BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001976
(987 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q64M78|OML4_ORYSJ Protein MEI2-like 4 OS=Oryza sativa subsp. japonica GN=ML4 PE=2 SV=1
Length = 1001
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1035 (52%), Positives = 676/1035 (65%), Gaps = 86/1035 (8%)
Query: 1 MPFEIMDHR----SGSAPT----HFSEEIRFPAERQIGFWKPNTMSDQQGSDGTVPMLGG 52
MP ++MD R S PT FSEE+R P ERQ+GFWK ++ GS
Sbjct: 1 MPSQVMDQRHHMSQYSHPTLAASSFSEELRLPTERQVGFWKQESLPHHMGS--------- 51
Query: 53 KFVASSPMENFSPVGIPSVDWLELQQSTLARDKMKRLGI----VGEEGAANLSENSWNSV 108
K VASSP+E P+G LEL Q RD+ + G+E ANL + W
Sbjct: 52 KSVASSPIEKPQPIGTRMAGRLELLQPYKLRDQGAAFSLEHKLFGQERHANLPPSPW--- 108
Query: 109 NHHPKSWSNLAVQPGINS---LSGNRSGINGIQSESSLFSSSLSDIFTRKMKLSGNEILS 165
P + + S S R NG +E+ LFSSS+SDIF +K++L+ L
Sbjct: 109 --RPDQETGRQTDSSLKSAALFSDGRINPNGAYNENGLFSSSVSDIFDKKLRLTSKNGLV 166
Query: 166 RQPLNAVASHHQPEEPFESLKEIEAQTIGNLLPDEDDLFSGVTDDMGHNFQANTVDDLED 225
Q + V +H +EPFE +EIEAQ IGNLLPD+DDL SGV D++G+ D D
Sbjct: 167 GQSIEKVDLNHVDDEPFELTEEIEAQIIGNLLPDDDDLLSGVVDEVGYP-TNANNRDDAD 225
Query: 226 FDLFSSGGGMELEGDDRLFAVQKNSDFVGGVSNQ-GVSAGSVVGEHPYGEHPSRTLFVRN 284
D+F +GGGMELE D+ +K +F G ++ G+ G + GEH Y E PSRTLFVRN
Sbjct: 226 DDIFYTGGGMELETDEN----KKLQEFNGSANDGIGLLNGVLNGEHLYREQPSRTLFVRN 281
Query: 285 INSNVEDSELKALFEQFGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKL 344
INSNVEDSELK LFE FGDIR +YTACKHRGFVMISYYDIR+A NA LQNK LRRRKL
Sbjct: 282 INSNVEDSELKLLFEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRKL 341
Query: 345 DIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFI 404
DIHYSIPKDNPSEKD NQGT+V+FN+D S++ ++LH+IFG YGEI+EIRDT K +HK I
Sbjct: 342 DIHYSIPKDNPSEKDINQGTIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHHKII 401
Query: 405 EFYDIRAAETALRTLNRSDVAGKQIKLEASRPGGARRFM--VQSEQEQDDLNLCQIPFDD 462
EFYD+RAAE ALR LNR+D+AGK+IKLE SR G ARR + SE Q++ +C++
Sbjct: 402 EFYDVRAAEAALRALNRNDIAGKKIKLETSRLGAARRLSQHMSSELCQEEFGVCKLGSPS 461
Query: 463 LSSGQMVSSG-----VITSTCMDNGSIQVLHSATRSPAIALTESH---------QTSSVP 508
SS + S G ITST +NGSIQ +HS ++ E+ Q+ S P
Sbjct: 462 TSSPPIASFGSTNLATITSTGHENGSIQGMHSGLQTSISQFRETSFPGLSSTIPQSLSTP 521
Query: 509 NGLPS------LARVG----SIGKQFGHYEPNLSLDEMKFGNQHPSFHPHSLPEYHDSLA 558
G+ S A +G S+G+ GH N S M + HPHSLPE H+ +
Sbjct: 522 IGISSGATHSNQAALGEISQSLGRMNGHM--NYSFQGMS------ALHPHSLPEVHNGVN 573
Query: 559 NGLPYNSPSTIADIASSVGTKIKDGLDSRHIRGVSS---NGHLMEPTGGVFGSPRNGSYS 615
NG+PYN +++A + + ++ + +D+RH+ V S NGH + G G R+GS S
Sbjct: 574 NGVPYNL-NSMAQVVNGTNSRTAEAVDNRHLHKVGSGNLNGHSFDRAEGALGFSRSGSSS 632
Query: 616 LHGNPYVWNNSNSHQQHPSSPMVWPNSPSFLNGLHANRVAHMPGFPRVPPL-MLNATSPA 674
+ G+ +WNNS++ HP+SP++WP+ SF+N + + A M G PR P M++ P
Sbjct: 633 VRGHQLMWNNSSNFHHHPNSPVLWPSPGSFVNNVPSRSPAQMHGVPRAPSSHMIDNVLPM 692
Query: 675 HH-HIGSAPAVNPSLWDRQHAYAGESPETSNFHLGSLGSGGFLGRSPSHHVDIASQNILS 733
HH H+GSAPA+NPSLWDR+H YAGE E NFH GS+GS GF G H +++ NI
Sbjct: 693 HHLHVGSAPAINPSLWDRRHGYAGELTEAPNFHPGSVGSMGFPGSPQLHSMEL--NNIYP 750
Query: 734 HVGGNCMDMT---KNVGMRSPQQICHLFPGRNPMMSMQTSFDSSNERMRNLSYRRNESNS 790
GGNCMD T +G SPQQ +F GRNPM+ + SFDS ERMR+ RRN+SN
Sbjct: 751 QTGGNCMDPTVSPAQIGGPSPQQRGSMFHGRNPMVPL-PSFDSPGERMRS---RRNDSNG 806
Query: 791 NHAD-KKQYELDIDRILRGDDSRTTLMIKNIPNKYTSKMLLAAIDEHCRGTYDFIYLPID 849
N +D KKQYELD+DRI+RGDDSRTTLMIKNIPNKYTSKMLLAAIDE+ +GTYDFIYLPID
Sbjct: 807 NQSDNKKQYELDVDRIVRGDDSRTTLMIKNIPNKYTSKMLLAAIDENHKGTYDFIYLPID 866
Query: 850 FKNKCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQN 909
FKNKCNVGYAFINM +P+ IIPF+Q FNGKKWEKFNSEKVASLAYARIQGK+ALIAHFQN
Sbjct: 867 FKNKCNVGYAFINMTNPQHIIPFYQTFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQN 926
Query: 910 SSLMNEDKRCRPILFHTDGPNAGDPEPFPMGTNIRSRLGKPRINGNEESQRQGFTSVSGN 969
SSLMNEDKRCRPILFH+DGPNAGD EPFPMGTNIR+R G+ R + EES Q + S N
Sbjct: 927 SSLMNEDKRCRPILFHSDGPNAGDQEPFPMGTNIRARSGRSRASSGEESH-QDISITSVN 985
Query: 970 GEESPNGSDSSGSSK 984
+ S NG D++G +K
Sbjct: 986 CDTSTNGVDTTGPAK 1000
>sp|Q8W4I9|AML1_ARATH Protein MEI2-like 1 OS=Arabidopsis thaliana GN=ML1 PE=1 SV=1
Length = 915
Score = 857 bits (2214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/983 (51%), Positives = 655/983 (66%), Gaps = 79/983 (8%)
Query: 1 MPFEIMDHRSGSAPTHFSEEIRFPAERQIGFWKPNTMSDQQGSDGTVPMLGGKFVASSPM 60
MP +IM+ R S P+HF E+I +ERQ GF K + M + QG
Sbjct: 1 MPSDIMEQRGVSTPSHFHEDIHITSERQFGFMKTDMMPENQG------------------ 42
Query: 61 ENFSPVGIPSVDWLELQQSTLARDKMKRLGIVGEEGAANLSENSWNSVNHHPKSWSNLAV 120
RD++ +++ ++SW S ++ K S+ +
Sbjct: 43 ---------------------GRDRL-----------SSMPKSSWTSESYQLKPQSSFSG 70
Query: 121 QPGINSLSGNRSGINGIQSESSLFSSSLSDIFTRKMKLSGNEILSRQPLNAVASHHQPEE 180
S + R+ NG Q ESSLFSSS+SD+F+RK++L G+++LS N V +H + EE
Sbjct: 71 SHPSGSPNA-RNTTNGSQWESSLFSSSMSDLFSRKLRLQGSDMLSTMSANTVVTH-REEE 128
Query: 181 PFESLKEIEAQTIGNLLPDEDDLFSGVTDDMGHNFQANTVDDLEDFDLFSSGGGMELEGD 240
P ESL+EIEAQTIGNLLPDEDDLF+ VT ++G +ANT D+L++FDLFSS GGMEL+GD
Sbjct: 129 PSESLEEIEAQTIGNLLPDEDDLFAEVTGEVGRKSRANTGDELDEFDLFSSVGGMELDGD 188
Query: 241 DRLFAVQKNSDFVGGVSNQGVSAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQ 300
+N + G S VGE GE PSRTL V NI+SNVED ELK LFEQ
Sbjct: 189 IFSSVSHRNGERGGNNS---------VGELNRGEIPSRTLLVGNISSNVEDYELKVLFEQ 239
Query: 301 FGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDA 360
FGDI+ ++TACK+RGF+M+SY DIRAA+NA +ALQNK LR KLDI YSI K+NPS+KD
Sbjct: 240 FGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDT 299
Query: 361 NQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLN 420
++G L+V NLDSS+S +EL+++ YGE++EIR T H ++ +IEF+D+RAA AL LN
Sbjct: 300 SKGALLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLN 359
Query: 421 RSDVAGKQIKLEASRPGGARRFMVQSEQEQDDLNLCQIPFDDLSSGQMVS--SGVITSTC 478
+VAGK+++L + P G R + Q + L + + + SSG + G+I+ST
Sbjct: 360 GLEVAGKKLQLVPTYPEGTR-YTSQCAANDTEGCLPKTSYSNTSSGHIGRHFPGMISSTS 418
Query: 479 MDNGSIQVLHSATRSPAIALTESHQTSSVPNGLPSLARVGSIGKQFGHYEPNLSLDEMKF 538
D GS++V+H++ SP + E H++ S+P G P A S K G E D
Sbjct: 419 SDGGSMRVIHNSIGSPVNSFIERHRSLSIPIGFPPSANGISASKPVGLQEHGHHFDNSNM 478
Query: 539 GNQH-PSFHPHSLPEYHDSLANGLPYNSPSTIADIASSVGTKIKDGLDSRHIRGVSSNGH 597
G Q P+ HPHS EY D+ ANG PY S S +++ S G+K +G ++RGV
Sbjct: 479 GIQSMPNLHPHSFSEYVDNFANGSPYTS-SAFSEMVSD-GSKANEGFMIHNVRGVEGF-- 534
Query: 598 LMEPTGGVFGSPRNGSYSLHGNPYVWNNSNSHQQHPSSPMVWPNSPSFLNGLHANRVAHM 657
+GG GSP + S N +W+NSN+ QQ+PSS M+WPNSPS +N + R +
Sbjct: 535 ----SGGGIGSPMHQSSRRPIN--LWSNSNTQQQNPSSGMMWPNSPSHINSIPTQRPP-V 587
Query: 658 PGFPRVPPLMLN-ATSPAHHHIGSAPAVNPSLWDRQHAYAGESPETSNFHLGSLGSGGFL 716
F R PP+M+N A+SP HHHIGSAP +N WDR+ AY ES E+S FH+GS GS G
Sbjct: 588 TVFSRAPPIMVNMASSPVHHHIGSAPVLNSPFWDRRQAYVAESLESSGFHIGSHGSMGIP 647
Query: 717 GRSPSHHVDIASQNILSHVGGNCMDM-TKNVGMRSPQQICHLFPGRNPMMSMQTSFDSSN 775
G SPSH +DI S S VGGN MD+ ++N +RSPQQ+ HLFPGR+PM SM SFDS N
Sbjct: 648 GSSPSHPMDIGSHKTFS-VGGNRMDVNSQNAVLRSPQQLSHLFPGRSPMGSMPGSFDSPN 706
Query: 776 ERMRNLSYRRNESNSNHADKKQYELDIDRILRGDDSRTTLMIKNIPNKYTSKMLLAAIDE 835
ER RNLS+RR+ES+S++ADKK YELD+DRILRG+D RTTLMIKNIPNKYTSKMLL+AIDE
Sbjct: 707 ERYRNLSHRRSESSSSNADKKLYELDVDRILRGEDRRTTLMIKNIPNKYTSKMLLSAIDE 766
Query: 836 HCRGTYDFIYLPIDFKNKCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYA 895
HC+GTYDF+YLPIDFKNKCNVGYAFIN+I+P +I+PF +AFNGKKWEKFNSEKVA+L YA
Sbjct: 767 HCKGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKFNSEKVATLTYA 826
Query: 896 RIQGKAALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPMGTNIRSRLGKPRINGN 955
RIQGK ALIAHFQNSSLMNEDKRCRPILFHTDGPNAGD EPFPMG+NIRSR GKPR +
Sbjct: 827 RIQGKTALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDQEPFPMGSNIRSRPGKPRSSSI 886
Query: 956 EESQRQGFTSVSGNGEESPNGSD 978
+ +SVS N EE+PNG+D
Sbjct: 887 DNYNSFSISSVSENREETPNGTD 909
>sp|Q9LYN7|AML4_ARATH Protein MEI2-like 4 OS=Arabidopsis thaliana GN=ML4 PE=1 SV=1
Length = 907
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/986 (51%), Positives = 650/986 (65%), Gaps = 87/986 (8%)
Query: 1 MPFEIMDHRSGSAPTHFSEEIRFPAERQIGFWKPNTMSDQQGSDGTVPMLGGKFVASSPM 60
MP +I++ R P+HF E+IR E+Q GF K N M
Sbjct: 1 MPSDILEPRGVPTPSHFHEDIRITPEKQFGFMKNNPM----------------------- 37
Query: 61 ENFSPVGIPSVDWLELQQSTLARDKMKRLGIVGEEGAANLSENSWNSVNHHPKSWSNLA- 119
P G G + ++NL +SW S ++ S+L+
Sbjct: 38 ----PEG-------------------------GVDRSSNLPTSSWTSDSYQLSQQSSLSG 68
Query: 120 VQPGINSLSGNRSGINGIQSESSLFSSSLSDIFTRKMKLSGNEILSRQPLNAVASHHQPE 179
P + R+ N ESSLFSSSLSD+F+RK++L ++ L A S ++ E
Sbjct: 69 ALPSF--IPNGRTTTNDTHWESSLFSSSLSDLFSRKLRLPRSDKL------AFMSANREE 120
Query: 180 EPFESLKEIEAQTIGNLLPDEDDLFSGVTDDMGHNFQANTVDDLEDFDLFSSGGGMELEG 239
EP ESL+E+EAQTIGNLLPDEDDLF+ V + H +AN DDL+D DLFSS GGMEL+G
Sbjct: 121 EPSESLEEMEAQTIGNLLPDEDDLFAEVVGEGVHKSRANGGDDLDDCDLFSSVGGMELDG 180
Query: 240 DDRLFAVQKNSDFVGGVSNQGVSAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFE 299
D +F+ D G S S V EHP GE SR LFVRN++S++ED EL LF+
Sbjct: 181 D--VFSSVSQRDGKRG------SNVSTVAEHPQGEILSRILFVRNVDSSIEDCELGVLFK 232
Query: 300 QFGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKD 359
QFGD+R ++TA K+RGF+M+SYYDIRAA+ A +AL + LR RKLDI YSIPK+NP E +
Sbjct: 233 QFGDVRALHTAGKNRGFIMVSYYDIRAAQKAARALHGRLLRGRKLDIRYSIPKENPKE-N 291
Query: 360 ANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTL 419
+++G L V NLDSS+S EELH IF YGEIRE+R T H+++ +IEF+D+R A+ AL+ L
Sbjct: 292 SSEGALWVNNLDSSISNEELHGIFSSYGEIREVRRTMHENSQVYIEFFDVRKAKVALQGL 351
Query: 420 NRSDVAGKQIKLEASRPGGARRFMVQSEQEQDDLNLCQIPFDDLSSGQMVS--SGVITST 477
N +VAG+Q+KL + P G F Q + + L ++ F++LSS M G++ ST
Sbjct: 352 NGLEVAGRQLKLAPTCPEGTS-FWPQFASDDGEGGLPKMAFNNLSSAHMGRHFPGILAST 410
Query: 478 CMDNGSIQVLHSATRSPAIALTESHQTSSVPNGLPSLARVGSIGKQFGHYEPNLSLDEMK 537
+D GSI+ +H++ SP + E HQ+ VP GLP ARV S K G E D K
Sbjct: 411 SIDGGSIRGMHNSVGSPMNSFIERHQSLDVPIGLPPSARVISASKPVGLQEFGNPFDNSK 470
Query: 538 FGNQH-PSFHPHSLPEYHDSLANGLPYNSPSTIADIASSVGTKIKDGLDSRHIRGVSSNG 596
G Q P+ HPH P+Y D+ A+G PY S +T +++ S G K +G ++RGV +G
Sbjct: 471 TGIQSMPNLHPH-FPDYLDNFASGSPYKSSTTFSEMVSD-GQKANEGFMMSNVRGVGVDG 528
Query: 597 HLMEPTGGVFGSPRN-GSYSLHGNPYVWNNSNSHQQHPSSPMVWPNSPSFLNGLHANRVA 655
GGV GSP N GS+ GN +W+NSNS Q + SS M+WPNSPS +NG+ + R+
Sbjct: 529 F----NGGVIGSPINQGSH--RGNLNLWSNSNSQQHNQSSGMMWPNSPSRVNGVPSQRIP 582
Query: 656 HMPGFPRVPPLMLN-ATSPAHHHIGSAPAVNPSLWDRQHAYAGESPETSNFHLGSLGSGG 714
+ F R PLM+N A+SP HHHIGSAP +N WDR+ AY ESPE+S FHLGS GS G
Sbjct: 583 PVTAFSRASPLMVNMASSPVHHHIGSAPVLNSPFWDRRQAYVAESPESSGFHLGSPGSMG 642
Query: 715 FLGRSPSHHVDIASQNILSHVGGNCMDM-TKNVGMRSPQQICHLFPGRNPMMSMQTSFDS 773
F G SPSH +D S + SHVGGN M+ +KN +RS +Q+ HLF GR+PM+S+ SFD
Sbjct: 643 FPGSSPSHPMDFGSHKVFSHVGGNRMEANSKNAVLRSSRQMPHLFTGRSPMLSVSGSFDL 702
Query: 774 SNERMRNLSYRRNESNSNHADKKQYELDIDRILRGDDSRTTLMIKNIPNKYTSKMLLAAI 833
NER RNLS+RR+ESNS++A+KK YELD+DRILRG+DSRTTLMIKNIPNKYTSKMLLAAI
Sbjct: 703 PNERYRNLSHRRSESNSSNAEKKLYELDVDRILRGEDSRTTLMIKNIPNKYTSKMLLAAI 762
Query: 834 DEHCRGTYDFIYLPIDFKNKCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLA 893
DE+C+GTYDF+YLPIDFKNKCNVGYAFIN+I+P I+PF++AFNGKKWEKFNSEKVASLA
Sbjct: 763 DEYCKGTYDFLYLPIDFKNKCNVGYAFINLIEPENIVPFYKAFNGKKWEKFNSEKVASLA 822
Query: 894 YARIQGKAALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPMGTNIRSRLGKPRIN 953
Y RIQGK+ALIAHFQNSSLMNEDKRCRPILFHT GPNAGD EPFPMG+NIRSR GK R N
Sbjct: 823 YGRIQGKSALIAHFQNSSLMNEDKRCRPILFHTAGPNAGDQEPFPMGSNIRSRPGKHRTN 882
Query: 954 GNEESQRQGFTSVSGNGEESPNGSDS 979
E F+S S N +E NG+DS
Sbjct: 883 SIE--NYTNFSSSSDNRDEPANGNDS 906
>sp|Q6ZI17|OML2_ORYSJ Protein MEI2-like 2 OS=Oryza sativa subsp. japonica GN=ML2 PE=2
SV=1
Length = 848
Score = 618 bits (1594), Expect = e-176, Method: Compositional matrix adjust.
Identities = 382/788 (48%), Positives = 496/788 (62%), Gaps = 108/788 (13%)
Query: 187 EIEAQTIGNLLPDEDDLFSGVTDDMGHNFQANTVDDLEDFDLFSSGGGMELEGD--DRLF 244
+ + + I +LLP+EDDLF+G+T+++ Q N++++LE+FD+F SGGGMEL+ D + +
Sbjct: 97 DFDLRQIDDLLPNEDDLFAGITNEIEPAGQTNSMEELEEFDVFGSGGGMELDTDPVESIT 156
Query: 245 AVQKNSDFVGGVSNQGV-------SAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKAL 297
A N+ G+ GV SA +V GEHPYGEHPSRTLFVRNINSNV+D+EL++L
Sbjct: 157 AGLGNTSIADGLRGNGVNHFGPSNSASTVAGEHPYGEHPSRTLFVRNINSNVDDTELRSL 216
Query: 298 FEQFGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSE 357
FEQ+GDIRT+YTA KHRGFVMISY+DIRAAR AM+ LQNKPLRRRKLDIH+SIPK+NPS+
Sbjct: 217 FEQYGDIRTLYTATKHRGFVMISYFDIRAARGAMRGLQNKPLRRRKLDIHFSIPKENPSD 276
Query: 358 KDANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALR 417
KD NQGTLV+FNLD SVS EE+ QIFG YGE++EIR+T +K +HKFIEFYD+RAAE ALR
Sbjct: 277 KDLNQGTLVIFNLDPSVSNEEVRQIFGTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALR 336
Query: 418 TLNRSDVAGKQIKLEASRPGGARRFMVQS---EQEQDDLNLCQIPFDDLSSGQMVSSG-- 472
+LN+S++AGK+IKLE SRPGG RR ++Q + +QD+ +IP G ++S
Sbjct: 337 SLNKSEIAGKRIKLEPSRPGGTRRNLMQQLGHDIDQDEPRSYRIP----HVGSPIASSPP 392
Query: 473 ---VITSTCMDNGSIQVLHSATRSPAIALTESHQTSSVPNGLP-----SLARVGSIGKQF 524
S+ DN +Q +++ ++ P G+P + ++ IGK
Sbjct: 393 GAWAQYSSPTDNNLLQAFNASPTGNGMS----------PIGMPPSLISNAVKIAPIGK-- 440
Query: 525 GHYEPNLSLDEMKFGNQHPSFHPHSLPEYHDSLANGLPYNSPSTIADIASSVGTKIKDGL 584
+ N S + F N + PH G + + D
Sbjct: 441 ---DSNWSKYDKVFSNNN---QPH-----------GAAFQHSHSYQD------------H 471
Query: 585 DSRHIRGVSSNGHLMEPTGGVFGSPRNGSYSLHGNPYVWNNSNSHQQHPSSPMVWPNSPS 644
S H+ SS G L P ++GSP+ YS H +W PS N+ S
Sbjct: 472 KSEHMS--SSPGTLTGPE-FLWGSPK--PYSEHAQSPIWRPPAIGHAIPS------NTRS 520
Query: 645 FLNG-LHANRVAHMPGFPRVPPLMLNATSPAHH-HIGSAPAVNPSLWDRQHAYAGESPET 702
G L+ R A + G + HH H+GSAP+ P ++ + ESPET
Sbjct: 521 QGQGLLYGGRQASLFG----------SQDQLHHHHVGSAPSGAP--FESHFGFLPESPET 568
Query: 703 SNF------HLGSLGSGGFLGRSPSHHVDIASQNILSHVGGNCMDMTKNV--GMRSPQQI 754
S ++G++GSG + AS N +S + GN D + + SP ++
Sbjct: 569 SYMNQVRFGNIGNIGSGRNGTGLMLNMAARASVNPVSALSGNMSDNNSSSFRPILSP-RL 627
Query: 755 CHLFPGRNPMMSMQTSF--DSSNERMRNLSYRRNESNSNHAD-KKQYELDIDRILRGDDS 811
F G NP SF D+S ER RN RR +S+ AD KKQY+LD+++I +GDD+
Sbjct: 628 GQSFYG-NPTYQGPGSFGLDNSIERGRN---RRVDSSVFQADSKKQYQLDLEKIRKGDDT 683
Query: 812 RTTLMIKNIPNKYTSKMLLAAIDEHCRGTYDFIYLPIDFKNKCNVGYAFINMIDPRQIIP 871
RTTLMIKNIPNKYTSKMLLAAIDE +GTYDF YLPIDFKNKCNVGYAFINMI P I+
Sbjct: 684 RTTLMIKNIPNKYTSKMLLAAIDEFHKGTYDFFYLPIDFKNKCNVGYAFINMISPVHIVS 743
Query: 872 FHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLMNEDKRCRPILFHTDGPNA 931
F+QAFNGKKWEKFNSEKVASLAYARIQG+ ALI+HFQNSSLMNEDKRCRPILFH++GP+A
Sbjct: 744 FYQAFNGKKWEKFNSEKVASLAYARIQGRTALISHFQNSSLMNEDKRCRPILFHSNGPDA 803
Query: 932 GDPEPFPM 939
G+ EPFP+
Sbjct: 804 GNQEPFPI 811
>sp|Q75M35|OML3_ORYSJ Protein MEI2-like 3 OS=Oryza sativa subsp. japonica GN=ML3 PE=2
SV=2
Length = 955
Score = 615 bits (1587), Expect = e-175, Method: Compositional matrix adjust.
Identities = 406/962 (42%), Positives = 546/962 (56%), Gaps = 111/962 (11%)
Query: 24 PAERQIGFWKPNTMSDQQGSDGTVPMLGGKFVASSPMENFSPVGIPSVDWLELQ--QSTL 81
P ERQ+GFW +M D +GS K V +SP+E P G E Q+
Sbjct: 34 PTERQVGFWNSESMVDHKGS---------KSVFASPLEKIQPNGANHAGDPETPGGQAFK 84
Query: 82 ARDKMKRLGIVGEEGAANLSENSWNSVNHHPKSWSNLA------VQPGI--NSLSGNRSG 133
D + ++ +E A+ SW + +P S L+ V+P + G G
Sbjct: 85 GLDILSLSNLMRQENASGSPSLSWGEILTNPISRLGLSTRETAFVEPTTADQHVPGYGKG 144
Query: 134 INGIQSESSLFSSSLSDIFTRKMKLSGNEILSRQPLNAVASH---HQPEEPFESLKEIEA 190
++ SSSLS++F+ K + EI+S + +H + +EP ES++ IEA
Sbjct: 145 LS---------SSSLSEVFSGKSR----EIVSGVLCQSTGTHTSIYDSDEPLESMEAIEA 191
Query: 191 QTIG-NLLPDEDDLFSGVTDDMGHNFQANTVDDLEDFDLFSSGGGMELEGDDRLFAVQKN 249
QTIG L D+DDL SG+ D + DD D D+F +GGGMELE +D + K
Sbjct: 192 QTIGDLLPDDDDDLISGIADGFEFTGMSTNQDD-ADEDIFCTGGGMELENNDSV----KG 246
Query: 250 SDFVGGVSNQGVSAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYT 309
G +S+G H + PSRTL VRNI +N+EDS+L LF+Q+GDIR +YT
Sbjct: 247 DKVQDGSFKSQISSG-----HSINKQPSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYT 301
Query: 310 ACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFN 369
+ KH GFV +SYYDIRAA+NAM+AL +KPL KLD+ +S PK+N KD ++G LVV N
Sbjct: 302 SFKHHGFVTVSYYDIRAAQNAMRALHSKPLGLMKLDVQFSFPKENVPGKDIDKGMLVVSN 361
Query: 370 LDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
+DSS+S ++L Q+ +YG+++EI + KF+EFYD+RAAE AL LN+ ++G +
Sbjct: 362 IDSSISNDDLLQMLSVYGDVKEISSSPISCTKKFVEFYDVRAAEEALHDLNKGGISGPKF 421
Query: 430 KLEASRPGGARRFMVQS---EQEQDDLNLCQIPFDDLSSGQMVSSGVITSTCMDNGSIQV 486
K+E S+ G A + Q E +QD L P +S + G + + C DN ++
Sbjct: 422 KVELSQHGEAGSCLRQQHSREWKQDSL-----PHQPKNSSPG-TIGKLGTKCQDNSTVHN 475
Query: 487 LHSATRSPAIALTESHQTSSVPNGLPSLARVGSI---GKQFGHYEPNLSLDEMKFGNQHP 543
L S + T+ T+ P L S R+ S Q + + L + FG
Sbjct: 476 LFSPVNQQLESPTQCISTTG-PQILSSPIRIKSTLQHNNQASVGDLSGPLGQGNFGRGIQ 534
Query: 544 SFHPHSLPEYHDSLANGLPYNSPSTIADIASSVGTKIKDGLDS--RHIRGVSSNGHLMEP 601
+ HP SLPE+H+ + N NS S ++ + +DG+D + + GH +
Sbjct: 535 TLHPRSLPEHHNRICN----NSKSMT--VSGRNASSRQDGVDHNIQKVGPAGFCGHSFDQ 588
Query: 602 TGGVFGSPRNGSYSLHGNPYVWNNSNSHQQHPSSPMVWPNSPSFLNGLHANRVAHMPGFP 661
FG GS LHG Y WN++N Q PS+P++W N H+ +P
Sbjct: 589 NNEAFGFTEIGSCPLHGYHYTWNHTNVFPQSPSAPILWSN---------LQHPMHVHSYP 639
Query: 662 RVPPLMLNATSPA--HHHIGSAPAVNPSLWDRQHAYAGESPETSNFHLGSLGSGGFLGRS 719
VPP MLN S HH+GSAP G +FH GSLGS G G
Sbjct: 640 GVPPHMLNTGSYPMDQHHLGSAP-----------DNGGSFGNVHSFHPGSLGSIGLHGSP 688
Query: 720 ---PSHHVDIAS------QNILSHVGGNCMDMTKNVGMRSPQQICHLFPGRNPMMSMQTS 770
PS AS + + S VGG G +S QQ+C+ GRNPM+ + TS
Sbjct: 689 QLYPSELSAFASSRGNFREALFSPVGG---------GFQSLQQMCNAINGRNPMIHVSTS 739
Query: 771 FDSSNERMRNLSYRRNESNSNHAD-KKQYELDIDRILRGDDSRTTLMIKNIPNKYTSKML 829
+D++N+RMR+ RR++ N ++ K+Q+ELDIDRI +G+DSRTTLMIKNIPNKY K+L
Sbjct: 740 YDATNDRMRS---RRHDGNPAQSENKRQFELDIDRIAKGEDSRTTLMIKNIPNKYNCKLL 796
Query: 830 LAAIDEHCRGTYDFIYLPIDFKNKCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKV 889
LA IDE+ RGTYDFIYLPIDFKNKCNVGYAFINM DP+ IIPF++ FNGKKWEKFNSEKV
Sbjct: 797 LAVIDENHRGTYDFIYLPIDFKNKCNVGYAFINMTDPQHIIPFYKTFNGKKWEKFNSEKV 856
Query: 890 ASLAYARIQGKAALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDPEPFPMGTNIRSRLGK 949
ASLAYARIQG++ALIAHFQNSSLMNEDK CRP+LFH DGPNAGD EPFP+G N+RSR G+
Sbjct: 857 ASLAYARIQGRSALIAHFQNSSLMNEDKWCRPMLFHKDGPNAGDQEPFPVGNNVRSRAGR 916
Query: 950 PR 951
R
Sbjct: 917 NR 918
>sp|Q6EQX3|OML5_ORYSJ Protein MEI2-like 5 OS=Oryza sativa subsp. japonica GN=ML5 PE=2
SV=1
Length = 811
Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust.
Identities = 362/824 (43%), Positives = 477/824 (57%), Gaps = 110/824 (13%)
Query: 134 INGIQSESSLFSSSLSDIFTRKMKLSGNEI-LSRQPLNAV-ASHHQP---EEPFESLKEI 188
+NG S++ LFSSSL + + KL G E + QP + + QP + + ++
Sbjct: 38 VNG-SSDAVLFSSSLPSVL-QFGKLPGKEREYNAQPKDDMFPMMKQPGTNARVADPMDDV 95
Query: 189 EAQTIGNLLPDEDDLFSGVTDDMGHNFQANTVDDLEDFDLFSSGGGMELEGD---DRLFA 245
IGNLLPD+++L +GV +D H V++ E++D+F + GGMEL+ D F
Sbjct: 96 AQHLIGNLLPDDEELLAGVIEDFDHVKLRTQVEESEEYDVFRNSGGMELDIDPLESITFG 155
Query: 246 VQKNS--DFVGGVSNQGV---SAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQ 300
K S + G +NQ AG+V GEHPYGEHPSRTLFVRNINSNVEDSEL++LFE
Sbjct: 156 TAKASLVNGTGSSTNQYSIQNGAGTVTGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEP 215
Query: 301 FGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDA 360
FGDIR++YTA KHRGFVMISYYDIR ARNA ALQ+KPLRRRKLDIHYSIPK+NPS+KD
Sbjct: 216 FGDIRSMYTATKHRGFVMISYYDIRHARNAKTALQSKPLRRRKLDIHYSIPKENPSDKDM 275
Query: 361 NQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLN 420
NQGTLV+FNL+ +VS EEL QIFG +GE+REIR+T HK +H+FIEFYD+RAAE+ALR+LN
Sbjct: 276 NQGTLVIFNLEPAVSNEELLQIFGAFGEVREIRETPHKRHHRFIEFYDVRAAESALRSLN 335
Query: 421 RSDVAGKQIKLEASRPGGARRFMVQS-----EQEQDDLNLCQIPFDDLSSGQMVSSGVIT 475
+SD+AGK++KLE SRPGGARR +Q EQ++ N QI +S + S + +
Sbjct: 336 KSDIAGKRVKLEPSRPGGARRSFIQHFNHEFEQDETKHNSFQIGSPSANSPPSLWSQLGS 395
Query: 476 STCMDNGSIQVLHSATRSPAIALTESHQTSSVPNGLPSLARVGSIGKQFGHYEPNLSLDE 535
T D + L+ + ++ S+ S +G P + +GK Y N + D
Sbjct: 396 PT--DENKLNALNETAFNGGMSPLGSNHLSGFSSGYPPMK--SPVGK--SSYWNNRA-DN 448
Query: 536 MKFGNQHPSFH-PHSLPEYHDSLANGLPYNSPSTIADIASSVGTKIKDGLDSRHIRGVSS 594
+ G+ P+ H HS PE+H + + P S + + +S
Sbjct: 449 IFHGS--PTLHNSHSFPEHHGGIISASPLVSSAASSASTAS------------------- 487
Query: 595 NGHLMEPTGGVFGSPRNGSYSLHGNPYVWNNSNSHQQH--PSSPMVWPNSPSFLNGLHAN 652
G +L G ++W N+N+ + H PSS S S
Sbjct: 488 -----------------GFTALTGTSFLWGNNNNLRDHGQPSSIQSQALSNSLFPNNQPQ 530
Query: 653 RVAHMPGFPRVPPLMLNATSPAHHHIGSAPAVNPSLWDRQHAYAGESPETSNFHLGSLGS 712
R +++ + + + + ++GSAP+V P ++ Y +SP+TS G G
Sbjct: 531 RQSNL--YQNLRGSFGASEHFSQFNVGSAPSVFP--FESNFGYFSDSPDTSYMRQGKFGG 586
Query: 713 GGFLGRSPSHHVDIASQNILSHVGGNCMDMTKNVGMRSPQQICHLFPGRNPMMSMQ---T 769
G + V G+ M N G +P N + SMQ
Sbjct: 587 TG-----------------PTRVSGSLM---TNFGA---------YPRIN-VASMQNGSV 616
Query: 770 SFDSSNERMRNLSYRRNESNSNHADKKQYELDIDRILRGDDSRTTLMIKNIPNKYTSKML 829
F+ +R RN + S + QY+LD+++I+ G D+RTTLMIKNIPNKYTS ML
Sbjct: 617 GFEGLLDRGRNQTV--GNSGCQEDSRVQYQLDLEKIIAGKDTRTTLMIKNIPNKYTSNML 674
Query: 830 LAAIDEHCRGTYDFIYLPIDFKNKCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKV 889
L IDE GTYDF YLPIDFKNKCNVGYAFINM P I+ F +AF G+KWEKFNSEKV
Sbjct: 675 LEVIDETHEGTYDFFYLPIDFKNKCNVGYAFINMASPGYIVSFFKAFAGRKWEKFNSEKV 734
Query: 890 ASLAYARIQGKAALIAHFQNSSLMNEDKRCRPILF---HTDGPN 930
SLAYARIQGKAAL+ HFQNSSLMNEDKRCRP+LF HT+ N
Sbjct: 735 VSLAYARIQGKAALVNHFQNSSLMNEDKRCRPMLFDPKHTENNN 778
>sp|Q8VWF5|AML5_ARATH Protein MEI2-like 5 OS=Arabidopsis thaliana GN=ML5 PE=1 SV=1
Length = 800
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/337 (58%), Positives = 248/337 (73%), Gaps = 26/337 (7%)
Query: 139 SESSLFSSSLSDIFTR-KMKLSGN-EILSRQPLNAVASHHQPEEPFESLKEIEAQTIGNL 196
S+++LFSSSL +F R K++LS N + S AV+ ++ E S + E+ +IGNL
Sbjct: 26 SDATLFSSSLP-VFPRGKLQLSDNRDGFSLIDDTAVSRTNKFNE---SADDFESHSIGNL 81
Query: 197 LPDEDDLFSGVTDDMGHNFQANTVDDLEDFDLFSSGGGMELEGDDR------------LF 244
LPDE+DL +G+ DD+ + D +D+DLF SGGGMEL+ D R L
Sbjct: 82 LPDEEDLLTGMMDDL----DLGELPDADDYDLFGSGGGMELDADFRDNLSMSGPPRLSLS 137
Query: 245 AVQKNSDFVGGVSNQGVSAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQFGDI 304
++ N+ + N AG+V GEHPYGEHPSRTLFVRNINSNVEDSEL ALFEQ+GDI
Sbjct: 138 SLGGNAIPQFNIPN---GAGTVAGEHPYGEHPSRTLFVRNINSNVEDSELTALFEQYGDI 194
Query: 305 RTIYTACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGT 364
RT+YT CKHRGFVMISYYDIR+AR AM++LQNKPLRRRKLDIH+SIPKDNPSEKD NQGT
Sbjct: 195 RTLYTTCKHRGFVMISYYDIRSARMAMRSLQNKPLRRRKLDIHFSIPKDNPSEKDMNQGT 254
Query: 365 LVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDV 424
LVVFNLD S+S ++LH IFG +GEI+EIR+T HK +HKF+EFYD+R AE AL+ LNR ++
Sbjct: 255 LVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKRHHKFVEFYDVRGAEAALKALNRCEI 314
Query: 425 AGKQIKLEASRPGGARR-FMVQSEQEQDDLNLCQIPF 460
AGK+IK+E SRPGGARR M+Q Q+ ++ +L +P
Sbjct: 315 AGKRIKVEPSRPGGARRSLMLQLNQDLENDDLHYLPM 351
Score = 257 bits (656), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 164/353 (46%), Positives = 218/353 (61%), Gaps = 34/353 (9%)
Query: 584 LDSRHIRGVSSNGHLMEPTGGVFGSPRNGSYSLHGNPYVWNNSNSHQQHPSSPMVWPNSP 643
+D+++ +S +G L+ GG+ +L G+ ++W + N+ + SS + +S
Sbjct: 438 MDNKYTGNLSPSGPLISNGGGI--------ETLSGSEFLWGSPNARSEPSSSSVWSTSST 489
Query: 644 SFLNGLHANRVAHMPGFPRVPPLMLNATSPAHH-HIGSAPAVNPSLWDRQHAYAGESPET 702
N L + RV FP N + HH H+GSAP+ P ++ + ES +
Sbjct: 490 G--NPLFSTRVDRSVPFPHQ---HQNQSRSHHHFHVGSAPSGVP--LEKHFGFVPESSKD 542
Query: 703 SNFH--LGSLGSGGFLGRSPSHHVDIASQNILSHVGGNCMDMTKNVGMRSPQQICHLF-- 758
+ F +G G G S +A+ I++ G + + M S + +F
Sbjct: 543 ALFMNTVGLQGMSGMGLNGGSFSSKMANNGIINS-GSMAENGFSSYRMMSSPRFSPMFLS 601
Query: 759 ----PGRNPMMSMQTSFDSSNERMRNLSYRRNESNSNHAD-KKQYELDIDRILRGDDSRT 813
PGR + FDS E R RR E+NSN + +KQ++LD+++IL G+DSRT
Sbjct: 602 SGLNPGR-----FASGFDSLYENGRP---RRVENNSNQVESRKQFQLDLEKILNGEDSRT 653
Query: 814 TLMIKNIPNKYTSKMLLAAIDEHCRGTYDFIYLPIDFKNKCNVGYAFINMIDPRQIIPFH 873
TLMIKNIPNKYTSKMLLAAIDE +GTY+F+YLPIDFKNKCNVGYAFINM++P IIPF+
Sbjct: 654 TLMIKNIPNKYTSKMLLAAIDEKNQGTYNFLYLPIDFKNKCNVGYAFINMLNPELIIPFY 713
Query: 874 QAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLMNEDKRCRPILFHT 926
+AFNGKKWEKFNSEKVASLAYARIQGK+ALIAHFQNSSLMNED RCRPI+F T
Sbjct: 714 EAFNGKKWEKFNSEKVASLAYARIQGKSALIAHFQNSSLMNEDMRCRPIIFDT 766
>sp|Q9SVV9|AML3_ARATH Protein MEI2-like 3 OS=Arabidopsis thaliana GN=ML3 PE=2 SV=2
Length = 759
Score = 347 bits (889), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 182/317 (57%), Positives = 228/317 (71%), Gaps = 29/317 (9%)
Query: 163 ILSRQPLNAVASHHQPEEPFES------------LKEIEAQTIGNLLPD-EDDLFSGVTD 209
++ Q +N S+HQ + S L + ++ IGN+LPD E++LFSG+ D
Sbjct: 29 LIQHQNINPRDSYHQSVDEMASGLDHFSGGIGNMLDDGDSHPIGNMLPDDEEELFSGLMD 88
Query: 210 DMGHNFQANTVDDLEDFDLFSSGGGMELEGD---------DRLFAVQKNSDFV--GGVSN 258
D+ + T+DDLED+DLF SGGG+ELE D R+ N D V +
Sbjct: 89 DLNLSSLPATLDDLEDYDLFGSGGGLELETDPYDSLNKGFSRMGFADSNVDNVMPQNIFQ 148
Query: 259 QGVSAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRGFVM 318
GV GS+ GEHPYGEHPSRTLFVRNINSNVEDSEL+ALFEQ+G IRT+YTACK RGFVM
Sbjct: 149 NGV--GSIAGEHPYGEHPSRTLFVRNINSNVEDSELQALFEQYGHIRTLYTACKQRGFVM 206
Query: 319 ISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEE 378
+SY DIRA+R AM+ALQ K L++RKLDIH+SIPKDNPSEKD NQGTLVVFNL SVS +
Sbjct: 207 VSYNDIRASRAAMRALQGKLLKKRKLDIHFSIPKDNPSEKDVNQGTLVVFNLAPSVSNRD 266
Query: 379 LHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGG 438
L IFG+YGEI+EIR+T +K +HKF+EF+D+R+A+ AL+ LNR+++AGK+IKLE SRPGG
Sbjct: 267 LENIFGVYGEIKEIRETPNKRHHKFVEFFDVRSADAALKALNRTEIAGKRIKLEHSRPGG 326
Query: 439 ARRFM---VQSEQEQDD 452
ARR M + E EQDD
Sbjct: 327 ARRNMMLQMNPELEQDD 343
Score = 251 bits (640), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/311 (48%), Positives = 190/311 (61%), Gaps = 44/311 (14%)
Query: 615 SLHGNPYVWNNSNSHQQHPSSPMVWPNSPSFLNGLHANRVAHMPGFPRVPPLMLNATSPA 674
+L G+ ++W + PSS WP +N +NR H R P N +
Sbjct: 457 TLSGSEFLWGS-------PSSS-AWP-----VNPFSSNRENH-----RFPYSAQNGSLHQ 498
Query: 675 HHHIGSAPAVNPSLWDRQHAYAGESPETSNFHLGSLGSGGFLGRSPSHHVDIASQNILSH 734
HHIGSAP+ + SPETS S+GS F G S ++ +Q L
Sbjct: 499 LHHIGSAPS----------GFFPRSPETS-----SMGSVAFRGASG----NMNAQRNLRE 539
Query: 735 VGGNCMDMTKNVGMRSPQQICHLFPGRNPMMSMQTSFDSSNERMRNLSYRRNESNSNHAD 794
+ N M S + LF G + + S ++ + + S ++ +SN N AD
Sbjct: 540 TS------SPNFKMLSAPRRSQLFTGNGSYLWPAATMVSIDDPLEDGSNQQFDSNGNQAD 593
Query: 795 KK-QYELDIDRILRGDDSRTTLMIKNIPNKYTSKMLLAAIDEHCRGTYDFIYLPIDFKNK 853
K Q++LD+ +I+RG+D RTTLMIKNIPNKYT MLLAAIDE GTYDF+YLPIDFKNK
Sbjct: 594 IKIQFQLDLSKIMRGEDPRTTLMIKNIPNKYTRNMLLAAIDEKNSGTYDFLYLPIDFKNK 653
Query: 854 CNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLM 913
CNVGYAFINM+ P+ I ++AFNGKKW+KFNSEKVASLAYARIQGKAALIAHFQNSSLM
Sbjct: 654 CNVGYAFINMVSPKFTIALYEAFNGKKWDKFNSEKVASLAYARIQGKAALIAHFQNSSLM 713
Query: 914 NEDKRCRPILF 924
NED+RC+PI+F
Sbjct: 714 NEDRRCQPIVF 724
>sp|Q9SJG8|AML2_ARATH Protein MEI2-like 2 OS=Arabidopsis thaliana GN=ML2 PE=2 SV=2
Length = 843
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/143 (61%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
Query: 794 DKKQYELDIDRILRGDDSRTTLMIKNIPNKYTSKMLLAAIDEHCRGTYDFIYLPIDFKNK 853
D +Y +D+DRI GD+ RTTL+IKNIPNKYT KML+A IDE +G YDF+ LP DFKNK
Sbjct: 661 DGGRYHIDLDRIASGDEIRTTLIIKNIPNKYTYKMLVAEIDEKHKGDYDFLCLPTDFKNK 720
Query: 854 CNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLM 913
CN+G+AFINM+ P I+PF Q FNGK WEKFNS KVASLAYA IQGK+AL ++ Q S M
Sbjct: 721 CNMGHAFINMVSPLHIVPFQQTFNGKIWEKFNSGKVASLAYAEIQGKSALASYMQTPSSM 780
Query: 914 NEDKRCRP-ILFHTDGPNAGDPE 935
E K+ P + +H DG +A D E
Sbjct: 781 KEQKQLFPEVSYHDDGQDANDHE 803
>sp|P08965|MEI2_SCHPO Meiosis protein mei2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mei2 PE=1 SV=1
Length = 750
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 1/156 (0%)
Query: 792 HADKKQYELDIDRILRGDDSRTTLMIKNIPNKYTSKMLLAAIDEHCRGTYDFIYLPIDFK 851
HA + +D +I G D+RTT+MIKNIPNK+T +ML ID +GTYDF+YL IDF
Sbjct: 577 HASDRN-SVDYAQIASGIDTRTTVMIKNIPNKFTQQMLRDYIDVTNKGTYDFLYLRIDFV 635
Query: 852 NKCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSS 911
NKCNVGYAFIN I+P+ II F +A G +W F+SEK+ ++YA IQGK LI F+NS
Sbjct: 636 NKCNVGYAFINFIEPQSIITFGKARVGTQWNVFHSEKICDISYANIQGKDRLIEKFRNSC 695
Query: 912 LMNEDKRCRPILFHTDGPNAGDPEPFPMGTNIRSRL 947
+M+E+ RP +F + GPN G EPFP N R +L
Sbjct: 696 VMDENPAYRPKIFVSHGPNRGMEEPFPAPNNARRKL 731
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 275 HPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYT-ACKHRGFVMISYYDIRAARNAMKA 333
H SR LFV N+ V + L LF + GD++ I T + G +++++DIR A A K+
Sbjct: 192 HASRYLFVTNLPRIVPYATLLELFSKLGDVKGIDTSSLSTDGICIVAFFDIRQAIQAAKS 251
Query: 334 LQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLD------------SSVSTEELHQ 381
L+++ +L +++ + + +K NQG + F D S +S +L
Sbjct: 252 LRSQRFFNDRL-LYFQFCQRSSIQKMINQGATIQFLDDNEGQLLLNMQGGSVLSILQLQS 310
Query: 382 IFGIYGEIREIRDTQHKHNHKFI-EFYDIRAAETALRTLN 420
I +G + ++ + ++ + I EFYD R A AL L+
Sbjct: 311 ILQTFGPLLIMKPLRSQNVSQIICEFYDTRDASFALDELD 350
>sp|O65001|TE1_MAIZE Protein terminal ear1 OS=Zea mays GN=TE1 PE=2 SV=1
Length = 656
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 83/145 (57%), Gaps = 17/145 (11%)
Query: 810 DSRTTLMIKNIPNKYTSKMLLAAIDEHCR---------------GTYDFIYLPIDFKNKC 854
D+RTT+MI+NIPNKY+ K+LL +D HC YDF+YLPIDF NKC
Sbjct: 438 DTRTTVMIRNIPNKYSQKLLLNMLDNHCIQSNEWIVASGEEQPFSAYDFVYLPIDFNNKC 497
Query: 855 NVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSLMN 914
NVGY F+N+ P + ++AF+ + WE +NS K+ + YAR+QG AL HF+NS
Sbjct: 498 NVGYGFVNLTSPEARVRLYKAFHKQPWEVYNSRKICQVTYARVQGLEALKEHFKNSKFPC 557
Query: 915 EDKRCRPILFH--TDGPNAGDPEPF 937
+ P+ F DG DP P
Sbjct: 558 DSDEYLPVAFSPARDGKELTDPVPI 582
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 98/200 (49%), Gaps = 38/200 (19%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTI-YTACKHRGFVMISYYDIRAARNAMKALQ 335
SR + + + + +++++ FG IR++ A G + ++DIRAA A+ ++
Sbjct: 86 SRVVVLGLVPPHAQEADVAQAMAPFGAIRSVDACAVASEGVATVHFFDIRAAELALTCVR 145
Query: 336 NKPLRRR-KLDIHYSI--------------------PKDNP----------------SEK 358
+ +R++ +L Y+ P D+ ++
Sbjct: 146 EQHMRQQSRLGQLYAAAAVAPAWAPAPTPQAWDWPHPNDDGRGLVLGHAVWAHFATGADD 205
Query: 359 DANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRT 418
N+G+LVV + VS +L Q+F +G+++++R++ + +HKF++F+D R A AL
Sbjct: 206 GDNRGSLVVLSPLPGVSVADLRQVFQAFGDLKDVRESAQRPSHKFVDFFDTRDAARALAE 265
Query: 419 LNRSDVAGKQIKLEASRPGG 438
LN ++ G+++ +E +RP G
Sbjct: 266 LNGQELFGRRLVVEFTRPSG 285
>sp|A2WY46|EAR1_ORYSI Protein terminal ear1 homolog OS=Oryza sativa subsp. indica GN=PLA2
PE=2 SV=1
Length = 680
Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 85/147 (57%), Gaps = 19/147 (12%)
Query: 810 DSRTTLMIKNIPNKYTSKMLLAAIDEHC-----------------RGTYDFIYLPIDFKN 852
D+RTT+MI+NIPNKY+ K+LL +D HC +YDF+YLPIDF N
Sbjct: 452 DTRTTVMIRNIPNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDFNN 511
Query: 853 KCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSL 912
KCNVGY F+N+ P + ++AF+ + WE FNS K+ + YAR+QG AL HF+NS
Sbjct: 512 KCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFKNSKF 571
Query: 913 MNEDKRCRPILFH--TDGPNAGDPEPF 937
+ P++F DG +P P
Sbjct: 572 PCDSDEYLPVVFSPPRDGKLLTEPVPL 598
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 106/222 (47%), Gaps = 45/222 (20%)
Query: 261 VSAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQFGDIRTI-YTACKHRGFVMI 319
V A + V + P SR + + + + + E+ FG +R + +A G +
Sbjct: 85 VPAAATVVDGPA----SRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVATV 140
Query: 320 SYYDIRAARNAMKALQNKPLRRR-KLDIHY--------SIPKDNPSEKD----------- 359
++D+R+A +A+ ++ + +R++ +L Y S P P D
Sbjct: 141 YFFDLRSAEHAVTGVREQHIRQQCRLGQLYAAAAAAAASSPTWPPPAWDWPHDDNRGLVL 200
Query: 360 ------------------ANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNH 401
A++G+LVV N ++S EL +IF YG+++++R++ + ++
Sbjct: 201 GQAVWAHFAAASTVPDDGASRGSLVVLNSLPAMSVFELREIFQAYGDVKDVRESALRPSN 260
Query: 402 KFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPG--GARR 441
KF+EF+D R A+ AL LN ++ G+++ +E +RP G RR
Sbjct: 261 KFVEFFDTRDADRALHELNGKELFGRRLVVEYTRPSLPGPRR 302
>sp|Q0JGS5|EAR1_ORYSJ Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica
GN=PLA2 PE=2 SV=1
Length = 683
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 85/147 (57%), Gaps = 19/147 (12%)
Query: 810 DSRTTLMIKNIPNKYTSKMLLAAIDEHC-----------------RGTYDFIYLPIDFKN 852
D+RTT+MI+NIPNKY+ K+LL +D HC +YDF+YLPIDF N
Sbjct: 455 DTRTTVMIRNIPNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDFNN 514
Query: 853 KCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSSL 912
KCNVGY F+N+ P + ++AF+ + WE FNS K+ + YAR+QG AL HF+NS
Sbjct: 515 KCNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFKNSKF 574
Query: 913 MNEDKRCRPILFH--TDGPNAGDPEPF 937
+ P++F DG +P P
Sbjct: 575 PCDSDEYLPVVFSPPRDGKLLTEPVPL 601
Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 106/222 (47%), Gaps = 45/222 (20%)
Query: 261 VSAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQFGDIRTI-YTACKHRGFVMI 319
V A + V + P SR + + + + + E+ FG +R + +A G +
Sbjct: 85 VPAAATVVDGPA----SRAVVLSLVPPHAPEDEIARAMAPFGAVRAVDASAVASEGVATV 140
Query: 320 SYYDIRAARNAMKALQNKPLRRR-KLDIHY--------SIPKDNPSEKD----------- 359
++D+R+A +A+ ++ + +R++ +L Y S P P D
Sbjct: 141 YFFDLRSAEHAVTGVREQHIRQQCRLGQLYAAAAAAAASSPTWPPPAWDWPHDDNRGLVL 200
Query: 360 ------------------ANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNH 401
A++G+LVV N ++S EL +IF YG+++++R++ + ++
Sbjct: 201 GQAVWAHFAAASTVPDDGASRGSLVVLNSLPAMSVFELREIFQAYGDVKDVRESALRPSN 260
Query: 402 KFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPG--GARR 441
KF+EF+D R A+ AL LN ++ G+++ +E +RP G RR
Sbjct: 261 KFVEFFDTRDADRALHELNGKELFGRRLVVEYTRPSLPGPRR 302
>sp|Q652K6|OML6_ORYSJ Protein MEI2-like 6 OS=Oryza sativa subsp. japonica GN=ML6 PE=2
SV=1
Length = 323
Score = 85.1 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 21/144 (14%)
Query: 811 SRTTLMIKNIPNKYTSKMLLAAIDEHC-------------------RGTYDFIYLPIDFK 851
+ T+LMI+NIPNK+ L+A +D+HC + YDF Y+PIDFK
Sbjct: 168 TTTSLMIRNIPNKFLKARLMAILDQHCADENGKCHRRGGGGGRSVVKSEYDFFYVPIDFK 227
Query: 852 NKCNVGYAFINMIDPRQIIPFHQAFNGKKWEKFNSEKVASLAYARIQGKAALIAHFQNSS 911
N GYAF+NM +W+ S KV + A IQG A +AHF S
Sbjct: 228 TGFNKGYAFVNMTTATAARRLRAFLQDHRWDAAMSGKVCDVVPAAIQGLDAFVAHFSASC 287
Query: 912 LMNEDKRCRPILFHTDGPNAGDPE 935
K P+ F + P G+ +
Sbjct: 288 FPCRTKEFLPVWF--EPPRDGEQQ 309
>sp|Q6ET49|OML7_ORYSJ Protein MEI2-like 7 OS=Oryza sativa subsp. japonica GN=OML7 PE=2
SV=1
Length = 389
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 23/149 (15%)
Query: 813 TTLMIKNIPNKYTSKMLLAAIDEHC-------------RGTYDFIYLPIDF-----KNKC 854
TT+M++NIPNK T ++ +D+HC R YD +Y+ +DF +
Sbjct: 216 TTVMVRNIPNKLTRSDMVRLLDDHCARENRRRGRGGEPRAEYDLVYVRMDFGMCNKERSS 275
Query: 855 NVGYAFINMIDPRQIIPFHQAFNGKKWEK--FNSEKVASLAYARIQGKAALIAHFQNSSL 912
N+GYAF+N +A +G +W++ F+S K+ + ARIQGK AL+ HF ++
Sbjct: 276 NMGYAFVNFTTAEAARGLQRALHGCRWKRSAFDSGKIIDIRAARIQGKDALVRHFGRTTY 335
Query: 913 MNEDK-RCRPILFHT--DGPNAGDPEPFP 938
D P +F DG AG P P
Sbjct: 336 YECDTDEYLPAVFSPPRDGSTAGAGAPSP 364
>sp|P08199|NUCL_MESAU Nucleolin OS=Mesocricetus auratus GN=NCL PE=1 SV=2
Length = 714
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 19/187 (10%)
Query: 269 EHPYGE-----HPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRGFVMISYYD 323
E P G +RTL +N++ N+ + ELK +FE +IR + K +G I+Y +
Sbjct: 380 EKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQDGKSKG---IAYIE 436
Query: 324 IRAARNAMKALQNK---PLRRRKLDIHYSIPKDNPSEKDANQG-------TLVVFNLDSS 373
++ +A K L+ K + R + ++Y+ K E+ TLV+ NL S
Sbjct: 437 FKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYS 496
Query: 374 VSTEELHQIFGIYGEIREIRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLE 432
+ E L ++F I+ ++ Q K + FIEF A+ AL + N+ ++ G+ I+LE
Sbjct: 497 ATEETLQEVFEKATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE 556
Query: 433 ASRPGGA 439
P G+
Sbjct: 557 LQGPRGS 563
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 280 LFVRNINSNVEDSELK-ALFEQFG-------DIRTIYTACKHRGFVMISYYDIRAARNAM 331
LF+ N+N N +ELK A+ E F D+RT +R F Y D +A +
Sbjct: 310 LFIGNLNPNKSVAELKVAISEPFAKNDLAVVDVRT----GTNRKF---GYVDFESAEDLE 362
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
KAL+ L+ +I PK S+K TL+ NL +++ +EL ++F EIR
Sbjct: 363 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDALEIRL 422
Query: 392 IRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ +IEF AE L +++ G+ + L
Sbjct: 423 VSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 462
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTA-CKHRGFVMISYYDIRAARNAMKALQ 335
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 485 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCN 544
Query: 336 NKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIF--GIYGEIREIR 393
+ R + + P+ +P+ + TL V L + E L + F + I R
Sbjct: 545 KMEIEGRTIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDR 604
Query: 394 DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGG 438
+T F++F A+ A + ++ G ++ L+ ++P G
Sbjct: 605 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 649
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 275 HPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNA 330
PS+TLFV+ ++ + + LK FE G +R + +GF + + A+ A
Sbjct: 569 QPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAA 626
Query: 331 MKALQNKPLRRRKLDIHYSIPK 352
+A+++ + K+ + ++ PK
Sbjct: 627 KEAMEDGEIDGNKVTLDWAKPK 648
>sp|P13383|NUCL_RAT Nucleolin OS=Rattus norvegicus GN=Ncl PE=1 SV=3
Length = 713
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQN 336
+RTL +N++ N+ + ELK +FE +IR + + +G I+Y + ++ +A K L+
Sbjct: 396 ARTLLAKNLSFNITEDELKEVFEDAVEIRLVSQDGRSKG---IAYIEFKSEADAEKNLEE 452
Query: 337 K---PLRRRKLDIHYSIPKDNPSEKDANQG-------TLVVFNLDSSVSTEELHQIFGIY 386
K + R + ++Y+ K E+ TLV+ NL S + E L ++F
Sbjct: 453 KQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA 512
Query: 387 GEIREIRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGGA 439
I+ ++ K + FIEF A+ AL + N+ ++ G+ I+LE P G+
Sbjct: 513 TFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGPRGS 566
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 280 LFVRNINSNVEDSELK-ALFEQFG-------DIRTIYTACKHRGFVMISYYDIRAARNAM 331
LF+ N+N N +ELK A+ E F D+RT +R F Y D +A +
Sbjct: 313 LFIGNLNPNKSVAELKVAISELFAKNDLAAVDVRT----GTNRKF---GYVDFESAEDLE 365
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
KAL+ L+ +I PK S+K TL+ NL +++ +EL ++F EIR
Sbjct: 366 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDAVEIRL 425
Query: 392 IRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ +IEF AE L +++ G+ + L
Sbjct: 426 VSQDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 465
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTA-CKHRGFVMISYYDIRAARNAMKALQ 335
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 488 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCN 547
Query: 336 NKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIF--GIYGEIREIR 393
+ R + + P+ +P+ + TL V L + E L + F + I R
Sbjct: 548 KMEIEGRTIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDR 607
Query: 394 DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGG 438
+T F++F A+ A + ++ G ++ L+ ++P G
Sbjct: 608 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 652
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 275 HPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNA 330
PS+TLFV+ ++ + + LK FE G +R + +GF + + A+ A
Sbjct: 572 QPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAA 629
Query: 331 MKALQNKPLRRRKLDIHYSIPK 352
+A+++ + K+ + ++ PK
Sbjct: 630 KEAMEDGEIDGNKVTLDWAKPK 651
>sp|Q4R4J7|NUCL_MACFA Nucleolin OS=Macaca fascicularis GN=NCL PE=2 SV=3
Length = 711
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 26/191 (13%)
Query: 269 EHPYG-----EHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRGFVMISYYD 323
E P G E +RTL +N+ V ELK +FE +IR + K +G I +
Sbjct: 380 EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKT 439
Query: 324 IRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQ--------------GTLVVFN 369
A + Q + R + ++Y+ EK NQ TLV+ N
Sbjct: 440 EADAEKTFEEKQGTEIDGRSISLYYT------GEKGQNQDYRGGKNSTWSGESKTLVLSN 493
Query: 370 LDSSVSTEELHQIFGIYGEIREIRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQ 428
L S + E L ++F I+ ++ K + FIEF A+ AL + N+ ++ G+
Sbjct: 494 LSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRA 553
Query: 429 IKLEASRPGGA 439
I+LE P G+
Sbjct: 554 IRLELQGPRGS 564
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTA-CKHRGFVMISYYDIRAARNAMKALQ 335
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 486 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 545
Query: 336 NKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIF--GIYGEIREIR 393
+ + R + + P+ +P+ + TL V L + E L + F + I R
Sbjct: 546 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 605
Query: 394 DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGG 438
+T F++F A+ A + ++ G ++ L+ ++P G
Sbjct: 606 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 650
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 280 LFVRNINSNVEDSELKA-LFEQFG-------DIRTIYTACKHRGFVMISYYDIRAARNAM 331
LFV N+N N ELK + + F D+R T R F Y D +A +
Sbjct: 310 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 362
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
KAL+ L+ +I PK S+K+ + TL+ NL V+ +EL ++F EIR
Sbjct: 363 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 422
Query: 392 IRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ +IEF AE +++ G+ I L
Sbjct: 423 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 462
>sp|Q5RF26|NUCL_PONAB Nucleolin OS=Pongo abelii GN=NCL PE=2 SV=3
Length = 712
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 26/191 (13%)
Query: 269 EHPYG-----EHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRGFVMISYYD 323
E P G E +RTL +N+ V ELK +FE +IR + K +G I +
Sbjct: 381 EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKT 440
Query: 324 IRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQ--------------GTLVVFN 369
A + Q + R + ++Y+ EK NQ TLV+ N
Sbjct: 441 EADAEKTFEEKQGTEIDGRSISLYYT------GEKGQNQDYRGGKNSTWSGESKTLVLSN 494
Query: 370 LDSSVSTEELHQIFGIYGEIREIRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQ 428
L S + E L ++F I+ ++ K + FIEF A+ AL + N+ ++ G+
Sbjct: 495 LSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRA 554
Query: 429 IKLEASRPGGA 439
I+LE P G+
Sbjct: 555 IRLELQGPRGS 565
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTA-CKHRGFVMISYYDIRAARNAMKALQ 335
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 487 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 546
Query: 336 NKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIF--GIYGEIREIR 393
+ + R + + P+ +P+ + TL V L + E L + F + I R
Sbjct: 547 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 606
Query: 394 DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGG 438
+T F++F A+ A + ++ G ++ L+ ++P G
Sbjct: 607 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 651
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 280 LFVRNINSNVEDSELKA-LFEQFG-------DIRTIYTACKHRGFVMISYYDIRAARNAM 331
LFV N+N N ELK + + F D+R T R F Y D +A +
Sbjct: 311 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 363
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
KAL+ L+ +I PK S+K+ + TL+ NL V+ +EL ++F EIR
Sbjct: 364 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 423
Query: 392 IRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ +IEF AE +++ G+ I L
Sbjct: 424 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 463
>sp|P19338|NUCL_HUMAN Nucleolin OS=Homo sapiens GN=NCL PE=1 SV=3
Length = 710
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 26/191 (13%)
Query: 269 EHPYG-----EHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRGFVMISYYD 323
E P G E +RTL +N+ V ELK +FE +IR + K +G I +
Sbjct: 379 EKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRLVSKDGKSKGIAYIEFKT 438
Query: 324 IRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQ--------------GTLVVFN 369
A + Q + R + ++Y+ EK NQ TLV+ N
Sbjct: 439 EADAEKTFEEKQGTEIDGRSISLYYT------GEKGQNQDYRGGKNSTWSGESKTLVLSN 492
Query: 370 LDSSVSTEELHQIFGIYGEIREIRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQ 428
L S + E L ++F I+ ++ K + FIEF A+ AL + N+ ++ G+
Sbjct: 493 LSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRA 552
Query: 429 IKLEASRPGGA 439
I+LE P G+
Sbjct: 553 IRLELQGPRGS 563
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 73/165 (44%), Gaps = 3/165 (1%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTA-CKHRGFVMISYYDIRAARNAMKALQ 335
S+TL + N++ + + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 485 SKTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCN 544
Query: 336 NKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIF--GIYGEIREIR 393
+ + R + + P+ +P+ + TL V L + E L + F + I R
Sbjct: 545 KREIEGRAIRLELQGPRGSPNARSQPSKTLFVKGLSEDTTEETLKESFDGSVRARIVTDR 604
Query: 394 DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGG 438
+T F++F A+ A + ++ G ++ L+ ++P G
Sbjct: 605 ETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 649
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 280 LFVRNINSNVEDSELKA-LFEQFG-------DIRTIYTACKHRGFVMISYYDIRAARNAM 331
LFV N+N N ELK + + F D+R T R F Y D +A +
Sbjct: 309 LFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMT----RKF---GYVDFESAEDLE 361
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
KAL+ L+ +I PK S+K+ + TL+ NL V+ +EL ++F EIR
Sbjct: 362 KALELTGLKVFGNEIKLEKPKGKDSKKERDARTLLAKNLPYKVTQDELKEVFEDAAEIRL 421
Query: 392 IRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ +IEF AE +++ G+ I L
Sbjct: 422 VSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISL 461
>sp|P09405|NUCL_MOUSE Nucleolin OS=Mus musculus GN=Ncl PE=1 SV=2
Length = 707
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQN 336
+RTL +N++ N+ + ELK +FE +IR + K +G I+Y + ++ +A K L+
Sbjct: 394 ARTLLAKNLSFNITEDELKEVFEDAMEIRLVSQDGKSKG---IAYIEFKSEADAEKNLEE 450
Query: 337 K---PLRRRKLDIHYSIPKDNPSEKDANQG-------TLVVFNLDSSVSTEELHQIFGIY 386
K + R + ++Y+ K E+ TLV+ NL S + E L ++F
Sbjct: 451 KQGAEIDGRSVSLYYTGEKGQRQERTGKTSTWSGESKTLVLSNLSYSATKETLEEVFEKA 510
Query: 387 GEIREIRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLE 432
I+ ++ K + FIEF A+ AL + N+ ++ G+ I+LE
Sbjct: 511 TFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLE 557
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 280 LFVRNINSNVEDSELK-ALFEQFG-------DIRTIYTACKHRGFVMISYYDIRAARNAM 331
LF+ N+N N +ELK A+ E F D+RT +R F Y D +A +
Sbjct: 311 LFIGNLNPNKSVNELKFAISELFAKNDLAVVDVRT----GTNRKF---GYVDFESAEDLE 363
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
KAL+ L+ +I PK S+K TL+ NL +++ +EL ++F EIR
Sbjct: 364 KALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDAMEIRL 423
Query: 392 IRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ +IEF AE L +++ G+ + L
Sbjct: 424 VSQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSL 463
Score = 40.4 bits (93), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 11/167 (6%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTA-CKHRGFVMISYYDIRAARNAMKALQ 335
S+TL + N++ + L+ +FE+ I+ K +G+ I + A+ A+ +
Sbjct: 486 SKTLVLSNLSYSATKETLEEVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 336 NKPLRRR--KLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIF--GIYGEIRE 391
+ R +L++ S + PS+ TL V L + E L + F + I
Sbjct: 546 KMEIEGRTIRLELQGSNSRSQPSK------TLFVKGLSEDTTEETLKESFEGSVRARIVT 599
Query: 392 IRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGG 438
R+T F++F A+ A + ++ G ++ L+ ++P G
Sbjct: 600 DRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWAKPKG 646
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 275 HPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNA 330
PS+TLFV+ ++ + + LK FE G +R + +GF + + A+ A
Sbjct: 566 QPSKTLFVKGLSEDTTEETLKESFE--GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAA 623
Query: 331 MKALQNKPLRRRKLDIHYSIPK 352
+A+++ + K+ + ++ PK
Sbjct: 624 KEAMEDGEIDGNKVTLDWAKPK 645
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5
PE=1 SV=3
Length = 682
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 82/164 (50%), Gaps = 12/164 (7%)
Query: 275 HPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACK---HR--GFVMISYYDIRAARN 329
HP+ +L+V +++ +V +S L LF Q + + C+ HR G+ +++ + A
Sbjct: 56 HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRV-CRDLTHRSLGYAYVNFANPEDASR 114
Query: 330 AMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEI 389
AM++L P+R R + I S +PS + + +G + + NLD+S+ + L++ F +G I
Sbjct: 115 AMESLNYAPIRDRPIRIMLS--NRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTI 172
Query: 390 REIRDTQ----HKHNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
+ + F++F A+ A+ LN + KQ+
Sbjct: 173 LSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQV 216
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 273 GEHPSRT-LFVRNINSNVEDSELKALFEQFGDIRTIYT----ACKHRGFVMISYYDIRAA 327
G PS T ++V+N+ + D ELK F ++GDI + + R F +++ AA
Sbjct: 233 GAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAA 292
Query: 328 RNAMKALQNKPLRR-------------RKLDIHYSIPKDNPSEKDANQGT-LVVFNLDSS 373
A++ + L R+ ++ ++ S + QG+ L + NLD S
Sbjct: 293 AVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDS 352
Query: 374 VSTEELHQIFGIYGEIREIRDTQHKH----NHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
V+ E+L ++F YG + + + F+ + + A A++ +N + K +
Sbjct: 353 VNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPL 412
Query: 430 KLEASRPGGARRFMVQS 446
+ ++ R+ +QS
Sbjct: 413 YVALAQRKEERQAHLQS 429
>sp|P15771|NUCL_CHICK Nucleolin OS=Gallus gallus GN=NCL PE=1 SV=1
Length = 694
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 274 EHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTA-CKHRGFVMISYYDIRAARNAMK 332
E +RTLFV+N+ V + E+K +FE ++R + +G I + A A++
Sbjct: 367 ERDARTLFVKNLPYRVTEDEMKNVFENALEVRLVLNKEGSSKGMAYIEFKTEAEAEKALE 426
Query: 333 ALQNKPLRRRKLDIHYSIPKDNPSEKDANQG-------TLVVFNLDSSVSTEELHQIFGI 385
Q + R + I Y+ K S++++ +G TL+V NL + S E L ++F
Sbjct: 427 EKQGTEVDGRAMVIDYTGEK---SQQESQKGGGERESKTLIVNNLSYAASEETLQELFKK 483
Query: 386 YGEIREIRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRP 436
I+ ++ Q + + F+EF A+ AL + N +++ G+ I+LE S P
Sbjct: 484 ATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSP 535
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 80/197 (40%), Gaps = 16/197 (8%)
Query: 251 DFVGGVSNQGVSAGSVVGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYT- 309
D+ G S Q G GE S+TL V N++ + L+ LF++ I+
Sbjct: 441 DYTGEKSQQESQKGG-------GERESKTLIVNNLSYAASEETLQELFKKATSIKMPQNN 493
Query: 310 ACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQG------ 363
+ +G+ + + A+ A+ + N + R + + +S P +A G
Sbjct: 494 QGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSK 553
Query: 364 TLVVFNLDSSVSTEELHQIF--GIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNR 421
TL V L + E L + F I I RDT F++F A+ A +
Sbjct: 554 TLFVRGLSEDTTEETLRESFEGSISARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMED 613
Query: 422 SDVAGKQIKLEASRPGG 438
++ G ++ L+ ++P G
Sbjct: 614 GEIDGNKVTLDFAKPKG 630
>sp|Q93W34|RP45C_ARATH Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana
GN=RBP45C PE=2 SV=1
Length = 415
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 21/189 (11%)
Query: 267 VGEHPYGEHPSRTLFVRNINSNVEDSEL----KALFEQFGDIRTI--YTACKHRGFVMIS 320
GE E P T+FV ++ +V D L KA++ + + T + +G+ +
Sbjct: 162 AGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVR 221
Query: 321 YYDIRAARNAMKAL-----QNKPLR------RRKLDIH---YSIPKDNPSEKDANQGTLV 366
+ D AM + ++P+R ++ L + Y + N E D T+
Sbjct: 222 FADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIF 281
Query: 367 VFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAG 426
V +D SV+ ++L +FG +GE+ ++ K F+++ + AE AL LN + + G
Sbjct: 282 VGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKR-CGFVQYANRACAEQALSVLNGTQLGG 340
Query: 427 KQIKLEASR 435
+ I+L R
Sbjct: 341 QSIRLSWGR 349
>sp|Q0CR95|PABP_ASPTN Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156)
GN=pab1 PE=3 SV=1
Length = 753
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N+++ +++ L F FG+I + A +G+ + Y AA NA+K +
Sbjct: 138 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 197
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK----DANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + + I K + K AN + + NLD +S EE Q+F +GEI
Sbjct: 198 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITS 257
Query: 392 I---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD + K F+ + +A+ A+ +N +V G+++
Sbjct: 258 ATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKL 299
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF G IR A R G+ ++Y + A+
Sbjct: 47 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 106
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L ++ + I +S + +P+ + QG + + NLD+++ + LH F +G I
Sbjct: 107 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILS 164
Query: 392 IRDTQHK----HNHKFIEFYDIRAAETALRTLN 420
+ Q + + F+ + AA A++ +N
Sbjct: 165 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 197
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKALQ 335
++++N++ + + E + +FE+FG+I + + K RGF ++Y +A+ A+ +
Sbjct: 231 VYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVDEMN 290
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK-------------DANQGT-LVVFNLDSSVSTEELHQ 381
+K ++ +KL + + K E+ QG L V NL + E+L +
Sbjct: 291 DKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRE 350
Query: 382 IFGIYGEI---REIRDT 395
+F YG I + +RDT
Sbjct: 351 MFAPYGTITSAKVMRDT 367
>sp|O97018|SXL_CHRRU Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2
Length = 307
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTI-----YTACKHRGFVMISYYDIRAARNAMKAL 334
L V + ++ D EL ALF G I T Y G+ + + A+NA+K+L
Sbjct: 87 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSL 146
Query: 335 QNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE--- 391
+R ++L + Y+ P S KD N L V NL +++ +EL +IFG YG I +
Sbjct: 147 NGVTVRNKRLKVSYARP-GGESIKDTN---LYVTNLPRTITDDELEKIFGKYGNIVQKNI 202
Query: 392 IRD--TQHKHNHKFIEFYDIRAAETALRTLN 420
+RD T F+ F A+ A+ LN
Sbjct: 203 LRDKLTGKPRGVAFVRFNKREEAQEAISALN 233
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 309 TACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVF 368
+A HRG Y D +AM ++ N ++ S D + N L+V
Sbjct: 32 SAMNHRGGRGGGYNDFSGGGSAMGSMCNMAPAISTNSVN-SGGGDCGDNQGCNGTNLIVN 90
Query: 369 NLDSSVSTEELHQIFGIYGEIREIR-----DTQHKHNHKFIEFYDIRAAETALRTLNRSD 423
L ++ EL+ +F G I R T + + F++F A+ A+++LN
Sbjct: 91 YLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVT 150
Query: 424 VAGKQIKLEASRPGG 438
V K++K+ +RPGG
Sbjct: 151 VRNKRLKVSYARPGG 165
>sp|Q9FPJ8|RB45A_ARATH Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana
GN=RBP45A PE=2 SV=1
Length = 387
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 22/183 (12%)
Query: 274 EHPSRTLFVRNINSNVEDSELKALFEQ-FGDIRTIY-----TACKHRGFVMISYYDIRAA 327
E P T+FV ++ V D L F+ +G ++ T + +G+ + + D
Sbjct: 150 EGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQ 209
Query: 328 RNAMKALQNKPLRRRKLDIHYSIPKD---------------NPSEKDANQGTLVVFNLDS 372
AM + + R + I + K+ N + D N T+ V LD+
Sbjct: 210 MRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDA 269
Query: 373 SVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLE 432
+V+ +EL IFG +GE+ ++ K F+++ + +AE AL LN + + G+ I+L
Sbjct: 270 NVTDDELKSIFGQFGELLHVKIPPGKR-CGFVQYANKASAEHALSVLNGTQLGGQSIRLS 328
Query: 433 ASR 435
R
Sbjct: 329 WGR 331
>sp|Q8LPQ9|FPA_ARATH Flowering time control protein FPA OS=Arabidopsis thaliana GN=FPA
PE=2 SV=2
Length = 901
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQN 336
S L+V ++ +S+L LF ++GDI I T RGF I Y + A A +ALQ
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQG 75
Query: 337 KPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQ 396
L ++ I Y+ P P + +L V + +VS ++L + F +G+I + R +
Sbjct: 76 ANLNGSQIKIEYARPA-KPCK------SLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLR 128
Query: 397 HKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASR 435
+ FI++Y++ A A +++N + G ++++ R
Sbjct: 129 ERKT-AFIDYYEMDDALQA-KSMNGKPMGGSFLRVDFLR 165
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 365 LVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDV 424
L V +L + +L ++FG YG+I I FI + + A A L +++
Sbjct: 20 LWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQGANL 78
Query: 425 AGKQIKLEASRPG 437
G QIK+E +RP
Sbjct: 79 NGSQIKIEYARPA 91
>sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=pab-1 PE=3 SV=1
Length = 764
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N+++ +++ L F FG+I + A +G+ + Y AA A+K +
Sbjct: 150 IFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVN 209
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK----DANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + + IPK + K AN + V N+++ V+ EE ++F +GE+
Sbjct: 210 GMLLNEKKVYVGHHIPKKDRQSKFEEMKANFTNVYVKNINNEVTDEEFRELFAKFGEVTS 269
Query: 392 ---IRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD + K F+ F AA A+ LN D G+ +
Sbjct: 270 SSLARDQEGKSRGFGFVNFTTHEAAAQAVDELNGKDFRGQDL 311
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF Q G IR A R G+ ++Y A+
Sbjct: 59 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKAL 118
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L ++ R I +S + +P+ + G + + NLD+++ + LH F +G I
Sbjct: 119 EELNYTLIKGRPCRIMWS--QRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFGNILS 176
Query: 392 IRDTQHKH----NHKFIEFYDIRAAETALRTLN 420
+ Q +H + F+ + AA A++ +N
Sbjct: 177 CKVAQDEHGNSKGYGFVHYETDEAASQAIKHVN 209
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 21/137 (15%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKALQ 335
++V+NIN+ V D E + LF +FG++ + A K RGF +++ AA A+ L
Sbjct: 243 VYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQAVDELN 302
Query: 336 NKPLRRRKLDIHYSIPKDNPSE-----------KDAN--QGT-LVVFNLDSSVSTEELHQ 381
K R + L + + K E + AN QG L + NL V ++L
Sbjct: 303 GKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVDDDKLRA 362
Query: 382 IFGIYGEI---REIRDT 395
+F YG I + +RD+
Sbjct: 363 MFSEYGPITSAKVMRDS 379
>sp|P20397|NUCL_XENLA Nucleolin OS=Xenopus laevis GN=ncl PE=2 SV=3
Length = 651
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 274 EHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTAC--KHRGFVMISYYDIRAARNAM 331
E SRTLFV+NI + EL+ +FE DIR I T ++G + + + A A+
Sbjct: 321 ERDSRTLFVKNIPYSTTVEELQEIFENAKDIR-IPTGKDGSNKGIAYVEFSNEDEANKAL 379
Query: 332 KALQNKPLRRRKLDIHYSIPK-DNPSEKDANQG---TLVVFNLDSSVSTEELHQIFGIYG 387
+ Q + R + + ++ K N K +G LVV NL S + + L ++F
Sbjct: 380 EEKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEKAT 439
Query: 388 EIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEAS 434
IR ++ FIEF A+ A+ + N +++ G+ I+LE S
Sbjct: 440 SIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFS 486
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 20/211 (9%)
Query: 234 GMELEGDDRLFAVQKNSDFVGGVS-NQGVSAGSVVGEHPYGEHPSRTLFVRNINSNVEDS 292
G E+EG +F DF G S N G G P G+ S+ L V N++ + +
Sbjct: 384 GAEIEGRS-IFV-----DFTGEKSQNSGNKKG------PEGD--SKVLVVNNLSYSATED 429
Query: 293 ELKALFEQFGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPK 352
L+ +FE+ IR + +GF I + A++AM + N + R + + +S
Sbjct: 430 SLREVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGG 489
Query: 353 DNPSEK---DANQGTLVVFNLDSSVSTEELHQIF--GIYGEIREIRDTQHKHNHKFIEFY 407
A TL V L + E L + F + I RDT F++F
Sbjct: 490 GPQGGGRGGSAQSKTLFVRGLSEDTTEETLKEAFDGSVNARIVTDRDTGASKGFGFVDFS 549
Query: 408 DIRAAETALRTLNRSDVAGKQIKLEASRPGG 438
A+ A + ++ G ++ L+ ++P G
Sbjct: 550 TAEDAKAAKEAMEDGEIDGNKVTLDFAKPKG 580
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 279 TLFVRNINSNVEDSELK-ALFEQFGDIRTIYTACKHRGFVMISYYDIRAARNAMKALQ-- 335
++F+ N+NS E ELK AL E F + Y D + KAL+
Sbjct: 234 SIFIGNLNSTKEFDELKDALREFFSKKNLTIQDIRIGNSKKFGYVDFSSEEEVEKALKLT 293
Query: 336 NKPLRRRKLDIHYSIPKD------NPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEI 389
K + ++ I ++ D N E+D+ TL V N+ S + EEL +IF +I
Sbjct: 294 GKKILGTEVKIEKAMAFDKNKTAENKKERDSR--TLFVKNIPYSTTVEELQEIFENAKDI 351
Query: 390 REIRDTQHKHNH--KFIEFYDIRAAETALRTLNRSDVAGKQI 429
R I + N ++EF + A AL +++ G+ I
Sbjct: 352 R-IPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSI 392
>sp|Q9LEB4|RBP45_NICPL Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia
GN=RBP45 PE=1 SV=1
Length = 409
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 22/178 (12%)
Query: 279 TLFVRNINSNVEDSELKALFEQ-FGDIR-----TIYTACKHRGFVMISYYDIRAARNAMK 332
T+FV ++ ++V D L+ F+ + +R T + +G+ + + D AM
Sbjct: 177 TIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMT 236
Query: 333 ALQNKPLRRRKLDI---------------HYSIPKDNPSEKDANQGTLVVFNLDSSVSTE 377
+ R + I Y P+ E D N T+ V LD +V+ E
Sbjct: 237 EMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVAEE 296
Query: 378 ELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASR 435
L Q+F YGE+ ++ K F++F +AE AL +LN + + G+ I+L R
Sbjct: 297 HLRQVFSPYGELVHVKIVAGKR-CGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGR 353
>sp|Q6CSV3|PABP_KLULA Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PAB1 PE=3
SV=1
Length = 592
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 17/184 (9%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMK 332
S +F++N++ +++ L F FG++ + A RGF + + + A++A++
Sbjct: 137 SGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIE 196
Query: 333 ALQNKPLRRRKLDIHYSIPKDNP----SEKDANQGTLVVFNLDSSVSTEELHQIFGIYGE 388
A+ + ++ + +PK + E AN + V N+D + EE Q+F YGE
Sbjct: 197 AVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGE 256
Query: 389 IREI---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPGGARRFMV 444
I +D + K F+ F D AA A+ LN GK+ K +A G A++
Sbjct: 257 IVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELN-----GKEFKSQALYVGRAQKKYE 311
Query: 445 QSEQ 448
++E+
Sbjct: 312 RAEE 315
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIY----TACKHRGFVMISYYDIRAARNAMKALQ 335
++V+NI+ D E + LF Q+G+I + K +GF +++ D AA A++ L
Sbjct: 233 IYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELN 292
Query: 336 NKPLRRRKLDIHYSIPKDNPSEKDANQG--------------TLVVFNLDSSVSTEELHQ 381
K + + L + + K +E+ Q L + NLD S+ E+L +
Sbjct: 293 GKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKE 352
Query: 382 IFGIYGEI---REIRDTQ-HKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPG 437
F YG I R +RD + + F+ F A A+ N+ VAGK + + ++
Sbjct: 353 EFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRK 412
Query: 438 GARR 441
RR
Sbjct: 413 DVRR 416
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 274 EHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHR------GFVMISYYDIRAA 327
E+ + +L+V ++ N+ ++ L +F G I +I C+ G+ ++Y D A
Sbjct: 46 ENNNASLYVGELDPNITEALLYDVFSPLGPISSI-RVCRDAVTKASLGYAYVNYTDYEAG 104
Query: 328 RNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYG 387
+ A++ L + R I +S + +P+ + G + + NL ++ + LH+ F +G
Sbjct: 105 KKAIQELNYAEINGRPCRIMWS--ERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFG 162
Query: 388 EIREIR----DTQHKHNHKFIEFYDIRAAETALRTLN 420
E+ + + + F+ F + A+ A+ +N
Sbjct: 163 EVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVN 199
>sp|A1D4K4|PABP_NEOFI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1
Length = 751
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N+++ +++ L F FG+I + A +G+ + Y AA NA+K +
Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 201
Query: 336 NKPLRRRKLDI-HYSIPKDNPS---EKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + H+ KD S E AN + + N+D V+ EE ++F +GEI
Sbjct: 202 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITS 261
Query: 392 I---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD + K F+ F +A+ A+ +N ++ G+++
Sbjct: 262 ATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKL 303
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF G IR A R G+ ++Y + A+
Sbjct: 51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 110
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L ++ + I +S + +P+ + QG + + NLD+++ + LH F +G I
Sbjct: 111 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILS 168
Query: 392 IRDTQHK----HNHKFIEFYDIRAAETALRTLN 420
+ Q + + F+ + AA A++ +N
Sbjct: 169 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 201
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKALQ 335
++++NI+ V D E + +FE+FG+I + + K RGF +++ +A+ A+ +
Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMN 294
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK-------------DANQGT-LVVFNLDSSVSTEELHQ 381
+K ++ +KL + + K E+ QG L V NL V E+L +
Sbjct: 295 DKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRE 354
Query: 382 IFGIYGEI---REIRDT 395
+F +G I + +RDT
Sbjct: 355 LFSPFGTITSAKVMRDT 371
Score = 37.7 bits (86), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 346 IHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGE---IREIRD--TQHKHN 400
+ + P PS + +L V LD SV+ L+++F G+ IR RD T+
Sbjct: 35 VESASPSATPSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLG 94
Query: 401 HKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ ++ + + E AL LN + + GK ++
Sbjct: 95 YAYVNYNNTADGERALEDLNYTLIKGKPCRI 125
>sp|Q4WK03|PABP_ASPFU Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=pab1 PE=3 SV=1
Length = 753
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N+++ +++ L F FG+I + A +G+ + Y AA NA+K +
Sbjct: 142 VFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 201
Query: 336 NKPLRRRKLDI-HYSIPKDNPS---EKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + H+ KD S E AN + + N+D V+ EE ++F +GEI
Sbjct: 202 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITS 261
Query: 392 I---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD + K F+ F +A+ A+ +N ++ G+++
Sbjct: 262 ATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKL 303
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF G IR A R G+ ++Y + A+
Sbjct: 51 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 110
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L ++ + I +S + +P+ + QG + + NLD+++ + LH F +G I
Sbjct: 111 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILS 168
Query: 392 IRDTQHK----HNHKFIEFYDIRAAETALRTLN 420
+ Q + + F+ + AA A++ +N
Sbjct: 169 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 201
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKALQ 335
++++NI+ V D E + +FE+FG+I + + K RGF +++ +A+ A+ +
Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVDEMN 294
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK-------------DANQGT-LVVFNLDSSVSTEELHQ 381
+K ++ +KL + + K E+ QG L V NL V E+L +
Sbjct: 295 DKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRE 354
Query: 382 IFGIYGEI---REIRDT 395
+F +G I + +RDT
Sbjct: 355 LFSPFGTITSAKVMRDT 371
Score = 38.1 bits (87), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 346 IHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGE---IREIRD--TQHKHN 400
+ + P PS + +L V LD SV+ L+++F G+ IR RD T+
Sbjct: 35 VESASPSTTPSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLG 94
Query: 401 HKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ ++ + + E AL LN + + GK ++
Sbjct: 95 YAYVNYNNTADGERALEDLNYTLIKGKPCRI 125
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=pab1 PE=2 SV=2
Length = 732
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N++S +++ L F FG+I + A +G+ + Y AA NA+K +
Sbjct: 132 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVN 191
Query: 336 NKPLRRRKLDI-HYSIPKDNPS---EKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + H+ KD S E AN + + N+D V EE ++F +GEI
Sbjct: 192 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITS 251
Query: 392 I---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD++ K F+ F +A+ A+ +N +V +++
Sbjct: 252 ATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKL 293
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIY----TACKHRGFVMISYYDIRAARNAMKALQ 335
++++NI+ VED E + LFE+FG+I + + K RGF +++ +A+ A++ +
Sbjct: 225 IYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQAAVEEMN 284
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK-------------DANQGT-LVVFNLDSSVSTEELHQ 381
+K +R +KL + + K E+ QG L V NL V ++L +
Sbjct: 285 DKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVDDDKLRE 344
Query: 382 IFGIYGEI---REIRDT 395
+FG YG I + +RDT
Sbjct: 345 LFGPYGTITSAKVMRDT 361
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF G IR A R G+ ++Y D A+
Sbjct: 41 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERAL 100
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L ++ + I +S + +P+ + QG + + NLDS++ + LH F +G I
Sbjct: 101 DELNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 158
Query: 392 IRDTQHK----HNHKFIEFYDIRAAETALRTLN 420
+ Q + + F+ + AA A++ +N
Sbjct: 159 CKVAQDEFGVSKGYGFVHYETAEAANNAIKHVN 191
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 364 TLVVFNLDSSVSTEELHQIFGIYGE---IREIRD--TQHKHNHKFIEFYDIRAAETALRT 418
+L V LD SV+ L+++F G+ IR RD T+ + ++ + D E AL
Sbjct: 43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102
Query: 419 LNRSDVAGKQIKL 431
LN + + GK ++
Sbjct: 103 LNYTLIKGKPCRI 115
>sp|O17310|SXL_MUSDO Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1
Length = 324
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTI-----YTACKHRGFVMISYYDIRAARNAMKAL 334
L V + ++ D EL ALF G I T Y G+ + + A+NA+K +
Sbjct: 104 LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTV 163
Query: 335 QNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE--- 391
+R ++L + Y+ P S KD N L V NL +++ +EL +IFG YG I +
Sbjct: 164 NGITVRNKRLKVSYARP-GGESIKDTN---LYVTNLPRTITDDELEKIFGKYGNIVQKNI 219
Query: 392 IRD--TQHKHNHKFIEFYDIRAAETALRTLN 420
+RD T F+ F A+ A+ LN
Sbjct: 220 LRDKLTGRPRGVAFVRFNKREEAQEAISALN 250
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 360 ANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIR-----DTQHKHNHKFIEFYDIRAAET 414
N L+V L ++ EL+ +F G I R T + + F++F A+
Sbjct: 99 VNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQN 158
Query: 415 ALRTLNRSDVAGKQIKLEASRPGG 438
A++T+N V K++K+ +RPGG
Sbjct: 159 AIKTVNGITVRNKRLKVSYARPGG 182
>sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=pab1 PE=3 SV=1
Length = 765
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N++S +++ L F FG+I + A +G+ + Y AA NA+K +
Sbjct: 139 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 198
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK----DANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + + I K + K AN + + N+D V+ EE ++F +GEI
Sbjct: 199 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITS 258
Query: 392 I---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD + K F+ F +A+ A+ +N ++ +++
Sbjct: 259 ATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKL 300
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKALQ 335
++++NI+ +V + E + LFE+FG+I + + K RGF +++ +A+ A+ +
Sbjct: 232 VYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVDEMN 291
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK-------------DANQGT-LVVFNLDSSVSTEELHQ 381
K +R +KL + + K E+ QG L V NL V E+L +
Sbjct: 292 EKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRE 351
Query: 382 IFGIYGEI---REIRDT 395
+FG YG I + +RDT
Sbjct: 352 LFGPYGTITSAKVMRDT 368
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF G IR A R G+ ++Y + A+
Sbjct: 48 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 107
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L ++ + I +S + +P+ + QG + + NLDS++ + LH F +G I
Sbjct: 108 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 165
Query: 392 IRDTQHK----HNHKFIEFYDIRAAETALRTLN 420
+ Q + + F+ + AA A++ +N
Sbjct: 166 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 198
>sp|A2Q848|PABP_ASPNC Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=pab1 PE=3 SV=1
Length = 731
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N++S +++ L F FG+I + A +G+ + Y AA NA+K +
Sbjct: 144 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 203
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK----DANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + + I K + K AN + + NLDS + +E ++F +GEI
Sbjct: 204 GMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITS 263
Query: 392 I---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD + K F+ F +A+ A+ +N ++ +++
Sbjct: 264 ATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKL 305
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKALQ 335
++++N++S ++D E + +FE+FG+I + + K RGF +++ +A+ A++ +
Sbjct: 237 VYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVEEMN 296
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK-------------DANQGT-LVVFNLDSSVSTEELHQ 381
+K +R +KL + + K E+ QG L V NL + E+L +
Sbjct: 297 DKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDIDDEKLRE 356
Query: 382 IFGIYGEI---REIRDT 395
+FG YG I + +RDT
Sbjct: 357 LFGPYGTITSAKVMRDT 373
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF G IR A R G+ ++Y + A+
Sbjct: 53 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 112
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L ++ + I +S + +P+ + QG + + NLDS++ + LH F +G I
Sbjct: 113 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 170
Query: 392 IRDTQHK----HNHKFIEFYDIRAAETALRTLN 420
+ Q + + F+ + AA A++ +N
Sbjct: 171 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 203
>sp|Q1DXH0|PABP_COCIM Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Coccidioides immitis (strain RS) GN=PAB1 PE=3 SV=1
Length = 768
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N+++ +++ L F FG+I + A +G+ + Y AA+NA+K +
Sbjct: 145 VFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVN 204
Query: 336 NKPLRRRKLDI-HYSIPKDNPS---EKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + H+ KD S E AN + V N+D + EE +F +GEI
Sbjct: 205 GMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITS 264
Query: 392 ---IRDTQ--HKHNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD + F+ F A A+ LN D G+++
Sbjct: 265 ATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKL 307
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF G IR A R G+ ++Y + A+
Sbjct: 54 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 113
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L ++ R I +S + +P+ + QG + + NLD+++ + LH F +G I
Sbjct: 114 EDLNYTLIKGRPCRIMWS--QRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILS 171
Query: 392 IRDTQHK----HNHKFIEFYDIRAAETALRTLN 420
+ Q + + F+ + AA+ A++ +N
Sbjct: 172 CKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVN 204
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA-----CKHRGFVMISYYDIRAARNAMKAL 334
++V+NI+ + + E + LFE+FG+I + A K RGF +++ A A++AL
Sbjct: 238 VYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEAL 297
Query: 335 QNKPLRRRKLDIHYSIPKDNPSEK-------------DANQGT-LVVFNLDSSVSTEELH 380
+K + +KL + + K E+ QG L + NL + E+L
Sbjct: 298 NDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLR 357
Query: 381 QIFGIYGEI 389
++F YG I
Sbjct: 358 ELFSSYGTI 366
>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3
PE=2 SV=1
Length = 660
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 275 HPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHR-----GFVMISYYDIRAARN 329
HP+ +L+ +++ V ++ L LF+ ++ ++ C+ + G+ I++ + A
Sbjct: 46 HPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSV-RVCRDQNRRSLGYAYINFSNPNDAYR 104
Query: 330 AMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEI 389
AM+AL PL R + I S +PS + + +G + + NLD+S+ + L + F +G I
Sbjct: 105 AMEALNYTPLFDRPIRIMLS--NRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTI 162
Query: 390 REIR----DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
+ T + F++F +A+ A+ LN + KQ+
Sbjct: 163 LSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQV 206
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 25/171 (14%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYT----ACKHRGFVMISYYDIRAARNAMKAL- 334
++V+N+ + + EL+ F +FG I + + R F +++ AA +A++ +
Sbjct: 231 VYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMN 290
Query: 335 --------------QNKPLRRRKLDIHYSIPKDNPSEKDANQGT-LVVFNLDSSVSTEEL 379
Q K R +L + + N EK +QG L + NLD SV E+L
Sbjct: 291 GISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEK--SQGANLYLKNLDDSVDDEKL 348
Query: 380 HQIFGIYGEIREIRDTQHKHN-HKFIEFYDIRAAETALRTLNRSDVAGKQI 429
++F YG + + + + F E ALR L S++ GK I
Sbjct: 349 KEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRAL--SEMNGKMI 397
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACK----HRGFVMISYYDIRAARNAMKALQ 335
L+++N++ +V+D +LK +F ++G++ + RGF ++Y + A A+ +
Sbjct: 334 LYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 393
Query: 336 NKPLRRRKLDIHYSIPKDN 354
K + R+ L I + K++
Sbjct: 394 GKMIGRKPLYIALAQRKED 412
>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1 SV=1
Length = 375
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 108/232 (46%), Gaps = 16/232 (6%)
Query: 278 RTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRG---FVMISYYDIRAARNAMKAL 334
RTL+V N++ +V + + LF Q G ++ +H + + +Y+ R A A+ A+
Sbjct: 9 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 68
Query: 335 QNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEI---RE 391
+ + +++ ++++ + + +N + V +L ++TE++ F +G+I R
Sbjct: 69 NGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARV 128
Query: 392 IRD--TQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLE-ASRPGGARRFMVQSEQ 448
++D T + F+ FY+ AE A+ + + G+QI+ A+R A + S Q
Sbjct: 129 VKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPK----STQ 184
Query: 449 EQDDLNLCQIPFDDLSSGQMVSSGVITSTCMDNGSIQVLHSATRSPAIALTE 500
E N Q+ F+D+ + + + + +G L T SP + E
Sbjct: 185 EN---NTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIME 233
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 24/175 (13%)
Query: 280 LFVRNINSNVEDSELKALFEQFG---DIRTI--YTACKHRGFVMISYYDIRAARNAMKAL 334
+FV +++ + ++K+ F FG D R + K +G+ +S+Y+ A NA+ +
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158
Query: 335 QNKPLRRRKLDIHYSIPK------------------DNPSEKDANQGTLVVFNLDSSVST 376
+ L R++ +++ K D ++ T+ + S ++
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTD 218
Query: 377 EELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKL 431
+ + Q F +G+I EIR K + F+ F +A A+ ++N + + G +K
Sbjct: 219 QLMRQTFSPFGQIMEIRVFPEK-GYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 272
>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 629
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 279 TLFVRNINSNVEDSELKALFEQFGDIRTIYTACK------HRGFVMISYYDIRAARNAMK 332
+L+V +++ NV DS+L F Q G + T+ C+ G+ +++ + + A A++
Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTV-RVCRDLVTRRSLGYGYVNFTNPQDAARAIQ 95
Query: 333 ALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIREI 392
L PL + + + YS +PS + + G + + NLD S+ + LH F +G I
Sbjct: 96 ELNYIPLYGKPIRVMYS--HRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSC 153
Query: 393 R----DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
+ + + F+++ + +A+ A+ LN + KQ+
Sbjct: 154 KVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQV 194
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKAL- 334
++V+N+ + D +LK F ++G I + K +GF +++ + A A+++L
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLN 276
Query: 335 --------------QNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELH 380
Q K R +L + Y ++K L V NLD S+S E+L
Sbjct: 277 GHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADK-FQSSNLYVKNLDPSISDEKLK 335
Query: 381 QIFGIYGEI---REIRDTQ-HKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRP 436
+IF +G + + +RD F+ F A A+ L+ + K + + ++
Sbjct: 336 EIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQR 395
Query: 437 GGARRFMVQSEQEQ 450
RR +Q++ Q
Sbjct: 396 KEDRRVRLQAQFSQ 409
>sp|Q9SAB3|RB45B_ARATH Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana
GN=RBP45B PE=1 SV=1
Length = 405
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 274 EHPSRTLFVRNINSNVEDSELKALFE------QFGDIRTIYTACKHRGFVMISYYDIRAA 327
+ P T+FV ++ ++V D L F + + + +G+ + + D
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210
Query: 328 RNAMKALQNKPLRRRKLDIHYSIPKDN---------------PSEKDANQGTLVVFNLDS 372
AM + P R + I + K ++ D N T+ V LD+
Sbjct: 211 IRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDA 270
Query: 373 SVSTEELHQIFGIYGEIREIRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLE 432
SV+ + L +F YGEI ++ K F++F + AE ALR LN + G ++L
Sbjct: 271 SVTDDHLKNVFSQYGEIVHVKIPAGKRC-GFVQFSEKSCAEEALRMLNGVQLGGTTVRLS 329
Query: 433 ASR 435
R
Sbjct: 330 WGR 332
>sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566
/ DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PAB1
PE=3 SV=2
Length = 631
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTAC----KHRGFVMISYYDIRAARNAMKALQ 335
++V+N+ V++++ + +F+ FG + +++ K RGF +++ + +A NA+K +
Sbjct: 241 VYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMN 300
Query: 336 NKPL------------RRRKLDIHYSIPKDNPSEKDAN-QGT-LVVFNLDSSVSTEELHQ 381
+K + +R +LD + + EK + QG L V NLD S+ +E+L +
Sbjct: 301 DKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEE 360
Query: 382 IFGIYGEIREIR----DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPG 437
F +G I R D F+ F A A+ +N+ + GK + + ++
Sbjct: 361 EFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRK 420
Query: 438 GARRFMVQSE 447
RR ++ +
Sbjct: 421 DVRRSQLEQQ 430
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 7/117 (5%)
Query: 278 RTLFVRNINSNVEDSELKALFEQFGDIRTIYTA-----CKHRGFVMISYYDIRAARNAMK 332
+L+V +N +V ++ L +F G + +I K G+ ++++ A++
Sbjct: 58 ASLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIE 117
Query: 333 ALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEI 389
L + R I +S + +PS + G + + NL ++ + LH F +G I
Sbjct: 118 ELNYSLVDGRPCRIMWS--QRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRI 172
>sp|A1CRM1|PABP_ASPCL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 /
DSM 816 / NCTC 3887 / NRRL 1) GN=pab1 PE=3 SV=1
Length = 754
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N++S +++ L F FG+I + A +G+ + Y AA NA+K +
Sbjct: 141 VFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 200
Query: 336 NKPLRRRKLDI-HYSIPKDNPSEKD---ANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + H+ KD S+ D AN + + N+D V+ EE +IF +GEI
Sbjct: 201 GMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITS 260
Query: 392 I---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD + K F+ + +A+ A+ ++ +V +++
Sbjct: 261 ATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKL 302
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKALQ 335
++++NI+ +V + E + +FEQFG+I + + K RGF ++Y +A+ A+ +
Sbjct: 234 IYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVDEMH 293
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK-------------DANQGT-LVVFNLDSSVSTEELHQ 381
+K ++ +KL + + K E+ QG L V NL V E+L +
Sbjct: 294 DKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVDDEKLRE 353
Query: 382 IFGIYGEI---REIRDT 395
+FG YG I + +RD+
Sbjct: 354 LFGPYGTITSAKVMRDS 370
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAM 331
S +L+V ++ +V ++ L LF G IR A R G+ ++Y + A+
Sbjct: 50 SASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERAL 109
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L ++ + I +S + +P+ + QG + + NLDS++ + LH F +G I
Sbjct: 110 EDLNYTLIKGKPCRIMWS--QRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILS 167
Query: 392 IRDTQHK----HNHKFIEFYDIRAAETALRTLN 420
+ Q + + F+ + AA A++ +N
Sbjct: 168 CKVAQDEFGNSKGYGFVHYETAEAANNAIKHVN 200
>sp|A5DW14|PABP_LODEL Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=PAB1 PE=3
SV=1
Length = 661
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRG----FVMISYYDIRAARNAMKALQ 335
+F++N++ +++ L F FG I ++ A G F + Y AA+ A++++
Sbjct: 157 IFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVN 216
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK----DANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L R++ + + K + K AN + V N+D + + +E ++F +G+I
Sbjct: 217 GMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITS 276
Query: 392 I---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
I +D + K F+ F + AA A+ LN ++ G++I
Sbjct: 277 IYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKI 318
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 22/190 (11%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIY----TACKHRGFVMISYYDIRAARNAMKALQ 335
++V+NI+ + E + LF FG I +IY K +GF +++ + AA A++ L
Sbjct: 250 IYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELN 309
Query: 336 NKPLRRRKLDIHYSIPKDNPSEKDANQ--------------GTLVVFNLDSSVSTEELHQ 381
+K + +K+ + + K +E+ Q L V NLD + +E+L +
Sbjct: 310 DKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEE 369
Query: 382 IFGIYGEIRE----IRDTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPG 437
F +G I + D F+ F A A+ +N+ V GK + + ++
Sbjct: 370 EFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRK 429
Query: 438 GARRFMVQSE 447
RR ++ +
Sbjct: 430 DVRRSQLEQQ 439
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTI-----YTACKHRGFVMISYYDIRAARNAM 331
S +L+V +N +V ++ L +F G + +I + K G+ ++Y+ + A+
Sbjct: 66 SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAI 125
Query: 332 KALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
+ L P+ R I +S + +PS + + G + + NL ++ + LH F +G+I
Sbjct: 126 EELNYTPVEGRPCRIMWS--QRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILS 183
Query: 392 IR----DTQHKHNHKFIEFYDIRAAETALRTLN 420
++ D F+ + AA+ A+ ++N
Sbjct: 184 VKVATDDLGQSKCFGFVHYETEEAAQAAIESVN 216
Score = 40.4 bits (93), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 29/208 (13%)
Query: 349 SIPKDNPSEKDANQG------TLVVFNLDSSVSTEELHQIFGIYGE---IREIRDTQHKH 399
S+P D+ E+ + G +L V L+ SV+ L +IF G+ IR RD K
Sbjct: 47 SVPADSAEEQGESSGIAENSASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKK 106
Query: 400 N--HKFIEFYDIRAAETALRTLNRSDVAGKQIKL-------EASRPGGARRFMVQSEQEQ 450
+ + ++ ++ + E A+ LN + V G+ ++ A R G F+
Sbjct: 107 SLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAI 166
Query: 451 DDLNLCQIPFDDLSS-GQMVSSGVITSTCMDNGSIQVLHSATRSPAIALTESHQTSSVPN 509
D+ L D S+ G+++S V T + +H T A A ES N
Sbjct: 167 DNKAL----HDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESV------N 216
Query: 510 GLPSLARVGSIGKQFGHYEPNLSLDEMK 537
G+ R +GK + L+EMK
Sbjct: 217 GMLLNDREVYVGKHVSKKDRESKLEEMK 244
>sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=PAB1 PE=3 SV=3
Length = 744
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N++ +++ L F FG+I + A +G+ + Y AA NA+K +
Sbjct: 138 VFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVN 197
Query: 336 NKPLRRRKLDIHYSIPKDNP----SEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + + IPK E AN + V N+D V+ E+ ++F +G+I
Sbjct: 198 GMLLNEKKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITS 257
Query: 392 ---IRDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD Q K F+ + AA A+ LN + G+++
Sbjct: 258 ASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKL 299
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 20/191 (10%)
Query: 246 VQKNSDFVGGVSNQGVSAGSVVGEHP-------YGEHPSRTLFVRNINSNVEDSELKALF 298
VQ +D G N V A S G+ P S +L+V ++ +V ++ L LF
Sbjct: 11 VQDGADANGAQINTNVPAAS--GDAPTPTTAAQQAHQNSASLYVGELDPSVTEAMLFELF 68
Query: 299 EQFGD---IRTIYTACKHR--GFVMISYYDIRAARNAMKALQNKPLRRRKLDIHYSIPKD 353
G IR A R G+ ++Y A++ L ++ + I +S +
Sbjct: 69 SSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRIMWS--QR 126
Query: 354 NPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEIREIRDTQHK----HNHKFIEFYDI 409
+P+ + QG + + NLD ++ + LH F +G I + Q + + F+ +
Sbjct: 127 DPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETA 186
Query: 410 RAAETALRTLN 420
AA A++ +N
Sbjct: 187 EAANNAIKHVN 197
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA----CKHRGFVMISYYDIRAARNAMKALQ 335
++V+NI+ +V D + + LFE+ GDI + A K RGF ++Y AA A+ L
Sbjct: 231 IYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLN 290
Query: 336 NKPLRRRKLDIHYSIPKDNPSE-------------KDANQGT-LVVFNLDSSVSTEELHQ 381
+ + +KL + + K E + QG L + NL+ V E+L
Sbjct: 291 DIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRD 350
Query: 382 IFGIYGEI 389
+F +G I
Sbjct: 351 MFTPFGTI 358
>sp|Q74ZS6|PABP_ASHGO Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=PAB1 PE=3 SV=1
Length = 585
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMK 332
S ++++N++ +++ L F FG+I + A RGF + + + AR+A++
Sbjct: 125 SGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIE 184
Query: 333 ALQNKPLRRRKLDIHYSIPKDNPSEK----DANQGTLVVFNLDSSVSTEELHQIFGIYGE 388
A+ + +++ + + K + K A + V N+D S EE ++FG YG+
Sbjct: 185 AVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKFTNVYVKNIDQETSQEEFEELFGKYGK 244
Query: 389 IREI---RDTQHK-HNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
I +D++ K F+ F D AA A+ LN + G+++
Sbjct: 245 ITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKL 289
Score = 40.0 bits (92), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 269 EHPYGEHPSRTLFVRNINSNVEDSELKALFEQFGDIRTIYTACKHR------GFVMISYY 322
E P E +L+V + V ++ L +F G + +I C+ G+ ++++
Sbjct: 29 ETPKVETSGASLYVGELEPTVSEALLYDIFSPIGSVSSI-RVCRDAITNTSLGYAYVNFH 87
Query: 323 DIRAARNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQI 382
D A A++ L ++ + I +S + +PS + G + + NL ++ + LH+
Sbjct: 88 DHEAGPKAIEQLNYTLIKGKPCRIMWS--QRDPSLRKKGSGNIYIKNLHPAIDNKSLHET 145
Query: 383 FGIYGEI 389
F +G I
Sbjct: 146 FSTFGNI 152
>sp|Q6BI95|PABP_DEBHA Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=PAB1 PE=3 SV=2
Length = 627
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
++ +NI+ + + E K LFE +G I +IY H +GF +++ + +A A+ L
Sbjct: 234 VYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELN 293
Query: 336 NKPLRRRKLDIHYSIPKDNPSEKDANQG--------------TLVVFNLDSSVSTEELHQ 381
+K + +K+ + + K E+ Q L + NLD ++ +E+L +
Sbjct: 294 DKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEE 353
Query: 382 IFGIYGEIREIR----DTQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQIKLEASRPG 437
F +G I R +T F+ F A A+ +N+ + GK + + ++
Sbjct: 354 EFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRK 413
Query: 438 GARRFMVQSE 447
RR ++ +
Sbjct: 414 DVRRSQLEQQ 423
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKHRG----FVMISYYDIRAARNAMKALQ 335
+F++N++ +++ L F FG I + A G F + Y AA A++ +
Sbjct: 141 IFIKNLHPAIDNKALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVN 200
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK----DANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L R++ + I K + K AN + N+D S EE ++F YG+I
Sbjct: 201 GMLLNDREVYVGKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITS 260
Query: 392 IR-DTQHKHNHK---FIEFYDIRAAETALRTLNRSDVAGKQI 429
I + H+ K F+ F + +A A+ LN ++ G++I
Sbjct: 261 IYLEKDHEGKSKGFGFVNFENHESAVKAVDELNDKEINGQKI 302
Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 9/119 (7%)
Query: 277 SRTLFVRNINSNVEDSELKALFEQFGDIRTIYTAC------KHRGFVMISYYDIRAARNA 330
S +L+V +N +V ++ L +F G + +I C K G+ ++++ A
Sbjct: 50 SASLYVGELNPSVNEALLFEIFSPIGQVASI-RVCRDAVTKKSLGYAYVNFHKFEDGEKA 108
Query: 331 MKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYGEI 389
++ L + R I +S + +PS + G + + NL ++ + LH F +G+I
Sbjct: 109 IEDLNYSLIEGRPCRIMWS--QRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKI 165
>sp|A4QUF0|PABP_MAGO7 Polyadenylate-binding protein, cytoplasmic and nuclear
OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 /
FGSC 8958) GN=PAB1 PE=3 SV=1
Length = 762
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 275 HP--SRTLFVRNINSNVEDSELKALFEQFGD---IRTIYTACKHR--GFVMISYYDIRAA 327
HP S +L+V ++ +V ++ L LF Q G IR A R G+ ++Y
Sbjct: 56 HPQASASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADG 115
Query: 328 RNAMKALQNKPLRRRKLDIHYSIPKDNPSEKDANQGTLVVFNLDSSVSTEELHQIFGIYG 387
A++ L ++ R I +S + +P+ + QG + + NLD ++ + LH F +G
Sbjct: 116 EKALEELNYTLIKGRPCRIMWS--QRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 173
Query: 388 EIREIRDTQHKH----NHKFIEFYDIRAAETALRTLN 420
I + Q ++ + F+ + AA A++ +N
Sbjct: 174 NILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVN 210
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 26/140 (18%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTA-----CKHRGFVMISYYDIRAARNAMKAL 334
++V+NIN V D E + LFE++GD+ + A K RGF +++ A A++ L
Sbjct: 244 IYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQEL 303
Query: 335 ---------------QNKPLRRRKLDIHYSIPKDNPSEKDANQGT-LVVFNLDSSVSTEE 378
Q K R +L Y + + K QG L + NLD V E+
Sbjct: 304 NEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASK--YQGVNLYIKNLDDEVDDEK 361
Query: 379 LHQIFGIYGEI---REIRDT 395
L Q+F +G I + +RD+
Sbjct: 362 LRQLFSEFGPITSAKVMRDS 381
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 280 LFVRNINSNVEDSELKALFEQFGDIRTIYTACKH----RGFVMISYYDIRAARNAMKALQ 335
+F++N++ +++ L F FG+I + A +G+ + Y AA A+K +
Sbjct: 151 VFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVN 210
Query: 336 NKPLRRRKLDIHYSIPKDNPSEK----DANQGTLVVFNLDSSVSTEELHQIFGIYGEIRE 391
L +K+ + + IPK + K AN + V N++ V+ +E +F YG++
Sbjct: 211 GMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTS 270
Query: 392 ---IRD--TQHKHNHKFIEFYDIRAAETALRTLNRSDVAGKQI 429
RD T F+ F A A++ LN + G+ +
Sbjct: 271 SSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNL 313
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 391,382,594
Number of Sequences: 539616
Number of extensions: 17939679
Number of successful extensions: 35157
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 509
Number of HSP's that attempted gapping in prelim test: 33890
Number of HSP's gapped (non-prelim): 1337
length of query: 987
length of database: 191,569,459
effective HSP length: 127
effective length of query: 860
effective length of database: 123,038,227
effective search space: 105812875220
effective search space used: 105812875220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)