974 908 IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITN 963 (988)
Q Consensus 908 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 963 (988)
......+...+.++.+++.+||..||++||++++
T Consensus 207 ----------------------~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 207 ----------------------KDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ----------------------cCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 0011122244678899999999999999999954
No 388
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=280.54 Aligned_cols=242 Identities=24% Similarity=0.312 Sum_probs=193.0
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 737 (988)
..+|..+.+||+|+||.|.+|..+.+.+.+|||+++..- ....+--+.|-++++-- +-|.++++..+ |+.-
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQTm 422 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQTM 422 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hhhh
Confidence 456889999999999999999999999999999997431 22233445677777665 56788888777 4555
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
+..|+||||+.||+|--+++.-+ ++.+..+..+|.+||-||-+||++ |||.||||-+|||+|.+|+
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~G-----------kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGH 488 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVG-----------KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGH 488 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhc-----------ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCc
Confidence 89999999999999998886553 688889999999999999999999 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
+||+|||+++.---. ...+....||+.|+|||++...+|+.++|.|||||+||||+.|++||+.. ++..+
T Consensus 489 iKi~DFGmcKEni~~----~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe--DE~el---- 558 (683)
T KOG0696|consen 489 IKIADFGMCKENIFD----GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE--DEDEL---- 558 (683)
T ss_pred eEeeecccccccccC----CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC--CHHHH----
Confidence 999999999743221 22234567999999999999999999999999999999999999998732 11110
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM 959 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 959 (988)
-+.+.......+...+.+...+.+..+.+.|.+|.
T Consensus 559 ---------------------------F~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 559 ---------------------------FQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred ---------------------------HHHHHHccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence 01112222334445667788999999999999994
No 389
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=2.7e-32 Score=258.30 Aligned_cols=286 Identities=19% Similarity=0.269 Sum_probs=211.5
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcC-CCCceEEEeecccccccCCCc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 739 (988)
..++|++++++|+|.|++||.|....+.+.++||++++.. .+.+.+|+.+++.++ ||||+++++...++ ....
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp---~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDP---ESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCc---cccC
Confidence 3578999999999999999999988889999999997543 477889999999995 99999999997654 3466
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC-CcE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND-MIA 818 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~ 818 (988)
..+|+||+.+.+..... +.++..++..++.++++||.|+|++ ||.|||+||.|+|+|.. -.+
T Consensus 110 paLiFE~v~n~Dfk~ly--------------~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkL 172 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY--------------PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKL 172 (338)
T ss_pred chhHhhhhccccHHHHh--------------hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhcee
Confidence 78999999888887665 4678889999999999999999999 99999999999999965 479
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
+|+|+|+|.++.+...... .+.+..|.-||.+.. ..|+..-|+|||||++..|+..+.||-........++..+
T Consensus 173 rlIDWGLAEFYHp~~eYnV-----RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIa 247 (338)
T KOG0668|consen 173 RLIDWGLAEFYHPGKEYNV-----RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIA 247 (338)
T ss_pred eeeecchHhhcCCCceeee-----eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHH
Confidence 9999999998776554433 346778899999876 4578889999999999999999999854333323333333
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhh-----ccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH--HHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKI-----NGKIECPISMVRIGVACSVESPQDRMSITNVVHE--LQS 970 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~--L~~ 970 (988)
...-.++....+++.-..-.+.+........+..+. ...--..++..+++.+.+.+|-++|+||+|.+.. +..
T Consensus 248 kVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 248 KVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred HHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 333333343333332221111111111111111111 1111235778999999999999999999998864 344
Q ss_pred HHHH
Q 001974 971 VKNA 974 (988)
Q Consensus 971 i~~~ 974 (988)
+.++
T Consensus 328 ~~~~ 331 (338)
T KOG0668|consen 328 VREA 331 (338)
T ss_pred HHHH
Confidence 4433
No 390
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=3e-31 Score=318.23 Aligned_cols=147 Identities=29% Similarity=0.446 Sum_probs=130.2
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc---cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR---HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 738 (988)
.++|.+.++||+|+||.||+|.+..+++.||+|+++... ......+..|+.+++.++||||+++++++. ..+
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~~ 77 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-----SAN 77 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-----ECC
Confidence 367999999999999999999998899999999986432 223367889999999999999999998853 447
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
..++||||+++++|.+++.... .+++..++.|+.||+.||+|||+. +||||||||+|||++.++.+
T Consensus 78 ~~~lVmEy~~g~~L~~li~~~~-----------~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~v 143 (669)
T cd05610 78 NVYLVMEYLIGGDVKSLLHIYG-----------YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHI 143 (669)
T ss_pred EEEEEEeCCCCCCHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCE
Confidence 8999999999999999986542 578888999999999999999998 99999999999999999999
Q ss_pred EEeeecccc
Q 001974 819 HVGDFGLAR 827 (988)
Q Consensus 819 kL~DfG~a~ 827 (988)
||+|||+++
T Consensus 144 kL~DFGls~ 152 (669)
T cd05610 144 KLTDFGLSK 152 (669)
T ss_pred EEEeCCCCc
Confidence 999999986
No 391
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-31 Score=276.66 Aligned_cols=136 Identities=26% Similarity=0.429 Sum_probs=121.0
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcC-----C---CCceEEEeecccccc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIR-----H---RNLVKVITSCSSIDF 734 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~~~~~~~~~~~ 734 (988)
.+|.+.++||.|.|++||+|.+....+.||+|+.+. .....+....||+++++++ | .+||++++.|... .
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs-G 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS-G 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec-C
Confidence 689999999999999999999999999999999874 3456688899999999983 2 3799999998765 5
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
.++.++|+|+|+. |.+|..+|..... +.++...+++|++||+.||.|||..| +|||-||||+|||+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y---------rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY---------RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC---------CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 7789999999999 8899999876653 57899999999999999999999997 99999999999998
No 392
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.4e-31 Score=280.47 Aligned_cols=222 Identities=20% Similarity=0.163 Sum_probs=176.7
Q ss_pred ccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeeccccchh
Q 001974 674 GSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLE 753 (988)
Q Consensus 674 G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 753 (988)
|.+|.||+|++..+++.||+|+++... .+..|...+....||||+++++++. ..+..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIV-----SEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhee-----cCCeEEEEEecCCCCCHH
Confidence 899999999999999999999986432 2334555555667999999999853 457899999999999999
Q ss_pred hhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccc
Q 001974 754 NWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVS 833 (988)
Q Consensus 754 ~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 833 (988)
+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+.......
T Consensus 74 ~~l~~~~-----------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~ 139 (237)
T cd05576 74 SHISKFL-----------NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC 139 (237)
T ss_pred HHHHHhc-----------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc
Confidence 9986432 588999999999999999999998 99999999999999999999999999886543321
Q ss_pred cccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhcccc
Q 001974 834 NLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPIL 913 (988)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 913 (988)
.+..++..|+|||...+..++.++||||+|+++|||++|+.|+...... ... .
T Consensus 140 -------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~----~- 192 (237)
T cd05576 140 -------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INT----H- 192 (237)
T ss_pred -------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------ccc----c-
Confidence 1233577899999998888999999999999999999999886421000 000 0
Q ss_pred ccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHH
Q 001974 914 INDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITN 963 (988)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 963 (988)
.....+..++..+.+++.+|++.||++||++.+
T Consensus 193 -----------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 193 -----------------TTLNIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred -----------------cccCCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 000112235667899999999999999999743
No 393
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=293.15 Aligned_cols=242 Identities=23% Similarity=0.248 Sum_probs=194.2
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.++.|+....+|.|+|+.|-.+.+..+++..+||++... ..+..+|+.++... .||||+++.+.+ .++.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVY-----EDGKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeeccee-----cCCce
Confidence 356788888899999999999999999999999998644 23445677777666 899999999995 45689
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee-CCCCcE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL-DNDMIA 818 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll-~~~~~~ 818 (988)
.++|||++.|+-+.+.+.... ....++..|+.+|+.|+.|||++ |+||||+||+|||+ ++.+++
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~------------~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~l 455 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKP------------EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHL 455 (612)
T ss_pred eeeeehhccccHHHHHHHhcc------------hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcE
Confidence 999999999988877776543 22267788999999999999998 99999999999999 699999
Q ss_pred EEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 819 HVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 819 kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
+|+|||.++..... ..+..-|..|.|||+.....|++++|+||||++||+|++|+.||...-.+
T Consensus 456 rltyFG~a~~~~~~-------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--------- 519 (612)
T KOG0603|consen 456 RLTYFGFWSELERS-------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--------- 519 (612)
T ss_pred EEEEechhhhCchh-------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch---------
Confidence 99999999876554 11223688999999999999999999999999999999999998743221
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
..+...+ ..+ .....++.+..+|+.+||+.||.+||+|.++...
T Consensus 520 ~ei~~~i-----------------------~~~--~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 520 IEIHTRI-----------------------QMP--KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred HHHHHhh-----------------------cCC--ccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 0000000 000 0113567788999999999999999999998754
No 394
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=284.91 Aligned_cols=244 Identities=24% Similarity=0.377 Sum_probs=195.2
Q ss_pred CceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEe
Q 001974 668 THLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYE 745 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 745 (988)
.++||+|.||+||-|.++++|+.||||++.+.+ ......+++|+.+++++.||.||.+...| +..+..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~-----ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF-----ETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----cCCceEEEEeh
Confidence 478999999999999999999999999997433 23447899999999999999999998885 45589999999
Q ss_pred eccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC---CcEEEee
Q 001974 746 FMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND---MIAHVGD 822 (988)
Q Consensus 746 ~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~D 822 (988)
-+ +|+..+.+-... ..++++.....+..||+.||.|||.+ +|||+|+||+|||+.+. -.+||||
T Consensus 644 Kl-~GDMLEMILSsE---------kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCD 710 (888)
T KOG4236|consen 644 KL-HGDMLEMILSSE---------KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCD 710 (888)
T ss_pred hh-cchHHHHHHHhh---------cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecc
Confidence 99 666666654332 15788888899999999999999999 99999999999999644 3799999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHh
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALL 902 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 902 (988)
||+|++..+... ...++||+.|.|||++....|...-|+||.||++|--++|..||... .++.+.++.
T Consensus 711 FGfARiIgEksF-----RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIndQIQN--- 778 (888)
T KOG4236|consen 711 FGFARIIGEKSF-----RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDINDQIQN--- 778 (888)
T ss_pred ccceeecchhhh-----hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchhHHhhc---
Confidence 999998876433 23468999999999999999999999999999999999999998632 121111110
Q ss_pred hhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 903 DHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 903 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
..+...+..| .++..+..++|...++..-++|-|.+.-+
T Consensus 779 --------AaFMyPp~PW----------------~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 779 --------AAFMYPPNPW----------------SEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred --------cccccCCCch----------------hhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 1111112223 25666788999999999999999887654
No 395
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.4e-32 Score=277.22 Aligned_cols=262 Identities=23% Similarity=0.363 Sum_probs=202.7
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc-------ccchhHHHHHHHHHHHhcCCCCceEEEeecccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-------RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDF 734 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 734 (988)
.++|-....||+|||+.||+|.+....+.||||+-... .....+...+|.++-+.+.||.||++|+++.-
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl--- 538 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL--- 538 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee---
Confidence 35688889999999999999999888999999987422 12233567889999999999999999999753
Q ss_pred cCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC-
Q 001974 735 QGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD- 813 (988)
Q Consensus 735 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~- 813 (988)
+.+.+|-|+|||+|-+|+-|++..+ -+++.+++.|+.||+.||.||.+. +++|||-||||.|||+-
T Consensus 539 -DtdsFCTVLEYceGNDLDFYLKQhk-----------lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~ 605 (775)
T KOG1151|consen 539 -DTDSFCTVLEYCEGNDLDFYLKQHK-----------LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVN 605 (775)
T ss_pred -ccccceeeeeecCCCchhHHHHhhh-----------hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEec
Confidence 4578999999999999999998765 689999999999999999999997 67999999999999995
Q ss_pred --CCCcEEEeeeccccccccccccc---ceeccccccccccccCcccCCC----CCCCccchHHHHHHHHHHHhCCCCCC
Q 001974 814 --NDMIAHVGDFGLARVRQEVSNLT---QSCSVGVRGTIGYAAPEYGLGS----EVSTNGDIYSYGILLLEMVTGKKPTD 884 (988)
Q Consensus 814 --~~~~~kL~DfG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwslG~vl~elltg~~p~~ 884 (988)
.-|.+||+|||++++.+...... ...+.-..||.+|.+||.+.-+ +.+.|+||||.||++|..+.|+.||.
T Consensus 606 GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 606 GTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred CcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCC
Confidence 45789999999999877654321 1123345799999999986543 56889999999999999999999987
Q ss_pred ccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHH
Q 001974 885 VMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNV 964 (988)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 964 (988)
...... ++.++. .+.. . ........+.+..+..++|++|+++--++|....++
T Consensus 686 hnqsQQ-dILqeN------TIlk---A-----------------tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qL 738 (775)
T KOG1151|consen 686 HNQSQQ-DILQEN------TILK---A-----------------TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQL 738 (775)
T ss_pred CchhHH-HHHhhh------chhc---c-----------------eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHH
Confidence 421110 000000 0000 0 000111223566778999999999999999888776
Q ss_pred HH
Q 001974 965 VH 966 (988)
Q Consensus 965 l~ 966 (988)
..
T Consensus 739 A~ 740 (775)
T KOG1151|consen 739 AC 740 (775)
T ss_pred cc
Confidence 53
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-31 Score=260.95 Aligned_cols=249 Identities=23% Similarity=0.347 Sum_probs=200.6
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 736 (988)
..++|...++||+|+|+.|.+++.+++.+.+|+|+++++ +.+...-.+.|-.+..+. +||.+|-+..+ |+.
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqt 322 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQT 322 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hcc
Confidence 457899999999999999999999999999999999743 334445567777777777 79999998887 566
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM 816 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~ 816 (988)
+...++|.||++||+|--++.+.+ +++++.++.+...|..||.|||++ |||.||+|.+||++|.+|
T Consensus 323 esrlffvieyv~ggdlmfhmqrqr-----------klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeg 388 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQR-----------KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEG 388 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhh-----------cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCC
Confidence 789999999999999988776653 799999999999999999999999 999999999999999999
Q ss_pred cEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCcccc--CCcchH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFE--GDLNLH 894 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~--~~~~~~ 894 (988)
++||+|||+++.--.... .+..+.||+.|.|||++.+..|...+|.|++||+++||+.|+.||+.... .+.+..
T Consensus 389 hikltdygmcke~l~~gd----~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~nte 464 (593)
T KOG0695|consen 389 HIKLTDYGMCKEGLGPGD----TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTE 464 (593)
T ss_pred ceeecccchhhcCCCCCc----ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchh
Confidence 999999999985333222 23346799999999999999999999999999999999999999986432 233333
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM 959 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 959 (988)
++.-..+.+. ++..+...+.....+++.-+.+||.+|.
T Consensus 465 dylfqvilek---------------------------qiriprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 465 DYLFQVILEK---------------------------QIRIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred HHHHHHHhhh---------------------------cccccceeehhhHHHHHHhhcCCcHHhc
Confidence 3332222221 1112223444566888899999999984
No 397
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.5e-30 Score=301.86 Aligned_cols=281 Identities=19% Similarity=0.187 Sum_probs=173.5
Q ss_pred hhCCCCCCceeccccceeEEEEEECCC----CeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeeccc-cccc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQD----GTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSS-IDFQ 735 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~ 735 (988)
..++|++.+.||+|+||.||+|++..+ +..||+|++..... .+....| .+....+.++..++..+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999878 89999998753221 1111111 1111122222222211111 1013
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhh---------hHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVE---------IEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLK 806 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 806 (988)
.+...++||||+++++|.+++........... ..........+..++.||+.||+|||+. +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 45788999999999999999875432110000 0001122345678999999999999998 99999999
Q ss_pred CCCeeeCC-CCcEEEeeecccccccccccccceeccccccccccccCcccCCC----------------------CCCCc
Q 001974 807 PGNVLLDN-DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS----------------------EVSTN 863 (988)
Q Consensus 807 p~NIll~~-~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~ 863 (988)
|+|||+++ ++.+||+|||+|+........ ......+++.|+|||.+... .++.+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~---~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY---IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccccc---CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999986 579999999999865432211 12235689999999965322 23446
Q ss_pred cchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhh---hhccccchh
Q 001974 864 GDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQA---KINGKIECP 940 (988)
Q Consensus 864 sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 940 (988)
+|||||||++|||+++..|++. ....+........ .+...|........... .........
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~------~~~~~~~~l~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 423 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDS------NLIQFNRQLKRND----------YDLVAWRKLVEPRASPDLRRGFEVLDLDG 423 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCch------HHHHHHHHHHhcC----------CcHHHHHHhhccccchhhhhhhhhccccc
Confidence 7999999999999997766432 1111111110000 00111111000000000 000001122
Q ss_pred HHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 941 ISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 941 ~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
....+|+.+|++.||++|||++|+++.
T Consensus 424 ~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 424 GAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred hHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 345689999999999999999999863
No 398
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-31 Score=245.52 Aligned_cols=211 Identities=24% Similarity=0.279 Sum_probs=171.4
Q ss_pred HHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccc-cchhHHHHHHHHHHHhc-CCCCceEEEeeccccccc
Q 001974 658 LFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR-HGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 658 l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 735 (988)
+....+....+..||+|++|.|-+-++..+|...|+|.++..- ....++...|+.+..+. .+|.+|++||.. .
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~-----~ 115 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL-----F 115 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh-----h
Confidence 4445566677789999999999999999999999999997432 23446777888876665 799999999974 3
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
.....+|.||.| ..+|+.+-++-- ...+.+++.-+-+||..+.+||.|||++ ..++|||+||+|||++.+
T Consensus 116 regdvwIcME~M-~tSldkfy~~v~-------~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~ 185 (282)
T KOG0984|consen 116 REGDVWICMELM-DTSLDKFYRKVL-------KKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYD 185 (282)
T ss_pred ccccEEEeHHHh-hhhHHHHHHHHH-------hcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccC
Confidence 447889999999 678877754321 1224788889999999999999999997 589999999999999999
Q ss_pred CcEEEeeecccccccccccccceeccccccccccccCcccCC----CCCCCccchHHHHHHHHHHHhCCCCCCcccc
Q 001974 816 MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG----SEVSTNGDIYSYGILLLEMVTGKKPTDVMFE 888 (988)
Q Consensus 816 ~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwslG~vl~elltg~~p~~~~~~ 888 (988)
|++|+||||.+..+.++-..+ ...|...|||||.+.. ..|+-++||||+|+++.||.+++.||+..+.
T Consensus 186 GqVKiCDFGIsG~L~dSiAkt-----~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 186 GQVKICDFGISGYLVDSIAKT-----MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred CcEEEcccccceeehhhhHHH-----HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 999999999998766543222 1348889999998754 4789999999999999999999999986543
No 399
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-31 Score=279.20 Aligned_cols=243 Identities=22% Similarity=0.325 Sum_probs=198.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc---ccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ---RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
.++..+..||-||||.|-++........+|+|++++. +....+.+..|-.+|...+.|.||++|-. |.+..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccchh
Confidence 4456678899999999999998755556899988643 34445678889999999999999999987 556699
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
.|+.||-|-||.++..++..+ .++......++..+.+|++|||++ +||.|||||+|.++|.+|-+|
T Consensus 495 vYmLmEaClGGElWTiLrdRg-----------~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~K 560 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRG-----------SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLK 560 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcC-----------CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceE
Confidence 999999999999999998765 688888999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYART 899 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~ 899 (988)
|.|||+|+......... ++.||+.|.|||++.+...+.++|.||+|+++||+++|.+||...-+ +.-|
T Consensus 561 LVDFGFAKki~~g~KTw-----TFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp----mktY--- 628 (732)
T KOG0614|consen 561 LVDFGFAKKIGSGRKTW-----TFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP----MKTY--- 628 (732)
T ss_pred EeehhhHHHhccCCcee-----eecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch----HHHH---
Confidence 99999999887655433 35699999999999999999999999999999999999999874311 1111
Q ss_pred HHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCC
Q 001974 900 ALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMS 960 (988)
Q Consensus 900 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 960 (988)
..+...+|. ...+..++....++|++....+|.+|..
T Consensus 629 ---n~ILkGid~---------------------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 629 ---NLILKGIDK---------------------IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ---HHHHhhhhh---------------------hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 111111111 1123345666789999999999999965
No 400
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2e-29 Score=285.87 Aligned_cols=280 Identities=19% Similarity=0.236 Sum_probs=185.4
Q ss_pred hhCCCCCCceeccccceeEEEEEEC----------------CCCeEEEEEEeeccccchhHH--------------HHHH
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFD----------------QDGTIVAIKVFNLQRHGASKS--------------FLAE 710 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 710 (988)
..++|++.++||+|+||+||+|.+. ..++.||||.+........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 245689999986543332233 3446
Q ss_pred HHHHHhcCCCCc-----eEEEeeccccc---ccCCCceEEEEeeccccchhhhcCCCCCCCc-------------hhhhH
Q 001974 711 CKALKNIRHRNL-----VKVITSCSSID---FQGNDFKALVYEFMTNGSLENWLHPDAVPQK-------------DVEIE 769 (988)
Q Consensus 711 ~~~l~~l~h~ni-----v~~~~~~~~~~---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~-------------~~~~~ 769 (988)
+.++.+++|.++ ++++++|.... ....+..++||||+++++|.++++....... .....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766544 66777765421 1123568999999999999999975422110 00011
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccccceecccccccccc
Q 001974 770 IQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGY 849 (988)
Q Consensus 770 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y 849 (988)
...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........... ....+++.|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~---~~g~~tp~Y 376 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNP---LYGMLDPRY 376 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCc---cccCCCcce
Confidence 23467888999999999999999998 999999999999999999999999999975433221111 112357899
Q ss_pred ccCcccCCCCC----------------------CCccchHHHHHHHHHHHhCCC-CCCccccCCcchHHHHHHHHhhhhh
Q 001974 850 AAPEYGLGSEV----------------------STNGDIYSYGILLLEMVTGKK-PTDVMFEGDLNLHNYARTALLDHVI 906 (988)
Q Consensus 850 ~aPE~~~~~~~----------------------~~~sDvwslG~vl~elltg~~-p~~~~~~~~~~~~~~~~~~~~~~~~ 906 (988)
+|||.+..... ..+.||||+||++|+|++|.. ||.....-...+..+ ....
T Consensus 377 ~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~-----~~~~- 450 (507)
T PLN03224 377 SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQY-----DNDL- 450 (507)
T ss_pred eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhc-----cchH-
Confidence 99998754321 124699999999999999875 654211100000000 0000
Q ss_pred hhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCC---CCCCCHHHHHH
Q 001974 907 DIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESP---QDRMSITNVVH 966 (988)
Q Consensus 907 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 966 (988)
..|........ .............+++.+|+..+| .+|+|++|+++
T Consensus 451 -----------~~~r~~~~~~~---~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 451 -----------NRWRMYKGQKY---DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred -----------HHHHhhcccCC---CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 00100000000 001112355678899999999866 68999999985
No 401
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=5.2e-31 Score=293.60 Aligned_cols=247 Identities=27% Similarity=0.400 Sum_probs=188.5
Q ss_pred CCCCceecccccee-EEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGS-VYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~-Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
|...+.+|.|+.|+ ||+|.. .|+.||||++-. +......+|+..++.- +||||+++++. -.+....||
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YI 580 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYI 580 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEE
Confidence 33446789999885 899999 789999998743 2335678999999988 79999999987 345688999
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC---C--Cc
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN---D--MI 817 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~--~~ 817 (988)
..|.| ..+|.+++..... +. ........+.+..|+++||++||+. +||||||||.||||+. + .+
T Consensus 581 alELC-~~sL~dlie~~~~---d~----~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~r 649 (903)
T KOG1027|consen 581 ALELC-ACSLQDLIESSGL---DV----EMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLR 649 (903)
T ss_pred EehHh-hhhHHHHHhcccc---ch----hhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCccee
Confidence 99999 7899999987411 11 1111145678899999999999998 9999999999999975 2 47
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNY 896 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~ 896 (988)
++|+|||+++........-.. ..+..||-+|+|||++....-+.++||||+||++|+.++ |..||......+.++
T Consensus 650 a~iSDfglsKkl~~~~sS~~r-~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI--- 725 (903)
T KOG1027|consen 650 AKISDFGLSKKLAGGKSSFSR-LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI--- 725 (903)
T ss_pred EEecccccccccCCCcchhhc-ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh---
Confidence 999999999987765443333 456779999999999999888889999999999999999 599997543322111
Q ss_pred HHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 897 ARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 897 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
........ ......++ +..+||.+|+++||..||+|.+|+
T Consensus 726 -----l~~~~~L~----------------------~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 726 -----LTGNYTLV----------------------HLEPLPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred -----hcCcccee----------------------eeccCchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 10000000 00001122 678999999999999999999997
No 402
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=3.6e-29 Score=265.34 Aligned_cols=239 Identities=29% Similarity=0.392 Sum_probs=191.0
Q ss_pred cceeEEEEEECCCCeEEEEEEeeccccch-hHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeeccccchh
Q 001974 675 SFGSVYKGAFDQDGTIVAIKVFNLQRHGA-SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLE 753 (988)
Q Consensus 675 ~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 753 (988)
+||.||+|.+..+++.||+|++....... .+.+.+|++.+++++|+|++++++++.. +...++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 58999999998889999999997554443 6789999999999999999999998643 37889999999999999
Q ss_pred hhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccc
Q 001974 754 NWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVS 833 (988)
Q Consensus 754 ~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 833 (988)
+++.... .+++..++.++.+++.+++|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 76 ~~~~~~~-----------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~ 141 (244)
T smart00220 76 DLLKKRG-----------RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG 141 (244)
T ss_pred HHHHhcc-----------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc
Confidence 9986543 378889999999999999999998 99999999999999999999999999998765432
Q ss_pred cccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhcccc
Q 001974 834 NLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPIL 913 (988)
Q Consensus 834 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 913 (988)
......++..|+|||...+..++.++||||+|+++|++++|..||...... ...... ... ...
T Consensus 142 -----~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~----~~~~~~-~~~-------~~~ 204 (244)
T smart00220 142 -----LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL----LELFKK-IGK-------PKP 204 (244)
T ss_pred -----ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHH-Hhc-------cCC
Confidence 112345788999999998888999999999999999999999998642110 000000 000 000
Q ss_pred ccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 914 INDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.. ......++.++.+++.+|+..+|++||++.++++
T Consensus 205 ~~-----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 205 PF-----------------PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CC-----------------ccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 00 0000016678999999999999999999999986
No 403
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.8e-31 Score=256.47 Aligned_cols=203 Identities=27% Similarity=0.377 Sum_probs=166.6
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeec--cccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNL--QRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
.+..+.||-|+||.||.+++..+|+.||+|.+.. .+-...+.+-+|++++..++|.|++..++.........=.+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 4556899999999999999999999999998852 23344578889999999999999999887643221111145678
Q ss_pred EEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEee
Q 001974 743 VYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGD 822 (988)
Q Consensus 743 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 822 (988)
|+|.| ..+|...+-.. +.++...+.-+..||++||.|||+. +|.||||||.|.+++.+..+||||
T Consensus 135 ~TELm-QSDLHKIIVSP-----------Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICD 199 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIVSP-----------QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICD 199 (449)
T ss_pred HHHHH-HhhhhheeccC-----------CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecc
Confidence 99998 77888877544 4788899999999999999999999 999999999999999999999999
Q ss_pred ecccccccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 823 FGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 823 fG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
||+|+..+...... ....+-|..|+|||++++. .|+.+.||||.||++.|++..+..|+.
T Consensus 200 FGLARvee~d~~~h---MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 200 FGLARTWDQRDRLN---MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred cccccccchhhhhh---hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 99999654432211 1223568899999999984 689999999999999999999888763
No 404
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.3e-29 Score=268.81 Aligned_cols=216 Identities=25% Similarity=0.319 Sum_probs=177.9
Q ss_pred HHHHHHh---hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEee
Q 001974 655 YESLFKA---TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITS 728 (988)
Q Consensus 655 ~~~l~~~---~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~ 728 (988)
|..+.++ ..-|..++.||-|+||+|.+++...+...||.|.+++.+. .....+..|-+||.....+=||++|..
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 4444443 3568888999999999999999988888999999875432 333567789999999999999999987
Q ss_pred cccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCC
Q 001974 729 CSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPG 808 (988)
Q Consensus 729 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 808 (988)
|++.+.+|+||+|++||++-.++-+.+ -+.+.-++.++.++..|+++.|.. |+|||||||+
T Consensus 698 -----FQDkdnLYFVMdYIPGGDmMSLLIrmg-----------IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPD 758 (1034)
T KOG0608|consen 698 -----FQDKDNLYFVMDYIPGGDMMSLLIRMG-----------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPD 758 (1034)
T ss_pred -----eccCCceEEEEeccCCccHHHHHHHhc-----------cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCcc
Confidence 677899999999999999999886554 577888899999999999999999 9999999999
Q ss_pred CeeeCCCCcEEEeeeccccccc---------ccccc-----------------------------cceeccccccccccc
Q 001974 809 NVLLDNDMIAHVGDFGLARVRQ---------EVSNL-----------------------------TQSCSVGVRGTIGYA 850 (988)
Q Consensus 809 NIll~~~~~~kL~DfG~a~~~~---------~~~~~-----------------------------~~~~~~~~~gt~~y~ 850 (988)
|||||.+|++||+|||+++-+. ..... ........+||+.|+
T Consensus 759 NILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyi 838 (1034)
T KOG0608|consen 759 NILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYI 838 (1034)
T ss_pred ceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCccc
Confidence 9999999999999999986321 11000 000112346999999
Q ss_pred cCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccC
Q 001974 851 APEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEG 889 (988)
Q Consensus 851 aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~ 889 (988)
|||++....++..+|.||.||+||||+.|++||.....+
T Consensus 839 apevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 839 APEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred ChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCC
Confidence 999999999999999999999999999999999754433
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4e-29 Score=242.91 Aligned_cols=257 Identities=21% Similarity=0.279 Sum_probs=195.5
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
+.|.+.+.+|+|.||.+-+++++.+.+.+|+|.+... ....++|.+|...--.+ .|.||+.-|++. |+..+.++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Yv 98 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAYV 98 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceEE
Confidence 5688999999999999999999999999999998643 23457899998776666 689999988774 66678899
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeC--CCCcEE
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLD--NDMIAH 819 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~k 819 (988)
+++||++.|+|.+-+... .+.+....+++.|++.|+.|||++ ++||||||.+||||- +..++|
T Consensus 99 F~qE~aP~gdL~snv~~~------------GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvK 163 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA------------GIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVK 163 (378)
T ss_pred EeeccCccchhhhhcCcc------------cccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEE
Confidence 999999999999888764 366778889999999999999999 999999999999993 334899
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCC-----CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-----EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
+||||..+..+..-. ....+..|.|||..... ...+.+|||.||+++|..+||+.||+...-.+..+.
T Consensus 164 lcDFG~t~k~g~tV~-------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~ 236 (378)
T KOG1345|consen 164 LCDFGLTRKVGTTVK-------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYW 236 (378)
T ss_pred eeecccccccCceeh-------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHH
Confidence 999999986543221 12246789999975432 356789999999999999999999986555555555
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
.|..-.-... +.+...+ ....+.+.++.++-+..+|++|-...++.++....
T Consensus 237 ~~~~w~~rk~------~~~P~~F-------------------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 237 EWEQWLKRKN------PALPKKF-------------------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred HHHHHhcccC------ccCchhh-------------------cccCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 5543211111 0111111 12445678899999999999996655655554443
No 406
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-30 Score=266.20 Aligned_cols=390 Identities=18% Similarity=0.169 Sum_probs=233.9
Q ss_pred CcEEEEEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCC-CCCCCcCCcccccCCCCceee
Q 001974 32 RRVTVLNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSD-NDLVGEIPANLSYCSRLTILF 110 (988)
Q Consensus 32 ~~v~~l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~ 110 (988)
...+.++|..|+|+.+.+.+|+.++.||.||||+|+|+.+-|++|.++.+|.+|-+.+ |+|+...-++|++|..|+.|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 4666677777777766666777777777777777777777777777777766666555 777755556677777777777
Q ss_pred cCcccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeecccccc------------CCCCCccccCcccc
Q 001974 111 LGRNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAF------------GGNIPNSLGQLKEL 178 (988)
Q Consensus 111 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l------------~~~~~~~~~~l~~L 178 (988)
+.-|++.-+..++|..|++|..|.+.+|.+..+--.+|.++.+++.++++.|.+ ....|-.++++.-.
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~ 226 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCV 226 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceec
Confidence 777777766677777777777777777777633333677777777777776662 12233344444444
Q ss_pred cccccccccccCccchhhccc-cCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEec
Q 001974 179 KSLGLGANNLSGIIPPSIYNL-SLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEAL 257 (988)
Q Consensus 179 ~~L~L~~N~l~~~~~~~l~~l-~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~ 257 (988)
.-.-|.++++..+.+..|..- ..+..=..+.+...+..|...|.++++|++|+|++|+|+.+-+.+|..+..++.|.|.
T Consensus 227 ~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~ 306 (498)
T KOG4237|consen 227 SPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLT 306 (498)
T ss_pred chHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcC
Confidence 444444444443333333221 1111111122223335666666777777777777777777777777777777777777
Q ss_pred cccccCcccccccCCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCC---------------CCCch
Q 001974 258 DNSFSGKLSVNFGGMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRG---------------ALPHS 322 (988)
Q Consensus 258 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~---------------~~p~~ 322 (988)
+|++..+....|.++..|+.|+|++|+|+.+.+. +|..+..|.+|.|-.|.+.- .....
T Consensus 307 ~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~------aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~ 380 (498)
T KOG4237|consen 307 RNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPG------AFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNP 380 (498)
T ss_pred cchHHHHHHHhhhccccceeeeecCCeeEEEecc------cccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCC
Confidence 7777777777777777777777777777665544 45666667777776665531 00000
Q ss_pred hhhccccccEEEccCCcccc---CCCcccc---------CCCcce-EEEeeCccCCCccCcccCCCCccCeEecccccCC
Q 001974 323 IANLSDQLQNLIMTSNQLHG---SIPSGIG---------NLVGLY-RLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLS 389 (988)
Q Consensus 323 ~~~~~~~L~~L~L~~N~l~~---~~~~~~~---------~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 389 (988)
-+.-+..++.+.++.+.+.. ..|+..+ ..+-+. ...-|++.++ .+|..+. ..-.+|++.+|.++
T Consensus 381 ~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~ 457 (498)
T KOG4237|consen 381 RCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT 457 (498)
T ss_pred CCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc
Confidence 11122244555555443321 1111111 111121 1223333333 4443332 23457788888887
Q ss_pred CCCCCCCCCCCCCCEEEccccccccccccccccccccceeecCCC
Q 001974 390 GEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLAILHLFEN 434 (988)
Q Consensus 390 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 434 (988)
.+|.. .+.+| .+++++|+|...-.-.|.++++|.+|-|+.|
T Consensus 458 -~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 458 -SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred -ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 66665 56677 7888888887666777888888888887765
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=5.2e-29 Score=265.58 Aligned_cols=198 Identities=25% Similarity=0.362 Sum_probs=170.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc--------chhHHHHHHHHHHHhcC---CCCceEEEeecc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH--------GASKSFLAECKALKNIR---HRNLVKVITSCS 730 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---h~niv~~~~~~~ 730 (988)
..+|+..+.+|+|+||.|+.|.++.....|+||.+.+++- ...-..-.|+.+|..++ |+||++++++
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf-- 637 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF-- 637 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe--
Confidence 4569999999999999999999998889999999864421 11123567999999996 9999999999
Q ss_pred cccccCCCceEEEEeec-cccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCC
Q 001974 731 SIDFQGNDFKALVYEFM-TNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGN 809 (988)
Q Consensus 731 ~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 809 (988)
|++++++|++||-. ++-+|.+++..+. .+++.++..|++|++.|+++||+. +|||||||-+|
T Consensus 638 ---FEddd~yyl~te~hg~gIDLFd~IE~kp-----------~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikden 700 (772)
T KOG1152|consen 638 ---FEDDDYYYLETEVHGEGIDLFDFIEFKP-----------RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDEN 700 (772)
T ss_pred ---eecCCeeEEEecCCCCCcchhhhhhccC-----------ccchHHHHHHHHHHHhcccccccc---Cceeccccccc
Confidence 66779999999987 4569999998764 699999999999999999999999 99999999999
Q ss_pred eeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCC-CCccchHHHHHHHHHHHhCCCCCC
Q 001974 810 VLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEV-STNGDIYSYGILLLEMVTGKKPTD 884 (988)
Q Consensus 810 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~p~~ 884 (988)
|.++.+|-+||+|||.|......+ ...++||..|.|||++.+.+| +..-|||++|+++|.++....||.
T Consensus 701 vivd~~g~~klidfgsaa~~ksgp------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 701 VIVDSNGFVKLIDFGSAAYTKSGP------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEEecCCeEEEeeccchhhhcCCC------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999999999999999997655433 223579999999999999887 456899999999999999988874
No 408
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=1.9e-29 Score=273.47 Aligned_cols=255 Identities=23% Similarity=0.335 Sum_probs=207.2
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
..++|+..+++|.|.||.||+|+++.+++..|+|+++.......+-.++|+-+++..+||||+.++|.+ ...+..
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy-----lr~dkl 87 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY-----LRRDKL 87 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh-----hhhcCc
Confidence 356799999999999999999999999999999999988877788899999999999999999999984 445889
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++.||||.+|+|.+.-+... ++++.++...++...+|++|||+. +-+|||||-.||++++.|.+|+
T Consensus 88 wicMEycgggslQdiy~~Tg-----------plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvkl 153 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTG-----------PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKL 153 (829)
T ss_pred EEEEEecCCCcccceeeecc-----------cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceee
Confidence 99999999999998876553 789999999999999999999999 9899999999999999999999
Q ss_pred eeecccccccccccccceeccccccccccccCcccC---CCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 821 GDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL---GSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 821 ~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
+|||.+..+...- .....+.||+.|||||+.. .+.|..++|||+.|++..|+-.-++|-....+
T Consensus 154 aDfgvsaqitati----~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp--------- 220 (829)
T KOG0576|consen 154 ADFGVSAQITATI----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--------- 220 (829)
T ss_pred cccCchhhhhhhh----hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch---------
Confidence 9999987654322 1223467999999999853 46788999999999999999887777321100
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
.....-.....+++.-..|...| .+.+-++++.|+.++|++||+++.++.
T Consensus 221 mr~l~LmTkS~~qpp~lkDk~kw-------------------s~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 221 MRALFLMTKSGFQPPTLKDKTKW-------------------SEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred HHHHHHhhccCCCCCcccCCccc-------------------hHHHHHHHHHHhcCCCccCCChhhhee
Confidence 00111111233344334444444 345789999999999999999998764
No 409
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=7.1e-30 Score=261.00 Aligned_cols=149 Identities=22% Similarity=0.263 Sum_probs=75.8
Q ss_pred EEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccccCccccccccccc-c
Q 001974 60 EINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSLYKLKQLAMQR-N 138 (988)
Q Consensus 60 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~-N 138 (988)
..|-++-.++ .+|..+ -..-+.++|..|+|+.+.|.+|+.+.+|+.||||+|+|+.+.|++|.+|.+|.+|-+.+ |
T Consensus 50 ~VdCr~~GL~-eVP~~L--P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~N 126 (498)
T KOG4237|consen 50 IVDCRGKGLT-EVPANL--PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNN 126 (498)
T ss_pred eEEccCCCcc-cCcccC--CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCC
Confidence 3445555555 455443 23455666666666655556666666666666666666655566666666555554444 5
Q ss_pred cccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCccchhhccccCccEEEeccCC
Q 001974 139 NLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLLANFSVPRNQ 211 (988)
Q Consensus 139 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 211 (988)
+|+....+.|++|.+|+.|.+.-|++.-+..++|..|++|..|.|-+|.+..+--.+|..+..++.+.+..|.
T Consensus 127 kI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np 199 (498)
T KOG4237|consen 127 KITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNP 199 (498)
T ss_pred chhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCc
Confidence 5554333444555555555544444444444444444444444444444442222244444444444444443
No 410
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=5.6e-28 Score=241.33 Aligned_cols=280 Identities=21% Similarity=0.241 Sum_probs=200.6
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhcCCCCceEEEeecccccc-cCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNIRHRNLVKVITSCSSIDF-QGN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~-~~~ 737 (988)
...+|.-.+.+|.|.- .|..|-+.-.++.||+|..... .....++..+|...+..+.|+||++++.++..... ..-
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 4567878888999998 7888888888999999987422 23445778899999999999999999998764321 122
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...|+||||| ..+|.+.+.. .++-..+..|..|++.|++|||+. +|+||||||+||++..+..
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~-------------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~ 156 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILM-------------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCT 156 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHH-------------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhh
Confidence 4578999999 7899888762 356667889999999999999999 9999999999999999999
Q ss_pred EEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 818 AHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
+||.|||+|+...... ..+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|. +.....+|.
T Consensus 157 lKi~dfg~ar~e~~~~-----~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ 227 (369)
T KOG0665|consen 157 LKILDFGLARTEDTDF-----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWN 227 (369)
T ss_pred eeeccchhhcccCccc-----ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHH
Confidence 9999999998654431 2233568999999999999889999999999999999999998865 333444443
Q ss_pred HHHHhhh-h-hhhhccc---cc---cCcchhhh-----hhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHH
Q 001974 898 RTALLDH-V-IDIVDPI---LI---NDVEDWDA-----TNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNV 964 (988)
Q Consensus 898 ~~~~~~~-~-~~~~d~~---l~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 964 (988)
...-.-. . ..+.+.. .. ...+.+.. ..+...-....+...-......+++.+||..||++|.|++++
T Consensus 228 ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~da 307 (369)
T KOG0665|consen 228 KIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDA 307 (369)
T ss_pred HHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHH
Confidence 2211100 0 0000000 00 00000000 000000011111111233457899999999999999999999
Q ss_pred HHH
Q 001974 965 VHE 967 (988)
Q Consensus 965 l~~ 967 (988)
++.
T Consensus 308 L~H 310 (369)
T KOG0665|consen 308 LRH 310 (369)
T ss_pred hcC
Confidence 863
No 411
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=1.5e-27 Score=247.91 Aligned_cols=284 Identities=22% Similarity=0.314 Sum_probs=204.2
Q ss_pred HhhCCCCCCceeccccceeEEEEEECC---CCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeeccccccc
Q 001974 660 KATDGFSSTHLIGMGSFGSVYKGAFDQ---DGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 660 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 735 (988)
...+.|..+++||+|+|++||+|.+.. .++.||+|.+... ........|+++|..+ .+.||+++.++ +.
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~-----~r 105 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGC-----FR 105 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhh-----hc
Confidence 344678999999999999999999876 6789999998643 3457789999999999 68999999998 56
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN- 814 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 814 (988)
.++..++|+||++..+..++.. .++..++..+++.+..||+++|.. |||||||||+|++.+.
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~--------------~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~ 168 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYR--------------SLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRR 168 (418)
T ss_pred cCCeeEEEecccCccCHHHHHh--------------cCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccc
Confidence 6799999999999999888874 577889999999999999999999 9999999999999974
Q ss_pred CCcEEEeeecccccccccc------c----------------------------------ccceeccccccccccccCcc
Q 001974 815 DMIAHVGDFGLARVRQEVS------N----------------------------------LTQSCSVGVRGTIGYAAPEY 854 (988)
Q Consensus 815 ~~~~kL~DfG~a~~~~~~~------~----------------------------------~~~~~~~~~~gt~~y~aPE~ 854 (988)
.+.-.|.|||+|...+... . ..........||++|+|||+
T Consensus 169 t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEv 248 (418)
T KOG1167|consen 169 TQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEV 248 (418)
T ss_pred cCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHH
Confidence 5678899999998321110 0 00001123569999999999
Q ss_pred cCC-CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhh---hhhhhccccccC------cc----hh
Q 001974 855 GLG-SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDH---VIDIVDPILIND------VE----DW 920 (988)
Q Consensus 855 ~~~-~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~l~~~------~~----~~ 920 (988)
+.. ...++++||||.||++.-+++++.||-....+-..+...+...-... .....+..+... .. .|
T Consensus 249 L~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f 328 (418)
T KOG1167|consen 249 LFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNF 328 (418)
T ss_pred HhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhch
Confidence 876 45689999999999999999999998655444444443332222221 111222200000 00 00
Q ss_pred hhhhHHHHhh-----hhhccccc-hhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 921 DATNKQRLRQ-----AKINGKIE-CPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 921 ~~~~~~~~~~-----~~~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.....+.... -......+ .+..+.+++.+|+..||.+|.||+|.++.
T Consensus 329 ~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 329 ETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred hccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0000000000 01111122 34578999999999999999999999853
No 412
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=6.5e-28 Score=253.85 Aligned_cols=200 Identities=26% Similarity=0.297 Sum_probs=168.4
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcC------CCCceEEEeeccccccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIR------HRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~ 735 (988)
-.+|.+....|+|-|++|..|.+...|..||||+++... ...+.=+.|+++|+++. --|+++++-. |.
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~-----F~ 504 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRH-----FK 504 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHH-----hh
Confidence 467999999999999999999999899999999997443 23355678999999994 3478888776 45
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
...++|+|+|-+ ..+|.+.++..+.. ..+....+..++.|+.-||..|-.. +|+|.||||+||||.+.
T Consensus 505 hknHLClVFE~L-slNLRevLKKyG~n--------vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 505 HKNHLCLVFEPL-SLNLREVLKKYGRN--------VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNES 572 (752)
T ss_pred hcceeEEEehhh-hchHHHHHHHhCcc--------cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccC
Confidence 569999999998 78999999876542 2577888999999999999999998 99999999999999875
Q ss_pred -CcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCc
Q 001974 816 -MIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDV 885 (988)
Q Consensus 816 -~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~ 885 (988)
..+||||||.|.......... +..+..|.|||++.+-+|+...|+||.||+|||+.||+..|..
T Consensus 573 k~iLKLCDfGSA~~~~eneitP------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENEITP------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred cceeeeccCccccccccccccH------HHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 478999999998765433211 2346689999999999999999999999999999999998864
No 413
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=5e-26 Score=235.46 Aligned_cols=211 Identities=30% Similarity=0.495 Sum_probs=180.5
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeeccc
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTN 749 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~ 749 (988)
||+|++|.||++....+++.+++|++...... ..+.+.+|++.++.++|++++++++++.. ....++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFED-----ENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeec-----CCeEEEEEecCCC
Confidence 68999999999999777999999999754432 34679999999999999999999998543 3788999999998
Q ss_pred cchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-CCcEEEeeeccccc
Q 001974 750 GSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN-DMIAHVGDFGLARV 828 (988)
Q Consensus 750 gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~ 828 (988)
++|.+++.... ..+++..+..++.+++++++|||+. +++|+||+|.||+++. ++.++|+|||.+..
T Consensus 76 ~~l~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~ 142 (215)
T cd00180 76 GSLKDLLKENE----------GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKL 142 (215)
T ss_pred CcHHHHHHhcc----------CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEE
Confidence 99999987542 2578899999999999999999998 9999999999999999 89999999999986
Q ss_pred ccccccccceeccccccccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhh
Q 001974 829 RQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVID 907 (988)
Q Consensus 829 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (988)
...... ......+...|++||..... ..+.++|+|++|++++++
T Consensus 143 ~~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------- 187 (215)
T cd00180 143 LTSDKS----LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------- 187 (215)
T ss_pred ccCCcc----hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------
Confidence 544321 11223478899999998887 788999999999999999
Q ss_pred hhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 908 IVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 908 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.++.+++.+|++.+|++||+++++++.
T Consensus 188 ---------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 126789999999999999999999864
No 414
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2.9e-25 Score=232.36 Aligned_cols=199 Identities=32% Similarity=0.480 Sum_probs=170.3
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc-hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEE
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG-ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
|+..+.||+|++|.||+|....+++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++.. ....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-----~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-----PEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-----CCceEEE
Confidence 56778999999999999999877899999999765444 56789999999999999999999998543 3778999
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDF 823 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 823 (988)
+||+++++|.+++..... .+++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++|+||
T Consensus 76 ~e~~~~~~L~~~~~~~~~----------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~ 142 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGG----------KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADF 142 (225)
T ss_pred EeccCCCCHHHHHHhccc----------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeC
Confidence 999999999999875431 178889999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccceeccccccccccccCccc-CCCCCCCccchHHHHHHHHHHHhCCCCCC
Q 001974 824 GLARVRQEVSNLTQSCSVGVRGTIGYAAPEYG-LGSEVSTNGDIYSYGILLLEMVTGKKPTD 884 (988)
Q Consensus 824 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwslG~vl~elltg~~p~~ 884 (988)
|.+........ .......++..|++||.. ....++.++|||+||+++|||++|+.||.
T Consensus 143 g~~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~ 201 (225)
T smart00221 143 GLARFIHRDLA---ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFS 201 (225)
T ss_pred ceeeEecCccc---ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence 99986654320 011223577889999998 66778889999999999999999999985
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.9e-23 Score=265.17 Aligned_cols=344 Identities=19% Similarity=0.245 Sum_probs=162.1
Q ss_pred ccccCCCCCCEEEcCCCc------ccccCCcccCCCC-CCcEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcc
Q 001974 50 PYIGNLSFLREINLMNNS------IQGEIPREFGRLF-RLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPF 122 (988)
Q Consensus 50 ~~l~~l~~L~~L~L~~n~------l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~ 122 (988)
.+|..+++|+.|.+..+. +...+|+.|..++ +|+.|++.++.++ .+|..| ...+|+.|+|++|++. .++.
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~ 628 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWD 628 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-cccc
Confidence 445566666666665442 2223444444443 3555555555555 445544 2455555555555554 3444
Q ss_pred cccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCccchhhccccCc
Q 001974 123 EFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLL 202 (988)
Q Consensus 123 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L 202 (988)
.+..+++|+.|+|++|.....+|. +..+++|++|+|++|.....+|..+.++++|+.|++++|.
T Consensus 629 ~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~--------------- 692 (1153)
T PLN03210 629 GVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCE--------------- 692 (1153)
T ss_pred ccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCC---------------
Confidence 455555555555554432223332 4445555555555544333444445555555555554432
Q ss_pred cEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccccCCccccEEeccc
Q 001974 203 ANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFGGMKNLSYFNVAY 282 (988)
Q Consensus 203 ~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~ 282 (988)
..+.+|..+ .+++|+.|++++|.....+|.. ..+|+.|++++|.+... |..+ .+++|++|.+.+
T Consensus 693 ---------~L~~Lp~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~l-P~~~-~l~~L~~L~l~~ 756 (1153)
T PLN03210 693 ---------NLEILPTGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEF-PSNL-RLENLDELILCE 756 (1153)
T ss_pred ---------CcCccCCcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccc-cccc-cccccccccccc
Confidence 222444332 3444444444444322222221 12344444444444322 2211 344455554443
Q ss_pred ccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCCccccCCCcceEEEeeCc
Q 001974 283 NNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIPSGIGNLVGLYRLGMGGN 362 (988)
Q Consensus 283 N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 362 (988)
+....... .+. .++......++.|+.|+|++|...+.+|..++.+++|+.|++++|
T Consensus 757 ~~~~~l~~-----------------------~~~-~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C 812 (1153)
T PLN03210 757 MKSEKLWE-----------------------RVQ-PLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENC 812 (1153)
T ss_pred cchhhccc-----------------------ccc-ccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCC
Confidence 32211100 000 011111112234555666655555555666666666666666655
Q ss_pred cCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEccccccccccccccccccccceeecCC-CCCCccCc
Q 001974 363 QFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLAILHLFE-NGLNGTIP 441 (988)
Q Consensus 363 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p 441 (988)
...+.+|..+ ++++|+.|+|++|..-..+|.. .++|+.|+|++|.|+ .+|..+..+++|+.|+|++ |++. .+|
T Consensus 813 ~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~ 886 (1153)
T PLN03210 813 INLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVS 886 (1153)
T ss_pred CCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccC
Confidence 4333455443 4556666666665433334432 245556666666665 4555566666666666655 3333 455
Q ss_pred hhhhhhcccccceecccc
Q 001974 442 EEIFNLTYLSNSLNLARN 459 (988)
Q Consensus 442 ~~~~~l~~l~~~L~ls~N 459 (988)
..+..++.| +.+++++|
T Consensus 887 ~~~~~L~~L-~~L~l~~C 903 (1153)
T PLN03210 887 LNISKLKHL-ETVDFSDC 903 (1153)
T ss_pred cccccccCC-CeeecCCC
Confidence 555555555 55555555
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=4.9e-23 Score=261.53 Aligned_cols=339 Identities=22% Similarity=0.278 Sum_probs=214.9
Q ss_pred chhhccccCccEEEeccCCC------CCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCccc
Q 001974 193 PPSIYNLSLLANFSVPRNQF------HGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLS 266 (988)
Q Consensus 193 ~~~l~~l~~L~~L~L~~N~i------~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~ 266 (988)
+.+|.++++|+.|.+..+.. ...+|..+..-..+|+.|++.+|.+. .+|..+ ...+|+.|++.+|++.. .+
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~-L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEK-LW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccc-cc
Confidence 44556666666666644422 12344443322234666666666665 334444 34566666666666653 34
Q ss_pred ccccCCccccEEeccccc-CCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCC
Q 001974 267 VNFGGMKNLSYFNVAYNN-LGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIP 345 (988)
Q Consensus 267 ~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~ 345 (988)
..+..+++|+.|+|+++. +..++ .++.+++|++|+|++|.....+|..+..+. +|+.|++++|...+.+|
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip--------~ls~l~~Le~L~L~~c~~L~~lp~si~~L~-~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP--------DLSMATNLETLKLSDCSSLVELPSSIQYLN-KLEDLDMSRCENLEILP 698 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC--------ccccCCcccEEEecCCCCccccchhhhccC-CCCEEeCCCCCCcCccC
Confidence 445667777777776653 32222 245567777777777665556777766654 57777777765444666
Q ss_pred ccccCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEccccccc-------ccccc
Q 001974 346 SGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLS-------GVIPS 418 (988)
Q Consensus 346 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-------~~~p~ 418 (988)
..+ .+++|+.|++++|...+.+|.. ..+|+.|+|++|.+. .+|..+ .+++|+.|++.++... ...+.
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~ 772 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPL 772 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchh
Confidence 554 6777777777777655455543 356777777777776 566544 4677777777664321 11222
Q ss_pred ccccccccceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccCCC
Q 001974 419 CLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSY 498 (988)
Q Consensus 419 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 498 (988)
.+...++|+.|+|++|...+.+|..+.+++.| +.|++++|...+.+|..+ ++++|+.|+|++|..-..+|.. ..+
T Consensus 773 ~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L-~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 773 MTMLSPSLTRLFLSDIPSLVELPSSIQNLHKL-EHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred hhhccccchheeCCCCCCccccChhhhCCCCC-CEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccc
Confidence 23334677888888877666778877777777 778887765444677665 6777888888876554455543 356
Q ss_pred CcEEEecCccccccCCccccCccccCeeecCC-CcccCcCcccccCCCCcEEeCCCCc
Q 001974 499 LEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSR-NNLSGLIPKFLEDLSLEYLNLSFND 555 (988)
Q Consensus 499 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~~~L~~l~l~~N~ 555 (988)
|+.|+|++|.++ .+|.++..+++|+.|+|++ |++...++....+..|+.++++++.
T Consensus 848 L~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 848 ISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 778888888887 6777888888888888877 6666665555667778888887764
No 417
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=1.3e-24 Score=268.07 Aligned_cols=204 Identities=14% Similarity=0.196 Sum_probs=139.2
Q ss_pred hcCC-CCceEEEeeccccc--ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHH
Q 001974 716 NIRH-RNLVKVITSCSSID--FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYL 792 (988)
Q Consensus 716 ~l~h-~niv~~~~~~~~~~--~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L 792 (988)
.++| +||++++++|.... ....+..+.++||+ +++|.+++.... ..+++.+++.++.||++||+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~----------~~~~~~~~~~i~~qi~~al~~l 96 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD----------RSVDAFECFHVFRQIVEIVNAA 96 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc----------ccccHHHHHHHHHHHHHHHHHH
Confidence 3455 57888888763221 12234567889988 779999997532 3689999999999999999999
Q ss_pred HcCCCCCeEeccCCCCCeeeCCC-------------------CcEEEeeecccccccccccc------c------ceecc
Q 001974 793 HHHCQEPVLHCDLKPGNVLLDND-------------------MIAHVGDFGLARVRQEVSNL------T------QSCSV 841 (988)
Q Consensus 793 H~~~~~~ivH~Dlkp~NIll~~~-------------------~~~kL~DfG~a~~~~~~~~~------~------~~~~~ 841 (988)
|++ +||||||||+|||++.. +.+|++|||+++........ . .....
T Consensus 97 H~~---gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (793)
T PLN00181 97 HSQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQI 173 (793)
T ss_pred HhC---CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccccc
Confidence 998 99999999999999654 44556666666532110000 0 00011
Q ss_pred ccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhh
Q 001974 842 GVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWD 921 (988)
Q Consensus 842 ~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 921 (988)
...||+.|||||++.+..++.++|||||||++|||++|.+|+.... .... .+. .....+.
T Consensus 174 ~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-------~~~~-~~~---~~~~~~~--------- 233 (793)
T PLN00181 174 LAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-------RTMS-SLR---HRVLPPQ--------- 233 (793)
T ss_pred ccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-------HHHH-HHH---HhhcChh---------
Confidence 2357889999999999999999999999999999999988854210 0000 000 0000000
Q ss_pred hhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 922 ATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.....+...+++.+||+.+|.+||++.|+++.
T Consensus 234 --------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 234 --------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred --------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 00112335688899999999999999999753
No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=4.8e-24 Score=213.68 Aligned_cols=170 Identities=22% Similarity=0.234 Sum_probs=126.2
Q ss_pred cchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccc
Q 001974 750 GSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVR 829 (988)
Q Consensus 750 gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 829 (988)
|+|.++++... ..+++.+++.|+.||+.||+|||+. + ||+||+++.++.+|+ ||.+...
T Consensus 1 GsL~~~l~~~~----------~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~ 59 (176)
T smart00750 1 VSLADILEVRG----------RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFK 59 (176)
T ss_pred CcHHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEee
Confidence 67888886533 3689999999999999999999998 5 999999999999999 9999765
Q ss_pred cccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhh
Q 001974 830 QEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIV 909 (988)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (988)
.... ..|++.|+|||++.+..++.++|||||||++|||+||+.||.........+.... .....
T Consensus 60 ~~~~---------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~-----~~~~~-- 123 (176)
T smart00750 60 TPEQ---------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILL-----NGMPA-- 123 (176)
T ss_pred cccc---------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHH-----HHhcc--
Confidence 4321 2478999999999999999999999999999999999999863221111111110 00000
Q ss_pred ccccccCcchhhhhhHHHHhhhhhccccchh--HHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHHH
Q 001974 910 DPILINDVEDWDATNKQRLRQAKINGKIECP--ISMVRIGVACSVESPQDRMSITNVVHELQSVKNA 974 (988)
Q Consensus 910 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 974 (988)
...... ....... .++.+++.+||+.+|++||++.|+++.+..+..+
T Consensus 124 -----~~~~~~-------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 124 -----DDPRDR-------------SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred -----CCcccc-------------ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 000000 0001122 2589999999999999999999999998887544
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.1e-23 Score=246.65 Aligned_cols=161 Identities=29% Similarity=0.392 Sum_probs=79.5
Q ss_pred cceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEccccccccccccccccccccceeecC
Q 001974 353 GLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLAILHLF 432 (988)
Q Consensus 353 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 432 (988)
+|+.|+|++|+|++ +|..+ .+|+.|++++|+|+ .+|.. ..+|+.|+|++|+|++ +|... .+|+.|+++
T Consensus 303 ~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~-~LP~l---p~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls 370 (788)
T PRK15387 303 GLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLT-SLPTL---PSGLQELSVSDNQLAS-LPTLP---SELYKLWAY 370 (788)
T ss_pred ccceeECCCCcccc-CCCCc---ccccccccccCccc-ccccc---ccccceEecCCCccCC-CCCCC---cccceehhh
Confidence 44444444444442 23211 23444445555554 23321 1245555555555552 33221 234445555
Q ss_pred CCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccCCCCcEEEecCcccccc
Q 001974 433 ENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMRGNFFHGS 512 (988)
Q Consensus 433 ~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 512 (988)
+|+|+ .+|... ..| +.|++++|+|+ .+|... ++|+.|++++|+|+ .+|..+ .+|+.|+|++|+|+ .
T Consensus 371 ~N~L~-~LP~l~---~~L-~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~ 436 (788)
T PRK15387 371 NNRLT-SLPALP---SGL-KELIVSGNRLT-SLPVLP---SELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-R 436 (788)
T ss_pred ccccc-cCcccc---ccc-ceEEecCCccc-CCCCcc---cCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-c
Confidence 55554 344322 223 45555555555 334322 34566666666666 355432 34556666666666 5
Q ss_pred CCccccCccccCeeecCCCcccCcCcc
Q 001974 513 IPSSLSSLRAVLAIDLSRNNLSGLIPK 539 (988)
Q Consensus 513 ~p~~~~~l~~L~~L~ls~N~l~~~~p~ 539 (988)
+|..+..+++|+.|+|++|+|++.+|.
T Consensus 437 LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 437 LPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred cChHHhhccCCCeEECCCCCCCchHHH
Confidence 666666666666666666666665554
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.7e-23 Score=245.24 Aligned_cols=262 Identities=29% Similarity=0.347 Sum_probs=200.8
Q ss_pred ccEEEeccccccCcccccccCCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhhccccc
Q 001974 251 LEFIEALDNSFSGKLSVNFGGMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIANLSDQL 330 (988)
Q Consensus 251 L~~L~l~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~L 330 (988)
-..|++++|.++. +|..+. ++|+.|++++|+++.++. ..++|++|++++|+|+ .+|. .+++|
T Consensus 203 ~~~LdLs~~~Lts-LP~~l~--~~L~~L~L~~N~Lt~LP~----------lp~~Lk~LdLs~N~Lt-sLP~----lp~sL 264 (788)
T PRK15387 203 NAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTSLPA----------LPPELRTLEVSGNQLT-SLPV----LPPGL 264 (788)
T ss_pred CcEEEcCCCCCCc-CCcchh--cCCCEEEccCCcCCCCCC----------CCCCCcEEEecCCccC-cccC----ccccc
Confidence 3456666666663 333343 367777888887776543 1367888888888888 5564 23578
Q ss_pred cEEEccCCccccCCCccccCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEcccc
Q 001974 331 QNLIMTSNQLHGSIPSGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNN 410 (988)
Q Consensus 331 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 410 (988)
+.|++++|+++ .+|.. +.+|+.|++++|+|+ .+|.. +++|+.|+|++|+|++ +|... .+|+.|++++|
T Consensus 265 ~~L~Ls~N~L~-~Lp~l---p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N 332 (788)
T PRK15387 265 LELSIFSNPLT-HLPAL---PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNN 332 (788)
T ss_pred ceeeccCCchh-hhhhc---hhhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccC
Confidence 99999999988 45543 357889999999998 56653 4789999999999995 55532 46888999999
Q ss_pred ccccccccccccccccceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccC
Q 001974 411 SLSGVIPSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIP 490 (988)
Q Consensus 411 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 490 (988)
+|++ +|... .+|+.|+|++|+|+ .+|... ..+ +.|++++|+|+ .+|... .+|+.|+|++|+|+ .+|
T Consensus 333 ~L~~-LP~lp---~~Lq~LdLS~N~Ls-~LP~lp---~~L-~~L~Ls~N~L~-~LP~l~---~~L~~LdLs~N~Lt-~LP 398 (788)
T PRK15387 333 QLTS-LPTLP---SGLQELSVSDNQLA-SLPTLP---SEL-YKLWAYNNRLT-SLPALP---SGLKELIVSGNRLT-SLP 398 (788)
T ss_pred cccc-ccccc---cccceEecCCCccC-CCCCCC---ccc-ceehhhccccc-cCcccc---cccceEEecCCccc-CCC
Confidence 9984 56422 58999999999999 677643 234 77899999998 577643 57899999999999 577
Q ss_pred cccccCCCCcEEEecCccccccCCccccCccccCeeecCCCcccCcCcccccCCCCcEEeCCCCcCcccCCCC
Q 001974 491 SQLGLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGLIPKFLEDLSLEYLNLSFNDLEGEVPTK 563 (988)
Q Consensus 491 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~l~l~~N~l~~~~p~~ 563 (988)
.. .++|+.|++++|+|+ .+|..+ .+|+.|+|++|+|+.++..+..+.+|+.|+|++|+|+|.+|..
T Consensus 399 ~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~ 464 (788)
T PRK15387 399 VL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSERTLQA 464 (788)
T ss_pred Cc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCchHHHH
Confidence 54 367999999999999 578643 4678999999999976656688889999999999999987763
No 421
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.6e-24 Score=210.66 Aligned_cols=247 Identities=23% Similarity=0.343 Sum_probs=190.2
Q ss_pred CCCceeccccceeEEEEEECCCCeEEEEEEeeccc--cchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEE
Q 001974 666 SSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 666 ~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
....+|.+...|+.|+|+| .|..+++|++.... ....++|..|.-.++.+.||||+.++|.|..+ ....++
T Consensus 193 nl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv~i 265 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLVII 265 (448)
T ss_pred hhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCceEe
Confidence 3456788999999999999 55667788876432 33457899999999999999999999998654 678899
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEe-ccCCCCCeeeCCCCcEEEe-
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLH-CDLKPGNVLLDNDMIAHVG- 821 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH-~Dlkp~NIll~~~~~~kL~- 821 (988)
..||+.|+|+..+++... -..+..++.+++.+||+|++|||+.. +++- --+.+..|++|++.+++|+
T Consensus 266 sq~mp~gslynvlhe~t~---------vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarism 334 (448)
T KOG0195|consen 266 SQYMPFGSLYNVLHEQTS---------VVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISM 334 (448)
T ss_pred eeeccchHHHHHHhcCcc---------EEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheec
Confidence 999999999999987653 24677789999999999999999973 4443 4689999999999998874
Q ss_pred -eecccccccccccccceeccccccccccccCcccCCCCCC---CccchHHHHHHHHHHHhCCCCCCccccCCcchHHHH
Q 001974 822 -DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVS---TNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYA 897 (988)
Q Consensus 822 -DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~ 897 (988)
|--++.. ..+..-.+.||+||.++..+.+ .++|+|||++++||+.|...||....+.+.
T Consensus 335 ad~kfsfq-----------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec------ 397 (448)
T KOG0195|consen 335 ADTKFSFQ-----------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC------ 397 (448)
T ss_pred ccceeeee-----------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh------
Confidence 3222211 1123357899999999887654 578999999999999999999975432211
Q ss_pred HHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHH
Q 001974 898 RTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVK 972 (988)
Q Consensus 898 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 972 (988)
..+..+.......++.....+.++|.-|+..||.+||.+..|+-.|+++.
T Consensus 398 -------------------------gmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 398 -------------------------GMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred -------------------------hhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 11111222223345567778899999999999999999999999998763
No 422
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=5.6e-23 Score=223.53 Aligned_cols=170 Identities=24% Similarity=0.202 Sum_probs=131.6
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECC-CCeEEEEEEeecc-----ccchhHHHHHHHHHHHhcCCCCceE-EEeeccc
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQ-DGTIVAIKVFNLQ-----RHGASKSFLAECKALKNIRHRNLVK-VITSCSS 731 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~-~~~~~~~ 731 (988)
....++|++.+.||+|+||+||+|++.. +++.||||++... .....+.+.+|++++++++|+|++. ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3456789999999999999999999875 6788899986532 1223456899999999999999985 4432
Q ss_pred ccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccC-CCCCe
Q 001974 732 IDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDL-KPGNV 810 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NI 810 (988)
+..++||||++|++|... ... . ...++.|+++||+|||+. ||+|||| ||+||
T Consensus 91 ------~~~~LVmE~~~G~~L~~~-~~~--------------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NI 143 (365)
T PRK09188 91 ------GKDGLVRGWTEGVPLHLA-RPH--------------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNW 143 (365)
T ss_pred ------CCcEEEEEccCCCCHHHh-Ccc--------------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceE
Confidence 457999999999999632 110 0 135788999999999998 9999999 99999
Q ss_pred eeCCCCcEEEeeecccccccccccccc----eeccccccccccccCcccCCC
Q 001974 811 LLDNDMIAHVGDFGLARVRQEVSNLTQ----SCSVGVRGTIGYAAPEYGLGS 858 (988)
Q Consensus 811 ll~~~~~~kL~DfG~a~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~ 858 (988)
|++.++.+||+|||+|+.......... .......+++.|+|||++...
T Consensus 144 Lv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 144 LMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred EEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 999999999999999987654331111 111345688899999997654
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1e-21 Score=215.70 Aligned_cols=267 Identities=22% Similarity=0.261 Sum_probs=200.5
Q ss_pred CCCCCceeccccceeEEEEEECCCC-eEEEEEEeeccccchhHHHHHHHHHHHhcCC----CCceEEEeecccccccCCC
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDG-TIVAIKVFNLQRHGASKSFLAECKALKNIRH----RNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~~~ 738 (988)
+|.+.+.||+|+||.||.|.+..++ +.+|+|+...........+..|+.++..+.. +++..+++... ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 7999999999999999999997654 6789998765433333378889999988862 68888888732 3457
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC---
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND--- 815 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~--- 815 (988)
..++||+.+ |.+|.++...... +.++..++..|+.|++.+|++||+. |++||||||.|+++...
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~---------~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~ 161 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPP---------GRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRS 161 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCC---------CCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCc
Confidence 789999999 9999998765541 4799999999999999999999999 99999999999999865
Q ss_pred --CcEEEeeecccc--cccccccc---ccee-ccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccc
Q 001974 816 --MIAHVGDFGLAR--VRQEVSNL---TQSC-SVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMF 887 (988)
Q Consensus 816 --~~~kL~DfG~a~--~~~~~~~~---~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~ 887 (988)
..+.+.|||+|+ ........ .... .....||..|+++....+...+.+.|+||++.++.|+..|..||....
T Consensus 162 ~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 162 EVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred ccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 469999999998 32222211 1111 234569999999999999999999999999999999999999986432
Q ss_pred cCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 888 EGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
.... ....... ... ..... .....|.++.++...+-..+..++|....+...
T Consensus 242 ~~~~-~~~~~~~-~~~---~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 242 MTDL-KSKFEKD-PRK---LLTDR-----------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred ccch-HHHHHHH-hhh---hcccc-----------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 2111 0000000 000 00000 112345667777777777999999999999999
Q ss_pred HHHHHHHh
Q 001974 968 LQSVKNAL 975 (988)
Q Consensus 968 L~~i~~~~ 975 (988)
++....+.
T Consensus 294 l~~~~~~~ 301 (322)
T KOG1164|consen 294 LKDVFDSE 301 (322)
T ss_pred HHHHHHhc
Confidence 88876664
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=6.3e-22 Score=189.79 Aligned_cols=269 Identities=21% Similarity=0.264 Sum_probs=198.5
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCC-CCceEEEeecccccccCCCc
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRH-RNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~ 739 (988)
....|.++++||.|+||.+|.|....+|+.||+|+-+... ....+..|.++.+.+++ ..|..+..+ ..+..+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y-----~~e~~y 85 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHY-----GTEKDY 85 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhh-----cccccc
Confidence 3467999999999999999999999999999999864332 23567889999999965 566666655 334577
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC---CC
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN---DM 816 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~---~~ 816 (988)
-.+||+.. |.+|.+.+.-+. +.++..+++-+|-|++.-++|+|.+ ++|||||||+|+|+.- -.
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~----------R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~ 151 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCS----------RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCN 151 (341)
T ss_pred ceeeeecc-CccHHHHHHHHh----------hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccc
Confidence 78999999 999999887654 4789999999999999999999999 9999999999999963 34
Q ss_pred cEEEeeecccccccccccc---cceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 817 IAHVGDFGLARVRQEVSNL---TQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
.+.++|||+|+.+.+.... .........||.+|.+--...+...+.+.|+=|+|.++.++--|..||+......
T Consensus 152 kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t--- 228 (341)
T KOG1163|consen 152 KLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT--- 228 (341)
T ss_pred eEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh---
Confidence 7899999999876554322 2222344579999999888878788899999999999999999999998543221
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
.....+.+.+. ... -+...-....|.++.-.+.-|-..--++-|...-+-+...-+..
T Consensus 229 ----k~QKyEkI~Ek---K~s---------------~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 229 ----KKQKYEKISEK---KMS---------------TPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred ----HHHHHHHHHHh---hcC---------------CCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 11111111110 000 00001122456677777778888888888887766666555554
Q ss_pred Hh
Q 001974 974 AL 975 (988)
Q Consensus 974 ~~ 975 (988)
.+
T Consensus 287 ~l 288 (341)
T KOG1163|consen 287 TL 288 (341)
T ss_pred hc
Confidence 43
No 425
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.3e-21 Score=196.29 Aligned_cols=266 Identities=19% Similarity=0.243 Sum_probs=200.3
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccCCCceE
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
-.|.+.++||+|+||+++.|..--+++.||||.-... ....++..|.+..+.+ ..+.|..+|.+ .+.+.+-.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYF-----GqeG~~Ni 100 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYF-----GQEGKYNI 100 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeee-----ccccchhh
Confidence 4689999999999999999999889999999986433 2346788899999988 56899988876 45567778
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC-----
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM----- 816 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----- 816 (988)
+|+|.. |.+|.|++.-++ ++++..++..+|.|++.-++|+|++ .+|.|||||+|+||...+
T Consensus 101 LVidLL-GPSLEDLFD~Cg----------R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n 166 (449)
T KOG1165|consen 101 LVIDLL-GPSLEDLFDLCG----------RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDAN 166 (449)
T ss_pred hhhhhh-CcCHHHHHHHhc----------CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCc
Confidence 999999 899998887665 5899999999999999999999999 999999999999997544
Q ss_pred cEEEeeeccccccccccccc---ceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcch
Q 001974 817 IAHVGDFGLARVRQEVSNLT---QSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNL 893 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~ 893 (988)
.+.++|||+|+.+.+..... ........||.+||+--...+.+.+.+.|+=|+|-++++.+-|..||+..... ..-
T Consensus 167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-tnK 245 (449)
T KOG1165|consen 167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-TNK 245 (449)
T ss_pred eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-chH
Confidence 58899999999776544321 22233456999999999999999999999999999999999999999853221 111
Q ss_pred HHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 894 HNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 894 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
..+ +.+.+ ....... +. -....|.++..-+.-.-..+-.+-|..+-+...+.++.+
T Consensus 246 ~kY------eKIGe---~Kr~T~i--------~~-------Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 246 EKY------EKIGE---TKRSTPI--------EV-------LCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HHH------HHhcc---ccccCCH--------HH-------HHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 111 11111 0000000 00 012356666666666667788888887766666666655
Q ss_pred H
Q 001974 974 A 974 (988)
Q Consensus 974 ~ 974 (988)
.
T Consensus 302 r 302 (449)
T KOG1165|consen 302 R 302 (449)
T ss_pred h
Confidence 4
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1e-22 Score=236.60 Aligned_cols=258 Identities=22% Similarity=0.266 Sum_probs=193.2
Q ss_pred CCCceeccccceeEEEEEECCCCeEEEEEEeecc--ccch----hHHHHHHHHHHHhcCCCCceEEEeecccccccCCCc
Q 001974 666 SSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RHGA----SKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 666 ~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 739 (988)
...+.+|.|++|.|+.+......+.++.|.++.. .... ...+..|+.+-..++|+|++..+..+... ..
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DG 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----cc
Confidence 3467899999998888888766666666655311 1111 12256677778888999998877765443 23
Q ss_pred eEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEE
Q 001974 740 KALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAH 819 (988)
Q Consensus 740 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 819 (988)
..-+||||++ +|..++.... .++..++..+++|+..|++|+|+. ||.|||+|++|++++.+|.+|
T Consensus 396 ~~~~mE~~~~-Dlf~~~~~~~-----------~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lk 460 (601)
T KOG0590|consen 396 ILQSMEYCPY-DLFSLVMSNG-----------KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILK 460 (601)
T ss_pred chhhhhcccH-HHHHHHhccc-----------ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceE
Confidence 3334999998 9999987652 578888999999999999999999 999999999999999999999
Q ss_pred EeeecccccccccccccceeccccccccccccCcccCCCCCCC-ccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHH
Q 001974 820 VGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVST-NGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYAR 898 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~ 898 (988)
|+|||.+....-..........+.+|+.+|+|||.+.+..|++ ..||||.|+++..|.+|+.||......+..+.....
T Consensus 461 i~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~ 540 (601)
T KOG0590|consen 461 IIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY 540 (601)
T ss_pred EeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc
Confidence 9999999876655544445667788999999999999999976 479999999999999999999866555433200000
Q ss_pred HHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 899 TALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 899 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
..|. .............|.+.+.+|.+|++.||.+|.|+++|++.
T Consensus 541 -------------------~~~~-----~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 541 -------------------SDQR-----NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred -------------------cccc-----ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 0000 00000001112566778999999999999999999999864
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=2.5e-21 Score=229.04 Aligned_cols=279 Identities=23% Similarity=0.401 Sum_probs=150.5
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecC
Q 001974 33 RVTVLNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLG 112 (988)
Q Consensus 33 ~v~~l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (988)
..+.|++++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|++|+|++|+|+ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 4566777777766 4555443 35677777777777 4554442 46777777777776 5555443 357777777
Q ss_pred cccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCcc
Q 001974 113 RNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGII 192 (988)
Q Consensus 113 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 192 (988)
+|++. .+|..+. ++|+.|+|++|+|+ .+|+.+. .+|+.|++++|+++ .+|..+. ++|+.|+|++|+++. +
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-L 319 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA-L 319 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-C
Confidence 77776 4555443 35677777777766 4555443 36677777777666 3444332 356666666666663 3
Q ss_pred chhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccccCC
Q 001974 193 PPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFGGM 272 (988)
Q Consensus 193 ~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~l 272 (988)
|..+. ++|+.|++++|.++ .+|..+. ++|+.|++++|+|+ .+|..+ .
T Consensus 320 P~~l~--~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~L~-~LP~~l--------------------------p 366 (754)
T PRK15370 320 PETLP--PGLKTLEAGENALT-SLPASLP---PELQVLDVSKNQIT-VLPETL--------------------------P 366 (754)
T ss_pred Ccccc--ccceeccccCCccc-cCChhhc---CcccEEECCCCCCC-cCChhh--------------------------c
Confidence 33322 45666666666665 4554432 45555555555554 233222 1
Q ss_pred ccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhhc---cccccEEEccCCccccCCCcccc
Q 001974 273 KNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIANL---SDQLQNLIMTSNQLHGSIPSGIG 349 (988)
Q Consensus 273 ~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~---~~~L~~L~L~~N~l~~~~~~~~~ 349 (988)
++|+.|++++|+|+.++.. +. ..|+.|++++|+++ .+|..+..+ .+.+..|++.+|.+.. .
T Consensus 367 ~~L~~LdLs~N~Lt~LP~~-------l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~ 430 (754)
T PRK15370 367 PTITTLDVSRNALTNLPEN-------LP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------R 430 (754)
T ss_pred CCcCEEECCCCcCCCCCHh-------HH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------H
Confidence 3455555555555543321 00 23555556666655 455444332 1345667777776651 2
Q ss_pred CCCcceEEEeeCccCCC-ccCcccCCCCccCe
Q 001974 350 NLVGLYRLGMGGNQFTG-TIPKEMGKLQNLEG 380 (988)
Q Consensus 350 ~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~ 380 (988)
.+.+|+.| ++.+.+.| .++...+.+.+++.
T Consensus 431 tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~~ 461 (754)
T PRK15370 431 TIQNMQRL-MSSVGYQGPRVLFAMGDFSIVRV 461 (754)
T ss_pred HHHHHHHh-hhcccccCCcccccccccccccc
Confidence 34444444 33344432 23333444444444
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=2.3e-21 Score=229.30 Aligned_cols=201 Identities=23% Similarity=0.431 Sum_probs=107.8
Q ss_pred CcEEEeecccCCCCCCchhhhccccccEEEccCCccccCCCccccCCCcceEEEeeCccCCCccCcccCCCCccCeEecc
Q 001974 305 LRTLIFAANKLRGALPHSIANLSDQLQNLIMTSNQLHGSIPSGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLY 384 (988)
Q Consensus 305 L~~L~Ls~N~l~~~~p~~~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 384 (988)
|+.|+|++|++. .+|..+. ..|+.|++++|+|+ .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+++
T Consensus 243 L~~L~Ls~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls 312 (754)
T PRK15370 243 IQEMELSINRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQ 312 (754)
T ss_pred ccEEECcCCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhc
Confidence 444444444444 3343332 24555555555555 3444332 35556666666555 3343332 345666666
Q ss_pred cccCCCCCCCCCCCCCCCCEEEccccccccccccccccccccceeecCCCCCCccCchhhhhhcccccceecccccccCC
Q 001974 385 DNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGS 464 (988)
Q Consensus 385 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~ 464 (988)
+|+++ .+|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+. +.| +.|++++|+|+ .
T Consensus 313 ~N~Lt-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L-~~LdLs~N~Lt-~ 381 (754)
T PRK15370 313 SNSLT-ALPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTI-TTLDVSRNALT-N 381 (754)
T ss_pred CCccc-cCCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCc-CEEECCCCcCC-C
Confidence 66665 3443332 456666666666663 444443 46666666666665 5555442 344 66666666666 4
Q ss_pred CccccccccccceeecCCcccccccCccc----ccCCCCcEEEecCccccccCCccccCccccCeeecCCCcccCc
Q 001974 465 IPTKIGNLKYLRVFNVSSNNLSGEIPSQL----GLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGL 536 (988)
Q Consensus 465 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 536 (988)
+|..+. ..|+.|++++|+|+ .+|..+ +.++.+..|+|.+|.|+. ..+.+|+.| ++.+.+.|.
T Consensus 382 LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp 447 (754)
T PRK15370 382 LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGP 447 (754)
T ss_pred CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCC
Confidence 454443 25677777777776 455433 345677788888887762 344555555 444555543
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.82 E-value=1.9e-20 Score=188.55 Aligned_cols=175 Identities=13% Similarity=0.145 Sum_probs=133.8
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHH---------HHHHHHHHHhcCCCCceEEEeecccc
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKS---------FLAECKALKNIRHRNLVKVITSCSSI 732 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~h~niv~~~~~~~~~ 732 (988)
..+|...+.+|.|+||.||++.. ++..+|+|+++......... +.+|+..+.++.|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 57899999999999999999766 56789999997543322222 68999999999999999998875432
Q ss_pred c---ccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCC
Q 001974 733 D---FQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGN 809 (988)
Q Consensus 733 ~---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~N 809 (988)
. +......++||||++|.+|.++.. ++. ....+++.++..+|+. |++|||++|+|
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~N 165 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE---------------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGN 165 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh---------------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHH
Confidence 1 112356899999999999987731 222 2456999999999999 99999999999
Q ss_pred eeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHH
Q 001974 810 VLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMV 877 (988)
Q Consensus 810 Ill~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ell 877 (988)
|+++.++ ++|+|||........... ..+.....+..++|+||||+++..+.
T Consensus 166 ili~~~g-i~liDfg~~~~~~e~~a~----------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 166 FIVSKNG-LRIIDLSGKRCTAQRKAK----------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEeCCC-EEEEECCCcccccchhhH----------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999988 999999988754322111 11334445667999999999887654
No 430
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=3.9e-19 Score=198.94 Aligned_cols=264 Identities=27% Similarity=0.384 Sum_probs=193.6
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc---hhHHHHHHHHHHHhcCCC-CceEEEeecccccccCCCce
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG---ASKSFLAECKALKNIRHR-NLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~~~~~~~~~~~~~~~~~ 740 (988)
|...+.||.|+||.||++.+. ..+++|.+...... ....+.+|+.+++.+.|+ +++++++++. .....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQ-----DEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEe-----cCCEE
Confidence 677889999999999999996 78899998644332 357899999999999888 7999999852 33557
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC-cEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM-IAH 819 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~k 819 (988)
+++++|+.++++.+++...... ..+.......++.|++.+++|+|+. +++|||+||+||+++..+ .++
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~ 142 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK--------GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVK 142 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc--------cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEE
Confidence 9999999999999777654311 2578889999999999999999999 999999999999999988 799
Q ss_pred Eeeecccccccccccccc--eeccccccccccccCcccCC---CCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 820 VGDFGLARVRQEVSNLTQ--SCSVGVRGTIGYAAPEYGLG---SEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
++|||.+........... .......|+..|+|||.+.+ ..++...|+||+|++++++++|..||...... ...
T Consensus 143 l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~--~~~ 220 (384)
T COG0515 143 LIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS--SAT 220 (384)
T ss_pred EeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc--ccH
Confidence 999999985544322111 12344679999999999987 57889999999999999999999996533211 000
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHE 967 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 967 (988)
......+....... ......... .......+.+++..|+..+|..|.++.+....
T Consensus 221 ~~~~~~~~~~~~~~---~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 221 SQTLKIILELPTPS---LASPLSPSN---------------PELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHHHHhcCCcc---cccccCccc---------------cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00101000000000 000000000 01123467899999999999999999887765
No 431
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=1.5e-20 Score=215.60 Aligned_cols=249 Identities=20% Similarity=0.230 Sum_probs=176.5
Q ss_pred CCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc-hhHHHHHHHHH--HHhcCCCCceEEEeecccccccCCCce
Q 001974 664 GFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG-ASKSFLAECKA--LKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 664 ~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~--l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
+|...+.+|.+.|=+|.+|++. .|. |+||++-..++. ..+.+.++++- ...++|||++++.-+ ...+...
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~-----~~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKV-----LVTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHH-----HHhhHHH
Confidence 6778899999999999999995 454 999999655432 22344443333 444599999998766 3345777
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
|+|-+|. .-+|+|.+.... -+...+.+.|+.|++.|+..+|.. ||+|||||.+||||+.-.-+.|
T Consensus 97 ylvRqyv-khnLyDRlSTRP-----------FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~L 161 (1431)
T KOG1240|consen 97 YLVRQYV-KHNLYDRLSTRP-----------FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYL 161 (1431)
T ss_pred HHHHHHH-hhhhhhhhccch-----------HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhh
Confidence 8999998 679999997654 367778889999999999999999 9999999999999999999999
Q ss_pred eeeccccc--ccc--cccccceeccccccccccccCcccCCC----------C-CCCccchHHHHHHHHHHHh-CCCCCC
Q 001974 821 GDFGLARV--RQE--VSNLTQSCSVGVRGTIGYAAPEYGLGS----------E-VSTNGDIYSYGILLLEMVT-GKKPTD 884 (988)
Q Consensus 821 ~DfG~a~~--~~~--~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDvwslG~vl~ellt-g~~p~~ 884 (988)
+||..-+. ..+ ...+..... +...-..|.|||.+... . .+++.||||+||++.|+++ |++||.
T Consensus 162 tDFAsFKPtYLPeDNPadf~fFFD-TSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~ 240 (1431)
T KOG1240|consen 162 TDFASFKPTYLPEDNPADFTFFFD-TSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT 240 (1431)
T ss_pred hcccccCCccCCCCCcccceEEEe-cCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence 99976542 111 222222221 22234579999976431 2 5788999999999999999 899986
Q ss_pred ccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHH
Q 001974 885 VMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNV 964 (988)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 964 (988)
.. +.....-... +. ..+.+ +...+ ..+++++..|++.||++|.+|++.
T Consensus 241 LS--------QL~aYr~~~~--------------~~---~e~~L-----e~Ied--~~~Rnlil~Mi~rdPs~RlSAedy 288 (1431)
T KOG1240|consen 241 LS--------QLLAYRSGNA--------------DD---PEQLL-----EKIED--VSLRNLILSMIQRDPSKRLSAEDY 288 (1431)
T ss_pred HH--------HHHhHhccCc--------------cC---HHHHH-----HhCcC--ccHHHHHHHHHccCchhccCHHHH
Confidence 32 1110000000 00 00000 00111 247899999999999999999999
Q ss_pred HHH
Q 001974 965 VHE 967 (988)
Q Consensus 965 l~~ 967 (988)
++.
T Consensus 289 L~~ 291 (1431)
T KOG1240|consen 289 LQK 291 (1431)
T ss_pred HHh
Confidence 977
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=9.6e-20 Score=182.60 Aligned_cols=140 Identities=19% Similarity=0.169 Sum_probs=107.0
Q ss_pred CceeccccceeEEEEEECCCCeEEEEEEeeccccch---------h-----------------HHHHHHHHHHHhcCCCC
Q 001974 668 THLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA---------S-----------------KSFLAECKALKNIRHRN 721 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~---------~-----------------~~~~~E~~~l~~l~h~n 721 (988)
...||+|++|.||+|... +|+.||||+++...... . .....|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 89999999997542210 0 12235999999998776
Q ss_pred ceEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHH-HcCCCCCe
Q 001974 722 LVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYL-HHHCQEPV 800 (988)
Q Consensus 722 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~i 800 (988)
+.....+. . ...++||||++++++....... .+++..++..++.|++.+|+|+ |+. +|
T Consensus 81 v~~p~~~~----~---~~~~iVmE~i~g~~l~~~~~~~-----------~~~~~~~~~~i~~qi~~~L~~l~H~~---gi 139 (190)
T cd05147 81 IPCPEPIL----L---KSHVLVMEFIGDDGWAAPRLKD-----------APLSESKARELYLQVIQIMRILYQDC---RL 139 (190)
T ss_pred CCCCcEEE----e---cCCEEEEEEeCCCCCcchhhhc-----------CCCCHHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 63322221 0 2238999999887665443221 2578889999999999999999 687 99
Q ss_pred EeccCCCCCeeeCCCCcEEEeeeccccccc
Q 001974 801 LHCDLKPGNVLLDNDMIAHVGDFGLARVRQ 830 (988)
Q Consensus 801 vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 830 (988)
+||||||+||+++ ++.++|+|||+|....
T Consensus 140 iHrDlkP~NIli~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 140 VHADLSEYNLLYH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred ccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence 9999999999998 4789999999997543
No 433
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=8.9e-20 Score=187.19 Aligned_cols=205 Identities=22% Similarity=0.223 Sum_probs=145.1
Q ss_pred CCCCceEEEeecccc----------------------cccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCH
Q 001974 718 RHRNLVKVITSCSSI----------------------DFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTL 775 (988)
Q Consensus 718 ~h~niv~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~ 775 (988)
+|||||++.++|.+. ....+...|+||..+ ..+|++|+.... .+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~------------~s~ 340 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH------------RSY 340 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC------------Cch
Confidence 699999999876433 123345678999988 679999987653 456
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeee--CCCC--cEEEeeeccccccccccc--ccceecccccccccc
Q 001974 776 LQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLL--DNDM--IAHVGDFGLARVRQEVSN--LTQSCSVGVRGTIGY 849 (988)
Q Consensus 776 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll--~~~~--~~kL~DfG~a~~~~~~~~--~~~~~~~~~~gt~~y 849 (988)
....-|..|+++|+.|||.+ ||.|||+|++||++ |+|+ .+.++|||++--.+...- ...+.....-|...-
T Consensus 341 r~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~l 417 (598)
T KOG4158|consen 341 RTGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKL 417 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCccee
Confidence 66778999999999999999 99999999999999 4444 578999998854332111 111112233477889
Q ss_pred ccCcccCCCC------CCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhh
Q 001974 850 AAPEYGLGSE------VSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDAT 923 (988)
Q Consensus 850 ~aPE~~~~~~------~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 923 (988)
||||+....+ -..|+|.|+.|.+.||+++...||..-.+..-+...|-
T Consensus 418 mAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq-------------------------- 471 (598)
T KOG4158|consen 418 MAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ-------------------------- 471 (598)
T ss_pred cchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh--------------------------
Confidence 9999976532 13589999999999999999999863111100000000
Q ss_pred hHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHH
Q 001974 924 NKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQ 969 (988)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 969 (988)
+...+.-+..+|+.+++++...++.||.+|+++.-....|.
T Consensus 472 -----e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 472 -----ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred -----hhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 00111234568889999999999999999999876666553
No 434
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=1.4e-21 Score=177.46 Aligned_cols=164 Identities=32% Similarity=0.592 Sum_probs=118.2
Q ss_pred cccCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEcccccccccccccccccccc
Q 001974 347 GIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQL 426 (988)
Q Consensus 347 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 426 (988)
.+..+...+.|.||+|+++ .+|..++.+.+|+.|++++|+|. .+|..++.+++|+.|+++-|++. +.|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3556778888999999998 77888999999999999999998 78888999999999999999998 889999999999
Q ss_pred ceeecCCCCCC-ccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccCCCCcEEEec
Q 001974 427 AILHLFENGLN-GTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMR 505 (988)
Q Consensus 427 ~~L~l~~N~l~-~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~ 505 (988)
+.|||+.|++. ..+|..|+.++.+ ..|.|+.|.+. .+|..++.|++|+.|.+..|.+- .+|.+++.+..|++|.++
T Consensus 105 evldltynnl~e~~lpgnff~m~tl-ralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTL-RALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred hhhhccccccccccCCcchhHHHHH-HHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcc
Confidence 99999998887 3456666666655 55555555554 55555555555555555555554 455555555555555555
Q ss_pred CccccccCCccc
Q 001974 506 GNFFHGSIPSSL 517 (988)
Q Consensus 506 ~N~l~~~~p~~~ 517 (988)
+|+++ .+|..+
T Consensus 182 gnrl~-vlppel 192 (264)
T KOG0617|consen 182 GNRLT-VLPPEL 192 (264)
T ss_pred cceee-ecChhh
Confidence 55544 444433
No 435
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=6.9e-20 Score=190.19 Aligned_cols=242 Identities=19% Similarity=0.256 Sum_probs=150.5
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCC----------CCceEEEeeccc
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRH----------RNLVKVITSCSS 731 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h----------~niv~~~~~~~~ 731 (988)
+...+.||.|+++.||.+++..+++.+|||++..... ...+++.+|.-....+.+ -.++-.++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 4456789999999999999999999999999864332 233556666654444322 122221211110
Q ss_pred ---ccc----cCCC-----ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCC
Q 001974 732 ---IDF----QGND-----FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEP 799 (988)
Q Consensus 732 ---~~~----~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 799 (988)
..+ .+.. ..+++|+-+ .+||.+++..-...... ...+....+..+..|+++.+++||+. |
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~----~~~l~~~arl~lT~Q~I~lvA~Lh~~---G 165 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT----HSPLAFAARLSLTVQMIRLVANLHSY---G 165 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT----SHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc----cchhHHHHHHHHHHHHHHHHHHHhhc---c
Confidence 000 0001 236788888 78888776421100000 12344556778889999999999999 9
Q ss_pred eEeccCCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCC--------CCCCCccchHHHHH
Q 001974 800 VLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLG--------SEVSTNGDIYSYGI 871 (988)
Q Consensus 800 ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwslG~ 871 (988)
+||+||+|+|++++.+|.++|+||+.....+..... ...+..|.+||.... -.++.+.|.|++|+
T Consensus 166 lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-------~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~ 238 (288)
T PF14531_consen 166 LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-------SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGI 238 (288)
T ss_dssp EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-------GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHH
T ss_pred eEecccceeeEEEcCCCCEEEcChHHHeecCceeec-------cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHH
Confidence 999999999999999999999999988754432111 224578999997533 25788999999999
Q ss_pred HHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhccc
Q 001974 872 LLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACS 951 (988)
Q Consensus 872 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 951 (988)
++|.|++|..||+.......... +| ....+.|+.+..||..+|
T Consensus 239 ~ly~lWC~~lPf~~~~~~~~~~~------------------------~f-------------~~C~~~Pe~v~~LI~~lL 281 (288)
T PF14531_consen 239 TLYSLWCGRLPFGLSSPEADPEW------------------------DF-------------SRCRDMPEPVQFLIRGLL 281 (288)
T ss_dssp HHHHHHHSS-STCCCGGGSTSGG------------------------GG-------------TTSS---HHHHHHHHHHT
T ss_pred HHHHHHHccCCCCCCCccccccc------------------------cc-------------hhcCCcCHHHHHHHHHHc
Confidence 99999999999985432211000 01 112278889999999999
Q ss_pred CcCCCCC
Q 001974 952 VESPQDR 958 (988)
Q Consensus 952 ~~dP~~R 958 (988)
+.+|++|
T Consensus 282 ~~~~~~R 288 (288)
T PF14531_consen 282 QRNPEDR 288 (288)
T ss_dssp -SSGGGS
T ss_pred cCCcccC
Confidence 9999988
No 436
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=4e-21 Score=174.62 Aligned_cols=163 Identities=32% Similarity=0.503 Sum_probs=93.7
Q ss_pred ccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccccCccccc
Q 001974 52 IGNLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSLYKLK 131 (988)
Q Consensus 52 l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 131 (988)
+.++.+++.|-||+|+++ .+|..+.++.+|+.|++++|+|+ .+|..++.++.|+.|+++-|++. +.|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 444455555555555555 44455555555556666666555 55555555555666665555555 5555555556666
Q ss_pred cccccccccc-CCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccCccchhhccccCccEEEeccC
Q 001974 132 QLAMQRNNLT-GGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLLANFSVPRN 210 (988)
Q Consensus 132 ~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 210 (988)
.|+|..|++. ..+|..|..++.|+-|+|++|.+. .+|..++++++|+.|.+++|.+- .+|..++.+..|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 6666555554 245555555555666666666555 45555566666666666665555 45556666666666666666
Q ss_pred CCCCCCCCcc
Q 001974 211 QFHGSLPPSL 220 (988)
Q Consensus 211 ~i~~~lp~~~ 220 (988)
+++ .+|+.+
T Consensus 184 rl~-vlppel 192 (264)
T KOG0617|consen 184 RLT-VLPPEL 192 (264)
T ss_pred eee-ecChhh
Confidence 665 555433
No 437
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=8.8e-19 Score=176.75 Aligned_cols=140 Identities=19% Similarity=0.153 Sum_probs=109.3
Q ss_pred CceeccccceeEEEEEECCCCeEEEEEEeeccccch--------------------------hHHHHHHHHHHHhcCCCC
Q 001974 668 THLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA--------------------------SKSFLAECKALKNIRHRN 721 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~h~n 721 (988)
...||+|++|.||+|++. +|+.||||+++...... ...+..|++.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 478999999999999987 89999999997542110 112457899999999988
Q ss_pred ceEEEeecccccccCCCceEEEEeeccccchhhh-cCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHc-CCCCC
Q 001974 722 LVKVITSCSSIDFQGNDFKALVYEFMTNGSLENW-LHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHH-HCQEP 799 (988)
Q Consensus 722 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ 799 (988)
+.....+.. ...++||||++++++... +.. .+++..++..++.|++.++.++|+ . |
T Consensus 81 i~~p~~~~~-------~~~~lVmE~~~g~~~~~~~l~~------------~~~~~~~~~~i~~~l~~~l~~lH~~~---g 138 (190)
T cd05145 81 VPVPEPILL-------KKNVLVMEFIGDDGSPAPRLKD------------VPLEEEEAEELYEQVVEQMRRLYQEA---G 138 (190)
T ss_pred CCCceEEEe-------cCCEEEEEEecCCCchhhhhhh------------ccCCHHHHHHHHHHHHHHHHHHHHhC---C
Confidence 744333211 224899999988754332 221 256778899999999999999999 8 9
Q ss_pred eEeccCCCCCeeeCCCCcEEEeeecccccccc
Q 001974 800 VLHCDLKPGNVLLDNDMIAHVGDFGLARVRQE 831 (988)
Q Consensus 800 ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 831 (988)
|+||||||+||+++ ++.++|+|||+|.....
T Consensus 139 ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 139 LVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 99999999999999 88999999999986543
No 438
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=9.7e-19 Score=171.80 Aligned_cols=187 Identities=15% Similarity=0.051 Sum_probs=136.8
Q ss_pred CCCceeccccceeEEEEEECCCCeEEEEEEeecccc----chhHHHHHHHHHHHhcC-CCCceEEEeecccccccCCCce
Q 001974 666 SSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH----GASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 666 ~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 740 (988)
.+...|++|+||+||.+.. .+..++.+.+..... .....+.+|+++|+++. |+++++++++ +..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 4578999999999998766 778888777653322 11225889999999994 5889999887 446
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccC-CCCCeeeCCCCcEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDL-KPGNVLLDNDMIAH 819 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-kp~NIll~~~~~~k 819 (988)
+++|||++|.+|...... ....++.|++.+++++|+. ||+|||| ||+||+++.++.++
T Consensus 74 ~lvmeyI~G~~L~~~~~~------------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~ 132 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR------------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPA 132 (218)
T ss_pred EEEEeeecCccHHhhhhh------------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEE
Confidence 899999999888644311 1134778999999999999 9999999 79999999999999
Q ss_pred Eeeecccccccccccccce-e--------ccccccccccccCcccCC-CCCC-CccchHHHHHHHHHHHhCCCCCC
Q 001974 820 VGDFGLARVRQEVSNLTQS-C--------SVGVRGTIGYAAPEYGLG-SEVS-TNGDIYSYGILLLEMVTGKKPTD 884 (988)
Q Consensus 820 L~DfG~a~~~~~~~~~~~~-~--------~~~~~gt~~y~aPE~~~~-~~~~-~~sDvwslG~vl~elltg~~p~~ 884 (988)
|+|||+|............ . ..-...++.|++|+...- ...+ ...+.++-|+-+|.++|+..|+-
T Consensus 133 LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 133 VIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred EEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 9999999855432211000 0 001125667777764322 1223 56789999999999999988854
No 439
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.78 E-value=6.1e-19 Score=194.66 Aligned_cols=218 Identities=25% Similarity=0.398 Sum_probs=162.0
Q ss_pred HHhcCCCCceEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHH
Q 001974 714 LKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLH 793 (988)
Q Consensus 714 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH 793 (988)
|+.+.|.|+.+++|.+... ...++|.+||..|+|.+.+.... .++++.....+.++|+.||+|+|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~----------~~~d~~F~~s~~rdi~~Gl~ylh 65 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNED----------IKLDYFFILSFIRDISKGLAYLH 65 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccc----------cCccHHHHHHHHHHHHHHHHHHh
Confidence 3567899999999997653 78899999999999999998744 47899999999999999999999
Q ss_pred cCCCCCe-EeccCCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCC-------CCCCccc
Q 001974 794 HHCQEPV-LHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGS-------EVSTNGD 865 (988)
Q Consensus 794 ~~~~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sD 865 (988)
+. +| +|+.++++|+++|..+.+||+|||+........ .........-..-|.|||.+... ..+.++|
T Consensus 66 ~s---~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~--~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gd 140 (484)
T KOG1023|consen 66 NS---PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA--EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGD 140 (484)
T ss_pred cC---cceeeeeeccccceeeeeEEEEechhhhcccccccc--cccccchhHHHHhccCHHHhcccccccccccccccCC
Confidence 98 55 999999999999999999999999998764311 11111112245679999998764 1467799
Q ss_pred hHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHH
Q 001974 866 IYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVR 945 (988)
Q Consensus 866 vwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 945 (988)
|||||++++|+++.+.||+........ ...+.. +.....+.+.++.. ...+.++++..
T Consensus 141 iYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~-----~~~~~~~~~rP~i~----------------~~~e~~~~l~~ 198 (484)
T KOG1023|consen 141 IYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILR-----VKKGGSNPFRPSIE----------------LLNELPPELLL 198 (484)
T ss_pred eehHHHHHHHHHhccCccccccccCCh-HHHHHH-----HHhcCCCCcCcchh----------------hhhhcchHHHH
Confidence 999999999999999999864333221 111111 11100111111110 01145557899
Q ss_pred HhhcccCcCCCCCCCHHHHHHHHHHHHH
Q 001974 946 IGVACSVESPQDRMSITNVVHELQSVKN 973 (988)
Q Consensus 946 li~~cl~~dP~~RPs~~evl~~L~~i~~ 973 (988)
++.+||..+|++||++++|-..++.+..
T Consensus 199 l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 199 LVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 9999999999999999999888877654
No 440
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.3e-18 Score=205.10 Aligned_cols=199 Identities=20% Similarity=0.250 Sum_probs=156.4
Q ss_pred HHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcC---CCCceEEEeeccccccc
Q 001974 659 FKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIR---HRNLVKVITSCSSIDFQ 735 (988)
Q Consensus 659 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~ 735 (988)
....+.|.+.+.+|+|+||+||+|.... |+.||+|+-+.. ...+|.--.+++.+++ -+-|..+..+ +.
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~---~~WEfYI~~q~~~RLk~~~~~~~~~~~~a-----~~ 764 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPP---NPWEFYICLQVMERLKPQMLPSIMHISSA-----HV 764 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCC---CceeeeehHHHHHhhchhhhcchHHHHHH-----Hc
Confidence 3455678899999999999999999975 999999986533 2344444455555665 1233333333 22
Q ss_pred CCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC-
Q 001974 736 GNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN- 814 (988)
Q Consensus 736 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~- 814 (988)
..+.-++|+||.+.|+|.+++...+ .+++.-+..++.|++..+++||.. +||||||||+|+|+..
T Consensus 765 ~~~~S~lv~ey~~~Gtlld~~N~~~-----------~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~ 830 (974)
T KOG1166|consen 765 FQNASVLVSEYSPYGTLLDLINTNK-----------VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRRE 830 (974)
T ss_pred cCCcceeeeeccccccHHHhhccCC-----------CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecc
Confidence 3366789999999999999998443 688999999999999999999999 9999999999999942
Q ss_pred ------CCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCC
Q 001974 815 ------DMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKP 882 (988)
Q Consensus 815 ------~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p 882 (988)
..-++|+|||.+....-.... ....+.++|-.+-.+|...+.+++.++|-|.++.+++-|+.|+.-
T Consensus 831 ~~~~~~~~~l~lIDfG~siDm~lfp~~--~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 831 ICADSDSKGLYLIDFGRSIDMKLFPDG--TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cCCCCcccceEEEecccceeeeEcCCC--cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 346899999999755433322 223456789999999999999999999999999999999999754
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=2e-19 Score=199.11 Aligned_cols=268 Identities=22% Similarity=0.293 Sum_probs=128.7
Q ss_pred ccCCcccEEEeccccccCc----ccccccCCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCc
Q 001974 246 SNASKLEFIEALDNSFSGK----LSVNFGGMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPH 321 (988)
Q Consensus 246 ~~l~~L~~L~l~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 321 (988)
..+..|+.|+++++.++.. ++..+...+++++++++++.+..........+..+..+++|+.|++++|.+.+..+.
T Consensus 20 ~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~ 99 (319)
T cd00116 20 PKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCG 99 (319)
T ss_pred HHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHH
Confidence 3333444444444444221 222334445566666665555432222222233445566666666666666544444
Q ss_pred hhhhccc--cccEEEccCCcccc----CCCccccCC-CcceEEEeeCccCCCc----cCcccCCCCccCeEecccccCCC
Q 001974 322 SIANLSD--QLQNLIMTSNQLHG----SIPSGIGNL-VGLYRLGMGGNQFTGT----IPKEMGKLQNLEGMGLYDNQLSG 390 (988)
Q Consensus 322 ~~~~~~~--~L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 390 (988)
.+..+.. .|++|++++|++.+ .+...+..+ ++|+.|++++|.+++. ++..+..+.+|+.|+|++|.+++
T Consensus 100 ~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 179 (319)
T cd00116 100 VLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGD 179 (319)
T ss_pred HHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCch
Confidence 4433321 25555555555542 122233344 5556666666665522 22234444555555555555552
Q ss_pred C----CCCCCCCCCCCCEEEccccccccc----cccccccccccceeecCCCCCCccCchhhhhhcccccceeccccccc
Q 001974 391 E----IPSSLGNLSILSELLLNNNSLSGV----IPSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLV 462 (988)
Q Consensus 391 ~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~ 462 (988)
. ++..+..+++|+.|+|++|.+.+. ++..+..+++|+.|++++|.+++.....+...
T Consensus 180 ~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~--------------- 244 (319)
T cd00116 180 AGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASA--------------- 244 (319)
T ss_pred HHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHH---------------
Confidence 1 122233334555555555555422 12233344455555555555542111111110
Q ss_pred CCCccccccccccceeecCCcccc----cccCcccccCCCCcEEEecCcccccc----CCccccCc-cccCeeecCCCcc
Q 001974 463 GSIPTKIGNLKYLRVFNVSSNNLS----GEIPSQLGLCSYLEEIYMRGNFFHGS----IPSSLSSL-RAVLAIDLSRNNL 533 (988)
Q Consensus 463 ~~~p~~~~~l~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l-~~L~~L~ls~N~l 533 (988)
+ ....+.|+.|++++|.++ ..+...+..+++|+.+++++|.++.. +...+... +.|+.||+.+|.+
T Consensus 245 --~---~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 245 --L---LSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred --H---hccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 0 001256777777777765 22334455566777777777777743 33344444 6777777777753
No 442
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.74 E-value=6e-19 Score=193.76 Aligned_cols=226 Identities=25% Similarity=0.299 Sum_probs=175.7
Q ss_pred eeccccceeEEEEEE---CCCCeEEEEEEeeccccc--hhHHHHHHHHHHHhcC-CCCceEEEeecccccccCCCceEEE
Q 001974 670 LIGMGSFGSVYKGAF---DQDGTIVAIKVFNLQRHG--ASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQGNDFKALV 743 (988)
Q Consensus 670 ~lg~G~~g~Vy~a~~---~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 743 (988)
.+|+|+||.|++++. ...|..+|+|+.+..... .......|..++...+ ||.++++... ++.+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 368999999987644 235677899887643221 1124556777888885 9999998877 5556888999
Q ss_pred EeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeee
Q 001974 744 YEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDF 823 (988)
Q Consensus 744 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 823 (988)
++|..+|++...+.... .++......+...++-|++++|+. +|+|||+|++||+++.+|.+++.||
T Consensus 76 ld~~rgg~lft~l~~~~-----------~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdf 141 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEV-----------MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDF 141 (612)
T ss_pred hhhcccchhhhccccCC-----------chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCc
Confidence 99999999998887654 567777888999999999999999 9999999999999999999999999
Q ss_pred cccccccccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchHHHHHHHHhh
Q 001974 824 GLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLHNYARTALLD 903 (988)
Q Consensus 824 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 903 (988)
|+++..-..... .||..|||||++. ....++|.||||++++||+||..||..
T Consensus 142 glske~v~~~~~--------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------------ 193 (612)
T KOG0603|consen 142 GLSKEAVKEKIA--------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------------ 193 (612)
T ss_pred hhhhHhHhhhhc--------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------------
Confidence 999865433221 4899999999988 567889999999999999999999873
Q ss_pred hhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCH
Q 001974 904 HVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSI 961 (988)
Q Consensus 904 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 961 (988)
....++.......+.+......+++..++..+|..|--.
T Consensus 194 -------------------~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 194 -------------------DTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred -------------------HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 011122222333444566677888888999999988644
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=2.2e-17 Score=166.69 Aligned_cols=140 Identities=17% Similarity=0.265 Sum_probs=107.3
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-----CCCCceEEEeecccccccCCCc
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-----RHRNLVKVITSCSSIDFQGNDF 739 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~~~~~~~~~~~~~~~~ 739 (988)
+...+.||+|+||.||. +..++.. +||++........+.+.+|+.+++.+ .||||++++|++.+. .+.+.
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~--~g~g~ 78 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD--CGTGY 78 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--CCCeE
Confidence 34567999999999995 6556555 69998765555567899999999999 579999999997553 11133
Q ss_pred -eEEEEee--ccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHH-HHHHcCCCCCeEeccCCCCCeeeCC-
Q 001974 740 -KALVYEF--MTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAI-DYLHHHCQEPVLHCDLKPGNVLLDN- 814 (988)
Q Consensus 740 -~~lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlkp~NIll~~- 814 (988)
..+|+|| +++++|.+++... .+++. ..++.|++.++ +|||+. +||||||||+||+++.
T Consensus 79 v~~~I~e~~G~~~~tL~~~l~~~------------~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~ 141 (210)
T PRK10345 79 VYDVIADFDGKPSITLTEFAEQC------------RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRI 141 (210)
T ss_pred EEEEEecCCCCcchhHHHHHHcc------------cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEecc
Confidence 3478999 5579999999653 23333 35677888777 999999 9999999999999974
Q ss_pred ---CCcEEEeeeccc
Q 001974 815 ---DMIAHVGDFGLA 826 (988)
Q Consensus 815 ---~~~~kL~DfG~a 826 (988)
++.++|+||+-+
T Consensus 142 ~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 142 SESEVIPVVCDNIGE 156 (210)
T ss_pred CCCCCcEEEEECCCC
Confidence 348999995444
No 444
>smart00090 RIO RIO-like kinase.
Probab=99.73 E-value=2.5e-17 Score=170.92 Aligned_cols=143 Identities=20% Similarity=0.158 Sum_probs=111.9
Q ss_pred CCCCCCceeccccceeEEEEE-ECCCCeEEEEEEeeccccc------------------------hhHHHHHHHHHHHhc
Q 001974 663 DGFSSTHLIGMGSFGSVYKGA-FDQDGTIVAIKVFNLQRHG------------------------ASKSFLAECKALKNI 717 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~-~~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 717 (988)
..|.+.+.||+|++|.||+|. +..+|+.||+|+++..... ....+..|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347888999999999999998 5568999999998743210 012356899999999
Q ss_pred CC--CCceEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcC
Q 001974 718 RH--RNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHH 795 (988)
Q Consensus 718 ~h--~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~ 795 (988)
.+ ..+.+++++ ...++||||++++++..+..... .....++..++.||+.++++||+.
T Consensus 108 ~~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~~~-----------~~~~~~~~~i~~qi~~~l~~LH~~ 167 (237)
T smart00090 108 YEAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLKDV-----------EPEEEEEFELYDDILEEMRKLYKE 167 (237)
T ss_pred HhcCCCCCeeeEe---------cCceEEEEEecCCcccccccccC-----------CcchHHHHHHHHHHHHHHHHHHhc
Confidence 65 345555543 23479999998888876542221 344556788999999999999999
Q ss_pred CCCC-eEeccCCCCCeeeCCCCcEEEeeecccccc
Q 001974 796 CQEP-VLHCDLKPGNVLLDNDMIAHVGDFGLARVR 829 (988)
Q Consensus 796 ~~~~-ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 829 (988)
+ |+||||||+||+++ ++.++|+|||.|...
T Consensus 168 ---g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 168 ---GELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred ---CCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 9 99999999999999 889999999998743
No 445
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=7.4e-20 Score=202.59 Aligned_cols=154 Identities=23% Similarity=0.262 Sum_probs=86.1
Q ss_pred EEEcCCCCCc-ccccccccCCCCCCEEEcCCCcccc----cCCcccCCCCCCcEEECCCCCCCC------cCCcccccCC
Q 001974 36 VLNLRSKGLS-GSLSPYIGNLSFLREINLMNNSIQG----EIPREFGRLFRLEALFLSDNDLVG------EIPANLSYCS 104 (988)
Q Consensus 36 ~l~l~~~~~~-~~~~~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~n~l~~------~~p~~~~~l~ 104 (988)
.|+|..+.++ ......+..++.|++|+|+++.++. .++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3667777776 3444555666777888888887743 244456666777777777777662 2334455566
Q ss_pred CCceeecCcccccCCCcccccCccc---ccccccccccccC----CCCCcccCC-CccceeeccccccCCC----CCccc
Q 001974 105 RLTILFLGRNKLMGSIPFEFFSLYK---LKQLAMQRNNLTG----GIPPFIGNL-TSLESISLAANAFGGN----IPNSL 172 (988)
Q Consensus 105 ~L~~L~L~~N~i~~~~~~~~~~l~~---L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~L~~N~l~~~----~~~~~ 172 (988)
+|+.|+|++|.+.+..+..|..+.+ |++|++++|++++ .+...+..+ ++|++|++++|.+++. ++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 6777777766665545555554444 6666666666552 112223334 4555555555555421 12233
Q ss_pred cCccccccccccccccc
Q 001974 173 GQLKELKSLGLGANNLS 189 (988)
Q Consensus 173 ~~l~~L~~L~L~~N~l~ 189 (988)
..+++|++|+|++|.++
T Consensus 162 ~~~~~L~~L~l~~n~l~ 178 (319)
T cd00116 162 RANRDLKELNLANNGIG 178 (319)
T ss_pred HhCCCcCEEECcCCCCc
Confidence 34444555555555444
No 446
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=7.7e-18 Score=181.54 Aligned_cols=127 Identities=27% Similarity=0.506 Sum_probs=107.2
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
.+.+|.|++|+..+|.+|+...... ...++.....++.|++.|++| + +.+|||+||.||++..+..
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~--------e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q 394 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTG--------EERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQ 394 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcc--------cccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchh
Confidence 4678999999999999999755432 356778899999999999999 5 9999999999999999999
Q ss_pred EEEeeecccccccccccc--cceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHh
Q 001974 818 AHVGDFGLARVRQEVSNL--TQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVT 878 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt 878 (988)
+||+|||+.......... ........+||..||+||.+.+..|+.++||||+|++++|+++
T Consensus 395 ~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 395 LKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 999999999865544311 1112234579999999999999999999999999999999998
No 447
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=3.2e-16 Score=161.89 Aligned_cols=134 Identities=20% Similarity=0.314 Sum_probs=109.0
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccccc--------hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCce
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG--------ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFK 740 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 740 (988)
+.||+|++|.||+|.+ .|..|++|+....... ....+.+|++++..+.|+++.....++. ..+..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-----DPENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-----eCCCC
Confidence 6799999999999988 6778999986533211 1235778999999999988766555532 23567
Q ss_pred EEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEE
Q 001974 741 ALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHV 820 (988)
Q Consensus 741 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL 820 (988)
++||||++|++|.+++... .+ ++..++.+++.+|.++|+. +++|||++|+||+++ ++.+++
T Consensus 75 ~lv~e~~~G~~L~~~~~~~--------------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~l 135 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSN--------------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYL 135 (211)
T ss_pred EEEEEEeCCcCHHHHHHhc--------------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEE
Confidence 8999999999999887532 12 7788999999999999998 999999999999999 789999
Q ss_pred eeeccccc
Q 001974 821 GDFGLARV 828 (988)
Q Consensus 821 ~DfG~a~~ 828 (988)
+|||.+..
T Consensus 136 iDf~~a~~ 143 (211)
T PRK14879 136 IDFGLAEF 143 (211)
T ss_pred EECCcccC
Confidence 99998863
No 448
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.66 E-value=6.7e-16 Score=157.29 Aligned_cols=140 Identities=24% Similarity=0.200 Sum_probs=109.9
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc----------------------hhHHHHHHHHHHHhcC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG----------------------ASKSFLAECKALKNIR 718 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~ 718 (988)
....|.+.+.||+|+||.||+|... +|+.||||+++..... ....+..|+.++.++.
T Consensus 13 ~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 91 (198)
T cd05144 13 RGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY 91 (198)
T ss_pred cCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH
Confidence 3334888899999999999999885 8999999987643210 1123677889999997
Q ss_pred CC--CceEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCC
Q 001974 719 HR--NLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHC 796 (988)
Q Consensus 719 h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~ 796 (988)
|+ .+.+.++. ...++||||+++++|...... .....++.+++.++.++|+.
T Consensus 92 ~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~-----------------~~~~~~~~~i~~~l~~lh~~- 144 (198)
T cd05144 92 EEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL-----------------EDPEEVLDEILEEIVKAYKH- 144 (198)
T ss_pred HcCCCCCceeec---------CCceEEEEEeCCcchhhcccc-----------------ccHHHHHHHHHHHHHHHHHC-
Confidence 77 45555443 345899999999998765321 23456889999999999998
Q ss_pred CCCeEeccCCCCCeeeCCCCcEEEeeeccccccc
Q 001974 797 QEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQ 830 (988)
Q Consensus 797 ~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 830 (988)
+|+||||||+||++++++.++|+|||.+....
T Consensus 145 --gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 145 --GIIHGDLSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred --CCCcCCCCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999999999996543
No 449
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.66 E-value=8.3e-17 Score=185.40 Aligned_cols=212 Identities=25% Similarity=0.331 Sum_probs=147.1
Q ss_pred hCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.++|+.++.|..|+||.||.++++.+.+.+|+|+=+ +.. ++ +||..+.+ ..+
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~l-----------il-----Rnilt~a~-----------npf 133 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QNL-----------IL-----RNILTFAG-----------NPF 133 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccc-cch-----------hh-----hccccccC-----------Ccc
Confidence 468999999999999999999998888899996522 110 11 12333222 122
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
.| ||=.+.++..+ +++. +++.+++|+|+. +|||||+||+|.+|+.-|++|++
T Consensus 134 vv------gDc~tllk~~g-----------~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlT 185 (1205)
T KOG0606|consen 134 VV------GDCATLLKNIG-----------PLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLT 185 (1205)
T ss_pred ee------chhhhhcccCC-----------CCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeeccccccc
Confidence 33 34344443322 2222 238899999999 99999999999999999999999
Q ss_pred eecccccccccc-----------cccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCC
Q 001974 822 DFGLARVRQEVS-----------NLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGD 890 (988)
Q Consensus 822 DfG~a~~~~~~~-----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~ 890 (988)
|||+++..-... .........+.||+.|+|||++....|+..+|.|++|+++||.+.|+.||...-++
T Consensus 186 DfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe- 264 (1205)
T KOG0606|consen 186 DFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE- 264 (1205)
T ss_pred chhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH-
Confidence 999987532211 01111223467999999999999999999999999999999999999998632111
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCC
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRM 959 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 959 (988)
......+.+. -.| .+.....+++.++++.+.++.+|.+|-
T Consensus 265 ----elfg~visd~-------------i~w------------pE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 265 ----ELFGQVISDD-------------IEW------------PEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ----HHHhhhhhhh-------------ccc------------cccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 1111111111 111 122346788899999999999999994
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.64 E-value=1.3e-15 Score=179.13 Aligned_cols=144 Identities=23% Similarity=0.294 Sum_probs=111.2
Q ss_pred HHHHHHhhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecc--cc------chhHHHHHHHHHHHhcCCCCceEEE
Q 001974 655 YESLFKATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RH------GASKSFLAECKALKNIRHRNLVKVI 726 (988)
Q Consensus 655 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~niv~~~ 726 (988)
+.........|...+.||+|+||+||+|.+. ++.+++|+.... .. ...+.+.+|+++++.++|++++...
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~ 402 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV 402 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence 3333334455677899999999999999884 334444443211 11 1235688999999999999988776
Q ss_pred eecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCC
Q 001974 727 TSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLK 806 (988)
Q Consensus 727 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 806 (988)
.++.. +...++||||+++++|.+++. ....++.++++++.|||+. +++|||+|
T Consensus 403 ~~~~~-----~~~~~lv~E~~~g~~L~~~l~-------------------~~~~~~~~i~~~L~~lH~~---giiHrDlk 455 (535)
T PRK09605 403 IYDVD-----PEEKTIVMEYIGGKDLKDVLE-------------------GNPELVRKVGEIVAKLHKA---GIVHGDLT 455 (535)
T ss_pred EEEEe-----CCCCEEEEEecCCCcHHHHHH-------------------HHHHHHHHHHHHHHHHHhC---CCccCCCC
Confidence 65432 355689999999999998773 2456899999999999998 99999999
Q ss_pred CCCeeeCCCCcEEEeeeccccc
Q 001974 807 PGNVLLDNDMIAHVGDFGLARV 828 (988)
Q Consensus 807 p~NIll~~~~~~kL~DfG~a~~ 828 (988)
|+||++ +++.++|+|||+++.
T Consensus 456 p~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 456 TSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred hHHEEE-ECCcEEEEeCccccc
Confidence 999999 678999999999975
No 451
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.62 E-value=1.7e-15 Score=154.93 Aligned_cols=130 Identities=22% Similarity=0.315 Sum_probs=102.1
Q ss_pred eeccccceeEEEEEECCCCeEEEEEEeeccccc--------hhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceE
Q 001974 670 LIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG--------ASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKA 741 (988)
Q Consensus 670 ~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 741 (988)
.||+|+||.||+|.+ +++.|++|+....... ....+.+|++++..++|+++.....++. ..+..+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCE
Confidence 479999999999996 6788999986432111 1255778999999998876443333321 224568
Q ss_pred EEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 742 LVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 742 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
+||||++|++|.+++.... . .++.+++.+|+++|+. +++|||++|+||+++ ++.++++
T Consensus 74 lv~e~~~g~~l~~~~~~~~-----------~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~li 131 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN-----------D-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLI 131 (199)
T ss_pred EEEEEECCccHHHHHhhcH-----------H-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEE
Confidence 9999999999998874321 1 7899999999999998 999999999999999 8899999
Q ss_pred eeccccc
Q 001974 822 DFGLARV 828 (988)
Q Consensus 822 DfG~a~~ 828 (988)
|||.+..
T Consensus 132 Dfg~a~~ 138 (199)
T TIGR03724 132 DFGLGKY 138 (199)
T ss_pred ECCCCcC
Confidence 9999875
No 452
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.56 E-value=1.6e-16 Score=170.90 Aligned_cols=174 Identities=30% Similarity=0.461 Sum_probs=88.2
Q ss_pred EEccCCccccCCCccccCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEcccccc
Q 001974 333 LIMTSNQLHGSIPSGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSL 412 (988)
Q Consensus 333 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 412 (988)
.+|+.|++. ++|..+..+..|..|.|.+|.|. .+|..++++..|++|||+.|+++ ..|..++.|+ |+.|-+++|++
T Consensus 80 aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl 155 (722)
T KOG0532|consen 80 ADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKL 155 (722)
T ss_pred hhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCcc
Confidence 344444444 44444444445555555555554 45555555555555555555555 4444444444 55555555555
Q ss_pred ccccccccccccccceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcc
Q 001974 413 SGVIPSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQ 492 (988)
Q Consensus 413 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 492 (988)
+ .+|..++.+..|..||.+.|.+. ++|..++++..+ +.|.+..|++. .+|.+++.|+ |..||+|.|+++ .+|-.
T Consensus 156 ~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~sl-r~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv~ 229 (722)
T KOG0532|consen 156 T-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSL-RDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPVD 229 (722)
T ss_pred c-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHH-HHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecchh
Confidence 4 44444555555555555555554 555555555555 45555555554 4444444333 455555555555 45555
Q ss_pred cccCCCCcEEEecCccccccCCccc
Q 001974 493 LGLCSYLEEIYMRGNFFHGSIPSSL 517 (988)
Q Consensus 493 ~~~l~~L~~L~L~~N~l~~~~p~~~ 517 (988)
|..|..|++|-|.+|.|+ ..|..+
T Consensus 230 fr~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 230 FRKMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred hhhhhhheeeeeccCCCC-CChHHH
Confidence 555555555555555555 344443
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.56 E-value=1.8e-14 Score=145.69 Aligned_cols=136 Identities=24% Similarity=0.239 Sum_probs=98.2
Q ss_pred CceeccccceeEEEEEECCCCeEEEEEEeeccccchh--HH----------------------HHHHHHHHHhcCCC--C
Q 001974 668 THLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGAS--KS----------------------FLAECKALKNIRHR--N 721 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~--~~----------------------~~~E~~~l~~l~h~--n 721 (988)
.+.||+|+||+||+|.+. +++.||||+++....... .. ...|...+.++.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 468999999999999986 899999999874322111 11 13455666666433 3
Q ss_pred ceEEEeecccccccCCCceEEEEeeccccchhhh-cCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHc-CCCCC
Q 001974 722 LVKVITSCSSIDFQGNDFKALVYEFMTNGSLENW-LHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHH-HCQEP 799 (988)
Q Consensus 722 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ 799 (988)
+.+.+++ ...++||||++++++... +... ... .++..++.+++.++.++|+ . +
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~------------~~~-~~~~~~~~~~~~~l~~lh~~~---~ 135 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDV------------RLL-EDPEELYDQILELMRKLYREA---G 135 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhh------------hhc-ccHHHHHHHHHHHHHHHhhcc---C
Confidence 4445443 345899999988554211 1100 001 5678899999999999999 7 9
Q ss_pred eEeccCCCCCeeeCCCCcEEEeeeccccccc
Q 001974 800 VLHCDLKPGNVLLDNDMIAHVGDFGLARVRQ 830 (988)
Q Consensus 800 ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 830 (988)
|+||||||+||+++ ++.++++|||.+....
T Consensus 136 ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 136 LVHGDLSEYNILVD-DGKVYIIDVPQAVEID 165 (187)
T ss_pred cCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence 99999999999999 8999999999997543
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.55 E-value=3.2e-14 Score=138.66 Aligned_cols=136 Identities=22% Similarity=0.262 Sum_probs=111.4
Q ss_pred CCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCC--CCceEEEeecccccccCCCceEEEE
Q 001974 667 STHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRH--RNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 667 ~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
+++.+|+|.++.||++... ++.+++|....... ...+.+|+.+++.++| .++.+++++.. ..+..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~-----~~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGE-----SDGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcC-----CCCccEEEE
Confidence 4678999999999999984 47899999864433 4678899999999976 58889888743 336789999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
||++++.+..+ +......++.+++++++++|.....+++|||++|+||+++..+.++++|||
T Consensus 73 e~~~g~~~~~~------------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~ 134 (155)
T cd05120 73 EWIEGETLDEV------------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWE 134 (155)
T ss_pred EecCCeecccC------------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecc
Confidence 99988777643 334566789999999999998644579999999999999998999999999
Q ss_pred ccccc
Q 001974 825 LARVR 829 (988)
Q Consensus 825 ~a~~~ 829 (988)
.++..
T Consensus 135 ~~~~~ 139 (155)
T cd05120 135 YAGYG 139 (155)
T ss_pred cccCC
Confidence 98743
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=1.5e-15 Score=177.01 Aligned_cols=258 Identities=24% Similarity=0.276 Sum_probs=189.8
Q ss_pred hCCCCCCceeccccceeEEEEEECC-CCeEEEEEEeeccc--cchhHHHHHHHHHHHhcC-CCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFDQ-DGTIVAIKVFNLQR--HGASKSFLAECKALKNIR-HRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~ 737 (988)
...|...+.||+|+|+.|-.+.... ....+|+|.+.... ....+....|..+-+.+. |+|++++++. ..+.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCCC
Confidence 4568888899999999998877642 33457777665332 223344556777777775 9999999998 4455
Q ss_pred CceEEEEeeccccchhhhc-CCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHH-cCCCCCeEeccCCCCCeeeCCC
Q 001974 738 DFKALVYEFMTNGSLENWL-HPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLH-HHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l-~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
+..+++++|..++++.+.+ .... ...+...+..+..|+..++.|+| .. ++.|||+||+|.+++..
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~----------~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s 160 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDS----------TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDES 160 (601)
T ss_pred cccccccCcccccccccccccCCc----------cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccC
Confidence 8889999999999999888 3332 13455667789999999999999 77 99999999999999999
Q ss_pred C-cEEEeeecccccccccccccceecccccc-ccccccCcccCCC-CCCCccchHHHHHHHHHHHhCCCCCCccccCCcc
Q 001974 816 M-IAHVGDFGLARVRQEVSNLTQSCSVGVRG-TIGYAAPEYGLGS-EVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLN 892 (988)
Q Consensus 816 ~-~~kL~DfG~a~~~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~ 892 (988)
+ ..+++|||+|..+....... .......| ++.|+|||...+. ...+..|+||.|+++.-+++|..|++.....+..
T Consensus 161 ~~~l~~~df~~At~~~~~~g~~-~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~ 239 (601)
T KOG0590|consen 161 GSALKIADFGLATAYRNKNGAE-RSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR 239 (601)
T ss_pred CCcccCCCchhhccccccCCcc-eeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc
Confidence 9 99999999998765522211 12233457 9999999998884 4567899999999999999999999876555433
Q ss_pred hHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
+..|...... .... ..........++..+++..+|..|.+.+++..
T Consensus 240 ~~~~~~~~~~------------~~~~----------------~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 240 YSSWKSNKGR------------FTQL----------------PWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ceeecccccc------------cccC----------------ccccCChhhhhcccccccCCchhccccccccc
Confidence 3333222100 0000 01133445678999999999999999888754
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=1.2e-13 Score=143.79 Aligned_cols=139 Identities=18% Similarity=0.160 Sum_probs=104.7
Q ss_pred Cceec-cccceeEEEEEECCCCeEEEEEEeeccc-------------cchhHHHHHHHHHHHhcCCCCc--eEEEeeccc
Q 001974 668 THLIG-MGSFGSVYKGAFDQDGTIVAIKVFNLQR-------------HGASKSFLAECKALKNIRHRNL--VKVITSCSS 731 (988)
Q Consensus 668 ~~~lg-~G~~g~Vy~a~~~~~~~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~h~ni--v~~~~~~~~ 731 (988)
...|| .||.|+||.+.. .+..+|||.+.... ......+.+|++++.+++|+++ ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 35687 899999999988 47789999885311 1223567889999999988774 667766432
Q ss_pred ccccCCCceEEEEeeccc-cchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCe
Q 001974 732 IDFQGNDFKALVYEFMTN-GSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNV 810 (988)
Q Consensus 732 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NI 810 (988)
. .......++||||+++ .+|.+++... +++.. .+.+|+.++.+||+. ||+||||||+||
T Consensus 114 ~-~~~~~~~~lV~e~l~G~~~L~~~l~~~------------~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NI 173 (239)
T PRK01723 114 R-HGLFYRADILIERIEGARDLVALLQEA------------PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNI 173 (239)
T ss_pred e-cCcceeeeEEEEecCCCCCHHHHHhcC------------CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhE
Confidence 1 1111233599999987 6999887542 23332 356899999999999 999999999999
Q ss_pred eeCCCCcEEEeeeccccc
Q 001974 811 LLDNDMIAHVGDFGLARV 828 (988)
Q Consensus 811 ll~~~~~~kL~DfG~a~~ 828 (988)
|++.++.++|+|||.+..
T Consensus 174 Lv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 174 LLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred EEcCCCCEEEEECCCccc
Confidence 999999999999998875
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.51 E-value=6.6e-16 Score=166.26 Aligned_cols=197 Identities=29% Similarity=0.432 Sum_probs=174.8
Q ss_pred cCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEccccccccccccccccccccce
Q 001974 349 GNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIPSCLGSLKQLAI 428 (988)
Q Consensus 349 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 428 (988)
..+..-...||+.|++. ++|..++.+..|+.+.|+.|.+. .+|..++++..|+.|||+.|+++ ..|..++.|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 34555678899999999 89999999999999999999999 89999999999999999999999 7899999988 999
Q ss_pred eecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccCCCCcEEEecCcc
Q 001974 429 LHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMRGNF 508 (988)
Q Consensus 429 L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 508 (988)
|-+++|+++ .+|+.++.+..+ ..||.+.|.+. .+|..++.+.+|+.|.+..|++. .+|++++ .-.|..||+|.|+
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl-~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNk 222 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTL-AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNK 222 (722)
T ss_pred EEEecCccc-cCCcccccchhH-HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCc
Confidence 999999998 999999977777 88999999998 88999999999999999999999 7898888 4569999999999
Q ss_pred ccccCCccccCccccCeeecCCCcccCcCcccccCC---CCcEEeCCCCc
Q 001974 509 FHGSIPSSLSSLRAVLAIDLSRNNLSGLIPKFLEDL---SLEYLNLSFND 555 (988)
Q Consensus 509 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~---~L~~l~l~~N~ 555 (988)
++ .+|-.|.+|++|++|-|.+|.|...+..++..= =.++|+...+.
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLqSPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQSPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCCCChHHHHhccceeeeeeecchhcc
Confidence 99 899999999999999999999987555442221 26777777664
No 458
>PLN03150 hypothetical protein; Provisional
Probab=99.50 E-value=3.6e-14 Score=168.41 Aligned_cols=117 Identities=31% Similarity=0.481 Sum_probs=85.1
Q ss_pred ccceeecCCcccccccCcccccCCCCcEEEecCccccccCCccccCccccCeeecCCCcccCcCccc-ccCCCCcEEeCC
Q 001974 474 YLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGLIPKF-LEDLSLEYLNLS 552 (988)
Q Consensus 474 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~L~~l~l~ 552 (988)
.++.|+|++|.++|.+|..++.+++|+.|+|++|.|.|.+|..++.+++|+.|||++|+++|.+|.. ..+.+|++|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 3667777777777777777777777777777777777777777777777777788887777777765 666677888888
Q ss_pred CCcCcccCCCC--cccCcccccccccccccCCCCCCCCCCccc
Q 001974 553 FNDLEGEVPTK--GVFANISRISVAGFNRLCGGIPELQLPKCT 593 (988)
Q Consensus 553 ~N~l~~~~p~~--~~~~~~~~~~~~~n~~lcg~~~~~~~~~~~ 593 (988)
+|+++|.+|.. .....+..+.+.+|+.+||.+.. +.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~l---~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPGL---RACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCCC---CCCc
Confidence 88887777764 11223445678889999986542 4564
No 459
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=4.4e-14 Score=142.51 Aligned_cols=164 Identities=22% Similarity=0.369 Sum_probs=123.5
Q ss_pred HHHHHhcCCCCceEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHH
Q 001974 711 CKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAID 790 (988)
Q Consensus 711 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~ 790 (988)
..-+-.+.|.|++++..|+.+..+.+.....+++|||..|++..++++....+ ..+......+|+-||..||.
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~-------~a~~~~~wkkw~tqIlsal~ 190 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ-------KALFQKAWKKWCTQILSALS 190 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh-------hhhhHHHHHHHHHHHHhhhh
Confidence 33445567999999999987776666777889999999999999998765433 35777888999999999999
Q ss_pred HHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccccceeccccccccccccCcccCCCCCCCccchHHHH
Q 001974 791 YLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYG 870 (988)
Q Consensus 791 ~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG 870 (988)
|||+. .++|+|+++.-+-|++..+|-+|++--.-...................+-++|.|||+-.....+.++|||+||
T Consensus 191 yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fg 269 (458)
T KOG1266|consen 191 YLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFG 269 (458)
T ss_pred hhhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhh
Confidence 99994 78999999999999999999988853211111000000011111122467899999987777778899999999
Q ss_pred HHHHHHHhCCCC
Q 001974 871 ILLLEMVTGKKP 882 (988)
Q Consensus 871 ~vl~elltg~~p 882 (988)
+...||..+..-
T Consensus 270 mcAlemailEiq 281 (458)
T KOG1266|consen 270 MCALEMAILEIQ 281 (458)
T ss_pred HHHHHHHHheec
Confidence 999999887654
No 460
>PLN03150 hypothetical protein; Provisional
Probab=99.46 E-value=1.3e-13 Score=163.70 Aligned_cols=130 Identities=32% Similarity=0.492 Sum_probs=108.3
Q ss_pred CCCCCCCCC----ceeeeeEEeCCC----CcEEEEEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccCCCCCC
Q 001974 11 NSWNDSGHF----CEWKGITCGLRH----RRVTVLNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLFRL 82 (988)
Q Consensus 11 ~~w~~~~~~----c~~~~v~c~~~~----~~v~~l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 82 (988)
.+|.++ .| |.|.||.|.... ..|+.|+|++|++++.+|+.++.+++|+.|+|++|+|++.+|..++.+++|
T Consensus 390 ~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L 468 (623)
T PLN03150 390 FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSL 468 (623)
T ss_pred CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCC
Confidence 489643 23 279999996422 258899999999999999999999999999999999999999999999999
Q ss_pred cEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccccCc-cccccccccccccc
Q 001974 83 EALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSL-YKLKQLAMQRNNLT 141 (988)
Q Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l-~~L~~L~L~~N~l~ 141 (988)
+.|+|++|++++.+|..++.+++|++|+|++|++++.+|..+..+ .++..+++.+|...
T Consensus 469 ~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 469 EVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccc
Confidence 999999999999999999999999999999999998888887753 45666777777543
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=8e-14 Score=158.77 Aligned_cols=202 Identities=35% Similarity=0.483 Sum_probs=149.7
Q ss_pred EEEccCCccccCCCccccCCCcceEEEeeCccCCCccCcccCCCC-ccCeEecccccCCCCCCCCCCCCCCCCEEEcccc
Q 001974 332 NLIMTSNQLHGSIPSGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQ-NLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNN 410 (988)
Q Consensus 332 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 410 (988)
.+.++.|.+. .....+..++.++.|++.+|+++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4555555553 23334555577888888888887 6666666664 8888888888887 66667788888888888888
Q ss_pred ccccccccccccccccceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccC
Q 001974 411 SLSGVIPSCLGSLKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIP 490 (988)
Q Consensus 411 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 490 (988)
+++ .+|...+..++|+.|++++|++. .+|........+ ++|.+++|.+. ..+..+..+.++..|.+++|++. .++
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L-~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSAL-EELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhh-hhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 888 55655657788888888888887 788776555556 77888888644 56777788888888888888887 557
Q ss_pred cccccCCCCcEEEecCccccccCCccccCccccCeeecCCCcccCcCcccccC
Q 001974 491 SQLGLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGLIPKFLED 543 (988)
Q Consensus 491 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 543 (988)
..++.+.++++|++++|.++ .++. ++.+..|+.||+++|.++..+|.....
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~ 299 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIALL 299 (394)
T ss_pred chhccccccceecccccccc-cccc-ccccCccCEEeccCccccccchhhhcc
Confidence 77788888888888888888 4444 788888888888888888877765433
No 462
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.43 E-value=1.6e-13 Score=156.20 Aligned_cols=200 Identities=30% Similarity=0.425 Sum_probs=177.2
Q ss_pred eEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCC-CCCEEEccccccccccccccccccccceeecCC
Q 001974 355 YRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLS-ILSELLLNNNSLSGVIPSCLGSLKQLAILHLFE 433 (988)
Q Consensus 355 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~ 433 (988)
..|+++.|.+. .....+..++.++.|++.+|+++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++
T Consensus 96 ~~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 96 PSLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred ceeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 36899999986 34555677789999999999999 7788778775 9999999999999 6777899999999999999
Q ss_pred CCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccCCCCcEEEecCccccccC
Q 001974 434 NGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMRGNFFHGSI 513 (988)
Q Consensus 434 N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 513 (988)
|+++ .+|.....++.+ +.|++++|+++ .+|..+..+..|+.|++++|.+. ..+..+..+.++..|.+++|++. .+
T Consensus 173 N~l~-~l~~~~~~~~~L-~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~ 247 (394)
T COG4886 173 NDLS-DLPKLLSNLSNL-NNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DL 247 (394)
T ss_pred chhh-hhhhhhhhhhhh-hheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ec
Confidence 9998 899888788888 89999999998 88887777788999999999766 68888999999999999999998 56
Q ss_pred CccccCccccCeeecCCCcccCcCcccccCCCCcEEeCCCCcCcccCCCC
Q 001974 514 PSSLSSLRAVLAIDLSRNNLSGLIPKFLEDLSLEYLNLSFNDLEGEVPTK 563 (988)
Q Consensus 514 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~l~l~~N~l~~~~p~~ 563 (988)
+..++.+..++.|++++|+++...+ .....+|++|++++|.+...+|..
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred cchhccccccceecccccccccccc-ccccCccCEEeccCccccccchhh
Confidence 8899999999999999999998877 777789999999999999888864
No 463
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.35 E-value=1.7e-11 Score=136.66 Aligned_cols=172 Identities=20% Similarity=0.247 Sum_probs=131.2
Q ss_pred EEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeeccccchhhhcCCCC
Q 001974 681 KGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDA 760 (988)
Q Consensus 681 ~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 760 (988)
.|..+.++.+|.|.+++....+......+-++.++.++||+|+++++. ++..+..|+|+|.+. .|..++.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk--- 99 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLK--- 99 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHH---
Confidence 456667899999999876655455667888999999999999999998 445578999999983 5666663
Q ss_pred CCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccccceec
Q 001974 761 VPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNLTQSCS 840 (988)
Q Consensus 761 ~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~ 840 (988)
.++...+...+.||+.||.|||+.| +++|++|.-+.|+|++.|..||++|.++........ ..
T Consensus 100 -----------~l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~----~~ 162 (690)
T KOG1243|consen 100 -----------ELGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA----PA 162 (690)
T ss_pred -----------HhHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc----cc
Confidence 3445677788999999999999764 999999999999999999999999998865433221 00
Q ss_pred cccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCC
Q 001974 841 VGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKK 881 (988)
Q Consensus 841 ~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~ 881 (988)
....--..|..|+.+.... -..|.|.||+++||++.|..
T Consensus 163 ~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 163 KSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred ccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 1111233466676544333 34699999999999999943
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.33 E-value=1.1e-12 Score=145.26 Aligned_cols=251 Identities=24% Similarity=0.260 Sum_probs=181.2
Q ss_pred CCCCCceecc--ccceeEEEEEE--CCCCeEEEEEEeecc--ccchhHHHHHHHHHHHhc-CCCCceEEEeecccccccC
Q 001974 664 GFSSTHLIGM--GSFGSVYKGAF--DQDGTIVAIKVFNLQ--RHGASKSFLAECKALKNI-RHRNLVKVITSCSSIDFQG 736 (988)
Q Consensus 664 ~y~~~~~lg~--G~~g~Vy~a~~--~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~ 736 (988)
.|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.. .......-.+|+...+++ .|++.++.+.. +.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 4667788999 99999999998 778899999985422 223334455677777777 68999986555 566
Q ss_pred CCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHH----HHHHHHcCCCCCeEeccCCCCCeee
Q 001974 737 NDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVAS----AIDYLHHHCQEPVLHCDLKPGNVLL 812 (988)
Q Consensus 737 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlkp~NIll 812 (988)
.+..++-+|++ +.++.++.+.... -++...++.+..+..+ |+.++|+. +++|-|+||.||+.
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~~----------~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~ 255 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPCN----------FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFT 255 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcccc----------cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheec
Confidence 78899999999 7899888876542 3666777888888888 99999998 99999999999999
Q ss_pred CCC-CcEEEeeeccccccccccccc-ceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCC
Q 001974 813 DND-MIAHVGDFGLARVRQEVSNLT-QSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGD 890 (988)
Q Consensus 813 ~~~-~~~kL~DfG~a~~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~ 890 (988)
..+ ..++++|||+........... ........|...|++||...+ .++.++|+|++|.+..+..++..+........
T Consensus 256 ~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~ 334 (524)
T KOG0601|consen 256 TSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS 334 (524)
T ss_pred ccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC
Confidence 999 889999999998776654222 222223357889999998654 67889999999999999999877644221110
Q ss_pred cchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHH
Q 001974 891 LNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVH 966 (988)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 966 (988)
|.. ++..+.. .+.......++...+..|++.+|..|++++.+.+
T Consensus 335 -----W~~----------~r~~~ip-----------------~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 335 -----WSQ----------LRQGYIP-----------------LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -----ccc----------cccccCc-----------------hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 100 0000000 0011122344556888999999999999877654
No 465
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.33 E-value=5.9e-12 Score=142.75 Aligned_cols=143 Identities=21% Similarity=0.250 Sum_probs=99.7
Q ss_pred CceeccccceeEEEEEECCCCeEEEEEEeeccccchh----------------------------------------HHH
Q 001974 668 THLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGAS----------------------------------------KSF 707 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~ 707 (988)
.+.||.|++|.||+|+.. +|+.||||+.++...... -++
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 368999999999999986 899999999864321100 024
Q ss_pred HHHHHHHHhc----CCCCceEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHH
Q 001974 708 LAECKALKNI----RHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAI 783 (988)
Q Consensus 708 ~~E~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~ 783 (988)
.+|++.+.++ +|.+-+.+-.++.+ .....++||||++|++|.++...... .. ....++.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~vLvmE~i~G~~L~~~~~~~~~----------~~---~~~~ia~ 263 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWD----RTSERVLTMEWIDGIPLSDIAALDEA----------GL---DRKALAE 263 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehh----hcCCceEEEEeECCcccccHHHHHhc----------CC---CHHHHHH
Confidence 4555555555 23333333333221 12456899999999999887642210 11 2345666
Q ss_pred HHHH-HHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccc
Q 001974 784 DVAS-AIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQE 831 (988)
Q Consensus 784 ~i~~-~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 831 (988)
+++. .+..+|.. |++|+|++|.||+++++++++++|||++...+.
T Consensus 264 ~~~~~~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 264 NLARSFLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 6666 46788988 999999999999999999999999999976543
No 466
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.27 E-value=1.1e-12 Score=130.43 Aligned_cols=209 Identities=21% Similarity=0.209 Sum_probs=145.9
Q ss_pred CCccccCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEcc-cccccccccccccc
Q 001974 344 IPSGIGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLN-NNSLSGVIPSCLGS 422 (988)
Q Consensus 344 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~-~N~l~~~~p~~~~~ 422 (988)
+|-.+..+.+|+.+.+|++.-. .+-+....-+.|+.+...+.-++ ..|. +-....+..+.-+ .--..|..-..+..
T Consensus 206 l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~-~~~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dT 282 (490)
T KOG1259|consen 206 LSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQ-DVPS-LLPETILADPSGSEPSTSNGSALVSADT 282 (490)
T ss_pred cccchHHhhhhheeeeeccchh-heeceeecCchhheeeeeccccc-cccc-ccchhhhcCccCCCCCccCCceEEecch
Confidence 3444455566777777776544 22222223356777777666655 2222 2122222222111 11233444455666
Q ss_pred ccccceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcccccCCCCcEE
Q 001974 423 LKQLAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQLGLCSYLEEI 502 (988)
Q Consensus 423 l~~L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 502 (988)
++.|++||||+|.|+ .+.+++.-++.+ +.|++|+|.+. .+.. +..|++|+.||||+|.++ .+..+-..+-+.+.|
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pki-r~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKL-RRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccce-eEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 788999999999998 888888888888 89999999997 4333 888999999999999999 777777788899999
Q ss_pred EecCccccccCCccccCccccCeeecCCCcccCcCc--ccccCCCCcEEeCCCCcCcccCCC
Q 001974 503 YMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGLIP--KFLEDLSLEYLNLSFNDLEGEVPT 562 (988)
Q Consensus 503 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p--~~~~~~~L~~l~l~~N~l~~~~p~ 562 (988)
.|++|.+.. -..++.|-+|..||+++|+|..... .++.++-|+.+.|.+|.+.+.+.-
T Consensus 358 ~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 358 KLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred ehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 999998873 2457778889999999999986543 357888899999999999876653
No 467
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=8.9e-11 Score=116.14 Aligned_cols=137 Identities=23% Similarity=0.164 Sum_probs=99.6
Q ss_pred ceeccccceeEEEEEECC------CCeEEEEEEeeccc----------------------cchhHHH----HHHHHHHHh
Q 001974 669 HLIGMGSFGSVYKGAFDQ------DGTIVAIKVFNLQR----------------------HGASKSF----LAECKALKN 716 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~------~~~~vavK~~~~~~----------------------~~~~~~~----~~E~~~l~~ 716 (988)
..||.|.-+.||.|.... .+..+|||+++... ....+.+ .+|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 578999999999998643 35799999985211 0111223 379999999
Q ss_pred cC--CCCceEEEeecccccccCCCceEEEEeeccccchhh-hcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHH-
Q 001974 717 IR--HRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLEN-WLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYL- 792 (988)
Q Consensus 717 l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~L- 792 (988)
+. .-++.+++++ ..-++||||+.+..+.. .++. ..++..+...+..+++.+|.+|
T Consensus 83 l~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd------------~~~~~~~~~~i~~~i~~~l~~l~ 141 (197)
T cd05146 83 MQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKD------------AKLNDEEMKNAYYQVLSMMKQLY 141 (197)
T ss_pred HHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhc------------cccCHHHHHHHHHHHHHHHHHHH
Confidence 84 3577777765 45689999996543321 1111 1244456677889999999999
Q ss_pred HcCCCCCeEeccCCCCCeeeCCCCcEEEeeeccccccc
Q 001974 793 HHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQ 830 (988)
Q Consensus 793 H~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 830 (988)
|+. ++||||+++.||+++ ++.+.|+|||.|...+
T Consensus 142 H~~---glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 142 KEC---NLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HhC---CeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence 787 999999999999997 4689999999887554
No 468
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.21 E-value=5.5e-11 Score=135.95 Aligned_cols=147 Identities=18% Similarity=0.212 Sum_probs=96.8
Q ss_pred CCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccc----------------------------------hhH---
Q 001974 663 DGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG----------------------------------ASK--- 705 (988)
Q Consensus 663 ~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~----------------------------------~~~--- 705 (988)
..|+. +.||+|++|.||+|+.+.+|+.||||+.++.... ..+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 44666 7999999999999999866999999999743210 001
Q ss_pred ---HHHHHHHHHHhcC----CCCceEEEeecccccccCCCceEEEEeeccccchhhhc--CCCCCCCchhhhHhhcCCHH
Q 001974 706 ---SFLAECKALKNIR----HRNLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWL--HPDAVPQKDVEIEIQKLTLL 776 (988)
Q Consensus 706 ---~~~~E~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~~~~~~~l~~~ 776 (988)
++.+|+.-+.+++ +...+.+-.++. +.....++||||++|+++.++- ...+. ....+...
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~----d~st~~VLvmE~i~G~~l~d~~~l~~~g~-------d~~~la~~ 267 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYW----DYCSETVMVMERMYGIPVSDVAALRAAGT-------DMKLLAER 267 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeec----ccCCCceEEEeeecCccHHhHHHHHhcCC-------CHHHHHHH
Confidence 2344554444442 333333322221 1125578999999999998752 21110 01133344
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC----cEEEeeecccccccc
Q 001974 777 QRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM----IAHVGDFGLARVRQE 831 (988)
Q Consensus 777 ~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~DfG~a~~~~~ 831 (988)
.+..++.|+. .. |++|+|+||.||+++.++ ++++.|||++...+.
T Consensus 268 ~v~~~~~Qif-------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 268 GVEVFFTQVF-------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHHHHH-------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4444555544 35 999999999999999888 999999999987654
No 469
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.20 E-value=5.7e-11 Score=117.96 Aligned_cols=131 Identities=18% Similarity=0.088 Sum_probs=96.4
Q ss_pred CceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCC-ceEEEeecccccccCCCceEEEEee
Q 001974 668 THLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRN-LVKVITSCSSIDFQGNDFKALVYEF 746 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~~lv~e~ 746 (988)
++.++.|.++.||+++. .++.|++|+...... ....+..|+.+++.+.+.. +.+++++. ....++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-------~~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-------PETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-------CCCCeEEEEe
Confidence 46789999999999987 478899999754322 2245678999999885544 34555542 1235799999
Q ss_pred ccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCC--CCCeEeccCCCCCeeeCCCCcEEEeeec
Q 001974 747 MTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHC--QEPVLHCDLKPGNVLLDNDMIAHVGDFG 824 (988)
Q Consensus 747 ~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlkp~NIll~~~~~~kL~DfG 824 (988)
++|.++.+.- . ....++.+++++++.||+.. ..+++|||++|.||+++ ++.++++|||
T Consensus 73 i~G~~l~~~~--~-----------------~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~ 132 (170)
T cd05151 73 IEGSELLTED--F-----------------SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWE 132 (170)
T ss_pred cCCCcccccc--c-----------------cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecc
Confidence 9998876430 0 01235678999999999982 12359999999999999 6789999999
Q ss_pred cccc
Q 001974 825 LARV 828 (988)
Q Consensus 825 ~a~~ 828 (988)
.+..
T Consensus 133 ~a~~ 136 (170)
T cd05151 133 YAGM 136 (170)
T ss_pred cccC
Confidence 8863
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.16 E-value=5.4e-12 Score=143.68 Aligned_cols=269 Identities=26% Similarity=0.256 Sum_probs=175.3
Q ss_pred cEEEEEcCCCCCcccccccccCCCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecC
Q 001974 33 RVTVLNLRSKGLSGSLSPYIGNLSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLG 112 (988)
Q Consensus 33 ~v~~l~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 112 (988)
....++..++.+....-. ...+..+..+.++.|.|+ .+-..+..+.+|+.|++.+|+|+ .+...+..+.+|++|+|+
T Consensus 50 ~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls 126 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLS 126 (414)
T ss_pred hhhhhcchhccccchhhh-HHHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchh-hcccchhhhhcchheecc
Confidence 334444444443322222 245677778888899888 34455788899999999999998 555557888999999999
Q ss_pred cccccCCCcccccCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCC-ccccCcccccccccccccccCc
Q 001974 113 RNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIP-NSLGQLKELKSLGLGANNLSGI 191 (988)
Q Consensus 113 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~ 191 (988)
+|+|+.+. .+..++.|+.|++++|.|+. ...+..++.|+.+++++|++....+ . ...+.+|+.+++.+|.+..+
T Consensus 127 ~N~I~~i~--~l~~l~~L~~L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i 201 (414)
T KOG0531|consen 127 FNKITKLE--GLSTLTLLKELNLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI 201 (414)
T ss_pred cccccccc--chhhccchhhheeccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc
Confidence 99987443 35566669999999999883 2456678899999999999884433 2 57788899999999998733
Q ss_pred cchhhccccCccEEEeccCCCCCCCCCcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCcccccccC
Q 001974 192 IPPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGKLSVNFGG 271 (988)
Q Consensus 192 ~~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~~~~~~~~ 271 (988)
..+..+..+..+++..|.+. .+.........+|+.+++++|.+.. .+..+..+..+..|++.+|++..... +..
T Consensus 202 --~~~~~~~~l~~~~l~~n~i~-~~~~l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~~~--~~~ 275 (414)
T KOG0531|consen 202 --EGLDLLKKLVLLSLLDNKIS-KLEGLNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNLEG--LER 275 (414)
T ss_pred --cchHHHHHHHHhhcccccce-eccCcccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccccc--ccc
Confidence 34455556666688888887 3222111111137888888888873 33566677788888888888765332 344
Q ss_pred CccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCC
Q 001974 272 MKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRG 317 (988)
Q Consensus 272 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~ 317 (988)
...+..+....|.+........ ..-......++...+..|.+..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 276 LPKLSELWLNDNKLALSEAISQ--EYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred cchHHHhccCcchhcchhhhhc--cccccccccccccccccCcccc
Confidence 5556666666666653221100 0012344555555555555553
No 471
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.15 E-value=6e-12 Score=132.35 Aligned_cols=209 Identities=20% Similarity=0.179 Sum_probs=146.4
Q ss_pred CCCCCCcEEECCCCCCCCcCC--cccccCCCCceeecCcccccCCCc--ccccCcccccccccccccccCCCCC-cccCC
Q 001974 77 GRLFRLEALFLSDNDLVGEIP--ANLSYCSRLTILFLGRNKLMGSIP--FEFFSLYKLKQLAMQRNNLTGGIPP-FIGNL 151 (988)
Q Consensus 77 ~~l~~L~~L~Ls~n~l~~~~p--~~~~~l~~L~~L~L~~N~i~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l 151 (988)
.++.+|+...|.+..+. ..+ .....|++++.||||+|-+....+ .-...|++|+.|+|+.|++..-... .-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 45788999999999887 444 366789999999999998863222 2334789999999999998732222 22367
Q ss_pred CccceeeccccccCCC-CCccccCcccccccccccccccCccchhhccccCccEEEeccCCCCCCCC-CcccccCCCCcc
Q 001974 152 TSLESISLAANAFGGN-IPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLLANFSVPRNQFHGSLP-PSLGLTLPHLRL 229 (988)
Q Consensus 152 ~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~i~~~lp-~~~~~~l~~L~~ 229 (988)
+.|+.|.|+.|.++.. +......+|+|+.|+|..|....+......-++.|++|||++|++. ..+ ...-..++.|..
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~~ 275 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLNQ 275 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchhh
Confidence 8999999999999743 2233557899999999999654466677778899999999999998 444 333457888999
Q ss_pred eecccccccccc-Ccc-----cccCCcccEEEeccccccCccc-ccccCCccccEEecccccCCC
Q 001974 230 FQVHHNFFSGSI-PIS-----LSNASKLEFIEALDNSFSGKLS-VNFGGMKNLSYFNVAYNNLGS 287 (988)
Q Consensus 230 L~L~~N~l~~~~-p~~-----l~~l~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~ 287 (988)
|+++.+.+..+- |+. ...+++|++|++..|+|..... ..+..+++|+.|.+..|.++.
T Consensus 276 Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 276 LNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 999998887542 332 3455667777777776643211 123334555555555555543
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.14 E-value=5e-12 Score=125.90 Aligned_cols=129 Identities=26% Similarity=0.287 Sum_probs=79.4
Q ss_pred CCCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccccCcccccccc
Q 001974 55 LSFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSLYKLKQLA 134 (988)
Q Consensus 55 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 134 (988)
...|++||||+|.|+ .+.++..-++.++.|++|+|.|. .+.. ++.|++|+.||||+|.++ .+.++-..|.+.++|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 345666777777776 56666666667777777777766 3332 666667777777777666 5555555666666666
Q ss_pred cccccccCCCCCcccCCCccceeeccccccCCC-CCccccCccccccccccccccc
Q 001974 135 MQRNNLTGGIPPFIGNLTSLESISLAANAFGGN-IPNSLGQLKELKSLGLGANNLS 189 (988)
Q Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~ 189 (988)
|+.|.|.. -..+..|.+|..||+++|+|... .-..+++|+-|++|.|.+|.|.
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 66666652 13355666666666666666522 1234566666666666666665
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.13 E-value=1.6e-11 Score=119.01 Aligned_cols=125 Identities=30% Similarity=0.366 Sum_probs=40.3
Q ss_pred ccCCCCCCEEEcCCCcccccCCcccC-CCCCCcEEECCCCCCCCcCCcccccCCCCceeecCcccccCCCcccc-cCccc
Q 001974 52 IGNLSFLREINLMNNSIQGEIPREFG-RLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKLMGSIPFEF-FSLYK 129 (988)
Q Consensus 52 l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~-~~l~~ 129 (988)
+-+...+++|+|++|+|+. + +.++ .+.+|+.|+|++|.|+ .++ .+..+++|++|+|++|+|+. +...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 3444567888888888874 3 2354 5778888888888888 443 47777888888888888874 33334 35777
Q ss_pred ccccccccccccCCC-CCcccCCCccceeeccccccCCCCCc----cccCcccccccc
Q 001974 130 LKQLAMQRNNLTGGI-PPFIGNLTSLESISLAANAFGGNIPN----SLGQLKELKSLG 182 (988)
Q Consensus 130 L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~ 182 (988)
|++|+|++|+|.... -..+..+++|++|+|.+|.+... +. .+..+|+|+.||
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEET
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeC
Confidence 888888888876321 13455666777777777766522 21 233455555554
No 474
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=2.8e-11 Score=134.22 Aligned_cols=248 Identities=20% Similarity=0.170 Sum_probs=173.9
Q ss_pred hCCCCCCceeccccceeEEEEEEC-CCCeEEEEEEeeccccchhH--HHHHHHHHHHhc-CCCCceEEEeecccccccCC
Q 001974 662 TDGFSSTHLIGMGSFGSVYKGAFD-QDGTIVAIKVFNLQRHGASK--SFLAECKALKNI-RHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 662 ~~~y~~~~~lg~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 737 (988)
..+|..+..||.|.|+.|+..... .++..|++|........... .-..|+.+...+ .|.+++.++..+. ..
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-----~~ 338 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-----QL 338 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-----cc
Confidence 457889999999999999998765 67788999987543332222 234566666666 6888888776633 33
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC-C
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND-M 816 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~-~ 816 (988)
...++--||+++++......-. +.+++..++++..|++.++.++|+. .++|+|+||+||++..+ +
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~-----------~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~ 404 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTS-----------QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGF 404 (524)
T ss_pred ccccCchhhhcCcchhhhhHHH-----------HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchh
Confidence 5667889999999887666211 4678888999999999999999998 99999999999999886 7
Q ss_pred cEEEeeecccccccccccccceeccccccccccc--cCcccCCCCCCCccchHHHHHHHHHHHhCCCCCCccccCCcchH
Q 001974 817 IAHVGDFGLARVRQEVSNLTQSCSVGVRGTIGYA--APEYGLGSEVSTNGDIYSYGILLLEMVTGKKPTDVMFEGDLNLH 894 (988)
Q Consensus 817 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDvwslG~vl~elltg~~p~~~~~~~~~~~~ 894 (988)
..+++|||.+......... ..+.-+++ +|+......+..++|+||||..+.|..+|..--....
T Consensus 405 ~~~~~~~~~~t~~~~~~~~-------~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~------- 470 (524)
T KOG0601|consen 405 FSKLGDFGCWTRLAFSSGV-------FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV------- 470 (524)
T ss_pred hhhccccccccccceeccc-------ccccccccccchhhccccccccccccccccccccccccCcccCcccc-------
Confidence 8899999998642221111 11233344 5556666788899999999999999999876421100
Q ss_pred HHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcCCCCCCCHHHHHHHHHHH
Q 001974 895 NYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVESPQDRMSITNVVHELQSV 971 (988)
Q Consensus 895 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 971 (988)
.| .. ++.............+..+.+.+...++..||.+.++.....-+
T Consensus 471 ~~---------~~--------------------i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 471 QS---------LT--------------------IRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred cc---------ee--------------------eecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 00 00 00011111122335577888889999999999998887665444
No 475
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.12 E-value=2.2e-09 Score=112.79 Aligned_cols=280 Identities=14% Similarity=0.107 Sum_probs=174.0
Q ss_pred CCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhc-CCCCceEEEeeccccc--ccCCCceEE
Q 001974 666 SSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNI-RHRNLVKVITSCSSID--FQGNDFKAL 742 (988)
Q Consensus 666 ~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~--~~~~~~~~l 742 (988)
...+.||+|+.+.+|-.-. -+..+.|++......... +.+..|.+. .||-+-.-+.+-.... ........+
T Consensus 14 ~~gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecch---hhchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 4567899999999996432 223456888644332222 233444444 5665443122211000 112233667
Q ss_pred EEeecccc-chhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEe
Q 001974 743 VYEFMTNG-SLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVG 821 (988)
Q Consensus 743 v~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 821 (988)
.|+.+++. ....+.......+ ......|...++.++.+|.+.+.||+. |.+-||+.++|+|+++++.+.|.
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRq-----s~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LV 159 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQ-----SYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLV 159 (637)
T ss_pred ecccCCCccchhhhcCchhhcc-----cCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEE
Confidence 88887653 3444443322111 113578999999999999999999999 99999999999999999999998
Q ss_pred eecccccccccccccceeccccccccccccCcccC-----CCCCCCccchHHHHHHHHHHHhC-CCCCCccccCCc---c
Q 001974 822 DFGLARVRQEVSNLTQSCSVGVRGTIGYAAPEYGL-----GSEVSTNGDIYSYGILLLEMVTG-KKPTDVMFEGDL---N 892 (988)
Q Consensus 822 DfG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg-~~p~~~~~~~~~---~ 892 (988)
|=..-..... .......+|...|.+||.-. +...+...|-|.+||++++++.| +.||........ .
T Consensus 160 dsDsfqi~~n-----g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p 234 (637)
T COG4248 160 DSDSFQINAN-----GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNP 234 (637)
T ss_pred cccceeeccC-----CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCc
Confidence 8544333211 11222357899999999744 34557789999999999999885 999976533211 1
Q ss_pred hHHHHHHHHhhhhhhhhc--cccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcccCcC--CCCCCCHHHHHHHH
Q 001974 893 LHNYARTALLDHVIDIVD--PILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVACSVES--PQDRMSITNVVHEL 968 (988)
Q Consensus 893 ~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPs~~evl~~L 968 (988)
+...+.. ..+...-+ +-+...+..| .-.-.|+.+..+..+|+... |.-|||++.++..|
T Consensus 235 ~E~~Ia~---g~f~ya~~~~~g~~p~P~~~--------------P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl 297 (637)
T COG4248 235 LETDIAH---GRFAYASDQRRGLKPPPRSI--------------PLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAAL 297 (637)
T ss_pred chhhhhc---ceeeechhccCCCCCCCCCC--------------ChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Confidence 1100000 00000000 0000001110 11235778899999999754 67899999999999
Q ss_pred HHHHHHhhhhccc
Q 001974 969 QSVKNALLEAWNC 981 (988)
Q Consensus 969 ~~i~~~~~~~~~~ 981 (988)
.++.+++.+|...
T Consensus 298 ~al~~~L~~C~v~ 310 (637)
T COG4248 298 DALRQQLKKCTVS 310 (637)
T ss_pred HHHHHhhhhhhhc
Confidence 9999998887543
No 476
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.09 E-value=2e-12 Score=132.39 Aligned_cols=257 Identities=20% Similarity=0.242 Sum_probs=137.0
Q ss_pred ccccCCCCCCEEEcCCCcccc----cCCcccCCCCCCcEEECCCC---CCCCcCCccc-------ccCCCCceeecCccc
Q 001974 50 PYIGNLSFLREINLMNNSIQG----EIPREFGRLFRLEALFLSDN---DLVGEIPANL-------SYCSRLTILFLGRNK 115 (988)
Q Consensus 50 ~~l~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~n---~l~~~~p~~~-------~~l~~L~~L~L~~N~ 115 (988)
+.+.....+++|+||+|.+.. .+...+...++|+..++|+- ++...+|.++ ...++|++||||.|-
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 344556677778888887753 23344566677777777763 3333444433 345577777777777
Q ss_pred ccCCCcccc----cCcccccccccccccccCCCCCcccCCCccceeeccccccCCCCCccccCcccccccccccccccC-
Q 001974 116 LMGSIPFEF----FSLYKLKQLAMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANNLSG- 190 (988)
Q Consensus 116 i~~~~~~~~----~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~- 190 (988)
+....+..| .++..|++|+|.+|.+.-.--..++ ..|.+|. .|+. .+.-++|++++.++|++..
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNKK-------AASKPKLRVFICGRNRLENG 172 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHhc-------cCCCcceEEEEeeccccccc
Confidence 654444333 3566788888887776511111111 1233333 2221 1223568888888888763
Q ss_pred ---ccchhhccccCccEEEeccCCCCCCCC---CcccccCCCCcceeccccccccccCcccccCCcccEEEeccccccCc
Q 001974 191 ---IIPPSIYNLSLLANFSVPRNQFHGSLP---PSLGLTLPHLRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSGK 264 (988)
Q Consensus 191 ---~~~~~l~~l~~L~~L~L~~N~i~~~lp---~~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~~ 264 (988)
.+...|...+.|+.+.++.|.|....- ...+..+++|++|||.+|.++..... .
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~--------------------~ 232 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV--------------------A 232 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH--------------------H
Confidence 234566677788888888888762111 11123455555555555555421110 1
Q ss_pred ccccccCCccccEEecccccCCCCCCCchhhhcccc-cCCCCcEEEeecccCCCC----CCchhhhccccccEEEccCCc
Q 001974 265 LSVNFGGMKNLSYFNVAYNNLGSGESDEMSFMNSLA-NCSNLRTLIFAANKLRGA----LPHSIANLSDQLQNLIMTSNQ 339 (988)
Q Consensus 265 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~-~l~~L~~L~Ls~N~l~~~----~p~~~~~~~~~L~~L~L~~N~ 339 (988)
+...+..+++|+.|+++++.+...+.. .+..++. ..++|+.|.+.+|.++.. +...+.. .+.|..|+|++|.
T Consensus 233 LakaL~s~~~L~El~l~dcll~~~Ga~--a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~e-k~dL~kLnLngN~ 309 (382)
T KOG1909|consen 233 LAKALSSWPHLRELNLGDCLLENEGAI--AFVDALKESAPSLEVLELAGNEITRDAALALAACMAE-KPDLEKLNLNGNR 309 (382)
T ss_pred HHHHhcccchheeecccccccccccHH--HHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhc-chhhHHhcCCccc
Confidence 223344555666666666666544433 2222222 245666666666665521 1122222 2356667777776
Q ss_pred c
Q 001974 340 L 340 (988)
Q Consensus 340 l 340 (988)
+
T Consensus 310 l 310 (382)
T KOG1909|consen 310 L 310 (382)
T ss_pred c
Confidence 6
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.09 E-value=2.7e-11 Score=117.34 Aligned_cols=108 Identities=26% Similarity=0.369 Sum_probs=28.5
Q ss_pred CCCCCCcEEECCCCCCCCcCCcccc-cCCCCceeecCcccccCCCcccccCcccccccccccccccCCCCCcc-cCCCcc
Q 001974 77 GRLFRLEALFLSDNDLVGEIPANLS-YCSRLTILFLGRNKLMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFI-GNLTSL 154 (988)
Q Consensus 77 ~~l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L 154 (988)
.+..++++|+|++|+|+ .+. .++ .+.+|+.|||++|+|+. ++ .+..+++|++|++++|+|+. +.+.+ ..+++|
T Consensus 16 ~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L 90 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNL 90 (175)
T ss_dssp ----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT-
T ss_pred ccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCc-cccchHHhCCcC
Confidence 34445677777777776 332 344 45666777777777663 22 35556666666666666663 33233 345666
Q ss_pred ceeeccccccCCCC-CccccCccccccccccccccc
Q 001974 155 ESISLAANAFGGNI-PNSLGQLKELKSLGLGANNLS 189 (988)
Q Consensus 155 ~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~ 189 (988)
++|+|++|+|.... -..+..+++|++|+|.+|.++
T Consensus 91 ~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 91 QELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 66666666665321 123445555555555555554
No 478
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.08 E-value=2.5e-11 Score=138.21 Aligned_cols=152 Identities=28% Similarity=0.277 Sum_probs=66.7
Q ss_pred ccCCCcceEEEeeCccCCCccCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCEEEccccccccccc-ccccccccc
Q 001974 348 IGNLVGLYRLGMGGNQFTGTIPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSELLLNNNSLSGVIP-SCLGSLKQL 426 (988)
Q Consensus 348 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L 426 (988)
+..+++|+.|++++|.|+... .+..++.|+.|++++|.|+ .+ ..+..++.|+.+++++|++..+.+ . ...+.+|
T Consensus 114 l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~-~~-~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l 188 (414)
T KOG0531|consen 114 LSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLIS-DI-SGLESLKSLKLLDLSYNRIVDIENDE-LSELISL 188 (414)
T ss_pred hhhhhcchheecccccccccc--chhhccchhhheeccCcch-hc-cCCccchhhhcccCCcchhhhhhhhh-hhhccch
Confidence 444455555555555555221 1334444555555555554 12 223335555555555555553322 1 3444555
Q ss_pred ceeecCCCCCCccCchhhhhhcccccceecccccccCCCcccccccc--ccceeecCCcccccccCcccccCCCCcEEEe
Q 001974 427 AILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLK--YLRVFNVSSNNLSGEIPSQLGLCSYLEEIYM 504 (988)
Q Consensus 427 ~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~--~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 504 (988)
+.+++.+|.+. .+ ..+..+..+ ..+++..|.++..-+ +..+. .|+.+++++|++. .++..+..+.++..|++
T Consensus 189 ~~l~l~~n~i~-~i-~~~~~~~~l-~~~~l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~ 262 (414)
T KOG0531|consen 189 EELDLGGNSIR-EI-EGLDLLKKL-VLLSLLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDL 262 (414)
T ss_pred HHHhccCCchh-cc-cchHHHHHH-HHhhcccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccch
Confidence 55555555554 11 122222222 233445555442211 11111 2455555555555 33344444444555555
Q ss_pred cCcccc
Q 001974 505 RGNFFH 510 (988)
Q Consensus 505 ~~N~l~ 510 (988)
.+|++.
T Consensus 263 ~~n~~~ 268 (414)
T KOG0531|consen 263 SSNRIS 268 (414)
T ss_pred hhcccc
Confidence 555444
No 479
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.06 E-value=6.3e-11 Score=137.67 Aligned_cols=253 Identities=25% Similarity=0.283 Sum_probs=172.2
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeecccc---chhHHHHHHHHHHHhcCCCCceEEEeecccccccCC
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH---GASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGN 737 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 737 (988)
..+++.+.+-+-+|.++.++.+.-...|...+.|+...... ...+....+-.+.-..++|-+++.... +...
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~r 876 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPCR 876 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCCC
Confidence 45677888888999999999888776775555555432111 111222222222222345555554433 3455
Q ss_pred CceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc
Q 001974 738 DFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI 817 (988)
Q Consensus 738 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 817 (988)
...++|++|..+++|...++... ..+..........+..+.+|||+. .++|||++|.|.+...++.
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~-----------~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh 942 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSG-----------CLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGH 942 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCC-----------CcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCC
Confidence 77899999999999999887664 234444556677788999999997 7999999999999999999
Q ss_pred EEEeeecccccccccc---------------------------cccceeccccccccccccCcccCCCCCCCccchHHHH
Q 001974 818 AHVGDFGLARVRQEVS---------------------------NLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYG 870 (988)
Q Consensus 818 ~kL~DfG~a~~~~~~~---------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG 870 (988)
.+++|||......-.. ...........||+.|.|||...+......+|.|+.|
T Consensus 943 ~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g 1022 (1205)
T KOG0606|consen 943 RPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSG 1022 (1205)
T ss_pred cccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhh
Confidence 9999998443221100 0000113346799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccccchhHHHHHHhhcc
Q 001974 871 ILLLEMVTGKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGKIECPISMVRIGVAC 950 (988)
Q Consensus 871 ~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 950 (988)
++++|.++|.+||......+ +++..+..+ ..+...+.+.+.+..+++...
T Consensus 1023 ~~l~e~l~g~pp~na~tpq~-----------------~f~ni~~~~-------------~~~p~g~~~~s~~aq~~~~~l 1072 (1205)
T KOG0606|consen 1023 VCLFEVLTGIPPFNAETPQQ-----------------IFENILNRD-------------IPWPEGPEEGSYEAQDLINRL 1072 (1205)
T ss_pred hhhhhhhcCCCCCCCcchhh-----------------hhhccccCC-------------CCCCCCccccChhhhhhhhhh
Confidence 99999999999987432221 111111111 112233456677788999999
Q ss_pred cCcCCCCCCCHH
Q 001974 951 SVESPQDRMSIT 962 (988)
Q Consensus 951 l~~dP~~RPs~~ 962 (988)
+..+|.+|-.|.
T Consensus 1073 l~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1073 LTEEPTQRLGAK 1084 (1205)
T ss_pred hccCchhccCcc
Confidence 999999997665
No 480
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.05 E-value=1.1e-11 Score=126.98 Aligned_cols=237 Identities=22% Similarity=0.254 Sum_probs=149.2
Q ss_pred CCCcEEEEEcCCCCCcc----cccccccCCCCCCEEEcCCCc---ccccCCc-------ccCCCCCCcEEECCCCCCCCc
Q 001974 30 RHRRVTVLNLRSKGLSG----SLSPYIGNLSFLREINLMNNS---IQGEIPR-------EFGRLFRLEALFLSDNDLVGE 95 (988)
Q Consensus 30 ~~~~v~~l~l~~~~~~~----~~~~~l~~l~~L~~L~L~~n~---l~~~~p~-------~~~~l~~L~~L~Ls~n~l~~~ 95 (988)
....++.++|++|-+.. .+.+.+.+.+.|+..++|+-- +...+|+ ++.+.++|++|+||+|-+.-.
T Consensus 28 ~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~ 107 (382)
T KOG1909|consen 28 PMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPK 107 (382)
T ss_pred ccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCcc
Confidence 34678999999999864 344567778999999998742 2234443 456678999999999998865
Q ss_pred CCccc----ccCCCCceeecCcccccCCCccc-------------ccCcccccccccccccccCC----CCCcccCCCcc
Q 001974 96 IPANL----SYCSRLTILFLGRNKLMGSIPFE-------------FFSLYKLKQLAMQRNNLTGG----IPPFIGNLTSL 154 (988)
Q Consensus 96 ~p~~~----~~l~~L~~L~L~~N~i~~~~~~~-------------~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L 154 (988)
-+..| ..+.+|+.|.|.+|.+.-..-.. ...-++|+++...+|++... +...|...+.|
T Consensus 108 g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~l 187 (382)
T KOG1909|consen 108 GIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTL 187 (382)
T ss_pred chHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhcccc
Confidence 55444 56789999999999886222222 22345677777777777522 22345666777
Q ss_pred ceeeccccccCCC----CCccccCcccccccccccccccC----ccchhhccccCccEEEeccCCCCCCCCCcccccCCC
Q 001974 155 ESISLAANAFGGN----IPNSLGQLKELKSLGLGANNLSG----IIPPSIYNLSLLANFSVPRNQFHGSLPPSLGLTLPH 226 (988)
Q Consensus 155 ~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~i~~~lp~~~~~~l~~ 226 (988)
+.+.++.|.|... ...+|.++++|++|||.+|-++. .+..++..++.|++|++++|.+.......++..
T Consensus 188 eevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~a--- 264 (382)
T KOG1909|consen 188 EEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDA--- 264 (382)
T ss_pred ceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHH---
Confidence 7777777777521 22356677777777777777762 234556666677777777776653322222110
Q ss_pred CcceeccccccccccCcccccCCcccEEEeccccccC----cccccccCCccccEEecccccCC
Q 001974 227 LRLFQVHHNFFSGSIPISLSNASKLEFIEALDNSFSG----KLSVNFGGMKNLSYFNVAYNNLG 286 (988)
Q Consensus 227 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~N~i~~----~~~~~~~~l~~L~~L~L~~N~l~ 286 (988)
.-...++|+.|.+.+|.|+. .+.......+.|..|+|++|.+.
T Consensus 265 -----------------l~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 265 -----------------LKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred -----------------HhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 00123445555555555532 12223444677777777777774
No 481
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=3.3e-09 Score=100.55 Aligned_cols=129 Identities=24% Similarity=0.314 Sum_probs=96.7
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccc--cc------hhHHHHHHHHHHHhcCC--CCceEEEeecccccccCCC
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQR--HG------ASKSFLAECKALKNIRH--RNLVKVITSCSSIDFQGND 738 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~--~~------~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~ 738 (988)
..+++|+-+.||.+.+ -|..+++|.=.+.. .. ......+|++++.+++- -++..++++ +++
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPD 72 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCC
Confidence 4678999999999977 55567777532211 11 12456789999998853 344555554 346
Q ss_pred ceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcE
Q 001974 739 FKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIA 818 (988)
Q Consensus 739 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 818 (988)
...|+|||++|..|.+++... ...++..+-.-+.-||.. +|||+|+.++||++..+. +
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~------------------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i 130 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA------------------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-I 130 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc------------------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-E
Confidence 678999999999999888643 134667777888899999 999999999999998765 8
Q ss_pred EEeeeccccc
Q 001974 819 HVGDFGLARV 828 (988)
Q Consensus 819 kL~DfG~a~~ 828 (988)
.++|||++..
T Consensus 131 ~~IDfGLg~~ 140 (204)
T COG3642 131 YFIDFGLGEF 140 (204)
T ss_pred EEEECCcccc
Confidence 9999999974
No 482
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=4e-11 Score=126.20 Aligned_cols=208 Identities=20% Similarity=0.201 Sum_probs=100.1
Q ss_pred cCCcccEEEeccccccCccc-ccccCCccccEEecccccCCCCCCCchhhhcccccCCCCcEEEeecccCCCCCCchhhh
Q 001974 247 NASKLEFIEALDNSFSGKLS-VNFGGMKNLSYFNVAYNNLGSGESDEMSFMNSLANCSNLRTLIFAANKLRGALPHSIAN 325 (988)
Q Consensus 247 ~l~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 325 (988)
++.+|+.+.|.+..+..... .....+++++.||||.|-+....+ ...-...+++|+.|+|+.|++.-........
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~----v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~ 194 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFP----VLKIAEQLPSLENLNLSSNRLSNFISSNTTL 194 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHH----HHHHHHhcccchhcccccccccCCccccchh
Confidence 44445555555544443221 233445666666666665543211 1112344555666666665554211111111
Q ss_pred ccccccEEEccCCccccCCCccccCCCcceEEEeeCccCCCc-cCcccCCCCccCeEecccccCCCCCCCCCCCCCCCCE
Q 001974 326 LSDQLQNLIMTSNQLHGSIPSGIGNLVGLYRLGMGGNQFTGT-IPKEMGKLQNLEGMGLYDNQLSGEIPSSLGNLSILSE 404 (988)
Q Consensus 326 ~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 404 (988)
.++.|+.|.|+.|.++-. +......+++|+.|+|..|...........-+..|++
T Consensus 195 ------------------------~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~ 250 (505)
T KOG3207|consen 195 ------------------------LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQE 250 (505)
T ss_pred ------------------------hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhh
Confidence 334455555555555411 1122334455555555555322233333444555555
Q ss_pred EEccccccccccc--cccccccccceeecCCCCCCccC--chh-----hhhhcccccceecccccccCCCc--ccccccc
Q 001974 405 LLLNNNSLSGVIP--SCLGSLKQLAILHLFENGLNGTI--PEE-----IFNLTYLSNSLNLARNHLVGSIP--TKIGNLK 473 (988)
Q Consensus 405 L~L~~N~l~~~~p--~~~~~l~~L~~L~l~~N~l~~~~--p~~-----~~~l~~l~~~L~ls~N~l~~~~p--~~~~~l~ 473 (988)
|+|++|++.. .+ ...+.++.|+.|+++.+.+. ++ |+. ....+++ ++|+++.|++. ..+ ..+..++
T Consensus 251 LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~-si~~~d~~s~~kt~~f~kL-~~L~i~~N~I~-~w~sl~~l~~l~ 326 (505)
T KOG3207|consen 251 LDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIA-SIAEPDVESLDKTHTFPKL-EYLNISENNIR-DWRSLNHLRTLE 326 (505)
T ss_pred ccccCCcccc-cccccccccccchhhhhccccCcc-hhcCCCccchhhhcccccc-eeeecccCccc-cccccchhhccc
Confidence 5665555542 22 23445555555666555555 22 221 2334455 66666666664 222 2344566
Q ss_pred ccceeecCCcccc
Q 001974 474 YLRVFNVSSNNLS 486 (988)
Q Consensus 474 ~L~~L~ls~N~l~ 486 (988)
+|+.|....|.|+
T Consensus 327 nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 327 NLKHLRITLNYLN 339 (505)
T ss_pred hhhhhhccccccc
Confidence 7777777788877
No 483
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.99 E-value=1.3e-08 Score=110.04 Aligned_cols=183 Identities=19% Similarity=0.206 Sum_probs=139.0
Q ss_pred cceeEEEEEECCCCeEEEEEEeeccccchhHHHHHHHHHHHhcCCCCceEEEeecccccccCCCceEEEEeeccc-cchh
Q 001974 675 SFGSVYKGAFDQDGTIVAIKVFNLQRHGASKSFLAECKALKNIRHRNLVKVITSCSSIDFQGNDFKALVYEFMTN-GSLE 753 (988)
Q Consensus 675 ~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 753 (988)
-..+.|++....+|..|++|++...+.........-+++++++.|+|||++.+++....| .+...++||+|+++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHH
Confidence 345789999999999999999965444444445567889999999999999998875444 34678999999987 5887
Q ss_pred hhcCCCCCCC----chhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccc
Q 001974 754 NWLHPDAVPQ----KDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVR 829 (988)
Q Consensus 754 ~~l~~~~~~~----~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 829 (988)
++........ ..........++..+|.++.|++.||.++|+. |+.-+-+.+.+|+++.+.+++|+..|.....
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 7654433211 12223334678899999999999999999999 9999999999999999999999988877654
Q ss_pred cccccccceeccccccccccccCcccCCCCCCCccchHHHHHHHHHHHhCCCC
Q 001974 830 QEVSNLTQSCSVGVRGTIGYAAPEYGLGSEVSTNGDIYSYGILLLEMVTGKKP 882 (988)
Q Consensus 830 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p 882 (988)
...+. |-+. --.+-|.=.||.++..|.||..-
T Consensus 444 ~~d~~------------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDPT------------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCCC------------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 43220 1111 12357999999999999999654
No 484
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.97 E-value=7.1e-09 Score=108.04 Aligned_cols=146 Identities=19% Similarity=0.206 Sum_probs=108.3
Q ss_pred CceeccccceeEEEEEECCCCeEEEEEEeecccc-chhHHHHHHHHHHHhcCC--CCceEEEeecccccccCCCceEEEE
Q 001974 668 THLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH-GASKSFLAECKALKNIRH--RNLVKVITSCSSIDFQGNDFKALVY 744 (988)
Q Consensus 668 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~lv~ 744 (988)
.+.++.|..+.||+++.. +|+.+++|+...... ....++..|+++++.+.+ ..+.+++.+..... ..+..++||
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~ 79 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVM 79 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEE
Confidence 367899999999999885 468899999754322 134678899999999965 34577777643321 113568999
Q ss_pred eeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCC----------------------------
Q 001974 745 EFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHC---------------------------- 796 (988)
Q Consensus 745 e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~---------------------------- 796 (988)
||++|.++.+.+... .++..+...++.++++++++||+..
T Consensus 80 e~i~G~~l~~~~~~~------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (223)
T cd05154 80 ERVDGRVLRDRLLRP------------ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYD 147 (223)
T ss_pred EEeCCEecCCCCCCC------------CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHH
Confidence 999999888765321 3566677777888888888887531
Q ss_pred -------------------------CCCeEeccCCCCCeeeCC--CCcEEEeeeccccc
Q 001974 797 -------------------------QEPVLHCDLKPGNVLLDN--DMIAHVGDFGLARV 828 (988)
Q Consensus 797 -------------------------~~~ivH~Dlkp~NIll~~--~~~~kL~DfG~a~~ 828 (988)
...++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 148 ASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred hhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66789999998864
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.95 E-value=5e-10 Score=135.71 Aligned_cols=129 Identities=26% Similarity=0.330 Sum_probs=78.0
Q ss_pred CCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCC--CCCcCCcccccCCCCceeecCcccccCCCcccccCccccccc
Q 001974 56 SFLREINLMNNSIQGEIPREFGRLFRLEALFLSDND--LVGEIPANLSYCSRLTILFLGRNKLMGSIPFEFFSLYKLKQL 133 (988)
Q Consensus 56 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~--l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 133 (988)
...+...+-+|++. .++.... .++|++|-+..|. +....+..|..++.|++|||++|.=-+.+|..+++|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 55666666666665 3444332 2356666666664 442333345666666666666665445666666666666666
Q ss_pred ccccccccCCCCCcccCCCccceeeccccccCCCCCccccCccccccccccccc
Q 001974 134 AMQRNNLTGGIPPFIGNLTSLESISLAANAFGGNIPNSLGQLKELKSLGLGANN 187 (988)
Q Consensus 134 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 187 (988)
+|++..++ .+|..+++|..|.+|++..+.-...+|..+..|.+|++|.+-.-.
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 66666666 566666666666666666665444455555666666666665443
No 486
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.94 E-value=6.3e-09 Score=102.83 Aligned_cols=126 Identities=23% Similarity=0.281 Sum_probs=84.0
Q ss_pred eEEEEEECCCCeEEEEEEeecccc-------------c-------------hhHHHHHHHHHHHhcCCC--CceEEEeec
Q 001974 678 SVYKGAFDQDGTIVAIKVFNLQRH-------------G-------------ASKSFLAECKALKNIRHR--NLVKVITSC 729 (988)
Q Consensus 678 ~Vy~a~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--niv~~~~~~ 729 (988)
.||.|... +|..+|||+.+.... . ......+|++.|.++... ++.+++++
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~- 78 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY- 78 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE-
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE-
Confidence 38999885 888999999853210 0 013467899999999654 67788776
Q ss_pred ccccccCCCceEEEEeecc--ccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHH-HHcCCCCCeEeccCC
Q 001974 730 SSIDFQGNDFKALVYEFMT--NGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDY-LHHHCQEPVLHCDLK 806 (988)
Q Consensus 730 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivH~Dlk 806 (988)
..-++||||++ |..+..+... .++......++.+++..+.. +|.. ||||||+.
T Consensus 79 --------~~~~ivME~I~~~G~~~~~l~~~-------------~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs 134 (188)
T PF01163_consen 79 --------NRNVIVMEYIGEDGVPLPRLKDV-------------DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLS 134 (188)
T ss_dssp --------ETTEEEEE--EETTEEGGCHHHC-------------GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-S
T ss_pred --------eCCEEEEEecCCCccchhhHHhc-------------cccchhHHHHHHHHHHHHHHHHHhc---CceecCCC
Confidence 34579999997 5555443321 11233456678888886666 4677 99999999
Q ss_pred CCCeeeCCCCcEEEeeeccccccc
Q 001974 807 PGNVLLDNDMIAHVGDFGLARVRQ 830 (988)
Q Consensus 807 p~NIll~~~~~~kL~DfG~a~~~~ 830 (988)
+.||+++++ .+.++|||.+....
T Consensus 135 ~~NIlv~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 135 EYNILVDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp TTSEEEETT-CEEE--GTTEEETT
T ss_pred hhhEEeecc-eEEEEecCcceecC
Confidence 999999987 99999999887543
No 487
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.92 E-value=8.5e-09 Score=96.96 Aligned_cols=141 Identities=25% Similarity=0.309 Sum_probs=100.3
Q ss_pred CCceeccccceeEEEEEECCCCeEEEEEEeecc--cc------chhHHHHHHHHHHHhcCCCC--ceEEEeecccccccC
Q 001974 667 STHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQ--RH------GASKSFLAECKALKNIRHRN--LVKVITSCSSIDFQG 736 (988)
Q Consensus 667 ~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~--~~------~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~ 736 (988)
....+.+|+-+.|+++.+ .|+.++||.-... +. -..++..+|++.+.+++--. +.+++.+ +
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~-------D 81 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI-------D 81 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE-------e
Confidence 567899999999999998 7888788753211 11 11246788999999885322 2233321 2
Q ss_pred CCceEEEEeeccc-cchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCC
Q 001974 737 NDFKALVYEFMTN-GSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDND 815 (988)
Q Consensus 737 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~ 815 (988)
...-.|+|||++| .++.+++...... .........++..|-+.+.-||.. +||||||..+||++..+
T Consensus 82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~---------~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~ 149 (229)
T KOG3087|consen 82 TYGGQIYMEFIDGASTVKDFILSTMED---------ESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSD 149 (229)
T ss_pred cCCCeEEEEeccchhHHHHHHHHHccC---------cccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecC
Confidence 2445799999966 4888888654421 122222367889999999999999 99999999999999655
Q ss_pred C---cEEEeeeccccc
Q 001974 816 M---IAHVGDFGLARV 828 (988)
Q Consensus 816 ~---~~kL~DfG~a~~ 828 (988)
+ .+.++|||++..
T Consensus 150 ~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 150 GNQITPILIDFGLSSV 165 (229)
T ss_pred CCcCceEEEeecchhc
Confidence 4 468999999864
No 488
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.87 E-value=1.2e-08 Score=102.66 Aligned_cols=135 Identities=23% Similarity=0.196 Sum_probs=100.4
Q ss_pred CCCCceeccccceeEEEEEECCCCeEEEEEEeecccc----------------------chhHHHHHHHHHHHhcCCC--
Q 001974 665 FSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRH----------------------GASKSFLAECKALKNIRHR-- 720 (988)
Q Consensus 665 y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~-- 720 (988)
+.+...||-|.-+.||.|... .|.++|||.-+.... .......+|.++|.++...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 345689999999999999996 899999997542111 0113567899999999544
Q ss_pred CceEEEeecccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCe
Q 001974 721 NLVKVITSCSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPV 800 (988)
Q Consensus 721 niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 800 (988)
.|.+.+++ +..++||||++|-.|...- ++....-.++..|++-+.-+-.. ||
T Consensus 172 ~VP~P~~~---------nRHaVvMe~ieG~eL~~~r----------------~~~en~~~il~~il~~~~~~~~~---Gi 223 (304)
T COG0478 172 KVPKPIAW---------NRHAVVMEYIEGVELYRLR----------------LDVENPDEILDKILEEVRKAYRR---GI 223 (304)
T ss_pred CCCCcccc---------ccceeeeehcccceeeccc----------------CcccCHHHHHHHHHHHHHHHHHc---Cc
Confidence 78888877 6678999999886665432 12333444555566555555565 99
Q ss_pred EeccCCCCCeeeCCCCcEEEeeeccccc
Q 001974 801 LHCDLKPGNVLLDNDMIAHVGDFGLARV 828 (988)
Q Consensus 801 vH~Dlkp~NIll~~~~~~kL~DfG~a~~ 828 (988)
||||+++-||+++++|.+.++||--+..
T Consensus 224 VHGDlSefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 224 VHGDLSEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred cccCCchheEEEecCCCEEEEeCccccc
Confidence 9999999999999999999999976653
No 489
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.82 E-value=2.4e-09 Score=85.23 Aligned_cols=61 Identities=34% Similarity=0.415 Sum_probs=38.4
Q ss_pred CCCCEEEcCCCcccccCCcccCCCCCCcEEECCCCCCCCcCCcccccCCCCceeecCcccc
Q 001974 56 SFLREINLMNNSIQGEIPREFGRLFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNKL 116 (988)
Q Consensus 56 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~i 116 (988)
++|++|+|++|+|+.+.+..|.++++|++|++++|.++...|.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3456666666666655555666666666666666666655556666666666666666654
No 490
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.81 E-value=6.3e-08 Score=101.88 Aligned_cols=146 Identities=14% Similarity=0.046 Sum_probs=100.0
Q ss_pred ceeccccceeEEEEEECCCCeEEEEEEeeccccc-hh----------HHHHHHHHHHHhcCC--CCceEEEeeccccccc
Q 001974 669 HLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHG-AS----------KSFLAECKALKNIRH--RNLVKVITSCSSIDFQ 735 (988)
Q Consensus 669 ~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-~~----------~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~ 735 (988)
+.+-+.....|++++. .|+.|.||........ .. ..+.+|...+.++.. -.+.+.+++.......
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 4444444455777766 7889999987432211 01 147789888888832 2233444443221111
Q ss_pred CCCceEEEEeecccc-chhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCC
Q 001974 736 GNDFKALVYEFMTNG-SLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDN 814 (988)
Q Consensus 736 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~ 814 (988)
.....++|||++++. +|.+++..... .+.+...+..++.+++..+.-||+. ||+|||++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~---------~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWAT---------NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHL 173 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcc---------cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEec
Confidence 124568999999875 89988753211 1345667788999999999999999 9999999999999975
Q ss_pred -------CCcEEEeeeccccc
Q 001974 815 -------DMIAHVGDFGLARV 828 (988)
Q Consensus 815 -------~~~~kL~DfG~a~~ 828 (988)
++.+.++||+.+..
T Consensus 174 ~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 174 PFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred cccCCCCCceEEEEECCcccc
Confidence 46899999998853
No 491
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.80 E-value=4.3e-09 Score=127.72 Aligned_cols=130 Identities=27% Similarity=0.375 Sum_probs=91.1
Q ss_pred CCCCcEEECCCCCCCCcCCcccccCCCCceeecCccc--ccCCCcccccCcccccccccccccccCCCCCcccCCCccce
Q 001974 79 LFRLEALFLSDNDLVGEIPANLSYCSRLTILFLGRNK--LMGSIPFEFFSLYKLKQLAMQRNNLTGGIPPFIGNLTSLES 156 (988)
Q Consensus 79 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~--i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 156 (988)
....++..+-+|.+. .++.... .++|++|-+.+|. +....++.|..++.|++|||++|.=-+.+|+.++.|-+|++
T Consensus 522 ~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 356777777777777 5555443 3367777777775 44344445666788888888877655577777777888888
Q ss_pred eeccccccCCCCCccccCcccccccccccccccCccchhhccccCccEEEeccCC
Q 001974 157 ISLAANAFGGNIPNSLGQLKELKSLGLGANNLSGIIPPSIYNLSLLANFSVPRNQ 211 (988)
Q Consensus 157 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 211 (988)
|+|++..++ .+|..+.+|..|.+|++..+.-...+|.....+++|++|.+....
T Consensus 600 L~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 600 LDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc
Confidence 888877777 677777777788888877776555556666667777777776544
No 492
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.79 E-value=4.5e-09 Score=83.65 Aligned_cols=61 Identities=28% Similarity=0.377 Sum_probs=42.3
Q ss_pred cccceeecCCcccccccCcccccCCCCcEEEecCccccccCCccccCccccCeeecCCCcc
Q 001974 473 KYLRVFNVSSNNLSGEIPSQLGLCSYLEEIYMRGNFFHGSIPSSLSSLRAVLAIDLSRNNL 533 (988)
Q Consensus 473 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 533 (988)
++|++|++++|+|+...+..|..+++|++|++++|++++..|..|..+++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3567777777777744445667777777777777777766666777777777777777764
No 493
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.65 E-value=7.8e-09 Score=116.34 Aligned_cols=152 Identities=17% Similarity=0.287 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeecccccccccccc-----cceeccccccccccccCcccCC
Q 001974 783 IDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQEVSNL-----TQSCSVGVRGTIGYAAPEYGLG 857 (988)
Q Consensus 783 ~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~ 857 (988)
.+++.|+.|+|.. .++||++|.|++|.++..+..||+.|+.+........+ +.....-......|.|||++.+
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 3455899999987 69999999999999999999999999988755442211 1111111234568999999999
Q ss_pred CCCCCccchHHHHHHHHHHHh-CCCCCCccccCCcchHHHHHHHHhhhhhhhhccccccCcchhhhhhHHHHhhhhhccc
Q 001974 858 SEVSTNGDIYSYGILLLEMVT-GKKPTDVMFEGDLNLHNYARTALLDHVIDIVDPILINDVEDWDATNKQRLRQAKINGK 936 (988)
Q Consensus 858 ~~~~~~sDvwslG~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~ 936 (988)
...+.++|+||+||++|.+.. |+.-+... .. .......+. .. ........
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-~~-~~~~~~~~~--~~-------------------------~~~~~~~s 234 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAAN-GG-LLSYSFSRN--LL-------------------------NAGAFGYS 234 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhcc-CC-cchhhhhhc--cc-------------------------cccccccc
Confidence 888999999999999999995 55443311 11 000000000 00 00011122
Q ss_pred cchhHHHHHHhhcccCcCCCCCCCHHHHH
Q 001974 937 IECPISMVRIGVACSVESPQDRMSITNVV 965 (988)
Q Consensus 937 ~~~~~~l~~li~~cl~~dP~~RPs~~evl 965 (988)
.++|.++.+=+.+++..++.-||++.++.
T Consensus 235 ~~~p~el~~~l~k~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 235 NNLPSELRESLKKLLNGDSAVRPTLDLLL 263 (700)
T ss_pred ccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence 47888999999999999999999777654
No 494
>PRK09902 hypothetical protein; Provisional
Probab=98.60 E-value=5.6e-07 Score=89.16 Aligned_cols=143 Identities=17% Similarity=0.141 Sum_probs=104.7
Q ss_pred eccccceeEEEEEECCCCeEEEEEEeecc-----c-cchhHHHHHHHHHHHhcC--CCCceEEEeecccccccCCCceEE
Q 001974 671 IGMGSFGSVYKGAFDQDGTIVAIKVFNLQ-----R-HGASKSFLAECKALKNIR--HRNLVKVITSCSSIDFQGNDFKAL 742 (988)
Q Consensus 671 lg~G~~g~Vy~a~~~~~~~~vavK~~~~~-----~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~l 742 (988)
-|+||-+.|+.... .|+.+-+|.-... . +-....|.+|+..+.++. .-.+.+++ ++........-..+|
T Consensus 26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 36789999999887 4557888876411 1 234578999999999984 33355555 322111222344689
Q ss_pred EEeeccc-cchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCc--EE
Q 001974 743 VYEFMTN-GSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMI--AH 819 (988)
Q Consensus 743 v~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~k 819 (988)
|+|-+++ .+|.+++..... .+.+......+..++++.++-||+. |+.|+|+.+.||+++.++. ++
T Consensus 103 VTe~L~g~~~L~~~l~~~~~---------~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~ 170 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAV---------SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAG 170 (216)
T ss_pred EEEeCCCCccHHHHHhcCCc---------CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEE
Confidence 9998854 589888865432 2457777889999999999999999 9999999999999986666 99
Q ss_pred Eeeeccccc
Q 001974 820 VGDFGLARV 828 (988)
Q Consensus 820 L~DfG~a~~ 828 (988)
++||.-++.
T Consensus 171 lIDlEk~r~ 179 (216)
T PRK09902 171 FLDLEKSRR 179 (216)
T ss_pred EEEhhccch
Confidence 999987763
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.59 E-value=3.8e-09 Score=93.74 Aligned_cols=134 Identities=19% Similarity=0.265 Sum_probs=75.3
Q ss_pred cceeecCCCCCCccCchhhhhhcccc--cceecccccccCCCcccccc-ccccceeecCCcccccccCcccccCCCCcEE
Q 001974 426 LAILHLFENGLNGTIPEEIFNLTYLS--NSLNLARNHLVGSIPTKIGN-LKYLRVFNVSSNNLSGEIPSQLGLCSYLEEI 502 (988)
Q Consensus 426 L~~L~l~~N~l~~~~p~~~~~l~~l~--~~L~ls~N~l~~~~p~~~~~-l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 502 (988)
+-.++|+.+++. .+++....+.... ...+|++|.+. .+|..|.. .+.++.|+|++|+|+ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445555555553 4555444433321 33466666665 44444443 335666777777777 566667777777777
Q ss_pred EecCccccccCCccccCccccCeeecCCCcccCcCcccccCCCCcEEeCCCCcCcccCCCC
Q 001974 503 YMRGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGLIPKFLEDLSLEYLNLSFNDLEGEVPTK 563 (988)
Q Consensus 503 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~l~l~~N~l~~~~p~~ 563 (988)
+++.|.|. ..|..+..|.+|-.||.-+|.+..++-+.......-..++.++.+.+..|..
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~~~~~k 165 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGDETKKK 165 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccccCccc
Confidence 77777776 6666666677777777777776655444221112222344555555555543
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.58 E-value=1.4e-09 Score=120.98 Aligned_cols=123 Identities=28% Similarity=0.322 Sum_probs=52.1
Q ss_pred cceeecCCCCCCccCchhhhhhcccccceecccccccCCCccccccccccceeecCCcccccccCcc-cccCCCCcEEEe
Q 001974 426 LAILHLFENGLNGTIPEEIFNLTYLSNSLNLARNHLVGSIPTKIGNLKYLRVFNVSSNNLSGEIPSQ-LGLCSYLEEIYM 504 (988)
Q Consensus 426 L~~L~l~~N~l~~~~p~~~~~l~~l~~~L~ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~L 504 (988)
|...+.+.|++. .+..++.-++.+ +.|||++|+++ ... .+..|+.|++|||+.|.+. .+|.. ...|. |..|.|
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~al-e~LnLshNk~~-~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPAL-ESLNLSHNKFT-KVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHh-hhhccchhhhh-hhH-HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 444444444444 344444444444 44444444444 211 3444444455555555444 33321 11222 444555
Q ss_pred cCccccccCCccccCccccCeeecCCCcccCcCcc--cccCCCCcEEeCCCCcC
Q 001974 505 RGNFFHGSIPSSLSSLRAVLAIDLSRNNLSGLIPK--FLEDLSLEYLNLSFNDL 556 (988)
Q Consensus 505 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~--~~~~~~L~~l~l~~N~l 556 (988)
++|-++.. ..+.+|++|+.||||+|-|.+--.- .+.+..|..|+|.+|.+
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 55544421 2344444555555555544432211 13333444455555544
No 497
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.56 E-value=7.4e-07 Score=89.19 Aligned_cols=160 Identities=23% Similarity=0.241 Sum_probs=108.8
Q ss_pred HHhhccccCHHHHHHhhCCCCCCceec---cccceeEEEEEECCCCeEEEEEEeeccccch-------------------
Q 001974 646 LRKALQKVSYESLFKATDGFSSTHLIG---MGSFGSVYKGAFDQDGTIVAIKVFNLQRHGA------------------- 703 (988)
Q Consensus 646 ~~~~~~~~~~~~l~~~~~~y~~~~~lg---~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~------------------- 703 (988)
....+...+.+.+....++..+....| +|.-+.||+|... ++..||||+++......
T Consensus 28 ~~~v~D~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~-~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~ 106 (268)
T COG1718 28 VDEVFDKRTLETLRRLLSRGVITELVGCISTGKEANVYLAETG-DGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSN 106 (268)
T ss_pred hhhhhhhHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccC-CCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCC
Confidence 334556667777777777777666555 5666789999874 78999999996321100
Q ss_pred h-----HHHHHHHHHHHhc--CCCCceEEEeecccccccCCCceEEEEeeccccc-hhhhcCCCCCCCchhhhHhhcCCH
Q 001974 704 S-----KSFLAECKALKNI--RHRNLVKVITSCSSIDFQGNDFKALVYEFMTNGS-LENWLHPDAVPQKDVEIEIQKLTL 775 (988)
Q Consensus 704 ~-----~~~~~E~~~l~~l--~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gs-L~~~l~~~~~~~~~~~~~~~~l~~ 775 (988)
. .-..+|+.-|.++ .+-.+.+.+++ ..-.+||||+.... -.-.+. + -++..
T Consensus 107 rr~lv~~W~~kEf~NL~R~~eAGVrvP~Pi~~---------~~nVLvMEfIg~~g~pAP~Lk-------D-----v~~e~ 165 (268)
T COG1718 107 RRKLVFAWARKEFRNLKRAYEAGVRVPEPIAF---------RNNVLVMEFIGDDGLPAPRLK-------D-----VPLEL 165 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCceee---------cCCeEEEEeccCCCCCCCCcc-------c-----CCcCc
Confidence 0 1135577777777 34556666665 34479999994321 001111 1 12333
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCCcEEEeeeccccccc
Q 001974 776 LQRINIAIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDMIAHVGDFGLARVRQ 830 (988)
Q Consensus 776 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 830 (988)
.+...+..++++.+.-|-.. .++||+||+.-|||+. ++.+.|+|||-|....
T Consensus 166 ~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 166 EEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred hhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE-CCeEEEEECccccccC
Confidence 36777888999999988873 2999999999999999 8899999999987554
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.50 E-value=6e-09 Score=92.48 Aligned_cols=9 Identities=22% Similarity=0.276 Sum_probs=3.6
Q ss_pred EEEeeCccC
Q 001974 356 RLGMGGNQF 364 (988)
Q Consensus 356 ~L~L~~N~l 364 (988)
.++|++|++
T Consensus 31 ~ldLssc~l 39 (177)
T KOG4579|consen 31 FLDLSSCQL 39 (177)
T ss_pred hcccccchh
Confidence 334444433
No 499
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.46 E-value=1.3e-06 Score=86.75 Aligned_cols=142 Identities=17% Similarity=0.183 Sum_probs=94.4
Q ss_pred hhCCCCCCceeccccceeEEEEEECCCCeEEEEEEeeccccchhHH---------HHHHHHHHHhc---CCCCceEEEee
Q 001974 661 ATDGFSSTHLIGMGSFGSVYKGAFDQDGTIVAIKVFNLQRHGASKS---------FLAECKALKNI---RHRNLVKVITS 728 (988)
Q Consensus 661 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l---~h~niv~~~~~ 728 (988)
...+|...+++-......|.+... +|+.+++|..+.......+. ..+++..+.++ .-.....++.+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 346788888888877777777666 78999999986443322221 22333333333 22333333333
Q ss_pred cccccccCCCceEEEEeeccccchhhhcCCCCCCCchhhhHhhcCCHHHHHHHHHHHHHHHHHHHcCCCCCeEeccCCCC
Q 001974 729 CSSIDFQGNDFKALVYEFMTNGSLENWLHPDAVPQKDVEIEIQKLTLLQRINIAIDVASAIDYLHHHCQEPVLHCDLKPG 808 (988)
Q Consensus 729 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlkp~ 808 (988)
+....+......++||||++|..|.+... +++ .++..+++++.-+|+. |++|||..|.
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~---------------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpg 164 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED---------------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPG 164 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh---------------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcC
Confidence 33222333355679999999988876642 222 2556788889999999 9999999999
Q ss_pred CeeeCCCCcEEEeeecccc
Q 001974 809 NVLLDNDMIAHVGDFGLAR 827 (988)
Q Consensus 809 NIll~~~~~~kL~DfG~a~ 827 (988)
|+++++++ ++++||+..+
T Consensus 165 NFlv~~~~-i~iID~~~k~ 182 (229)
T PF06176_consen 165 NFLVSNNG-IRIIDTQGKR 182 (229)
T ss_pred cEEEECCc-EEEEECcccc
Confidence 99999654 8999998665
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.46 E-value=1.2e-06 Score=89.29 Aligned_cols=109 Identities=23% Similarity=0.238 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhcC--CCCceEEEeecccccccCCCceEEEEeecccc-chhhhcCCCCCCCchhhhHhhcCCHHHHHHH
Q 001974 705 KSFLAECKALKNIR--HRNLVKVITSCSSIDFQGNDFKALVYEFMTNG-SLENWLHPDAVPQKDVEIEIQKLTLLQRINI 781 (988)
Q Consensus 705 ~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~l~~~~~~~i 781 (988)
....+|...+..+. .-.+.+.+++..... ......++|+|++++. +|.+++.... ..+......+
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~~~~~~-----------~~~~~~~~~l 123 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDLLQQWE-----------QLDPSQRREL 123 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHHHHhhc-----------ccchhhHHHH
Confidence 46778888877773 333555555544321 1124568999999874 8999886532 2455667889
Q ss_pred HHHHHHHHHHHHcCCCCCeEeccCCCCCeeeCCCC---cEEEeeeccccc
Q 001974 782 AIDVASAIDYLHHHCQEPVLHCDLKPGNVLLDNDM---IAHVGDFGLARV 828 (988)
Q Consensus 782 ~~~i~~~L~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kL~DfG~a~~ 828 (988)
+.+++..++-||+. ||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 124 l~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 124 LRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999999 999999999999999887 899999998764
Done!