BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001977
(987 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255548475|ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
gi|223545774|gb|EEF47278.1| ATP binding protein, putative [Ricinus communis]
Length = 1306
Score = 1320 bits (3416), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 692/989 (69%), Positives = 795/989 (80%), Gaps = 28/989 (2%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP ++ +NGRSPLVNPQRQITSFF K+ SPSPSP+ S + + S ++ +
Sbjct: 1 MAPSRKPSNGRSPLVNPQRQITSFFCKTTSPSPSPSPSPSPAS-TLSKGQTPKSNPNPNP 59
Query: 61 PSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTP---AAAKSYGEDVLRKRIRVYWPLD 117
SP PTTPSP+QS KK LVIG+TP+P PS A S+G++V+ KR++VYWPLD
Sbjct: 60 KPSSPGPTTPSPVQSKTKKPLLVIGKTPTPSPSPSMPRVMANSFGKEVVEKRVKVYWPLD 119
Query: 118 KAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS--FKKV 175
K WYEGCVKS+D++ KHLVQYDD E+E+LDLG EKIEWV+ESV+ KRLRR S FK
Sbjct: 120 KTWYEGCVKSYDEDSGKHLVQYDDFEEEVLDLGNEKIEWVEESVTKFKRLRRGSLAFKNT 179
Query: 176 VVEDDEEMENV----EDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRG- 230
V+ED EEM++V E+ D DSSD+DW KNV K D+SEDE+ DL DE E +G
Sbjct: 180 VIED-EEMKDVADIEEENACVDGDDSSDEDWAKNVDK-DISEDEDADLEDEVEEDSYKGA 237
Query: 231 ----RKRKSSGVKKSKSD----GNAVNADFKSPIIKPVKIFGSDKLSNGFDN--PVMGDV 280
RKRK G K S G+ K I+PVK G + NG N + D
Sbjct: 238 KSDSRKRKVYGAKASVKKKKSCGDVSEGAVKVSFIEPVKD-GGNGFCNGLGNGNASINDA 296
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
SERFS REA+K FLG +RRDAKR+RPGD YDPRTLYLPP F+++LS GQ+QWWEFKSK
Sbjct: 297 SERFSMREAEKMWFLGAERRDAKRKRPGDADYDPRTLYLPPSFVKSLSGGQRQWWEFKSK 356
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYR 400
HMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPER FSMNVEKL RKGYR
Sbjct: 357 HMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERIFSMNVEKLTRKGYR 416
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
VLV+EQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL+ANPDASYLMA+TE
Sbjct: 417 VLVIEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLTANPDASYLMAVTE 476
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
S Q+ Q+ + FGICV DVATSRIILGQ +DD +CS LC LLSELRPVEIIKPA LS
Sbjct: 477 SQQNLEGQNFEPTFGICVADVATSRIILGQFVDDSECSSLCRLLSELRPVEIIKPAKSLS 536
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT----AESLNKADSNVAN 576
ETER +LRHTRNPLVNDLVPLSEFWDAE TV E+K IY I+ + SLNK D + AN
Sbjct: 537 SETERLLLRHTRNPLVNDLVPLSEFWDAEKTVHEVKIIYKHISDQSASRSLNKEDKDTAN 596
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
Q +G +CLP IL EL++ GD+G LSALGGTL+YLK++FLDETLLRFAKFE LPCS
Sbjct: 597 LQFTEEGPSCLPEILLELVNKGDNGRLALSALGGTLYYLKQAFLDETLLRFAKFESLPCS 656
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
F D+A+KPYM+LDA ALENLE+FENSR+G SGTLYAQLNHCVTAFGKRLL+TWLARPL
Sbjct: 657 DFCDVAQKPYMILDAAALENLEIFENSRNGGLSGTLYAQLNHCVTAFGKRLLKTWLARPL 716
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
Y+ I +RQDAVAGLRGVNQP LEFRKALSRLPDMERL+AR+FASSEANGRN+NKV+L
Sbjct: 717 YHLRSIVDRQDAVAGLRGVNQPATLEFRKALSRLPDMERLIARIFASSEANGRNANKVIL 776
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
YEDAAKK LQEFISAL GCELM+QACSSL ILEN ESRQLHH+LTPGK P I SILKH
Sbjct: 777 YEDAAKKLLQEFISALRGCELMEQACSSLAVILENVESRQLHHLLTPGKSRPHIHSILKH 836
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
FK+AFDWVEANNSGR+IPH GVD++YDSAC+K++ IE+SLTKHLKEQ+K+LGD SI YVT
Sbjct: 837 FKEAFDWVEANNSGRVIPHEGVDIEYDSACEKLRVIESSLTKHLKEQQKILGDKSIMYVT 896
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
+GK+ YLLEVPE RGS+PRDYELRSSKKGF+RYWTP+IKKLLGELSQAESEKE ALK+I
Sbjct: 897 VGKEAYLLEVPEHFRGSIPRDYELRSSKKGFYRYWTPSIKKLLGELSQAESEKELALKNI 956
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
LQRLI QFCEHH+KWRQ+ +ATA L +++
Sbjct: 957 LQRLIVQFCEHHDKWRQLNSATAELDVLI 985
>gi|225437545|ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 1286 bits (3327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/990 (68%), Positives = 787/990 (79%), Gaps = 45/990 (4%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP +R +NGRSPLVN Q QIT+FFSK++S + +K + NP + +
Sbjct: 1 MAPTRRMSNGRSPLVNQQSQITAFFSKTSSSPSPSPVL----SKQDLNPK------PSPS 50
Query: 61 PSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPA-AAKSYGEDVLRKRIRVYWPLDKA 119
PSPSPSPTTPSP+Q+ +K LVIG + + PSTP +KSYGE+V+ +R++VYWPLDK+
Sbjct: 51 PSPSPSPTTPSPVQAKLRKPLLVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKS 110
Query: 120 WYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS-FKKVVVE 178
WY GCVKSFD+ +HLVQYDD ++E LDLGKEKIEWV++ L+RLRR S F+K VV
Sbjct: 111 WYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSVFEKGVVP 170
Query: 179 DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLV-------------DEQEN 225
E NVE+E D DSSD+DW K G+E+V +D E + ++
Sbjct: 171 VGEA--NVEEESGGD--DSSDEDWGKGKGREEVEDDSEDVEFEEEEDEEEEVEGPKKGQS 226
Query: 226 KVLRGRKRKSSGV------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGD 279
K + +KRK+ G K+ KS G A FK ++P+K S K S+ DN + GD
Sbjct: 227 KKVDPKKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKNAESRKASDILDNVLPGD 286
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
ERF AREA+K FLG +R+DAKRR PGD YDPRTLYLPP+FL+NL+ GQ+QWWEFKS
Sbjct: 287 ALERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKS 346
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+HMDKVIFFKMGKFYELFEMDAH+GAKELDLQYMKG QPHCGFPE+NFS+NVEKLARKGY
Sbjct: 347 RHMDKVIFFKMGKFYELFEMDAHIGAKELDLQYMKGGQPHCGFPEKNFSINVEKLARKGY 406
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE+LSANPDASYLMA+T
Sbjct: 407 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVT 466
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
ES Q +R FG+CVVDVATSRIILGQ DD +CS LCCLLSELRPVEIIKPAN+L
Sbjct: 467 ES-----CQFEERSFGVCVVDVATSRIILGQFRDDSECSTLCCLLSELRPVEIIKPANLL 521
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI----TAESLNKADSNVA 575
SPETERA++RHTR+PLVN+LVP+SEFWD++ TV EI+++Y + SLN+A+ +V
Sbjct: 522 SPETERALMRHTRSPLVNELVPISEFWDSKKTVSEIRSVYRCFNDLSVSGSLNEANLSVK 581
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
S E D L LP ILS+L++ G+SGS LSALGGTLFYLK++F+DETLLRFAKFEL P
Sbjct: 582 GSFVEEDPLG-LPDILSKLVNAGESGSLALSALGGTLFYLKQAFMDETLLRFAKFELFPY 640
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
SG D+ KPYMVLDA ALENLE+FENSR GDSSGTLYAQLNHCVTAFGKRLL+TWLARP
Sbjct: 641 SGVSDIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARP 700
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
LY+ IRERQDAVAGLRGVN P ALEFRK LSRLPDMERLLAR+FASSEANGRN+NKVV
Sbjct: 701 LYHLDSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEANGRNANKVV 760
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILK 815
YEDAAKKQLQEFISAL GCELM QACSSLG ILEN ES LHH+LTPGKGLP I S++
Sbjct: 761 FYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGKGLPDIHSVIN 820
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
HFK+AFDWVEANNSGRIIPH GVD +YDSACK VKEIE L KHLKEQ+KLLGD SI +V
Sbjct: 821 HFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQQKLLGDASINFV 880
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
TIGK+ YLLEVPESLRG++PRDYELRSSKKGFFRYWTPNIKK LGELS AESEKES L+S
Sbjct: 881 TIGKEAYLLEVPESLRGNIPRDYELRSSKKGFFRYWTPNIKKFLGELSHAESEKESKLRS 940
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
ILQRLI +FCEHH+KWRQ+V++TA L +++
Sbjct: 941 ILQRLISRFCEHHDKWRQLVSSTAELDVLI 970
>gi|224128348|ref|XP_002320307.1| predicted protein [Populus trichocarpa]
gi|222861080|gb|EEE98622.1| predicted protein [Populus trichocarpa]
Length = 1288
Score = 1284 bits (3323), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 667/1009 (66%), Positives = 778/1009 (77%), Gaps = 83/1009 (8%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPT--ISKLNPNKSNSNPNPNPNSNSN 58
MAP ++ +NGRSP+VNPQRQIT+FFSK+ +PSPSP+ +SK KS++ PNPNP+S +
Sbjct: 1 MAPSRKPSNGRSPIVNPQRQITAFFSKTTTPSPSPSPTLSKKQIPKSHTKPNPNPSSRTQ 60
Query: 59 RTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDK 118
S +P+ +QS PKK LVIGQTPSP PS YG++ + +R+RVYWPLDK
Sbjct: 61 SPSSSPTTPSP---VQSKPKKPLLVIGQTPSPSPSKVGV---YGKEAVERRVRVYWPLDK 114
Query: 119 AWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS--FKKVV 176
+WYEG VKS+D E KHL+QYDD E+ELLDL EKIEWV+ V KRLRR S F+K+V
Sbjct: 115 SWYEGLVKSYDDESKKHLIQYDDSEEELLDLNNEKIEWVEPCVKKFKRLRRGSLGFRKIV 174
Query: 177 VEDDEEMENVEDEISDDRSDSSDDD-----WNKNVGKEDVSEDEEVDLVDEQE------- 224
+EDDE MENVE + S DD W KN K DVSE+E+VDL+DE+E
Sbjct: 175 LEDDE-MENVEGDNGGAGGGSGGDDSSDEDWGKNAEK-DVSEEEDVDLMDEEEADDGKKG 232
Query: 225 -NKVLRGRKRKSSGV-------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPV 276
RKRK+SG KK KS G+A + +++PVK
Sbjct: 233 KRGGKDSRKRKASGEGGKLDLGKKGKSGGDASTGGVRVSVVEPVK--------------- 277
Query: 277 MGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
H +RRDAKRRRPGDV YDPRTLYLP +F ++L+ GQ+QWWE
Sbjct: 278 ----------------HKESKERRDAKRRRPGDVDYDPRTLYLPAEFAKSLTGGQRQWWE 321
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
FKSKHMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPE+NFS+NVEKLAR
Sbjct: 322 FKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLNVEKLAR 381
Query: 397 KGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
KGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV+TKGTLTEGE LSANPDASYLM
Sbjct: 382 KGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVITKGTLTEGEFLSANPDASYLM 441
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
ALTES QS A+Q +R FG+CVVDV TSRIILGQ DD +CS LCCLLSELRPVEI+KPA
Sbjct: 442 ALTESRQSLANQGLERIFGVCVVDVTTSRIILGQFGDDAECSSLCCLLSELRPVEIVKPA 501
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI----TAESLNKADS 572
MLS ETER ++RHTRNPLVN+L PLSEFWDAE TV E+K IY I + LNK D
Sbjct: 502 KMLSSETERVMVRHTRNPLVNELAPLSEFWDAERTVQEVKTIYKHIGDLSASGPLNKTDL 561
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
+ N +CLP IL E ++ G++GS LSALGG+L+YLK++FLDETLLRFAKFE
Sbjct: 562 DTTNLNVGEYRPSCLPSILLEFVNKGENGSLALSALGGSLYYLKQAFLDETLLRFAKFES 621
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
LPCS F ++AKKPYM+LDA ALENLE+FENSR+GD+SGTLYAQLNHCVTAFGKRLL+TWL
Sbjct: 622 LPCSDFCEVAKKPYMILDAAALENLEIFENSRNGDTSGTLYAQLNHCVTAFGKRLLKTWL 681
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
ARPLY+ I++RQDAVAGLRGVNQP LEF+K LS LPD+ERLLAR+F++SEANGRN+N
Sbjct: 682 ARPLYHLESIKDRQDAVAGLRGVNQPMMLEFQKVLSGLPDIERLLARIFSTSEANGRNAN 741
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
KVVLYEDAAKKQLQEFISAL GCEL+ QACSSL ILEN ES +LHH+LTPGKGLP I+
Sbjct: 742 KVVLYEDAAKKQLQEFISALRGCELVAQACSSLAVILENVESGRLHHLLTPGKGLPDILP 801
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
ILKHFK AFDWVEANNSGRIIPH GVD++YDSAC+KVKE+E+SL +HLKEQ+KLLGD SI
Sbjct: 802 ILKHFKSAFDWVEANNSGRIIPHEGVDVEYDSACEKVKEVESSLARHLKEQQKLLGDKSI 861
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK----------------GFFRYWTPNIK 916
TYVT+GK+ YLLEVPE LRGS+P+DYELRSSKK GF+RYWTP+IK
Sbjct: 862 TYVTVGKEAYLLEVPEHLRGSIPQDYELRSSKKIGSVSASMPIKAGRFQGFYRYWTPSIK 921
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
K LGELSQAESEKESALKSILQRLI FC++H+KWRQ+V+ATA L +++
Sbjct: 922 KFLGELSQAESEKESALKSILQRLIVCFCKYHDKWRQLVSATAELDVLI 970
>gi|297743972|emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 1253 bits (3241), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/986 (65%), Positives = 749/986 (75%), Gaps = 97/986 (9%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP +R +NGRSPLVN Q QIT+FFSK++S + K
Sbjct: 1 MAPTRRMSNGRSPLVNQQSQITAFFSKTSSSPSPSPLRK--------------------- 39
Query: 61 PSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPA-AAKSYGEDVLRKRIRVYWPLDKA 119
PL LVIG + + PSTP +KSYGE+V+ +R++VYWPLDK+
Sbjct: 40 -----------PL--------LVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKS 80
Query: 120 WYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS-FKKVVVE 178
WY GCVKSFD+ +HLVQYDD ++E LDLGKEKIEWV++ L+RLRR S F+K VV
Sbjct: 81 WYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSVFEKGVVP 140
Query: 179 DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLV-------------DEQEN 225
E NVE+E D DSSD+DW K G+E+V +D E + ++
Sbjct: 141 VGEA--NVEEESGGD--DSSDEDWGKGKGREEVEDDSEDVEFEEEEDEEEEVEGPKKGQS 196
Query: 226 KVLRGRKRKSSGV------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGD 279
K + +KRK+ G K+ KS G A FK ++P+K S K S+ DN + GD
Sbjct: 197 KKVDPKKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKNAESRKASDILDNVLPGD 256
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
ERF AREA+K FLG +R+DAKRR PGD YDPRTLYLPP+FL+NL+ GQ+QWWEFKS
Sbjct: 257 ALERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKS 316
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+HMDKVIFFKMGKFYELFEMDAH+GAKELDLQYMKG QPHCGFPE+NFS+NVEKLARKGY
Sbjct: 317 RHMDKVIFFKMGKFYELFEMDAHIGAKELDLQYMKGGQPHCGFPEKNFSINVEKLARKGY 376
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE+LSANPDASYLMA+T
Sbjct: 377 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVT 436
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
ES Q +R FG+CVVDVATSRIILGQ DD +CS LCCLLSELRPVEIIKPAN+L
Sbjct: 437 ES-----CQFEERSFGVCVVDVATSRIILGQFRDDSECSTLCCLLSELRPVEIIKPANLL 491
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
SPETERA++RHTR+PLVN+LVP+SEFWD++ TV EI+++Y
Sbjct: 492 SPETERALMRHTRSPLVNELVPISEFWDSKKTVSEIRSVYR------------------- 532
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
C + L++ G+SGS LSALGGTLFYLK++F+DETLLRFAKFEL P SG
Sbjct: 533 ------CFNDL--SLVNAGESGSLALSALGGTLFYLKQAFMDETLLRFAKFELFPYSGVS 584
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D+ KPYMVLDA ALENLE+FENSR GDSSGTLYAQLNHCVTAFGKRLL+TWLARPLY+
Sbjct: 585 DIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARPLYHL 644
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
IRERQDAVAGLRGVN P ALEFRK LSRLPDMERLLAR+FASSEANGRN+NKVV YED
Sbjct: 645 DSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEANGRNANKVVFYED 704
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
AAKKQLQEFISAL GCELM QACSSLG ILEN ES LHH+LTPGKGLP I S++ HFK+
Sbjct: 705 AAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGKGLPDIHSVINHFKE 764
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
AFDWVEANNSGRIIPH GVD +YDSACK VKEIE L KHLKEQ+KLLGD SI +VTIGK
Sbjct: 765 AFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQQKLLGDASINFVTIGK 824
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
+ YLLEVPESLRG++PRDYELRSSKKGFFRYWTPNIKK LGELS AESEKES L+SILQR
Sbjct: 825 EAYLLEVPESLRGNIPRDYELRSSKKGFFRYWTPNIKKFLGELSHAESEKESKLRSILQR 884
Query: 940 LIGQFCEHHNKWRQMVAATAGLTLIL 965
LI +FCEHH+KWRQ+V++TA L +++
Sbjct: 885 LISRFCEHHDKWRQLVSSTAELDVLI 910
>gi|356572787|ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
Length = 1269
Score = 1221 bits (3160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 633/986 (64%), Positives = 757/986 (76%), Gaps = 55/986 (5%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP +R NGRSPLVN Q QITSFF+KS SPSPSPT+SK NPN + + + +
Sbjct: 1 MAPSRRNTNGRSPLVNQQSQITSFFTKSASPSPSPTLSKTNPNPNPNPNPSPTPATPSPL 60
Query: 61 PSPSPSPTTPSPLQSNPKKSR--LVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDK 118
NPK+S+ LVIG + S A+ Y ++++ +RI+VYWPLDK
Sbjct: 61 ---------------NPKRSKPLLVIGASTS---PPSASPSLYFQELIGRRIKVYWPLDK 102
Query: 119 AWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL-LKRLRRD--SFKKV 175
AWYEG VKSFD +KH+V+YDDGE+E LDL KEKIEW+QES S LKRLRR + +K+
Sbjct: 103 AWYEGSVKSFDSLTSKHVVRYDDGEEESLDLSKEKIEWLQESSSKKLKRLRRGVPAVRKM 162
Query: 176 VVEDDEEMENV---EDEISDDRSDSSDDDWNKNVGKEDVSEDEE-VDLVDEQE------N 225
+++DD+E + DD DS+D+DW ED + EE DL DE +
Sbjct: 163 MIDDDDEEVEEEESHKKDDDDDDDSNDEDWGMKAALEDAGDAEEDTDLEDENDVAERAKG 222
Query: 226 KVLRGRKRKSSGV------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGD 279
K + +KRK SG KKSKS FK +++P + SNG DN + +
Sbjct: 223 KKVETKKRKLSGTEKQEPAKKSKSGVEVGKGAFKLSVLEPT----IKETSNGTDNVAITE 278
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+SERF+ REA K FL DRRDAKRRRPGD YD RT+YLPPDFLR+LS+GQKQWWEFKS
Sbjct: 279 ISERFALREAQKLRFLKEDRRDAKRRRPGDENYDSRTIYLPPDFLRSLSDGQKQWWEFKS 338
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
KHMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKG+QPHCGFPE+NFSMNVEKLARKGY
Sbjct: 339 KHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGDQPHCGFPEKNFSMNVEKLARKGY 398
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLVVEQT+TPEQLELRRKEKGSKDKVV+REIC+VVTKGTLT+GELLSANP+A+YLMALT
Sbjct: 399 RVLVVEQTDTPEQLELRRKEKGSKDKVVRREICSVVTKGTLTDGELLSANPEAAYLMALT 458
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E +++ ++ ++ +G+C+VDVATSR+ILGQ DDL+CSVLCC+LSE+RPVEI+KPA +L
Sbjct: 459 EHHENHPTEVSEHLYGVCIVDVATSRVILGQFKDDLECSVLCCILSEIRPVEIVKPAKLL 518
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S ETER +L+HTR+PLVN+LVP+ EFWDA+ TV ++K IY S+N +
Sbjct: 519 SAETERVLLKHTRDPLVNELVPIVEFWDADKTVDQLKRIYGNSNDVSVNNNE-------- 570
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
L CLP +L EL+ TGD LSALGG L+YL+++FLDE LLRFAKFELLPCSGFG
Sbjct: 571 ----LDCLPDVLLELVKTGDDSRSALSALGGALYYLRQAFLDERLLRFAKFELLPCSGFG 626
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D+A KPYMVLDA ALENLE+FENSR+GDSSGTLYAQLN CVTAFGKRLL+TWLARPL +
Sbjct: 627 DLASKPYMVLDAAALENLEIFENSRNGDSSGTLYAQLNQCVTAFGKRLLKTWLARPLCHV 686
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
++ERQ+AVAGL+GVN P ALEFRKAL +LPDMERLLAR+F+SSEA+GRN+N+VVLYED
Sbjct: 687 ESVKERQEAVAGLKGVNLPSALEFRKALYKLPDMERLLARIFSSSEASGRNANRVVLYED 746
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
A+KKQLQEFI AL GCE M QAC SLG IL + +SRQLHH+LTPGK LP + L HFKD
Sbjct: 747 ASKKQLQEFILALRGCEQMAQACFSLGVILSHVKSRQLHHLLTPGKVLPDVCMDLNHFKD 806
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
AFDWVEANNSGRIIP GVD +YDSACK VKEIE+SL KHLKEQ KLLG TSITYV +GK
Sbjct: 807 AFDWVEANNSGRIIPREGVDTEYDSACKAVKEIESSLLKHLKEQMKLLGSTSITYVNVGK 866
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
D YLLEVPE+L ++PRDYELRSS+KGFFRYW+P+IK L ELS AESEKES LKS LQR
Sbjct: 867 DTYLLEVPENLSKNIPRDYELRSSRKGFFRYWSPDIKVFLRELSHAESEKESLLKSTLQR 926
Query: 940 LIGQFCEHHNKWRQMVAATAGLTLIL 965
LIG+FCEHH KW+Q+V+ TA L +++
Sbjct: 927 LIGRFCEHHAKWKQLVSTTAELDVLI 952
>gi|147861780|emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 1221 bits (3159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 657/1027 (63%), Positives = 771/1027 (75%), Gaps = 64/1027 (6%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRT 60
MAP +R +NGRSPLVN Q QIT+FFSK++S +P+ S + NP + + +
Sbjct: 1 MAPTRRMSNGRSPLVNQQSQITAFFSKTSSSPSLSPSPSPSPSPVLSKQDLNPKPSPSPS 60
Query: 61 PSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPA-AAKSYGEDVLRKRIRVYWPLDKA 119
PSPSP+ +P +Q+ +K LVIG + + PSTP +KSYGE+V+ +R++VYWPLDK+
Sbjct: 61 PSPSPTTPSP--VQAKLRKPLLVIGPSKTTSPSTPVTGSKSYGEEVVNRRVKVYWPLDKS 118
Query: 120 WYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS-FKKVVVE 178
WY GCVKSFD+ +HLVQYDD ++E LDLGKEKIEWV++ L+RLRR S F+K VV
Sbjct: 119 WYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVEDKGRSLRRLRRGSVFEKGVVP 178
Query: 179 DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLV-------------DEQEN 225
E NVE+E D DSSD+DW K+ G+E+V +D E + ++
Sbjct: 179 VGEA--NVEEESGGD--DSSDEDWGKSKGREEVEDDSEDVEFEEEEDEEEEVEGPKKGQS 234
Query: 226 KVLRGRKRKSSGV------KKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGD 279
K + +KRK+ G K+ KS G A FK ++P+K S K S+ DN + GD
Sbjct: 235 KKVDPKKRKAVGEGTMGSGKRRKSSGGAEKNTFKVSSVEPMKNAESRKASDILDNVLPGD 294
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
ERF AREA+K FLG +R+DAKRR PGD YDPRTLYLPP+FL+NL+ GQ+QWWEFKS
Sbjct: 295 ALERFGAREAEKLPFLGGERKDAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKS 354
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+HMDKVIFFKMGKFYELFEMDAH+GAKELDLQYMK P + + +GY
Sbjct: 355 RHMDKVIFFKMGKFYELFEMDAHIGAKELDLQYMKSTSISFMNPFSSRILTGAPWTVQGY 414
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE+LSANPDASYLMA+T
Sbjct: 415 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSANPDASYLMAVT 474
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
ES Q +R FG+CVVDVATSRIILGQ DD +CS LCCLLSELRPVEIIKPAN+L
Sbjct: 475 ES-----CQFEERSFGVCVVDVATSRIILGQFRDDSECSTLCCLLSELRPVEIIKPANLL 529
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI----TAESLNKADSNVA 575
SPETERA++RHTR+PLVN+LVP+SEFWD++ TV EI+++Y + SLN+A+ +V
Sbjct: 530 SPETERALMRHTRSPLVNELVPISEFWDSKKTVSEIRSVYRCFNDLSVSGSLNEANLSVK 589
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
S E D L LP ILS+L++ G+SGS LSALGGTLFYLK++F+DETLLRFAKFEL P
Sbjct: 590 XSFVEEDPLG-LPDILSKLVNAGESGSLALSALGGTLFYLKQAFMDETLLRFAKFELFPY 648
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
SG D+ KPYMVLDA ALENLE+FENSR GDSSGTLYAQLNHCVTAFGKRLL+TWLARP
Sbjct: 649 SGVSDIFHKPYMVLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARP 708
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
LY+ IRERQDAVAGLRGVN P ALEFRK LSRLPDMERLLAR+FASSEANGRN+NKVV
Sbjct: 709 LYHLDSIRERQDAVAGLRGVNLPSALEFRKELSRLPDMERLLARIFASSEANGRNANKVV 768
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP------------ 803
YEDAAKKQLQEFISAL GCELM QACSSLG ILEN ES LHH+LTP
Sbjct: 769 FYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLLTPGTVGFYVNQIQK 828
Query: 804 ------------GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
GKGLP I S++ HFK+AFDWVEANNSGRIIPH GVD +YDSACK VKE
Sbjct: 829 SCLASYFLIICAGKGLPDIHSVINHFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKE 888
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
IE L KHLKEQ+KLLGD SI +VTIGK+ YLLEVPESLRG++PRDYELRSSKKGFFRYW
Sbjct: 889 IELRLKKHLKEQQKLLGDASINFVTIGKEAYLLEVPESLRGNIPRDYELRSSKKGFFRYW 948
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG---LTLILLDG 968
TPNIKK LGELS AESEKES LKSILQRLI +FCEHH+KWRQ+V++TAG T G
Sbjct: 949 TPNIKKFLGELSHAESEKESKLKSILQRLISRFCEHHDKWRQLVSSTAGSHXFTFXYGIG 1008
Query: 969 SLLHAFL 975
+ + +L
Sbjct: 1009 AWFYGYL 1015
>gi|15235223|ref|NP_192116.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|6226648|sp|O04716.2|MSH6_ARATH RecName: Full=DNA mismatch repair protein MSH6; Short=AtMSH6;
AltName: Full=MutS protein homolog 6
gi|3912921|gb|AAC78699.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|5763966|emb|CAB53337.1| mismatch repair protein msh6-1 [Arabidopsis thaliana]
gi|7268591|emb|CAB80700.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|332656719|gb|AEE82119.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1324
Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/1022 (62%), Positives = 767/1022 (75%), Gaps = 65/1022 (6%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60
Query: 50 ------------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAA 97
NPNP+SN SPSP P TPSP+QS KK LVIGQTPSPP S
Sbjct: 61 PSPSPPKKTPKLNPNPSSNLP-ARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSV--- 116
Query: 98 AKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK KH+V+Y+DGE+E LDLGKEK EWV
Sbjct: 117 VITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
Query: 158 --QESVSLLKRLRR--DSFKKVVVE--DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
++S RL+R + +KVV + DD EM NVE++ D DSSD+DW KNVGKE
Sbjct: 177 VGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEED-KSDGDDSSDEDWGKNVGKEVC 235
Query: 212 -SEDEEVDLVDEQE-----------------NKVLR--GRKRKSS------GVKKSKSDG 245
SE+++V+LVDE E N+V + RKRK+S G KKSK+D
Sbjct: 236 ESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDT 295
Query: 246 NAVNADFKSPIIKPVKIFG-SDKLSNGF-DNPVMGDVSERFSAREADKFHFLGPDRRDAK 303
+ FK+ +++P K G +D++ G DN + GD RF AR+++KF FLG DRRDAK
Sbjct: 296 GTILKGFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFLGVDRRDAK 355
Query: 304 RRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHV 363
RRRP D YDPRTLYLPPDF++ L+ GQ+QWWEFK+KHMDKV+FFKMGKFYELFEMDAHV
Sbjct: 356 RRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHV 415
Query: 364 GAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK 423
GAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP+QLE RRKE GSK
Sbjct: 416 GAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSK 475
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
DKVVKRE+CAVVTKGTLT+GE+L NPDASYLMALTE +S + + + FG+C+VDVAT
Sbjct: 476 DKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAEHNFGVCLVDVAT 535
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+IILGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R TRNPLVN+LVPLS
Sbjct: 536 QKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLS 595
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
EFWD+E T+ E+ IY RI + + + + + GDG + LP +LSEL + +GS
Sbjct: 596 EFWDSEKTIYEVGIIYKRINCQP---SSAYSSEGKILGDGSSFLPKMLSELATEDKNGSL 652
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
LSALGG ++YL+++FLDE+LLRFAKFE LP F ++ +K +MVLDA ALENLE+FENS
Sbjct: 653 ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 712
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
R+G SGTLYAQLN C+TA GKRLL+TWLARPLYN+ LI+ERQDAVA LRG N P++LEF
Sbjct: 713 RNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLEF 772
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
RK+LSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKKQ+QEFIS L GCE M +ACS
Sbjct: 773 RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACS 832
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
SL AIL++ SR+L H+LTPG+ LP I S +K+FKDAFDWVEA+NSGR+IPH G D +YD
Sbjct: 833 SLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYD 892
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
ACK V+E E+SL KHLKEQRKLLGD SI YVT+GKD YLLEVPESL GSVP DYEL SS
Sbjct: 893 CACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSS 952
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
KKG RYWTP IKKLL ELSQA+SEKESALKSI QRLIG+FCEH KWRQ+V+ATA L +
Sbjct: 953 KKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDV 1012
Query: 964 IL 965
++
Sbjct: 1013 LI 1014
>gi|297814117|ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
gi|297320779|gb|EFH51201.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
Length = 1326
Score = 1197 bits (3098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/1024 (61%), Positives = 764/1024 (74%), Gaps = 67/1024 (6%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKPNPNPNSPSP 60
Query: 50 -----------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAA 98
NPNP+S+ SPSP P TPSP+QS KK LVIGQTPSPP S A
Sbjct: 61 SPSPPKKTPKLNPNPSSDPP-ARSPSPGPATPSPVQSKFKKPLLVIGQTPSPPQS---AV 116
Query: 99 KSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDK-ECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK EC KH+V+Y+DGE+E LDLGKEKIEWV
Sbjct: 117 ITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKCEC-KHVVEYEDGEEESLDLGKEKIEWV 175
Query: 158 --QESVSLLKRLRR--DSFKKVVVEDDE--EMENVEDEISDDRSDSSD--DDWNKNVGKE 209
+S KRLRR + +KVV +DD+ EM NVE+E D +DW KNVGKE
Sbjct: 176 VGDKSGDRFKRLRRGASALRKVVTDDDDDVEMGNVEEEKGDKSDGDDSSDEDWGKNVGKE 235
Query: 210 ------------DVSEDEEVDLVDEQENKVLRG--------RKRKSS------GVKKSKS 243
D +E +E +LV+E++ + +G RKRK+S G KKS++
Sbjct: 236 LCESEEEDVELVDENEMDEDELVEEKDEETPKGSRVSKTDFRKRKTSEVTKSGGEKKSRT 295
Query: 244 DGNAVNADFKSPIIKP-VKIFGSDKLSNGF-DNPVMGDVSERFSAREADKFHFLGPDRRD 301
D + + FK+ +++P +KI +D++ DN + GD RF ARE++KF FLG DRRD
Sbjct: 296 DKDTILKGFKASVVEPPMKIGEADRVVKNLEDNILDGDALARFGARESEKFRFLGVDRRD 355
Query: 302 AKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDA 361
AKRRR D YDPRTLYLPPDF++ L+ GQ+QWWEFKSKHMDKV+FFKMGKFYELFEMDA
Sbjct: 356 AKRRRSTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKSKHMDKVVFFKMGKFYELFEMDA 415
Query: 362 HVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG 421
HVGAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP+QLE RRKE G
Sbjct: 416 HVGAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETG 475
Query: 422 SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
SKDKVVKREICAVVTKGTLT+GE+L NPDASY+MALTE + Q+ + FG+C+VDV
Sbjct: 476 SKDKVVKREICAVVTKGTLTDGEMLLTNPDASYIMALTEGGECLTDQTAEHNFGVCLVDV 535
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVP 541
AT +I+LGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R TRNPLVN+LVP
Sbjct: 536 ATKKIMLGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSSATERTIVRQTRNPLVNNLVP 595
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
SEFWD+E T+ E+ Y RI S + + + + GDG + LP ILSEL + +G
Sbjct: 596 FSEFWDSEKTIHEVGIFYKRI---SCQPSSAYSSEGKIPGDGSSFLPKILSELATEDKNG 652
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
S LSALGG ++YL+++FLDE+LLRFAKFE LPC F ++ +K +MVLDA ALENLE+FE
Sbjct: 653 SLALSALGGAIYYLRQAFLDESLLRFAKFESLPCCDFSNVNEKQHMVLDAAALENLEIFE 712
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
NSR+G SGTLYAQLN CVTA GKRLL+TWLARPLYN LI+ERQDAVA LRG N P++L
Sbjct: 713 NSRNGGYSGTLYAQLNQCVTASGKRLLKTWLARPLYNPELIKERQDAVAILRGENLPYSL 772
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQA 781
EFRKALSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKK++QEFIS L GCE M +A
Sbjct: 773 EFRKALSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKEVQEFISTLRGCETMAEA 832
Query: 782 CSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
CSSL AIL++ +SR+L H+L+PG+ LP I S +K+FKDAFDWVEA+NSGR+IPH G D +
Sbjct: 833 CSSLRAILKHDKSRRLLHLLSPGQILPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEE 892
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
+D ACK V+E E++L KHLKEQRKLLGD SI YVT+GKD YLLEVPE L GSVP DYEL
Sbjct: 893 FDCACKTVEEFESNLKKHLKEQRKLLGDPSINYVTVGKDEYLLEVPEILSGSVPHDYELC 952
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
SSKKG RYWTP IKKLL ELSQA+SEKESALKSI QRLIG+FCEH KWRQ+V+ATA L
Sbjct: 953 SSKKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAEL 1012
Query: 962 TLIL 965
+++
Sbjct: 1013 DVLI 1016
>gi|334186287|ref|NP_001190656.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|332656720|gb|AEE82120.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1321
Score = 1197 bits (3097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/1022 (62%), Positives = 764/1022 (74%), Gaps = 68/1022 (6%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60
Query: 50 ------------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAA 97
NPNP+SN SPSP P TPSP+QS KK LVIGQTPSPP S
Sbjct: 61 PSPSPPKKTPKLNPNPSSNLP-ARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSV--- 116
Query: 98 AKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK KH+V+Y+DGE+E LDLGKEK EWV
Sbjct: 117 VITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
Query: 158 --QESVSLLKRLRR--DSFKKVVVE--DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
++S RL+R + +KVV + DD EM NVE++ D DSSD+DW KNVGKE
Sbjct: 177 VGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEED-KSDGDDSSDEDWGKNVGKEVC 235
Query: 212 -SEDEEVDLVDEQE-----------------NKVLR--GRKRKSS------GVKKSKSDG 245
SE+++V+LVDE E N+V + RKRK+S G KKSK+D
Sbjct: 236 ESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDT 295
Query: 246 NAVNADFKSPIIKPVKIFG-SDKLSNGF-DNPVMGDVSERFSAREADKFHFLGPDRRDAK 303
+ FK+ +++P K G +D++ G DN + GD RF AR+++KF FLG D AK
Sbjct: 296 GTILKGFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFLGVD---AK 352
Query: 304 RRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHV 363
RRRP D YDPRTLYLPPDF++ L+ GQ+QWWEFK+KHMDKV+FFKMGKFYELFEMDAHV
Sbjct: 353 RRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHV 412
Query: 364 GAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK 423
GAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP+QLE RRKE GSK
Sbjct: 413 GAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSK 472
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
DKVVKRE+CAVVTKGTLT+GE+L NPDASYLMALTE +S + + + FG+C+VDVAT
Sbjct: 473 DKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAEHNFGVCLVDVAT 532
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+IILGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R TRNPLVN+LVPLS
Sbjct: 533 QKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLS 592
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
EFWD+E T+ E+ IY RI + + + + + GDG + LP +LSEL + +GS
Sbjct: 593 EFWDSEKTIYEVGIIYKRINCQP---SSAYSSEGKILGDGSSFLPKMLSELATEDKNGSL 649
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
LSALGG ++YL+++FLDE+LLRFAKFE LP F ++ +K +MVLDA ALENLE+FENS
Sbjct: 650 ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 709
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
R+G SGTLYAQLN C+TA GKRLL+TWLARPLYN+ LI+ERQDAVA LRG N P++LEF
Sbjct: 710 RNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLEF 769
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
RK+LSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKKQ+QEFIS L GCE M +ACS
Sbjct: 770 RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACS 829
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
SL AIL++ SR+L H+LTPG+ LP I S +K+FKDAFDWVEA+NSGR+IPH G D +YD
Sbjct: 830 SLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYD 889
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
ACK V+E E+SL KHLKEQRKLLGD SI YVT+GKD YLLEVPESL GSVP DYEL SS
Sbjct: 890 CACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSS 949
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
KKG RYWTP IKKLL ELSQA+SEKESALKSI QRLIG+FCEH KWRQ+V+ATA L +
Sbjct: 950 KKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDV 1009
Query: 964 IL 965
++
Sbjct: 1010 LI 1011
>gi|2104549|gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana]
Length = 1362
Score = 1183 bits (3060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/1060 (60%), Positives = 765/1060 (72%), Gaps = 103/1060 (9%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60
Query: 50 ------------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAA 97
NPNP+SN SPSP P TPSP+QS KK LVIGQTPSPP S
Sbjct: 61 PSPSPPKKTPKLNPNPSSNLP-ARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSV--- 116
Query: 98 AKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK KH+V+Y+DGE+E LDLGKEK EWV
Sbjct: 117 VITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
Query: 158 --QESVSLLKRLRR--DSFKKVVVE--DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
++S RL+R + +KVV + DD EM NVE++ D DSSD+DW KNVGKE
Sbjct: 177 VGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEED-KSDGDDSSDEDWGKNVGKEVC 235
Query: 212 -SEDEEVDLVDEQE-----------------NKVLR--GRKRKSS------GVKKSKSDG 245
SE+++V+LVDE E N+V + RKRK+S G KKSK+D
Sbjct: 236 ESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDT 295
Query: 246 NAVNADFKSPIIKPVKIFGSDK------LSNGF-DNPVMGDVSERFSAREADKFHFLGPD 298
+ FK+ +++P K G K + G DN + GD RF AR+++KF FLG D
Sbjct: 296 GTILKGFKASVVEPAKKIGQGKPKSLLLVVKGLEDNVLDGDALARFGARDSEKFRFLGVD 355
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQ--------KQWWEFKSKHMDKVIFFKM 350
RRDAKRRRP D YDPRTLYLPPDF++ L+ GQ +QWWEFK+KHMDKV+FFKM
Sbjct: 356 RRDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQVRRAHGNLRQWWEFKAKHMDKVVFFKM 415
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYELFEMDAHVGAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP
Sbjct: 416 GKFYELFEMDAHVGAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETP 475
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QLE RRKE GSKDKVVKRE+CAVVTKGTLT+GE+L NPDASYLMALTE +S + +
Sbjct: 476 DQLEQRRKETGSKDKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTA 535
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+ FG+C+VDVAT +IILGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R
Sbjct: 536 EHNFGVCLVDVATQKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQ 595
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
TRNPLVN+LVPLSEFWD+E T+ E+ IY RI + + + + + GDG + LP +
Sbjct: 596 TRNPLVNNLVPLSEFWDSEKTIYEVGIIYKRINCQP---SSAYSSEGKILGDGSSFLPKM 652
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
LSEL + +GS LSALGG ++YL+++FLDE+LLRFAKFE LP F ++ +K +MVLD
Sbjct: 653 LSELATEDKNGSLALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLD 712
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A ALENLE+FENSR+G SGTLYAQLN C+TA GKRLL+TWLARPLYN+ LI+ERQDAVA
Sbjct: 713 AAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVA 772
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
LRG N P++LEFRK+LSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKKQ+QEFIS
Sbjct: 773 ILRGENLPYSLEFRKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFIS 832
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILT-------------------------PGK 805
L GCE M +ACSSL AIL++ SR+L H+LT PG+
Sbjct: 833 TLRGCETMAEACSSLRAILKHDTSRRLLHLLTPGIINLLHIHILILANCTASHIISLPGQ 892
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
LP I S +K+FKDAFDWVEA+NSGR+IPH G D +YD ACK V+E E+SL KHLKEQRK
Sbjct: 893 SLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKEQRK 952
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
LLGD SI YVT+GKD YLLEVPESL GSVP DYEL SSKKG RYWTP IKKLL ELSQA
Sbjct: 953 LLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYWTPTIKKLLKELSQA 1012
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+SEKESALKSI QRLIG+FCEH KWRQ+V+ATA L +++
Sbjct: 1013 KSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLI 1052
>gi|449436747|ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/990 (63%), Positives = 745/990 (75%), Gaps = 54/990 (5%)
Query: 13 PLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSP 72
PLVN QRQITSFF+K PT N +S S+ TPSPSP+ +P
Sbjct: 13 PLVNQQRQITSFFTKK------PT---------GDNSAARTHSISSPTPSPSPNINSPPS 57
Query: 73 LQSNPKKSRLVIG--------QTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGC 124
+QS KK LVIG +P A KS+G+ V+ K+I+VYWPLDK WYEG
Sbjct: 58 VQSKRKKPLLVIGGGAPPFSSSSPGSSSLPDAEEKSHGDGVIGKKIKVYWPLDKTWYEGR 117
Query: 125 VKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEME 184
VK FD++ KHLVQYDD E+ELL LG EKIEWV+ES KRLRR S V E+M+
Sbjct: 118 VKMFDEKAGKHLVQYDDAEEELLVLGNEKIEWVEESAKKFKRLRRGSSPPVSAAVLEDMD 177
Query: 185 NVEDEISDDRSDSSD-DDWNKNVGK----------------EDVSEDEEVDLVDEQENKV 227
++ D D SD S +DW KNV ED SE++ V ++
Sbjct: 178 DLNDLSDGDGSDDSRDEDWGKNVENEVSEEEDVDLVEENEDEDGSEEDGVGKSRRKQGGQ 237
Query: 228 LRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFG--------SDKLSNGFDNPVMGD 279
+ +KRK S KK + + + S +++ S + G N + D
Sbjct: 238 VESKKRKMSNGKKVEVAPKKIKSSGGSVTSGGLQLSSMETKIKSESTSVLKGI-NEIASD 296
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
ERF++REA+KF FL DR+DA +R PGD YDP+TL+LPP F++NLS+GQ+QWWEFKS
Sbjct: 297 ALERFNSREAEKFRFLKEDRKDANKRCPGDPDYDPKTLHLPPYFVKNLSDGQRQWWEFKS 356
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
KHMDKV+FFKMGKFYELFEMDAH+GAKELDLQYMKG+QPHCGFPERNFS+NVEKLARKGY
Sbjct: 357 KHMDKVLFFKMGKFYELFEMDAHIGAKELDLQYMKGDQPHCGFPERNFSLNVEKLARKGY 416
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
RVLV+EQTETPEQLE RRKEKGSKDKVVKREICAVVTKGTLTEGE+LS NPDASYLMA+T
Sbjct: 417 RVLVIEQTETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVT 476
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E+ +Q +R G+CVVDVATSR+ILGQ DD +CS LCCLLSELRPVEIIKPA +L
Sbjct: 477 ENFYGLENQQ-ERILGVCVVDVATSRVILGQFGDDSECSALCCLLSELRPVEIIKPAKLL 535
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA---- 575
SPETER +L HTRNPLVN+LVPL EFWDAE TV E+K ++ I S++ + S +
Sbjct: 536 SPETERVLLTHTRNPLVNELVPLLEFWDAEKTVQEVKRLFKGIANRSVSGSSSEASLLND 595
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
N+ E DGL+ +P +LSEL++ ++GS LSALGG LFYLK++FLDETLLRFAKFELLPC
Sbjct: 596 NAARENDGLSYMPDVLSELVTADENGSWALSALGGILFYLKQAFLDETLLRFAKFELLPC 655
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
SGF D+ KPYMVLDA ALENLE+FENSR+GDSSGTLY+QLNHCVTAFGKRLL+TWLARP
Sbjct: 656 SGFSDVISKPYMVLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARP 715
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
LY+ I RQ AVA LRG N F+LEFRKALS+LPDMERLLAR+F++SEANGRN+ VV
Sbjct: 716 LYHVESIEARQGAVASLRGDNLSFSLEFRKALSKLPDMERLLARIFSNSEANGRNAINVV 775
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILK 815
LYEDAAKKQLQEFISAL GCELM QACSSL IL N +SR+L +LTPG+GLP + S+L
Sbjct: 776 LYEDAAKKQLQEFISALRGCELMLQACSSLRVILPNVKSRRLDCLLTPGEGLPDLHSVLS 835
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
HFKDAFDWVEAN+SGR+IP GVD++YDSAC+K++EI++SLTKHLKEQRKLLGDTSITYV
Sbjct: 836 HFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIREIQSSLTKHLKEQRKLLGDTSITYV 895
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
T+GK+ +LLEVPESL+G++P+ YELRSSKKGFFRYWTPNIKKLL ELS AESEKES+LKS
Sbjct: 896 TVGKETHLLEVPESLQGNIPQTYELRSSKKGFFRYWTPNIKKLLAELSLAESEKESSLKS 955
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
ILQRLI +FCEHH +WRQ+V+A A L +++
Sbjct: 956 ILQRLIRKFCEHHLQWRQLVSAIAELDVLI 985
>gi|357511353|ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
gi|355500980|gb|AES82183.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
Length = 1312
Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1022 (61%), Positives = 744/1022 (72%), Gaps = 91/1022 (8%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPLVNPQRQITSFF+KS SP L SNPN NP S SN P+PS
Sbjct: 3 RRNSNGRSPLVNPQRQITSFFTKSTSPLSPSLSKTLK-----SNPN-NPISKSN--PNPS 54
Query: 65 PSPTTPSPLQSN-PKKSRLVIGQTP--SPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWY 121
P+ TTPSPL N P K RLVI P SPPPS + KRIRVYWPLD+AWY
Sbjct: 55 PTLTTPSPLNPNKPHKPRLVIDAPPTISPPPSD--------SPFIGKRIRVYWPLDEAWY 106
Query: 122 EGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL-LKRLRRDS--FKKVVVE 178
EG VKSFD +KH ++YDD E+E +DL KEKIEW+Q+S S LKRLRR S +K+V+E
Sbjct: 107 EGTVKSFDTVTSKHRIRYDDDEEESIDLSKEKIEWIQDSSSKKLKRLRRGSSPIRKMVIE 166
Query: 179 ---DDEEMENVEDEISDDRSDSSDDDWNKNV-------------GKEDVSEDEEVDLVDE 222
+E + E++ DD DS D+DW KN + + + +
Sbjct: 167 VEECPKEEKQEEEDDDDDNDDSEDEDWGKNAVLENVVDDNDDEDMELEEENEVVESAKGK 226
Query: 223 QENKVLRGRKRKSSG------VKKSKSDGNAVN-ADFKSPIIKPVKIFGSDKLSNGFDNP 275
NKV +KRK G +KKSKS GN VN K + P+ K S+G DN
Sbjct: 227 NSNKV-EPKKRKLGGGAKMEPMKKSKS-GNEVNRVAVKLSPLAPLNNLEVRKTSDGADNV 284
Query: 276 VMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWW 335
GD SERF+ REA KFHFLG DRRDAKRRRPGD YD RTLYLPPDF+RNLS GQKQWW
Sbjct: 285 ATGDSSERFALREAQKFHFLGKDRRDAKRRRPGDENYDSRTLYLPPDFVRNLSGGQKQWW 344
Query: 336 EFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLA 395
EFKSKHMDKV+FFKMGKFYELFEMDAHVGAKEL+LQYM+GEQPHCGFPE+NF++NVE+LA
Sbjct: 345 EFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELELQYMRGEQPHCGFPEKNFTVNVERLA 404
Query: 396 RKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
RKGYRVLVVEQTETPEQ+ELRRKE GSKDKVV+REICAVV+KGTL +GE +S NP+A+YL
Sbjct: 405 RKGYRVLVVEQTETPEQMELRRKESGSKDKVVRREICAVVSKGTLIDGEFMSTNPEAAYL 464
Query: 456 MALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
MALTE ++ ++ ++R +G+CVVDVATSR+ILGQ DD +CS LC +LSE+RPVEI+KP
Sbjct: 465 MALTEYCENNPNEMSERTYGVCVVDVATSRVILGQFNDDSECSALCSILSEIRPVEIVKP 524
Query: 516 ANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA 575
A +LS ETERA+L+HTRNPLVN+L+P EFWDA+ T+ +K IY +++V+
Sbjct: 525 AKLLSAETERALLKHTRNPLVNELIPNVEFWDADKTLDHLKRIYGH---------NNDVS 575
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
A+ GL CLP +L EL+ T LSALGG L+YLK++FLDE LLRFA+FELLPC
Sbjct: 576 ---AQDGGLDCLPDVLVELVKTDHDSRSALSALGGALYYLKQAFLDEQLLRFAQFELLPC 632
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
S F +A KPYMVLDA ALENLE+FENSR+G+SSGTLYAQLN CVTAFGKRLL++WLARP
Sbjct: 633 SVFSGLASKPYMVLDAVALENLEIFENSRNGESSGTLYAQLNQCVTAFGKRLLKSWLARP 692
Query: 696 LYNSGLIRERQDAVAGLR--------------------------------GVNQPFALEF 723
LY+ I+ERQ+AVAGL+ GVN P LEF
Sbjct: 693 LYHVESIKERQEAVAGLKVHSLTMHFVFDSDVPLRYSDSFPPRLLDFFFHGVNLPHTLEF 752
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
RKALS+LPDMERLLAR+ +S +A+GRN+NKVVLYED++KKQLQEFISAL G ELM QAC
Sbjct: 753 RKALSKLPDMERLLARVLSSRDASGRNANKVVLYEDSSKKQLQEFISALRGLELMAQACL 812
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
SLG IL N +SRQL H+LTPGKGLP + L HFKDAFDWVEANNSGRIIPH GVD +YD
Sbjct: 813 SLGVILNNVKSRQLSHLLTPGKGLPDVSMDLNHFKDAFDWVEANNSGRIIPHEGVDKEYD 872
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
SA K V EIE+SL HLKEQRKLLG TSI+YV IGKD YLLEVPE+L ++PRDYE RSS
Sbjct: 873 SAGKAVNEIESSLLDHLKEQRKLLGSTSISYVGIGKDTYLLEVPENLSQNIPRDYERRSS 932
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
KKGF RYWTP+IK L ELS AESE+E+ LKS QR+I +FCEHH +W+Q+V+ATA L +
Sbjct: 933 KKGFVRYWTPDIKIFLKELSHAESERETLLKSTFQRMIERFCEHHTQWKQLVSATAELDV 992
Query: 964 IL 965
++
Sbjct: 993 LI 994
>gi|49615726|gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 1139 bits (2947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/993 (62%), Positives = 751/993 (75%), Gaps = 61/993 (6%)
Query: 13 PLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSP 72
PLVN Q QITSFF+K S S + S L P KSN N N + S SPTTPSP
Sbjct: 13 PLVNQQSQITSFFTKKPSSSSP-SPSPLFPLKSNPN--------PNPSSSSCASPTTPSP 63
Query: 73 LQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKEC 132
LQ K +L + P T KSYG++V+ KR++VYWPLDK WYEG VKSFD
Sbjct: 64 LQG---KRKLTL------PIPTLVLKKSYGQEVVDKRVKVYWPLDKNWYEGFVKSFDSAS 114
Query: 133 NKHLVQYDDGEDELLDLGKEKIEWVQES-VSLLKRLRRDSFKKVVVEDDEEMENVEDEIS 191
KHLV+YDDGE+E+++L +EKIEWV+E+ +RLRR F V + EE E +ED S
Sbjct: 115 GKHLVEYDDGEEEMIELAEEKIEWVEEAPARKFRRLRR--FSVVEEAEKEEEEKLEDLES 172
Query: 192 DDRSDSSDDDWNKNVGK-----EDVSEDEEVDLVDEQ---------------ENKVLRGR 231
+ DS D+DW +NV K EDV ED ++++ +E+ +NK L R
Sbjct: 173 VEDDDSEDEDWEENVDKGVDEGEDVLEDMDLEIEEEEEEEVVVGSRRGKASGKNKAL-SR 231
Query: 232 KRKSSGV--------KKSKS--DGNAVNADFKSPI-----IKPVKIFGSDKLSNGFDNPV 276
KRK+S V K SK+ D +VN +S + +PV ++ DN +
Sbjct: 232 KRKTSDVVKVTPSSSKGSKNVVDKRSVNNKVESAVNGINGKEPVTTNVDCARASNNDNAL 291
Query: 277 MGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
+ ++RF REA+KF FLG +R+D R P D YDPRTLYLPP+FL+ L+ GQ+QWWE
Sbjct: 292 LCGAADRFGQREAEKFPFLGRNRKDVNGRSPEDANYDPRTLYLPPNFLKGLTGGQRQWWE 351
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
FKSKHMDKV+FFKMGKFYEL+EMDAH+GA EL LQYMKGEQPHCGFPE+NFSMNVEKLAR
Sbjct: 352 FKSKHMDKVLFFKMGKFYELYEMDAHIGANELHLQYMKGEQPHCGFPEKNFSMNVEKLAR 411
Query: 397 KGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
KGYRVLVVEQTETPEQLE+RR+EKGSKDKVV+RE+CAVVTKGTLTEGE+L+ANPDASYLM
Sbjct: 412 KGYRVLVVEQTETPEQLEIRRREKGSKDKVVRREVCAVVTKGTLTEGEMLAANPDASYLM 471
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
A+TES Q+ A Q +G+C+VD+ TS+IILGQ DD DCS LCCLLSELRPVE+IKPA
Sbjct: 472 AVTESFQTAAYQQGKHTYGVCMVDITTSKIILGQFEDDSDCSALCCLLSELRPVEVIKPA 531
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA- 575
+LS ETER +LRHTRNPLVN+LVPLSEFWDAE T+ E+K IY +++ L+ + + +
Sbjct: 532 KLLSLETERVMLRHTRNPLVNELVPLSEFWDAERTISEVKRIYRNMSSSPLSSSPNGMGA 591
Query: 576 --NSQAEGDGLT-CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
N+ +E DG LP +L EL++ G++GS LSALGGTL+YLK++FLDE+LL+FAKFEL
Sbjct: 592 HENNTSEEDGQRDFLPDVLYELVNLGENGSYALSALGGTLYYLKQAFLDESLLKFAKFEL 651
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
LP SGF D +KP MVLDA ALENLE+FENSR+GDSSGTLYAQ+NHC+T FGKR+LR+WL
Sbjct: 652 LPLSGFCDSTQKPNMVLDAAALENLEIFENSRNGDSSGTLYAQVNHCMTPFGKRMLRSWL 711
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
ARPLY+ IRERQDAV+GL+G+N PF LEFRK LSRLPDMERLLARLF SSEANGRN+N
Sbjct: 712 ARPLYHPESIRERQDAVSGLKGLNLPFVLEFRKELSRLPDMERLLARLFGSSEANGRNAN 771
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
KV LYEDAAKKQLQEFISAL GCE M +ACSSLG ILENT+S+ L+H+LTPGKGLP + S
Sbjct: 772 KVTLYEDAAKKQLQEFISALRGCESMARACSSLGVILENTDSKLLYHLLTPGKGLPDVDS 831
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
LKHFKDAFDWVEANN GRIIPH GVD +YD+ACK+V E+E L+KHLKEQRKLLGD+SI
Sbjct: 832 FLKHFKDAFDWVEANNLGRIIPHEGVDEEYDTACKQVHEVELKLSKHLKEQRKLLGDSSI 891
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
YVT+GKD Y LEVPE L S+P++YEL+SSKKG+FRYW P +KKLLGE+SQA SEKES
Sbjct: 892 DYVTVGKDAYPLEVPECLCRSIPKEYELQSSKKGYFRYWNPVLKKLLGEVSQASSEKESK 951
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
LKSILQ + +FCEHH+KWR++V TA L +++
Sbjct: 952 LKSILQEVDRRFCEHHDKWRELVRITAELDVLI 984
>gi|357153628|ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Brachypodium
distachyon]
Length = 1318
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/1012 (50%), Positives = 668/1012 (66%), Gaps = 68/1012 (6%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPLV Q QITSFFS + S + + +S P + + + + S
Sbjct: 4 RRLSNGRSPLVRKQSQITSFFSTPSPSSSASKSAAKPTPSPSSTPKSDAKPSPSPSSSAP 63
Query: 65 PSPTTPSPLQSNPKKSRLVI------------------GQTPSPPPSTPAAAKSYGEDVL 106
PSP NPK + + GQ +AA + GE V
Sbjct: 64 KPAAKPSPSPLNPKARKPPLVVPSPSPPKSAPPAPQQQGQDEEKKEQNASAAPA-GEAVG 122
Query: 107 RKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVS---- 162
R R+RVYWPLD AWYEG V +D+ +H V+YDDGEDE +DL KEK EW E +
Sbjct: 123 R-RLRVYWPLDDAWYEGRVDDYDEGSRRHRVKYDDGEDEEVDLRKEKFEWAAEEATPPPA 181
Query: 163 -LLKRLRRDSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNV--------------- 206
L+RLRR S + + + +EDE D + D DW K+
Sbjct: 182 RKLRRLRRMS----DTANAKSLAGLEDEEIGDSPE--DGDWKKDAEEVELDDEEDEAVSS 235
Query: 207 --GKEDVSEDEEVDL--------VDEQENKVLRGRKRKSSGVK--KSKSDGNAVNADFKS 254
GK S + VL+ RK+ G K + K
Sbjct: 236 RKGKSRNSLSMSASTPRSTSGLASTSSGSTVLKKRKKVDVGTLDCAKKFSFQLASTPEKV 295
Query: 255 PIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDP 314
+ P+ G +K+ + G+++ERF R+A+KF FLG R+DAK RRPG YDP
Sbjct: 296 ELKVPMSCDGREKILENAHTVLTGELAERFGQRQAEKFKFLGDGRKDAKGRRPGHPAYDP 355
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK 374
RTL LPP FL NL+ GQ+QWWEFKS+HMDKV+FFKMGKFYEL+EMDAHVGA+ELDLQYMK
Sbjct: 356 RTLSLPPQFLANLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMDAHVGARELDLQYMK 415
Query: 375 GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
G+QPHCGFPE+N S+N+EKLA+KGYRVLVVEQTETP QLELRRKE G+KDKVV+REICA+
Sbjct: 416 GDQPHCGFPEKNLSVNLEKLAQKGYRVLVVEQTETPNQLELRRKETGTKDKVVRREICAM 475
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTD-RCFGICVVDVATSRIILGQVMD 493
VTKGTLTEGE L ANPD SY++++ ES Q + +S D G+C+VDV+TS+ ++GQ D
Sbjct: 476 VTKGTLTEGEFLLANPDPSYILSVAESYQHSSKKSQDGHTIGVCIVDVSTSKFVVGQFQD 535
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
D + VLC +LSE+RPVEIIKPA MLSPETERA+ +TR+PL+NDL+P +EFWDAE T+
Sbjct: 536 DAERHVLCSILSEIRPVEIIKPAKMLSPETERALKNNTRDPLINDLLPSTEFWDAEKTIH 595
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
EI+ Y+ + ++ V N+ + CLP +LSELI GD + LSALGG+LF
Sbjct: 596 EIEQYYSSSDKLTTSQNTPGVQNN------VGCLPALLSELIGAGDR-AYALSALGGSLF 648
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL++ LD+ L+ A+FE L CSG + +K +M+ DA ALENLE+ EN+ +G SGTLY
Sbjct: 649 YLRQVLLDKKLIPCAEFEPLTCSGLLNNTRK-HMIFDAAALENLEILENA-TGGLSGTLY 706
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
AQLNHCVT FGKRLL+ W+ RPLY+S I +RQ A+A +GV A++FRK LSRLPDM
Sbjct: 707 AQLNHCVTGFGKRLLKRWIVRPLYDSKAILQRQGAIAIFKGVGHECAIQFRKDLSRLPDM 766
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERLLARLF+S + NGR+S VVLYED +K+ LQ+F SAL GC+ M QACSS+ +
Sbjct: 767 ERLLARLFSSCDENGRSSKSVVLYEDVSKRLLQQFTSALRGCQQMFQACSSVRMLTGTEG 826
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L+ +L+PGKGLP + SIL HF+DAFDW EA+++GRIIPH G D +YD+ C ++EIE
Sbjct: 827 SCLLNDLLSPGKGLPDVSSILDHFRDAFDWSEADHNGRIIPHEGCDPEYDATCSAIEEIE 886
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+SL ++LKEQR+LL D+S+ YV +GKD YL+EV ESL GSVPR+YEL+S+KKGF+RYWTP
Sbjct: 887 SSLKEYLKEQRELLADSSVKYVDVGKDTYLIEVSESLGGSVPRNYELQSTKKGFYRYWTP 946
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K+L+ ELS+A + KES LK ILQ+LI F EHH+KWRQ+V+ A + +++
Sbjct: 947 EVKELISELSKAAAGKESILKGILQKLIHLFVEHHSKWRQLVSVVAEIDVLI 998
>gi|51091506|dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica
Group]
gi|51091562|dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica
Group]
Length = 1253
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/981 (51%), Positives = 659/981 (67%), Gaps = 73/981 (7%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPL+ Q QIT+FFS SP T PS
Sbjct: 7 RRLSNGRSPLLRKQSQITAFFS---SP----------------------------TAKPS 35
Query: 65 PSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGC 124
PSP NP+ ++ + PPP+ P+ + E + +R+RVYWPLD AWYEG
Sbjct: 36 PSPL-------NPRATKPPLAVPSPPPPNPPSPPQEE-ETAVGRRLRVYWPLDDAWYEGR 87
Query: 125 VKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL---------LKRLRRDSFKKV 175
V+ +D +H V+YDDGE+E++DL E+ EW + L+RLRR S
Sbjct: 88 VEGYDVGSRRHRVRYDDGEEEVVDLASERYEWAAAADEEEVTPQPSRKLRRLRRMSDAAT 147
Query: 176 VVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK- 234
+ + D ++ D+DW + E+ SE+ E+D ++ E +V+ + RK
Sbjct: 148 AKSPGAVDGGGGGDETADSAEEEDEDWKNDAAAENDSEEVELDDEEDDEEEVVAVKTRKG 207
Query: 235 --------SSGVKKSKSDGNAVNADFKSPIIKPVKI-FGSDKLSNGFDNPVMGDVSERFS 285
S+ K S + + + K K+ G L N + G+V+ERF+
Sbjct: 208 KKNNPLSTSASTPKLASGLGSASISGSTLSKKRRKVDAGEQPLENAL-TALTGEVAERFA 266
Query: 286 AREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
R+A+KF FLG R+DAK RRPG+ YDPRTL LP FL +L+ GQ+QWWEFKS+HMDKV
Sbjct: 267 QRQAEKFKFLGEGRKDAKGRRPGNPNYDPRTLSLPSQFLNSLTGGQRQWWEFKSQHMDKV 326
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+FFKMGKFYELFEMDAHVGAKELDLQYMKG++PHCGFPE+NF +N+EKLA+KGYRVLV+E
Sbjct: 327 LFFKMGKFYELFEMDAHVGAKELDLQYMKGDKPHCGFPEKNFELNLEKLAKKGYRVLVIE 386
Query: 406 QTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
QTETPEQL+LRRKE G KDKVV+REICA+VTKGTLTEGE L ANPD SYL ++ ES Q
Sbjct: 387 QTETPEQLDLRRKETGVKDKVVRREICAMVTKGTLTEGESLLANPDPSYLFSVAESYQCG 446
Query: 466 ASQSTD-RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+ + D G+C+VDV+TS+ I+GQ DD + LC +LSE+RP EIIKPA MLSPETE
Sbjct: 447 SEKDQDGHTIGVCIVDVSTSKFIVGQFQDDAERHGLCSILSEIRPAEIIKPAKMLSPETE 506
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+A+ +TR+PL+N+L+P EFWDAE T+ EIK Y + D+ A +Q
Sbjct: 507 KALKSNTRDPLINNLLPSMEFWDAEKTIHEIKQYYCSL--------DTPGAGAQISS--- 555
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
LP +LSELI GD + LSALGG+LFYL++S LDE LL A+FE L CSG + +K
Sbjct: 556 AYLPELLSELIEAGDK-TYALSALGGSLFYLRQSLLDEKLLPCAEFERLTCSGLTNPIRK 614
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
+M+LDA ALENLE+ EN+R+G SGTLYAQLNHCVT FGKRLL+ W+ARPLY I +
Sbjct: 615 -HMILDAAALENLEILENARNGGLSGTLYAQLNHCVTGFGKRLLKRWIARPLYERQAILQ 673
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
RQ A+A +G A++FRK LSRLPDMERLLARLF+S + NGR+S VVLYEDA+K+
Sbjct: 674 RQSAIATFKGSGHECAIQFRKDLSRLPDMERLLARLFSSCDKNGRSSKSVVLYEDASKRL 733
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
L +F +AL GC+ M QACSS+ + S L+ +L+ GKGLP + SIL HF+DAFDW
Sbjct: 734 LHQFTAALRGCQQMFQACSSISMLTSTDGSSLLNDLLSLGKGLPHVSSILDHFRDAFDWS 793
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
EA+ +GRIIPH G D YD+AC ++EIE+SL K+LKEQRKLL D+S+ YV +GKD YLL
Sbjct: 794 EADRNGRIIPHEGCDPQYDAACIAIEEIESSLQKYLKEQRKLLSDSSVKYVDVGKDTYLL 853
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EV E+LRGSVP +YEL+S+KKGF+RYWTP +K+L+ ELS+AE+EKE+ LK ILQ LI F
Sbjct: 854 EVSENLRGSVPHNYELQSTKKGFYRYWTPEVKELISELSKAEAEKEAKLKCILQNLIQLF 913
Query: 945 CEHHNKWRQMVAATAGLTLIL 965
EHH+KWRQ+V+ A L +++
Sbjct: 914 VEHHSKWRQLVSVVAELDVLI 934
>gi|224104179|ref|XP_002333974.1| predicted protein [Populus trichocarpa]
gi|222839403|gb|EEE77740.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 934 bits (2414), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/812 (62%), Positives = 602/812 (74%), Gaps = 77/812 (9%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPT--ISKLNPNKSNSNPNPNPNSNSN 58
MAP ++ +NGRSP+VNPQRQIT+FFSK+ +PSPSP+ +SK KS++ PNPNP+S +
Sbjct: 1 MAPSRKPSNGRSPIVNPQRQITAFFSKTTTPSPSPSPTLSKKQIPKSHTKPNPNPSSRTQ 60
Query: 59 RTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDK 118
S +P+ +QS PKK LVIGQTPSP PS YG++ + +R+RVYWPLDK
Sbjct: 61 SPSSSPTTPSP---VQSKPKKPLLVIGQTPSPSPSKVGV---YGKEAVERRVRVYWPLDK 114
Query: 119 AWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDS--FKKVV 176
+WYEG VKS+D E KHL+QYDD E+ELLDL EKIEWV+ V KRLRR S F+K+V
Sbjct: 115 SWYEGLVKSYDDESKKHLIQYDDSEEELLDLNNEKIEWVEPCVKKFKRLRRGSLGFRKIV 174
Query: 177 VEDDEEMENVEDE-----ISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQE------- 224
+EDDE MENVE + DSSD+DW KN K DVSE+E+VDL+DE+E
Sbjct: 175 LEDDE-MENVEADNGGAGGGSGGDDSSDEDWGKNAEK-DVSEEEDVDLMDEEEADDGKKG 232
Query: 225 -NKVLRGRKRKSSGV-------KKSKSDGNAVNADFKSPIIKPVK--------------- 261
RKRK+SG KK KS G+A + +++PVK
Sbjct: 233 KRGGKDSRKRKASGEGGKLDLGKKGKSGGDASTGGVRVSVVEPVKNKESNFYLDMFVSAV 292
Query: 262 -----IFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRT 316
+ D + NGF+N +M D SERFS REA+KF FLG +RRDAKRRRPGDV YDPRT
Sbjct: 293 AYLHLCYDHDGVFNGFENALMTDASERFSTREAEKFPFLGRERRDAKRRRPGDVDYDPRT 352
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LYLP +F ++L+ GQ+QWWEFKSKHMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKGE
Sbjct: 353 LYLPAEFAKSLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGE 412
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
QPHCGFPE+NFS+NVEKLARKGYRVLVVEQTETPEQLELR KEKGSKDKVVKREICAV+T
Sbjct: 413 QPHCGFPEKNFSLNVEKLARKGYRVLVVEQTETPEQLELRHKEKGSKDKVVKREICAVIT 472
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
KGTLTEGE LSANPDASYLMALTES+QS A+Q +R FG+CVVDV TSRIILGQ DD +
Sbjct: 473 KGTLTEGEFLSANPDASYLMALTESSQSLANQGLERIFGVCVVDVTTSRIILGQFGDDAE 532
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
CS LCCLLSELRPVEI+KPA MLS ETER ++RHTRNPLVN+L PLSEFWDAE TV E+K
Sbjct: 533 CSSLCCLLSELRPVEIVKPAKMLSSETERVMVRHTRNPLVNELAPLSEFWDAERTVQEVK 592
Query: 557 NIYNRI----TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
IY I + LNK D + N +CLP ILSE ++ G++GS LSALGG L
Sbjct: 593 TIYKHIGDLSASGPLNKTDLDTTNLNVGEYRPSCLPSILSEFVNKGENGSLALSALGGAL 652
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+YLK++FLDETLLRFAKFE LPCS F ++AKKPYM+LDA ALENLE+FENSR+GD+SGTL
Sbjct: 653 YYLKQAFLDETLLRFAKFESLPCSDFCEVAKKPYMILDAAALENLEIFENSRNGDTSGTL 712
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR------------------- 713
YAQLNHCVTAFGKRLL+TWLARPLY+ I++RQDAVAGLR
Sbjct: 713 YAQLNHCVTAFGKRLLKTWLARPLYHLESIKDRQDAVAGLRVQGLRAATSSKIAEGQDYF 772
Query: 714 --GVNQPFALEFRKALSRLPDMERLLARLFAS 743
GVNQP LEF+K LS LPD+ERLLAR+F++
Sbjct: 773 QKGVNQPMMLEFQKVLSGLPDIERLLARIFST 804
>gi|125605646|gb|EAZ44682.1| hypothetical protein OsJ_29308 [Oryza sativa Japonica Group]
Length = 1293
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/1012 (50%), Positives = 663/1012 (65%), Gaps = 101/1012 (9%)
Query: 3 PGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPS 62
P R+ NGRSPL+ Q QIT+FFS SPT
Sbjct: 15 PFNRRRNGRSPLLRKQSQITAFFS-------SPT------------------------AK 43
Query: 63 PSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYE 122
PSPSP NP+ ++ + PPP+ P+ + E + +R+RVYWPLD AWYE
Sbjct: 44 PSPSPL-------NPRATKPPLAVPSPPPPNPPSPPQEE-ETAVGRRLRVYWPLDDAWYE 95
Query: 123 GCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL---------LKRLRRDSFK 173
G V+ +D +H V+YDDGE+E++DL E+ EW + L+RLRR S
Sbjct: 96 GRVEGYDVGSRRHRVRYDDGEEEVVDLASERYEWAAAADEEEVTPQPSRKLRRLRRMSDA 155
Query: 174 KVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKR 233
+ + D ++ D+DW + E+ SE+ E+D ++ E +V+ + R
Sbjct: 156 ATAKSPGAVDGGGGGDETADSAEEEDEDWKNDAAAENDSEEVELDDEEDDEEEVVAVKTR 215
Query: 234 K----------------SSGV------------KKSKSDGNAV-----------NADFKS 254
K +SG+ K+ K D A+ N K
Sbjct: 216 KGKKNNPLSTSASTPKLASGLGSASISGSTLSKKRRKVDAGALDCAKKFSFEPANTTGKV 275
Query: 255 PIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDP 314
+ P+ ++ + G+V+ERF+ R+A+KF FLG R+DAK RRPG+ YDP
Sbjct: 276 ELKVPISCSQREQPLENALTALTGEVAERFAQRQAEKFKFLGEGRKDAKGRRPGNPNYDP 335
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK 374
RTL LP FL +L+ GQ+QWWEFKS+HMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMK
Sbjct: 336 RTLSLPSQFLNSLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMK 395
Query: 375 GEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
G++PHCGFPE+NF +N+EKLA+KGYRVLV+EQTETPEQL+LRRKE G KDKVV+REICA+
Sbjct: 396 GDKPHCGFPEKNFELNLEKLAKKGYRVLVIEQTETPEQLDLRRKETGVKDKVVRREICAM 455
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTD-RCFGICVVDVATSRIILGQVMD 493
VTKGTLTEGE L ANPD SYL ++ ES Q + + D G+C+VDV+TS+ I+GQ D
Sbjct: 456 VTKGTLTEGESLLANPDPSYLFSVAESYQCGSEKDQDGHTIGVCIVDVSTSKFIVGQFQD 515
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
D + LC +LSE+RP EIIKPA MLSPETE+A+ +TR+PL+N+L+P EFWDAE T+
Sbjct: 516 DAERHGLCSILSEIRPAEIIKPAKMLSPETEKALKSNTRDPLINNLLPSMEFWDAEKTIH 575
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
EIK Y + D+ A +Q LP +LSELI GD + LSALGG+LF
Sbjct: 576 EIKQYYCSL--------DTPGAGAQISS---AYLPELLSELIEAGDK-TYALSALGGSLF 623
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL++S LDE LL A+FE L CSG + +K +M+LDA ALENLE+ EN+R+G SGTLY
Sbjct: 624 YLRQSLLDEKLLPCAEFERLTCSGLTNPIRK-HMILDAAALENLEILENARNGGLSGTLY 682
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
AQLNHCVT FGKRLL+ W+ARPLY I +RQ A+A +G A++FRK LSRLPDM
Sbjct: 683 AQLNHCVTGFGKRLLKRWIARPLYERQAILQRQSAIATFKGSGHECAIQFRKDLSRLPDM 742
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERLLARLF+S + NGR+S VVLYEDA+K+ L +F +AL GC+ M QACSS+ +
Sbjct: 743 ERLLARLFSSCDKNGRSSKSVVLYEDASKRLLHQFTAALRGCQQMFQACSSISMLTSTDG 802
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L+ +L+ GKGLP + SIL HF+DAFDW EA+ +GRIIPH G D YD+AC ++EIE
Sbjct: 803 SSLLNDLLSLGKGLPHVSSILDHFRDAFDWSEADRNGRIIPHEGCDPQYDAACIAIEEIE 862
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+SL K+LKEQRKLL D+S+ YV +GKD YLLEV E+LRGSVP +YEL+S+KKGF+RYWTP
Sbjct: 863 SSLQKYLKEQRKLLSDSSVKYVDVGKDTYLLEVSENLRGSVPHNYELQSTKKGFYRYWTP 922
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K+L+ ELS+AE+EKE+ LK ILQ LI F EHH+KWRQ+V+ A L +++
Sbjct: 923 EVKELISELSKAEAEKEAKLKCILQNLIQLFVEHHSKWRQLVSVVAELDVLI 974
>gi|326498831|dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1331
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/1026 (48%), Positives = 663/1026 (64%), Gaps = 82/1026 (7%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSK--------------SNSPSPSPTISKLNPNKSNSNPN 50
+R +NGRSPLV Q QIT+FF+ + PSPSP K
Sbjct: 4 RRLSNGRSPLVRKQSQITAFFASPSPSPPPSASTPKPAAEPSPSPLNPKARKPPLVVPSP 63
Query: 51 PNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDV----- 105
S PSPSP P + + PP P K +
Sbjct: 64 SPSASTPKPAAGPSPSPLNPKVRKPPLVVPSPSPPKPSPSPPPQPQQEKKKHDAAAAPAE 123
Query: 106 --LRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVS- 162
+ +R+RVYWPLD AWYEG V+++D +H V+YDDGE+E +DL KEK EW E +
Sbjct: 124 EAVGRRLRVYWPLDDAWYEGTVEAYDGGSRQHHVKYDDGEEEEVDLVKEKFEWAAEEATP 183
Query: 163 ----LLKRLRRDSFKKVVVEDDEEMENVEDEISDDRSDSSDD-DWNKNVGKEDVSEDEEV 217
L+RLRR S D + ++ + +D DS++D DW K+ ED SE+E
Sbjct: 184 PPARKLRRLRRMS-------DTAKAKSPSVQEDEDTGDSTEDEDWKKDAAPEDDSEEEVE 236
Query: 218 DLVDEQENKVLRGRKRKS----------------------SGV----KKSKSDGNAV--- 248
+E+E + RK KS SG K+ K D +
Sbjct: 237 LDDEEEEVVAVSSRKGKSRNSLSSASVSTLGSTPGLGSASSGSTLSKKRKKVDVGTLDCA 296
Query: 249 --------NADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRR 300
N K+ + P +++ + GD+SERF +R+ +KF FLG R+
Sbjct: 297 KKFSFQPANTPEKAEMKVPTSCGTGERILENVHLALTGDLSERFGSRQMEKFTFLGQGRK 356
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
DAK +RPGD YDPRTL+LPP FL+NL+ GQ+QWWEFKS+HMDKV+FFKMGKFYEL+EMD
Sbjct: 357 DAKGKRPGDPAYDPRTLFLPPQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMD 416
Query: 361 AHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK 420
AHVG KEL+LQYMKG+QPHCGFPE+N ++N+EKLA+KGYRVLVVEQTETP+QL+LRR+E
Sbjct: 417 AHVGTKELNLQYMKGDQPHCGFPEKNLAVNLEKLAQKGYRVLVVEQTETPDQLDLRRRET 476
Query: 421 GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTD-RCFGICVV 479
G+KDKVV+REICA+VTKGTLTEGE L ANPD SY++++ ES +++S D G+C++
Sbjct: 477 GTKDKVVRREICAMVTKGTLTEGESLLANPDPSYILSVVESYPCSSTKSQDGHTIGVCII 536
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
DV+TS+ I+GQ DD + VLC +LSE+RPVEIIKPA MLS ETERA+ +TR+PL+N L
Sbjct: 537 DVSTSKFIIGQFQDDPERHVLCSILSEIRPVEIIKPAKMLSAETERALKNNTRDPLINGL 596
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+P +EFWDAE T+ I+ Y+ ++++ V N+ + CLP +L ELI GD
Sbjct: 597 LPSTEFWDAEKTIHVIEQYYSSSNNLTMSRNTVGVQNN------VGCLPDLLGELIEAGD 650
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
+ LSALGG+LFYLK+ LD+ LL AKFE L CSG + +K +M+LDA ALENLE+
Sbjct: 651 R-AYALSALGGSLFYLKQILLDDKLLPCAKFEPLTCSGLINNMQK-HMILDAAALENLEI 708
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
EN+ +G SGTLY QLNHCVT FGKRLL+ W+ RPLY+ I +RQ A+A +GV
Sbjct: 709 LENA-TGGLSGTLYEQLNHCVTGFGKRLLKRWIVRPLYDREAILQRQGAIAIFKGVGHEC 767
Query: 720 ALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
A++FRK L RLPDMERLLA LF+ NGR S V+LYED AK+ LQ+F +AL GC+ M
Sbjct: 768 AMQFRKDLCRLPDMERLLAHLFSRCGENGR-SKSVILYEDTAKRLLQQFTAALRGCQQMF 826
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
QACSS+ A+ S L+ +L+PGKGLP + SIL +F+DAFDW EA+++GRIIP G D
Sbjct: 827 QACSSIRALTGTEGSSLLNDLLSPGKGLPDVSSILDYFRDAFDWSEADHNGRIIPLEGCD 886
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
+YD+ ++EIE++L +LKEQRKLL D+S+ YV +GKD YL+EV +SLRGSVP DYE
Sbjct: 887 PEYDATSCAIEEIESNLQDYLKEQRKLLRDSSVKYVNVGKDTYLIEVSDSLRGSVPSDYE 946
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
L+S+KKG RYWTP +K+L+ ELS+ ++KES LK ILQ+LI F EHH+KWR++V+ A
Sbjct: 947 LQSTKKGVCRYWTPEVKQLISELSKVATDKESILKGILQKLIHLFIEHHSKWRRLVSVAA 1006
Query: 960 GLTLIL 965
+ +++
Sbjct: 1007 EIDVLV 1012
>gi|125563676|gb|EAZ09056.1| hypothetical protein OsI_31317 [Oryza sativa Indica Group]
Length = 1265
Score = 885 bits (2286), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/1011 (49%), Positives = 646/1011 (63%), Gaps = 121/1011 (11%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPL+ Q QIT+FFS SPT PS
Sbjct: 7 RRLSNGRSPLLRKQSQITAFFS-------SPT------------------------AKPS 35
Query: 65 PSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGC 124
PSP NP+ ++ + PPP+ P+ + E + +R+RVYWPLD AWYEG
Sbjct: 36 PSPL-------NPRATKPPLAVPSPPPPNPPSPPQEE-ETAVGRRLRVYWPLDDAWYEGR 87
Query: 125 VKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL---------LKRLRRDSFKKV 175
V+ +D +H V+YDDGE+E++DL E+ EW + L+RLRR S
Sbjct: 88 VEGYDVGSRRHRVRYDDGEEEVVDLASERYEWAAAADEEEVTPQPSRKLRRLRRMSDAAT 147
Query: 176 VVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQEN-----KVLRG 230
+ + D ++ D+DW + E+ SE+ E+D ++ E K +G
Sbjct: 148 AKSPGAVDGGGGGDETADSAEEEDEDWKNDAAAENDSEEVELDDEEDDEEEVVAVKTRKG 207
Query: 231 RKRKS-----------SGV------------KKSKSDGNAVNADFKSPIIKP-------- 259
+K S SG+ K+ K D A++ K P
Sbjct: 208 KKNNSLSMSASTPKLASGLGSVSISGSTLSKKRRKVDAGALDCAKKFSFEPPNTTGKVEL 267
Query: 260 -VKIFGSDK---LSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPR 315
V I S + L N + G+V+ERF+ R+A+KF FLG R+DAK RRPG+ YDPR
Sbjct: 268 KVPISCSQREQPLENAL-TALTGEVAERFAQRQAEKFKFLGEGRKDAKGRRPGNPNYDPR 326
Query: 316 TLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
TL LP FL +L+ GQ MGKFYELFEMDAHVGAKELDLQYMKG
Sbjct: 327 TLSLPSQFLNSLTGGQ------------------MGKFYELFEMDAHVGAKELDLQYMKG 368
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVV 435
++PHCGFPE+NF +N+EKLA+KGYRVLV+EQTETPEQL+LRRKE G KDKVV+REICA+V
Sbjct: 369 DKPHCGFPEKNFELNLEKLAKKGYRVLVIEQTETPEQLDLRRKETGVKDKVVRREICAMV 428
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTD-RCFGICVVDVATSRIILGQVMDD 494
TKGTLTEGE L ANPD SYL ++ ES Q + + D G+C+VDV+TS+ I+GQ DD
Sbjct: 429 TKGTLTEGESLLANPDPSYLFSVAESYQCGSEKDQDGHTIGVCIVDVSTSKFIVGQFQDD 488
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ LC +LSE+RP EIIKPA MLSP TE+A+ +TR+PL+N+L+P EFWDAE T+ E
Sbjct: 489 AERHGLCSILSEIRPAEIIKPAKMLSPGTEKALNSNTRDPLINNLLPSMEFWDAEKTIHE 548
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
IK Y + D+ A +Q LP +LSELI GD + LSALGG+LFY
Sbjct: 549 IKQYYCSL--------DTPGAGAQISS---AYLPELLSELIEAGDK-TYALSALGGSLFY 596
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
L++S LDE LL A+FE L CSG + +K +M+LDA ALENLE+ EN+R+G SGTLYA
Sbjct: 597 LRQSLLDEKLLPCAEFERLTCSGLTNPIRK-HMILDAAALENLEILENARNGGLSGTLYA 655
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
QLNHCVT FGKRLL+ W+ARPLY I +RQ A+A +G A++FRK LSRLPDME
Sbjct: 656 QLNHCVTGFGKRLLKRWIARPLYERQAILQRQSAIATFKGSGHECAIQFRKDLSRLPDME 715
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RLLARLF+S + NGR+S VVLYEDA+K+ L +F +AL GC+ M QACSS+ + S
Sbjct: 716 RLLARLFSSCDKNGRSSKSVVLYEDASKRLLHQFTAALRGCQQMFQACSSISMLTSTDGS 775
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
L+++L+PGKGLP + SIL HF+DAFDW EA+ +GRIIPH G D YD+AC ++EIE+
Sbjct: 776 SLLNNLLSPGKGLPHVSSILDHFRDAFDWSEADRNGRIIPHEGCDPQYDAACIAIEEIES 835
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
SL K+LKEQRKLL D+S+ YV +GKD YLLEV E+LRGSVP+ YEL+S+KKGF+RYWTP
Sbjct: 836 SLKKYLKEQRKLLSDSSVKYVDVGKDTYLLEVSENLRGSVPQHYELQSTKKGFYRYWTPE 895
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K+L+ ELS+AE+EKE+ LK ILQ LI F HH+KWRQ+V+ A L +++
Sbjct: 896 VKELISELSKAEAEKEAKLKCILQNLIQLFVGHHSKWRQLVSVVAELDVLI 946
>gi|224100189|ref|XP_002311781.1| predicted protein [Populus trichocarpa]
gi|222851601|gb|EEE89148.1| predicted protein [Populus trichocarpa]
Length = 931
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/663 (66%), Positives = 508/663 (76%), Gaps = 58/663 (8%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMN 390
Q+Q WEFKSKHMDKV+FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPE+NFS+N
Sbjct: 133 QRQRWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSLN 192
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV+TKGTLTEGELLSANP
Sbjct: 193 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVITKGTLTEGELLSANP 252
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
DASYLMALTES QS A+Q +R FG+C VDV TSRIILGQ DD +CS LCCLLSELRPV
Sbjct: 253 DASYLMALTESRQSLANQGLERIFGVCAVDVTTSRIILGQFGDDAECSSLCCLLSELRPV 312
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI----TAES 566
EI+KPA MLS ETER ++RHTRNPLVN+L PLSEFWDA+ TV E+K IY I +
Sbjct: 313 EIVKPAKMLSSETERVMVRHTRNPLVNELAPLSEFWDADKTVQEVKTIYKPIGDLSASGP 372
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
LNK D + N +CLP ILSE ++ G++GS LSALGG L+YLK++FLDETLLR
Sbjct: 373 LNKTDLDTTNLNVGEYRPSCLPSILSEFVNKGENGSPALSALGGALYYLKQAFLDETLLR 432
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
FAKF LPCS F + A A+E+L K
Sbjct: 433 FAKFNSLPCSDFCEDA--------VCAIESL----------------------CDGIWKE 462
Query: 687 LLRTWLARPLYNSGLIRERQDAVAG---------LRGVNQPFALEFRKALSRLPDMERLL 737
+ TWLARPL + I++RQDAVA + QP +EF+K LSRLPD+E+LL
Sbjct: 463 VAETWLARPLCHLESIKDRQDAVAANCCSSLHSDIIANFQPMMVEFQKVLSRLPDIEQLL 522
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
AR+F++SEANGRN+NKVVLYEDAAKKQLQEFISAL GCEL+ QACSSL +LE+ ES +L
Sbjct: 523 ARIFSTSEANGRNANKVVLYEDAAKKQLQEFISALRGCELVAQACSSLAVMLESVESGRL 582
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
HH+LTPGK LP I+ ILKHFK AFDWVEANNSGRIIPH GVD++YD AC+KVKE+E+SL
Sbjct: 583 HHLLTPGKDLPDILPILKHFKSAFDWVEANNSGRIIPHEGVDVEYDPACEKVKEVESSLA 642
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE-LRSSKK----------- 905
+HLKEQ+KLLGD SITYVT+GK+ YLLEVPE LRGS+P+DYE LRSSKK
Sbjct: 643 RHLKEQQKLLGDKSITYVTVGKEAYLLEVPEHLRGSIPQDYELLRSSKKIGSVSASMPIK 702
Query: 906 ---GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLT 962
P+IKK LGELSQ ESEKESALKSILQRLI +FC++H+KWRQ+V+ATA L
Sbjct: 703 AGRASTGIGLPSIKKFLGELSQVESEKESALKSILQRLIVRFCKYHDKWRQLVSATAELD 762
Query: 963 LIL 965
+++
Sbjct: 763 VLI 765
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 79/107 (73%), Gaps = 6/107 (5%)
Query: 83 VIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDG 142
VIGQTPSP PST YG++V+ +R+R YWPLDK+W+EG VKS D E KHL+QYDD
Sbjct: 10 VIGQTPSPSPSTIGV---YGKEVVERRVRFYWPLDKSWFEGRVKSCDDESKKHLIQYDDS 66
Query: 143 EDELLDLGKEKIEWVQESVSLLKRLRRDS--FKKVVVEDDEEMENVE 187
E+ELLDL EKIEWV+ KRLRR S F K+V+EDD EMENVE
Sbjct: 67 EEELLDLSNEKIEWVEPCFKKFKRLRRGSLGFWKIVLEDD-EMENVE 112
>gi|414885370|tpg|DAA61384.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
gi|414885371|tpg|DAA61385.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
Length = 762
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/782 (51%), Positives = 511/782 (65%), Gaps = 71/782 (9%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
+R +NGRSPLV Q QIT+FFS + S P+ S P+P+P + S RT SP
Sbjct: 4 RRASNGRSPLVRKQSQITAFFSSPTP-----SPSPSGPSPGASKPSPSPLNPSARTRSPL 58
Query: 65 PSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGC 124
+ + SP P++ + + + + A + E V+ + +RVYWPLD AWY+G
Sbjct: 59 AAVSPSSPKLPQPQQKQKEVKKVKEEHDAALVPAPAAAE-VVGRCLRVYWPLDDAWYKGK 117
Query: 125 VKSFDKECNKHLVQYDDGEDELLDLGKEKIEW---VQESVSL----LKRLRRDSFKKVVV 177
V+++D +H V+YDDG++E +DL KEK EW V+ES L L+RLRR S
Sbjct: 118 VEAYDAASRRHRVKYDDGDEEEVDLRKEKFEWAAVVEESTLLPARKLRRLRRMS------ 171
Query: 178 EDDEEMENVEDEISDDRSDSSDD-DWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK-- 234
D + E D DS++D DW ++ ED SE+ E+D DE+E +R RKR
Sbjct: 172 --DISVAKSPAEAEDGAGDSTEDEDWKRDTVVEDASEEVELDEEDEEEVVAVRSRKRNPK 229
Query: 235 ------------SSGV------KKSKSDGN---------------AVNADFKSPIIKPVK 261
SG+ + SK N AVN + K P+
Sbjct: 230 NSLMSGSTPSTLGSGLTSESEPRISKRRKNVDVASLDFAKRFTFEAVNTNRKVDPEVPMS 289
Query: 262 IFGSDKLSNGFDNPV-MGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLP 320
G + G D GD +ERF R+A+KF FLG R+DAK RRPG+ +DPRTL LP
Sbjct: 290 C-GQKGQTTGNDYTAPTGDAAERFGQRDAEKFKFLGEGRKDAKGRRPGNPGFDPRTLLLP 348
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC 380
P FL+NL+ GQ+QWWEFKS+HMDKV+FFKMGKFYELFEMDAHVGAK+LDLQYMKGEQPHC
Sbjct: 349 PQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKDLDLQYMKGEQPHC 408
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
GFPE+N S+N+EKLA KGYRVLVVEQTETP+QLELRRKE G KDKVV+REICAVVTKGTL
Sbjct: 409 GFPEKNLSVNLEKLAEKGYRVLVVEQTETPDQLELRRKEMGIKDKVVRREICAVVTKGTL 468
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSV 499
EGE L ANPD SYL+++TES Q ++S D C G+ +VDV+TS+ I+GQ DD +
Sbjct: 469 IEGEHLLANPDPSYLLSVTESYQRSPNKSQDTCTIGVSIVDVSTSKFIVGQFQDDPERHG 528
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
LC +LSE+RPVEIIKP+ MLSPETE+A+ +TR PL+N+LVP +EFWDAE T+ EIK Y
Sbjct: 529 LCSILSEMRPVEIIKPSKMLSPETEKALNNNTRKPLINELVPSTEFWDAEKTIDEIKQYY 588
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ +A KAD D + CLP +L ELI GD + LSALGG+LFYL+++
Sbjct: 589 S--SANKQKKADDI-------QDCVDCLPNLLRELIGAGDK-TYALSALGGSLFYLRQTL 638
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LDE +L A+FE L CSGF + +K +M+LD ALENLE+ EN+R+G SGTLYAQLNHC
Sbjct: 639 LDEKILPCAEFEPLACSGFINNIRK-HMILDTAALENLELLENTRTGGLSGTLYAQLNHC 697
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT FGKRLL+ W+A+PLY+ I RQ AVA +GV Q A +FRK LSRLPDMERLLAR
Sbjct: 698 VTGFGKRLLKRWIAKPLYDRREILRRQSAVATFKGVGQDCAAQFRKDLSRLPDMERLLAR 757
Query: 740 LF 741
LF
Sbjct: 758 LF 759
>gi|302799426|ref|XP_002981472.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
gi|300151012|gb|EFJ17660.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
Length = 975
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/703 (49%), Positives = 470/703 (66%), Gaps = 41/703 (5%)
Query: 278 GDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
G+ ERF R + KF FLG +R+D+ RR +D RTL+LP +F++ L+ GQ+QWWEF
Sbjct: 3 GEALERFGGRISRKFSFLGKNRKDSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWWEF 62
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARK 397
K+KHMDKV+ FKMGKFYE+FEMDAHVGA++LDLQYMKGEQPHCGFPE+N+ NVEKL RK
Sbjct: 63 KAKHMDKVLLFKMGKFYEMFEMDAHVGAQDLDLQYMKGEQPHCGFPEKNYFENVEKLVRK 122
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
G+RVLVVEQTETPEQLE R+++ GSKDKVV+REICA++TKGT+ + ++S N + S+L A
Sbjct: 123 GHRVLVVEQTETPEQLEERKRKTGSKDKVVRREICAIITKGTMVDSGMISDNAEPSFLAA 182
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+TE A G+CVVD + + +LGQV DD + L +L+ELRPVE++ P
Sbjct: 183 VTEK----ADNYGGSLVGLCVVDASRALFMLGQVEDDSARTKLRSILTELRPVELVLPLG 238
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANS 577
+L+ T++A+ TR PL++ LVP EFWDAE T EI+ Y S+V
Sbjct: 239 LLTDATQKALREQTRKPLISQLVPSKEFWDAEQTTKEIRTSY----------GASDV--- 285
Query: 578 QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS- 636
+P +L +++ G S VLSA GG + YL++S LD LL+ +FELLP S
Sbjct: 286 ---------MPTVLQKILELGVSSEPVLSAFGGCICYLRQSLLDGQLLQLGRFELLPGSD 336
Query: 637 -GFGDMAKKP-----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
F A P +MVLD+ AL+NLE+ ENS + +GTL L+HC+T FG+RLL+
Sbjct: 337 LSFEHSAAIPEAAEAHMVLDSAALDNLEILENSSNCGVAGTLLCLLDHCITPFGRRLLKQ 396
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RPL N I +RQ+AV ++GV + EFR+ LS +PD+ERLLARL A+S NGR+
Sbjct: 397 WIVRPLCNIESIVQRQNAVVDMQGVAENAVSEFRRELSGIPDLERLLARLSANSGENGRH 456
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
S KVVLYEDAAKKQ++E ++AL G + + +A S G L +S +L +LT GKG P +
Sbjct: 457 SQKVVLYEDAAKKQIKELVAALRGFQKLVKAVSCFGNCLPQLKSARLRSLLTFGKGFPDL 516
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
+L++F+D+FDW E+ +GR+ G D SA +++E+ +LK Q+K +
Sbjct: 517 KPLLQYFEDSFDWSESEANGRVT---GGDHSNLSASDPREKLES----YLKSQQKFFKNP 569
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I+YVT+GKD YLLE+PE L VP DYELRSS+KGF RYWTP +K+LL ELS E+EKE
Sbjct: 570 EISYVTVGKDTYLLEIPEELHTKVPSDYELRSSRKGFCRYWTPRVKELLQELSLCENEKE 629
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGL-TLILLDGSLLH 972
+AL+ ILQ L +FC+ H+ W + A + L L+ + + LH
Sbjct: 630 AALRGILQTLTKRFCDDHDHWLSAIRAVSELDALMSISSARLH 672
>gi|302773165|ref|XP_002970000.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
gi|300162511|gb|EFJ29124.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
Length = 1232
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/705 (48%), Positives = 468/705 (66%), Gaps = 43/705 (6%)
Query: 278 GDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
G+ ERF R + KF FLG +R+D+ RR +D RTL+LP +F++ L+ GQ+QWWEF
Sbjct: 235 GEALERFGGRISRKFSFLGKNRKDSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWWEF 294
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARK 397
K+KHMDKV+ FKMGKFYE+FEMDAHVGA++LDLQYMKGEQPHCGFPE+N+ NVEKL RK
Sbjct: 295 KAKHMDKVLLFKMGKFYEMFEMDAHVGAQDLDLQYMKGEQPHCGFPEKNYFENVEKLVRK 354
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
G+RVLVVEQTETPEQLE R+++ GSKDKVV+REICA++TKGT+ + ++S N + S+L A
Sbjct: 355 GHRVLVVEQTETPEQLEERKRKTGSKDKVVRREICAIITKGTMVDSGMISDNAEPSFLAA 414
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+TE + S G+CVVD + + +LGQV DD + L +L+ELRPVE++ P
Sbjct: 415 VTEKADNYGSS----LVGLCVVDASRALFMLGQVEDDSARTKLRSILTELRPVELVLPLG 470
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANS 577
+L+ T++A+ TR PL++ LVP EFWDAE T EI+ Y A
Sbjct: 471 LLTDATQKALREQTRKPLISQLVPSKEFWDAEQTTKEIRTSYGASDA------------- 517
Query: 578 QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS- 636
+P +L +++ G S VLSA GG + YL++S LD LL+ +FELLP S
Sbjct: 518 ---------MPTVLQKILELGVSSEPVLSAFGGCICYLRQSLLDGQLLQLGRFELLPGSD 568
Query: 637 -GFGDMAKKP-------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
F A P +MVLD+ AL+NLE+ ENS + +GTL L+HC+T FG+RLL
Sbjct: 569 LSFEHSAAIPEADPAEAHMVLDSAALDNLEILENSSNCGVAGTLLCLLDHCITPFGRRLL 628
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ W+ RPL N I +RQ+AV ++GV + EFR+ L +PD+ERLLARL A+S NG
Sbjct: 629 KQWIVRPLCNIESIVQRQNAVVDMQGVAENAVSEFRRELFGIPDLERLLARLSANSGENG 688
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
R+S KVVLYEDAAKKQ++E ++AL G + + +A S G L +S +L +LT GKG P
Sbjct: 689 RHSQKVVLYEDAAKKQIKELVAALRGFQKLVKAVSCFGNCLPQLKSARLRSLLTFGKGFP 748
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
+ +L++F+D+FDW E+ +GR+ G D SA +++E+ +LK Q+K
Sbjct: 749 DLKPLLQYFEDSFDWSESEANGRVT---GGDHSNLSASDPREKLES----YLKSQQKFFK 801
Query: 869 DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+ I+YVT+GKD YLLE+PE L VP DYELRSS+KGF RYWTP +K+LL ELS E+E
Sbjct: 802 NPEISYVTVGKDTYLLEIPEELHTKVPSDYELRSSRKGFCRYWTPRVKELLQELSLCENE 861
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAGL-TLILLDGSLLH 972
KE+AL+ ILQ L +FC+ H+ W + A + L L+ + + LH
Sbjct: 862 KEAALRGILQTLTKRFCDDHDHWLSAIRAVSELDALMSISSARLH 906
>gi|384246687|gb|EIE20176.1| hypothetical protein COCSUDRAFT_18682, partial [Coccomyxa
subellipsoidea C-169]
Length = 1204
Score = 507 bits (1305), Expect = e-140, Method: Compositional matrix adjust.
Identities = 341/920 (37%), Positives = 490/920 (53%), Gaps = 97/920 (10%)
Query: 97 AAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEW 156
+ K +G++++ R +V+W DK WY+G + D KHLV+Y+DGE E LDL +EK E
Sbjct: 12 SGKGHGKEIVGLRCQVFWADDKTWYKGDITQHDATKGKHLVEYEDGETEWLDLSQEKFEL 71
Query: 157 VQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEISDDRSD-SSDDDWNKNVGKEDVSEDE 215
+Q+S LKRL + +KV++ D+ EDE + D S D+ ++ V + SE +
Sbjct: 72 LQKSGRPLKRLVK---RKVILSSDD-----EDEAAAAPMDMSGDESGSEFVADKASSESD 123
Query: 216 EVDLVDEQENKVLRGRKRKSSGVKKSKSDG----NAVNADFKSPI----IKPVKIFGSDK 267
D D+ ++ KR++ K + A FK+P I P GS +
Sbjct: 124 SDDSADDAASEEDEAPKRRTPAKKAASKSAAKPDTAQKQVFKTPATAPRIAPTFAQGSAQ 183
Query: 268 -------LSNGFDNPVMG------DVS-----ERFSAREADKFHFLGPDR-RDAKRRRPG 308
+ + P DV R++ R D+F FL P RDA R+RPG
Sbjct: 184 HKGSGTAMRAALNTPATAAKGGADDVEPASDMARYAKRAEDRFPFLSPQEIRDATRKRPG 243
Query: 309 DVYYDPRTLYLPPDFLRN--LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAK 366
Y+PRTLY+P D+ + +SEGQ+QWWEFK++H D V+ FKMGKFYE+FEMDAHVGA+
Sbjct: 244 QPGYNPRTLYIPHDWFKKAKVSEGQRQWWEFKAQHFDSVMLFKMGKFYEMFEMDAHVGAE 303
Query: 367 ELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR---RKEKGSK 423
L L YMKGEQPHCGFPE N+ M+ E+L R G RV+VVEQTETP+ L +R R +K
Sbjct: 304 VLGLTYMKGEQPHCGFPEVNYLMHAERLVRAGLRVVVVEQTETPDMLRIRNDNRPAGQAK 363
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDR--CFGICVVDV 481
VV+RE+ A++T GTL + ++L P+A+Y+++L E P + + G C D
Sbjct: 364 CNVVRREVVAILTTGTLADPDMLRTQPEAAYVLSLWERPAPPVAPGGPQRTLLGACYADC 423
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL-V 540
A++ + LGQ DDL S L L+E+RP E++ PA LS T+R + R P N L
Sbjct: 424 ASNTLTLGQWHDDLTRSQLRAQLAEMRPSELVLPAGGLSEATQRVLKAALRGPRTNRLAA 483
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS-------E 593
P S A+ +++ D+ D +C G+ +
Sbjct: 484 PAS-------------------AADVIHELDTR--------DYFSCAAGMEAGSRDAWPS 516
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP-CSGFGDMAKKP----YMV 648
L+ L ALG +L++ LD +L F LP C+ P ++
Sbjct: 517 LLKEPAEAEAALLALGLARRHLQEVLLDGRVLPLGAFRPLPGCARVAGADAAPDAPRFVA 576
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
LD A +NLEV EN+ G S+G+L A L+ C T GKR LR WL RP+ I RQD
Sbjct: 577 LDGSAFDNLEVLENTEGG-SAGSLVACLDMCTTVMGKRQLRAWLCRPMARIADITARQD- 634
Query: 709 VAGLRGVN---QPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQL 765
AGL V P + + L RL D+ER LARL AS+ A G +N + YED AK+++
Sbjct: 635 -AGLVPVIVLLAPASPARARELFRLGDLERALARLQASTLAEGEGTNAAIYYEDTAKRKV 693
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVE 825
I+AL G + + Q S LG S +L LT G + LK + DW +
Sbjct: 694 LSLITALRGLQSVQQMGSELG-------SEELRR-LTMGPAAAGMARPLKELQAFTDWEQ 745
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLE 885
A GR+IPH G + +D+A +V +EA +HLKE +K LG +SI+YV++ KD +LL+
Sbjct: 746 AAELGRVIPHPGAEAAFDNADARVAAVEAEFEQHLKEVKKKLGCSSISYVSVNKDSHLLD 805
Query: 886 VPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFC 945
+P+S GSVP YEL KKG+ RY +P L+ + + A+ E+E+AL +ILQ ++ +F
Sbjct: 806 IPDSAAGSVPSSYELVGQKKGWKRYRSPRSADLVRDHTAAQEEREAALSTILQGVVRRFA 865
Query: 946 EHHNKWRQMVAATAGLTLIL 965
H W V A A L ++
Sbjct: 866 REHAVWEAAVEAMAELDALM 885
>gi|298710503|emb|CBJ25567.1| MutS protein homolog 6 [Ectocarpus siliculosus]
Length = 1372
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 344/1029 (33%), Positives = 492/1029 (47%), Gaps = 157/1029 (15%)
Query: 75 SNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNK 134
+ PK S TPS ++P E +L KRI+V+W D WY G V + E K
Sbjct: 48 TKPKPSHAT---TPSTAGASPEQPSKDSEKLLGKRIKVFWRDDNNWYFGKVIDY-YEDGK 103
Query: 135 HLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEISDD 193
HL+ YDDG+ E L L EK E +E + + KV+ +DD+ E E +DE+ D
Sbjct: 104 HLIHYDDGDKEKLVLKNEKFELAREVNESEPKPPKKKRAKVIQDDDDDEAEWNQDELEDS 163
Query: 194 RSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK----------------SSG 237
D D +N G E SE+++ + D RG+K SG
Sbjct: 164 GGD--DGSAYENEGNE--SENDDAESDDSDAPVTPRGKKSTPSKKKRSGQAAPSGPGGSG 219
Query: 238 VKKSK----------------------SDGNAVNADFKSPIIKPVKIFGSDKLSN---GF 272
K+ K + GNA +SP+ P + S S G
Sbjct: 220 AKRLKKASDLASYAITDTVSPGSGARGATGNASGRSLQSPVSTPT-VRSSPHSSRPFVGL 278
Query: 273 DNPVMGDVSERFSA------------READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLP 320
+P + + F +L +R DA RRRP D Y+PRTLY+P
Sbjct: 279 SSPASPPTPKAPAGIPLPEGVLDTGRHSHHSFDWLYKNRVDANRRRPDDPLYNPRTLYVP 338
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC 380
P FL + QWW+FKS++MD V+FFK+GKFYELF +DA VG +ELDL YMKGE+ H
Sbjct: 339 PSFLSKETPAMVQWWKFKSQNMDTVLFFKVGKFYELFHVDADVGMQELDLIYMKGEKAHS 398
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVKREICAVVTK 437
GFPE ++ + L KGYRV VEQ ETP+ L+ R G+KDKVVKRE+C+++++
Sbjct: 399 GFPEISYGKFADGLVSKGYRVARVEQVETPDMLKARNASVGRNGTKDKVVKRELCSILSR 458
Query: 438 GTLTEGEL--LSANPDAS-----YLMALTESN---------QSPASQSTDR-----C-FG 475
GT T L +S+ PD S ++++ E+ SP S D C +G
Sbjct: 459 GTRTYCFLDDVSSTPDGSPRSVNMILSIKETAVDALSEFDPGSPGSADADGPPAAVCEYG 518
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
+C+VD T+ LGQ DD S L LL++ PVEI+ + LS T I PL
Sbjct: 519 VCMVDATTATFSLGQFADDPARSRLRTLLAQQLPVEIVMEKDNLSETTLHMI--KCMAPL 576
Query: 536 VNDLV--PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG----LTCLPG 589
+ + +EFWDA TV E+KN + +SN + GDG + P
Sbjct: 577 ASHMTLHKGTEFWDASRTVQELKN-------RRYFRNESNAKEKSSAGDGKGSNVEDWPP 629
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL----------------- 632
IL ++ G G+ LSALGG ++ +++ +D LL +F
Sbjct: 630 ILRAVVEGGKDGALALSALGGATWHTRRALIDHDLLSMRRFVAYIPSDMKQPDSNAAPST 689
Query: 633 ---------LPCSGF--GDMAKKP---YMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
LP + G A+ P +MVLD +L NLEV NS G G+L+A +N
Sbjct: 690 PNDSQEAGDLPSASSLPGSSAQTPSQSHMVLDGVSLSNLEVLRNSSDGGEKGSLWAFVNR 749
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
C TAFG+RLL+ W+ +PL I R DAV+ L G P A R L +LPD+ERLL+
Sbjct: 750 CSTAFGRRLLKDWVLKPLLFPTHINGRLDAVSELAGDLSPEADASRALLKKLPDVERLLS 809
Query: 739 RLFASSEANGRNS----NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSL-GAILEN 791
R+ S + R+S ++ ++YED + +++ +F+S L G E D+ A +E+
Sbjct: 810 RVH-SMASKHRSSEHPESRAIMYEDTKYSIRKVNDFLSVLDGLEKADRLPEIFKSASVES 868
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS------- 844
R+ + G P + S + +F++AFD + G I GVD D+D
Sbjct: 869 ALLRKCVISKSEGGQFPDMSSAISYFRNAFDAGTSKKKGLIELKPGVDEDFDKIKPRGRY 928
Query: 845 ------ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPR 896
A +KEI++ L HL+EQRK LG + Y K+ Y ++VPE + P
Sbjct: 929 FVWPVLAQIDIKEIKSELDGHLREQRKRLGCSDAEYWHSAKEKYQIQVPERYFSKNRQPS 988
Query: 897 DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVA 956
DYEL+S KKG R+WTP IK L +L+ AE A + ++ L +F EH W V
Sbjct: 989 DYELKSKKKGALRFWTPFIKDHLEQLAAAEQRLGDAQRDQMRGLFAKFDEHRELWASTVR 1048
Query: 957 ATAGLTLIL 965
+ L +L
Sbjct: 1049 CLSHLDAVL 1057
>gi|302843362|ref|XP_002953223.1| hypothetical protein VOLCADRAFT_105835 [Volvox carteri f.
nagariensis]
gi|300261610|gb|EFJ45822.1| hypothetical protein VOLCADRAFT_105835 [Volvox carteri f.
nagariensis]
Length = 1515
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 287/784 (36%), Positives = 421/784 (53%), Gaps = 82/784 (10%)
Query: 259 PVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTL 317
P K G +L+ G + G+ + RF+ R A +F FL PD RDA +RRP YDPRTL
Sbjct: 355 PSKSQGGSELTLGVAASMEGEAA-RFADRMAVRFSFLHPDNIRDANQRRPDHPEYDPRTL 413
Query: 318 YLPPDFLR--NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
Y+PP + + +SEGQ+QWW FK+ + D V+ FKMGKFYE+FEMDA+VG + L L +M+G
Sbjct: 414 YIPPGWFKEFKISEGQQQWWNFKAHNFDSVLLFKMGKFYEMFEMDAYVGVEVLGLTFMRG 473
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQ----TETPEQL----ELRRKEKGSKDKVV 427
EQPH GFPE ++ E LAR GYRV+VVEQ TETPE L E RR + + VV
Sbjct: 474 EQPHAGFPEVKYADMAESLARAGYRVVVVEQVMKGTETPEMLAKRNEQRRMQGKKQANVV 533
Query: 428 KREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRC-------FGICVVD 480
R+ AV+++GTL + E++++ PDASY++A+ E + Q G+C VD
Sbjct: 534 DRQKVAVLSRGTLVDAEMVASRPDASYVLAVAEMDVGGDEQEAAADKAAGAVRIGLCAVD 593
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV 540
A+ ++++G+ +DD S L L+ L+P E++ P LS T + R+P VN +
Sbjct: 594 AASGQVLVGEFVDDEVRSTLRTQLTALQPQELVLPRKALSATTSHVLRNGVRDPRVNSMR 653
Query: 541 PLSEFWDAETTVLEIKN-----------------------IYNRITAESLN--------K 569
+ W AE T +++ Y T+E +
Sbjct: 654 GPAGDWSAEKTYRALRDAEYFTASSAAPAATSSPAAAQGGAYG--TSEDMEVDGCGQGAA 711
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
A +S+ + D P +L ++S G S ++ALGG + +LK S LD +L
Sbjct: 712 APGATRSSRPDVDPSKRWPQLLRRIVSDGVSSRPAAMAALGGMIAFLKDSLLDRAVLPLG 771
Query: 629 KFELLPC-------SGFGD--------MAKKP-YMVLDAPALENLEVFENSRSGDSSGTL 672
+FE LP +G G+ A+ P YM L+ ALENLE+ ENS G S+GTL
Sbjct: 772 RFEELPALVASRGSAGAGEDSSGADVAGAEGPLYMALNGAALENLEILENS-DGGSAGTL 830
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
+ L++C T FG+R LR WL RPL I+ RQDAVA L G + RK L+ + D
Sbjct: 831 LSVLDNCATPFGRRRLRQWLCRPLGRIPDIQARQDAVAQLCGELAEAVGQARKLLASVSD 890
Query: 733 MERLLARLFAS--SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL-GAIL 789
+ER +ARL AS S A+GR++ VVLYEDA K+++ S L A S L A+
Sbjct: 891 LERAVARLHASTVSGASGRDAANVVLYEDAGKRRVAALTSVLKDLRAAHGALSRLREAMQ 950
Query: 790 ENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDWVEANNSGRIIPH-------GGVDMD 841
+L + + PA + S L+ + A DW EA +GR +P GGVD +
Sbjct: 951 GGGGGSELLRRIVFDRCRPAEVSSALEALEGATDWKEAAATGRAVPEQVAGVGVGGVDEE 1010
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
YD+A + V +E + +LKE R+ G + V++ KD +L+EVP+S+ G + ++ L
Sbjct: 1011 YDAAMEAVDTVERKMQDYLKELRQRFG-RDVNLVSVNKDSHLVEVPDSVAGKLGGEFHLV 1069
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
++KG+ R+ +K L+ +L + KE+ L SIL RL+ +F H W +V A A L
Sbjct: 1070 GNRKGYKRFTGNRLKALVADLDRVMERKEAVLSSILTRLLVKFVSHKALWVAVVEAVADL 1129
Query: 962 TLIL 965
++
Sbjct: 1130 DALM 1133
>gi|449275264|gb|EMC84167.1| DNA mismatch repair protein Msh6, partial [Columba livia]
Length = 1247
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 266/742 (35%), Positives = 403/742 (54%), Gaps = 58/742 (7%)
Query: 281 SERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
S F+ E +K +L ++DA RRR D YDP TLY+P D+L + G ++WW+ KS
Sbjct: 274 SSGFAVWEHEKLEWLQEGKKKDAHRRRQNDPAYDPGTLYVPEDYLNKCTPGMRRWWQLKS 333
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY
Sbjct: 334 QNFDAVICYKVGKFYELYHMDAVIGVNELGLIFMKGTWAHSGFPETAFGRFSDVLVQKGY 393
Query: 400 RVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPD---AS 453
+V VEQTETPE +E R K DKVV+REIC ++TKGT T +L +P +
Sbjct: 394 KVARVEQTETPEMMEARCKSAAHPTKFDKVVRREICRIITKGTQTYS-ILDCDPSENHSK 452
Query: 454 YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
YL+ + E +S S R +G+C VD + + +GQ DD CS L++ PV+++
Sbjct: 453 YLLCVKEKEES----SGQRVYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLVAHYTPVQVL 508
Query: 514 KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKA 570
LS +T++ + + L+ S+FW+A T +LE + + +E+
Sbjct: 509 YEKGNLSVDTQKILKGSLVSCFQEGLISGSQFWNASKTLKVLLEEEYFKEKQNSENGCSL 568
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ + +E D L PG SEL LSALGG +FYLKK +D+ LL A F
Sbjct: 569 PPVIKSLTSESDSLGLTPGENSEL---------ALSALGGCVFYLKKCLIDQELLSLANF 619
Query: 631 -ELLPCSGFGDMAKK-----------PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E +P D AK MVLD L NLEV +N +G + GTL +++
Sbjct: 620 EEYVPVD--IDTAKTISSRSFFVKTDQRMVLDGVTLMNLEVLQNGTNGTTEGTLLERIDS 677
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
C T FGKRLL+ WL PL N I +R DAV L V + E + L +LPD+ERLL+
Sbjct: 678 CCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPHKMS-EVSEHLKKLPDLERLLS 736
Query: 739 RLFASS---EANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTE 793
++ + ++ ++ + YE+ +KK++ +F+SAL G ++M++ + + + +
Sbjct: 737 KIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGFKVMNEIVDVMEEVASDFK 796
Query: 794 SRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
S L ++T P P + + LK + AFD +A +G I P G D DYD A +
Sbjct: 797 SEVLKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKALQD 856
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGF 907
+K +E L K+L +QRKLLG S+ Y GK+ Y +E+PES + ++P +YEL+SS+KG+
Sbjct: 857 IKAVEEDLHKYLDKQRKLLGFKSVLYWGAGKNRYQMEIPESVISRNLPEEYELKSSRKGY 916
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILL- 966
RYWT I+++L + AE +++ALK ++RL F ++ W+ V A L +++
Sbjct: 917 KRYWTKEIERMLAAMVNAEERRDAALKDCMRRLFYNFDQNSKDWQTAVECIAVLDVLMSL 976
Query: 967 -------DGSLLHAFLILQSNS 981
DG L ++L +S
Sbjct: 977 ANYSQDGDGPLCRPVILLPVDS 998
>gi|6754744|ref|NP_034960.1| DNA mismatch repair protein Msh6 [Mus musculus]
gi|341940990|sp|P54276.3|MSH6_MOUSE RecName: Full=DNA mismatch repair protein Msh6; AltName: Full=G/T
mismatch-binding protein; Short=GTBP; Short=GTMBP;
AltName: Full=MutS-alpha 160 kDa subunit; AltName:
Full=p160
gi|2665637|gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus]
gi|30109297|gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus]
gi|30185718|gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
Length = 1358
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 301/866 (34%), Positives = 447/866 (51%), Gaps = 85/866 (9%)
Query: 152 EKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKE 209
E E Q SV +R R K+ V+ D E ++ + E D + + S DD + VG
Sbjct: 226 ESEEEAQPSVQGPRRSSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDS 285
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDK 267
D E++ + K R + +KS K G+A A +PI+ K
Sbjct: 286 D---SEDLGTFGKGAPKRKRAMVAQGGLRRKSLKKETGSAKRA---TPILSETK-----S 334
Query: 268 LSNGFDNPVMGDVSERFSAREADK------FH----FLGPD-RRDAKRRRPGDVYYDPRT 316
+ F P + S D +H +L P+ RRD RRRP ++P T
Sbjct: 335 TLSAFSAPQNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTT 394
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 395 LYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGN 454
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG--SK-DKVVKREICA 433
H GFPE F + L +KGY+V VEQTETPE +E R ++ SK D+VV+REIC
Sbjct: 455 WAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICR 514
Query: 434 VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++TKGT T +L +P + YL++L E + + + R +G+C VD + + +GQ
Sbjct: 515 IITKGTQTY-SVLDGDPSENYSRYLLSLKEKEEETSGHT--RVYGVCFVDTSLGKFFIGQ 571
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
DD CS L++ PV+I+ LS ET+ + + L L+P S+FWDA
Sbjct: 572 FSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATK 631
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--------GS 602
T+ +L + N GD T LP +L + S DS
Sbjct: 632 TL------------RTLLEGGYFTGN----GDSSTVLPLVLKGMTSESDSVGLTPGEESE 675
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL A FE + P + F +++ MVLD
Sbjct: 676 LALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPGAVFTKASQR--MVLD 733
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A L NLE+F N +G + GTL +L+ C T FGKRLL+ WL PL + I +R DAV
Sbjct: 734 AVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVE 793
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVLYEDA--AKKQL 765
L V E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++
Sbjct: 794 DLMAVPDKVT-EVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKI 852
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDA 820
+F+SAL G ++M + L + S+ L ++T P P + + L+ + A
Sbjct: 853 IDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTA 912
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A +G I P G D DYD A ++E E SL ++L +QR LG SI Y IG++
Sbjct: 913 FDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRN 972
Query: 881 LYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++R
Sbjct: 973 RYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRR 1032
Query: 940 LIGQFCEHHNKWRQMVAATAGLTLIL 965
L F ++H W+ V A L ++L
Sbjct: 1033 LFCNFDKNHKDWQSAVECIAVLDVLL 1058
>gi|148706690|gb|EDL38637.1| mCG15886 [Mus musculus]
Length = 1379
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 301/866 (34%), Positives = 447/866 (51%), Gaps = 85/866 (9%)
Query: 152 EKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKE 209
E E Q SV +R R K+ V+ D E ++ + E D + + S DD + VG
Sbjct: 247 ESEEEAQPSVQGPRRSSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDS 306
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDK 267
D E++ + K R + +KS K G+A A +PI+ K
Sbjct: 307 D---SEDLGTFGKGAPKRKRAMVAQGGLRRKSLKKETGSAKRA---TPILSETK-----S 355
Query: 268 LSNGFDNPVMGDVSERFSAREADK------FH----FLGPD-RRDAKRRRPGDVYYDPRT 316
+ F P + S D +H +L P+ RRD RRRP ++P T
Sbjct: 356 TLSAFSAPQNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTT 415
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 416 LYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGN 475
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG--SK-DKVVKREICA 433
H GFPE F + L +KGY+V VEQTETPE +E R ++ SK D+VV+REIC
Sbjct: 476 WAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICR 535
Query: 434 VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++TKGT T +L +P + YL++L E + + + R +G+C VD + + +GQ
Sbjct: 536 IITKGTQTY-SVLDGDPSENYSRYLLSLKEKEEETSGHT--RVYGVCFVDTSLGKFFIGQ 592
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
DD CS L++ PV+I+ LS ET+ + + L L+P S+FWDA
Sbjct: 593 FSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATK 652
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--------GS 602
T+ +L + N GD T LP +L + S DS
Sbjct: 653 TL------------RTLLEGGYFTGN----GDSSTVLPLVLKGMTSESDSVGLTPGEESE 696
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL A FE + P + F +++ MVLD
Sbjct: 697 LALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPGAVFTKASQR--MVLD 754
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A L NLE+F N +G + GTL +L+ C T FGKRLL+ WL PL + I +R DAV
Sbjct: 755 AVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVE 814
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVLYEDA--AKKQL 765
L V E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++
Sbjct: 815 DLMAVPDKVT-EVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKI 873
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDA 820
+F+SAL G ++M + L + S+ L ++T P P + + L+ + A
Sbjct: 874 IDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTA 933
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A +G I P G D DYD A ++E E SL ++L +QR LG SI Y IG++
Sbjct: 934 FDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRN 993
Query: 881 LYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++R
Sbjct: 994 RYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRR 1053
Query: 940 LIGQFCEHHNKWRQMVAATAGLTLIL 965
L F ++H W+ V A L ++L
Sbjct: 1054 LFCNFDKNHKDWQSAVECIAVLDVLL 1079
>gi|26353224|dbj|BAC40242.1| unnamed protein product [Mus musculus]
Length = 1358
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 301/866 (34%), Positives = 447/866 (51%), Gaps = 85/866 (9%)
Query: 152 EKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKE 209
E E Q SV +R R K+ V+ D E ++ + E D + + S DD + VG
Sbjct: 226 ESEEEAQPSVQGPRRSSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDS 285
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDK 267
D E++ + K R + +KS K G+A A +PI+ K
Sbjct: 286 D---SEDLGTFGKGAPKRKRAMVAQGGLRRKSLKKETGSAKRA---TPILSETK-----S 334
Query: 268 LSNGFDNPVMGDVSERFSAREADK------FH----FLGPD-RRDAKRRRPGDVYYDPRT 316
+ F P + S D +H +L P+ RRD RRRP ++P T
Sbjct: 335 TLSAFSAPQNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTT 394
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 395 LYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGN 454
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG--SK-DKVVKREICA 433
H GFPE F + L +KGY+V VEQTETPE +E R ++ SK D+VV+REIC
Sbjct: 455 WAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICR 514
Query: 434 VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++TKGT T +L +P + YL++L E + + + R +G+C VD + + +GQ
Sbjct: 515 IITKGTQTY-SVLDGDPSENYSRYLLSLKEKEEETSGHT--RVYGVCFVDTSLGKFFIGQ 571
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
DD CS L++ PV+I+ LS ET+ + + L L+P S+FWDA
Sbjct: 572 FSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATK 631
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--------GS 602
T+ +L + N GD T LP +L + S DS
Sbjct: 632 TL------------RTLLEGGYFTGN----GDSSTVLPLVLKGMTSESDSVGLTPGEESE 675
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL A FE + P + F +++ MVLD
Sbjct: 676 LALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPGAVFTKASQR--MVLD 733
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A L NLE+F N +G + GTL +L+ C T FGKRLL+ WL PL + I +R DAV
Sbjct: 734 AVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVE 793
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVLYEDA--AKKQL 765
L V E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++
Sbjct: 794 DLMAVPDKVT-EVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKI 852
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDA 820
+F+SAL G ++M + L + S+ L ++T P P + + L+ + A
Sbjct: 853 IDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTA 912
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A +G I P G D DYD A ++E E SL ++L +QR LG SI Y IG++
Sbjct: 913 FDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRN 972
Query: 881 LYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++R
Sbjct: 973 RYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRR 1032
Query: 940 LIGQFCEHHNKWRQMVAATAGLTLIL 965
L F ++H W+ V A L ++L
Sbjct: 1033 LFCNFDKNHKDWQSAVECIAVLDVLL 1058
>gi|392348628|ref|XP_002729643.2| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
Length = 1361
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 269/727 (37%), Positives = 401/727 (55%), Gaps = 54/727 (7%)
Query: 290 DKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+ +L P+ RRD RRRP Y+ TLY+P DFL + + G ++WW+FKS++ D VIF+
Sbjct: 370 ETLEWLKPEKRRDENRRRPDHPDYNSSTLYVPEDFLNSCTPGMRRWWQFKSQNFDLVIFY 429
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTE
Sbjct: 430 KVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTE 489
Query: 409 TPEQLELRRKEKG--SK-DKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESN 462
TPE +E R ++ SK D+VV+REIC ++TKGT T +L +P + YL++L E
Sbjct: 490 TPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTY-SVLDGDPSENYSRYLLSLKEKE 548
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ + R +G+C VD + + LGQ DD CS L L++ PV+I+ LS E
Sbjct: 549 EDSSGHM--RAYGVCFVDTSLGKFFLGQFSDDRHCSRLRTLVAHYPPVQILFEKGNLSTE 606
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNVANSQAEG 581
T+ + + + L L+P S+FWDA T+ ++ Y S + + +E
Sbjct: 607 TKTVLKGYWSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNEGSGAELPPVLKAMTSES 666
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE---------- 631
D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 667 DSVGLTPGEESEL---------SLSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDMV 717
Query: 632 --LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
+ P + F +++ MVLDA L NLE+F N +G + GTL +L+ C T FGKRLL+
Sbjct: 718 GTVKPGAVFTKASQR--MVLDAVTLSNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLK 775
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANG 748
WL PL + I +R DA+ L V A E L +LPD+ERLL+++ S
Sbjct: 776 QWLCAPLCSPSAISDRLDAIEDLMAVPDKVA-EVADLLKKLPDLERLLSKIHNVGSPLKS 834
Query: 749 RNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-- 802
+N + ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L ++T
Sbjct: 835 QNHPDTRAIMYEETTYSKKKIIDFLSALEGFKVMCKITRLMEDVADGFKSKTLKQVVTLQ 894
Query: 803 ---PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
P P + + L + AFD +A +G I P G D DYD A ++E E SL ++
Sbjct: 895 TKSPKGRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEY 954
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKL 918
L +QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K
Sbjct: 955 LDKQRSRIGCRNIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKVIEKK 1014
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILL--------DGSL 970
L L AE ++++LK ++RL F ++H W+ V TA L ++L DG +
Sbjct: 1015 LSNLINAEERRDASLKDCMRRLFYNFDKNHKDWQSAVECTAVLDVLLCLASYSQGGDGPM 1074
Query: 971 LHAFLIL 977
L+L
Sbjct: 1075 CRPVLLL 1081
>gi|449496462|ref|XP_002196049.2| PREDICTED: DNA mismatch repair protein Msh6 [Taeniopygia guttata]
Length = 1359
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 262/722 (36%), Positives = 396/722 (54%), Gaps = 53/722 (7%)
Query: 284 FSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
FS E +K +L RRD RRR GD YDP TLY+P D+L + G ++WW+ KS++
Sbjct: 363 FSVWEHEKLDWLQEGKRRDVHRRRQGDPDYDPCTLYVPEDYLNKCTPGVRRWWQLKSQNF 422
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVL 402
D VI +K+GKFYEL+ MDA G EL L +MKG H GFPE F + L +KGY+V
Sbjct: 423 DAVICYKVGKFYELYHMDAVTGVNELGLIFMKGTWAHSGFPETAFGRFSDVLVQKGYKVA 482
Query: 403 VVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPD---ASYLM 456
VEQTETPE +E R K KG DKVV+REIC ++TKGT T ++ +P + +L+
Sbjct: 483 RVEQTETPEMMEARCKSKGQSTKFDKVVRREICRIITKGTQTYS-VMDCDPSENHSKFLL 541
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
++ E S + R +G+C VD + + +GQ DD CS L++ PV+++
Sbjct: 542 SVKEKEDSAGT----RVYGVCFVDTSMGKFHVGQFPDDRHCSRFRTLVAHYTPVQVLFEK 597
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSN 573
LS +T++ + + + L S+FW+A T +LE + +E+ S
Sbjct: 598 GNLSVDTQKILKGSLVSCIQEGLTSGSQFWNASKTLKVLLEEGYFKEKQNSENGCSLPSV 657
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-- 631
+ + +E D L PG SEL LSALGG +FYLK+ +D+ LL A FE
Sbjct: 658 IKSLTSESDSLGLTPGENSEL---------ALSALGGCVFYLKRCLIDQELLSQANFEEY 708
Query: 632 ----------LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ S F ++ MVLD L NLEV +N +G + GTL +++ C T
Sbjct: 709 VPVDIATAKDMSSSSLFARTGQR--MVLDGVTLMNLEVLQNGTNGSTEGTLLERIDSCCT 766
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
FGKRLL+ WL PL N I +R DAV L V + E + L +LPD+ERLL+++
Sbjct: 767 PFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKMS-EVSEYLKKLPDLERLLSKIH 825
Query: 742 ASS---EANGRNSNKVVLYED--AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ ++ ++ + YE+ +KK++ +F+S L G ++M++ + + +SR
Sbjct: 826 SIGSPLKSQNHPDSRAIFYEELKYSKKKIADFLSTLEGFKIMNEIVEFMEEFASDFKSRV 885
Query: 797 LHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
L ++T P P + + L + AFD +A +G I P G D DYD A + ++
Sbjct: 886 LKQLVTCKARNPDGRFPDLSAELTRWDTAFDHNQARKTGVITPKLGFDPDYDRALEDIRA 945
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRY 910
+E L ++L +QRKLLG S+ Y GK+ Y +E+PES + ++P +YELRSS+KG+ RY
Sbjct: 946 LEEDLRRYLDKQRKLLGSKSVQYWGTGKNRYQMEIPESVISRNLPEEYELRSSRKGYKRY 1005
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSL 970
WT I+K+L + AE +++ALK ++RL F ++ W+ V A L +++ SL
Sbjct: 1006 WTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFAKNSKDWQTAVECIAVLDVLM---SL 1062
Query: 971 LH 972
H
Sbjct: 1063 AH 1064
>gi|301753267|ref|XP_002912469.1| PREDICTED: DNA mismatch repair protein Msh6-like [Ailuropoda
melanoleuca]
gi|281352643|gb|EFB28227.1| hypothetical protein PANDA_000220 [Ailuropoda melanoleuca]
Length = 1362
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 296/857 (34%), Positives = 454/857 (52%), Gaps = 74/857 (8%)
Query: 157 VQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKEDVSED 214
VQ V +R R K+ V+ D E ++ + E D + + S D+ + VG D
Sbjct: 232 VQPKVQGSRRSSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDELSSGVGDSDSEGL 291
Query: 215 EEVDLVDEQENKVLRGR---KRKSS------GVKKSKSDGNAVNADFKSPI---IKPVKI 262
E V + K++ G KRKSS K+S ++++ KS + P
Sbjct: 292 ESPVKVASKRKKMVTGNGSLKRKSSRKEMPLATKRS----TGISSETKSALNAFSAPQNS 347
Query: 263 FGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPP 321
+S G D+ S R + + +L + RRD RRRP +D TLY+P
Sbjct: 348 ESQAHISGGCDD------SSRPTVWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPE 401
Query: 322 DFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCG 381
DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G +L L +MKG H G
Sbjct: 402 DFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNKLGLVFMKGNWAHSG 461
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKG 438
FPE F + L +KGY+V VEQTETPE +E R ++ D+VV+REIC V+TKG
Sbjct: 462 FPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKG 521
Query: 439 TLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
T T +L +P + YL++L E + + + R +G+C VD + + ++GQ DD
Sbjct: 522 TQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--RVYGVCFVDTSLGKFLIGQFSDDR 578
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
CS L++ PV+++ LS ET+ + + L L+P S+FWDA T+ +
Sbjct: 579 HCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTL 638
Query: 556 KNIYNRITAESLNKADSNVANSQ------AEGDGLTCLPGILSELISTGDSGSQVLSALG 609
+ E LN+ DS V Q +E D L PG SEL LSALG
Sbjct: 639 --LEEGYFKEKLNE-DSGVMLPQVLKGMTSESDSLGLTPGEKSEL---------ALSALG 686
Query: 610 GTLFYLKKSFLDETLLRFAKFE--------LLPCSGFGDMAKKP--YMVLDAPALENLEV 659
G +FYLKK +D+ LL A FE ++ +G G K MVLDA L NLE+
Sbjct: 687 GCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAAGPGAFFAKANQRMVLDAVTLSNLEI 746
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
F N +G + GTL +++ C T FGKRLL+ WL PL + I +R DA+ L V
Sbjct: 747 FMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKI 806
Query: 720 ALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHG 774
+ + L +LPD+ERLL+++ S +N ++ ++YE+ +KK++ +F+SAL G
Sbjct: 807 S-DVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEG 865
Query: 775 CELMDQACSSLGAILENTESRQLHHIL-----TPGKGLPAIVSILKHFKDAFDWVEANNS 829
+++ + + +++N +S+ L ++ TP P + L + AFD +A +
Sbjct: 866 FKVICKIIEIMEEVVDNFKSKILKQVVTLQTKTPEGRFPDLTLELNRWDTAFDHEKARKT 925
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
G I P G D DYD A +KE E SL ++L++QR +G +I Y IG++ Y LE+PE+
Sbjct: 926 GLITPKAGFDSDYDQALADIKENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPEN 985
Query: 890 -LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++RL F +++
Sbjct: 986 FITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRRLFYNFDKNY 1045
Query: 949 NKWRQMVAATAGLTLIL 965
W+ V A L ++L
Sbjct: 1046 KDWQSAVECIAVLDVLL 1062
>gi|1817725|gb|AAC53034.1| G/T-mismatch binding protein [Mus musculus]
Length = 1358
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 263/705 (37%), Positives = 389/705 (55%), Gaps = 61/705 (8%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP ++P TLY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 377 RRDEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 437 MDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCR 496
Query: 419 EKG--SK-DKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ SK D+VV+REIC ++TKGT T +L +P + YL++L E + + + R
Sbjct: 497 KMAHVSKFDRVVRREICRIITKGTQTY-SVLDGDPSENYSRYLLSLKEKEEETSGHT--R 553
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+I+ LS ET+ +
Sbjct: 554 VYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLS 613
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
+ L L+P S+FWDA T+ +L + N GD T LP +L
Sbjct: 614 SCLQEGLIPGSQFWDATKTL------------RTLLEGGYFTGN----GDSSTVLPLVLK 657
Query: 593 ELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFE------------L 632
+ S DS LSALGG +FYLKK +D+ LL A FE +
Sbjct: 658 GMTSESDSVGLTPGEESELALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTV 717
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
P + F +++ MVLDA L NLE+F N +G + G L +L+ C T FGKRLL+ WL
Sbjct: 718 KPGAVFTKASQR--MVLDAVTLNNLEIFLNGTNGSTEGNLLERLDTCHTPFGKRLLKQWL 775
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLF-ASSEANGRN 750
PL + I +R DAV L V P+ + E L +LPD+ERLL+++ S +N
Sbjct: 776 CAPLCSPSAISDRLDAVEDLMAV--PYKVTEVADLLKKLPDLERLLSKIHNVGSPLKSQN 833
Query: 751 S--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT---- 802
++ ++YE+ +KK++ +F+SAL G ++M + L + S+ L ++T
Sbjct: 834 HPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSK 893
Query: 803 -PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
P P + + L+ + AFD +A +G I P G D DYD A ++E E SL ++L
Sbjct: 894 SPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLD 953
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+QR LG SI Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 954 KQRSRLGCKSIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLA 1013
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++++LK ++RL F ++H W+ V A L ++L
Sbjct: 1014 NLINAEERRDTSLKDCMRRLFCNFDKNHKDWQSAVECIAVLDVLL 1058
>gi|293347880|ref|XP_002726765.1| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
gi|149050458|gb|EDM02631.1| rCG61559 [Rattus norvegicus]
Length = 1361
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 269/727 (37%), Positives = 400/727 (55%), Gaps = 54/727 (7%)
Query: 290 DKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+ +L P+ RRD RRRP Y+ TLY+P DFL + + G ++WW+FKS++ D VIF+
Sbjct: 370 ETLEWLKPEKRRDENRRRPDHPDYNSSTLYVPEDFLNSCTPGMRRWWQFKSQNFDLVIFY 429
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTE
Sbjct: 430 KVGKFYELYHMDAVIGVSELGLIFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTE 489
Query: 409 TPEQLELRRKEKG--SK-DKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESN 462
TPE +E R ++ SK D+VV+REIC ++TKGT T +L +P + YL++L E
Sbjct: 490 TPEMMEARCRKMAHVSKFDRVVRREICRIITKGTQTY-SVLDGDPSENYSRYLLSLKEKE 548
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ + R +G+C VD + + LGQ DD CS L L++ PV+I+ LS E
Sbjct: 549 EDSSGHM--RAYGVCFVDTSLGKFFLGQFSDDRHCSRLRTLVAHYPPVQILFEKGNLSTE 606
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNVANSQAEG 581
T+ + + L L+P S+FWDA T+ ++ Y S + + +E
Sbjct: 607 TKTVLKGSLSSCLQEGLIPGSQFWDATKTLRTLLEGGYFTGNEGSGAELPPVLKAMTSES 666
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE---------- 631
D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 667 DSVGLTPGEESEL---------SLSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDMV 717
Query: 632 --LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
+ P + F +++ MVLDA L NLE+F N +G + GTL +L+ C T FGKRLL+
Sbjct: 718 GTVKPGAVFTKASQR--MVLDAVTLSNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLK 775
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANG 748
WL PL + I +R DA+ L V A E L +LPD+ERLL+++ S
Sbjct: 776 QWLCAPLCSPSAISDRLDAIEDLMAVPDKVA-EVADLLKKLPDLERLLSKIHNVGSPLKS 834
Query: 749 RNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-- 802
+N + ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L ++T
Sbjct: 835 QNHPDTRAIMYEETTYSKKKIIDFLSALEGFKVMCKITRLMEDVADGFKSKTLKQVVTLQ 894
Query: 803 ---PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
P P + + L + AFD +A +G I P G D DYD A ++E E SL ++
Sbjct: 895 TKSPKGRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEY 954
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKL 918
L +QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K
Sbjct: 955 LDKQRSRIGCRNIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKVIEKK 1014
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILL--------DGSL 970
L L AE ++++LK ++RL F ++H W+ V TA L ++L DG +
Sbjct: 1015 LSNLINAEERRDASLKDCMRRLFYNFDKNHKDWQSAVECTAVLDVLLCLASYSQGGDGPM 1074
Query: 971 LHAFLIL 977
L+L
Sbjct: 1075 CRPVLLL 1081
>gi|301611818|ref|XP_002935421.1| PREDICTED: DNA mismatch repair protein Msh6 [Xenopus (Silurana)
tropicalis]
Length = 1338
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 264/736 (35%), Positives = 398/736 (54%), Gaps = 55/736 (7%)
Query: 285 SAREADKFHFLGPDRR-DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
S + +KF +L RR D KR++ D YDP TLY+P DFL + G ++WW+ KS++ D
Sbjct: 342 SVWDHEKFDWLQDGRRKDLKRKKQNDADYDPSTLYVPDDFLNKCTPGMRKWWQLKSQNFD 401
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
VIF+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V
Sbjct: 402 TVIFYKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIAFGRFSDVLVQKGYKVAR 461
Query: 404 VEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMA 457
VEQTETPE +E+R K D+VV+REIC ++TKGT T +L NP S YL+
Sbjct: 462 VEQTETPEMMEVRCKSMSHPSKFDRVVRREICRIITKGTQTYS-VLDGNPSESHSKYLLC 520
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
E + Q R +G+ VD + + +GQ DD CS L++ P++I+
Sbjct: 521 FKEKMDDSSGQR--RIYGVSFVDTSVGKFHVGQFEDDRHCSRFRTLVAHFPPIQILFEKG 578
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVA 575
S +T++ + + L P S+FWDA T+ L + + + + +
Sbjct: 579 NPSSDTKKVLKSCLSTSIQESLQPTSQFWDAFKTLKTLAEEAYFEKDFQPGSGNLPTVLK 638
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLP 634
N +E D L PG SEL LSALG ++YLKK +D+ LL A F E +P
Sbjct: 639 NLTSENDSLALTPGEKSEL---------ALSALGACIYYLKKCLIDQELLSMANFEEYIP 689
Query: 635 C-----------SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
S F +++ MVLD L NLE+ +N +G + GTL +L+ C T F
Sbjct: 690 VDTGIEKAQASSSFFAKTSQR--MVLDGVTLTNLEILQNGTNGSTEGTLLEKLDTCSTPF 747
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
GKRLL+ WL PL N I +R +AV L + + E L +LPD+ERLL+++ +
Sbjct: 748 GKRLLKQWLCAPLCNPFSINDRLNAVEDLMDLPDKVS-EVSDLLKKLPDLERLLSKIHSI 806
Query: 744 S---EANGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
++ ++ V+YE+ A KK++ +F+SAL G ++M + S L N +S L
Sbjct: 807 GSPLKSQNHPDSRAVMYEEIAYSKKKIADFLSALEGFKVMREVISILEDAAANFKSSILK 866
Query: 799 HIL-----TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
I+ TP P + + LK + +FD +A +G I P G D DYD A K +K E
Sbjct: 867 QIVSIKGKTPQGHFPDLSAELKRWDTSFDHEKARKTGVITPKVGFDPDYDEALKDIKTTE 926
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWT 912
L ++L +QRK L ++ Y K+ Y +E+PES+ ++P +YEL+S+KKG+ RYWT
Sbjct: 927 QDLNEYLDKQRKRLSCKTVVYWGTAKNRYQMEIPESVTERNLPEEYELKSTKKGYKRYWT 986
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILL------ 966
I+K+ G+L+ AE +++ALK ++RL F +++ +W+ V A L +++
Sbjct: 987 KAIEKMFGDLANAEERRDAALKDCMRRLFYNFDKNYKEWQTAVECFAVLDVLISLSQYSQ 1046
Query: 967 --DGSLLHAFLILQSN 980
DG + ++LQ N
Sbjct: 1047 GGDGPVCRPVIVLQDN 1062
>gi|440906162|gb|ELR56463.1| DNA mismatch repair protein Msh6 [Bos grunniens mutus]
Length = 1361
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/697 (36%), Positives = 390/697 (55%), Gaps = 43/697 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYE++
Sbjct: 378 RRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYEMYH 437
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 438 MDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 497
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L +P + YL++L E + + + R
Sbjct: 498 KMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEESSGHT--R 554
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + R +GQ DD CS L++ PV+++ LS +T+ +
Sbjct: 555 VYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSMDTKMILKSSLS 614
Query: 533 NPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE +++ + + +E D + PG
Sbjct: 615 SSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQVLKGMTSESDSIGLTPG 674
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 675 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAV 725
Query: 646 ------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL N
Sbjct: 726 FAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP 785
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVL 756
I +R DA+ L V + E L +LPD+ERLL+++ S +N ++ ++
Sbjct: 786 HAINDRLDAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIM 844
Query: 757 YEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPA 809
YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L +LT P P
Sbjct: 845 YEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVLTLQTKSPEGRFPD 904
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S L + AFD +A +G I P G D DYD A ++E E SL ++L++QR +G
Sbjct: 905 LTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGC 964
Query: 870 TSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K LG L AE
Sbjct: 965 RTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLGNLINAEER 1024
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++++LK ++RL F +++ W+ V A L ++L
Sbjct: 1025 RDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLL 1061
>gi|300794942|ref|NP_001179666.1| DNA mismatch repair protein Msh6 [Bos taurus]
gi|296482664|tpg|DAA24779.1| TPA: mutS homolog 6 [Bos taurus]
Length = 1360
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/697 (36%), Positives = 390/697 (55%), Gaps = 43/697 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYE++
Sbjct: 377 RRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYEMYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 437 MDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 496
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L +P + YL++L E + + + R
Sbjct: 497 KMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEESSGHT--R 553
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + R +GQ DD CS L++ PV+++ LS +T+ +
Sbjct: 554 VYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSMDTKMILKSSLS 613
Query: 533 NPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE +++ + + +E D + PG
Sbjct: 614 SSLQEGLIPGSQFWDAAKTLRTLLEEGYFIDKLNEDGGVMLPQVLKGMTSESDSIGLTPG 673
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 674 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAV 724
Query: 646 ------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL N
Sbjct: 725 FAKANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP 784
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVL 756
I +R DA+ L V + E L +LPD+ERLL+++ S +N ++ ++
Sbjct: 785 HAINDRLDAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIM 843
Query: 757 YEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPA 809
YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L +LT P P
Sbjct: 844 YEETTYSKKKIIDFLSALEGFKVICKIIGIMEEVIDDFKSKILKQVLTLQTKSPEGRFPD 903
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S L + AFD +A +G I P G D DYD A ++E E SL ++L++QR +G
Sbjct: 904 LTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGC 963
Query: 870 TSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K LG L AE
Sbjct: 964 RTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLGNLINAEER 1023
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++++LK ++RL F +++ W+ V A L ++L
Sbjct: 1024 RDASLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLL 1060
>gi|417413734|gb|JAA53181.1| Putative mismatch repair atpase msh2 muts family, partial [Desmodus
rotundus]
Length = 1280
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 261/702 (37%), Positives = 390/702 (55%), Gaps = 53/702 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 297 RRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 356
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 357 MDALTGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 416
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ DKVV+REIC V+TKGT T +L +P + YL++L E + + R
Sbjct: 417 KMAHICKHDKVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEDDSSGHT--R 473
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 474 VYGVCFVDASLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLS 533
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTC 586
+ L L+P S+FWDA T+ + + R E LN+ DS V Q +E D +
Sbjct: 534 SSLQEALIPGSQFWDAAKTLRTL--LEERYFTEKLNE-DSGVMLPQVLKGMTSESDSIGL 590
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLP 634
PG SEL LSALGG +FYLKK +D+ LL A FE P
Sbjct: 591 TPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDLVNATRP 641
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ F +++ MVLD+ L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 642 GAVFSKASQR--MVLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCA 699
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS-- 751
PL N I +R DA+ L V E L +LPD+ERLL+++ S +N
Sbjct: 700 PLCNPFAINDRLDAIEDLMVVPDKIP-ELADLLKKLPDLERLLSKIHNVGSPLKSQNHPD 758
Query: 752 NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PG 804
++ ++YE+ +KK++ +F+SAL G +++ + + + ++++ +S+ L ++T P
Sbjct: 759 SRAIMYEETTYSKKKIIDFLSALEGFKVICKIIAIMEEVIDDFKSKILKQVITLQTKNPE 818
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L + AFD +A +G I P G D DYD A +KE E SL ++L++QR
Sbjct: 819 GRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIKENEQSLLEYLEKQR 878
Query: 865 KLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+G +I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L
Sbjct: 879 SRIGCRTIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIEKKLANLI 938
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 939 NAEERRDVSLKDCMRRLFYNFDKNYKNWQAAVECIAVLDVLL 980
>gi|348574694|ref|XP_003473125.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
[Cavia porcellus]
Length = 1354
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/695 (36%), Positives = 383/695 (55%), Gaps = 41/695 (5%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +DP TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 376 RRDEHRRRPDHPDFDPSTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 435
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA VG EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 436 MDALVGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 495
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFG 475
+ DKVV+REIC ++TKGT T +L +P +Y L + S R +G
Sbjct: 496 KMAHISKYDKVVRREICRIITKGTQTY-SVLEGDPSENYSKYLLSLKEKEDSSGHVRLYG 554
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
+C VD + + +GQ DD CS L++ PV+++ LS ET+ + + L
Sbjct: 555 VCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVETKTILKGTLSSSL 614
Query: 536 VNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
L+P S+FWDA T+LE ++ ++ S + +E D + PG S
Sbjct: 615 QEGLIPGSQFWDAAKTLRTLLEEGYFTEKLNEDTGVMLPSVLKGMTSESDSIGLTPGENS 674
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-----------LLPCSGFGDM 641
EL LSALGG +FYLKK +D+ LL A FE + P + F
Sbjct: 675 EL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSVRPGAIFTKA 725
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
++ MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL +
Sbjct: 726 NQR--MVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCYTPFGKRLLKQWLCAPLCSPFA 783
Query: 702 IRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVLYE 758
I +R DAV L V + E L +LPD+ERLL+++ S +N ++ ++YE
Sbjct: 784 INDRLDAVEDLMDVPDKIS-EVTDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYE 842
Query: 759 DA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIV 811
+ +KK++ +F+SAL G ++M + + +++ +S+ L ++T P P +
Sbjct: 843 ETTYSKKKIIDFLSALEGFKVMCKIIEIMEEVVDGFKSKILKQVVTLQIKNPEGRFPDLT 902
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
+ L + AFD +A +G I P G D DYD A ++E E SL ++L +QR +G +
Sbjct: 903 TELNRWDTAFDHEKARRTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRIGCRT 962
Query: 872 ITYVTIGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++
Sbjct: 963 IVYWGIGRNRYQLEIPENFTIHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRD 1022
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+LK ++RL F +++ W+ V A L ++L
Sbjct: 1023 VSLKDCMRRLFYNFDKNYKDWQCAVECIAVLDVLL 1057
>gi|326914905|ref|XP_003203763.1| PREDICTED: DNA mismatch repair protein Msh6-like [Meleagris
gallopavo]
Length = 1289
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 281/823 (34%), Positives = 430/823 (52%), Gaps = 68/823 (8%)
Query: 209 EDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPI-IKPVKIFGSDK 267
E+ + D E D +E+ + KRK V K + N ++P PV + K
Sbjct: 210 ENEATDAETDAESVEESPIKVPSKRKRGNVSKPSKRSSLENEHSEAPKRAAPVSLEAKSK 269
Query: 268 LS-----NGFD---NPVMGDVSERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLY 318
L+ + F+ N G +A E +K +L ++DA RRR D YDP TLY
Sbjct: 270 LTLFAAPDNFESQANACSGGTGG-LAAWEHEKLEWLQEGKKKDAHRRRQNDPDYDPCTLY 328
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQP 378
+P D+L + G ++WW+ KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 329 VPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGLIFMKGSWA 388
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVV 435
H GFPE F L +KGY++ VEQTETPE +E R K DKVV+REIC ++
Sbjct: 389 HSGFPETAFGRFSAILVQKGYKIARVEQTETPEMMEARCKATAHPTRFDKVVRREICRIL 448
Query: 436 TKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
TKGT T ++ +P + YL+ + E S S R +G+C VD + + +GQ
Sbjct: 449 TKGTQTYS-IIDCDPSENHNKYLLCVKEKEDS----SGQRVYGVCFVDTSVGKFYVGQFS 503
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT- 551
DD CS L++ PV+++ L+ +T++ + + + L+ S+FW A T
Sbjct: 504 DDRHCSRFRTLVAHYTPVQVLFEKGNLTVDTQKILKGSLISCIQEGLISGSQFWSASKTL 563
Query: 552 --VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
+LE + E+ S + + +E D L PG SEL LSALG
Sbjct: 564 KVLLEEEYFKENQNPENGCVLPSVIKSLTSESDSLGLTPGENSEL---------ALSALG 614
Query: 610 GTLFYLKKSFLDETLLRFAKFE-LLPCSGFGDMAKKP-----------YMVLDAPALENL 657
G +FYLKK +D+ LL A FE +P D AK MVLD L NL
Sbjct: 615 GIVFYLKKCLIDQELLSLANFEKYVPVD--ADNAKTASASNFFARTDRRMVLDGVTLMNL 672
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
EV +N +G + GTL +++ C T FGKRLL+ WL PL N I +R DAV L V
Sbjct: 673 EVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPTSINDRLDAVEDLLAVPA 732
Query: 718 PFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKVVLYEDA--AKKQLQEFISAL 772
E + L +LPD+ERLL+++ + ++ ++ + YE+ +KK++ +F+SAL
Sbjct: 733 KLT-EISEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSAL 791
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEAN 827
G ++M++ ++ + + +S+ L ++T P P + + LK + AFD +A
Sbjct: 792 EGFKVMNEIVDAMEEVASDFKSQVLKQLVTRKAKHPDGRFPDLSAELKRWDTAFDHNQAR 851
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
+G I P G D DYD A + +K +E +L +QRKLLG S+ Y GK+ Y +E+P
Sbjct: 852 KTGVITPKAGFDSDYDKALQDIKTVEEDFRAYLDKQRKLLGVKSVLYWGTGKNRYQMEIP 911
Query: 888 ES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
E+ + ++P +YEL+S++KG+ RYWT I+K+L EL AE +++ALK ++RL F +
Sbjct: 912 ETAISRNLPEEYELKSTRKGYKRYWTKEIEKMLAELINAEERRDAALKDCMRRLFYNFDK 971
Query: 947 HHNKWRQMVAATAGLTLILL--------DGSLLHAFLILQSNS 981
+ W+ V A L +++ DG L ++L +S
Sbjct: 972 NSQDWQTAVQCIAVLDVLMSLANYSQDGDGPLCRPVILLPVDS 1014
>gi|344245100|gb|EGW01204.1| DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1260
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/710 (36%), Positives = 394/710 (55%), Gaps = 59/710 (8%)
Query: 294 FLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
+L P+ RRD RRRP ++ TLY+P DFL + + G ++WWE KS++ D VIF+K+GK
Sbjct: 272 WLKPEKRRDEHRRRPDHPDFNSSTLYVPEDFLNSCTPGMRKWWEIKSQNFDLVIFYKVGK 331
Query: 353 FYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
FYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 332 FYELYHMDAVIGVNELGLVFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEM 391
Query: 413 LELRRKEKG--SK-DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPA 466
+E R ++ SK D+VV+RE+C ++TKGT T G +L +P S YL++L E + +
Sbjct: 392 MEARCRKMAHVSKFDRVVRREVCRIITKGTQTYG-VLEGDPSESNSRYLLSLKEKEEDSS 450
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ R +G+C VD + + +GQ DD CS L++ PV+I+ LS ET+
Sbjct: 451 GHT--RVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTV 508
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ + L L+P S+FWDA T+ + + + ++EG G+
Sbjct: 509 LKGSLSSCLQEGLIPGSQFWDATKTLRTL--------------LEEGYFSGKSEGSGVV- 553
Query: 587 LPGILSELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFE------- 631
LPG+L + S DS LSALGG +FYLKK +D+ LL A FE
Sbjct: 554 LPGVLKSMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDS 613
Query: 632 -----LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ P + F +++ MVLDA L NLE+F N +G + GTL +L+ C T FGKR
Sbjct: 614 DKVTTVRPGAIFTTASQR--MVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKR 671
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---AS 743
LL+ WL PL + I +R DAV L + E L +LPD+ERLL+++ +
Sbjct: 672 LLKQWLCAPLCSPSAISDRLDAVGDLMALPDKVN-EVTDLLKKLPDLERLLSKIHNIGSP 730
Query: 744 SEANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
++ ++ ++YE+ +KK++ +F+S L G +++ + + + ++ +S+ L ++
Sbjct: 731 LKSQNHPDSRAIMYEETTYSKKKIIDFLSTLEGFKVVCKIIELMEGVADDFKSKTLRRVV 790
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
T P P + + L + AFD +A +G I P G D DYD A +KE E SL
Sbjct: 791 TLQTKSPEGRFPDLSAELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALADIKENEQSL 850
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L +QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 851 LEYLDKQRSRIGCRTIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTI 910
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K L L AE ++ +LK ++RL F +++ W+ + A L ++L
Sbjct: 911 EKKLSNLINAEERRDMSLKDCMRRLFYNFAKNYKDWQSAIECIAVLDVLL 960
>gi|354474750|ref|XP_003499593.1| PREDICTED: DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1297
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/710 (36%), Positives = 394/710 (55%), Gaps = 59/710 (8%)
Query: 294 FLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
+L P+ RRD RRRP ++ TLY+P DFL + + G ++WWE KS++ D VIF+K+GK
Sbjct: 309 WLKPEKRRDEHRRRPDHPDFNSSTLYVPEDFLNSCTPGMRKWWEIKSQNFDLVIFYKVGK 368
Query: 353 FYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
FYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 369 FYELYHMDAVIGVNELGLVFMKGNWAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEM 428
Query: 413 LELRRKEKG--SK-DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPA 466
+E R ++ SK D+VV+RE+C ++TKGT T G +L +P S YL++L E + +
Sbjct: 429 MEARCRKMAHVSKFDRVVRREVCRIITKGTQTYG-VLEGDPSESNSRYLLSLKEKEEDSS 487
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ R +G+C VD + + +GQ DD CS L++ PV+I+ LS ET+
Sbjct: 488 GHT--RVYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTV 545
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ + L L+P S+FWDA T+ + + + ++EG G+
Sbjct: 546 LKGSLSSCLQEGLIPGSQFWDATKTLRTL--------------LEEGYFSGKSEGSGVV- 590
Query: 587 LPGILSELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFE------- 631
LPG+L + S DS LSALGG +FYLKK +D+ LL A FE
Sbjct: 591 LPGVLKSMTSESDSIGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDS 650
Query: 632 -----LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ P + F +++ MVLDA L NLE+F N +G + GTL +L+ C T FGKR
Sbjct: 651 DKVTTVRPGAIFTTASQR--MVLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKR 708
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---AS 743
LL+ WL PL + I +R DAV L + E L +LPD+ERLL+++ +
Sbjct: 709 LLKQWLCAPLCSPSAISDRLDAVGDLMALPDKVN-EVTDLLKKLPDLERLLSKIHNIGSP 767
Query: 744 SEANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
++ ++ ++YE+ +KK++ +F+S L G +++ + + + ++ +S+ L ++
Sbjct: 768 LKSQNHPDSRAIMYEETTYSKKKIIDFLSTLEGFKVVCKIIELMEGVADDFKSKTLRRVV 827
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
T P P + + L + AFD +A +G I P G D DYD A +KE E SL
Sbjct: 828 TLQTKSPEGRFPDLSAELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALADIKENEQSL 887
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L +QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 888 LEYLDKQRSRIGCRTIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTI 947
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K L L AE ++ +LK ++RL F +++ W+ + A L ++L
Sbjct: 948 EKKLSNLINAEERRDMSLKDCMRRLFYNFAKNYKDWQSAIECIAVLDVLL 997
>gi|363731315|ref|XP_419359.3| PREDICTED: DNA mismatch repair protein Msh6 [Gallus gallus]
Length = 1345
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 286/843 (33%), Positives = 437/843 (51%), Gaps = 69/843 (8%)
Query: 189 EISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAV 248
E D ++S ++ + V E+ + D E D +E+ + KRK V K +
Sbjct: 247 EFKPDVKEASSEEASSGV-DENEATDVETDEESIEESPIKVPSKRKRGNVSKPSKRSSLE 305
Query: 249 NADFKSPI-IKPVKIFGSDKLS-----NGFD---NPVMGDVSERFSAREADKFHFLGP-D 298
N ++P PV + KL+ F+ N G + F+A E +K +L
Sbjct: 306 NEHSEAPKRAAPVSLEAKSKLTLFAAPENFESQANACSGG-TNGFAAWEHEKLEWLQEGK 364
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
++DA RRR YDP TLY+P D+L + G ++WW+ KS++ D VI +K+GKFYEL+
Sbjct: 365 KKDAHRRRQNHPDYDPCTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYH 424
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA G EL L +MKG H GFPE F L +KGY++ VEQTETPE +E R K
Sbjct: 425 MDAVTGVNELGLIFMKGSWAHSGFPETAFGRFSAILVQKGYKIARVEQTETPEMMEARCK 484
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDR 472
DKVV+REIC ++TKGT T ++ +P + YL+ + E S S R
Sbjct: 485 ATAHTTKFDKVVRREICRIITKGTQTYS-IIDCDPTENHNKYLLCVKEKEDS----SGQR 539
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ L+ +T++ +
Sbjct: 540 VYGVCFVDTSVGKFYVGQFSDDRHCSRFRTLVAHYTPVQVLFEKGNLTVDTQKILKGSLI 599
Query: 533 NPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ + L+ S+FW A T +LE + ES S + + +E D L PG
Sbjct: 600 SCIQEGLISGSQFWSASKTLKVLLEEEYFKENQNTESGCVLPSVIKSLTSESDSLGLTPG 659
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A FE +P D AK
Sbjct: 660 ENSEL---------ALSALGGIVFYLKKCLIDQELLSLANFEKYIPVD--ADNAKTVSSS 708
Query: 646 --------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
MVLD L NLEV +N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 709 NFFARTDRRMVLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLC 768
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKV 754
N I +R DAV L V E + L +LPD+ERLL+++ + ++ ++
Sbjct: 769 NPTSINDRLDAVEDLLAVPAKLT-EITEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRA 827
Query: 755 VLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGL 807
+ YE+ +KK++ +F+SAL G ++M++ ++ + + +S+ L ++T P
Sbjct: 828 IFYEEIKYSKKKIADFLSALEGFKVMNEIVDAMEEVASDFKSQVLKQLVTRKAKHPDGRF 887
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + + LK + AFD +A +G I P G D DYD A + +K +E +L +QRKLL
Sbjct: 888 PDLSAELKRWDTAFDHNQARKTGVITPKAGFDPDYDKALQDIKTVEEDFRTYLDKQRKLL 947
Query: 868 GDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
G S+ Y GK+ Y +E+PE+ ++P +YEL+S++KG+ RYWT I+K+L EL AE
Sbjct: 948 GLKSVLYWGTGKNRYQMEIPETATSRNLPEEYELKSTRKGYKRYWTKEIEKMLAELINAE 1007
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILL--------DGSLLHAFLILQ 978
+++ALK ++RL F ++ W+ V A L +++ DG L ++L
Sbjct: 1008 ERRDAALKDCMRRLFYNFDKNSQDWQTAVQCIAVLDVLMSLANYSQDGDGPLCRPVILLP 1067
Query: 979 SNS 981
+S
Sbjct: 1068 VDS 1070
>gi|126304451|ref|XP_001382177.1| PREDICTED: DNA mismatch repair protein Msh6 [Monodelphis domestica]
Length = 1423
Score = 427 bits (1097), Expect = e-116, Method: Compositional matrix adjust.
Identities = 255/696 (36%), Positives = 385/696 (55%), Gaps = 44/696 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+DA RRRP YDP T+++P DFL + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 442 RKDACRRRPDHSDYDPNTVHVPEDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYELYH 501
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 502 MDAVIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 561
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L P S YL+ + E + + + R
Sbjct: 562 KLSHISRFDRVVRREICRIITKGTQTYS-VLDGEPSESSNKYLLCVKEKEEEASGHT--R 618
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C +D + + +GQ DD CS L++ P +I+ LS ET + +
Sbjct: 619 LYGVCFIDTSVGKFYMGQFSDDRHCSRFRTLVAHYTPAQILFEKGNLSVETRKVLKGSLS 678
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD--SNVANSQAEGDGLTCLPGI 590
+ + L P S+FWDA T+ + + E LN A+ + + +E D + P
Sbjct: 679 SSIQEGLTPGSQFWDAAKTLKTL--LEEGYFKEKLNVAELPPVLKSMTSESDTIGLTPND 736
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---- 645
SEL LSALGG +FYLKK +D LL A F E +P A KP
Sbjct: 737 KSEL---------ALSALGGCVFYLKKCLIDYELLSMANFEEYIPIDADMVKAVKPGAVF 787
Query: 646 -----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
MVLDA L NLE+ +N+ +G + GTL +++ C T FGKRLL+ WL PL N
Sbjct: 788 AKRDRRMVLDAVTLSNLEILQNAVNGSTEGTLLERIDSCCTPFGKRLLKHWLCAPLCNPS 847
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKVVLY 757
I +R DA+ L V + E L +LPD+ERLL ++ + ++ ++ ++Y
Sbjct: 848 SINDRLDAMEDLMAVPDKTS-EVVDLLKKLPDLERLLNKIHSVGSPLKSQKHPDSRAIMY 906
Query: 758 EDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAI 810
E+ +KK++ +F+SAL G ++M + + +++N +S+ L I+T G P +
Sbjct: 907 EETTYSKKKIVDFLSALEGFKVMCKIIGIMEEVVDNFKSKILKQIITLQTQNSGGRFPEL 966
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
+ L + AFD +A +G I P G D DYD A +K+ E SL ++L++QRK +G
Sbjct: 967 TTELNRWDTAFDHEKARKTGIITPKAGFDSDYDHALADIKDNEQSLLEYLEKQRKRIGCR 1026
Query: 871 SITYVTIGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
SI Y +GK+ Y LE+PES +P +YEL+S+KKG RYWT +I+K L +L AE +
Sbjct: 1027 SIVYWGVGKNRYQLEIPESFTLHDLPEEYELKSTKKGCKRYWTKDIEKKLADLMNAEERR 1086
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ +LK ++R+ F +++ W+ V A ++L
Sbjct: 1087 DISLKDCMRRIFFNFDKNYTDWQTAVECIAVFDVLL 1122
>gi|426223707|ref|XP_004023308.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
[Ovis aries]
Length = 1352
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/697 (36%), Positives = 389/697 (55%), Gaps = 43/697 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 369 RRDVHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYR 428
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G EL L +MKG H GFPE F + L +KGY+V VEQTETP+ +E R +
Sbjct: 429 RDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPDMMEARCR 488
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV REIC V+TKGT T +L +P + YL++L E + + + R
Sbjct: 489 KMAHTSKYDRVVMREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEESSGHT--R 545
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + R +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 546 VYGVCFVDTSLGRFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKSSLS 605
Query: 533 NPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE +++ + + AE D + PG
Sbjct: 606 SSLQEGLIPGSQFWDAAKTLRTLLEEGYFTDKLNEDGGVMLPQVLKGMTAESDSIGLTPG 665
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 666 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDMVHATRPGAV 716
Query: 646 ------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL N
Sbjct: 717 FTKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNP 776
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVL 756
I +R DA+ L V + E L +LPD+ERLL+++ S +N ++ ++
Sbjct: 777 HAINDRLDAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIM 835
Query: 757 YEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPA 809
YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L +LT P P
Sbjct: 836 YEETTYSKKKIIDFLSALEGFKVICKVIGVMEEVIDDFKSKILKQVLTLQTKNPEGRFPD 895
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S L + AFD +A +G I P G D DYD A ++E E SL ++L++QR +G
Sbjct: 896 LTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGC 955
Query: 870 TSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L +L +AE
Sbjct: 956 RTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLADLIKAEER 1015
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++++LK ++RL F +++ W+ V A L ++L
Sbjct: 1016 RDTSLKDCMRRLFYNFDKNYKDWQAAVECIAVLDVLL 1052
>gi|444518975|gb|ELV12486.1| DNA mismatch repair protein Msh6 [Tupaia chinensis]
Length = 1306
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 286/824 (34%), Positives = 437/824 (53%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K K++ S DE + + E+ KV RKR +G +
Sbjct: 252 ISDSESDIGGSDVEFKPDAKDEGSSDEVSSAMGDSESEGLYSPVKVAPKRKRMITGNGSL 311
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDK-LSNGFDNPVMGDVSERFSAREADKF 292
K+ S +A ++P I + F S + L + GD S R + +
Sbjct: 312 KRKSSRKEMPSATKRTPGISSETKNTLSAFSSPQPLESQVHVSGGGDESSRPTVWYHETL 371
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+G
Sbjct: 372 EWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVG 431
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 432 KFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 491
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC V+TKGT T +L +P + YL++L E +
Sbjct: 492 MMEARCRKMAHISKHDRVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEES 550
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 551 SGHT--RVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSMETKA 608
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE ++ +S + N +E D
Sbjct: 609 VLKSSLSSSLQEGLIPGSQFWDATKTLRTLLEEGYFTEKLNEDSTVMLPQVLKNMTSESD 668
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE ++
Sbjct: 669 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEKYIPLDSDMVS 719
Query: 635 CSGFGDMAKKP--YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K MVLDA L NLE+F N +G + GTL +++ C T+FGKRLL+ WL
Sbjct: 720 TTKSGAIFAKTNQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCQTSFGKRLLKQWL 779
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL + I +R DA+ L V + E L +LPD+ERLL+++ S +N
Sbjct: 780 CAPLCSPYAINDRLDAIEDLMVVTNKIS-EVTDLLKKLPDLERLLSKIHNVGSPLKSQNH 838
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G +++ + + +++ +S+ L ++T
Sbjct: 839 PDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIGIMEEFIDDFKSKILKQVITLKTKN 898
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 899 PEGRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 958
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 959 QRNRIGCRTIVYWGIGRNRYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1018
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1019 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1062
>gi|395508080|ref|XP_003758343.1| PREDICTED: DNA mismatch repair protein Msh6 [Sarcophilus harrisii]
Length = 1424
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 258/702 (36%), Positives = 382/702 (54%), Gaps = 53/702 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+DA RRRP YDP T+++P DFL + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 439 RKDACRRRPDHPDYDPNTVHVPEDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYELYH 498
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 499 MDAIIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 558
Query: 419 E---KGSKDKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L P S YL+ + E + + R
Sbjct: 559 KLTHISRFDRVVRREICRIITKGTQTYS-VLDGEPSESNNKYLLCVKEKEEEASGHM--R 615
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C +D + + +GQ DD CS L++ P +I+ LS ET + +
Sbjct: 616 LYGVCFIDTSVGKFYMGQFSDDRHCSRFRTLVAHYTPAQILFEKGNLSAETRKVLKVSLS 675
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
+ + L P S+FWDA T+ + E K NVA DG+ LP +L
Sbjct: 676 SSIQESLTPGSQFWDAAKTL-------RTLLEEGYFKEKLNVA------DGVV-LPPVLK 721
Query: 593 ELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAK 643
+ S DS LSALGG +FYLKK +D LL A F E +P A
Sbjct: 722 SMTSESDSIGLTPNEKSELALSALGGCVFYLKKCLIDYELLSMANFEEYIPVDADMVKAV 781
Query: 644 KP---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
KP MVLDA L NLE+ +N+ +G + GTL +++ C T FGKRLL+ WL
Sbjct: 782 KPGAIFGKRDCRMVLDAVTLSNLEILQNAVNGSTEGTLLERIDSCCTPFGKRLLKQWLCA 841
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNS 751
PL N I +R DA+ L V + E L +LPD+ERLL ++ + ++
Sbjct: 842 PLCNPSSINDRLDAMEDLMAVPDKIS-EVVDLLKKLPDLERLLNKIHSVGSPLKSQKHPD 900
Query: 752 NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PG 804
++ ++YE+ +KK++ +F+SAL G ++M + + ++ N +S+ L ++T G
Sbjct: 901 SRAIMYEETTYSKKKIVDFLSALEGFKVMCKIVGIMEEVVGNFKSKILKQVITLRTQNSG 960
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + + L + AFD +A +G I P G D DYD A +K+ E SL +L++QR
Sbjct: 961 GRFPELTTELNRWDTAFDHEKARKTGIITPKTGFDSDYDQALVDIKDNEQSLLDYLEKQR 1020
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
K +G SI Y +GK+ Y LE+PES +P +YEL+S+KKG RYWT +I+K L +L
Sbjct: 1021 KRIGCRSIVYWGVGKNRYQLEIPESFTLHDLPGEYELKSTKKGCKRYWTKDIEKKLADLM 1080
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
AE ++ +LK ++RL F +++ W+ V A ++L
Sbjct: 1081 NAEERRDVSLKDCMRRLFFNFDKNYRDWQTAVECIAVFDVLL 1122
>gi|410954737|ref|XP_003984018.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Felis catus]
Length = 1228
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 260/700 (37%), Positives = 389/700 (55%), Gaps = 50/700 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 246 RRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 305
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA VG EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 306 MDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 365
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC V+TKGT T +L +P + YL++L E + + + R
Sbjct: 366 KMAHISKYDRVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--R 422
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 423 VYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLS 482
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTC 586
+ L L+P S+FWDA T+ + + E LN DS V Q +E D L
Sbjct: 483 SSLQEGLIPGSQFWDAAKTLRTL--LEEAYFKEKLN--DSGVMLPQVLKGMTSESDSLGL 538
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP 645
PG SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 539 TPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATRP 589
Query: 646 ---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 590 GAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL 649
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNK 753
+ I +R DA+ L V + + L ++PD+ERLL+++ S +N ++
Sbjct: 650 CSPYAINDRLDAIEDLMAVPDKIS-DVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSR 708
Query: 754 VVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKG 806
++YE+ +KK++ +F+SAL G +++ + ++ + +N +S+ L ++T P
Sbjct: 709 AIMYEETTYSKKKIIDFLSALEGFKVICKIIETMEEVADNFKSKILKQVITLQTKNPEGR 768
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + L + AFD +A +G I P G D DYD A ++E E SL ++L++QR
Sbjct: 769 FPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSR 828
Query: 867 LGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+G +I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L A
Sbjct: 829 IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA 888
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
E ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 889 EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 928
>gi|410954735|ref|XP_003984017.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Felis catus]
Length = 1359
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 260/700 (37%), Positives = 389/700 (55%), Gaps = 50/700 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 377 RRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA VG EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 437 MDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 496
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC V+TKGT T +L +P + YL++L E + + + R
Sbjct: 497 KMAHISKYDRVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--R 553
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 554 VYGVCFVDTSLGKFFIGQFPDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLS 613
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTC 586
+ L L+P S+FWDA T+ + + E LN DS V Q +E D L
Sbjct: 614 SSLQEGLIPGSQFWDAAKTLRTL--LEEAYFKEKLN--DSGVMLPQVLKGMTSESDSLGL 669
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP 645
PG SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 670 TPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDRVSATRP 720
Query: 646 ---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 721 GAVFAKANQRMVLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL 780
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNK 753
+ I +R DA+ L V + + L ++PD+ERLL+++ S +N ++
Sbjct: 781 CSPYAINDRLDAIEDLMAVPDKIS-DVADLLKKIPDLERLLSKIHNVGSPLKSQNHPDSR 839
Query: 754 VVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKG 806
++YE+ +KK++ +F+SAL G +++ + ++ + +N +S+ L ++T P
Sbjct: 840 AIMYEETTYSKKKIIDFLSALEGFKVICKIIETMEEVADNFKSKILKQVITLQTKNPEGR 899
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + L + AFD +A +G I P G D DYD A ++E E SL ++L++QR
Sbjct: 900 FPDLTIELNRWDTAFDHEKARRTGLITPKAGFDPDYDQALADIRENEQSLLEYLEKQRSR 959
Query: 867 LGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+G +I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L A
Sbjct: 960 IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA 1019
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
E ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1020 EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1059
>gi|355704543|gb|AES02262.1| mutS-like protein 6 [Mustela putorius furo]
Length = 1278
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 299/868 (34%), Positives = 456/868 (52%), Gaps = 60/868 (6%)
Query: 139 YDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSD 196
Y G+ E D E E V+ V +R R K+ V+ D E ++ + E D + +
Sbjct: 132 YSSGKSEDDDHEIESEEEVRPKVQGSRRSSRQIKKRRVISDSESDIGGSDVEFKPDGKEE 191
Query: 197 SSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGR---KRKSSGVKKSKSDGNAVNADFK 253
S D+ + VG D + V + K++ G KRKSS +K +
Sbjct: 192 GSSDEISSGVGDSDSEGLDSPVKVASKRKKMVTGNGSLKRKSS--RKEMPLATKRSTGIS 249
Query: 254 SPIIKPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKFHFLGPD-RRDAKRRRPGDVY 311
S + F + + S + G D + R + + +L D RRD +RRRP
Sbjct: 250 SETKSALNAFSAPQNSESQAHVSGGCDDNSRPTIWYHETLEWLKEDKRRDLQRRRPDHPD 309
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 310 FDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLV 369
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 370 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVR 429
Query: 429 REICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
REIC V+TKGT T +L +P + YL++L E + + + R +G+C VD + +
Sbjct: 430 REICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--RVYGVCFVDTSLGK 486
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L++ PV+++ LS ET+ + + L L+P S+F
Sbjct: 487 FFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLSSSLQEGLIPGSQF 546
Query: 546 WDAETTV-LEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTCLPGILSELISTG 598
WDA T+ + ++ Y + E LN+ DS V Q +E D L PG SEL
Sbjct: 547 WDAAKTLRMLLEEGYFK---EKLNE-DSGVLLPQVLKGMTSESDSLGLTPGEKSEL---- 598
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---------YMV 648
LSALGG +FYLKK +D+ LL A F E +P A +P MV
Sbjct: 599 -----ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAIRPGAVFAKGNQRMV 653
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
LDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL + I +R DA
Sbjct: 654 LDAVTLSNLEIFMNGTNGSTEGTLLEKIDSCHTPFGKRLLKQWLCAPLCSPYAINDRLDA 713
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKK 763
+ L + + L +LPD+ERLL+++ S +N ++ ++YE+ +KK
Sbjct: 714 IEDLMAEPDKIS-DVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKK 772
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL-----TPGKGLPAIVSILKHFK 818
++ +F+SAL G +++ + + I +N +S+ L ++ TP P + L +
Sbjct: 773 KIIDFLSALEGFKVICKIIEIMEEIADNFKSKILKQVITLQTKTPQGRFPDLTIELNRWD 832
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A +G I P G D DYD A ++E E SL ++L++QR +G +I Y IG
Sbjct: 833 TAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIG 892
Query: 879 KDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK +
Sbjct: 893 RNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDISLKDCM 952
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+RL F +++ W+ V A L ++L
Sbjct: 953 RRLFYNFDKNYKDWQSAVECIAVLDVLL 980
>gi|395829620|ref|XP_003787947.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 1 [Otolemur
garnettii]
Length = 1358
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 286/826 (34%), Positives = 429/826 (51%), Gaps = 67/826 (8%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSGVKKS 241
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 251 ISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSESEGLDSPVKVARKRKRMITGNGSH 310
Query: 242 KSDGN-----------AVNADFKSPIIK---PVKIFGSDKLSNGFDNPVMGDVSERFSAR 287
K G+ ++++ KS + P +S G GD S R +
Sbjct: 311 KRKGSRKEMPSTKRATGISSETKSTLSAFSAPQNSESQAHVSGG------GDDSSRPTIW 364
Query: 288 EADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI
Sbjct: 365 YHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVI 424
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
F+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQ
Sbjct: 425 FYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQ 484
Query: 407 TETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQ 463
TETPE +E R ++ DKVV+REIC V+TKGT T +L +P Y L +
Sbjct: 485 TETPEMMEARCRKMAHISKHDKVVRREICRVITKGTQTYS-VLEGDPSEDYSKYLLSLKE 543
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
S R +G+C VD + + +GQ DD CS L++ PV+++ LS ET
Sbjct: 544 KEDSSGHTRIYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVET 603
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSNVANSQAE 580
+ + + L L P S+FWDA T +LE +++ +S + + +E
Sbjct: 604 KTVLKGSLSSSLQEGLTPGSQFWDACKTLRILLEEGYFREKLSEDSGVMLPQVLKDMTSE 663
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS--- 636
D + PG SEL LSALGG +FYLKK +D+ LL A F E P
Sbjct: 664 SDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDI 714
Query: 637 ------GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
G M MVLDA L NLE+F+N +G + GTL +++ C T FGKRLL+
Sbjct: 715 VSATSPGAIFMKANQRMVLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQ 774
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---ASSEAN 747
WL PL + I +R DA+ L + E L +LPD+ERLL+++ + ++
Sbjct: 775 WLCAPLCSPYAISDRLDAIEDLMAFPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPMKSQ 833
Query: 748 GRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT--- 802
++ ++YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L I+T
Sbjct: 834 NHPDSRAIMYEETTYSKKKIIDFLSALEGFKVVCKIKDIMEEVVDDFKSKILKQIITLKT 893
Query: 803 -PGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
+G P + L + AFD +A +G I P G D DYD A ++E E SL ++L
Sbjct: 894 KSSQGHFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYL 953
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLL 919
++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 954 EKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKL 1013
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1014 ADLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECMAVLDVLL 1059
>gi|351695606|gb|EHA98524.1| DNA mismatch repair protein Msh6 [Heterocephalus glaber]
Length = 1363
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/698 (36%), Positives = 386/698 (55%), Gaps = 46/698 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 382 RRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 441
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 442 MDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 501
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ DKVV+REIC ++TKGT T +L +P + YL++L E + + + R
Sbjct: 502 KMAHISKYDKVVRREICRIITKGTQTY-SVLEGDPSENYSKYLLSLKEKEEDSSGHT--R 558
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 559 LYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVETKTILKGTLS 618
Query: 533 NPLVNDLVPLSEFWDAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE ++ ++ + + +E D + PG
Sbjct: 619 SSLQEGLIPGSQFWDATKTLQTLLEGGYFTEKLNEDTGVMLPTVLKGMSSESDSIGLTPG 678
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-----------LLPCSGF 638
SEL LSALGG +FYLKK +D+ LL A FE + P + F
Sbjct: 679 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSIRPGAIF 729
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
++ MVLDA L NLEVF N +G + GTL +++ C T FGKRLL+ WL PL +
Sbjct: 730 TKANQR--MVLDAVTLNNLEVFLNGTNGSTEGTLLERIDTCYTPFGKRLLKQWLCAPLCS 787
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---ASSEANGRNSNKVV 755
I +R DAV L V + E L +LPD+ERLL+R+ + ++ ++ +
Sbjct: 788 PFAINDRLDAVEDLMDVPDKIS-EVADLLKKLPDLERLLSRIHNVGSPLKSQKHPDSRAI 846
Query: 756 LYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLP 808
+YE+ +KK++ +F+SAL G ++M + + +++ +S+ L ++T P P
Sbjct: 847 MYEETTYSKKKIIDFLSALEGFKVMCKIVEIMEEVVDEFKSKILKQVITLQTKNPEGRFP 906
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
+ L + AFD +A +G I P G D DYD A ++E E SL ++L +QR +G
Sbjct: 907 DLTIELNRWDTAFDHEKARRTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRIG 966
Query: 869 DTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
+I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE
Sbjct: 967 CRTIVYWGIGRNRYQLEIPENFTTHNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEE 1026
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1027 RRDVSLKDCMRRLFYNFDKNYKDWQCAVDCIAVLDVLL 1064
>gi|395829624|ref|XP_003787949.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 3
[Otolemur garnettii]
Length = 1228
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 285/826 (34%), Positives = 431/826 (52%), Gaps = 67/826 (8%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSGVKKS 241
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 121 ISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSESEGLDSPVKVARKRKRMITGNGSH 180
Query: 242 KSDGN-----------AVNADFKSPIIK---PVKIFGSDKLSNGFDNPVMGDVSERFSAR 287
K G+ ++++ KS + P +S G GD S R +
Sbjct: 181 KRKGSRKEMPSTKRATGISSETKSTLSAFSAPQNSESQAHVSGG------GDDSSRPTIW 234
Query: 288 EADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI
Sbjct: 235 YHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVI 294
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
F+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQ
Sbjct: 295 FYKVGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQ 354
Query: 407 TETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQ 463
TETPE +E R ++ DKVV+REIC V+TKGT T +L +P Y L +
Sbjct: 355 TETPEMMEARCRKMAHISKHDKVVRREICRVITKGTQTYS-VLEGDPSEDYSKYLLSLKE 413
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
S R +G+C VD + + +GQ DD CS L++ PV+++ LS ET
Sbjct: 414 KEDSSGHTRIYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVET 473
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSNVANSQAE 580
+ + + L L P S+FWDA T +LE +++ +S + + +E
Sbjct: 474 KTVLKGSLSSSLQEGLTPGSQFWDACKTLRILLEEGYFREKLSEDSGVMLPQVLKDMTSE 533
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------L 632
D + PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 534 SDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDI 584
Query: 633 LPCSGFGD--MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + G M MVLDA L NLE+F+N +G + GTL +++ C T FGKRLL+
Sbjct: 585 VSATSPGAIFMKANQRMVLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQ 644
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---ASSEAN 747
WL PL + I +R DA+ L + E L +LPD+ERLL+++ + ++
Sbjct: 645 WLCAPLCSPYAISDRLDAIEDLMAFPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPMKSQ 703
Query: 748 GRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT--- 802
++ ++YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L I+T
Sbjct: 704 NHPDSRAIMYEETTYSKKKIIDFLSALEGFKVVCKIKDIMEEVVDDFKSKILKQIITLKT 763
Query: 803 -PGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
+G P + L + AFD +A +G I P G D DYD A ++E E SL ++L
Sbjct: 764 KSSQGHFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYL 823
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLL 919
++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 824 EKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKL 883
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 884 ADLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECMAVLDVLL 929
>gi|73970143|ref|XP_531814.2| PREDICTED: DNA mismatch repair protein Msh6 [Canis lupus
familiaris]
Length = 1283
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 259/700 (37%), Positives = 389/700 (55%), Gaps = 49/700 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D +IF+K+GKFYEL+
Sbjct: 300 RRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLIIFYKVGKFYELYH 359
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 360 MDALTGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 419
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDR 472
+ D+VV+REIC V+TKGT T +L +P + YL++L E + + + R
Sbjct: 420 KMAHISKYDRVVRREICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--R 476
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ PV+++ LS ET+ +
Sbjct: 477 VYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMILKGSLS 536
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ------AEGDGLTC 586
+ L L+P S+FWDA T+ + + E LN+ DS V Q +E D L
Sbjct: 537 SSLQEGLIPGSQFWDAAKTLRTL--LEEEYFKEKLNE-DSGVMLPQVLKGMTSESDSLGL 593
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP 645
PG SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 594 TPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYVPLDSDVVSATRP 644
Query: 646 ---------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL
Sbjct: 645 GAVFAKANQRMVLDAVTLSNLEIFMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPL 704
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NK 753
+ I +R DA+ L V + + L +LPD+ERLL+++ S +N ++
Sbjct: 705 CSPYAINDRLDAIEDLMVVPDKIS-DVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSR 763
Query: 754 VVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKG 806
++YE+ +KK++ +F+SAL G +++ + + +++N +S+ L ++T P
Sbjct: 764 AIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVVDNFKSKILKQVITLQTKNPEGR 823
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + L + AFD +A +G I P G D DYD A ++E E SL ++L++QR
Sbjct: 824 FPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSR 883
Query: 867 LGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+G +I Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+K L L A
Sbjct: 884 IGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINA 943
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
E ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 944 EERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 983
>gi|145348063|ref|XP_001418476.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578705|gb|ABO96769.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1113
Score = 422 bits (1086), Expect = e-115, Method: Compositional matrix adjust.
Identities = 254/727 (34%), Positives = 392/727 (53%), Gaps = 77/727 (10%)
Query: 282 ERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLR---------NLSEGQ 331
E++ AR+ KF F+ P++ +DA RRP D YDP TL LP F + +S GQ
Sbjct: 110 EQYDARDRLKFPFMQPEKIKDADGRRPDDPDYDPSTLLLPSTFPKMRDASGVQWTVSPGQ 169
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNV 391
QWW+FK+ + D V+ FKMGKFYE+FEMDAH+G ++L L YM+GEQPH GFPE+N++M+
Sbjct: 170 AQWWKFKAANFDSVLLFKMGKFYEMFEMDAHIGVRDLGLMYMRGEQPHAGFPEKNYAMHA 229
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDK-VVKREICAVVTKGTLTEGELLSANP 450
E+LAR G+RV+ +EQTETP QL R+K+ + VV+RE+ V+TKGT+ + +L+++P
Sbjct: 230 EQLARNGHRVVCIEQTETPAQLAERKKKDKTCKDTVVRREMVQVLTKGTMVDTGMLNSSP 289
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
DA+++ ++ + + + + G+C D T R ++G DD S L L+ELRPV
Sbjct: 290 DAAFVCSIIDGCEE---EDGEGWVGLCAADCGTGRFLVGAWRDDEGASCLRTALAELRPV 346
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
EI+ P LS + A+L ++ + +
Sbjct: 347 EILVPPTGLSARAKMAVL----------------------------DMCSHAQQRTFKST 378
Query: 571 DSNVANSQAEGDGL-----TCLPGILSELISTGDSGSQ--VLSALGGTLFYLKKSFLDET 623
+N A AE +G T LP + E+ T ++ + A G + YL+ + +D
Sbjct: 379 SANEALEDAEAEGYFKTLKTGLPEAIKEMRDTACHPARECGIGAWGTVVAYLRAALIDAD 438
Query: 624 LLRFAKFELLPCSGFGD------MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
L+ + E L + G A ++ +DA AL LEV EN+ +G S+GTL A L+
Sbjct: 439 LVPQGRVESLHTTDAGAREHLARWAHSTHVAMDAAALSGLEVLENT-AGGSAGTLLASLD 497
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
CV+ G+RLLR W+ RPL ++ IR RQ AV+ +RG RK L PD ER +
Sbjct: 498 RCVSGPGRRLLRRWVCRPLTSASAIRARQVAVSMMRGCGIEATGIARKLLRAAPDAERAI 557
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
+R+ SS GR+++ VVLYEDAA+ +L +F++AL G + A ++ A ++ E +
Sbjct: 558 SRVVGSSGEKGRSASHVVLYEDAARAKLNDFLAALEGIRAVRDATKAIAACVDACEKSDV 617
Query: 798 HHIL----------------TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
L G +P + S L + AFDW A +SGRI P GVD D
Sbjct: 618 LRALCIVNDAAATREDVFTAVGGVAMPDL-SALDEMESAFDWNAAKSSGRIEPAQGVDAD 676
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGD--TSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
D+A +++ +A L L+E R LG T + +V KD +L+EVP+ L VP +
Sbjct: 677 LDAAEEQLTAADADLASWLEEARGELGGHKTEVCFVNANKDTHLVEVPDRLASKVPHHWV 736
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
+KG+ R+ ++ L + AE +E AL + +R++ +FCE+ ++W+ AA+
Sbjct: 737 REGKRKGYERFTCDDLVPLRAKRVAAEEAREDALAGVFRRIVAKFCENASEWQ--AAASV 794
Query: 960 GLTLILL 966
G + +L
Sbjct: 795 GAIIDVL 801
>gi|332226866|ref|XP_003262610.1| PREDICTED: DNA mismatch repair protein Msh6, partial [Nomascus
leucogenys]
Length = 1290
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 287/830 (34%), Positives = 438/830 (52%), Gaps = 73/830 (8%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 181 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 240
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDK-------LSNGFDNPVMGDVSERFSA 286
K+ S +A ++ I +++F + + +S G GD S R +
Sbjct: 241 KRKSSRKETPSATKRATSISSETKNTLRVFSAPQNSESQAHISGG------GDDSSRPTV 294
Query: 287 READKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D V
Sbjct: 295 WYHESLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLV 354
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
I +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 355 ICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVE 414
Query: 406 QTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALT 459
QTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL++L
Sbjct: 415 QTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLK 473
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + + + R +G+C VD + + +GQ DD CS L++ PV+++ L
Sbjct: 474 EKEEDSSGHT--RVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL 531
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVAN 576
S ET+ + + L L+P S+FWDA T+LE ++T + +
Sbjct: 532 SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLTDDIGVMLPQVLKG 591
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE----- 631
+E D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 592 MTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPL 642
Query: 632 ---LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ + G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKR
Sbjct: 643 DSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKR 702
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSE 745
LL+ WL PL N I +R DA+ L V + E + L +LPD+ERLL+++ S
Sbjct: 703 LLKQWLCAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDIERLLSKIHNVGSP 761
Query: 746 ANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+N ++ ++YE+ +KK++ +F+SAL G ++M + + +++ +S+ L ++
Sbjct: 762 LKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKVIGIMEEVVDGFKSKILKQVI 821
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ P P + L + AFD +A +G I P G D DYD A ++E E SL
Sbjct: 822 SLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSL 881
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 882 LEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTI 941
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 942 EKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 991
>gi|410349455|gb|JAA41331.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 284/824 (34%), Positives = 430/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---- 237
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKRKRMVTGNGSL 310
Query: 238 ----VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
+K S S ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSESQSHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKVLKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>gi|410217568|gb|JAA06003.1| mutS homolog 6 [Pan troglodytes]
gi|410261614|gb|JAA18773.1| mutS homolog 6 [Pan troglodytes]
gi|410295678|gb|JAA26439.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 421 bits (1081), Expect = e-114, Method: Compositional matrix adjust.
Identities = 284/824 (34%), Positives = 430/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---- 237
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKRKRMVTGNGSL 310
Query: 238 ----VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
+K S S ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSESQSHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKVLKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>gi|194375916|dbj|BAG57302.1| unnamed protein product [Homo sapiens]
Length = 1230
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/824 (34%), Positives = 434/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 121 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 180
Query: 239 KKSKSDGNAVNADFKSPIIK-----PVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 181 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 240
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 241 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 300
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 301 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 360
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 361 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 419
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 420 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 477
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 478 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 537
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 538 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 588
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 589 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 648
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 649 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 707
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 708 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 767
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 768 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 827
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 828 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 887
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 888 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 931
>gi|332813367|ref|XP_003309101.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan troglodytes]
Length = 1399
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 284/824 (34%), Positives = 430/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---- 237
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 290 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKRKRMVTGNGSL 349
Query: 238 ----VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
+K S S ++ F + + S + GD S R + +
Sbjct: 350 KRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSESQSHVSGGGDDSSRPTVWYHETL 409
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 410 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 469
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 470 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 529
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 530 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 588
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 589 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 646
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 647 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 706
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 707 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 757
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 758 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 817
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 818 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 876
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 877 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKVLKQVISLQTKN 936
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 937 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 996
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 997 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1056
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1057 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1100
>gi|4504191|ref|NP_000170.1| DNA mismatch repair protein Msh6 [Homo sapiens]
gi|68067672|sp|P52701.2|MSH6_HUMAN RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6; AltName:
Full=G/T mismatch-binding protein; Short=GTBP;
Short=GTMBP; AltName: Full=MutS-alpha 160 kDa subunit;
Short=p160
gi|1294813|gb|AAC50461.1| G/T mismatch binding protein [Homo sapiens]
gi|6063479|gb|AAB39212.2| hMSH6 protein [Homo sapiens]
gi|13279008|gb|AAH04246.1| MutS homolog 6 (E. coli) [Homo sapiens]
gi|119620614|gb|EAX00209.1| mutS homolog 6 (E. coli), isoform CRA_b [Homo sapiens]
gi|123987976|gb|ABM83824.1| mutS homolog 6 (E. coli) [synthetic construct]
gi|307684536|dbj|BAJ20308.1| mutS homolog 6 [synthetic construct]
Length = 1360
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/824 (34%), Positives = 434/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>gi|19548099|gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens]
Length = 1358
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/824 (34%), Positives = 434/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>gi|1840467|gb|AAB47425.1| bacterial MutS homolog [Homo sapiens]
Length = 1360
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/824 (34%), Positives = 434/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>gi|2696086|dbj|BAA23674.1| GTBP-N [Homo sapiens]
Length = 1360
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/824 (34%), Positives = 434/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPIIK-----PVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>gi|397504284|ref|XP_003822731.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan paniscus]
Length = 1299
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 284/824 (34%), Positives = 429/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---- 237
ISD SD D K KE+ S DE V + E+ KV R RKR +G
Sbjct: 190 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGPNSPVKVARKRKRMVTGNGSL 249
Query: 238 ----VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
+K S S ++ F + + S + G D S R + +
Sbjct: 250 KRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSESQSHVSGGGDDSSRPTVWYHETL 309
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 310 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 369
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 370 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 429
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 430 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 488
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 489 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 546
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 547 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 606
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 607 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 657
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 658 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 717
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 718 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 776
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + S+ L +++
Sbjct: 777 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFRSKILKQVISLQTKN 836
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 837 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 896
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 897 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 956
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 957 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1000
>gi|395829622|ref|XP_003787948.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 2
[Otolemur garnettii]
Length = 1056
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/694 (36%), Positives = 381/694 (54%), Gaps = 38/694 (5%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 75 RRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 134
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 135 MDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 194
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFG 475
+ DKVV+REIC V+TKGT T +L +P Y L + S R +G
Sbjct: 195 KMAHISKHDKVVRREICRVITKGTQTYS-VLEGDPSEDYSKYLLSLKEKEDSSGHTRIYG 253
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
+C VD + + +GQ DD CS L++ PV+++ LS ET+ + + L
Sbjct: 254 VCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSVETKTVLKGSLSSSL 313
Query: 536 VNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
L P S+FWDA T +LE +++ +S + + +E D + PG S
Sbjct: 314 QEGLTPGSQFWDACKTLRILLEEGYFREKLSEDSGVMLPQVLKDMTSESDSIGLTPGEKS 373
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---------GFGDMA 642
EL LSALGG +FYLKK +D+ LL A F E P G M
Sbjct: 374 EL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYFPLDSDIVSATSPGAIFMK 424
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
MVLDA L NLE+F+N +G + GTL +++ C T FGKRLL+ WL PL + I
Sbjct: 425 ANQRMVLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAI 484
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVLYED 759
+R DA+ L + E L +LPD+ERLL+++ S +N ++ ++YE+
Sbjct: 485 SDRLDAIEDLMAFPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPMKSQNHPDSRAIMYEE 543
Query: 760 A--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----PGKG-LPAIVS 812
+KK++ +F+SAL G +++ + + ++++ +S+ L I+T +G P +
Sbjct: 544 TTYSKKKIIDFLSALEGFKVVCKIKDIMEEVVDDFKSKILKQIITLKTKSSQGHFPDLTV 603
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
L + AFD +A +G I P G D DYD A ++E E SL ++L++QR +G +I
Sbjct: 604 ELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRNRIGCRTI 663
Query: 873 TYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L +L AE ++
Sbjct: 664 VYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLADLINAEERRDV 723
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+LK ++RL F +++ W+ V A L ++L
Sbjct: 724 SLKDCMRRLFYNFDKNYKDWQSAVECMAVLDVLL 757
>gi|2662381|dbj|BAA23675.1| GTBP-ALT [Homo sapiens]
gi|2696085|dbj|BAA23673.1| GTBP-ALT [Homo sapiens]
Length = 1068
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 284/820 (34%), Positives = 431/820 (52%), Gaps = 61/820 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDN-PVMGDVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + GD S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
L AE ++ +LK ++RL F +++ W+ V A L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVL 1057
>gi|119620613|gb|EAX00208.1| mutS homolog 6 (E. coli), isoform CRA_a [Homo sapiens]
Length = 1068
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 257/715 (35%), Positives = 390/715 (54%), Gaps = 44/715 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP +D TLY+P DFL + + G ++WW+
Sbjct: 356 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQ 415
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 416 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 475
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 476 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 534
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 535 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 592
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + L L+P S+FWDA T+LE + +++
Sbjct: 593 QVLFEKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIG 652
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 653 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSM 703
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE + + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 704 ANFEEYIPLDSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 763
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL N I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 764 TCHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 822
Query: 738 ARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + + +
Sbjct: 823 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGF 882
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + L + AFD +A +G I P G D DYD A
Sbjct: 883 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 943 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 1002
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L
Sbjct: 1003 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVL 1057
>gi|426335494|ref|XP_004029255.1| PREDICTED: DNA mismatch repair protein Msh6 [Gorilla gorilla
gorilla]
Length = 1230
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 285/824 (34%), Positives = 435/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 121 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 180
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 181 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 240
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 241 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 300
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 301 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 360
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 361 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 419
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 420 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 477
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 478 ILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 537
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 538 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 588
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 589 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 648
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 649 CAPLCNPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 707
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 708 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 767
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 768 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 827
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 828 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 887
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 888 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 931
>gi|402890844|ref|XP_003908683.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Papio anubis]
Length = 1360
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/719 (35%), Positives = 397/719 (55%), Gaps = 44/719 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 356 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 415
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 416 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 475
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 476 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 534
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 535 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 592
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 593 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 652
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 653 VLLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 703
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 704 ANFEEYIPLDSDIVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 763
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 764 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 822
Query: 738 ARLF-ASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 823 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 882
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 883 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 943 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 1002
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1003 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>gi|388453415|ref|NP_001253005.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|380812114|gb|AFE77932.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|383417799|gb|AFH32113.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|384946650|gb|AFI36930.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
Length = 1360
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/719 (35%), Positives = 397/719 (55%), Gaps = 44/719 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 356 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 415
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 416 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 475
Query: 397 KGYRVLVVEQTETPEQLELRRKEK---GSKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 476 KGYKVARVEQTETPEMMEARCRKMVHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 534
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 535 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 592
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 593 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 652
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 653 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 703
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 704 ANFEEYIPLDSDIVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 763
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 764 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 822
Query: 738 ARLF-ASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 823 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 882
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 883 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 943 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 1002
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1003 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>gi|402890846|ref|XP_003908684.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Papio
anubis]
Length = 1230
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/719 (35%), Positives = 397/719 (55%), Gaps = 44/719 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 226 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 285
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 286 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 345
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 346 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 404
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 405 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 462
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 463 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 522
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 523 VLLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 573
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 574 ANFEEYIPLDSDIVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 633
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 634 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 692
Query: 738 ARLF-ASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 693 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 752
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 753 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 812
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 813 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 872
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 873 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 931
>gi|355565681|gb|EHH22110.1| hypothetical protein EGK_05312 [Macaca mulatta]
Length = 1235
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 256/719 (35%), Positives = 397/719 (55%), Gaps = 44/719 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 257 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 316
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 317 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 376
Query: 397 KGYRVLVVEQTETPEQLELRRKEK---GSKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 377 KGYKVARVEQTETPEMMEARCRKMVHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 435
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 436 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 493
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 494 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 553
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 554 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 604
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 605 ANFEEYIPLDSDIVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 664
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 665 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 723
Query: 738 ARLF-ASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 724 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 783
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 784 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 843
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 844 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 903
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 904 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 962
>gi|403260722|ref|XP_003922807.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1358
Score = 417 bits (1071), Expect = e-113, Method: Compositional matrix adjust.
Identities = 287/830 (34%), Positives = 431/830 (51%), Gaps = 73/830 (8%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 250 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 309
Query: 239 KKSKSDGNAVNADFK------------SPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA 286
K+ S A +A + S P +S G GD S R
Sbjct: 310 KRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSESQAHVSGG------GDDSSRPPV 363
Query: 287 READKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D V
Sbjct: 364 WYHETLEWLKEEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTPGMRKWWQIKSQNFDLV 423
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
I +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 424 ICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVE 483
Query: 406 QTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALT 459
QTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL++L
Sbjct: 484 QTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLK 542
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + S R +G+C VD + + +GQ DD CS L++ PV+++ L
Sbjct: 543 EKEED--SSGHIRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL 600
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVAN 576
S ET+ + + L L+P S+FWDA T+LE +++ + +
Sbjct: 601 SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLKG 660
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE----- 631
+E D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 661 MTSESDSIGLTPGERSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPL 711
Query: 632 ---LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ + G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKR
Sbjct: 712 DSDTVSTTRSGAVFTKAYQRMVLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKR 771
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSE 745
LL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL+++ S
Sbjct: 772 LLKQWLCAPLCSPYAINDRLDAIEDLMAVPDKIS-EVVELLKKLPDLERLLSKIHNVGSP 830
Query: 746 ANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+N ++ ++YE+ +KK++ +F+SAL G ++M + + +++ +S+ L ++
Sbjct: 831 LKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVVDGFKSKILKQVI 890
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ P P + L + AFD +A +G I P G D DYD A ++E E SL
Sbjct: 891 SLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSL 950
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 951 LEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTI 1010
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1011 EKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1060
>gi|149242560|pdb|2O8B|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G T MISPAIR
gi|149242564|pdb|2O8C|B Chain B, Human Mutsalpha (msh2/msh6) Bound To Adp And An
O6-methyl-guanine T Mispair
gi|149242568|pdb|2O8D|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G DU MISPAIR
gi|149242572|pdb|2O8E|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO A G T MISPAIR, WITH
ADP BOUND TO Msh2 Only
gi|149242576|pdb|2O8F|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO DNA WITH A SINGLE BASE
T INSERT
Length = 1022
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 258/719 (35%), Positives = 393/719 (54%), Gaps = 44/719 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP +D TLY+P DFL + + G ++WW+
Sbjct: 18 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQ 77
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 78 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 137
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 138 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 196
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 197 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 254
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + L L+P S+FWDA T+LE + +++
Sbjct: 255 QVLFEKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIG 314
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 315 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSM 365
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE + + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 366 ANFEEYIPLDSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 425
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL N I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 426 TCHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 484
Query: 738 ARLF-ASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + + +
Sbjct: 485 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGF 544
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + L + AFD +A +G I P G D DYD A
Sbjct: 545 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 604
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 605 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 664
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 665 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 723
>gi|297667664|ref|XP_002812092.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Pongo abelii]
Length = 1362
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 286/824 (34%), Positives = 435/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 253 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 312
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 313 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 372
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 373 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 432
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 433 KFYELYHMDALIGVTELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 492
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 493 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 551
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 552 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 609
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE +++ + + +E D
Sbjct: 610 ILKSSLSSSLQEGLLPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLRGMTSESD 669
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 670 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 720
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 721 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 780
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L RLPD+ERLL+++ S +N
Sbjct: 781 CAPLCNPFAINDRLDAIEDLMVVPDKIS-EVVELLKRLPDLERLLSKIHNVGSPLKSQNH 839
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 840 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 899
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 900 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 959
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 960 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1019
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1020 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1063
>gi|403260724|ref|XP_003922808.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1228
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 287/830 (34%), Positives = 431/830 (51%), Gaps = 73/830 (8%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 120 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 179
Query: 239 KKSKSDGNAVNADFK------------SPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA 286
K+ S A +A + S P +S G GD S R
Sbjct: 180 KRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSESQAHVSGG------GDDSSRPPV 233
Query: 287 READKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D V
Sbjct: 234 WYHETLEWLKEEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTPGMRKWWQIKSQNFDLV 293
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
I +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 294 ICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVE 353
Query: 406 QTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALT 459
QTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL++L
Sbjct: 354 QTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLK 412
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + S R +G+C VD + + +GQ DD CS L++ PV+++ L
Sbjct: 413 EKEED--SSGHIRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL 470
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVAN 576
S ET+ + + L L+P S+FWDA T+LE +++ + +
Sbjct: 471 SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLKG 530
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE----- 631
+E D + PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 531 MTSESDSIGLTPGERSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPL 581
Query: 632 ---LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ + G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKR
Sbjct: 582 DSDTVSTTRSGAVFTKAYQRMVLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKR 641
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSE 745
LL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL+++ S
Sbjct: 642 LLKQWLCAPLCSPYAINDRLDAIEDLMAVPDKIS-EVVELLKKLPDLERLLSKIHNVGSP 700
Query: 746 ANGRN--SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+N ++ ++YE+ +KK++ +F+SAL G ++M + + +++ +S+ L ++
Sbjct: 701 LKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVVDGFKSKILKQVI 760
Query: 802 T-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ P P + L + AFD +A +G I P G D DYD A ++E E SL
Sbjct: 761 SLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSL 820
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNI 915
++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I
Sbjct: 821 LEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTI 880
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 881 EKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 930
>gi|297667666|ref|XP_002812093.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Pongo
abelii]
Length = 1232
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 286/824 (34%), Positives = 435/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 123 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 182
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 183 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 242
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 243 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 302
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 303 KFYELYHMDALIGVTELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 362
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 363 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 421
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 422 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 479
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ + L L+P S+FWDA T+LE +++ + + +E D
Sbjct: 480 ILKSSLSSSLQEGLLPGSQFWDASKTLRTLLEEGYFREKLSDDIGVMLPQVLRGMTSESD 539
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 540 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 590
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 591 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 650
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L RLPD+ERLL+++ S +N
Sbjct: 651 CAPLCNPFAINDRLDAIEDLMVVPDKIS-EVVELLKRLPDLERLLSKIHNVGSPLKSQNH 709
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 710 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 769
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 770 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 829
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 830 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 889
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 890 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 933
>gi|291386823|ref|XP_002709926.1| PREDICTED: mutS homolog 6 [Oryctolagus cuniculus]
Length = 1361
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 256/697 (36%), Positives = 382/697 (54%), Gaps = 43/697 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRDA RRRP +D TL++P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 378 RRDAHRRRPDHPDFDASTLHVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 437
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R +
Sbjct: 438 MDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCR 497
Query: 419 EKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASY---LMALTESNQSPASQSTDR 472
+ D+VV+REIC ++TKGT T +L +P +Y L++L E + + + R
Sbjct: 498 KMAHISKHDRVVRREICRIITKGTQTYS-VLEGDPSENYSKFLLSLKEKEEDSSGHT--R 554
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + + +GQ DD CS L++ P +++ LS ET+ +
Sbjct: 555 VYGVCFVDTSLGKFSIGQFADDRHCSRFRTLVAHYPPAQVLFEKGNLSVETKAVLKGSLS 614
Query: 533 NPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ L L+P S+FWDA T+LE + ES + +E D + PG
Sbjct: 615 SSLQEGLIPGSQFWDAAKTLRTLLEEGYFTEKSNEESGVLLPQVLKGMTSESDSIGLTPG 674
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--- 645
SEL LSALGG +FYLKK +D+ LL A F E +P A +P
Sbjct: 675 EKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSATRPGAV 725
Query: 646 ------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
MVLDA L NLEVF N +G + GTL +++ C T FGKRLL+ WL PL +
Sbjct: 726 FSKASQRMVLDAVTLNNLEVFLNGTNGSTEGTLLEKIDTCYTPFGKRLLKHWLCAPLCSP 785
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVL 756
I +R DA+ L V + E L +LPD+ERLL+++ S +N ++ ++
Sbjct: 786 CAINDRLDAIEDLMAVPDKVS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIM 844
Query: 757 YEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPA 809
YE+ +KK++ +F+SAL G + M + + ++++ +S+ L ++T P P
Sbjct: 845 YEETTYSKKKIIDFLSALEGFKTMCKIVEVVEDVVDDFKSKLLTQVVTLQTKNPEGRFPD 904
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ L + AFD +A +G I P G D DYD A ++E E SL +L++QR +G
Sbjct: 905 LTMELHRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLDYLEKQRSRIGC 964
Query: 870 TSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE
Sbjct: 965 RTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEER 1024
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++ +LK ++RL F +++ W V A L ++L
Sbjct: 1025 RDLSLKDCMRRLFYNFDKNYKDWHSAVECIAVLDVLL 1061
>gi|148236863|ref|NP_001089247.1| mutS homolog 6 [Xenopus laevis]
gi|58399508|gb|AAH89270.1| MGC85188 protein [Xenopus laevis]
Length = 1340
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 292/861 (33%), Positives = 451/861 (52%), Gaps = 76/861 (8%)
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSE-DEEVDLVDEQENKVLRGR 231
+++++E D + E +DE + S SSD+ + V + +SE D E + D KV R
Sbjct: 227 RRIMIESDSDNEGSDDEFKPEDSASSDEA-SSGVDEAGLSEPDSEAE--DNSPVKVPLKR 283
Query: 232 KR----KSSGVKKSKSDGNAVNADFKSPIIKPVKI-FGSDKLSNGFDNPVMGDVSERFSA 286
KR K+SG KK + + S + K+ S F++ + S
Sbjct: 284 KRGIPDKASGPKKRLQNEQSETPKRTSNVSTEAKLKLSSFSAPESFESQANTGGTGAVSI 343
Query: 287 READKFHFL-GPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
E +KF +L R+D KR+R D YDP TLY+P DFL + G ++WW+ KS++ D V
Sbjct: 344 WEHEKFDWLQDGKRKDMKRKRQTDADYDPSTLYIPDDFLNKCTPGVRKWWQLKSQNFDTV 403
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
IF+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 404 IFYKVGKFYELYHMDAVIGVNELGLTFMKGTWAHSGFPEIAFGRFSDVLVQKGYKVSRVE 463
Query: 406 QTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALT 459
QTETPE +E R K D+VV+REIC ++TKGT T +L NP S YL+
Sbjct: 464 QTETPEMMEARCKSMSHPSKFDRVVRREICRIITKGTQTYS-VLDGNPSESHSKYLLCFK 522
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + Q R +G+ VD + + +GQ DD CS L++ PV+I+
Sbjct: 523 EKMDDSSGQR--RVYGVSFVDTSVGKFHVGQFEDDRHCSRFRTLVAHFPPVQILFEKGNP 580
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S +T++ + + L P S+FWDA T+ + E+ + D A
Sbjct: 581 SSDTKKVLKSCLSTSIQESLQPTSQFWDASRTL-------KTLAEEAYFEKDFQPAT--- 630
Query: 580 EGDGLTCLPGILSELISTGDS-----GSQ---VLSALGGTLFYLKKSFLDETLLRFAKF- 630
G+G LP +L + S DS G + LSALG ++YLKK +D+ LL A F
Sbjct: 631 -GNG--NLPSVLKSMTSESDSLALTPGEKCELALSALGACIYYLKKCLIDQELLSMANFE 687
Query: 631 ELLPCSG-----------FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
E +P F +++ MVLD L NLE+ +N +G + GTL +L+ C
Sbjct: 688 EYVPVDTDVEKAQTSSNFFAKTSRR--MVLDGVTLTNLEILQNGTNGSTEGTLLEKLDTC 745
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
T FGKRLL+ WL PL N I +R +AV L + + E + L +LPD+ERLL++
Sbjct: 746 STPFGKRLLKQWLCAPLCNPFSINDRLNAVEDLMALPGKVS-EVSELLKKLPDLERLLSK 804
Query: 740 LFASS---EANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTES 794
+ + ++ ++ V+YE+ +KK++ +F+S L G ++M + S + + + +S
Sbjct: 805 IHSIGSPLKSQNHPDSRAVMYEEITYSKKKIADFLSTLEGFKVMREVISIMEDDVAHFKS 864
Query: 795 RQLHHIL------TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
L I+ + G+ P + + LK + +FD +A +G I P G D DYD A K
Sbjct: 865 SILKQIVCVKDKASHGR-FPDLSAELKRWDTSFDHEKARKTGVITPKAGFDPDYDEALKD 923
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGF 907
VK+ E L ++L +QRK LG ++ Y K+ Y +E+PE++ ++P +Y L+S+KKGF
Sbjct: 924 VKQAEQDLNEYLDKQRKRLGCKTVVYWGTAKNRYQMEIPENIADRNLPEEYTLKSTKKGF 983
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILL- 966
RYWT I+K+ G+L AE +++ALK ++RL F +++ +W+ V A L +++
Sbjct: 984 KRYWTKAIEKMFGDLVNAEERRDAALKDCMRRLFYNFDKNYKEWQTAVECFAVLDVLISL 1043
Query: 967 -------DGSLLHAFLILQSN 980
DG + ++LQ N
Sbjct: 1044 SQYSQGGDGPVCRPEIVLQEN 1064
>gi|194388224|dbj|BAG65496.1| unnamed protein product [Homo sapiens]
Length = 1058
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 257/719 (35%), Positives = 393/719 (54%), Gaps = 44/719 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP +D TLY+P DFL + + G ++WW+
Sbjct: 54 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQ 113
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 114 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 173
Query: 397 KGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 174 KGYKVARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 232
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 233 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 290
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + L L+P S+FWDA T+LE + +++
Sbjct: 291 QVLFEKGNLSKETKTILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIG 350
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 351 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSM 401
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE + + G + K Y MVLDA L NLE+F N +G + GTL +++
Sbjct: 402 ANFEEYIPLDSDTVSTTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 461
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL N I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 462 TCHTPFGKRLLKQWLCAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 520
Query: 738 ARLF-ASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G +++ + + + +
Sbjct: 521 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVVCKIIGIMEEVADGF 580
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + L + AFD +A +G I P G D DYD A
Sbjct: 581 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 640
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 641 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 700
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 701 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 759
>gi|348507016|ref|XP_003441053.1| PREDICTED: DNA mismatch repair protein Msh6 [Oreochromis niloticus]
Length = 1381
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 261/704 (37%), Positives = 388/704 (55%), Gaps = 55/704 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D KRRR D YDP TLY+P DF+ ++ G ++WW+ KS+ D VIF+K+GKFYEL+
Sbjct: 391 RKDGKRRRQTDDDYDPSTLYVPNDFMNEITPGMRRWWQLKSEMFDTVIFYKVGKFYELYH 450
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G E+ L +MKG H GFPE F + L +KGY+V VEQTETPE +E R K
Sbjct: 451 MDAVIGVNEMGLTFMKGTWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPEMMEARCK 510
Query: 419 E--KGSK-DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDR 472
K +K D+VV+RE+C ++T+GT T +L P S +L++L E + S R
Sbjct: 511 TMLKPTKFDRVVRREVCRIITRGTQTYS-VLDGAPSESQSKFLLSLKEKAEEEGSGRC-R 568
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
+G+C VD + +GQ DD CS L L++ P E++ S ET + +
Sbjct: 569 TYGVCFVDTSVGCFHVGQFSDDRHCSRLRTLIAHYAPAEVLFEKGNPSVETRKILKASLS 628
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS-NVANSQAEGDGLTCLPGIL 591
+ L L ++FWDA+ T+ ++L++ D A + +G G + LP +L
Sbjct: 629 SALQEGLNAGTQFWDAQKTL------------KTLSEEDYFKEATGKEQGTGSSFLPALL 676
Query: 592 SELISTGDS-------GSQV-LSALGGTLFYLKKSFLDETLLRFAKFELL---------- 633
E+ S DS G ++ LSALGG +FYLKK +D+ LL A FE
Sbjct: 677 KEMTSESDSLCLTPKEGYELALSALGGCIFYLKKCLVDQELLSMANFEEYVPVDVEMEKA 736
Query: 634 --PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
P S F ++ MVLD L NLE+F+N SG + GTL +L+ C T FGKRLL+ W
Sbjct: 737 AGPASFFAKTRQR--MVLDGVTLVNLEIFQNG-SGGTEGTLLERLDTCSTPFGKRLLKQW 793
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANG 748
L PL N IR+R DAV L G Q A E L +LPD+ERLL+++ + ++
Sbjct: 794 LCAPLCNPTSIRDRLDAVEDLMGA-QAQATEVSDLLKKLPDLERLLSKIHSIGTPLKSQD 852
Query: 749 RNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL---TP 803
++ VLYE+ +K+++ +F+SAL G + M S + S L ++ +
Sbjct: 853 HPDSRAVLYEEVTYSKRKIADFLSALEGFKTMQDIISLFAPVSGEFHSTLLCQVISLNSE 912
Query: 804 GKGL-PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
GL P + LK + AFD +A +G I P G D +YD A +K E L +L
Sbjct: 913 KNGLFPDLSGELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALTGIKNCERELQDYLDR 972
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
Q+K LG S+++ GK+ Y +EVP+S+ +VP +YEL+S+KKG+ RY T +++ E
Sbjct: 973 QKKRLGCKSMSFWGTGKNRYQMEVPDSVSERNVPEEYELKSTKKGWKRYVTKETERMFSE 1032
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L E ++++ALK ++RL F ++++ W+ V A L ++L
Sbjct: 1033 LQGFEEKRDAALKDCMRRLFYNFDKNYSDWKTAVECMAVLDVLL 1076
>gi|355751303|gb|EHH55558.1| hypothetical protein EGM_04790 [Macaca fascicularis]
Length = 1235
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 255/719 (35%), Positives = 396/719 (55%), Gaps = 44/719 (6%)
Query: 278 GDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
GD S R + + +L + RRD RRRP ++ TLY+P DFL + + G ++WW+
Sbjct: 257 GDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQ 316
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS++ D VI +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +
Sbjct: 317 IKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQ 376
Query: 397 KGYRVLVVEQTETPEQLELRRKEK---GSKDKVVKREICAVVTKGTLTEGELLSANPD-- 451
KGY+V VEQTETPE +E R ++ D+VV+REIC ++TKGT T +L +P
Sbjct: 377 KGYKVARVEQTETPEMMEARCRKMVHISKYDRVVRREICRIITKGTQTYS-VLEGDPSEN 435
Query: 452 -ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+ YL++L E + + + R +G+C VD + + +GQ DD CS L++ PV
Sbjct: 436 YSKYLLSLKEKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPV 493
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESL 567
+++ LS ET+ + + L L+P S+FWDA T+LE +++ +
Sbjct: 494 QVLFEKGNLSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIG 553
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ +E D + PG SEL LSALGG +FYLKK +D+ LL
Sbjct: 554 VMLPQVLKGMTSESDSIGLTPGEKSEL---------ALSALGGCIFYLKKCLIDQELLSM 604
Query: 628 AKFE--------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
A FE ++ + G + K MVLDA L NLE+F N +G + GTL +++
Sbjct: 605 ANFEEYIPLDSDIVSTTRSGAIFTKACQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVD 664
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C T FGKRLL+ WL PL + I +R DA+ L V + E + L +LPD+ERLL
Sbjct: 665 TCHTPFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLL 723
Query: 738 ARLF-ASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENT 792
+++ S +N ++ ++YE+ +KK++ +F+SAL G ++M + + +++
Sbjct: 724 SKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDGF 783
Query: 793 ESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+S+ L +++ P P + + L + AFD +A +G I P G D DYD A
Sbjct: 784 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 843
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKG 906
++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG
Sbjct: 844 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKG 903
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 904 CKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 962
>gi|350582426|ref|XP_003354885.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial [Sus
scrofa]
Length = 1011
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 250/684 (36%), Positives = 379/684 (55%), Gaps = 43/684 (6%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 238 FDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLV 297
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 298 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVR 357
Query: 429 REICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
REIC V+TKGT T +L +P + YL++L E + + R +G+C VD + +
Sbjct: 358 REICRVITKGTQTYS-VLEGDPSENYSKYLLSLKEKEDDSSGHT--RVYGVCFVDTSLGK 414
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L++ PV+++ LS ET+ + + L L+P S+F
Sbjct: 415 FFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGSLSTETKMILKGSLSSSLQEGLIPGSQF 474
Query: 546 WDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
WDA T+LE +++ +S + +E D + PG SEL
Sbjct: 475 WDAGKTLRTLLEEGYFTDKLNEDSGVMLPQVLKGMTSESDSIGLTPGEKSEL-------- 526
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---------YMVLDAP 652
LSALGG +FYLKK +D+ LL A F E +P A +P MVLDA
Sbjct: 527 -ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDVVSASRPGAVFAKANQRMVLDAV 585
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L NLE+F N+ +G GTL +++ C T FGKRLL+ WL PL N I +R DA+ L
Sbjct: 586 TLNNLEIFLNATNGSPEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPYAISDRLDAIEDL 645
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQE 767
V + E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++ +
Sbjct: 646 MVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIID 704
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFD 822
F+SAL G +++ + + ++++ +S+ L +LT P P + L + AFD
Sbjct: 705 FLSALEGFKVICKIRGIMEEVIDDFKSKILKQVLTLQTKNPEGRFPDLTVELNRWDTAFD 764
Query: 823 WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+A +G I P G D DYD A ++E E SL ++L++QR +G +I Y IG++ Y
Sbjct: 765 HEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRY 824
Query: 883 LLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK ++RL
Sbjct: 825 QLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLF 884
Query: 942 GQFCEHHNKWRQMVAATAGLTLIL 965
F +++ W+ V A L ++L
Sbjct: 885 YNFDKNYKDWQAAVECIAVLDVLL 908
>gi|335285527|ref|XP_003354884.1| PREDICTED: DNA mismatch repair protein Msh6-like [Sus scrofa]
Length = 1362
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 250/684 (36%), Positives = 379/684 (55%), Gaps = 43/684 (6%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 392 FDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLV 451
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 452 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKYDRVVR 511
Query: 429 REICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
REIC V+TKGT T +L +P + YL++L E + + R +G+C VD + +
Sbjct: 512 REICRVITKGTQTY-SVLEGDPSENYSKYLLSLKEKEDDSSGHT--RVYGVCFVDTSLGK 568
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L++ PV+++ LS ET+ + + L L+P S+F
Sbjct: 569 FFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGSLSTETKMILKGSLSSSLQEGLIPGSQF 628
Query: 546 WDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
WDA T+LE +++ +S + +E D + PG SEL
Sbjct: 629 WDAGKTLRTLLEEGYFTDKLNEDSGVMLPQVLKGMTSESDSIGLTPGEKSEL-------- 680
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---------YMVLDAP 652
LSALGG +FYLKK +D+ LL A F E +P A +P MVLDA
Sbjct: 681 -ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDVVSASRPGAVFAKANQRMVLDAV 739
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L NLE+F N+ +G GTL +++ C T FGKRLL+ WL PL N I +R DA+ L
Sbjct: 740 TLNNLEIFLNATNGSPEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPYAISDRLDAIEDL 799
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRN--SNKVVLYEDA--AKKQLQE 767
V + E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++ +
Sbjct: 800 MVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKIID 858
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFD 822
F+SAL G +++ + + ++++ +S+ L +LT P P + L + AFD
Sbjct: 859 FLSALEGFKVICKIRGIMEEVIDDFKSKILKQVLTLQTKNPEGRFPDLTVELNRWDTAFD 918
Query: 823 WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+A +G I P G D DYD A ++E E SL ++L++QR +G +I Y IG++ Y
Sbjct: 919 HEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRY 978
Query: 883 LLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK ++RL
Sbjct: 979 QLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLF 1038
Query: 942 GQFCEHHNKWRQMVAATAGLTLIL 965
F +++ W+ V A L ++L
Sbjct: 1039 YNFDKNYKDWQAAVECIAVLDVLL 1062
>gi|344291831|ref|XP_003417633.1| PREDICTED: DNA mismatch repair protein Msh6 [Loxodonta africana]
Length = 1282
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 255/690 (36%), Positives = 383/690 (55%), Gaps = 55/690 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TL++P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 313 FDASTLFVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLV 372
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 373 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKHDRVVR 432
Query: 429 REICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
REIC ++TKGT T +L +P + YL++L E + + + R +G+C VD + +
Sbjct: 433 REICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDSSGHT--RVYGVCFVDTSLGK 489
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSE 544
+GQ DD CS L++ PV+++ LS ET R IL+ + + + + L+P S+
Sbjct: 490 FYVGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSAET-RMILKSSLSSSLQEGLMPGSQ 548
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS---- 600
FWDA T+ RI E D EG G+ LP +L + S DS
Sbjct: 549 FWDAAKTL--------RILLE-----DGYFTEKLNEGSGVM-LPQVLKGMTSESDSIGLT 594
Query: 601 ----GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---------Y 646
LSALGG +FYLKK +D+ LL A F E P A KP
Sbjct: 595 PGEKSELALSALGGCIFYLKKCLIDQELLSMANFEEYTPLDSDMVSAAKPGAIFVKANQR 654
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL PL + I +R
Sbjct: 655 MVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCHTPFGKRLLKQWLCAPLCSPFPINDRL 714
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVLYEDA--A 761
DA+ L V + E L +LPD+ERLL+++ S +N ++ ++YE+ +
Sbjct: 715 DAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYS 773
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKH 816
KK++ +F+SAL G ++M + + ++++ S+ L ++T P P + + LK
Sbjct: 774 KKKIIDFLSALEGFKVMCKIIEVMEEVVDDFNSKLLKQVITLQTKNPEGRFPDLTTELKR 833
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+ AFD +A +G I P G D DYD A ++E E SL ++L++QR +G +I Y
Sbjct: 834 WDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWG 893
Query: 877 IGKDLYLLEVPESLR-GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
IG++ Y LE+PES ++P +YEL+S+KKG RYWT I+K L L AE ++ +LK
Sbjct: 894 IGRNRYQLEIPESFTIRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDVSLKD 953
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++RL F +++ W+ V A L ++L
Sbjct: 954 CMRRLFYNFDKNYKDWQSAVECIAVLDVLL 983
>gi|296223907|ref|XP_002807586.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh6-like, partial [Callithrix jacchus]
Length = 1223
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 283/835 (33%), Positives = 428/835 (51%), Gaps = 83/835 (9%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V E E+ KV R RKR ++G +
Sbjct: 114 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGESESEGLNSPVKVARKRKRMATGNGSL 173
Query: 239 KKSKSDGNAVNADFK------------SPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA 286
K+ S A +A + S P +S G GD S R +
Sbjct: 174 KRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSESQAHVSGG------GDDSSRPTV 227
Query: 287 READKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
+ +L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D V
Sbjct: 228 WYHETLEWLKDEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTPGMRKWWQIKSQNFDLV 287
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
I +K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VE
Sbjct: 288 ICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVE 347
Query: 406 QTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDAS---YLMALT 459
QTETPE +E R ++ D+VV+REIC ++TKGT T +L +P + YL++L
Sbjct: 348 QTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYNKYLLSLK 406
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + + + R +G+C VD + + +GQ DD CS L++ PV+++ L
Sbjct: 407 EKEEDSSGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNL 464
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S ET+ + + L L+P S+FWDA T+ + + +
Sbjct: 465 SKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTL--------------LEEGYFREKL 510
Query: 580 EGDGLTCLPGILSELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
D LP +L +IS DS LSALGG +FYLKK +D+ LL A FE
Sbjct: 511 SDDIGVMLPQVLKGMISESDSIGLTPREKSELALSALGGCVFYLKKCLIDQELLSMANFE 570
Query: 632 --------LLPCSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
++ + G + K Y MVLDA L NLE+F N +G + GTL +++ C T
Sbjct: 571 EYIPLDSDIVSTTRSGAVFTKAYQRMVLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHT 630
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
FGKRLL+ WL PL + I +R DA+ L V + + E + L +LPD+ERLL+++
Sbjct: 631 PFGKRLLKQWLCAPLCSPYAINDRLDAIEDLMVVPEKIS-EVVELLKKLPDLERLLSKIH 689
Query: 742 -----ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
S+ + + + +KK++ +F+SAL G ++M + + +++ +S+
Sbjct: 690 NVGSPLKSQNHPDSRLXCMKXTTYSKKKIIDFLSALXGFKVMCKIIGIMEEVVDGFKSKI 749
Query: 797 LHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
L +++ P P + L + AFD +A +G I P G D DYD A ++E
Sbjct: 750 LKQVISLQTKNPEGRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRE 809
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRY 910
E SL ++L++QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RY
Sbjct: 810 NEQSLLEYLEKQRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRY 869
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
WT I+K L L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 870 WTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 924
>gi|405958979|gb|EKC25057.1| DNA mismatch repair protein Msh6 [Crassostrea gigas]
Length = 1346
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 260/692 (37%), Positives = 375/692 (54%), Gaps = 62/692 (8%)
Query: 309 DVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL 368
D YDP+TLY+P FL+ + +QWWE KSKH D V+FFKMGKFYELF MDA VG KEL
Sbjct: 381 DPEYDPKTLYVPDSFLKQQTPAMRQWWELKSKHYDAVLFFKMGKFYELFNMDAAVGVKEL 440
Query: 369 DLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG----SKD 424
L YMKGEQ H GFPE +S + L +KGY+V +EQTETP+ + R K G D
Sbjct: 441 GLIYMKGEQAHSGFPEIAYSRYADMLIQKGYKVARIEQTETPDMMTERVKNMGIPATKFD 500
Query: 425 KVVKREICAVVTKGT----LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVD 480
KVVKREIC + TKGT +T+G++ AN +SYL+AL E + QST +G+C VD
Sbjct: 501 KVVKREICRITTKGTQTFNVTDGDIAEAN--SSYLLALCEKDDGQFGQST---YGVCFVD 555
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV 540
+ +GQ DD CS L L++ PV+++ P +S +T I + + + L
Sbjct: 556 TTIGKFQMGQFTDDRYCSRLRTLIAHFTPVQVLMPRGRVSEKTSSLINNNLSSVIKEYLR 615
Query: 541 PLSEFWDAETTVLEIKNIYNR------ITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
P +EFWD+ T+ + + E L K S+ GD L CL
Sbjct: 616 PDTEFWDSSKTLKVLAEEEYFKCEEEVVWPECLKKMISD-------GDTL-CL------- 660
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC----------SGFGDMAK 643
S D S +S+LG ++YL+ S +D+ LL F E +P S F K
Sbjct: 661 -SAADEYSLAVSSLGAMIWYLQYSLMDQELLSMKNFEEYIPVDSEKTTIKEKSAF---MK 716
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+MVLD L NL+V + G GTL ++LN CVT FGKRL + WL PL N I
Sbjct: 717 NQHMVLDGLTLRNLDVAD--LYGSQEGTLLSRLNQCVTPFGKRLFKQWLCAPLCNPSSIN 774
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR---LFASSEANGRNSNKVVLYEDA 760
+R +AV L V A E + +LPD+ER+L++ L +++ ++ + +++A
Sbjct: 775 DRLNAVEDLNVVPDIMA-EVIDMIRKLPDLERILSKFHSLGSAARCKTHPDSRAIFFDEA 833
Query: 761 --AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----PGKGL-PAIVSI 813
+KK++++F+S + G ++ + + +EN S+ L + KGL P +
Sbjct: 834 KYSKKKIEDFLSTIEGFKVAQKVALKFKSHVENFTSKLLKQTMALDTDDDKGLFPDLKKE 893
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
L F +AFD +A G I+P+ GV +YDSA +K E L ++L QR+ LG ++T
Sbjct: 894 LDFFDNAFDHAKAKKDGVILPNKGVSPEYDSAKADLKAAERGLEEYLDRQRQRLGCRNLT 953
Query: 874 YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
Y GK+ Y +EVPES VP +Y L SSKKG RY T +I+ L +L+ AE K++AL
Sbjct: 954 YWGSGKNRYQIEVPESALKKVPDEYHLMSSKKGAKRYRTTDIEDQLVDLTDAEERKDAAL 1013
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
K ++RL F E + W + + L +++
Sbjct: 1014 KDTMRRLFYSFDERYKTWDTAIQCLSVLDVLM 1045
>gi|325188354|emb|CCA22891.1| PREDICTED: similar to G/T mismatch binding protein p [Albugo
laibachii Nc14]
Length = 1191
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 255/715 (35%), Positives = 380/715 (53%), Gaps = 75/715 (10%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D +L +R D RP YDPRTLY+PP+FL+ + QWWE KS++MD V+FFK
Sbjct: 203 DSLVWLKTERCDIDGNRPDSSNYDPRTLYVPPNFLKKETPAMIQWWEVKSRNMDTVLFFK 262
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYELF MDA VG KEL+L YMKGE+ H GFPE +L +KGYRV VEQTET
Sbjct: 263 VGKFYELFHMDADVGFKELNLIYMKGEKAHSGFPEIAHDKMASQLVQKGYRVARVEQTET 322
Query: 410 PEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
PE +++R K KVV+REIC++V+ G + G LLS +P + ++ L E S
Sbjct: 323 PEMMKIRNANSKQKSKVVRREICSMVSPGLNSFGCLLSDDP-CTRMLVLKEVQTKQGSAL 381
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
R +G+CV+D T+ LG+ D + L LL++ R VE I + + T++ I
Sbjct: 382 VPR-YGVCVLDTPTACFQLGEFNDTVQRDRLKTLLAQYRIVEFICERSETAKATKQIIKF 440
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKN------------IYNRITAESLNKADSNVANS 577
+ ++ +L SEFW A TV EI+N I +T+E+L + D +A
Sbjct: 441 GAPDAVITELKSGSEFWSASKTVQEIQNAQYFTNSGWPSSIAQYLTSENLVEIDGELA-- 498
Query: 578 QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLP-- 634
LSALGG ++ L++ +D+ LL F+ +P
Sbjct: 499 ---------------------------LSALGGCIWQLRRGIVDKELLSMCNFKNYIPSD 531
Query: 635 ------CSGFGDMAKKP-----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
C G P Y VLD+ L NLE+ N+R+G +G+L L+ T+F
Sbjct: 532 QQVRSSCQGTAVQMGTPELNQRYAVLDSQTLSNLEILRNNRNGKRNGSLINILDKTATSF 591
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-- 741
GKRL + W+ +PL I +R DAV L N + R +LPD+ER+L R+
Sbjct: 592 GKRLFQEWVVKPLCQVADITDRLDAVQELMA-NMETVTQIRNCFKKLPDLERVLFRIHTL 650
Query: 742 -ASSEANGRNSNKVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
++ A ++ ++YE +++++F++AL+G E ++ I ES L
Sbjct: 651 GSADRARDHPDSRAIMYESNTYNIRKIRDFVAALNGFESAMDLIEAITPIFAQFESSLLR 710
Query: 799 HILTPGKG----------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
+I+ P + L+ FK +FD A SG IIP GVD +YD+AC
Sbjct: 711 NIVQKSDSDGETERSAGQFPDLRKRLEFFKVSFDRESAQKSGVIIPETGVDPEYDAACID 770
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGK-DLYLLEVP-ESLRGSVPRDYELRSSKKG 906
++ +E +L ++L+EQ+K+L I+Y K D Y LE+P E++ P++YEL+S +KG
Sbjct: 771 IQRVEKALEEYLEEQKKILRCQQISYWGKKKDDRYQLEIPEEAITSKQPKEYELKSRRKG 830
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
F R+ TP I+KLL EL++ E ++E ALK ++R+ +F E+H +W Q V A L
Sbjct: 831 FKRFHTPKIRKLLAELTRTEEKREEALKDQMRRIFHKFDENHIEWVQAVRFLAVL 885
>gi|410901537|ref|XP_003964252.1| PREDICTED: DNA mismatch repair protein Msh6-like [Takifugu rubripes]
Length = 1373
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 252/688 (36%), Positives = 379/688 (55%), Gaps = 49/688 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TLY+P DFL ++ G ++WW+ KSK D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 399 YDPSTLYVPEDFLNRITPGMRRWWQLKSKMFDTVIFYKVGKFYELYHMDAVIGVNELGLT 458
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R K D+VV+
Sbjct: 459 FMKGTWAHSGFPEIGFGRFSDGLVQKGYKVARVEQTETPEMMEARCKAMAKPTKFDRVVR 518
Query: 429 REICAVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDRCFGICVVDVATSR 485
RE+C ++T+GT T +L P S +L++L E + +S + R +G+C VD +
Sbjct: 519 REVCRIITRGTQTY-SVLDGAPSESQSKFLLSLKEKAEEESSGRS-RTYGVCFVDTSVGY 576
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L L++ P E++ S ET + + + L L ++F
Sbjct: 577 FHVGQFPDDRHCSRLRTLIAHHSPAEVLFEKGNPSVETRKILKASLSSALQEGLSAGTQF 636
Query: 546 WDAETTVLEI-KNIYNRITAESLNKADSN-----VANSQAEGDGLTCLPGILSELISTGD 599
WDA+ T+ + + Y R A+ +N + +E D L P D
Sbjct: 637 WDAQKTLKTLSEEDYFREGADKGQAGGNNSPPPLLKQMTSESDALGLTP---------KD 687
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL------------PCSGFGDMAKKPYM 647
LSALGG +FYLKK +D+ LL A FE P S F ++ M
Sbjct: 688 GYDLALSALGGCIFYLKKCLVDQELLSMANFEEYVPVDVEMEKAAGPASFFAQTRQR--M 745
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
V+D L NLE+F+N SG S GTL +L+ C T FGKRLL+ WL PL N I++R D
Sbjct: 746 VVDGVTLANLEIFQNG-SGGSEGTLLERLDTCCTLFGKRLLKQWLCAPLCNPLSIKDRLD 804
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA-SSEANGRN--SNKVVLYEDA--AK 762
AV L G+ Q A E L +LPD+ERLL+++ + G++ ++ VLYE+ +K
Sbjct: 805 AVEDLMGL-QAQAGEVSDLLKKLPDLERLLSKIHGIGTPLKGQDHPDSRAVLYEEVTYSK 863
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT---PGKGL-PAIVSILKHFK 818
+++ +F+SAL G + M + S L ++ + +S L +++ G GL P + + L+ ++
Sbjct: 864 RKIADFLSALEGFKTMQEIISVLASVSGDCQSTLLRQVVSLKGEGGGLFPDLSAELRRWE 923
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A +G I P G D +YD A +K E L +L Q+K LG ++ Y G
Sbjct: 924 TAFDHQKARTTGVITPKAGFDPEYDQALAGIKTCEGELNDYLDRQKKRLGCKNMAYWGTG 983
Query: 879 KDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
++ Y +EVP+S+ ++PR+YE++S+KKG+ RY T ++L EL E +++SALK +
Sbjct: 984 RNRYQMEVPDSVSDRNIPREYEVKSTKKGWKRYVTRETERLFSELQGFEEKRDSALKDCM 1043
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+RL F +++ W+ V A L ++L
Sbjct: 1044 RRLFYNFDQNYKDWKTAVECMAVLDVLL 1071
>gi|242044644|ref|XP_002460193.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
gi|241923570|gb|EER96714.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
Length = 638
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/319 (61%), Positives = 250/319 (78%), Gaps = 2/319 (0%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M+LDA ALENLE+ EN R+G SGTLYAQLNHCVT FGKRLL+ W+A+PLY+ I RQ
Sbjct: 1 MILDAAALENLELLENMRTGGLSGTLYAQLNHCVTGFGKRLLKRWIAKPLYDRSAILRRQ 60
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
AVA +GV Q +A +FRK LSRLPDMERLLARLF+S + N R+S+ VV+YEDA+K+ LQ
Sbjct: 61 SAVATFKGVGQDYAAQFRKDLSRLPDMERLLARLFSSCDENKRSSS-VVVYEDASKRLLQ 119
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA 826
+F +AL GC+ M ACSS+ ++ TE QL+ +L+PGKGLP I SIL F+DAFDW EA
Sbjct: 120 QFTAALRGCQQMFHACSSISTLI-CTEGSQLNDLLSPGKGLPDISSILDRFRDAFDWSEA 178
Query: 827 NNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
+ +GRIIP G D +YD+ C ++EI++SL ++LKEQRKLL S+ YV +GKD+YL+EV
Sbjct: 179 DRNGRIIPCEGCDPEYDATCYAIEEIKSSLKEYLKEQRKLLRPASVNYVDVGKDMYLIEV 238
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
PESL GSVPR+YEL+S+KKGFFRYWTP +K+L+ ELS+AESEKES LK ILQ LI F E
Sbjct: 239 PESLGGSVPRNYELQSTKKGFFRYWTPELKELILELSKAESEKESKLKGILQNLIQLFVE 298
Query: 947 HHNKWRQMVAATAGLTLIL 965
HH +WRQ+V+ A L +++
Sbjct: 299 HHTEWRQLVSVVAELDVLI 317
>gi|15625580|gb|AAL04170.1|AF412834_1 mismatch repair protein Msh6 [Danio rerio]
Length = 1369
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 250/699 (35%), Positives = 382/699 (54%), Gaps = 45/699 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+DA+R+R D YDP TLY+P DFL + G ++WW+ KS+ D V+F+K+GKFYEL+
Sbjct: 377 RKDAQRKRQSDENYDPTTLYVPEDFLNRTTPGMRRWWQLKSEMFDTVLFYKVGKFYELYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL+L +MKG H GFPE F + L +KGY+V VEQTETP+ +E R K
Sbjct: 437 MDAVIGVNELNLTFMKGTWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPDMMEARCK 496
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSA--NPDASYLMALTESNQSPASQSTDRC 473
+ DKVVKRE+C ++T+GT T L A + YL+++ E ++ S
Sbjct: 497 KLARPTKFDKVVKREVCRIITRGTQTYSVLDGAPSETQSKYLLSIKEKSEE-DSTGHGHI 555
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G+C +D + R +GQ DD CS L L++ P ++I S ET + +
Sbjct: 556 YGVCFIDTSVGRFHIGQFQDDRHCSRLRTLVAHYSPAQVIFEKGNPSIETLKIFKAIVAS 615
Query: 534 PLVNDLVPLSEFWDAETT--VLEIKNIYNRITAESLNKADSNVANS----QAEGDGLTCL 587
L L S+FWDA+ T VL ++ + ++ NK +S + + +E D L+
Sbjct: 616 SLQEGLNAGSQFWDAQKTLKVLAEEDYFKE--SKDDNKKESVLPPALKAMTSECDALSLT 673
Query: 588 PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMA---- 642
P EL LSALGG +FYLKK +D+ L F E +P + A
Sbjct: 674 PKTGYEL---------ALSALGGCMFYLKKCLVDQELFSMGNFEEYVPVDVEMEQAGGAS 724
Query: 643 -----KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
MVLD L NLE+ +NS +G GTL +L+ C T FGKRLL+ W+ PL
Sbjct: 725 CFFAKTNQRMVLDGVTLANLEILQNSSTGGPEGTLLERLDTCCTPFGKRLLKQWICAPLC 784
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSNKV 754
N I +R DA+ L G + E L +LPD+ERLL+++ + + ++
Sbjct: 785 NPSSIGDRLDALEDLMGAPSQTS-EVTDLLKKLPDLERLLSKIHSMGTPLKGQDHPDSRA 843
Query: 755 VLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK----GL- 807
+LYE+ +K+++ +F++AL G ++M + S + + E +S+ L ++ GL
Sbjct: 844 ILYEEVVYSKRKIADFLAALEGFKVMKEIVSIMEPVGEGLKSKLLRQVVLLKTENEDGLF 903
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + LK + AFD +A +G I P G D +YD A +KE E L +L Q+K L
Sbjct: 904 PDLSPELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALNGIKECERDLQDYLDRQKKRL 963
Query: 868 GDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
G +++Y G++ Y LEVPES+ S+P +YE+RS+KKG+ RY T +I+++ EL E
Sbjct: 964 GCKNLSYWGTGRNRYQLEVPESVSERSLPEEYEVRSTKKGWKRYSTKDIERMFSELQSWE 1023
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++++ALK ++RL F +++ W+ V A L ++L
Sbjct: 1024 DKRDAALKDCMRRLFYNFDKNYKDWQTAVECMAVLDVLL 1062
>gi|33504503|ref|NP_878280.1| DNA mismatch repair protein Msh6 [Danio rerio]
gi|27882481|gb|AAH44350.1| MutS homolog 6 (E. coli) [Danio rerio]
Length = 1369
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 249/701 (35%), Positives = 379/701 (54%), Gaps = 49/701 (6%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+DA+R+R D YDP TLY+P DFL + G ++WW+ KS+ D V+F+K+GKFYEL+
Sbjct: 377 RKDAQRKRQSDENYDPTTLYVPEDFLNRTTPGMRRWWQLKSEMFDTVLFYKVGKFYELYH 436
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL+L +MKG H GFPE F + L +KGY+V VEQTETP +E R K
Sbjct: 437 MDAVIGVNELNLTFMKGTWAHSGFPEIGFGRFSDVLVQKGYKVARVEQTETPNMMEARCK 496
Query: 419 EKGSK---DKVVKREICAVVTKGTLTEGELLSA--NPDASYLMALTESNQSPASQSTDRC 473
+ DKVVKRE+C ++T+GT T L A + YL+++ E ++ S
Sbjct: 497 KLARPTKFDKVVKREVCRIITRGTQTYSVLDGAPSETQSKYLLSIKEKSEE-DSTGHGHI 555
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G+C +D + R +GQ DD CS L L++ P ++I S ET + +
Sbjct: 556 YGVCFIDTSVGRFHIGQFQDDRHCSRLRTLVAHYSPAQVIFEKGNPSIETLKIFKAIVAS 615
Query: 534 PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
L L S+FWDA+ T+ ++ AE +S N +A + LP L
Sbjct: 616 SLQEGLNAGSQFWDAQKTL--------KVLAEEDYFKESKDDNKKA-----SVLPPALKA 662
Query: 594 LISTGDSGSQV--------LSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMA-- 642
+ D+ S LSALGG +FYLKK +D+ L F E +P + A
Sbjct: 663 MTPECDALSLTPKTGYELALSALGGCMFYLKKCLVDQELFSMGNFEEYVPVDVEMEQAGG 722
Query: 643 -------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
MVLD L NLE+ +NS +G GTL +L+ C T FGKRLL+ W+ P
Sbjct: 723 ASCFFAKTNQRMVLDGVTLANLEILQNSSTGGPEGTLLERLDTCCTPFGKRLLKQWICAP 782
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS---EANGRNSN 752
L N I +R DA+ L G + E L +LPD+ERLL+++ + + +
Sbjct: 783 LCNLSSIGDRLDALEDLMGAPSQTS-EVTDLLKKLPDLERLLSKIHSMGTPLKGQDHPDS 841
Query: 753 KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK----G 806
+ +LYE+ +K+++ +F++AL G ++M + S + + E+ +S+ L ++ G
Sbjct: 842 RAILYEEVVYSKRKIADFLAALEGFKVMKEIVSIMEPVGEDLKSKLLRQVVLLKTENEDG 901
Query: 807 L-PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
L P + LK + AFD +A +G I P G D +YD A +KE E L +L Q+K
Sbjct: 902 LFPDLSPELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALNGIKECERDLQDYLDRQKK 961
Query: 866 LLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
LG +++Y G++ Y LEVPES+ S+P +YE+RS+KKG+ RY T +I+++ EL
Sbjct: 962 RLGCKNLSYWGTGRNRYQLEVPESVSERSLPEEYEVRSTKKGWKRYSTKDIERMFSELQS 1021
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
E ++++ALK ++RL F +++ W+ V A L ++L
Sbjct: 1022 WEDKRDAALKDCMRRLFYNFDKNYKDWQTAVECMAVLDVLL 1062
>gi|432906031|ref|XP_004077496.1| PREDICTED: DNA mismatch repair protein Msh6-like [Oryzias latipes]
Length = 1381
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 258/703 (36%), Positives = 387/703 (55%), Gaps = 53/703 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D KRRR D YDP +LY+P DFL ++ G ++WW+ KS+ D VIF+K+GKFYEL+
Sbjct: 391 RKDGKRRRQTDEDYDPTSLYVPEDFLNRITPGMRRWWQLKSEMFDTVIFYKVGKFYELYH 450
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA +G EL L +MKG H GFPE F+ + L KGY+V VEQTETPE +E R K
Sbjct: 451 MDAVIGVNELGLTFMKGTWAHSGFPEIGFARFSDVLVHKGYKVARVEQTETPEMMEARCK 510
Query: 419 --EKGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRC-- 473
K SK D+VV+RE+C +VT+GT T +L P S L + P +S+ C
Sbjct: 511 AMAKPSKFDRVVRREVCRIVTRGTQTYS-VLDGAPSESQSKFLLSLKEKPEEESSGHCRV 569
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G+C VD + +GQ DD CS L L++ P E++ S ET + + +
Sbjct: 570 YGVCFVDTSVGYFHVGQFPDDRHCSRLRTLIAHFAPAEVLFEKGNPSVETRKILKASLSS 629
Query: 534 PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC-LPGILS 592
L L S+FWDA+ T+ ++L++ D ++ E C LP +L
Sbjct: 630 ALQEGLHGGSQFWDAQKTL------------KTLSEEDYFKESAGEEKQTGGCFLPALLK 677
Query: 593 ELISTGDS-------GSQV-LSALGGTLFYLKKSFLDETLLRFAKFELL----------- 633
++ S DS G ++ LSALGG +FYLKK +D+ LL A FE
Sbjct: 678 KMTSESDSLCLSPKEGYELALSALGGCIFYLKKCLVDKELLSMANFEEYVPVDVEMAKAA 737
Query: 634 -PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
P S F + MVLD L NLE+F+N SG + GTL +L+ C T FGKRLL+ WL
Sbjct: 738 GPSSFFAQTRLR--MVLDGVTLANLEIFQNG-SGRTEGTLLERLDTCSTPFGKRLLKQWL 794
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA-SSEANGRNS 751
PL N I++R DA+ L G A E + L +LPD+ERLL+++ + + G++
Sbjct: 795 CAPLCNPTAIKDRLDALEDLMGAQA-QATEAAELLKKLPDLERLLSKIHSIGTPLKGKDH 853
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILTPG 804
++ VLYE+ +K+++ +F+SAL G + M + S+ + S RQL + T
Sbjct: 854 PDSRAVLYEEVTYSKRKIADFLSALEGFKTMQEIISNFAQVSAKFGSKLLRQLVSLKTEE 913
Query: 805 KGL-PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
GL P + + LK + AFD +A ++G I P G D +YD A ++ E L +L+ Q
Sbjct: 914 GGLFPDLSAELKRWDTAFDHQKARSTGVITPKAGFDPEYDQALAGIRSCERELNDYLERQ 973
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+K LG + + GK+ + +EVP+S+ ++P +YE++S+KKG RY T ++L +L
Sbjct: 974 KKRLGCKGMAFWGTGKNRFQMEVPDSVPERNIPEEYEVKSTKKGCKRYVTKETERLFSQL 1033
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
E ++++ALK ++RL F +++ W+ V A L ++L
Sbjct: 1034 QGLEEKRDAALKDCMRRLFYNFDKNYGDWKTSVECMAVLDVLL 1076
>gi|255084495|ref|XP_002508822.1| predicted protein [Micromonas sp. RCC299]
gi|226524099|gb|ACO70080.1| predicted protein [Micromonas sp. RCC299]
Length = 1419
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 277/770 (35%), Positives = 387/770 (50%), Gaps = 93/770 (12%)
Query: 241 SKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPD-R 299
S S G ++ A P++ P GS +L NP + ARE F +L PD R
Sbjct: 362 SSSGGKSLAAALSEPVLAPT---GSPEL-----NPA------HYEARERLMFPWLQPDKR 407
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR---------NLSEGQKQWWEFKSKHMDKVIFFKM 350
RDA RRP D YDP TL LP F + +S GQ QWW FK+ H D VI FKM
Sbjct: 408 RDASGRRPSDPEYDPTTLQLPGAFPKCKDATGKPFTVSPGQAQWWRFKAAHFDSVIMFKM 467
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYELFEMDAHVGA +L LQYMKGEQPHCGFPE+N++ N E+LAR G+RV+VVEQTETP
Sbjct: 468 GKFYELFEMDAHVGAADLGLQYMKGEQPHCGFPEKNYAANAERLARAGHRVVVVEQTETP 527
Query: 411 EQLELRR-KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE------SNQ 463
QL R+ +K KD VV RE AV+T+GTL + + A+PDA+Y +A+ E N+
Sbjct: 528 AQLAARKAADKSVKDNVVMREKVAVLTRGTLVDAGMTDASPDATYCVAILEVEDKPVENR 587
Query: 464 SPASQSTD------------RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
+P + D R G+C D AT R +LG +D L L+ L+PVE
Sbjct: 588 APKTDGADDGDDDGDDDEPARWMGVCAADCATGRFLLGAWREDAFAGGLRGALAALKPVE 647
Query: 512 IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
I+ +P P + D P + + +++ E L AD
Sbjct: 648 IVCAPGGATPRV---------MPALRDATP--DASIRSLSAASASSLHPDDVVERLTGAD 696
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSG--SQVLSALGGTLFYLKKSFLDETLLRFAK 629
+ LP L+ ++ G + L A G YL + +D L+ +
Sbjct: 697 GYFQSG--------ALPEALATFGASTTRGERAAALGAFGVMTGYLADAMIDRDLIPLGR 748
Query: 630 FELLP---CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
E +P +G + A+ ++ LDA AL LEV E S G G+L L+ C A G+R
Sbjct: 749 VEAIPGPDAAGI-EAARGGFVALDAAALVGLEVLEGS-DGGCVGSLLNALDRCAGAMGRR 806
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA 746
LLR W+ RPL ++ + RQ AV +R + E R+AL PD+ER +RL S
Sbjct: 807 LLRRWVCRPLRSAAAVAARQAAVREMRS-EKDAVAEARRALRAAPDLERAASRLVGQSGG 865
Query: 747 NGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT---- 802
GR++ VVLYEDAA+ +L F+ AL G + +A + + +S L I+T
Sbjct: 866 RGRDAANVVLYEDAARARLHGFLRALEGVRGVLRAVRAFDGVRSRLKSPALLAIVTEGDT 925
Query: 803 -----------------PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
G P + L F+ AFDW +A SGRI P G D D+A
Sbjct: 926 DDADTTWATNDAAWGACAGASTPELSERLAFFERAFDWDKARESGRIEPKPGADEAVDAA 985
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDT--SITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
+V + +L + L RK LG + + V+ KD +L EV ++L G VP D+
Sbjct: 986 DDRVCAADEALREWLVGTRKKLGGSKQDVNLVSANKDTHLCEVSDALAGKVPADWSREGK 1045
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
+KGF ++ P +K L E A +E AL+++L+ L+ +FC+ +WR+
Sbjct: 1046 RKGFEKFDCPELKALRAEREAAGEARELALENVLRALVAKFCDDWPRWRR 1095
Score = 46.6 bits (109), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 108 KRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEW 156
+RI V W ++ ++ G V ++D KH V+YDDG+DE + + ++W
Sbjct: 134 RRIAVLWKSERRYFAGNVAAYDAVNGKHHVRYDDGDDEWIATSRHDVKW 182
>gi|327262723|ref|XP_003216173.1| PREDICTED: DNA mismatch repair protein Msh6-like [Anolis
carolinensis]
Length = 1361
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 252/712 (35%), Positives = 384/712 (53%), Gaps = 47/712 (6%)
Query: 285 SAREADKFHFL-GPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
S E DK +L R+DA RRR D YDP T+++P D+L+N + G ++WWE KS++ D
Sbjct: 366 SVWEHDKIEWLKDGKRKDANRRRQNDPDYDPSTIFVPEDYLKNCTPGMRKWWELKSQYFD 425
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
V+F+K+GKFYEL+ MDA VG +L L +MKG H GFPE + L +KGY+V+
Sbjct: 426 CVLFYKVGKFYELYHMDAVVGVSKLGLAFMKGTWAHSGFPEIAYDRFSNTLVQKGYKVVR 485
Query: 404 VEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLS--ANPDASYLMAL 458
+EQ ETPE +E R K D+VV RE+C +++KGT T L ++ + YL+ +
Sbjct: 486 IEQMETPEMMEARCKSMAHPTKYDRVVHREVCRIISKGTQTYSILDGDFSDTHSKYLLCI 545
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
E + S +G+C VD + LGQ +DD CS L LL+ PV+I+
Sbjct: 546 KE--KCDDSAGLHYTYGVCFVDTTVGKFYLGQFLDDRHCSRLRTLLAHYPPVQILFERGN 603
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAE---TTVLEIKNIYNRITAESLNKADSNVA 575
S ET++ + + + L+ S+FW A T++E ++ S +
Sbjct: 604 PSGETQKILKSLLPSSVQEGLIAGSQFWKASKTLKTLIEEDYFQDKENPNSGVVLPPVIK 663
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF----- 630
+ AE D L PG SEL LSALG ++YLKK +D+ +L AKF
Sbjct: 664 SMTAESDSLGLTPGENSEL---------ALSALGCCIYYLKKCIIDKDILSMAKFEEYVP 714
Query: 631 -------ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
E+ S F ++ MVLD L NLE+ EN+ +G GTL +++ C T F
Sbjct: 715 VDIDIGKEIKTSSIFAKTNQR--MVLDGVTLANLEILENA-TGSPEGTLLERIDTCCTPF 771
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA- 742
GKRLL+ WL PL N I +R DAV L + E R L +LPD+ERLL+++ +
Sbjct: 772 GKRLLKQWLCAPLCNPCAINDRLDAVENLLAEAARVS-EIRDHLKKLPDLERLLSKIHSI 830
Query: 743 --SSEANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
S + N+ V+YE+ +KK++ +F+SAL G +++ + S L ++++ S+ L
Sbjct: 831 GFSLKNPNHPDNRAVMYEEGRYSKKKILDFLSALEGFKVVVEIISILEDVVDSFTSKILR 890
Query: 799 HILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+T P P + LK + AFD A +G I P G D DYD A + + IE
Sbjct: 891 QTVTLKSKNPEGCFPDLTEELKKWDAAFDHTTARKTGVINPKPGFDSDYDKAVEDITNIE 950
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWT 912
L ++L+EQRK LG ++ Y GK+ Y +E+ E+ + +P DY L+SS+KG+ RYWT
Sbjct: 951 EYLRQYLEEQRKRLGIRAMMYWGAGKNRYQIEIAETAVPRDLPNDYVLKSSRKGYKRYWT 1010
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+ +K+L ++ AE +++A K+ ++RL F ++ W+ V A L ++
Sbjct: 1011 KDTEKMLNKIVNAEERRDAAQKACMKRLFYDFDKNSRDWQAAVDCIAVLDVL 1062
>gi|328718270|ref|XP_001946118.2| PREDICTED: DNA mismatch repair protein Msh6-like [Acyrthosiphon
pisum]
Length = 1185
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 273/786 (34%), Positives = 412/786 (52%), Gaps = 73/786 (9%)
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLS 269
D DEEV V K+ G+ KS G KS N N + + K K + K+
Sbjct: 152 DDESDEEVSPV-----KIKSGKNTKSVG----KSKFNKFNKSYTPAVDKSTK--ETTKI- 199
Query: 270 NGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLS 328
NG D+ + K FL P++ +DA ++ P D Y+PRTLY+P DF L+
Sbjct: 200 NGVDHDNWPHL----------KLEFLKPEKIKDANKKSPSDPNYNPRTLYVPEDFKLTLT 249
Query: 329 EGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFS 388
G +QWWE K++H D ++FFK+GKFYE++ MDA AKEL+L YMKG+ H GFPE +
Sbjct: 250 PGVRQWWELKAQHFDCILFFKVGKFYEMYHMDAVTTAKELNLLYMKGDFAHVGFPETAYG 309
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSK-DKVVKREICAVVTKGTLTEGEL 445
L KGY V +EQTETP+ + R K +K +K DKVV+REIC + TKGT T G +
Sbjct: 310 RFSAILIEKGYTVARIEQTETPDMMTERCKSLKKSTKFDKVVRREICRITTKGTRTFGII 369
Query: 446 LSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
DA S+L+A++E S S+ +G+C +D + LGQ DD CS L L
Sbjct: 370 DGETNDAENSFLIAISEKEIS----SSTSLYGVCFIDTSIGLFHLGQFEDDCHCSRLRTL 425
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
+ PV+++ N L+ T++ I + + + L+P EFW + T++ +
Sbjct: 426 CAHYPPVQVLFERNKLTVRTKKVIDTMLSSAVKDALIPDIEFWPSSKTLITL-------- 477
Query: 564 AES-LNKADSNVANSQAEGDGLTCLPGILSEL-ISTGDSGSQVLSALGGTLFYLKKSFLD 621
AE K D+NV + L G S+L ++ D + +LG ++YL++ +D
Sbjct: 478 AEGDYFKHDNNVVYPEK----LKTFLGSDSDLQLNANDECEFGIRSLGAVIWYLQRCKMD 533
Query: 622 ETLLRFAKFELLPCSGFG-------DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
LL +F++ D +M+LDA L+NL + ENS +G ++GTL
Sbjct: 534 FQLLSRGRFDIYKPIDVKSVELTNQDNINSKHMILDAITLKNLHILENS-AGSNAGTLLN 592
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
+LNHC T FGKRLL WL PL I+ RQ+A++ L V E R L+ LPD+E
Sbjct: 593 KLNHCSTPFGKRLLHQWLCNPLTTISSIKARQNAISSLI-VIPDLMQEIRSELASLPDLE 651
Query: 735 RLLARLFASSEANGRNSN----KVVLYEDA--AKKQLQEFISALHG----CELMDQACSS 784
RL +R+++ S +NG S+ + V +E+ +K+++ +FIS L G +M++
Sbjct: 652 RLFSRIYSQS-SNGVESDHAETRAVYFEEKTYSKRKIIDFISILKGFRTSVNIMEKF-QK 709
Query: 785 LGAILENTESRQLHHILTPGKG-----LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
I EN+ES L I G P + +L +F+++FD EA GRI P G+D
Sbjct: 710 ADIIKENSESNLLAAICNYPNGSVPGVFPHLTELLDNFENSFDHDEAMKHGRIFPEPGMD 769
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
YD+ +K+KE++ L +LKEQ K G T + Y K Y LEVP++ YE
Sbjct: 770 DQYDTVLEKIKEVDIELKSYLKEQCKHFGCT-VNYFGSDKKRYQLEVPDAASKRAGDGYE 828
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
L++ +KG+ R+ T K+LL ++ E EK LK + +R+ +FC+ +W + A
Sbjct: 829 LQNQRKGYKRFTTNRTKELLEKMMSYEQEKIDVLKDLRERVFSRFCDKFEEWNNAIQCLA 888
Query: 960 GLTLIL 965
L + +
Sbjct: 889 TLDVFM 894
>gi|7012942|gb|AAF35250.1|AF227632_1 mismatch binding protein Mus3 [Zea mays]
Length = 629
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/315 (60%), Positives = 244/315 (77%), Gaps = 2/315 (0%)
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
D ALENLE+ EN+R+G SGTLYAQLNHCVT FGKRLL+ W+A+PLY+ I RQ AV
Sbjct: 1 DTAALENLELLENTRTGGLSGTLYAQLNHCVTGFGKRLLKRWIAKPLYDCREILRRQSAV 60
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
A +GV Q A +FRK LSRLPDMERLLARLF+S + N R+S+ VVLYEDA+KK LQ+F
Sbjct: 61 ATFKGVGQDCAAQFRKDLSRLPDMERLLARLFSSCDENKRSSS-VVLYEDASKKLLQQFT 119
Query: 770 SALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
SAL GC+ M ACSS+ ++ +E QL +L+PGKGL I SIL F+DAFDW +A+ +
Sbjct: 120 SALCGCQQMFHACSSISTLI-CSEGSQLIDLLSPGKGLSNISSILDRFRDAFDWSDADRN 178
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
GR IP+ G D ++D+ C ++EI++SL ++LKEQRKLL S+ YV +GKD+YL+EVPES
Sbjct: 179 GRFIPYEGCDPEFDATCNAIEEIKSSLKEYLKEQRKLLRPASVNYVNVGKDMYLIEVPES 238
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
L GSVPR+YEL+S+KKGF+RYWTP +K+L+ ELS+AESEKES LK+ILQ LI F EHH
Sbjct: 239 LGGSVPRNYELQSTKKGFYRYWTPELKELILELSKAESEKESKLKAILQNLIQLFVEHHT 298
Query: 950 KWRQMVAATAGLTLI 964
+WRQ+V+ A L ++
Sbjct: 299 EWRQLVSVVAELDVL 313
>gi|196016559|ref|XP_002118131.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
gi|190579257|gb|EDV19356.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
Length = 984
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 244/701 (34%), Positives = 374/701 (53%), Gaps = 51/701 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D+K R D YD RTL+LP FL+ + +QWW+ KS++ D V+ FK+GKFYE++
Sbjct: 18 RKDSKGRLQSDPEYDSRTLWLPSGFLKEQTPLMRQWWQIKSENFDSVLCFKVGKFYEMYH 77
Query: 359 MDAHVGAKELDLQYMKGEQ-----PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
MDA +G EL L M+ Q HCGFPE FS E LA++GYRV+ VEQTETP+ +
Sbjct: 78 MDALIGISELGLILMRVTQSSTAVAHCGFPEIAFSRYAETLAQRGYRVVRVEQTETPQMM 137
Query: 414 ELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSPASQ 468
E R K DKVV RE+C +TK T T +P++ ++L+A+ E + +
Sbjct: 138 EERVKSSTRPTKFDKVVNREVCGRITKATRTFSVQNYEDPNSENAFLLAIIERERDDLAV 197
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
G+C +D + LGQ DD CS L L++ +PV+I+ +S + +
Sbjct: 198 G-HSLLGVCFLDTTIGKFHLGQFTDDRQCSRLRTLVTHFQPVQILYERGKVSSKLQHIFQ 256
Query: 529 RHTRNPLVNDLVPLSEFWDAETT--VLEIKNIYNRITAE----SLNKADSNVANSQAEGD 582
+ + + L P SEFWD+ T +L K+ + + E SL+ + N EGD
Sbjct: 257 HDLLSAMKDALAPGSEFWDSNNTLKILSEKSYFTKDGNEADDASLDTWPETLRNF-VEGD 315
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSG---- 637
G I+ + +SALG +++YL K FLD L+ F E +P
Sbjct: 316 GFG---------ITAKEDYDLTVSALGASIWYLTKCFLDYDLMSLKNFEEYVPPDAPSPD 366
Query: 638 ---FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
G++ K +M+LDA L NL++ + GTL +L++CVT GKRL + WL
Sbjct: 367 RLVAGNILKHKHMILDAVTLINLDILPTASDSGLRGTLLEKLDYCVTPTGKRLFKHWLCT 426
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL--FASSEANGRNSN 752
PL + LI +R D+V L ++ + + L ++PD+E+L+ ++ SS + N
Sbjct: 427 PLCDPVLINDRLDSVEDLMAMSSAVS-DCLNTLRKIPDLEKLINKIHSLGSSRRSNHPDN 485
Query: 753 KVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-------- 802
K + +ED A K+++ EFIS ++G + + Q+ SL + +SR L I+T
Sbjct: 486 KAIFFEDTAYSKRKILEFISVINGFKTLLQSIESLQTNRDKMKSRLLLQIITYTGENFSG 545
Query: 803 -PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
GK P ++ ++ F+ AFD +A G+IIP G D +YD A + + EI+ L +L
Sbjct: 546 IKGK-FPQLLEYIQFFQKAFDHEQAKKDGKIIPKPGADPEYDDAIQSIAEIKQELEHYLD 604
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
Q+K L +I Y G++ Y +EVPES L P DYELRS KKGF R+WT +I L+
Sbjct: 605 SQKKRLNCRNIRYWGQGRNRYQIEVPESVLSRYTPNDYELRSRKKGFKRFWTGDILNLIE 664
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
L+ AE +++ALK ++R+ +F E++ W + A L
Sbjct: 665 SLTNAEERRDAALKDAMRRIFLKFDEYYENWNVAIQCVAVL 705
>gi|301117392|ref|XP_002906424.1| DNA mismatch repair protein Msh6, putative [Phytophthora infestans
T30-4]
gi|262107773|gb|EEY65825.1| DNA mismatch repair protein Msh6, putative [Phytophthora infestans
T30-4]
Length = 1245
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 249/723 (34%), Positives = 377/723 (52%), Gaps = 68/723 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D +L +RRD P YDPRTL +PP+F++ + QWWE KS++MD V+FFK
Sbjct: 252 DSLPWLHEERRDINGNTPDSPDYDPRTLKIPPEFVKKETPAMVQWWEVKSRNMDTVLFFK 311
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYELF MDA +G KEL+L YMKG++ H GFPE +S +L KGYRV VEQTET
Sbjct: 312 VGKFYELFHMDADIGFKELNLIYMKGDKAHSGFPEIAYSKMSSQLVAKGYRVARVEQTET 371
Query: 410 PEQLELRRKEKGSKDKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSP 465
P+ L++R K KVV+RE+C++++ GT T + + S + + YL+AL E+
Sbjct: 372 PDMLKVRNSSLAKKAKVVRREVCSLLSIGTNTVSFLDAPISSQDQVSKYLLALKEAFD-- 429
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
A+Q + R FG+C+VD +T L + D L + ++ VEI+ +S +T +
Sbjct: 430 ATQKSVR-FGVCMVDCSTGAFQLSEFDDTEQRDRLKTMFAQFHVVEIVTERFNISDDT-K 487
Query: 526 AILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+L+H + + L EFWDA T+ EI+ + G
Sbjct: 488 MVLKHAAPGAIRSSLRVGKEFWDASKTIDEIE----------------RAGYFKEHG--- 528
Query: 585 TCLPGILSELIS----TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL------- 633
PG + + G +SALGG +++L++ +D LL F+
Sbjct: 529 --WPGAVLYFLEMDKVVKSEGQLAISALGGCIWHLRRCLIDHELLSLCNFKRYKPSDEEA 586
Query: 634 --------PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
S + Y+VLD+ ++NLEV NS +G SG L ++ VT+FG+
Sbjct: 587 REARANREAMSAAKAELNQQYVVLDSQTIQNLEVLCNSFNGSRSGALIDIMDKTVTSFGR 646
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R+ + W+ +PL G I+ER DAV L G + +E R+ L +LPD+ERLL+R+ A
Sbjct: 647 RMFQEWVLKPLCKIGDIQERLDAVEEL-GTSGDLMMEIREFLRKLPDLERLLSRIHALGS 705
Query: 746 ANGRNSN---KVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + ++YE +++++F++ L+G + LG L + S L +
Sbjct: 706 AYRSKEHPDSRAIMYESQIYNVRKIKDFLAVLNGFDEAMNLTLELGPRLSQSNSPILQSL 765
Query: 801 LT-----------PGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
L +G P + L+ FK +FD A SG I+P G+D ++D+AC +
Sbjct: 766 LKRYAIEDGVQPDVNRGHFPDLTEKLEFFKRSFDQASAKKSGVIVPQAGIDPEFDAACAE 825
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGK-DLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ E+EA L +L EQR L I+Y K D Y LEVPES P++YEL+S KKG+
Sbjct: 826 IAEVEAELADYLSEQRSALRCRQISYWGKKKEDRYQLEVPESALSKQPKEYELKSRKKGY 885
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLD 967
R+ TP I+ LL L+ AE +KE ALK +R+ +F E + W + V A L ++
Sbjct: 886 KRFHTPTIRALLKRLATAEEQKEEALKDQTRRIFHKFDEDYKYWMKAVQCLAVLDCLVSL 945
Query: 968 GSL 970
G L
Sbjct: 946 GLL 948
>gi|47228957|emb|CAG09472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1235
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 259/686 (37%), Positives = 380/686 (55%), Gaps = 48/686 (6%)
Query: 309 DVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL 368
D YD TLY+P DFL ++ G ++WW+ KS+ D VIF+K+GKFYEL+ MDA VG EL
Sbjct: 284 DADYDAATLYVPEDFLNRVTPGMRRWWQLKSQMFDTVIFYKVGKFYELYHMDAVVGVNEL 343
Query: 369 DLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSK-DK 425
L +MKG H GFPE F + L +KGY+V VEQTETPE +E R K K SK D+
Sbjct: 344 GLTFMKGTWAHSGFPEIGFGRFSDGLVQKGYKVARVEQTETPEMMEARCKAMAKPSKFDR 403
Query: 426 VVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
VV+RE+C V+T+GT T L A + + +L+ L E + +S + R +G+C VD +
Sbjct: 404 VVRREVCRVLTRGTQTYSVLDGAPAECQSKFLLGLKEKAEEESSGRS-RTYGVCFVDASV 462
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+GQ DD CS L L++ P E++ S ET + + + L L S
Sbjct: 463 GCFHVGQFADDRHCSRLRTLIAHHPPAEVLFERGNPSGETRKVLKASLSSALQEGLSAGS 522
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--- 600
+FWDA+ T+ +SL++ D + +G LP L ++ S DS
Sbjct: 523 QFWDAQKTL------------KSLSEEDYFREGADEGQEGRRALPAPLKQMTSDSDSLGL 570
Query: 601 ----GSQV-LSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP--------- 645
G ++ LSALG FYLKK +D+ LL A F E +P + A P
Sbjct: 571 TPRDGYELALSALGACTFYLKKCLVDQELLSMANFEEYVPVDVQMEKAAGPDSFFAQTRQ 630
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
MV+D L NLE+F+N SG + GTL +L+ C T FGKRLL+ WL PL N I+ER
Sbjct: 631 RMVVDGVTLANLEIFQNG-SGGAEGTLLERLDTCSTPFGKRLLKQWLCAPLCNPSSIKER 689
Query: 706 QDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA-SSEANGRN--SNKVVLYEDA-- 760
DAV L G+ Q A E L +LPD+ERLL+++ + G++ ++ VLYE+
Sbjct: 690 LDAVEDLMGL-QAQAGEVSDLLKKLPDLERLLSKIHGIGTPLKGQDHPDSRAVLYEEVTY 748
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILTPGKGL-PAIVSILKH 816
+K+++ +F+SAL G + M + S L A+ + S RQ+ + G GL P + L+
Sbjct: 749 SKRKIADFLSALEGFKTMQEIISVLAAVSGDCRSTLLRQVIRVKREGGGLFPDLSVELRR 808
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
++ AFD +A N+G I P G D +YD A ++ E L +L QRK LG ++ Y
Sbjct: 809 WEKAFDHQKARNTGVITPKAGFDPEYDQALAGIRGREGELNDYLDRQRKRLGCRNMAYWG 868
Query: 877 IGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
G++ Y +EVP+S+ SVP++YE++S+KKG+ RY T ++L EL E ++++ALK
Sbjct: 869 TGRNRYQMEVPDSVSERSVPQEYEVKSTKKGWKRYVTKETERLFSELQAFEEKRDAALKD 928
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGL 961
++RL F +++ W+ V A L
Sbjct: 929 CMRRLFYNFDKNYRDWKAAVECMAVL 954
>gi|443734707|gb|ELU18588.1| hypothetical protein CAPTEDRAFT_139957, partial [Capitella teleta]
Length = 1270
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 278/832 (33%), Positives = 417/832 (50%), Gaps = 68/832 (8%)
Query: 173 KKVVVED--DEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRG 230
K+ ++E+ DE++ ED+ DSS DD ++ V E E D E E+ V
Sbjct: 161 KRRIIENNSDEDLSESEDDFKPGIIDSSSDDESEAV------ESSEPDTASESESPVKSQ 214
Query: 231 RKRK-------SSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSER 283
+KRK S +K S++ + + K KP D+ + D
Sbjct: 215 QKRKRNHDSQPSPMLKPSRTLQSFMTPSPKPNSEKPFTPSVGDRTISKLAAFSAPDTPST 274
Query: 284 FSAREADKF-----HFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
SA + + FL P + RDA++R YD RT+Y+P FL + +QWW+
Sbjct: 275 PSAEDGRVYPHMIEDFLQPGKMRDAEKRTRDHPEYDARTIYVPDAFLNKQTPAMRQWWQL 334
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARK 397
K+KH D ++FFKMGKFYELF MDA + EL L YMKGEQ H GFPE + E L +K
Sbjct: 335 KAKHFDTILFFKMGKFYELFHMDATIAVNELGLIYMKGEQAHAGFPEIAYGRYAETLIQK 394
Query: 398 GYRVLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGT----LTEGELLSANP 450
GY+V +EQTETP+ ++ R RK +G+ DKVV RE+C+V TKGT +G+ S
Sbjct: 395 GYKVGRIEQTETPDMVQERVRKSEGATKYDKVVARELCSVQTKGTKRYSFLDGD--SGET 452
Query: 451 DASYLMALTESNQSPASQSTDRC--FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
+++L+A+ E S D C FG+C +D + +GQ DD S L L S
Sbjct: 453 SSAHLLAVKE------VPSADNCSSFGVCFIDTSVGTFHVGQFTDDRHQSRLRTLTSHYP 506
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESL 567
V+++ +S E + L H + + + L P S+FWD T+ E+ ES
Sbjct: 507 VVQVLFERGNVS-ERLNSFLGHQMSAAIREPLKPNSQFWDGSRTLKELSEGSYFTEEESP 565
Query: 568 NKADSNVANS-QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
A + Q E D L P SEL LSALG ++YL++S +D L+
Sbjct: 566 TAAWPEALKAMQDEADPLGKTPREGSEL---------ALSALGAVIWYLRESLIDHELIS 616
Query: 627 FAKFELL-----PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
FE+ D K MVLD L NLE+ +N G + GTL LN C T
Sbjct: 617 MRNFEVYHPLDSEAKEVSDFTNKK-MVLDGVTLNNLEILQNGEGG-TEGTLLDHLNRCST 674
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR-- 739
FGKRL + WL P S I +R DAV L + A E + L +LPD+ERLL++
Sbjct: 675 PFGKRLFQQWLCAPSCQSSTINDRLDAVEDLMALPD-LAAEAQDFLRKLPDLERLLSKIH 733
Query: 740 -LFASSEANGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ + ++ + +ED A K+++++F+SAL G L + A ++ +++
Sbjct: 734 TLGSAKRSQDHPDSRAIFFEDVAYSKRKIEDFLSALAGFALGMKIAKLFSA--KDVKAKL 791
Query: 797 LHHILT---PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
L +T G P + L F+ +FD +A G I P GVD DYD A +K ++
Sbjct: 792 LKKTVTLDCNGGRFPDLTEQLDFFEQSFDQKKAKTEGVIKPSKGVDPDYDFALSDMKLVQ 851
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L +L +Q+ LG +I + GK+ + +E+PE + VP +YEL SSKKG RY T
Sbjct: 852 QQLDDYLDKQKSRLGCRNIVFWGSGKNRFQMEIPEGVAKKVPNEYELTSSKKGHKRYRTR 911
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I++LL ++ AE ++ AL+ +++R+ QF +H W V + + +++
Sbjct: 912 EIERLLAQMVDAEERRDVALRDVMRRIFAQFDKHAESWNCAVQCLSLIDVLI 963
>gi|170285324|gb|AAI61405.1| LOC100145639 protein [Xenopus (Silurana) tropicalis]
Length = 978
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 236/652 (36%), Positives = 348/652 (53%), Gaps = 47/652 (7%)
Query: 285 SAREADKFHFLGPDRR-DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
S + +KF +L RR D KR++ D YDP TLY+P DFL + G ++WW+ KS++ D
Sbjct: 342 SVWDHEKFDWLQDGRRKDLKRKKQNDADYDPSTLYVPDDFLNKCTPGMRKWWQLKSQNFD 401
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
VIF+K+GKFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V
Sbjct: 402 TVIFYKVGKFYELYHMDAVIGVNELGLTFMKGAWAHSGFPEIAFGRFSDVLVQKGYKVAR 461
Query: 404 VEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMA 457
VEQTETPE +E+R K D+VV+REIC ++TKGT T +L NP S YL+
Sbjct: 462 VEQTETPEMMEVRCKSMSHPSKFDRVVRREICRIITKGTQTYS-VLDGNPSESHSKYLLC 520
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
E + Q R +G+ VD + + +GQ DD CS L++ P++I+
Sbjct: 521 FKEKMDDSSGQR--RIYGVSFVDTSVGKFHVGQFEDDRHCSRFRTLVAHFPPIQILFEKG 578
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVA 575
S +T++ + + L P S+FWDA T+ L + + + + +
Sbjct: 579 NPSSDTKKVLKSCLSTSIQESLQPTSQFWDAFKTLKTLAEEAYFEKDFQPGSGNLPTVLK 638
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLP 634
N +E D L PG SEL LSALG ++YLKK +D+ LL A F E +P
Sbjct: 639 NLTSENDSLALTPGEKSEL---------ALSALGACIYYLKKCLIDQELLSMANFEEYIP 689
Query: 635 C-----------SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
S F +++ MVLD L NLE+ +N +G + GTL +L+ C T F
Sbjct: 690 VDTGIEKAQASSSFFAKTSQR--MVLDGVTLTNLEILQNGTNGSTEGTLLEKLDTCSTPF 747
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
GKRLL+ WL PL N I +R +AV L + + E L +LPD+ERLL+++ +
Sbjct: 748 GKRLLKQWLCAPLCNPFSINDRLNAVEDLMDLPDKVS-EVSDLLKKLPDLERLLSKIHSI 806
Query: 744 S---EANGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
++ ++ V+YE+ A KK++ +F+SAL G ++M + S L N +S L
Sbjct: 807 GSPLKSQNHPDSRAVMYEEIAYSKKKIADFLSALEGFKVMREVISILEDAAANFKSSILK 866
Query: 799 HIL-----TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
I+ TP P + + LK + +FD +A +G I P G D DYD A K +K E
Sbjct: 867 QIVSIKGKTPQGHFPDLSAELKRWDTSFDHEKARKTGVITPKVGFDPDYDEALKDIKTTE 926
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSK 904
L ++L +QRK L ++ Y K+ Y +E+PES+ ++P +YEL+ K
Sbjct: 927 QDLNEYLDKQRKRLSCKTVVYWGTAKNRYQMEIPESVTERNLPEEYELKKKK 978
>gi|260815207|ref|XP_002602365.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
gi|229287674|gb|EEN58377.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
Length = 1278
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 282/836 (33%), Positives = 427/836 (51%), Gaps = 82/836 (9%)
Query: 208 KEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVN--ADFKSPIIK------- 258
++D+SE E + E K R RKR+ + K+ S G A + F +P +
Sbjct: 211 EKDISE-PETESEPESPIKPTRKRKREPA---KTPSRGKAKPDLSSFSTPSSRLGTPSST 266
Query: 259 -----PVKIFGSDKLSNG----FDNPVMGDVSERFSAREADKFHFLGP-DRRDAKRRRPG 308
V+ G+ + + F P + SE + + + + FL + RDAK+R P
Sbjct: 267 ATPGGTVRTPGAHQNTKNKLAMFSAP---EGSEEKAKFDHETYEFLQEGNIRDAKKRLPT 323
Query: 309 DVYYDPRTLYLPPDFL-RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKE 367
D YDPRTLY+P FL +N + ++WWE KS+ D V+FFK+GKFYEL+ MDA G E
Sbjct: 324 DEDYDPRTLYVPDSFLMKNTTPLMRKWWEVKSQLYDTVLFFKVGKFYELYHMDAITGVNE 383
Query: 368 LDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE--LRRKEKGSK-D 424
L L +MKG Q HCGFPE + + L +KGYRV +EQTET Q E R+ K +K D
Sbjct: 384 LGLIFMKGSQAHCGFPEIAYGRYSDTLVQKGYRVARIEQTETVPQSEERYRKLAKPTKFD 443
Query: 425 KVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTE-SNQSPASQSTDRCFGICVVDV 481
KVV+RE+C + TKGT T L +A SYL+A+ E +N+ A + +G+C VD
Sbjct: 444 KVVRREVCRITTKGTKTYSFLEGDTGEAANSYLLAIAEKANEDIAGDQS--VYGVCFVDT 501
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVP 541
+ + +GQ DD S L L+++ P +++ LS +T+ +IL + + + +
Sbjct: 502 SIGKFHIGQFQDDRHSSRLRTLIAQYTPSQVLFERGKLSSKTQ-SILNSNLSTALREALS 560
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
SEFWDA T+ + AE S E G +C P L ++ S DS
Sbjct: 561 SSEFWDAPKTL--------KFLAE--KSYFSETGTEDEEETGDSCWPQALKKMTSDADSL 610
Query: 602 SQV--------LSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP------- 645
+S+LG ++YLK+ ++DE +L F E P + +K
Sbjct: 611 GLTASDDYELGVSSLGAVVWYLKRCYIDEEMLSMCNFEEYTPVDSQAGVTEKSAPDFTTG 670
Query: 646 --YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+MVLD L NLE+ ENS +G GTL +L+ C T FGKRL + WL PL N I
Sbjct: 671 KQHMVLDGVTLNNLEIIENSVTGSREGTLLDRLDMCCTPFGKRLFKQWLCAPLCNPASIN 730
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN----KVVLYED 759
+R DAV L A E + L ++PD+ERLL ++ A RN + + V +ED
Sbjct: 731 DRLDAVEDLMACRDVVA-EVTEILRKVPDLERLLQKIHTLGLAR-RNKDHPDGRAVFFED 788
Query: 760 A--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT------PGKGLPAIV 811
+KK++ +F+SAL G + +++ +S+ L ++ G P +
Sbjct: 789 VNYSKKKISDFLSALDGFRSAMRIVRMFKDKVDDFKSKLLKQSISLESDKEGGGRFPNLS 848
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
L +F AFD A +G IIP GV+ DYD A +K + + ++ Q++ +G ++
Sbjct: 849 FQLMYFDRAFDHNAARKNGVIIPKEGVNRDYDEALSDIKSVHREMDRYKDRQKQRMGCST 908
Query: 872 ITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I++ + GK Y LE+PES L+ VP +YEL SSKKGF RY T IK ++ L +AE +E
Sbjct: 909 ISFWSSGKTRYCLEIPESALKRHVPDEYELSSSKKGFKRYTTQEIKDMVKTLEEAEGRRE 968
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ALK ++ + F E + +W V + L +++ SL+ L + C E+
Sbjct: 969 AALKDTMRTIFHSFDESYKEWDAAVQCVSVLDVLM---SLMQYSLCGDGDMCRPEL 1021
>gi|303280413|ref|XP_003059499.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459335|gb|EEH56631.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1434
Score = 374 bits (961), Expect = e-100, Method: Compositional matrix adjust.
Identities = 263/793 (33%), Positives = 388/793 (48%), Gaps = 99/793 (12%)
Query: 0 -
Sbjct: 357 P 357
Query: 0
Sbjct: 357 357
Query: 0
Sbjct: 357 357
Query: 232 KRKSSGVK 239
++S+
Sbjct: 358 AKRSTAAA 365
Query: 240 KSKSDGNAVNADFKSPIIKPVKIFGSDKLS-------------------NGFDNPVMGDV 280
+ ++A ++P K F S
Sbjct: 366 PPPATLPPIDASSRNP--NAAKSFAERMASATATATAATTTTTDGDGDGAPNAAAAALAG 423
Query: 281 SERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLR---------NLSEG 330
+++ R+ +F +L P+ RRDA +RP + YD TL LP DF + +S G
Sbjct: 424 PAQYADRDRLQFPWLQPENRRDASGKRPNEPGYDKSTLLLPKDFPKCKDANGKPFTVSPG 483
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMN 390
Q QWW FK+ H D VI FKMGKFYELFEMDAHVGA +L L YMKGEQPHCGFPE+N++ N
Sbjct: 484 QAQWWRFKASHFDSVIMFKMGKFYELFEMDAHVGAADLGLMYMKGEQPHCGFPEKNYAAN 543
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
E+LAR G+RV++VEQTETP QL R+ ++D VV RE AV+T+GTL + E+ A+P
Sbjct: 544 AERLARAGHRVVIVEQTETPAQLAERKAAGKTRDNVVMREKVAVLTRGTLVDPEMCEASP 603
Query: 451 DASYLMALTESNQSPASQST--DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
DA+Y +A + + +R G+C D AT R +LG +DD S L L+
Sbjct: 604 DAAYCVATFDGGAVATGEGAEDERWVGVCAADCATGRFLLGAWLDDAHLSGLRTALA--- 660
Query: 509 PVEIIKPANMLSPETE-RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
+ I+ A +P+ + R+ R T D L + +
Sbjct: 661 -TDAIRDA---APDAQTRSCGRDT-------------CADDALEALRDGAYFPTL----- 698
Query: 568 NKADSNVANSQAEGDGLTC---LPGILSELISTGDSGSQV--LSALGGTLFYLKKSFLDE 622
+ A G TC LP +L+ L +T + + L A G YL + LD
Sbjct: 699 ------AGGASAPNAGATCGVKLPDVLATLATTAPARERAAGLGAFGVMHAYLSLAMLDR 752
Query: 623 TLLRFAKFELLPCSGFGDMAKKP-----YMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
L+ + E LP G GD Y+ +DA AL LEV E + G S G+L + L+
Sbjct: 753 DLIPLGRVEALP--GPGDAVAAAWSHGGYVAMDAAALSGLEVLEGA-DGGSRGSLLSSLD 809
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
C + G+R LR W+ RPL + + ERQ AV LRGV + + + PD+ER +
Sbjct: 810 RCASGPGRRTLRRWVCRPLRSHLAVEERQRAVRCLRGVASDALRSAQGRMRKAPDLERAV 869
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCEL---MDQACSSLGAILENTES 794
+RL ++ GR++ V+LYEDAAK +L F+ AL G + + + A + + +
Sbjct: 870 SRLVGAAGGRGRDAANVILYEDAAKARLNGFLRALEGMRAARDIARDFDDVRAAIADANA 929
Query: 795 RQLHHILTPGKG---------------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
L ++T G G LP + L HF+ AFDW A SGRI P G D
Sbjct: 930 PSLRALVTEGGGGDAPPDAIAAVAGAALPELTEALAHFERAFDWDGARASGRIEPKPGAD 989
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGD--TSITYVTIGKDLYLLEVPESLRGSVPRD 897
D+A ++ + +L + L + RK +G + + +V KD +L+EVP+ L VP
Sbjct: 990 AAVDAADARLAAADDALAEWLSDARKKIGGGKSEVAFVRANKDTHLVEVPDRLSSRVPAG 1049
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
++ +KGF R+ +P + + E + AE +E AL +L L+ +FCE +W++ A
Sbjct: 1050 WQREGKRKGFERFDSPELGTMRKERAAAEEAREDALGKVLSGLVLKFCEEWPRWQRAAEA 1109
Query: 958 TAGL 961
A L
Sbjct: 1110 IACL 1113
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 48/199 (24%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFS-KSNSP--SPSPTISKLNPNKSNSN--------- 48
MAP K N+ + R I+SFF+ ++N+P S +P +K P+ + S+
Sbjct: 1 MAPPKTPNDAKG-----MRSISSFFAPRTNTPKTSAAPESAKPKPDAATSDSPDENRDDR 55
Query: 49 ---PNPNPNSNSNRTPSP----------------------SPSPTTPSPLQSNPKKSRLV 83
P + + T +P + +P PS + + R
Sbjct: 56 DDEPRAAKAAKLDATTAPGAVARKETDERAEEEKDEPPLATSTPDAPSTATAAVAEKRAA 115
Query: 84 IGQT-PSPPPSTPAAAKSY-----GEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLV 137
I ++ PSPP + + G + +RI V+W +K +Y G V +FD + KH V
Sbjct: 116 IVESEPSPPSAMEMDEEEDDDVKDGRADVGRRIAVFWKKEKRFYAGKVAAFDAKRKKHRV 175
Query: 138 QYDDGEDELLDLGKEKIEW 156
YDDG+DE + + K +++W
Sbjct: 176 LYDDGDDEWIAIQKRRVKW 194
>gi|383847693|ref|XP_003699487.1| PREDICTED: probable DNA mismatch repair protein Msh6-like
[Megachile rotundata]
Length = 1125
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 249/722 (34%), Positives = 380/722 (52%), Gaps = 63/722 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K+ FL P++ RD R+ D YDP+T+Y+P DFL + +QWWE KSKH D V+FFK
Sbjct: 179 KYDFLQPNKIRDINRKPLSDPDYDPKTVYVPQDFLNQQTPAMRQWWELKSKHYDCVLFFK 238
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL+L YM+GE H GFPE + L KGY+V VEQTE
Sbjct: 239 VGKFYELYHMDAVVGVNELNLTYMRGEFAHSGFPEIGYGRFSASLIEKGYKVARVEQTEN 298
Query: 410 PEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
PE + R + + +K DKVVKREIC + T+GT T ++ ++ P+++YL++L E QS
Sbjct: 299 PEMMAQRCSKMHRPTKFDKVVKREICQISTRGTRAYTALDVEASTPNSNYLLSLIEKCQS 358
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ S +G+C +D LGQ DD S L LL+ PV ++ LS +T
Sbjct: 359 GSNTSH---YGVCFLDTTIGDFYLGQFEDDRCSSRLLTLLAHYPPVHVVYERGNLSQKTL 415
Query: 525 RAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA---- 579
+ IL +T + + L+ S+FW + TT +KN++ + K+DS + +
Sbjct: 416 K-ILDNTLAACMKEPLLRESQFWSSSTT---LKNLHE---GDYFKKSDSEFSWPEGLRPY 468
Query: 580 --EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
EGD L P EL + ALGG ++ LK FL++ LL +F+
Sbjct: 469 LNEGDSLGLTPADDKEL---------AVHALGGCIYLLKDYFLEQQLLAQGRFKSYTPPD 519
Query: 638 F---GDMAKKPY---MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
F G + M+LDA + NL +F GD G+L L+ C TAFGKRLLR W
Sbjct: 520 FLEDGSSTSSKFANNMILDAITINNLRIF-----GD--GSLMKTLDRCCTAFGKRLLREW 572
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA---NG 748
+ RP +I ERQ+A+ L ++ R L+ LPD+ERLL+++ A A N
Sbjct: 573 ICRPSCRKNVILERQEAIQELMDHSETVQ-SARSMLATLPDLERLLSKIHAQGNAARLNN 631
Query: 749 RNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--LTPG 804
+ +++E +K+++ +F + L+G E + A+ E+ + + + P
Sbjct: 632 HPDGRAIMFEGQTYSKRKILDFTTTLNGFE----EALKIVALFEDFNTALITRCTKIEPD 687
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P++ L +FK AFD EA G I+P GVD +YDS ++ +++ ++L++Q+
Sbjct: 688 GEFPSLRETLDYFKTAFDHEEAKKVGCIVPKKGVDAEYDSVLMELSDVKKDAEQYLEKQK 747
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ G +T+ K Y +E+P+S V YEL S +KG+ RY+T K+LL
Sbjct: 748 QHFG-VKVTFFGSDKKRYQIEIPDSQVKKVGSGYELTSQRKGYKRYYTAEAKELLSRQIA 806
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSS 984
AE K+ LK + +R+ QF E ++ W + A L +LD + A L + C
Sbjct: 807 AEEHKDKVLKDLNRRIFAQFSEKYDMW-----SAAVYKLSILDVLISLAEYALSGDMCVP 861
Query: 985 EM 986
E+
Sbjct: 862 EI 863
>gi|256078665|ref|XP_002575615.1| hypothetical protein [Schistosoma mansoni]
gi|360043417|emb|CCD78830.1| hypothetical protein Smp_042670.2 [Schistosoma mansoni]
Length = 1116
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/728 (32%), Positives = 371/728 (50%), Gaps = 40/728 (5%)
Query: 272 FDNPVMGDVSERFSAREADKFH----FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRN 326
+ V+ V+E F H FL P + +D RRP YD TLY+P +F
Sbjct: 68 LETSVVAQVNEAFEDESVSWTHLSLPFLEPSKIKDINGRRPDHPEYDSHTLYVPEEFKTK 127
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERN 386
+ G +QWWE KS++ D ++FFK+GKFYE++ MDA +G KEL L +MKG HCGFPE
Sbjct: 128 QTPGMRQWWELKSRYTDVILFFKVGKFYEMYHMDAMIGVKELGLVFMKGSFAHCGFPEVA 187
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG--E 444
F ++L RKGY+V +EQTE+ + + R K K S +KVV+RE+C ++T GT T +
Sbjct: 188 FPRMADQLVRKGYKVARIEQTESIDAMNERCKRKSSSEKVVRREVCQIITPGTCTASTRD 247
Query: 445 LLS-ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L++ A+PD S+L+A+ ES+ +S FGI +++ +T +I +GQ +DD CS L
Sbjct: 248 LINLAHPD-SFLLAVVESH---GDKSYPFAFGIGLLNASTGKINIGQFLDDRHCSRLRTF 303
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS P +++ + I L P +FW A+ TV E++
Sbjct: 304 LSHYPPNQLLIERGTAGSAIKSLIKTSLSCVPTEFLTPTKQFWSAKNTVQELETADYFPK 363
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS-GSQVLS-------ALGGTLFYL 615
S DSN + + P +L ++S D G V S LG ++YL
Sbjct: 364 QTSNTTVDSNHVSKVSSFPDKENWPDVLLNMLSEDDPLGRTVKSEWELAFRCLGALIYYL 423
Query: 616 KKSFLDETLLRFAKFELL-------------PCSGFGDMAKKPYMVLDAPALENLEVFEN 662
+ +D +L ++ P S + MVLD L NL++ N
Sbjct: 424 RYCLIDREVLSLGFIDVYVPIDMKNANSQRSPGSIELFYDTQSQMVLDNITLSNLDIIRN 483
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
+ G G+L +LN C T FG+RLLR W+ P N +IR+RQ A+ L ++ +
Sbjct: 484 NVDGSQEGSLLQRLNTCCTFFGRRLLRQWITAPPCNPNVIRQRQLAIENLISISDIIP-K 542
Query: 723 FRKALSRLPDMERLLARLFASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELM 778
R+ L++LPD+ERL+ ++ +N ++ +++E+ ++K + +F++ L G EL
Sbjct: 543 LREKLAQLPDLERLITKIHLLGSKGDKNHPDSRAIIFEEVQYSRKNIIDFVATLDGFELS 602
Query: 779 DQACSSLGAI-LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
+ + L + ++L + G P I + +FK+AFD +A GRI P G
Sbjct: 603 YKIIHEINHYPLSSAYLKKLVTLTNLGGNFPDITEKINYFKNAFDAEKAKREGRITPEPG 662
Query: 838 VDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
+D +YD + ++K I + + L + K G T + Y G++ Y +E+PESL VP
Sbjct: 663 IDPEYDESLSEIKRIVEDMDRFLLKWSKTFG-TRLAYWGTGRNRYQIEIPESLASRVPNS 721
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
++L S +KG RY ++ L EL+ AE K+++L+SI+Q + F E W ++
Sbjct: 722 WQLSSQRKGVKRYTCSETQEWLSELTAAEERKDASLRSIMQHIFSSFSESFTHWHMAMSC 781
Query: 958 TAGLTLIL 965
A L I+
Sbjct: 782 LAELDCII 789
>gi|256078667|ref|XP_002575616.1| hypothetical protein [Schistosoma mansoni]
gi|360043418|emb|CCD78831.1| hypothetical protein Smp_042670.1 [Schistosoma mansoni]
Length = 1074
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 233/728 (32%), Positives = 371/728 (50%), Gaps = 40/728 (5%)
Query: 272 FDNPVMGDVSERFSAREADKFH----FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRN 326
+ V+ V+E F H FL P + +D RRP YD TLY+P +F
Sbjct: 68 LETSVVAQVNEAFEDESVSWTHLSLPFLEPSKIKDINGRRPDHPEYDSHTLYVPEEFKTK 127
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERN 386
+ G +QWWE KS++ D ++FFK+GKFYE++ MDA +G KEL L +MKG HCGFPE
Sbjct: 128 QTPGMRQWWELKSRYTDVILFFKVGKFYEMYHMDAMIGVKELGLVFMKGSFAHCGFPEVA 187
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG--E 444
F ++L RKGY+V +EQTE+ + + R K K S +KVV+RE+C ++T GT T +
Sbjct: 188 FPRMADQLVRKGYKVARIEQTESIDAMNERCKRKSSSEKVVRREVCQIITPGTCTASTRD 247
Query: 445 LLS-ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L++ A+PD S+L+A+ ES+ +S FGI +++ +T +I +GQ +DD CS L
Sbjct: 248 LINLAHPD-SFLLAVVESH---GDKSYPFAFGIGLLNASTGKINIGQFLDDRHCSRLRTF 303
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS P +++ + I L P +FW A+ TV E++
Sbjct: 304 LSHYPPNQLLIERGTAGSAIKSLIKTSLSCVPTEFLTPTKQFWSAKNTVQELETADYFPK 363
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS-GSQVLS-------ALGGTLFYL 615
S DSN + + P +L ++S D G V S LG ++YL
Sbjct: 364 QTSNTTVDSNHVSKVSSFPDKENWPDVLLNMLSEDDPLGRTVKSEWELAFRCLGALIYYL 423
Query: 616 KKSFLDETLLRFAKFELL-------------PCSGFGDMAKKPYMVLDAPALENLEVFEN 662
+ +D +L ++ P S + MVLD L NL++ N
Sbjct: 424 RYCLIDREVLSLGFIDVYVPIDMKNANSQRSPGSIELFYDTQSQMVLDNITLSNLDIIRN 483
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
+ G G+L +LN C T FG+RLLR W+ P N +IR+RQ A+ L ++ +
Sbjct: 484 NVDGSQEGSLLQRLNTCCTFFGRRLLRQWITAPPCNPNVIRQRQLAIENLISISDIIP-K 542
Query: 723 FRKALSRLPDMERLLARLFASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHGCELM 778
R+ L++LPD+ERL+ ++ +N ++ +++E+ ++K + +F++ L G EL
Sbjct: 543 LREKLAQLPDLERLITKIHLLGSKGDKNHPDSRAIIFEEVQYSRKNIIDFVATLDGFELS 602
Query: 779 DQACSSLGAI-LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
+ + L + ++L + G P I + +FK+AFD +A GRI P G
Sbjct: 603 YKIIHEINHYPLSSAYLKKLVTLTNLGGNFPDITEKINYFKNAFDAEKAKREGRITPEPG 662
Query: 838 VDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
+D +YD + ++K I + + L + K G T + Y G++ Y +E+PESL VP
Sbjct: 663 IDPEYDESLSEIKRIVEDMDRFLLKWSKTFG-TRLAYWGTGRNRYQIEIPESLASRVPNS 721
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
++L S +KG RY ++ L EL+ AE K+++L+SI+Q + F E W ++
Sbjct: 722 WQLSSQRKGVKRYTCSETQEWLSELTAAEERKDASLRSIMQHIFSSFSESFTHWHMAMSC 781
Query: 958 TAGLTLIL 965
A L I+
Sbjct: 782 LAELDCII 789
>gi|198435135|ref|XP_002126574.1| PREDICTED: similar to MGC85188 protein [Ciona intestinalis]
Length = 1307
Score = 368 bits (944), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 234/700 (33%), Positives = 366/700 (52%), Gaps = 43/700 (6%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
FL P + +D + R+P D YD +L +P DF+ L+ QWW+ KS + + V+FFK+GK
Sbjct: 325 FLHPSKIKDTQGRKPDDPLYDKSSLKIPNDFMTKLTPAMHQWWKLKSTNFNVVLFFKVGK 384
Query: 353 FYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
FYEL+ MDA VG KEL L YMKG H GFPE F + L +KGY V VEQTETPEQ
Sbjct: 385 FYELYHMDAVVGVKELGLTYMKGNFAHSGFPEVAFGRYADTLVQKGYTVARVEQTETPEQ 444
Query: 413 LELRRKEKG--SKDKVVKREICAVVTKGTLTEG--ELLSANPDASYLMALTES--NQSPA 466
+ R + K +K ++REIC V TKGT + S + ++ +L++++E N++ +
Sbjct: 445 NQQRIRGKSLPKHEKTLRREICRVTTKGTQVHNMWQGGSKHHESDFLLSISERVVNRNES 504
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
S S R FG+C VD LGQ DD CS LC +L+ P +++ LS E +
Sbjct: 505 SGSVCREFGVCFVDTTVGVFHLGQFTDDRHCSRLCTMLAHHSPSQVLFERGKLSNELNKI 564
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ + L N LVP S+FWDA T+ + N E+ N + ++ D L
Sbjct: 565 LRTGLSSILQNPLVPGSQFWDAPKTLKTLLN-EKYFVKENDNVWPPTLKCMLSDTDALGL 623
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS---------- 636
P + EL LSALG ++YLKK +D +L +F + +
Sbjct: 624 SPKLGYEL---------ALSALGACVYYLKKCLIDYEILSMRQFHIYNATVEKTADVKVK 674
Query: 637 -GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
F +K M+LD+ L NLE+ NS+ G+ GTL +L++C T FGKRLL+ WL P
Sbjct: 675 DNFATGNEK--MILDSVTLSNLEIIYNSK-GEREGTLLERLDNCRTPFGKRLLKQWLCLP 731
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN---SN 752
N +I +R DAV + N + F ++ ++PD+ER+L+ + + S+ + N
Sbjct: 732 PCNPDVINDRLDAVDDIMSNNDLLSPLF-SSMRKMPDLERMLSNIHSLSKGARKEDHPEN 790
Query: 753 KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL--- 807
+ + YE+ +KK++++FIS L E + + + + +S L +L G+
Sbjct: 791 RAIFYEETKYSKKKIEDFISVLDNYEAAFVSIKKMQGSVASFKSSLLKSVLGLTSGISEG 850
Query: 808 --PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
P + S LK +K+AF+ +A +G+I P+ G + +YD A + + I L ++L EQ+K
Sbjct: 851 KFPDLGSTLKQWKNAFNQKKAKETGKITPNAGTNPEYDGAMEDINRINDDLERYLNEQKK 910
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
L + I Y G Y LE+P + +P DY + +KGF + TP + LL E+
Sbjct: 911 KLSCSRIIYKGTGNKRYQLELPADVASRKLPNDYVISGQRKGFKSFRTPKVDCLLKEMED 970
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
AE+ +++A + + +F + W V+ A L ++
Sbjct: 971 AETRRDTAQADTMSIVFREFDKDFEMWNTAVSCLALLDVL 1010
>gi|391335569|ref|XP_003742162.1| PREDICTED: DNA mismatch repair protein Msh6-like [Metaseiulus
occidentalis]
Length = 1146
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 241/685 (35%), Positives = 367/685 (53%), Gaps = 59/685 (8%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D ++ GD YDP TL++P F +L+ G +QWWE KS+H D V+FFK+GKFYEL+ M
Sbjct: 236 KDLSGKKIGDADYDPSTLHVPNSFKNSLTPGVRQWWELKSRHFDTVLFFKVGKFYELYHM 295
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
DA +G + L L YMKG+ H GFPE N+E L +KGY+ VEQTETP +E R K
Sbjct: 296 DAVIGVENLGLTYMKGDWAHSGFPEVALQRNMEALIQKGYKCARVEQTETPSMMEQRCKT 355
Query: 420 KGSK---DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
G DKVV+REIC V +KG G A P +SY +AL S +R FG+
Sbjct: 356 SGKSSKFDKVVRREICNVSSKGLQLCGA--DAVPGSSYCLALF---------SKERRFGV 404
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER---AILRHTRN 533
C+VD R +G+ DD S L L+S PVE I + +S + +R AI
Sbjct: 405 CLVDSTVGRFHIGEFEDDHQLSSLRTLISRFAPVEAILERS-ISADVKRIVEAIGAIIDQ 463
Query: 534 PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
P N +F AE + I+ + D N + L G+++E
Sbjct: 464 PAKN------KFLSAEKALTLIR------------EGDYFKGNEYPQA-----LKGLIAE 500
Query: 594 ---LISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFAKFELLPC---SGFGDMAKKPY 646
L+ST +G ++ ++AL + L+++ + E +L +FE + G GD K
Sbjct: 501 NDPLMSTPRAGCELAVAALASIVGRLQEALILEDVLTMVEFETIEFKFEGGKGDYLPK-I 559
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M++D+ AL NLE+FENS G S G+L + +N C TAFG R L+ WL P S I R
Sbjct: 560 MIMDSVALTNLEIFENS-VGTSEGSLISTINFCSTAFGLRHLKKWLLGPSCVSEEIESRW 618
Query: 707 DAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFA-SSEANGRNSNKVVLYED--AA 761
DAV L + F+L ++ L +LPDM+++LAR+ + S + ++ +LY D +
Sbjct: 619 DAVGELM---ENFSLLKTLQERLKKLPDMDKMLARIHSLSLKKTDHPDSRAILYSDDVYS 675
Query: 762 KKQLQEFISALHGCELMDQACSSL-GAILENTESRQLHHILTPGKGLPAIVSILKHFKDA 820
K+++++F + L G C + L+++ R L H+ T G P + L +F A
Sbjct: 676 KRKIEDFCNVLDGFREAQAICKLVRDKDLKSSLLRDLTHLTTEGGHFPDVKEALNYFDKA 735
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A G+I+P GVD ++D A ++V E++ SL +HL++Q K G + I+Y G+
Sbjct: 736 FDKTKALKDGKIVPAPGVDEEFDEAQRRVAEVKDSLDEHLQQQMKHFGTSKISYTGTGRT 795
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
Y +EVPES+ G D+ L KKGF RY+T K L E+ +AE +++ K +++R+
Sbjct: 796 AYQIEVPESVAGKATEDHTLEGHKKGFKRYYTRRGKSLCDEMIKAEEMRDAVSKDLMRRI 855
Query: 941 IGQFCEHHNKWRQMVAATAGLTLIL 965
F E W++++ + L ++
Sbjct: 856 FHAFDEKRPLWKKVIECLSNLDCLM 880
>gi|242011381|ref|XP_002426429.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510534|gb|EEB13691.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1265
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 248/705 (35%), Positives = 362/705 (51%), Gaps = 52/705 (7%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF FL P+ D K+RRP YD +TLY+P DF + +QWWE KS H D ++FFK
Sbjct: 296 KFSFLQPENIMDKKKRRPDHPDYDKKTLYVPEDFKAKATPAVRQWWELKSDHYDCILFFK 355
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L +MKG+ H GFPE ++ L +KGY+V VEQTET
Sbjct: 356 VGKFYELYHMDAVIGVNELSLTFMKGDFAHSGFPEISYGRFSTILVQKGYKVARVEQTET 415
Query: 410 PEQLELRRKEKGSK---DKVVKREICAVVTKGT----LTEGELLSANPDASYLMALTESN 462
PE + R K + DKVV REIC V TKGT +GE + + +YL AL E
Sbjct: 416 PEMMTERCKHQSKVTKFDKVVNREICQVTTKGTQIFSFIDGE--AKEYETNYLFALAEKT 473
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ S + FG+C +D + LGQ DD S L +LS PV+I+ LS +
Sbjct: 474 DN----SGNIAFGVCFIDTSIGTFHLGQFNDDKFLSRLRIVLSHHPPVQILYEKYQLSGK 529
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVANSQAE 580
T + + + L L +EFW A T+ L +N + + E+ K +
Sbjct: 530 TMQLLKCAFNSVLQEPLAAETEFWSASKTLSTLAEENHFTK-PNENGTKWPDAIKKFLNP 588
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL-PCSGFG 639
D L +S + G + ALG ++YLK+ FLD+ LL KFE+ P +
Sbjct: 589 ADSLG---------LSPSEDGELAIKALGACVWYLKQCFLDQQLLAMQKFEIYTPINKIS 639
Query: 640 DMAKKP----------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
++ + YM+LD+ LENLEV NS +G+ GTL +L+HC T GKRLLR
Sbjct: 640 EVNFETNMATSVDLGRYMILDSLTLENLEVINNS-NGEKHGTLLEKLDHCCTFTGKRLLR 698
Query: 690 TWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
W+ PL + I RQ A+ L +GV + + + L +PD+ERLL ++ A
Sbjct: 699 QWICTPLCSISGITSRQKAIIELSEKGVIK----KIKSMLKGVPDLERLLGKIHTQGNAI 754
Query: 748 GRNSN---KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILE-NTESRQLHHIL 801
++ + + +ED +K+++ +F+SAL G E + +L E ++E + +
Sbjct: 755 RSKTHPDSRAIFFEDKLYSKRKILDFLSALTGFEKVQNLIETLQNEFEWDSELLRQCLLF 814
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIP-HGGVDMDYDSACKKVKEIEASLTKHL 860
+P + L FK+AFD A G IIP GVD +YDS K++K IE K+L
Sbjct: 815 SPNGKFKDLSEDLNFFKNAFDHDLAKKEGCIIPVSSGVDSEYDSVVKEIKSIEIESNKYL 874
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
K Q + TS+ Y K+ + LEVP+S +YE S +KG+ R+ TP K L
Sbjct: 875 KSQCQFF-QTSVKYYGTEKNRFQLEVPDSQAKKANENYEFTSCRKGYKRFTTPETKSFLQ 933
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L QAE K + LK + +R+ QF + + W + + L ++
Sbjct: 934 RLKQAEDMKSNILKDLRRRIFAQFSDKYENWITAIQCVSLLDALM 978
>gi|332024253|gb|EGI64457.1| Putative DNA mismatch repair protein Msh6 [Acromyrmex echinatior]
Length = 1122
Score = 366 bits (939), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 258/758 (34%), Positives = 376/758 (49%), Gaps = 59/758 (7%)
Query: 231 RKRKSSGVKKSKSDGNAVNA-----DFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFS 285
+KRK+S VK N+ N D K P +PV+ S +SNG +
Sbjct: 123 KKRKTSSVKFKSKQANSRNTKANKKDLKQPS-QPVQ---SQIISNGLNTA---------H 169
Query: 286 AREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
K FL P++ RD RR P D YD +TLY+P +FL N + +QWWE KSKH D
Sbjct: 170 TWPHLKLDFLRPEKIRDIHRRMPNDPDYDSKTLYVPTEFLINQTPAMRQWWELKSKHFDC 229
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVV 404
V FFK+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V V
Sbjct: 230 VFFFKIGKFYELYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARV 289
Query: 405 EQTETPEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALT 459
EQTE PE + R + K +K DKVVKREIC V T+GT T ++ ++ P+++YL++L
Sbjct: 290 EQTENPEMMAARCSKMTKPTKFDKVVKREICQVSTRGTRVYTPLDVEASTPNSNYLLSLV 349
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E ST FG+C +D LGQ +DD S L LL+ P+ +I + L
Sbjct: 350 EKCN---FNSTISSFGVCFIDTTIGEFYLGQFVDDRCNSRLLTLLAHHPPIHVIYERSNL 406
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQ 578
S +T + I L L ++FW A T + ++ + Y + +S +
Sbjct: 407 SQKTLQLINNTLPAVLKEPLQREAQFWSATTVLKKLHEGSYFKKEKDSSFAWPEGLKPYL 466
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
EGD L P D+ + ALGG + LK+ L++ LL F F
Sbjct: 467 NEGDSLGLTP---------ADNKELAVHALGGCVCLLKEFLLEQQLLAQGCFNTYIPPDF 517
Query: 639 GDMAKKP------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ MV+DA ++NL +F G+L L+HC TAFGKRLLR W+
Sbjct: 518 STANSRTGLNYANNMVIDAVTIKNLRLF-------GEGSLINILDHCCTAFGKRLLREWV 570
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
RP +I ERQ+AV L R LS LPD+ERLL+++ A A ++
Sbjct: 571 CRPSCRKTVIIERQEAVQELLD-RMDVMQSARIILSTLPDLERLLSKIHAQGNAAKMKNH 629
Query: 753 ---KVVLYE--DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL 807
+ +++E +K+ + +F + L E + + N +R + P
Sbjct: 630 PEGRAIMFEGPTYSKRVIVDFTTTLAKFEEVLKFIELFDDFKSNLITRYTQY--EPNGDF 687
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + L +FK AFD EA G I+P GVD +YDS ++ +I+ L K+L++Q++
Sbjct: 688 PRLRETLDYFKTAFDHEEAKKQGYIVPKKGVDAEYDSVLTELADIKKDLDKYLEKQKQHF 747
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
G IT+ + Y +E+PES V YEL+S +KGF RY+T K+LL AE
Sbjct: 748 G-VKITFHGTDRKRYQIEIPESQVKKVGPGYELQSQRKGFKRYYTAEAKELLTRQMNAEE 806
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
K+ LK + +R+ QF E ++ W V A + +++
Sbjct: 807 HKDKVLKDLNRRIFAQFSEKYDMWHAAVYKLATMDVLI 844
>gi|156549300|ref|XP_001600292.1| PREDICTED: probable DNA mismatch repair protein Msh6 [Nasonia
vitripennis]
Length = 1151
Score = 365 bits (938), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 271/824 (32%), Positives = 403/824 (48%), Gaps = 85/824 (10%)
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKED----VSEDEEVDLVDEQENKVL 228
+++++ +D E+ DE D S S++D + +V E SEDE+ +Q+ +
Sbjct: 95 RRIIIPEDNS-EDSGDEYKPDESAESEEDLDLSVVSESEPNTASEDEDETPKKKQKMSNI 153
Query: 229 RGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSARE 288
+ R+ G KKS + ++ + P + K S+ D P +
Sbjct: 154 KTPSRRGGGAKKSIAKKDSGTGQ-EQP---------TGKASDTQDWPHL----------- 192
Query: 289 ADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIF 347
K+ FL D+ RD K+RR D YDPRT+Y+PPDFL + +QWW KS H D V+F
Sbjct: 193 --KYEFLQKDKIRDNKKRRSTDPDYDPRTVYVPPDFLDKQTPAMRQWWVLKSDHYDCVLF 250
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
FK+GKFYEL+ MDA G EL L +M+GE H GFPE + L +GY+V +EQT
Sbjct: 251 FKVGKFYELYHMDAVTGVNELSLTFMRGEFAHSGFPEIAYGRFSASLIERGYKVARIEQT 310
Query: 408 ETPEQLELRRKEKGSK---DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESN 462
E PE + R + G DKVVKREIC + TKGT T + ++ P ++YL+++ E
Sbjct: 311 ENPEMMSQRCAKMGKTTKFDKVVKREICQISTKGTRVYTAQDAEASAPTSTYLLSIIEKQ 370
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ + S+ +G+C +D LGQ DD S L LL+ P +I N LS
Sbjct: 371 ERNQNISS---YGVCFIDTTIGDFNLGQFQDDRCNSRLLTLLAHYPPAHVIYERNNLSQT 427
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
T + + + L +FW + T VL + L++AD + E D
Sbjct: 428 TLKILNNLLPGAMKEALQKEVQFW-SSTKVLNV-----------LHEADY----FKNEED 471
Query: 583 GLTCLPGILSELISTGDS--------GSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
P L ++ GDS ++ALGG ++ LK LD LL +F+
Sbjct: 472 SSFSWPKGLEPYLNDGDSLGLTPLEEKQLAVNALGGCVYLLKNYQLDHQLLAQGRFKTYV 531
Query: 635 CSGF------GDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F D K Y MVLDA + NL V N G+L L++C TAFGKRL
Sbjct: 532 PPDFSVNAEKSDGTKLAYNMVLDAMTITNLRVLGN------EGSLIKTLDNCCTAFGKRL 585
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEA 746
LR W+ RP +I ERQ+A+ L ++ P + E R LS LPD+ERLL+++ A
Sbjct: 586 LREWVCRPSCRKSVIVERQNAITEL--IDNPDVVQEVRSKLSGLPDLERLLSKIHVQGNA 643
Query: 747 NG-RN--SNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN + +++E A KK + +FI+AL+G E + + ++ L
Sbjct: 644 AKLRNHPDGRAIMFEGPAYSKKTIVDFITALNGFEDILKLIKKFSKFTNPLINKCTQ--L 701
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
P P + L HFK AF+ EA G I+P GVD +YD+ ++ +I+ L +L+
Sbjct: 702 EPEGDFPELRETLDHFKTAFNHEEAKKEGFIVPKHGVDREYDAVLMELADIKKELDSYLE 761
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+QRK G I + K + +EVPES V YEL+ S+KGF RY+T K LL
Sbjct: 762 KQRKHFG-VQIKFCGNDKKRFQIEVPESQIKKVGSGYELQGSRKGFKRYYTEESKDLLAR 820
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
AE +K+ LK +++ +F + ++KW A L ++
Sbjct: 821 QIAAEEQKDKVLKDSNRKIFAKFSDQYDKWSNATYNIAVLDCLI 864
>gi|328779790|ref|XP_392346.4| PREDICTED: probable DNA mismatch repair protein Msh6 [Apis
mellifera]
Length = 1129
Score = 365 bits (937), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 241/709 (33%), Positives = 374/709 (52%), Gaps = 75/709 (10%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K+ FL P++ RD ++ P D YDP+TLY+P DFL + +QWWE KSKH D V+FFK
Sbjct: 184 KYDFLQPNKIRDINKKSPNDSDYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVLFFK 243
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 244 LGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTEN 303
Query: 410 PEQLELRRKE--KGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
P+ + R + +K DKVVKREIC + +KGT T ++ + P+++YL+++ E S
Sbjct: 304 PDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEKCPS 363
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ S +G+C +D LGQ DD S L LL+ PV ++ LS +T
Sbjct: 364 GSNISH---YGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQKTL 420
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS------NVANSQ 578
+ + + L+ S+FW + TT +KN++ + K+DS + +
Sbjct: 421 QIFNNNLAACIKESLLRESQFWSSSTT---LKNLHE---GDYFKKSDSEFQWPTGLQSYL 474
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSG 637
+ D L P EL + ALGG ++ LK+ L++ LL +F+ +P
Sbjct: 475 NKSDSLGLTPAEDKEL---------AVHALGGCIYLLKEYLLEQQLLAQGRFKTYIP--- 522
Query: 638 FGDMAKKPY--------MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
D + K + MVLDA + NL +F G+L L+ C TAFGKRLLR
Sbjct: 523 -PDFSNKTFEASKFANNMVLDAITINNLRIF-------GEGSLIKTLDRCCTAFGKRLLR 574
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANG 748
W+ RP +I ERQ+A+ L +N A++ R L+ LPD+ERLL+++ A
Sbjct: 575 EWICRPSCRKDVIIERQEAIQEL--MNHSEAVQTTRSILAGLPDLERLLSKIHAQGNPAK 632
Query: 749 RNSN---KVVLYEDA--AKKQLQEFISALHGCE-------LMDQACSSLGAILENTESRQ 796
+N++ + +++E +KK++ +FI+ L+G E L + CS+L + E
Sbjct: 633 QNNHPDGRAIMFEGQTYSKKRITDFITTLNGFEDVLKIIALFEDFCSTLISKCCKVE--- 689
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
P P++ L +FK AFD EA G I+P GVD +YDS +++EI+
Sbjct: 690 ------PDGEFPSLRESLDYFKTAFDHEEAKKVGCIVPKKGVDSEYDSVLMELEEIKKDS 743
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
++L++Q+K G IT+ K Y +E+P+S V +EL+S +KG+ RY+T K
Sbjct: 744 EQYLEKQKKHFG-VKITFHGSDKKRYQIEIPDSQTKKVGAGFELQSQRKGYKRYYTAESK 802
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+LL AE ++ LK + +R+ QF E ++ W V + L +++
Sbjct: 803 ELLSRQINAEEHRDKVLKDLNRRIFAQFSEKYDMWSMAVYKLSVLDVLI 851
>gi|307206242|gb|EFN84313.1| Probable DNA mismatch repair protein Msh6 [Harpegnathos saltator]
Length = 1135
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 241/701 (34%), Positives = 357/701 (50%), Gaps = 58/701 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ +D KRR P D YD +T+Y+P DFL N + +QWWE KSKH D V+FFK
Sbjct: 180 KLDFLQPEKIKDIKRRTPIDCDYDSKTVYVPHDFLLNQTPAMRQWWELKSKHFDCVLFFK 239
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 240 VGKFYELYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTEN 299
Query: 410 PEQLELRRKEKGSK----DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQ 463
PE + R + K DKVVKREIC V T+GT T ++ ++ P+++YL+AL E
Sbjct: 300 PEMMTARCNKMSGKPTKFDKVVKREICQVSTRGTRVYTPLDVEASTPNSNYLLALVEKCN 359
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
++ S FG+C +D LGQ DD S L +L+ PV II LSP+T
Sbjct: 360 FDSTSS----FGVCFIDTTIGEFHLGQFDDDRCNSRLLTMLAHHPPVHIIHERGNLSPKT 415
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA---- 579
+ I L L ++FW A T +K ++ + N DS+ A +
Sbjct: 416 LQIINSTLPAALKEPLQREAQFWSATTA---LKKLHEEDYFKKEN--DSSFAWPEGLKPY 470
Query: 580 --EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
EGD L P D+ + ALGG ++ LK+ L++ LL F
Sbjct: 471 LNEGDSLGLTP---------ADNKELAVHALGGCVYLLKEYLLEQRLLAQGCFNTYCPPD 521
Query: 638 FGDMAKKP------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
F + + MV+DA ++NL +F G+L + L+ C TAFGKRLLR W
Sbjct: 522 FSAASNRVGLNYANTMVIDAVTIKNLRIF-------GEGSLNSVLDRCCTAFGKRLLREW 574
Query: 692 LARPLYNSGLIRERQDAVAGLR---GVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ RP +I ERQ AV L V Q R L+ LPD+ERLL+++ A
Sbjct: 575 ICRPSCRKAIILERQQAVEELVDRIDVTQ----SARAILATLPDLERLLSKIHAQGNPRM 630
Query: 749 RNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+N + +++E + +K+ + +F + L E + + N +R + P
Sbjct: 631 KNHPDGRAIMFEGSTYSKRVIIDFTTTLAKFEDVLKFIELFDDFKSNLITRCTQY--EPD 688
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L +FK AFD EA G I+P GVD +YDS ++ + A L ++L++Q+
Sbjct: 689 GEFPRLRETLDYFKTAFDHEEAKKQGCIVPKKGVDAEYDSVLTELAQNRADLDQYLQKQK 748
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ G +T+ + Y +EVPE+ V YEL+S +KGF RY+T ++LL
Sbjct: 749 QHFG-VKVTFHGTDRKRYQIEVPETQVKKVGPGYELQSQRKGFKRYYTAEARELLARQMN 807
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
AE ++ LK + +R+ QF E+++ W V A + +++
Sbjct: 808 AEEHRDKVLKDLNRRIFAQFSENYDTWHMAVYKLATMDVLI 848
>gi|350419676|ref|XP_003492265.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
impatiens]
Length = 1129
Score = 364 bits (934), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 267/845 (31%), Positives = 426/845 (50%), Gaps = 90/845 (10%)
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQ--ENKV-LR 229
+++++ D+E E+ DE D D S+D + E VS+ E +E+ E K+ L
Sbjct: 84 RRLIIPDEESGEDSGDEFKPDPEDESEDS---DSVSEGVSKSEPPTASEEESPEKKIKLA 140
Query: 230 GRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA 289
R+ + K N +A +S + + GSD ++ + P +
Sbjct: 141 KAPRRKPEISTMK---NTKDAKKESKPQQQNQTKGSDSVTESW--PHL------------ 183
Query: 290 DKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
K+ FL P++ RD +R+ P D YDP+TLY+PPDFL + +QWWE KSKH D V+FF
Sbjct: 184 -KYDFLQPNKIRDIRRKPPSDPDYDPKTLYVPPDFLNQQTPAMRQWWELKSKHFDCVLFF 242
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
K+GKFYEL+ MDA + E++L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 243 KVGKFYELYHMDAVISVNEINLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTE 302
Query: 409 TPEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQ 463
P+ + R + + +K DKVVKREIC + +KGT T ++ ++ +++YL++L E +
Sbjct: 303 NPDMMAQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASTANSNYLLSLIE--K 360
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
P+ +T +G+C +D LGQ DD S + LL+ PV ++ LS +T
Sbjct: 361 CPSGSNTSH-YGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKT 419
Query: 524 ERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA------- 575
+ IL +T + + L+ S+FW + TT +KN++ E +D+
Sbjct: 420 LK-ILNNTLAACIKEPLLRESQFWSSSTT---LKNLHE---GEYFKSSDTQFQWPAGLQP 472
Query: 576 -NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+Q + GLT + D + ALGG ++ LK+ L++ LL +F+
Sbjct: 473 YLNQNDTLGLT-----------SADDKELAVHALGGCVYLLKEYLLEQQLLAQGRFKTYT 521
Query: 635 CSGFGDMAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + MVLDA + NL +F G+L L+ C TAFGKRLLR
Sbjct: 522 PPDFSNEKSVASNFANNMVLDAITINNLRIF-------GEGSLMKTLDRCCTAFGKRLLR 574
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
W+ RP +I ERQ A+ L N R L+ LPD+ERLL+++ A A
Sbjct: 575 EWICRPSCRKNIIIERQQAIQELMD-NTEVMQNARSILAGLPDLERLLSKIHAQGNAAKM 633
Query: 750 NSN---KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--LT 802
N++ + +++E +KK++ +FI L E + A+ E+ +S + +
Sbjct: 634 NNHPDGRAIMFEGQTYSKKKIADFIVTLSAFE----DVLKIVALFEDFKSTIVSRCTKIE 689
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P++ L +FK AFD EA G I+P GVD +YDS ++ +++A ++L++
Sbjct: 690 PDGEFPSLRESLDYFKTAFDHEEAKKVGCIVPKRGVDSEYDSVLIELDDVKADAQEYLEK 749
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
Q+K G +T+ K Y +E+P+S + YEL+S +KG+ RY+T K+LL
Sbjct: 750 QKKHFG-VKVTFHGSDKKRYQIEIPDSQIKKIGAGYELQSQRKGYKRYYTAETKELLSRQ 808
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
AE ++ LK + +R+ +F E ++ W V L +LD + A L + C
Sbjct: 809 INAEEHRDKVLKDLNRRIFAKFSEKYDMWNMAV-----YKLSVLDVLISLAEYALSGDMC 863
Query: 983 SSEMN 987
E+N
Sbjct: 864 IPEVN 868
>gi|324501049|gb|ADY40473.1| DNA mismatch repair protein Msh6 [Ascaris suum]
Length = 1219
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 378/719 (52%), Gaps = 66/719 (9%)
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
F FL PD+ RDA R D Y PRTL++P FL+ + G +QWW KS + D ++ FK+
Sbjct: 226 FDFLQPDKIRDANGRLASDPDYCPRTLFVPEAFLKQQTPGHRQWWLAKSAYFDTMLLFKV 285
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYE++ MDA +G + L+L YM+G+ HCGFPE + ++L +GY+V VEQTETP
Sbjct: 286 GKFYEMYHMDAVIGVENLNLTYMRGKIAHCGFPEVAYGRFADQLVNRGYKVARVEQTETP 345
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN---------PDASYLMALTES 461
QLE R K + +++KVV+REIC V + GT T G L + + P A +L A E
Sbjct: 346 AQLEERNKLEKNREKVVRREICRVTSAGTRTYGVLDTCDGESALDAVEPTARHLFAFAEK 405
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
P T +G+C +D + R + Q DD + S + L + +P +I+ +SP
Sbjct: 406 VM-PNGLPT---YGVCFIDTSVGRFYVAQFTDDANRSSMRTLFAHYQPSQILYERGRISP 461
Query: 522 ETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRIT-AESLNKADSNVANSQA 579
++ ++L + + ++ + L+P EF DAE T IK + N++ E + + N A
Sbjct: 462 ASQ-SLLNSSASAVIKEALIPKKEFPDAEGT---IKMLTNKLYFGEVVQSWPDTLRNLLA 517
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSGF 638
+ D L P SE ++ ++ALG L+YLK+S +D ++ FE +P S
Sbjct: 518 DADALN--PKCASEF-------NECMAALGAVLWYLKRSLIDVDMVTMRNFERYIPPSLS 568
Query: 639 GD--------MAKKPY-----MVLDAPALENLEV------FENSRSGDSSG---TLYAQL 676
G+ ++ + Y MVLD +L NL + + S DS+ +LY +
Sbjct: 569 GNRMSQRDSVVSDETYWRGRRMVLDGISLYNLNIVPPLDGVKRSALRDSTSSKYSLYNTI 628
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL-RGVNQPFALEFRKALSRLPDMER 735
N C+T FGKR+LR W+ P ++ ++R RQDA+ L ++ FA + + L ++PD+ER
Sbjct: 629 NKCITPFGKRMLRQWVCAPSCDADVLRSRQDAIQWLMNSSSKIFADKATELLRKMPDLER 688
Query: 736 LLARLF-------ASSEANGRNSNKVVLYE--DAAKKQLQEFISALHGCELMDQACSSLG 786
L+ ++ AS +GR V++E ++++ + +SAL G E +D+
Sbjct: 689 LVQKIHTLGLKYRASEHPDGR----AVMFEPLRYNRRKIGDLLSALSGFERVDELAQFYR 744
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ E G P I + L HFKDAFD +A G I+P G+D +YD
Sbjct: 745 EMFVGDEECPQLMDRCFGASFPDISNDLHHFKDAFDHDKAKQEGIIVPEKGIDAEYDGVM 804
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ ++E L +L + RK LG I Y+ G+ Y LE+PE++ ++ D+EL+SS+KG
Sbjct: 805 EDIRERMRDLEAYLHKIRKQLGCERIQYMGSGRSRYQLEIPEAIAQNLSADFELKSSRKG 864
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ R T +L EL +AE+ ++ + +++R+ F KW + A ++L
Sbjct: 865 YRRMTTDESVRLFEELLEAETRRDVIRRDVMRRVFADFDTRAAKWAAVTERVAVFDVLL 923
>gi|340713019|ref|XP_003395049.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
terrestris]
Length = 1130
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 239/724 (33%), Positives = 376/724 (51%), Gaps = 66/724 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K+ FL P++ RD +R+ P D YDP+TLY+P DFL + +QWWE KSKH D V+FFK
Sbjct: 185 KYDFLQPNKIRDIRRKPPSDPDYDPKTLYVPQDFLNQQTPAMRQWWELKSKHFDCVLFFK 244
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA + E++L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 245 VGKFYELYHMDAVISVNEINLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTEN 304
Query: 410 PEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
P+ + R + + +K DKVVKREIC + +KGT T ++ ++ +++YL++L E S
Sbjct: 305 PDMMAQRCSKMTRPTKFDKVVKREICQISSKGTRVYTPQDVEASTANSNYLLSLVEKCPS 364
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+++S +G+C +D LGQ DD S + LL+ PV ++ LS +T
Sbjct: 365 GSNKSH---YGVCFLDTTIGDFYLGQFEDDRCNSRILTLLAHYPPVHVVYERGNLSQKTL 421
Query: 525 RAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA-------- 575
+ IL +T + + L+ S+FW + TT +KN++ E +DS
Sbjct: 422 K-ILNNTLAACIKEPLLRESQFWSSSTT---LKNLHE---GEYFKNSDSQFQWPAGLQPY 474
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
+Q + GLT + D + ALGG ++ LK+ L++ LL +F+
Sbjct: 475 LNQNDTLGLT-----------SADDKELAVHALGGCVYLLKEYLLEQQLLAQGRFKTYTP 523
Query: 636 SGFGDMAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
F + MVLDA + NL +F G+L L+ C TAFGKRLLR
Sbjct: 524 PDFSNEKSVASNFANNMVLDAITINNLRIF-------GEGSLMKTLDRCCTAFGKRLLRE 576
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RP +I ERQ A+ L N R L+ LPD+ERLL+++ A A N
Sbjct: 577 WICRPSCRKNVIIERQQAIQELMD-NTEVMQNARSILAGLPDLERLLSKIHAQGNAAKMN 635
Query: 751 SN---KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--LTP 803
++ + +++E +KK++ +FI L+ E + A+ E+ +S + + P
Sbjct: 636 NHPDGRAIMFEGQTYSKKKIADFIVTLNAFE----NVLKIVALFEDFKSTIVSRCTKIEP 691
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P++ L +FK AFD EA G ++P GVD +YDS ++ +++A ++L++Q
Sbjct: 692 DGEFPSLRESLDYFKTAFDHEEAKKVGCVVPKRGVDSEYDSVLIELDDVKADAQQYLEKQ 751
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+K G + + K Y +E+P+S + YEL+S +KG+ RY+T K+LL
Sbjct: 752 KKHFG-VKVAFHGSDKKRYQIEIPDSQIKKIGAGYELQSQRKGYKRYYTAETKELLSRQI 810
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCS 983
AE ++ LK + +R+ +F E ++ W V L +LD + A L + C
Sbjct: 811 NAEEHRDKVLKDLNRRIFAKFSEKYDMWNMAV-----YKLSVLDVLISLAEYALSGDMCI 865
Query: 984 SEMN 987
E+N
Sbjct: 866 PEVN 869
>gi|307172014|gb|EFN63608.1| Probable DNA mismatch repair protein Msh6 [Camponotus floridanus]
Length = 1117
Score = 355 bits (912), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 249/704 (35%), Positives = 369/704 (52%), Gaps = 63/704 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ RD +RR D YD RT+Y+P DFL N + +QWWE KSKH D V+FFK
Sbjct: 170 KLDFLQPEKIRDIQRRTLKDPDYDSRTVYVPVDFLNNQTPAMRQWWELKSKHFDCVLFFK 229
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 230 VGKFYELYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTEN 289
Query: 410 PEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
PE + R + K +K DKVVKREIC + T+GT T ++ +++P+++YL++L E
Sbjct: 290 PEMMATRCSKMIKTTKFDKVVKREICQISTRGTRVYTPLDVEASSPNSNYLLSLVERCDP 349
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+ S+ FG+C +D L Q DD S L LL+ P+ +I LS
Sbjct: 350 GQTNSS---FGVCFIDTTIGEFNLSQFDDDYCNSRLLTLLAHHPPMHVIYERGNLS---- 402
Query: 525 RAILRHTRNPLVNDLV-PL---SEFWDAETTVLEIKNIYNRITAESLNKAD----SNVAN 576
R IL+ N L L PL ++FW A TT +KN++ + +D +++ +
Sbjct: 403 RKILQLINNTLPAALKEPLQREAQFWSATTT---LKNLHEGNYFKKEEDSDFAWPADLKS 459
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLP- 634
EGD L P EL + ALGG ++ LK L++ LL F +P
Sbjct: 460 YLNEGDSLGLTPASNKEL---------AVHALGGCVYLLKDFLLEQQLLAQGCFNTYIPP 510
Query: 635 -CSGFGDMAKKPY---MVLDAPALENLEVF-ENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
S + A Y MV+DA ++NL +F ENS L + L+HC TAFGKRLLR
Sbjct: 511 DFSAANNRAGLSYTNTMVIDAVTIKNLRIFGENS--------LNSVLDHCCTAFGKRLLR 562
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPDMERLLARLFASSEANG 748
W+ RP +I +RQ AV L V++ ++ +A LS LPD+ERLL+++ A A
Sbjct: 563 EWICRPSCRKDIIIKRQKAVQEL--VDRIDMIQSARAILSTLPDLERLLSKIHAQGNAAK 620
Query: 749 RNSN---KVVLYE--DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--L 801
++ + +++E +K+ + EF L E + + ES + H
Sbjct: 621 MKNHPDGRAIMFEGPTYSKRIIVEFTMTLAKFE----EVLKFIELFNDFESNLISHCTQY 676
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
P P + IL +FK AFD EA G I+P GVD +YD ++ + + L K+L+
Sbjct: 677 EPNGDFPQLREILDYFKTAFDHEEAKKQGCIVPKKGVDAEYDLVLAELAKNKKDLDKYLE 736
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+Q++ D +I++ K Y +EVPES V YEL+S +KGF RY+T K+LL
Sbjct: 737 KQKQHF-DANISFFGTDKKRYQIEVPESRVKKVGPGYELQSQRKGFKRYYTAEAKELLAR 795
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
E ++ LK + +R+ QF E ++ W + + A + +++
Sbjct: 796 QINTEEHRDKVLKDLNRRIFAQFSEKYDMWHRAIYKVATMDVLI 839
>gi|91082687|ref|XP_971522.1| PREDICTED: similar to DNA mismatch repair protein muts [Tribolium
castaneum]
Length = 1079
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 240/714 (33%), Positives = 355/714 (49%), Gaps = 63/714 (8%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
P++ D++ + D FL PD+ RD +RRP D YDPRTLY+P FL + +Q
Sbjct: 123 PIVSDLNTNWLHNRLD---FLQPDKIRDVNKRRPDDPDYDPRTLYIPQSFLEKQTPAMRQ 179
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEK 393
WW KS HMD V+FFK+GKFYEL+ MDA VG +L YMKGE H GFPE +
Sbjct: 180 WWVLKSTHMDSVLFFKVGKFYELYHMDAVVGVTQLGFSYMKGEFAHSGFPESAYHKMANA 239
Query: 394 LARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELL--SA 448
L KG++V EQTETPE + R K++G DKVV REIC + TK T L +
Sbjct: 240 LIEKGFKVARTEQTETPEMMAERCKKQGRATKFDKVVNREICQISTKATCVYTAQLPDAM 299
Query: 449 NPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
+ + Y+ A+ E + + + R FGIC +D + L + DD CS L LSE
Sbjct: 300 HSQSCYMYAIAEKDVT----GSQRRFGICFIDTSIGVFKLAEFDDDKHCSKLLVCLSEYP 355
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN-IYNRITAESL 567
P I+ LS + + + + R+ L P S+F+ A TT+ ++ N Y R + L
Sbjct: 356 PGLILTERKKLSSKLKLILNTNYRDVRRESLAPESQFYGASTTIEKLLNGNYFRNESNDL 415
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ---VLSALGGTLFYLKKSFLDETL 624
CLP +L + ++ + ++ ALGG L+YL S LD +
Sbjct: 416 ------------------CLPEVLKNVTDGYNAKPEFELMVKALGGCLWYLHDSKLDIQV 457
Query: 625 LRFAKFELLPCSGFGDMAKKP--YMVLDAPALENLEVF--ENSRSGDSSGTLYAQLNHCV 680
+ KFE+ K P M+LD+ + NL + ENS L L++C
Sbjct: 458 VSLGKFEIYQPLEMNVREKSPRSCMILDSVTIVNLNLLGEENS--------LQKTLDYCQ 509
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TAFGKRLL W+ RPL I+ERQ+AV L N + + L +LPD+ER LA++
Sbjct: 510 TAFGKRLLTQWICRPLCVVEKIKERQEAVQELVK-NTSLLKDAQDVLKKLPDLERQLAKI 568
Query: 741 FASSE---ANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
A ++ V YE A +K+++ + + L G EL C + + +S
Sbjct: 569 HTYGNKFFAQDHPDSRAVFYEAATYSKRRIGDLLKTLQGFELAQNLC----PLFKGCQSS 624
Query: 796 QLHHI--LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
L + P + +L FK AFD EA G+IIP GVD +YD A +K +
Sbjct: 625 LLKRLTQFKPDGHYVDLTELLLFFKHAFDQEEAQKEGKIIPKPGVDENYDQAQDAIKAVT 684
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF---FRY 910
L ++L E ++ G +TY K + +++PES V +Y+L +KKG RY
Sbjct: 685 KKLDEYLVELQQFFG-CKVTYFGSDKKRFQIDIPESHTKKVTSEYQLEGTKKGAKPSKRY 743
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
T ++LL E+ +AESE+ ++ + +R+ +F E +W Q + L ++
Sbjct: 744 STSRSRQLLAEMMKAESERAKVIQDLNRRIFQKFSEKREQWEQAIDCITVLDVL 797
>gi|321469768|gb|EFX80747.1| putative MSH6, mismatch repair ATPase [Daphnia pulex]
Length = 1310
Score = 353 bits (906), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 238/701 (33%), Positives = 365/701 (52%), Gaps = 52/701 (7%)
Query: 292 FHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
+ FL P + RD +RRRP D YDPR++Y+P F ++L+ +QWWE K+ + D ++FFK+
Sbjct: 336 YEFLKPANIRDGQRRRPDDPDYDPRSIYIPDSFKQSLTPAMRQWWEMKTNNFDVILFFKV 395
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYEL+ DA + KEL + MKG+ HCGFPER F+ +L KGY+V VEQTETP
Sbjct: 396 GKFYELYHTDALIAVKELGIILMKGDHAHCGFPERGFAKYSSQLIEKGYKVARVEQTETP 455
Query: 411 EQLELR--RKEKGSK-DKVVKREICAVVTKGTLTEGELLSAN--PDASYLMALTESNQSP 465
E + R R + +K D+VV+RE+C + ++GT T + N + +LMAL E + S
Sbjct: 456 EMMTERCKRMSRPTKFDRVVEREVCQITSRGTRTYNAIEGDNWQVEHHFLMALWEKSGSE 515
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
A+ FG+ VD + LGQ DD S L LL+ PVEII +S +T +
Sbjct: 516 AAGGKVE-FGVAFVDTSIGSFQLGQFGDDRYRSRLSTLLTRYNPVEIISAKRGVSNDTTQ 574
Query: 526 AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG-DGL 584
N L + +E WD T+ SL ++D N + +G+
Sbjct: 575 VWNAACPNALHEMVSSNAECWDPAKTL------------RSLAESDYFKVNGDLDWPEGI 622
Query: 585 TCLPGILSEL-ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPC------- 635
L S L ++ + + ALG +YLK+ LD+ LL F++ P
Sbjct: 623 RPLLDDSSSLGLAAKEESELAIRALGALHWYLKECKLDQELLSRRSFQIYYPIDEESQEN 682
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ FG +MVLD L NL+V NS +G ++G+L +LN C TAFG+R+LR WL P
Sbjct: 683 AIFGS-----HMVLDGMTLRNLDVLVNSSTGTTTGSLLERLNRCNTAFGQRMLRHWLCAP 737
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF---ASSEANGRNSN 752
L I +R DAV L N E K L LPD+ERL+ ++ +S +A +
Sbjct: 738 LCQQDAIDDRLDAVEYLLS-NTAAIEEVGKILKSLPDLERLVNKIHSQGSSLKAKNHPDS 796
Query: 753 KVVLYEDA--AKKQLQEFISALHG------CELMDQACSSLGAILENTESRQLHHILTPG 804
+ + ++ +KK++ +F+ L G E + + + +L RQ + + G
Sbjct: 797 RAIFFDAPIYSKKKITDFLLTLEGFRSAQKVEEYFREYTIISKLL-----RQSVKLASQG 851
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L+ F+ AFD +A G ++P GVD YD A +++ E++A K+L +Q+
Sbjct: 852 GEFPDMDEELEFFRLAFDHQQAAKEGTMVPRPGVDKQYDQALERIAEVQADAEKYLLDQK 911
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ G +++V K + LEV E+ YEL+ +KGF RY+T + L+ ++
Sbjct: 912 RHFGG-KVSFVGTDKKRFQLEVSEAAASRANHKYELQGQRKGFKRYYTNESRVLIQQMLA 970
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
AE ++ SALK I +R+ QF HH W + + A L ++L
Sbjct: 971 AEEQRNSALKDISRRIFEQFDNHHLLWEKAIKCLAVLDVVL 1011
>gi|380011142|ref|XP_003689671.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Apis
florea]
Length = 1126
Score = 349 bits (896), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 234/706 (33%), Positives = 367/706 (51%), Gaps = 69/706 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K+ FL P++ RD ++ D YD +TLY+P DFL + +QWWE KSKH D V+FFK
Sbjct: 181 KYDFLQPNKIRDINKKPLSDSDYDSKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVLFFK 240
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V VEQTE
Sbjct: 241 LGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQTEN 300
Query: 410 PEQLELRRKE--KGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
P+ + R + +K DKVVKREIC + +KGT T ++ + P+++YL+++ E S
Sbjct: 301 PDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEKCSS 360
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ S +G+C +D LGQ DD S L LL+ PV ++ LS T
Sbjct: 361 GSNISH---YGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQRTL 417
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ + + L+ S+FW + TT+ ++L++ D S +E
Sbjct: 418 QIFNNNLAACIKESLLRESQFWSSSTTL------------KNLHEGDY-FKKSNSEFQWP 464
Query: 585 TCLPGILSELISTGDSGSQ----VLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSGFG 639
T L L++ S G + ++ + ALGG + LK+ L++ LL +F+ +P
Sbjct: 465 TGLQSYLNKSDSLGLTPAEDKELAVHALGGCTYLLKEYLLEQQLLAQGRFKTYIP----P 520
Query: 640 DMAKKPY--------MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D + K + MVLDA + NL +F G+L L+ C TAFGKRLLR W
Sbjct: 521 DFSNKTFEASKFANNMVLDAITINNLRIF-------GEGSLIKTLDRCCTAFGKRLLREW 573
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ RP +I ERQ A+ L ++ R L+ LPD+ERLL+++ A +N+
Sbjct: 574 VCRPSCRKDVIIERQKAIQELMDHSETIQTA-RSILAGLPDLERLLSKIHAQGNPAKQNN 632
Query: 752 N---KVVLYEDA--AKKQLQEFISALHGCE-------LMDQACSSLGAILENTESRQLHH 799
+ + +++E +KK++ +FI+ L+G E L + CS L + E
Sbjct: 633 HPDGRAIMFEGQTYSKKRIIDFITTLNGFEDVLKVIALFEDFCSILISKCTKVE------ 686
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
P P++ L +FK AFD EA G I+P GVD +YD+ +++EI+ ++
Sbjct: 687 ---PDGEFPSLRESLDYFKTAFDHEEAKRVGCIVPKKGVDSEYDAVLMELEEIKKDSEQY 743
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
L++Q+K G +T+ K Y +E+P+S V +EL+S +KG+ RY+T K+LL
Sbjct: 744 LEKQKKHFG-VKVTFHGSDKKRYQIEIPDSQTKKVGAGFELQSQRKGYKRYYTAESKELL 802
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
AE ++ LK + +R+ QF E ++ W V + L +++
Sbjct: 803 SRQINAEEHRDKVLKDLNRRIFAQFSEKYDMWNMAVYKLSVLDVLI 848
>gi|312384757|gb|EFR29409.1| hypothetical protein AND_01583 [Anopheles darlingi]
Length = 1180
Score = 348 bits (893), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 248/749 (33%), Positives = 371/749 (49%), Gaps = 92/749 (12%)
Query: 264 GSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPD 322
G ++L+ D PV+ K FL P++ +D + RPG YD RTL++P
Sbjct: 186 GPEELATALDEPVVW---------AHQKLEFLKPNKIKDIQGNRPGSEKYDGRTLFVPES 236
Query: 323 FLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGF 382
FL L+ +QWWE KS+H D V+FFK+GKFYEL+ MDA VG EL +MKGE H GF
Sbjct: 237 FLNTLTPAMRQWWEIKSQHYDCVLFFKVGKFYELYHMDAEVGVSELGFSFMKGEFAHSGF 296
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELR---RKEKGSKDKVVKREICAVVTKGT 439
PE + L KGY+V +EQTETPE ++ R ++ DKVV+RE+C V KGT
Sbjct: 297 PETAYDRMSTSLIEKGYKVARIEQTETPEMMQERCKVQRTNSKYDKVVRREVCQVTVKGT 356
Query: 440 LTEGEL--LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
G+ ++ N Y+M + ES SPA +G+C +D + LG+ DD
Sbjct: 357 EVFGQQVRITTNHAPRYMMTIVES--SPAGLGAGCRYGVCFIDTSIGLFHLGEFDDDNQQ 414
Query: 498 SVLCCLLSELRPVEII--KPANMLSPETER---AILRHT-RNPLVNDLVPLSEFWDAETT 551
S L LLS PV I+ + A S T+R +L H R L N+ S+ W E T
Sbjct: 415 SRLLTLLSHYSPVIILTERSATAYSEGTQRIFKTLLAHVPREALTNE----SQLWSGEKT 470
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD--------SGSQ 603
+ R AE S +S+ P +L L+ D S
Sbjct: 471 L--------RYLAEKFYGGSSGGESSK--------WPPVLRSLVDDSDSLGLTPKQSSLL 514
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFE-LLPCSG------------FGDMAKKPYMVLD 650
L ALGG ++YL++S LD+ ++ A FE +P G YMVLD
Sbjct: 515 ALKALGGCIWYLQRSLLDQQVIPLATFEQYIPLDAKDDQTAGETSARIGAANANRYMVLD 574
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
+ L NL++ G+L +++HC T FGKRL W+ P +I +RQ AV
Sbjct: 575 SITLNNLKII------GGEGSLADRMDHCCTKFGKRLFHHWVCVPSCELEVIVQRQQAVT 628
Query: 711 GLRGVNQPFALE-FRKALSRLPDMERLLARL--FASSEANGRN--SNKVVLYED--AAKK 763
L ++ L+ R L +LPDMERL+ ++ F ++ +GRN + + +LYE+ KK
Sbjct: 629 EL--IDHVTLLQDVRALLGQLPDMERLVTQIHAFGNATCSGRNHPAGRAILYEELTYGKK 686
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL---TPGKGLP--AIVSILKHFK 818
+L +FI+ L+G +A +L + +N +S L I + G P + L F
Sbjct: 687 KLSDFIATLNGF----RALIALPDMFDNAKSELLVRITQSASVGGAFPIETMRKQLAFFD 742
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A SG I P GVD +YD+ ++++ ++ L ++L EQ K G T + Y
Sbjct: 743 KAFDHEKALKSGVIAPERGVDSEYDTVEREIETLKTELEEYLAEQSKFFGCT-VVYFGND 801
Query: 879 KDLYLLEVPESLRGSVPRDYEL---RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
K Y LEVPE+ +Y L R+ K G R+ T ++ L +++Q E +++ LK
Sbjct: 802 KKRYQLEVPEARAKKATSEYSLESQRAGKNGVKRFHTEETRQFLRQMTQLEDKRKMVLKD 861
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+ +R+ +F ++ W+ V A L ++
Sbjct: 862 LARRIFEKFSLEYSTWKGCVEMVATLDVL 890
>gi|270014976|gb|EFA11424.1| hypothetical protein TcasGA2_TC013601 [Tribolium castaneum]
Length = 1085
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 240/720 (33%), Positives = 355/720 (49%), Gaps = 69/720 (9%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
P++ D++ + D FL PD+ RD +RRP D YDPRTLY+P FL + +Q
Sbjct: 123 PIVSDLNTNWLHNRLD---FLQPDKIRDVNKRRPDDPDYDPRTLYIPQSFLEKQTPAMRQ 179
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERNF 387
WW KS HMD V+FFK+GKFYEL+ MDA VG +L YMK GE H GFPE +
Sbjct: 180 WWVLKSTHMDSVLFFKVGKFYELYHMDAVVGVTQLGFSYMKAFPSHTGEFAHSGFPESAY 239
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGE 444
L KG++V EQTETPE + R K++G DKVV REIC + TK T
Sbjct: 240 HKMANALIEKGFKVARTEQTETPEMMAERCKKQGRATKFDKVVNREICQISTKATCVYTA 299
Query: 445 LL--SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
L + + + Y+ A+ E + + + R FGIC +D + L + DD CS L
Sbjct: 300 QLPDAMHSQSCYMYAIAEKDVT----GSQRRFGICFIDTSIGVFKLAEFDDDKHCSKLLV 355
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN-IYNR 561
LSE P I+ LS + + + + R+ L P S+F+ A TT+ ++ N Y R
Sbjct: 356 CLSEYPPGLILTERKKLSSKLKLILNTNYRDVRRESLAPESQFYGASTTIEKLLNGNYFR 415
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ---VLSALGGTLFYLKKS 618
+ L CLP +L + ++ + ++ ALGG L+YL S
Sbjct: 416 NESNDL------------------CLPEVLKNVTDGYNAKPEFELMVKALGGCLWYLHDS 457
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKP--YMVLDAPALENLEVF--ENSRSGDSSGTLYA 674
LD ++ KFE+ K P M+LD+ + NL + ENS L
Sbjct: 458 KLDIQVVSLGKFEIYQPLEMNVREKSPRSCMILDSVTIVNLNLLGEENS--------LQK 509
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
L++C TAFGKRLL W+ RPL I+ERQ+AV L N + + L +LPD+E
Sbjct: 510 TLDYCQTAFGKRLLTQWICRPLCVVEKIKERQEAVQELVK-NTSLLKDAQDVLKKLPDLE 568
Query: 735 RLLARLFASSE---ANGRNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAIL 789
R LA++ A ++ V YE A +K+++ + + L G EL C +
Sbjct: 569 RQLAKIHTYGNKFFAQDHPDSRAVFYEAATYSKRRIGDLLKTLQGFELAQNLC----PLF 624
Query: 790 ENTESRQLHHI--LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ +S L + P + +L FK AFD EA G+IIP GVD +YD A
Sbjct: 625 KGCQSSLLKRLTQFKPDGHYVDLTELLLFFKHAFDQEEAQKEGKIIPKPGVDENYDQAQD 684
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+K + L ++L E ++ G +TY K + +++PES V +Y+L +KKG
Sbjct: 685 AIKAVTKKLDEYLVELQQFFG-CKVTYFGSDKKRFQIDIPESHTKKVTSEYQLEGTKKGA 743
Query: 908 ---FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
RY T ++LL E+ +AESE+ ++ + +R+ +F E +W Q + L ++
Sbjct: 744 KPSKRYSTSRSRQLLAEMMKAESERAKVIQDLNRRIFQKFSEKREQWEQAIDCITVLDVL 803
>gi|303321249|ref|XP_003070619.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110315|gb|EER28474.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1221
Score = 347 bits (889), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 277/1000 (27%), Positives = 458/1000 (45%), Gaps = 153/1000 (15%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTP---------------- 61
Q+ I FF +SP P S+ K +P P + NRT
Sbjct: 21 QKSILGFFQPKSSPCTPPATSRTQNVKDEPASSPAPRPSHNRTKASQLSGTQSSHRAPNL 80
Query: 62 SPSPSPTTPSPLQSNPKKSRLVIGQTPS---------PPPSTPAAAKSYGEDVLRKRIRV 112
+PSPS P+ + + + Q P P+T A + GE + +
Sbjct: 81 TPSPSSDAVEPVSDDLNIEQSTVQQLKGSPEAVDVSLPSPATSANGRD-GEQAENQELPS 139
Query: 113 YWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSF 172
P +A K + ++ ED+++ K S + R +
Sbjct: 140 ATPSRRA-------------KKTVDYWESDEDDVVKPPTRK--------SAVGRANKKRR 178
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
+ ED+EE + DD N+G D + ++ + DE + ++ RK
Sbjct: 179 TVAISEDEEEFQ------PDD-----------NIG--DFDDLDDFIVPDESDQEMRPSRK 219
Query: 233 RKSSGVKKSKSDGNAVNA---DFKSPIIKPVKIFGSDKLSNGFDN--------PVMGDVS 281
RK S K ++A D + P G+ K N + +S
Sbjct: 220 RKRSSNPKPTKPSTPISAPQDDMDVDLDIPDSASGTAKKWTYDPNDTECRQHRTTLAPLS 279
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ ++ +K H P++R D + PG YDPRTLY+PP S +KQ
Sbjct: 280 SKSLGKKKEKAHLTEPEKRYPWLANILDMDKNPPGHPDYDPRTLYIPPLAWSRFSPFEKQ 339
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 340 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEYWAN 399
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ KG+++ V+Q+E+ E+R R +K DKV+KRE+ V+T GTL +G +L +
Sbjct: 400 QFVAKGFKIARVDQSESALGKEMRERDDKKKGDKVIKRELSCVLTAGTLVDGAMLQDDM- 458
Query: 452 ASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
++Y +A+ E+ + PA FG+ VD AT + L + DD+D + L+++ RP
Sbjct: 459 STYCVAVKEALVDDLPA-------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRP 511
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ +SP+ R IL++ NP + N L P EFWDA TT E+
Sbjct: 512 QELLLEKGFMSPKALR-ILKNNTNPTTIWNYLKPEREFWDASTTRREL------------ 558
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
D++ + D + P +L + V+S+ G + YL+ ++ L+
Sbjct: 559 ---DASEYFVSVDQDNIEAWPEVLRQ----ARHKELVISSFGALIQYLRMLKIERDLITI 611
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+
Sbjct: 612 GNF-----TWYDPIRKASSLVLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRM 666
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 667 FKQWVCHPLMDSKKINARLDAVDALNA-DSSIRDQFSSQLTKMPDLERLISRVHAGT--- 722
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ--LHHILTPGK 805
+ Q+F+ L G E +D S +L+ T S + H+++
Sbjct: 723 ---------------CKCQDFVRVLEGFEQIDYTMS----LLKQTGSGDGVIGHLIS--- 760
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
+P + +L+++K AFD V+A +SG +P GV+ D+D++ ++++EIEA L + LK R+
Sbjct: 761 SMPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRR 820
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
L ++I Y GK++Y LEVP +R ++P+ ++ S+ K RY+ P ++ L+ +L +A
Sbjct: 821 ELNSSAIIYRDNGKEIYQLEVPVKVR-NIPKSWDQMSATKQAKRYYFPELRGLIRKLQEA 879
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ +K + R +F E++ W V TA L ++
Sbjct: 880 QETHNQIVKEVTSRFYARFDENYQTWLAAVKITAQLDCLI 919
>gi|320035900|gb|EFW17840.1| DNA mismatch repair protein msh6 [Coccidioides posadasii str.
Silveira]
Length = 1204
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 277/1000 (27%), Positives = 457/1000 (45%), Gaps = 153/1000 (15%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTP---------------- 61
Q+ I FF +SP P S+ K +P P + NRT
Sbjct: 4 QKSILGFFQPKSSPCTPPATSRTQNVKDEPASSPAPRPSHNRTKASQLSGTQSSHRAPNL 63
Query: 62 SPSPSPTTPSPLQSNPKKSRLVIGQTPS---------PPPSTPAAAKSYGEDVLRKRIRV 112
+PSPS P+ + + + Q P P+T A + GE + +
Sbjct: 64 TPSPSSDAVEPVSDDLNIEQSTVQQLKGSPEAVDVSLPSPATSANGRD-GEQAENQELPS 122
Query: 113 YWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSF 172
P +A K + ++ ED+++ K S + R +
Sbjct: 123 ATPSRRA-------------KKTVDYWESDEDDVVKPPTRK--------SAVGRANKKRR 161
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
+ ED+EE + DD N+G D + ++ + DE + ++ RK
Sbjct: 162 TVAISEDEEEFQ------PDD-----------NIG--DFDDLDDFIVPDESDQEMRPSRK 202
Query: 233 RKSSGVKKSKSDGNAVNA---DFKSPIIKPVKIFGSDKLSNGFDN--------PVMGDVS 281
RK S K ++A D + P G+ K N + +S
Sbjct: 203 RKRSSNPKPTKPSTPISAPQDDMDVDLDIPDSASGTAKKWTYDPNDTECRQHRTTLAPLS 262
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ ++ +K H P++R D + PG YDPRTLY+PP S +KQ
Sbjct: 263 SKSLGKKKEKAHLTEPEKRYPWLANILDMDKNPPGHPDYDPRTLYIPPLAWSRFSPFEKQ 322
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 323 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEYWAN 382
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ KG+++ V+Q+E+ E+R R +K DKV+KRE+ V+T GTL +G +L +
Sbjct: 383 QFVAKGFKIARVDQSESALGKEMRERDDKKKGDKVIKRELSCVLTAGTLVDGAMLQDDM- 441
Query: 452 ASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
++Y +A+ E+ + PA FG+ VD AT + L + DD+D + L+++ RP
Sbjct: 442 STYCVAVKEALVDDLPA-------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRP 494
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ +SP+ R IL++ NP + N L P EFWDA TT E+
Sbjct: 495 QELLLEKGFMSPKALR-ILKNNTNPTTIWNYLKPEREFWDASTTRREL------------ 541
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
D+ + D + P +L + V+S+ G + YL+ ++ L+
Sbjct: 542 ---DAGEYFVSVDQDNIEAWPEVLRQ----ARHKELVISSFGALIQYLRMLKIERDLITI 594
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+
Sbjct: 595 GNF-----TWYDPIRKASSLVLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRM 649
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 650 FKQWVCHPLMDSKKINARLDAVDALNA-DSSIRDQFSSQLTKMPDLERLISRVHAGT--- 705
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ--LHHILTPGK 805
+ Q+F+ L G E +D S +L+ T S + H+++
Sbjct: 706 ---------------CKCQDFVRVLEGFEQIDYTMS----LLKQTGSGDGVIGHLIS--- 743
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
+P + +L+++K AFD V+A +SG +P GV+ D+D++ ++++EIEA L + LK R+
Sbjct: 744 SMPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRR 803
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
L ++I Y GK++Y LEVP +R ++P+ ++ S+ K RY+ P ++ L+ +L +A
Sbjct: 804 ELNSSAIIYRDNGKEIYQLEVPVKVR-NIPKSWDQMSATKQAKRYYFPELRGLIRKLQEA 862
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ +K + R +F E++ W V TA L ++
Sbjct: 863 QETHNQIVKEVTSRFYARFDENYQTWLAAVKITAQLDCLI 902
>gi|157130502|ref|XP_001661901.1| DNA mismatch repair protein muts [Aedes aegypti]
gi|108871885|gb|EAT36110.1| AAEL011780-PA [Aedes aegypti]
Length = 1130
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 240/729 (32%), Positives = 366/729 (50%), Gaps = 70/729 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ +D + RP YD RTLY+P FL L+ +QWWE K +HMD V+FFK
Sbjct: 172 KLDFLKPEKIKDIQGNRPSSEKYDSRTLYVPESFLGTLTPAMRQWWELKCRHMDCVLFFK 231
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG +EL YMKGE H GFPE+ + L KG++V VEQTET
Sbjct: 232 VGKFYELYHMDATVGVEELGFSYMKGEFAHSGFPEQAYERMATLLVDKGFKVARVEQTET 291
Query: 410 PEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTEGEL--LSANPDASYLMALTESNQS 464
P+ ++ R RK K + DKVVKREIC V KGT G+ L+ N Y++A+TE +
Sbjct: 292 PDMMQERCRKNKTNSKYDKVVKREICQVSLKGTEVFGQQVHLTLNHQPKYMLAITERIKG 351
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+G+C +D + +G+ DD S L LLS P +++ N++S T+
Sbjct: 352 EVGSR----YGVCFIDTSLGVFHVGEFEDDSQGSRLLTLLSHYAPALVLQERNVVSAATQ 407
Query: 525 ---RAILRHTRN-PLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQA 579
+ +L R L N+ S+FW AE T+ + +N Y T + +K + +
Sbjct: 408 QIFKTVLAGIRKEALTNE----SQFWSAERTLKYLAENFYGGSTDDQNSKWPEVIRSLLD 463
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LP---- 634
+ D L P +L L ALGG ++YLK+ LD+ ++ A F + +P
Sbjct: 464 KSDHLGLTPDGNFKL---------ALKALGGCIWYLKRCLLDQQIISLASFVMYIPPDDV 514
Query: 635 --CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
C + +MVLD+ L NL + E +S L +++HC T FGKRLL W+
Sbjct: 515 ETCKNLRIVNSNRFMVLDSVTLNNLRITEGEQS------LVNRMDHCCTKFGKRLLHHWI 568
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL--FASSEANGRN 750
P +I +RQ+AV L + + R+ L LPD+ER+LA++ F ++E + +
Sbjct: 569 CSPSCERDVIVQRQEAVTELIE-DVSLLQDVRQILGELPDLERMLAQIHTFGNAERSKNH 627
Query: 751 SN-KVVLYEDA--AKKQLQEFISALHGC-------ELMDQACSSLGAILENTESRQLHHI 800
+ + +LYE+ KK++Q+FI+ L G EL + S L L T R
Sbjct: 628 PDGRAILYEEQTYGKKKIQDFINTLKGFGTLTKLPELFGKVSSKLLVQLTQTSER----- 682
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
G P + ++ F +AFD +A G I P G+D +YD+ K++K I L ++
Sbjct: 683 ---GGSFPDMADKIRFFDEAFDHEQALKDGVIAPGEGLDAEYDAVHKEIKNILEELEEYK 739
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK---GFFRYWTPNIKK 917
++Q K G I + K + LE+PES Y L KK G RY T ++
Sbjct: 740 RKQEKYFG-CKIAFFGTDKKRFQLEIPESAAKKANSGYTLEGHKKGKNGVKRYHTDETRE 798
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLIL 977
L + Q E +++ LK + +R+ +F + WR + T L ++ + L +
Sbjct: 799 FLKRMMQTEDQRKMVLKDLSRRIFEKFSSSYEMWRTCIDLTGTLDVL----TSLAEYARS 854
Query: 978 QSNSCSSEM 986
+ N C E+
Sbjct: 855 EGNMCVPEI 863
>gi|392866476|gb|EAS27907.2| DNA mismatch repair protein msh6 [Coccidioides immitis RS]
Length = 1221
Score = 346 bits (887), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 283/1000 (28%), Positives = 465/1000 (46%), Gaps = 153/1000 (15%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSN--SNPNPNPNSN------------SNRTPSP 63
Q+ I FF +SP P S+ K S+P P P+ N S+R P+
Sbjct: 21 QKSILGFFQPKSSPCTPPATSRTQNVKDEPASSPAPRPSHNRTKASQLSGTQSSHRAPNL 80
Query: 64 SPSPTTPS--PLQSNPKKSRLVIGQ---TPS------PPPSTPAAAKSYGEDVLRKRIRV 112
+PSP++ + P+ + + + Q +P P P+T A + GE + +
Sbjct: 81 TPSPSSDAVEPVSDDLNIEQSTVQQLKGSPEAVDVSLPSPATSANGRD-GEQAENQELPS 139
Query: 113 YWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSF 172
P +A K V Y + ++E D+ K + +V + RR
Sbjct: 140 ATPSRRA--------------KKTVDYWESDEE--DVVKPPTR--RSAVGRANKKRR--- 178
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
V +DEE E D S DD + + + DE + ++ RK
Sbjct: 179 -TVATSEDEE------EFQPDESIGDFDDLDDFI------------VPDESDQEMRPSRK 219
Query: 233 RKSSGVKKSKSDGNAVNA---DFKSPIIKPVKIFGSDKLSNGFDN--------PVMGDVS 281
RK S K ++A D + P G+ K N + +S
Sbjct: 220 RKRSSNPKPTKPSTPISAPQDDMDVDLDIPNSASGTAKKWTYDPNDTECRQHRTTLAPLS 279
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ ++ +K H P++R D + PG YDPRTLY+PP S +KQ
Sbjct: 280 SKSLGKKKEKAHLTEPEKRYPWLANILDMDKNPPGHPDYDPRTLYIPPLAWSRFSPFEKQ 339
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 340 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEYWAN 399
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ KG+++ V+Q+E+ E+R R +K DKV+KRE+ V+T GTL +G +L +
Sbjct: 400 QFVAKGFKIARVDQSESALGKEMRERDDKKKGDKVIKRELSCVLTAGTLVDGAMLQDDM- 458
Query: 452 ASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
++Y +A+ E+ + PA FG+ VD AT + L + DD+D + L+++ RP
Sbjct: 459 STYCVAVKEALVDDLPA-------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRP 511
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ +SP+ R IL++ NP + N L P EFWDA TT E+
Sbjct: 512 QELLLEKGFMSPKALR-ILKNNTNPTTIWNYLKPEREFWDASTTRREL------------ 558
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
D++ + D + P +L + V+S+ G + YL+ ++ L+
Sbjct: 559 ---DASEYFVSVDQDNIEAWPEVLRQ----ARDNELVISSFGALIQYLRMLKIERDLITI 611
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+
Sbjct: 612 GNF-----TWYDPIRKASSLVLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRM 666
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 667 FKQWVCHPLMDSKKINARLDAVDALNA-DSSIRDQFSSQLTKMPDLERLISRVHAGT--- 722
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ--LHHILTPGK 805
+ Q+F+ L G E +D S +L+ T S + H+++
Sbjct: 723 ---------------CKCQDFVRVLEGFEQIDYTMS----LLKQTGSGDGVIGHLIS--- 760
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
+P + +L+++K AFD V+A +SG +P GV+ D+D++ ++++EIEA L + LK R+
Sbjct: 761 SMPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRR 820
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
L ++I Y GK++Y LEVP +R ++P+ ++ S+ K RY+ P ++ L+ +L +A
Sbjct: 821 ELNSSAIIYRDNGKEIYQLEVPVKVR-NIPKSWDQMSATKQAKRYYFPELRGLIRKLQEA 879
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ +K + R +F E++ W V TA L ++
Sbjct: 880 QETHNQIVKEVTSRFYARFDENYQTWLAAVKITARLDCLI 919
>gi|225556818|gb|EEH05106.1| DNA mismatch repair protein msh6 [Ajellomyces capsulatus G186AR]
Length = 1189
Score = 345 bits (886), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 290/1001 (28%), Positives = 470/1001 (46%), Gaps = 126/1001 (12%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FF KS+ + + + ++ N +P + SN+ P P P L +
Sbjct: 29 QKSILGFFQKSSPSASAASPARRNDASQEPVSSPAQRAASNQKSHKKPEPKLPRSLNTGR 88
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLD---KAWYEGCVKSFDKECNK 134
K+ GQ+ +P PS+ A Y E+ + D +A E C
Sbjct: 89 NKTVTSSGQSITPVPSSDATG--YCEEDAEVEVSAAVNGDGKTEASTESAADGGLMPCPS 146
Query: 135 HLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEISDDR 194
HL+ G L + KE IE + S L+ + R S K+ + EDE +D
Sbjct: 147 HLLT---GLRYRLTM-KELIEAL--SHLLVGKSSRRSLKR---RKTAAGSSDEDEFKND- 196
Query: 195 SDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKS-SGVKKSKSDGNAV---NA 250
++ SDDD + V +D E E K + RKR S + VK S S + +
Sbjct: 197 TEFSDDDLDNFVVPDD----------SEDEVKPSKKRKRPSNTAVKISSSKPSPIRDEEF 246
Query: 251 DFKSPIIKPVKIFGSDKLSNGFD----------NPVMGDVSERFSAREADKFHFLGPDRR 300
DF+ P + G L +D V+ +++ ++ K H P++R
Sbjct: 247 DFELP-----DVCGGSALKWTYDPNDTEPRKPRPAVVRNIAP--GEKKKVKAHMSEPEQR 299
Query: 301 --------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
D R PG YDPRT+Y+PP S +KQ+WE K K D ++FFK GK
Sbjct: 300 YPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGK 359
Query: 353 FYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYEL+E DA +G + DL+ + G PE + + KG+++ V+Q+E+
Sbjct: 360 FYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESAL 419
Query: 412 QLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQ 463
E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y +A+ E+ N
Sbjct: 420 GKEMREKQGKSNGTPGKQDKIIRRELSCVLTSGTLVDGSMLQDDM-STYCVAIKEALVND 478
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
PA FGI VD AT + L + +DD D + +++ RP E++ +++S +
Sbjct: 479 LPA-------FGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMSTKA 531
Query: 524 ERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG 581
R IL++ P L N L P EFW+A+ TV E+ + N +E EG
Sbjct: 532 LR-ILKNNTGPTTLWNYLKPCKEFWEADVTVREL-DASNYFVSE--------------EG 575
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM 641
D + P E + V+SA G + YL+ ++ L+ F + + +
Sbjct: 576 DNIAAWP----EALRQARDKEFVMSAFGALVQYLRMLKIERDLITIGNF-----TWYDPI 626
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
K +VLD L NLE+F NS G GTL+ LN C+T FGKRL + W+ PL ++
Sbjct: 627 KKATSLVLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMDTRK 686
Query: 702 IRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
I R DAV L + +F L+++PD+ERL++R+ A
Sbjct: 687 INSRLDAVDALNA-DSSVQNQFSSQLTKMPDLERLISRVH------------------AG 727
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAF 821
+ + Q+F+ L G E +D S L I + + ++ +P + L+++K AF
Sbjct: 728 RCKAQDFLHVLEGFEKIDYTMSLLKEI--GSGEGAIGQLVA---SMPDLNGYLQYWKTAF 782
Query: 822 DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
D +A +SG ++P GV+ D+D++ ++ EIE+ L + LKE RK LG +I Y GK++
Sbjct: 783 DRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDRLLKEVRKKLGSNAIVYRDNGKEI 842
Query: 882 YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
Y LEVP ++ +VP+D++ S+ K R++ P ++ L+ +L +A+ +K + R
Sbjct: 843 YQLEVPIKIK-NVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVASRFY 901
Query: 942 GQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+F E+++ W V A L ++ SL A L SC
Sbjct: 902 ARFDENYSTWLAAVRTIAQLDCLI---SLAKASSALGYPSC 939
>gi|170054869|ref|XP_001863325.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
gi|167875012|gb|EDS38395.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
Length = 1130
Score = 345 bits (884), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 259/818 (31%), Positives = 401/818 (49%), Gaps = 87/818 (10%)
Query: 204 KNVGKEDVSEDEEVDLVDEQENKVLRGRKR-------------KSSGVKKSKSDGNAVN- 249
++V E V +DEE DE+E + ++ R+R + VK K+ V
Sbjct: 56 ESVVPEKVPKDEE----DEEEVQPMKKRRRIIMDESEEDSDDDSENKVKNEKTPPKVVQL 111
Query: 250 ADFK----------SPIIKPVK----IFGSDKLSNGFDNPVMGDVSERFSAREADKFHFL 295
A FK SP+ K +K + + +L ++ G V E + K FL
Sbjct: 112 AAFKRVETPKNGGESPVQKKIKLEVGVEAAKELPAAKEDDDDGPVLEEPTIWLHQKLDFL 171
Query: 296 GPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFY 354
PD+ +D + + YDPRTL++P +L L+ +QWWE KS+H D V+FFK+GKFY
Sbjct: 172 KPDKIKDIQGNKANSEKYDPRTLFVPESYLATLTPAMRQWWELKSRHYDCVLFFKVGKFY 231
Query: 355 ELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
EL+ MDA VG KEL YMKGE H GFPE+ + L +GY+V VEQTETP+ +
Sbjct: 232 ELYHMDASVGVKELGFSYMKGEFAHSGFPEQAYERMATSLVERGYKVARVEQTETPDMMS 291
Query: 415 LRRKEKGSK---DKVVKREICAVVTKGTLTEGE--LLSANPDASYLMALTESNQSPASQS 469
R K+ + DKVVKREIC V KGT G+ ++ + D +Y++A+ E +
Sbjct: 292 ERCKKNKTNSKYDKVVKREICQVSLKGTEVYGQQVQMTQSADPNYMLAIAERSAGKGKSG 351
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP---ETERA 526
R +G+C +D + LG+ DD S L LLS P ++ +++SP + +
Sbjct: 352 GVR-YGVCFIDTSLGIFHLGEFDDDGQASRLLTLLSHYAPALVLHERSLVSPGIHQIFKT 410
Query: 527 ILRHTRN-PLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQAEGDGL 584
+L R PL N+ S+FW AE T+ + +N Y + E K V + D L
Sbjct: 411 VLAGVRKEPLTNE----SQFWSAEKTLKYLAENHYGSSSDEKSAKWPEAVRCLLDKNDHL 466
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGFGDMAK 643
P SEL L ALGG ++YLK+ LD+ ++ AKFEL +P ++ +
Sbjct: 467 GLTPNEDSEL---------SLKALGGCIWYLKRCLLDQQIVALAKFELYIPPD--DNVTR 515
Query: 644 KP--------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
K +MVLDA L NL R D +L +L+HC T FGKRLL W+ P
Sbjct: 516 KQLKISNSNRFMVLDAITLSNL------RLTDGELSLLNRLDHCCTKFGKRLLHHWVCSP 569
Query: 696 LYNSGLIRERQDAVAGL-RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN-- 752
+I +RQDA+ L +N + R+ L LPD+ER+LA++ + A ++
Sbjct: 570 SCEREIIIQRQDAIKELVEDIN--LLQDVRQILGELPDLERMLAQIHSFGNAERMKNHPD 627
Query: 753 -KVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+ +LYE+ +KK++Q+FI L G + + + + + R L + G P
Sbjct: 628 GRAILYEEQTYSKKKIQDFICTLRGFKALTRLPELFAGVKSDLLIR-LTQLTLKGGVFPD 686
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S + F+++FD A +G I P G+D +YD+ + ++ I L ++ ++Q K G
Sbjct: 687 MASKISFFEESFDHEAALKTGVIAPEKGLDTEYDAVQRDIQGILDELEEYKRKQEKYFG- 745
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK---GFFRYWTPNIKKLLGELSQAE 926
I Y K + LE+PE Y L KK G RY T ++ L + Q E
Sbjct: 746 CKIDYFGSDKKRFQLEIPEGAAKKANSGYSLEGQKKGKNGVKRYHTDETREFLKRMMQTE 805
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+++ LK + +R+ +F ++ W+ V L ++
Sbjct: 806 DQRKVVLKDLARRIFEKFSSAYDMWKTCVDLVGTLDVL 843
>gi|125978269|ref|XP_001353167.1| GA20021 [Drosophila pseudoobscura pseudoobscura]
gi|54641920|gb|EAL30669.1| GA20021 [Drosophila pseudoobscura pseudoobscura]
Length = 1189
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 262/831 (31%), Positives = 401/831 (48%), Gaps = 90/831 (10%)
Query: 187 EDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGN 246
ED+ S D SD D GK+D + +E DE + KKS++
Sbjct: 112 EDDFSGDESDYEPD------GKDDAASEESESGDDEGGEPMDDEESEDDPTPKKSRNKDK 165
Query: 247 AVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA---------------DK 291
N + P+ + VK+ N + +V + + E K
Sbjct: 166 NHNNNNNEPVGQKVKLAEGSTFQEKLKN-IQSNVKQDAAYDEIVTTSSSLDEPVVWPHQK 224
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
FL PD+ +D + RRP YD TL++P FL NLS G +QWW KS + D V+FFK+
Sbjct: 225 LEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNNLSPGVRQWWVLKSNNFDCVLFFKV 284
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYEL+ DA VG EL YM+GE H GFPE +F L +GY+V VEQTETP
Sbjct: 285 GKFYELYHGDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTETP 344
Query: 411 EQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSPA 466
+ + R K K +K DKVV REIC + +GT G P+ +Y++AL E ++
Sbjct: 345 DMVTERCKRIKSTKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLALVEQDEGTW 404
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
S+ FGIC +D + LG+ DD +CS L LLS PV ++ + LS T++
Sbjct: 405 SR-----FGICFIDTSIGDFHLGEFEDDKNCSRLLTLLSHHMPVLLLSEKSALSLRTQQ- 458
Query: 527 ILRHTRNPLVNDLVPL--SEFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQAE 580
++R ++ + +P + +AE T +K + R A N ++ N + Q++
Sbjct: 459 VVRTVLGGILREQLPCNGAHVCNAEKT---LKLLAERYYAG--NGSEDNWPLVLRTMQSD 513
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGFG 639
D L P D+ L ALG ++++ K L+ +L A++++ +P
Sbjct: 514 SDHLGLTP---------SDNYKLALKALGQCVYFINKCLLEPKVLPMARYQMYVPPDQLA 564
Query: 640 DMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ ++ +MVLDA L NL + TL + L+HC T FGKR+L WL
Sbjct: 565 EAKPAVVSALRRSHMVLDATTLSNLRIIGEEH------TLQSTLDHCCTKFGKRMLHHWL 618
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEA--N 747
P + +++ERQ A+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 619 CAPSCDIEILKERQAAIGEL--LRLPSELQEMRALLAPMPDFERNLAQIHLFGNKQVKQT 676
Query: 748 GRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILT 802
G ++ +L+E+ K++L F++ L G A + L + + E+ +++ + T
Sbjct: 677 GHPDSRAILFEEKIYNKQKLVGFMAVLKGF----NALTKLPLMFQQCETPLIKRITQLTT 732
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
G P + L++F AFD A +G I P G+D +YD +++EIE L +L E
Sbjct: 733 SGGSFPDLSEELRYFSTAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIEEIEKRLKTYLVE 792
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLL 919
Q + G +TY K Y L+VPES + Y L KG RY T K LL
Sbjct: 793 QERHFG-CRVTYFGSDKKRYQLDVPESHAHKANKSYALEGQTKGKKPSRRYTTAETKGLL 851
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSL 970
++ QAE K + LK + +RL +F H+ +W+Q + A L ++ GSL
Sbjct: 852 KDMQQAEDAKNAVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVL---GSL 899
>gi|194751549|ref|XP_001958088.1| GF10737 [Drosophila ananassae]
gi|190625370|gb|EDV40894.1| GF10737 [Drosophila ananassae]
Length = 1187
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 245/712 (34%), Positives = 356/712 (50%), Gaps = 68/712 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL +LS G +QWW KS + D V+FFK
Sbjct: 221 KLEFLQPDKIKDKAGRRPDHPDYDSSTLHVPDKFLNSLSPGVRQWWVLKSDNYDCVLFFK 280
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 281 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSNILIDRGYKVARVEQTET 340
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++AL E +
Sbjct: 341 PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLALVEQDLGT 400
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + LG+ DD +CS L LLS PV ++ + LS T++
Sbjct: 401 TSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLLSHNMPVLLLNEKSALSLRTQQ 455
Query: 526 AILRHTRNPLVNDLVPL--SEFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP S+ +AE T +K + R A S +D N + Q+
Sbjct: 456 -IVRTVLGGILKEQVPANGSQACNAEKT---LKLLAERYYAGS--GSDDNWPLVLRTMQS 509
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D L ALG +F++ K L+ +L A++ + +P
Sbjct: 510 DLDHLGLTP---------NDDYKMALKALGECIFFIHKCKLEPKVLPMARYHMYVPPDQI 560
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L A L+HC T FGKRLL W
Sbjct: 561 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLATLDHCCTKFGKRLLHHW 614
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEANG 748
L P + +I+ERQ+A+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 615 LCAPSCDVAVIKERQEAIGEL--IRLPSELQEMRALLAPMPDFERNLAQIHLFGNKQLKE 672
Query: 749 RNS--NKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT-- 802
N ++ +L+E+ K +L F++ L G A + + + E+ L I
Sbjct: 673 MNHPDSRAILFEEKIYNKHKLLGFMAVLKGF----NALTKIPMMFHQCETDLLKRITQLP 728
Query: 803 -PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
G P + LK+F AFD A +G I P G+D +YD+A + EIE L +L+
Sbjct: 729 ESGGSFPDLSKELKYFATAFDHDAAAKTGVIAPQPGMDAEYDAAMDGIAEIEKRLKTYLE 788
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKL 918
EQ + G I Y K Y L+VPE+ + Y L KG RY T + L
Sbjct: 789 EQERHFG-CRIAYFGSDKKRYQLDVPETHAHKANKSYSLEGQTKGKKPCRRYTTAETRAL 847
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSL 970
L ++ QAE + LK + +RL +F H+ +W+Q + A L ++ GSL
Sbjct: 848 LKDMQQAEETRNMVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVL---GSL 896
>gi|325087831|gb|EGC41141.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 1178
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 285/1004 (28%), Positives = 467/1004 (46%), Gaps = 143/1004 (14%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FF KS+ + + + ++ N +P + SN+ P P P L +
Sbjct: 29 QKSILGFFQKSSPSASAASPARRNDASQEPVSSPAQRAASNQKSHKKPEPKLPRSLNTGR 88
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSF------DKE 131
K+ GQ+ +P PS+ A Y E+ + V +D EG +S K+
Sbjct: 89 NKTVTSSGQSITPVPSSDATG--YCEE--DAEVEVSVAIDD---EGADRSSVTPTRRAKK 141
Query: 132 CNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEIS 191
K ++ DD ED L + ++ R S K+ + EDE
Sbjct: 142 AVKSYLESDDDEDVL---------------PINRKSSRRSLKR---RKTAAGSSDEDEFK 183
Query: 192 DDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKS-SGVKKSKSDGNAV-- 248
+D ++ SDDD + V +D E E K + RKR S + VK S S + +
Sbjct: 184 ND-TEFSDDDLDNFVVPDD----------SEDEVKPSKKRKRPSNTAVKISSSKPSPIRD 232
Query: 249 -NADFKSPIIKPVKIFGSDKLSNGFDN----------PVMGDVSERFSAREADKFHFLGP 297
DF+ P + G L +D V+ +++ ++ K H P
Sbjct: 233 EEFDFELP-----DVCGGSALKWTYDPNDTVPRKPRPAVVRNIAP--GEKKKVKAHMSEP 285
Query: 298 DRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
++R D R PG YDPRT+Y+PP S +KQ+WE K K D ++FFK
Sbjct: 286 EQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFK 345
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G + DL+ + G PE + + KG+++ V+Q+E
Sbjct: 346 KGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSE 405
Query: 409 TPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES- 461
+ E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y +A+ E+
Sbjct: 406 SALGKEMREKQGKSNGTPGKQDKIIRRELSCVLTSGTLVDGSMLQDDM-STYCVAIKEAL 464
Query: 462 -NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
N PA FGI VD AT + L + +DD D + +++ RP E++ +++S
Sbjct: 465 VNDLPA-------FGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMS 517
Query: 521 PETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+ R IL++ P L N L EFW+A+ TV E+ + N +E
Sbjct: 518 TKALR-ILKNNTGPTTLWNYLKSCKEFWEADVTVREL-DASNYFVSE------------- 562
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
EGD + P E + V+SA G + YL+ ++ L+ F + +
Sbjct: 563 -EGDNIAAWP----EALRQARDKEFVMSAFGALVQYLRMLKIERDLITIGNF-----TWY 612
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ K +VLD L NLE+F NS G GTL+ LN C+T FGKRL + W+ PL +
Sbjct: 613 DPIKKATSLVLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMD 672
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ I R DAV L + +F L+++PD+ERL++R+
Sbjct: 673 TRKINARLDAVDAL-NADSSVQNQFSSQLTKMPDLERLISRVH----------------- 714
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
A + + Q+F+ L G E +D L I + + ++ +P + L+++K
Sbjct: 715 -AGRCKAQDFLHVLEGFEKIDYTMGLLKEI--GSGEGAIGQLVA---SMPDLSGYLQYWK 768
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A +S ++P GV+ D+D++ ++ EIE+ L + LKE RK LG +I Y G
Sbjct: 769 TAFDRTKAKDSSILVPEAGVEEDFDASHDRISEIESDLDRLLKEVRKKLGSNAIVYRDNG 828
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K++Y LEVP ++ +VP+D++ S+ K R++ P ++ L+ +L +A+ +K +
Sbjct: 829 KEIYQLEVPIKIK-NVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVAS 887
Query: 939 RLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
R +F E+++ W V A L ++ SL A L SC
Sbjct: 888 RFYARFDENYSTWLAAVRTIAQLDCLI---SLAKASSALGYPSC 928
>gi|195495129|ref|XP_002095136.1| GE19856 [Drosophila yakuba]
gi|194181237|gb|EDW94848.1| GE19856 [Drosophila yakuba]
Length = 1190
Score = 340 bits (871), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 238/705 (33%), Positives = 359/705 (50%), Gaps = 63/705 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ D ++RRP YD TL++P +FL LS G +QWW KS + D V+FFK
Sbjct: 224 KLEFLQPDKIMDKQKRRPDHPDYDKSTLHVPENFLNGLSPGVRQWWVLKSSNYDCVLFFK 283
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTET
Sbjct: 284 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGFKVARVEQTET 343
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 344 PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEQDEGT 403
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + LG+ DD +CS L LLS PV ++ + LS +++
Sbjct: 404 WSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLLSHHMPVLLLNEKSALSQRSQQ 458
Query: 526 AILRHTRNPLVNDLVP--LSEFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP ++ AE T +K + R A N AD N + Q+
Sbjct: 459 -IVRTVLGGILKEQVPGNGNQACSAEKT---LKLLAERYYAG--NGADDNWPLVLRTMQS 512
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 513 DMDHLGLTP---------NDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 563
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L + L+HC T FGKRLL W
Sbjct: 564 EDAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 617
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR--LFASSEANGR 749
L P + +I+ERQDA+ L + E R L+ +PD+ER LA+ LF +
Sbjct: 618 LCAPSCDVAVIKERQDAIGELMRMTSELQ-EVRALLAPMPDLERNLAQIHLFGNKRIKQM 676
Query: 750 NS--NKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI--LTP 803
+ ++ +L+E+ K++L F++ L G A + L + E+ L I L
Sbjct: 677 DHPDSRAILFEEKIYNKQKLLGFMAVLKGF----NALTKLPTMFHQCETALLRRITQLPE 732
Query: 804 GKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+G P + L++F AFD A +G I P G+D +YD+A + EIE L +L+E
Sbjct: 733 SEGTFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEIEKRLKSYLEE 792
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLL 919
Q + G ITY K Y L+VPES + Y L KG RY T + LL
Sbjct: 793 QERHFG-CRITYFGSDKKRYQLDVPESHASKANKSYSLEGQTKGKKPCRRYTTAETRALL 851
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
++ AE + + LK + +RL +F ++++W+Q + A L ++
Sbjct: 852 KDMQHAEETRNTVLKDLARRLFEKFSNYYDQWKQCIDCVANLDVL 896
>gi|194872672|ref|XP_001973060.1| GG13556 [Drosophila erecta]
gi|190654843|gb|EDV52086.1| GG13556 [Drosophila erecta]
Length = 1190
Score = 339 bits (869), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 238/711 (33%), Positives = 360/711 (50%), Gaps = 66/711 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D + RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 224 KLEFLQPDKIKDKQGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFK 283
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTET
Sbjct: 284 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGFKVARVEQTET 343
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 344 PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEQDEGT 403
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + +G+ DD +CS L LLS PV ++ + LS +++
Sbjct: 404 WSR-----YGVCFIDTSIGDFHVGEFEDDKNCSRLLTLLSHHMPVLLLNEKSALSQRSQQ 458
Query: 526 AILRHTRNPLVNDLVP--LSEFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP ++ AE T +K + R A S +D N + Q+
Sbjct: 459 -IVRTVLGGILKEQVPGNGTQACSAEKT---LKLLAERYYAGS--GSDDNWPLVLRTMQS 512
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 513 DMDHLGLTP---------NDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 563
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L + L+HC T FGKRLL W
Sbjct: 564 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 617
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR--LFASSEANGR 749
L P + +I+ERQDA+ L + E R L+ LPD ER LA+ LF + +
Sbjct: 618 LCAPSCDVAVIKERQDAIGELIRMASELQ-EVRALLAPLPDFERNLAQIHLFGNKQIKQM 676
Query: 750 NS--NKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILT 802
+ ++ +L+E+ K++L F++ L G A + L + E+ R++ +
Sbjct: 677 DHPDSRAILFEEKIYNKQKLLGFMAVLKGF----NALTKLPTLFHQCETALLRRITQLPE 732
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
G P + L++F AFD A +G I P G+D +YD+A + EIE L +L++
Sbjct: 733 SGGSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEIEKRLKSYLEQ 792
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLL 919
Q + G ITY K Y L+VPES + Y L KG RY T + LL
Sbjct: 793 QERHFG-CRITYFGSDKKRYQLDVPESHASKANKSYSLEGQTKGKKPSRRYTTAETRALL 851
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSL 970
++ AE + LK + +RL +F H+++W+Q + A L ++ GSL
Sbjct: 852 KDMQHAEETRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVL---GSL 899
>gi|24664545|ref|NP_648755.1| Msh6 [Drosophila melanogaster]
gi|13124364|sp|Q9VUM0.2|MSH6_DROME RecName: Full=Probable DNA mismatch repair protein Msh6
gi|10727920|gb|AAF49656.2| Msh6 [Drosophila melanogaster]
gi|211938707|gb|ACJ13250.1| LD20722p [Drosophila melanogaster]
Length = 1190
Score = 337 bits (865), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 237/709 (33%), Positives = 359/709 (50%), Gaps = 62/709 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D + RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 224 KLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFK 283
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTET
Sbjct: 284 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVDRGFKVARVEQTET 343
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 344 PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEKDEGT 403
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + LG+ DD +CS L L+S PV + + LS T++
Sbjct: 404 CSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQ 458
Query: 526 AILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP + AE T +K + R A +D N + Q+
Sbjct: 459 -IVRTVLGGILKEPVPGNGKHACSAEKT---LKLLAERYYAGP--GSDDNWPLVLRTMQS 512
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 513 DMDHLGLTP---------NDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 563
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L + L+HC T FGKRLL W
Sbjct: 564 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 617
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEANG 748
L P + +I+ERQDA+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 618 LCAPSCDVSVIKERQDAIGEL--IRMPTELQEVRALLAPMPDFERNLAQIHLFGNKQIKQ 675
Query: 749 RNS--NKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+ ++ +L+E+ K++LQ F++ L G + + ++ + T +++ + G
Sbjct: 676 MDHPDSRAILFEEKLYNKQKLQGFMAVLKGFNDLTK-LPTMFHQCKTTLLKRITQLPESG 734
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L++F AFD A +G I P G+D +YD+A + E+E L +L EQ
Sbjct: 735 GSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEVEKRLKTYLVEQE 794
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLGE 921
+ G ITY K Y L+VPES + Y L KG RY T + LL +
Sbjct: 795 RHFG-CRITYFGSDKKRYQLDVPESHASKANKSYTLEGQTKGKKPSRRYTTAETRALLKD 853
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSL 970
+ AE + LK + +RL +F H+++W+Q + A L ++ GSL
Sbjct: 854 MQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVL---GSL 899
>gi|307103773|gb|EFN52031.1| hypothetical protein CHLNCDRAFT_139631 [Chlorella variabilis]
Length = 1074
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 259/745 (34%), Positives = 368/745 (49%), Gaps = 134/745 (17%)
Query: 260 VKIFGSDKLSNGF---DNPVMG---DVSERFSAREADKFHFLGPDRRDAKRRR-PGDVYY 312
+ G L+ G D P +++ RFS R F FL PDR RR P D+ Y
Sbjct: 378 ARALGGTPLTGGAGEGDAPASALQEELAPRFSGRVDAAFPFLHPDRIRDAARRRPDDLDY 437
Query: 313 DPRTLYLPPDFLRN--LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL 370
DPRTLY+PP++LR +S GQ+QWWEFK++H D V+ FKMGKFYELFEMDAHV + L L
Sbjct: 438 DPRTLYVPPEWLRQNKVSPGQQQWWEFKAQHYDCVLLFKMGKFYELFEMDAHVAVEVLGL 497
Query: 371 QYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK----DKV 426
YMKG++PH GFPE + E+LAR G++V+V+EQ ETPE L+ R +E+ K D V
Sbjct: 498 SYMKGDKPHAGFPEAAYHGMAERLARAGHKVVVIEQVETPEMLKARNEERARKGLKRDAV 557
Query: 427 VKREICAVVTKGTLTEGELLSANPDAS------------YLMALTESNQSPASQSTDRCF 474
V+RE AV+T+GTLT+ E+++A P+A+ LMA E + +P
Sbjct: 558 VRREKVAVLTQGTLTDAEMVAAQPEAAYLLALAELPVPDALMAAAEHSGAPPCV----WV 613
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP 534
G C VD AT ++++GQ +DD ELR
Sbjct: 614 GACAVDAATGQMLVGQWLDD-----------ELR-------------------------- 636
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
S+FWDA + +++++ A A EG LP L +
Sbjct: 637 --------SQFWDAYS-------VWSQVDA----------AGYWPEG---AALPPALHAV 668
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA------------ 642
+ G++ + ALGG L +L+ LD+ +L + E L FG A
Sbjct: 669 RAGGEAQAAAAHALGGCLSHLRCVLLDKQVLAAGRVEQL-GETFGIGAGLAGSGCEAGGG 727
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
+M LD ALENLEV ENS G GTL A L++CVT G+R LR WL RPL I
Sbjct: 728 GPTHMALDGAALENLEVLENSEGG-PEGTLLAALDNCVTPAGRRRLRQWLCRPLARIPDI 786
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG--RNSNKVVLYEDA 760
+ RQDAVA L G + A R + D+ER +AR+ A+ G R++ V+LYED
Sbjct: 787 QARQDAVAELMGSAEEAAGAARALFKGVADLERAVARITAAGAGLGSARDAPHVILYEDV 846
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDA 820
A+++++ + +AL G + + A ++ + + S L ++TPG+ P + + L + A
Sbjct: 847 ARRRVKAYAAALKGLQQIQDAAAAFQELGDGISSSLLRRLVTPGELFPDMAAALAEMQSA 906
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
DW EA SGR+ P GVD YD+A + +A+L HL E R+
Sbjct: 907 TDWAEAEASGRVEPARGVDGAYDAALDAIDAAQAALQAHLAEARR--------------- 951
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
VP +E SKKG RY + +++L+ L A KE A ILQ +
Sbjct: 952 ---------AGARVPASWEPAQSKKGVKRYTSAALRELVKGLEAAHDAKEKAQGGILQGM 1002
Query: 941 IGQFCEHHNKWRQMVAATAGLTLIL 965
+ F + W V A L ++
Sbjct: 1003 MRAFSQRKALWGAAVDCMAQLDALM 1027
Score = 42.0 bits (97), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 35/89 (39%)
Query: 104 DVLRKRIRVYWPLDKAWYEG---------------CVKS--------------------F 128
DV+ K +RVYWP + W+ G C ++ +
Sbjct: 129 DVVGKSVRVYWPSEGTWFTGDIQGTSLQRQPCAQPCAEAGQQAWSGASGRQGRRCARPKY 188
Query: 129 DKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+ K LV YDDG++E +DL EK W
Sbjct: 189 NGASGKCLVLYDDGDEEWVDLRAEKFAWA 217
>gi|195590405|ref|XP_002084936.1| GD12570 [Drosophila simulans]
gi|194196945|gb|EDX10521.1| GD12570 [Drosophila simulans]
Length = 1192
Score = 337 bits (863), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 239/709 (33%), Positives = 356/709 (50%), Gaps = 71/709 (10%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D + RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 226 KLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFK 285
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTET
Sbjct: 286 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVDRGFKVARVEQTET 345
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 346 PDMMTDRCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEQDEGT 405
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + LG+ DD +CS L L+S PV + + LS T++
Sbjct: 406 WSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQ 460
Query: 526 AILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP + AE T +K + R A N +D N + Q+
Sbjct: 461 -IVRTVLGGILKEPVPGNGKNACSAEKT---LKLLAERYYAG--NGSDDNWPLVLRTMQS 514
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 515 DMDHLGLTP---------DDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 565
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L + L+HC T FGKRLL W
Sbjct: 566 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 619
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEANG 748
L P + +I+ERQDA+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 620 LCAPSCDVAVIKERQDAIGEL--IRMPTELQEVRALLAPMPDFERNLAQIHLFGNKQIKQ 677
Query: 749 RNS--NKVVLYEDAA--KKQLQEFISALHGCE------LMDQACSSLGAILENTESRQLH 798
+ ++ +L+E+ K++L F++ L G M C + A+L ++L
Sbjct: 678 MDHPDSRAILFEEKLYNKQKLLGFMAVLKGFNDLTKLPTMFHQCKT--ALL-----KRLT 730
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
+ G P + L++F AFD A +G I P G+D +YD+A + EIE L
Sbjct: 731 QLPESGGSFPDLSKQLQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDAIGEIEKRLKS 790
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNI 915
+L EQ + G ITY K Y L+VPES + Y L KG RY T
Sbjct: 791 YLVEQERHFG-CRITYFGSDKKRYQLDVPESHASKANKSYTLEGQTKGKKASRRYTTAET 849
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+ LL ++ AE + LK + +RL +F H+++W+Q + A L ++
Sbjct: 850 RALLKDMQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVL 898
>gi|195126507|ref|XP_002007712.1| GI12236 [Drosophila mojavensis]
gi|193919321|gb|EDW18188.1| GI12236 [Drosophila mojavensis]
Length = 1189
Score = 336 bits (861), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 236/704 (33%), Positives = 358/704 (50%), Gaps = 58/704 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL LS +QWW K+ + D V+FFK
Sbjct: 220 KLDFLQPDKIKDKAGRRPDHPEYDKSTLHVPEKFLNTLSPAMRQWWVLKADNFDCVLFFK 279
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ DA VG EL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 280 VGKFYELYHGDADVGVNELGFTYMRGEFAHSGFPEISFDKMSSILVDRGYKVARVEQTET 339
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G + P+ +Y++A+ E ++
Sbjct: 340 PDMMTERCKRIKSTKYDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDEGT 399
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+S+ +GIC +D + +G+ DD CS L L+S PV ++ LS T++
Sbjct: 400 SSK-----YGICFIDTSIGDFHVGEFDDDKSCSRLLTLISHNMPVLLLHEKAALSSRTQQ 454
Query: 526 AILRHTRNPLVNDLVP--LSEFWDAETTVLEIKNIYNRITAESLNKADSNVA--NSQAEG 581
ILR + + +P S+ AE T +K + R A + N+ + + Q++
Sbjct: 455 -ILRTVLGGIQKEQLPGAGSQLCSAEKT---LKLLAERYYAGTGNEDNWPLVLRTMQSDM 510
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGFGD 640
D L P D L ALG + Y+ K L+ +L A+++L +P +
Sbjct: 511 DHLGLTP---------ADPYKLALKALGQCIHYIAKCKLEPKVLPMARYQLYVPPDEQQE 561
Query: 641 MAKKP----------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+P +MVLDA L NL + S L + L+HC T FGKRLL
Sbjct: 562 ETARPKLTSTPLQRSHMVLDATTLSNLRIVGEEHS------LQSTLDHCCTKFGKRLLHH 615
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARL-FASSEANG 748
WL P + ++RERQ+A+ L + QP L + R L+ +PD ER LA++ ++ G
Sbjct: 616 WLCAPSCDLTVLRERQEAIGEL--LRQPDELQQLRALLAPMPDFERHLAQIHLFGNKYIG 673
Query: 749 RNSN---KVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ + + +L+E+ K++L+ F+S L G E + Q + E+T R+L +
Sbjct: 674 QTEHPDSRAILFEEKLYNKQKLRSFMSILKGFETLMQ-LPEMFQRCESTLLRRLTQLSAN 732
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
G P + LK F++AFD A +G + P G+D DYD +++ E+E L +LKEQ
Sbjct: 733 GGNYPDLSKQLKFFENAFDHEAAAKAGVVAPQPGMDADYDEVQQRIAEVEERLQAYLKEQ 792
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLG 920
+ G +TY K Y LEVPE+ + Y L KG RY T K +L
Sbjct: 793 ERHFG-CRVTYFGSDKKRYQLEVPETHAHKANKSYALEGQVKGKKPARRYITTETKAMLK 851
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
++ QAE + + LK + +RL +F H+ +W+Q + A L ++
Sbjct: 852 DMQQAEDARNAVLKDLARRLFEKFSNHYEQWKQCIDCVATLDVL 895
>gi|328771739|gb|EGF81778.1| hypothetical protein BATDEDRAFT_86831 [Batrachochytrium
dendrobatidis JAM81]
Length = 1194
Score = 335 bits (859), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 217/655 (33%), Positives = 339/655 (51%), Gaps = 56/655 (8%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D +DA + P D YDPRTLY+PP N + +KQ+WE K+ H D V+FFK GKFYEL+
Sbjct: 317 DIKDANKNAPDDPNYDPRTLYIPPSAWANFTPFEKQFWEIKAAHWDTVVFFKKGKFYELY 376
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G ++ DL+ + G PE +F + KG++V VEQ E +R
Sbjct: 377 EKDADIGHQKFDLKRTDRVNMRMVGVPESSFDHWAAQFIAKGFKVAKVEQMENSIGKAIR 436
Query: 417 RKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFG 475
+E K DK+++RE+ +V+T GTL + LL+ N +Y MA+ E +++ FG
Sbjct: 437 DRESSKKEDKIIRRELTSVLTAGTLVDAGLLT-NDLNTYCMAIKE---EVSAEHLPPTFG 492
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
IC VD A++ + DD+D + L+ +++P E++ MLS T R + NP+
Sbjct: 493 ICFVDTASAEFNICTFEDDVDRTKFTTLIMQVKPTELVLEKGMLSKATMRILKNSLENPI 552
Query: 536 VNDLVPLSEFWDAETTVLEI-KNIYNRITAESL-NKADSNVANSQAEGDGLTCLPGILSE 593
N L+ EFWD E T+ E+ + Y + A +L N++ S V +S P L E
Sbjct: 553 FNFLLRDKEFWDEEVTMDELNRGGYFKDMASTLPNESSSTVDSS---------WPQALRE 603
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
I + S +SA GG LFYL+ LD +L+ F L + + ++LD
Sbjct: 604 SI----NHSIAMSAFGGLLFYLRSLKLDTSLVSAKNFHL-----YDPIKSSGTLILDGQT 654
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLE+FENS G GTL+ LN CVT FGKRL + WL PL + L+ R DA+
Sbjct: 655 LVNLELFENSSDGSDRGTLFKLLNQCVTPFGKRLFKLWLCHPLQSIDLLNSRLDAIDDFT 714
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
+ R +S+LPD+ER++AR+ S +++FI AL
Sbjct: 715 SI-VGLLDTVRSNISKLPDLERIVARIHTKS------------------CHIKDFILALA 755
Query: 774 GCE----LMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
+ +M + S +G + IL P ++ ++++FK AF+ +A +
Sbjct: 756 AFDRVFTVMTECQSYIGKLQSALLKPLFSEILN-----PELMELIQYFKVAFNHQDAFDE 810
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
G+I H G D +DSA K V IE L + +E K L IT+ IGK+++ +E+P
Sbjct: 811 GKIRLHSGYDDVFDSADKNVVAIEKKLDVYRRECEKKLSYNGITFKNIGKEIFQMEIPAK 870
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
++ VP D+ + S+ K RY+T ++++ E+ +A+ +E A++ I R+ +F
Sbjct: 871 IK--VPSDWTVMSNTKAVNRYYTTKSREMINEMLEAQEIREEAMRQIKTRVFEKF 923
>gi|195021403|ref|XP_001985388.1| GH17031 [Drosophila grimshawi]
gi|193898870|gb|EDV97736.1| GH17031 [Drosophila grimshawi]
Length = 1201
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 236/705 (33%), Positives = 357/705 (50%), Gaps = 60/705 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL +LS G +QWW KS + D V+FFK
Sbjct: 232 KLEFLQPDKIKDKAGRRPDHPEYDKSTLHVPEKFLNSLSPGVRQWWILKSDNYDCVLFFK 291
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ DA VG KEL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 292 VGKFYELYHSDADVGVKELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTET 351
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G + P+ +Y++A+ E ++
Sbjct: 352 PDMMTERCKLIKPTKFDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDEGT 411
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +GIC +D + +G+ DD CS L LLS PV ++ + LS T++
Sbjct: 412 WSK-----YGICFIDTSIGDFHVGEFDDDKSCSRLLTLLSHHMPVLLLHEKSALSARTQQ 466
Query: 526 AILRHTRNPLVNDLVPL--SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
ILR ++ + +P ++ AE T+ + Y + N + + Q++ D
Sbjct: 467 -ILRTVLGGILKEQMPATGTQLCSAEKTLKLLAERYYAGGGPAENNWPLVLRSMQSDTDH 525
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL----------- 632
L P D L ALG + Y+ K L+ +L A+++L
Sbjct: 526 LGLTP---------ADHYKLALKALGQCIHYIAKCKLEPKVLPMARYQLYVPPDQLQLEN 576
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+P + ++ +MVLDA L NL + S L + L++C T FGKRLL WL
Sbjct: 577 IP-AALASTLRRSHMVLDATTLSNLRIVGEEHS------LLSTLDNCCTKFGKRLLHHWL 629
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFAS---SEA 746
P + ++RERQ A+ L +++P L + R L+ +PD ER LA+ LF + ++A
Sbjct: 630 CAPSCDLTVLRERQQAIGEL--LSKPDELQQLRALLAPMPDFERHLAQIHLFGNKRVAQA 687
Query: 747 NGRNSNKVVLYEDAAKKQ-LQEFISALHGCELMDQACSSLGAILENTES---RQLHHILT 802
+ +S + E KQ L+ F+S L G + Q L + ++ E+ ++L + T
Sbjct: 688 DHPDSRAIFFEEKLYNKQKLRSFMSILKGFGALTQ----LPLMFKDCETSLLQRLTQLPT 743
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
G P + LK F+ AFD A+ +G + P GVD DYD + + ++E L +L E
Sbjct: 744 DGGSFPDLSKQLKFFQHAFDHEAADKTGVVAPQPGVDSDYDEVQQGIADVEQRLKTYLTE 803
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS---SKKGFFRYWTPNIKKLL 919
Q + G + Y K Y LEVPE+ V + Y L KK RY T K LL
Sbjct: 804 QERHFG-CRVIYFGSDKKRYQLEVPETHAHKVNKSYALEGQVRGKKPARRYTTAETKALL 862
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
++ QAE + + LK + +RL +F H+ +W+Q + A L ++
Sbjct: 863 KDMQQAEEVRNAVLKDLARRLFEKFSNHYEQWKQCIDCVAMLDVL 907
>gi|195378902|ref|XP_002048220.1| GJ11467 [Drosophila virilis]
gi|194155378|gb|EDW70562.1| GJ11467 [Drosophila virilis]
Length = 1192
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 240/708 (33%), Positives = 356/708 (50%), Gaps = 67/708 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 223 KLDFLQPDKIKDKAGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWILKSDNFDCVLFFK 282
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ DA VG EL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 283 VGKFYELYHGDADVGVNELGFTYMRGEFAHSGFPEISFDKMSSILIDRGYKVARVEQTET 342
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G + P+ +Y++A+ E +
Sbjct: 343 PDMMTERCKRIKATKFDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLAIVEQDAGT 402
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+S+ +GIC +D + +G+ DD CS L L+S PV ++ + LS T++
Sbjct: 403 SSK-----YGICFIDTSIGDFHVGEFDDDKSCSRLLTLISHHMPVLLLHEKSALSSRTQQ 457
Query: 526 AILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
ILR ++ + +P + + AE T +K + R A N + N + Q+
Sbjct: 458 -ILRTVLGGILKEQLPSAGNQVCSAEKT---LKLLAERYYAG--NGTEDNWPLVLRTMQS 511
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL--PCSG 637
+ D L P D L ALG + Y+ K L+ +L A+++L P
Sbjct: 512 DTDHLGLTP---------ADPYKLALKALGQCIHYIAKCKLEPKVLPMARYQLYVPPDQE 562
Query: 638 FGDMAKKP--------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
K+P +MVLDA L NL + S L + L+HC T FGKRLL
Sbjct: 563 QEANTKQPLAATLRRSHMVLDATTLSNLRIVGEEHS------LLSTLDHCCTKFGKRLLH 616
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSE- 745
WL P + ++RERQ+A+ L + QP L + R L+ +PD ER LA+ LF S
Sbjct: 617 HWLCAPSCDLIVLRERQEAIGEL--LRQPDELQQLRALLAPMPDFERHLAQIHLFGSKRI 674
Query: 746 -ANGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI-- 800
++ +L+E+ K++L+ F+S L G E + L + + E++ + +
Sbjct: 675 AQTEHPDSRAILFEEKLYNKQKLRSFMSILKGFETL----MKLPVMFQTCETKLMQRLTQ 730
Query: 801 LTP-GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
L P G P + LK F++AFD A+ +G I P GVD DYD +++ +++ L +
Sbjct: 731 LPPNGGSYPDLSKQLKFFENAFDHEAADKTGVIAPQPGVDADYDEVQQRIADVQERLKIY 790
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS---SKKGFFRYWTPNIK 916
L EQ + G + Y K Y LEVPES + Y L KK RY T K
Sbjct: 791 LTEQERHFG-CRVVYFGSDKKRYQLEVPESHAHKANKSYALEGQVKGKKAARRYTTAETK 849
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
LL ++ QAE + + LK + +RL +F H+ +W+Q + A L ++
Sbjct: 850 ALLKDMQQAEEARNAVLKDLARRLFEKFSNHYQQWKQCIDCVATLDVL 897
>gi|195441342|ref|XP_002068471.1| GK20488 [Drosophila willistoni]
gi|194164556|gb|EDW79457.1| GK20488 [Drosophila willistoni]
Length = 1182
Score = 332 bits (852), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 239/709 (33%), Positives = 351/709 (49%), Gaps = 72/709 (10%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D RRP YD TL++P FL +LS G +QWW KS + D V+FFK
Sbjct: 214 KLEFLQPDKIKDKAGRRPDHPDYDKSTLHVPEKFLNSLSPGVRQWWVLKSDNYDCVLFFK 273
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ DA VG EL YM+GE H GFPE +F L +GY+V VEQTET
Sbjct: 274 VGKFYELYHWDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILIDRGYKVARVEQTET 333
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G + P+ +Y++AL E +
Sbjct: 334 PDMMTERCKRIKATKFDKVVAREICQITDRGTQVFGSQCAIGPNHQPNYMLALVEQDAGT 393
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ FGIC +D + LG+ DD CS L LLS PV +I + LS T++
Sbjct: 394 TSK-----FGICFIDTSMGDFHLGEFEDDKSCSRLLTLLSHHMPVLLIHERSSLSARTQQ 448
Query: 526 AILRHTRNPLVNDLVPL--SEFWDAETTVLEIKNIYNRITAES-LNKADS---NVANSQA 579
ILR + ++ + +P S+ +AE T+ ++ AE + D+ + + Q+
Sbjct: 449 -ILRTVLSGILKEQLPCSGSQVCNAEKTL--------KLLAEGYYAQGDTWPVTLRSMQS 499
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL------ 633
+ D L P D L ALG +FY++K L+ ++ A+++L
Sbjct: 500 DMDHLGLTP---------SDEHKLTLKALGQCIFYIQKCKLEPKVMPMARYQLYRPPDEI 550
Query: 634 -----PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ ++ +MVLDA L NL + S L A L+HC T GKRLL
Sbjct: 551 APDVKASQASQILKRRSHMVLDATTLSNLRIVGEEHS------LLATLDHCCTKMGKRLL 604
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR--LFASSEA 746
WL P +I ERQ A+ LR +++ E R L+ +PD ER LA+ LF + +
Sbjct: 605 HYWLCAPSCEVNVIEERQVAIGELRQMSE--LQEMRALLAPMPDFERHLAQIHLFGTKQV 662
Query: 747 NGRNS--NKVVLYEDAA--KKQLQEFISALHGCE------LMDQACSSLGAILENTESRQ 796
++ +L+E+ K++L F+ L G + LM Q C S ++L+
Sbjct: 663 KESQHPDSRAILFEEKLYNKQKLLSFMGILKGFDALTKIPLMFQQCES--SLLKRITQLP 720
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
H G P + S L++F +AFD A SG I P G+D +YD+ ++ IE L
Sbjct: 721 SH---AEGGLFPDLSSQLRYFAEAFDHEAAAKSGVIAPQPGMDAEYDAVMDRIHAIEDRL 777
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG-FFRYWTPNI 915
+L EQ + G + Y K Y L+VPES + Y L KG RY T
Sbjct: 778 KSYLVEQERHFG-CRLAYFGADKKRYQLDVPESHAHKANKSYTLEGQLKGKKRRYTTAET 836
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K LL ++ QAE + LK + +R+ +F H+ W+Q + A L ++
Sbjct: 837 KTLLKDMQQAEEARNVVLKDLARRVFEKFSNHYEHWKQCIDCVAMLDVL 885
>gi|327350733|gb|EGE79590.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ATCC
18188]
Length = 1244
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 362/719 (50%), Gaps = 96/719 (13%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P++R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 302 KAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFW 361
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 362 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 421
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y
Sbjct: 422 ARVDQSESALGKEMREKQGKTNGTPGKQDKIIRRELACVLTSGTLVDGSMLQDDM-STYC 480
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N PA FGI VD AT + L + +DD+D + +++ RP E++
Sbjct: 481 VAIKEALVNDLPA-------FGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 533
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E L+ ++
Sbjct: 534 LEKSVMSTKALR-ILKNNTGPTTLWNYLKPCKEFWEADITVRE------------LDASN 580
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
V++ +GD + P E + V+SA G + YLK ++ L+ F
Sbjct: 581 YFVSD---DGDNIEAWP----EALRHARDKEFVMSAFGALVQYLKMLKIERDLITIGNF- 632
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLE+F NS G GTL+ LN C T FGKR+ + W
Sbjct: 633 ----TWYDPIKKATSLVLDGQTLINLEIFSNSFDGGQEGTLFQLLNRCTTPFGKRMFKQW 688
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L ++ +F L+++PD+ERL++R+ A S
Sbjct: 689 VCHPLMDTKKINARLDAVDALNA-DRSIQNQFSSQLTKMPDLERLISRVHARS------- 740
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG----- 806
+ Q+F+ L G E +D A +G + E PG+G
Sbjct: 741 -----------CKAQDFLRVLEGFEQIDYA---MGLLKET----------GPGEGVIGQL 776
Query: 807 ---LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+P + L+++K AFD +A +SG ++P GV+ D+D++ ++ EIE+ L + LK+
Sbjct: 777 VASMPDLSGHLQYWKTAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKKV 836
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
RK LG +I Y GK++Y LEVP ++ +VP+ ++ S+ K R++ ++ L+ EL
Sbjct: 837 RKQLGSNAIVYRDNGKEIYQLEVPIKIK-NVPKSWDQMSATKQAKRFYFAELRSLIRELQ 895
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+A+ +K + R +F E+++ W V A L ++ SL A L SC
Sbjct: 896 EAQETHSQIVKEVAGRFYARFDENYSTWLAAVRVIAQLDCLI---SLARASSALGYPSC 951
>gi|261206036|ref|XP_002627755.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis
SLH14081]
gi|239592814|gb|EEQ75395.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis
SLH14081]
Length = 1170
Score = 331 bits (848), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 362/719 (50%), Gaps = 96/719 (13%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P++R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 239 KAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFW 298
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 299 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 358
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y
Sbjct: 359 ARVDQSESALGKEMREKQGKTNGTPGKQDKIIRRELACVLTSGTLVDGSMLQDDM-STYC 417
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N PA FGI VD AT + L + MDD+D + +++ RP E++
Sbjct: 418 VAIKEALVNDLPA-------FGIAFVDTATGQFYLAEFMDDVDMTKFETFVAQTRPQELL 470
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E L+ ++
Sbjct: 471 LEKSVMSTKALR-ILKNNTGPTTLWNYLKPCKEFWEADITVRE------------LDASN 517
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
V++ +GD + P E + V+SA G + YL+ ++ L+ F
Sbjct: 518 YFVSD---DGDNIEAWP----EALRHARDKEFVMSAFGALVQYLRMLKIERDLITIGNF- 569
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLE+F NS G GTL+ LN C T FGKR+ + W
Sbjct: 570 ----TWYDPIKKATSLVLDGQTLINLEIFSNSFDGGQEGTLFQLLNRCTTPFGKRMFKQW 625
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L ++ +F L+++PD+ERL++R+ A S
Sbjct: 626 VCHPLMDTKKINARLDAVDALNA-DRSIQNQFSSQLTKMPDLERLISRVHARS------- 677
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG----- 806
+ Q+F+ L G E +D A +G + E PG+G
Sbjct: 678 -----------CKAQDFLRVLEGFEQIDYA---MGLLKET----------GPGEGVIGQL 713
Query: 807 ---LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+P + L+++K AFD +A +SG ++P GV+ D+D++ ++ EIE+ L + LK+
Sbjct: 714 VASMPDLSGHLQYWKTAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKKV 773
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
RK LG +I Y GK++Y LEVP ++ +VP+ ++ S+ K R++ ++ L+ EL
Sbjct: 774 RKQLGSNAIVYRDNGKEIYQLEVPIKIK-NVPKSWDQMSATKQAKRFYFAELRSLIRELQ 832
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+A+ +K + R +F E+++ W V A L ++ SL A L SC
Sbjct: 833 EAQETHSQIVKEVAGRFYARFDENYSTWLAAVRVIAQLDCLI---SLARASSALGYPSC 888
>gi|412993033|emb|CCO16566.1| DNA mismatch repair protein MutS [Bathycoccus prasinos]
Length = 1374
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 237/761 (31%), Positives = 364/761 (47%), Gaps = 113/761 (14%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVY----YDPRTLYLPPDFLRN--- 326
N + D +F RE F F+ P + + + G+++ YDP TL LP F ++
Sbjct: 315 NGLQADQISKFDERERRLFSFMFPPKL---KDQNGNLFDSPKYDPTTLLLPKTFPKSFPS 371
Query: 327 -------LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH 379
+S GQ+QWW+FK+ H D V+ FKMGKFYE++EMDAHVG KEL L YMKGEQPH
Sbjct: 372 TDGSQHKISPGQQQWWQFKATHFDAVLLFKMGKFYEMYEMDAHVGVKELGLIYMKGEQPH 431
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQL-ELRRKEKGSKDKVVKREICAVVTKG 438
GFPE+N+ N E LAR G++V+ +EQTETP L E ++K+ KD VVKRE AVVT+G
Sbjct: 432 AGFPEKNYQKNAETLARNGHKVVTIEQTETPAMLAERKKKDSRCKDTVVKREKIAVVTRG 491
Query: 439 TLTEGELLSANPDASYLMALTE--SNQSPASQSTDRCFGICVVDVATSRIILGQVM---- 492
T+ + ++ + PDAS+++A++E N+ A FG+C + A + +LG
Sbjct: 492 TMIDRVMVESCPDASHVLAISEFRKNEDGAMH-----FGVCAAECAAGKFVLGAYKVVPG 546
Query: 493 --DDLDCSVLCCLLSELRPVEII-----KPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
D+ S L L EL PVEII A A LR D VP +
Sbjct: 547 SGDEETLSSLRTTLCELNPVEIIFRRGETDAKEFPGPAVAAALR--------DCVPNAHI 598
Query: 546 -WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD--SGS 602
+ +++ K + + + K L P ++ +
Sbjct: 599 RYVCSSSMTSSKGVREEVEKQGYFKP-------------LAAYPDVIETFFGNASNINAE 645
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPC--SGFGDMA------------------ 642
L A G L YL + + ++ + K+E + + FG
Sbjct: 646 AALVAFGTCLLYLNDNLVAHDVVPYGKYETIANDETFFGVEGSVVNSSAPPSPSAMEQEA 705
Query: 643 -------------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
+ +M LDA AL LE+ EN+ G SG+L ++ +A G R+LR
Sbjct: 706 TTTSAATTKRLQYQHAFMRLDAAALSGLEILENTEGG-RSGSLLELVSRAASAPGTRVLR 764
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANG 748
RP ++ +IR +Q A+ LR + + R L PD ER +AR S ++N
Sbjct: 765 MQCCRPSCDASVIRSKQKAIDALRSNDSVDTFQKIRALLKASPDYERCVARCVGSGDSN- 823
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
RN+++VVLYED K +L +F++AL + + + E L L G+
Sbjct: 824 RNADRVVLYEDMRKAKLNDFLAALESVRAVRDVAEEISSNEHVLEKSNLLRALVTGEKTN 883
Query: 809 A---------------IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
A I+ L+ F+ AFDWV+A GRI P GVD D+A + +++ +
Sbjct: 884 ADEEDYCGDLFFPKDEIIKGLREFETAFDWVKAKECGRIEPAAGVDAAVDAADEAIRQAD 943
Query: 854 ASLTKHLKEQRKLL--GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
A L L E R LL + + +VT+ +D +++E+P+ L VP + +KGF R+
Sbjct: 944 AKLENWLDEARALLQCQKSELQFVTVMRDTHIIEIPDRLSRRVPEMWTREGKRKGFERFS 1003
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
+ L + A KE+A++ +++ LI +F + +WR
Sbjct: 1004 CETVDPLREARANAMEAKETAMEGVMKGLILKFRANWREWR 1044
>gi|195327727|ref|XP_002030569.1| GM24498 [Drosophila sechellia]
gi|194119512|gb|EDW41555.1| GM24498 [Drosophila sechellia]
Length = 1192
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 271/842 (32%), Positives = 402/842 (47%), Gaps = 96/842 (11%)
Query: 178 EDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSG 237
E + E+ ED+ SD SD D+ N +D S VD V EN +
Sbjct: 98 EPEMEVTKSEDDFSDCVSDYEPDE---NEASDD-SVSSGVDEVSPSENDMSVDSPTPKKS 153
Query: 238 VKKSKSDGNAVNADFKSPIIKPVKIFGSDKL--------------SNGFDNPVMGDVSER 283
KKSK N N + P K VK+ S +L SN + D+
Sbjct: 154 RKKSKV-LNNNNNNNNEPSSKKVKLESSIQLAEGATFQEKLKNLQSNAKQDASYDDIVTN 212
Query: 284 FSAREA------DKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
S+ + K FL PD+ +D + RRP YD TL++P FL LS G +QWW
Sbjct: 213 TSSLDEPVVWPHQKLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWV 272
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
KS + D V+FFK+GKFYEL+ MDA VG EL YM+GE H GFPE +F L
Sbjct: 273 LKSDNYDCVLFFKVGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVD 332
Query: 397 KGYRVLVVEQTETPEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA-- 452
+G++V VEQTETP+ + R K K +K DKVV REIC + +GT G P+
Sbjct: 333 RGFKVARVEQTETPDMMTDRCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQP 392
Query: 453 SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEI 512
+Y++A+ E ++ S+ +G+C +D + LG+ DD +CS L L+S PV
Sbjct: 393 NYMLAIVEQDEGTWSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLF 447
Query: 513 IKPANMLSPETERAILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKA 570
+ + LS T++ ILR ++ + VP + AE T +K + R A N +
Sbjct: 448 LNEKSALSQRTQQ-ILRTVLGGILKEPVPGNGKNACSAEKT---LKLLAERYYAG--NGS 501
Query: 571 DSN----VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
D N + Q++ D L P D+ L ALG +F++ K L+ +L
Sbjct: 502 DDNWPLVLRTMQSDMDHLGLTP---------DDNYKLALKALGQCIFFIHKCKLEPKVLP 552
Query: 627 FAKFEL-LPCSGFGDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
A+++L +P D ++ +MVLDA L NL + S L + L+H
Sbjct: 553 MARYQLYVPPDQLADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDH 606
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLL 737
C T FGKRLL WL P + +I+ERQDA+ L + P L E R L+ +PD ER L
Sbjct: 607 CCTKFGKRLLHHWLCAPSCDVAVIKERQDAIGEL--IRIPTELQEVRALLAPMPDFERNL 664
Query: 738 AR--LFASSEANGRN--SNKVVLYEDAA--KKQLQEFISALHGCE------LMDQACSSL 785
A+ LF + + + ++ +L+E+ K++L F++ L G M C +
Sbjct: 665 AQIHLFGNKQIKQMDHPDSRAILFEEKLYNKQKLLGFMAVLKGFNDLTKLPTMFHQCKT- 723
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
A+L ++L + G P + L++F AFD A +G I P G+D +YD+A
Sbjct: 724 -ALL-----KRLTQLPESGGSFPDLSKQLQYFATAFDHDAAAKTGVIAPQAGMDAEYDAA 777
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ EIE L +L EQ + G ITY K Y L+VPE+ + Y L K
Sbjct: 778 MDSIGEIEKRLKSYLVEQERHFG-CRITYFGSDKKRYQLDVPETHASKANKSYTLEGQTK 836
Query: 906 G---FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLT 962
G RY T + LL ++ AE + LK + +RL +F H+++W+Q + + L
Sbjct: 837 GKKASRRYTTAETRGLLKDMQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVSNLD 896
Query: 963 LI 964
++
Sbjct: 897 VL 898
>gi|154275572|ref|XP_001538637.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
gi|150415077|gb|EDN10439.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
Length = 1188
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 284/1004 (28%), Positives = 462/1004 (46%), Gaps = 132/1004 (13%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FF KS+ + + + + N +P + SN+ P P P L +
Sbjct: 29 QKSILGFFQKSSPSASAASPACRNDASQEPVSSPAQRAASNQKSHKKPEPKLPRSLNTRR 88
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLD---KAWYEGCVKSFDKECNK 134
K+ GQ+ + PS+ A Y E + D +A E C
Sbjct: 89 NKTVTSSGQSITRVPSSDATG--YCEQDAEVEVSTAVNGDGKTEASTESAADGGLVPCPS 146
Query: 135 HL---VQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEIS 191
HL ++Y EL++ + + SL +R K D EDE
Sbjct: 147 HLLTDLRYRLTMKELIEALSQLLVGTSSRRSLKRR------KTAAGSSD------EDEFK 194
Query: 192 DDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKS-SGVKKSKSDGNAV-- 248
+D ++ SDDD + V +D E E K + RKR S + VK S S + +
Sbjct: 195 ND-TEFSDDDLDNFVVPDD----------SEDEVKPSKKRKRPSNTAVKISSSKPSPIRD 243
Query: 249 -NADFKSPIIKPVKIFGSDKLSNGFD----------NPVMGDVSERFSAREADKFHFLGP 297
DF+ P + G L +D V+ +++ ++ K H P
Sbjct: 244 EEFDFELP-----DVSGGSALKWTYDPNDTEPRKPRPAVVRNIAP--GEKKKAKAHMSEP 296
Query: 298 DRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
++R D R PG YDPRT+Y+PP S +KQ+WE K K D ++FFK
Sbjct: 297 EQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFK 356
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G + DL+ + G PE + + KG+++ V+Q+E
Sbjct: 357 KGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSE 416
Query: 409 TPEQLELRRKEKGS------KDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES- 461
+ E+R K+ S +DK+++RE+ V+T GTL +G +L + ++Y +A+ E+
Sbjct: 417 SALGKEMREKQDKSNGTPVKQDKIIRRELSCVLTSGTLVDGSMLQDDM-STYCVAIKEAL 475
Query: 462 -NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
N PA FGI VD AT + L + +DD D + +++ RP E++ +++S
Sbjct: 476 VNDLPA-------FGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMS 528
Query: 521 PETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+ R IL++ P L N L P EF +A+ TV E+ + N +E
Sbjct: 529 TKALR-ILKNNTGPTTLWNYLKPCKEFCEADVTVREL-DASNYFVSE------------- 573
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
EGD + P E + V+SA G + YL+ ++ L+ F + +
Sbjct: 574 -EGDNIAAWP----EALRQARDKEFVMSAFGALVQYLRMLKIERDLITIGNF-----TWY 623
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ K +VLD L NLE+F NS G GTL+ LN C+T FGKRL + W+ PL +
Sbjct: 624 DPIKKATSLVLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMD 683
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ I R DAV L + +F L+++PD+ERL++R+
Sbjct: 684 TRKINARLDAVDALNA-DSSVQNQFSSQLTKMPDLERLISRVH----------------- 725
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
A + + Q+F+ L G E +D L I + + ++ +P + L+++K
Sbjct: 726 -AGRCKAQDFLHVLEGFEKIDYTMGLLKEI--GSGEGAIGQLVA---SMPDLSGYLQYWK 779
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
AFD +A +SG ++P GV+ D+D++ ++ EIE+ L + LKE RK LG +I Y G
Sbjct: 780 TAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKEVRKKLGSNAIVYRDNG 839
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K++Y LEVP ++ +VP+D++ S+ K R++ P ++ L+ +L +A+ +K +
Sbjct: 840 KEIYQLEVPIKIK-NVPKDWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVAS 898
Query: 939 RLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
R +F E+++ W V A L ++ SL A L SC
Sbjct: 899 RFYARFDENYSTWLAAVRTIAQLDCLI---SLAKASSALGYPSC 939
>gi|225679781|gb|EEH18065.1| DNA mismatch repair protein mutS [Paracoccidioides brasiliensis
Pb03]
Length = 1256
Score = 330 bits (846), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 224/711 (31%), Positives = 354/711 (49%), Gaps = 80/711 (11%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P+ R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 315 KAHMSEPEHRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFW 374
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 375 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 434
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G ++K+++RE+ V+T GTL +G +L + ++Y
Sbjct: 435 ARVDQSESALGKEMREKQGKTGGSVGKQEKIIRRELACVLTSGTLVDGGMLQDDM-STYC 493
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N P FGI VD AT + L + +DD+D + +++ RP E++
Sbjct: 494 VAIKEALVNDLP-------VFGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 546
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E+ D
Sbjct: 547 LEKSVMSTKALR-ILKNNTIPTTLWNYLKPGKEFWEADITVREL---------------D 590
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
++ +GD L P +L E +SA G + YL+ ++ L+ F
Sbjct: 591 ASNYFVSPDGDNLLAWPQVLRE----ARDKEFAMSAFGALVQYLRMLKIERDLITIGNF- 645
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLEVF NS G GTL+ LN CVT FGKR+ + W
Sbjct: 646 ----TWYDPIRKATSLVLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQW 701
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L N +F L+++PD+ERL++R+ A S
Sbjct: 702 VCHPLVDTKKINARLDAVDALNADN-AIRNQFSSQLTKMPDLERLISRVHAGS------- 753
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV 811
+ Q+F+ L G E +D ++G + E + L +P +
Sbjct: 754 -----------CKAQDFLRVLEGFEQIDY---TMGLLKETGSGEGVIGQLV--SSMPDLS 797
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
LK++K AFD +A +SG ++P GV+ D+D + K+ EIE L + LK RK LG T+
Sbjct: 798 GHLKYWKTAFDRSKAKDSGILVPEAGVEEDFDVSHDKITEIEYELDQLLKRVRKQLGSTA 857
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
I Y GK++Y LEVP ++ +VP+ ++ S+ K R++ P ++ L+ +L +A+
Sbjct: 858 IVYRDNGKEIYQLEVPIKIK-TVPKSWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQ 916
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+K + R +F E+++ W V A L ++ SL A L SC
Sbjct: 917 IVKEVAGRFYARFDENYSTWLAAVKVVAQLDCLI---SLAKASSALGYPSC 964
>gi|226291537|gb|EEH46965.1| DNA mismatch repair protein msh6 [Paracoccidioides brasiliensis
Pb18]
Length = 1207
Score = 330 bits (845), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 225/711 (31%), Positives = 353/711 (49%), Gaps = 80/711 (11%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P+ R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 266 KAHMSEPEHRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFW 325
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 326 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 385
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G ++K+++RE+ V+T GTL +G +L + ++Y
Sbjct: 386 ARVDQSESALGKEMREKQGKTGGSVGKQEKIIRRELACVLTSGTLVDGGMLQDDM-STYC 444
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N P FGI VD AT + L + +DD+D + +++ RP E++
Sbjct: 445 VAIKEALVNDLP-------VFGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 497
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+ +S + R IL++ P L N L P EFW+A+ TV E+ D
Sbjct: 498 LEKSAMSTKALR-ILKNNTIPTTLWNYLKPGKEFWEADITVREL---------------D 541
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
++ +GD L P +L E +SA G + YL+ ++ L+ F
Sbjct: 542 ASNYFVSPDGDNLLAWPQVLRE----ARDKEFAMSAFGALVQYLRMLKIERDLITIGNF- 596
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLEVF NS G GTL+ LN CVT FGKR+ + W
Sbjct: 597 ----TWYDPIRKATSLVLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQW 652
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L N +F L+++PD+ERL++R+ A S
Sbjct: 653 VCHPLVDTKKINARLDAVDALNADN-AIRNQFSSQLTKMPDLERLISRVHAGS------- 704
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV 811
+ Q+F+ L G E +D ++G + E + L +P +
Sbjct: 705 -----------CKAQDFLRVLEGFEQIDY---TMGLLKETGSGEGVIGQLV--SSMPDLS 748
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
LK++K AFD +A +SG ++P GV+ D+D + K+ EIE L + LK RK LG T+
Sbjct: 749 GHLKYWKTAFDRSKAKDSGILVPEAGVEEDFDVSHDKITEIEYELDQLLKRVRKQLGSTA 808
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
I Y GK++Y LEVP ++ SVP+ ++ S+ K R++ P ++ L+ +L +A+
Sbjct: 809 IVYRDNGKEIYQLEVPIKIK-SVPKSWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQ 867
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+K + R +F E+++ W V A L ++ SL A L SC
Sbjct: 868 IVKEVAGRFYARFDENYSTWLAAVKVVAQLDCLI---SLAKATSALGYPSC 915
>gi|239611022|gb|EEQ88009.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ER-3]
Length = 1170
Score = 329 bits (843), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 223/719 (31%), Positives = 362/719 (50%), Gaps = 96/719 (13%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P++R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 239 KAHMSEPEQRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFW 298
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 299 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 358
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G +DK+++RE+ V+T GTL +G +L + ++Y
Sbjct: 359 ARVDQSESALGKEMREKQGKTNGTPGKQDKIIRRELACVLTSGTLVDGSMLQDDM-STYC 417
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N PA FGI VD AT + L + +DD+D + +++ RP E++
Sbjct: 418 VAIKEALVNDLPA-------FGIAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 470
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E L+ ++
Sbjct: 471 LEKSVMSTKALR-ILKNNTGPTTLWNYLKPCKEFWEADITVRE------------LDASN 517
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
V++ +GD + P E + V+SA G + YL+ ++ L+ F
Sbjct: 518 YFVSD---DGDNIEAWP----EALRHARDKEFVMSAFGALVQYLRMLKIERDLITIGNF- 569
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLE+F NS G GTL+ LN C T FGKR+ + W
Sbjct: 570 ----TWYDPIKKATSLVLDGQTLINLEIFSNSFDGGQEGTLFQLLNRCTTPFGKRMFKQW 625
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+ PL ++ I R DAV L ++ +F L+++PD+ERL++R+ A S
Sbjct: 626 VCHPLMDTKKINARLDAVDALNA-DRSIQNQFSSQLTKMPDLERLISRVHARS------- 677
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG----- 806
+ Q+F+ L G E +D A +G + E PG+G
Sbjct: 678 -----------CKAQDFLRVLEGFEQIDYA---MGLLKET----------GPGEGVIGQL 713
Query: 807 ---LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
+P + L+++K AFD +A +SG ++P GV+ D+D++ ++ EIE+ L + LK+
Sbjct: 714 VASMPDLSGHLQYWKTAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKKV 773
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
RK LG +I Y GK++Y LEVP ++ +VP+ ++ S+ K R++ ++ L+ EL
Sbjct: 774 RKQLGSNAIVYRDNGKEIYQLEVPIKIK-NVPKSWDQMSATKQAKRFYFAELRSLIRELQ 832
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+A+ +K + R +F E+++ W V A L ++ SL A L SC
Sbjct: 833 EAQETHSQIVKEVAGRFYARFDENYSTWLAAVRVIAQLDCLI---SLARASSALGYPSC 888
>gi|449298624|gb|EMC94639.1| hypothetical protein BAUCODRAFT_111690 [Baudoinia compniacensis
UAMH 10762]
Length = 1206
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 283/1014 (27%), Positives = 456/1014 (44%), Gaps = 145/1014 (14%)
Query: 3 PGKRQNNGRSPLVNPQRQITSFFSK-------SNSPSPSPTISKLNPNKSNSNPNPNPNS 55
PG Q++ +P Q+ I SFF K + +P+ +SK P SN P S
Sbjct: 20 PGSTQSSKPNP---KQKGIASFFQKRPEAPRSAVTPAKKGLVSKDTPLTSNI-----PRS 71
Query: 56 NSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPA-AAKSYGEDVLRKRIRVYW 114
+++ TP+PS T S PP+ P + +S D K
Sbjct: 72 SADITPAPS--------------------SNTVSSPPAAPGLSQQSSAGDACNKENEA-- 109
Query: 115 PLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKK 174
G S K V Y + +D+ G E E L + R ++
Sbjct: 110 -------PGTSYSSPSRKAKKQVNYAESDDD----GDE------EPRPLPGKGRASKRRR 152
Query: 175 VVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK 234
+ V+D+ E E D + DS+DD V +DEE D+ R R R
Sbjct: 153 ISVKDESEDEYGFDAATQAAMDSADD------AGSFVVDDEEEDV----RPVASRKRSRG 202
Query: 235 SSGVKKSKSDGN--AVNADFKS-----PIIKPVKIFGSDKLSNGFDNP-VMGDVSERFSA 286
S+G K + + ++ D + P + + + D + + P + +
Sbjct: 203 SNGRKSTSKPPSPPVLDVDMREESEEIPTVSTAQQWTFDPDAPPSNQPRKLPPKRPQPDP 262
Query: 287 READKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFK 338
+ K H P R DA R P YDPRTLY+PP S +KQ+WE K
Sbjct: 263 NKKQKAHTTDPSERYTWLAHILDADRHPPDHPDYDPRTLYIPPLAWNKFSPFEKQYWEIK 322
Query: 339 SKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARK 397
K + ++FFK GKFYEL+E DA +G + DL+ + G PE + + K
Sbjct: 323 QKFWNTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAK 382
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDASY 454
GY++ V+Q ET ++R ++ G K +KV++RE+ +V+T GTL +G +L + A+Y
Sbjct: 383 GYKIARVDQLETALGKDMRERDDGGKKKEEKVIRRELASVLTSGTLVDGGMLQDDM-ATY 441
Query: 455 LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
A+ E + CFGI VD AT++ L ++DD + + +++ RP E+I
Sbjct: 442 CAAIKE-----VERDGRPCFGIAFVDTATAQFHLADIVDDAEMTRFETFVAQTRPGELIL 496
Query: 515 PANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS 572
+ +S + R IL++ P + N L P EF AE + I D
Sbjct: 497 EKSCISTKALR-ILKNNTAPTTIWNHLKPDKEFLTAEKARMTI---------------DG 540
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
+ DG+ P L + SA+G ++YL ++ L+ F
Sbjct: 541 EAYFDKFVEDGIDTWPAALRQ----AKDKDLTFSAVGALIWYLSTLKIERDLVTCGNF-- 594
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ + + K +VLD +L NLE+F N+ G + GTL+ LN C+T FGKR LR W+
Sbjct: 595 ---AWYDPIRKASSLVLDGQSLINLEIFANTFDGSTEGTLFNMLNRCITPFGKRTLRQWV 651
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL + I +R DAV L + F +LSRLPD+ERL++R+ A
Sbjct: 652 CHPLADPRRIDQRLDAVDAL-NADSTVMDRFTASLSRLPDLERLISRVHA---------- 700
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
+ + Q+F+ L G E ++ S LG+ + L ++T +P +
Sbjct: 701 --------GRCRPQDFVKVLEGFEQIEYTMSLLGSF--GSGEGMLGQLIT---SMPNLAG 747
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
L +KDAFD +A + G IP GV+ ++D + +++ IE L K L + RK LG ++I
Sbjct: 748 ALHDWKDAFDRPKAKDDGIFIPQPGVEAEFDESQERIDNIEKDLQKLLNKARKDLGSSAI 807
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
+ GK++Y LEVP ++G++P +++ SS K R+++P +++L+ +L +A+
Sbjct: 808 KFTDNGKEIYQLEVPIKVKGTIPSNWKQMSSTKAVKRWYSPELERLVRDLKEAQETHAQV 867
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+K++ R +F E ++ W V A L ++ SL A L + SC E
Sbjct: 868 VKALNGRFYARFDEDYSIWLAAVKIIAQLDCLI---SLAKASSSLGAPSCRPEF 918
>gi|347969433|ref|XP_312887.5| AGAP003190-PA [Anopheles gambiae str. PEST]
gi|333468522|gb|EAA08481.5| AGAP003190-PA [Anopheles gambiae str. PEST]
Length = 1290
Score = 328 bits (840), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 227/706 (32%), Positives = 352/706 (49%), Gaps = 58/706 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ +D RPG YD RTL++P +L L+ +QWW KSK+ D V+FFK
Sbjct: 319 KLDFLKPNKIKDIHGNRPGSEKYDNRTLFVPDSYLNTLTPAMRQWWILKSKNFDCVLFFK 378
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL +MKGE H GFPE + L KGY+V VEQTET
Sbjct: 379 VGKFYELYHMDAEVGVTELGFSFMKGEFAHSGFPEAAYDRMSTTLVEKGYKVARVEQTET 438
Query: 410 PEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGE--LLSANPDASYLMALTESNQS 464
P+ ++ R K + + DKVV+REIC + GT G+ ++AN Y++A+TES +
Sbjct: 439 PDMMQERCKVERTTSKYDKVVRREICQITVMGTEVFGQQVTITANHQPRYMLAITESGR- 497
Query: 465 PASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
Q T C +G+C +D + LG+ DD S L LS PV ++ S
Sbjct: 498 ---QGTAGCRYGVCFIDTSIGLFHLGEFEDDNQQSRLLTFLSHYPPVLVLHERATPSEGM 554
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQAEGD 582
+R N L ++ W E T+ + + +Y ++E +K + + E D
Sbjct: 555 QRIFKTLLANVKREALTAGTQLWTGEKTLKYLAETVYGGSSSEG-SKWPATLRTMLDETD 613
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLP------- 634
L P +S L ALGG ++YL++ LD+ +L A F E +P
Sbjct: 614 SLGLTP---------KESYQLALKALGGCVWYLQRCLLDQQVLSLATFEEYVPLDEHRET 664
Query: 635 ----CSGFGDMAK-KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
D A+ K +MVLD+ L NL++ S G+L +++HC + FGKRLL
Sbjct: 665 TETIAKRIDDAARAKRFMVLDSITLNNLKIV------GSEGSLVDRMDHCCSKFGKRLLY 718
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA-NG 748
W+ P I +RQ+AV L N + R+ L +LPDMER LA++ A
Sbjct: 719 NWVCAPSCIKEEILQRQEAVTELI-ENVDLLQDVRQILGQLPDMERHLAQIHGFGLALRD 777
Query: 749 RNSNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL----- 801
+ + +LYE+ KK++++FI+ L G Q+ L + + S+ L +
Sbjct: 778 HPARRAILYEEHVYGKKKMRDFIATLKGF----QSLLPLPQMFASVHSQLLVRLTQKANS 833
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
P P++ ++ F+ +FD +A SG I+P G+D +YD+ +++K++ A L +L
Sbjct: 834 NPAGAFPSMEKQIEFFESSFDHEKALKSGSIVPEKGLDTEYDTIEQEIKDLNAELEAYLA 893
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKL 918
EQ K G T + Y K + LEVPE DY L +K G R+ T ++
Sbjct: 894 EQSKFFGCT-VKYFGNDKKRFQLEVPEGRAKKATGDYTLEGTKTGKNATKRFHTEETRRF 952
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
L ++ E ++S LK + +R+ +F ++ W+ + A L ++
Sbjct: 953 LKQMMLLEDRRKSVLKDLARRIFERFSRDYDMWKGCIELVATLDVL 998
>gi|328493202|gb|AEB20401.1| msh6 [Schmidtea mediterranea]
Length = 1174
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 263/877 (29%), Positives = 427/877 (48%), Gaps = 113/877 (12%)
Query: 174 KVVVEDDEEMENVEDEISDDRSDSSDDDWNK-NVGKEDVSEDEEVDLV------------ 220
K+ +D++ M + +++ SDD ++S + + ED D+E L+
Sbjct: 39 KIKFKDNDSMPSTDNKDSDDFRNNSRKSFKRLKALSEDDESDKENSLIFSTNKKIKVKPN 98
Query: 221 ------DEQENKVLRGRKRKSSGV----KKSKSDGNAVNADFKSPIIKPVKIFGSD-KLS 269
+ EN+ L G ++ + KK D ++N D ++ I +D +
Sbjct: 99 YESPPMTKTENEFLSGIRKNVNASTPHKKKPTKDEKSIN-DSTKALLSSFSINANDSNIE 157
Query: 270 NGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLS 328
+ D + E + FL + RDA+RR+P YDP TL++P F+ +L
Sbjct: 158 TNISQVIEDDFKNDIESYEHFSYEFLKKENIRDAQRRKPDHPDYDPTTLFIPESFMMSLI 217
Query: 329 E-----GQKQWWEFKSK-HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGF 382
+ G KQWW+ K+ +M+ + FFK+GKFYEL+ MDA EL L YM+G H GF
Sbjct: 218 QSKLTPGLKQWWKIKANGNMETIFFFKVGKFYELYHMDAVTAVSELGLTYMRGNYAHSGF 277
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL-- 440
PE FS ++L G++V VEQTET E + R K + SK+KVV REIC V+T GT
Sbjct: 278 PEIAFSKMADQL---GFKVARVEQTETVEAMTERIKHESSKNKVVNREICQVITPGTRGF 334
Query: 441 -----------TEG-ELLSANPDASYLM-----ALTESNQSPASQSTDRCFGICVVDVAT 483
EG E L DA L+ +L E N ++T V++
Sbjct: 335 SLRNRTCRETGQEGSEELGYIEDAGGLLYSFKESLIEENVKGKLKNT--------VNIGV 386
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI---LRHTRNPLVNDLV 540
+ ++ Q DD S L+S +P EII LS T+ L T+ +
Sbjct: 387 A--LIAQFADDDQRSRFRTLISRFQPNEIIYLKGNLSKNTQHVFNSCLAATKKECFTNN- 443
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS 600
+F +E T+ + ++++ +A +N + +GLT L+E + G S
Sbjct: 444 --KQFLSSEDTLSRL------MSSDYFAEAPANKLSRFGLPNGLT---KTLNEADNLGRS 492
Query: 601 GSQ----VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA---------KKPY- 646
S+ +S LG L+YL K +D+ L+ A F L S GD K+P+
Sbjct: 493 SSKEYELAVSCLGALLYYLGKCLIDKYLVSIADFNLYYPSD-GDCIQPHQLAIDDKEPFY 551
Query: 647 -----MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
M++D+ L NL++ +NS G GTL +L+ +TAFG+RLL W+A PL +
Sbjct: 552 THQSHMIIDSNTLTNLDLLKNSSLGGIDGTLLERLDFSLTAFGRRLLIQWIATPLCDPDK 611
Query: 702 IRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA---SSEANGRNSNKVVLYE 758
I ERQ A+ L ++ + + L PD+E+L+A++ S + ++ VLYE
Sbjct: 612 IIERQKAIKELIELDANLS-NIKNNLKSCPDLEKLVAKIHVLGLSKSVSDHPDSRAVLYE 670
Query: 759 DA--AKKQLQEFISALHGCE--LMDQACSSLGAILENTESRQLHHILTPGKG-----LPA 809
+++++ +F++ L + + Q + + +N +S+ L I+ K P
Sbjct: 671 GLLYSRRKITDFVNTLTAFDNIIKIQLEFTRMHVEQNIQSKLLRKIMLHSKDSKIGEFPD 730
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG- 868
I I+ FK AFD A +G+IIP G+D DYD + +KEIE L ++L++Q+K++
Sbjct: 731 ISEIISFFKTAFDQENAKKNGKIIPESGIDADYDESVALIKEIERDLAEYLEKQKKIINS 790
Query: 869 DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+ I + GK+ + LE+PES VP Y S +KGF RY T I+ LL +L AE +
Sbjct: 791 NVLINFFGTGKNRFQLEIPESKCSKVPSTYIASSQRKGFKRYLTVEIEGLLKKLINAEDK 850
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++ LK+I+ ++ +F EH+ +W Q++ + A +L
Sbjct: 851 RDLVLKNIMSKIFAKFDEHYFQWTQVINSIAQFDALL 887
>gi|70994396|ref|XP_751995.1| DNA mismatch repair protein Msh6 [Aspergillus fumigatus Af293]
gi|66849629|gb|EAL89957.1| DNA mismatch repair protein Msh6, putative [Aspergillus fumigatus
Af293]
Length = 1213
Score = 326 bits (835), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 213/692 (30%), Positives = 353/692 (51%), Gaps = 69/692 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + P YDPRT+Y+PP S +KQ+WE K K D ++FFK GKFYEL+E
Sbjct: 291 RDIEGHPPDHPDYDPRTIYIPPLAWAKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEN 350
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-- 416
DA +G + DL+ + G PE + + KG+++ V+Q+E+ E+R
Sbjct: 351 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRER 410
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+K G +DK++KRE+ V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 411 DGKKAGGKEDKIIKRELSCVLTAGTLVEGSMLQDDM-STYCVAIKEAIVDDRPA------ 463
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FG+ VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 464 -FGLAFVDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKSTISQKALR-ILKNNT 521
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P + N L P EFW+A+ TV E+ D++ + D L P
Sbjct: 522 GPTTIWNHLKPGKEFWEADITVKEL---------------DASEYFVSQDDDNLQAWPET 566
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ LD L+ F S + + K +VLD
Sbjct: 567 LRE----ARDKEMVMSAFGALVQYLRVLKLDRDLITIGNF-----SWYDPIRKASSLVLD 617
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 618 GQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAVD 677
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ AA + Q+F+
Sbjct: 678 AL-NADSSVRDQFSSQLTKMPDLERLISRIH------------------AANCKAQDFVR 718
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ + +L++ S I G+P + S+L+++K AFD +A +G
Sbjct: 719 VLEGFEQIEYTIT----LLKDNGSSSEGVIGQLISGMPDLSSLLEYWKTAFDRTKAKENG 774
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+D++ ++++++ L LK QR+ LG T+I Y GK++Y LEVP +
Sbjct: 775 ILVPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKEIYQLEVPIKV 834
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++ L+ +L +A+ +K + R +F E++
Sbjct: 835 K-NIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFYARFDENYTT 893
Query: 951 WRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
W V + L ++ SL A L SC
Sbjct: 894 WLAAVRIISQLDCLI---SLAKASSSLGHPSC 922
>gi|159125092|gb|EDP50209.1| DNA mismatch repair protein Msh6, putative [Aspergillus fumigatus
A1163]
Length = 1213
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 213/692 (30%), Positives = 353/692 (51%), Gaps = 69/692 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + P YDPRT+Y+PP S +KQ+WE K K D ++FFK GKFYEL+E
Sbjct: 291 RDIEGHPPDHPDYDPRTIYIPPLAWAKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEN 350
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-- 416
DA +G + DL+ + G PE + + KG+++ V+Q+E+ E+R
Sbjct: 351 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRER 410
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+K G +DK++KRE+ V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 411 DGKKAGGKEDKIIKRELSCVLTAGTLVEGSMLQDDM-STYCVAIKEAIVDDRPA------ 463
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FG+ VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 464 -FGLAFVDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKSTISQKALR-ILKNNT 521
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P + N L P EFW+A+ TV E+ D++ + D L P
Sbjct: 522 GPTTIWNHLKPGKEFWEADITVKEL---------------DASEYFVSQDDDNLQAWPET 566
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ LD L+ F S + + K +VLD
Sbjct: 567 LRE----ARDKELVMSAFGALVQYLRVLKLDRDLITIGNF-----SWYDPIRKASSLVLD 617
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 618 GQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAVD 677
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ AA + Q+F+
Sbjct: 678 ALNA-DSSVRDQFSSQLTKMPDLERLISRIH------------------AANCKAQDFVR 718
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ + +L++ S I G+P + S+L+++K AFD +A +G
Sbjct: 719 VLEGFEQIEYTIT----LLKDNGSSSEGVIGQLISGMPDLSSLLEYWKTAFDRTKAKENG 774
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+D++ ++++++ L LK QR+ LG T+I Y GK++Y LEVP +
Sbjct: 775 ILVPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKEIYQLEVPIKV 834
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++ L+ +L +A+ +K + R +F E++
Sbjct: 835 K-NIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFYARFDENYTT 893
Query: 951 WRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
W V + L ++ SL A L SC
Sbjct: 894 WLAAVRIISQLDCLI---SLAKASSSLGHPSC 922
>gi|115397903|ref|XP_001214543.1| DNA mismatch repair protein msh6 [Aspergillus terreus NIH2624]
gi|114192734|gb|EAU34434.1| DNA mismatch repair protein msh6 [Aspergillus terreus NIH2624]
Length = 1206
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 281/996 (28%), Positives = 458/996 (45%), Gaps = 142/996 (14%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FF KS+ +PS N+ P +P ++ S + S + +
Sbjct: 33 QKSILGFFQKSSPSTPS--------TARNAGPASSPAQRASEQRSANGS------AKGDK 78
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECN---- 133
KKS Q +P PS+ ++ + R E +S +K+ +
Sbjct: 79 KKSAPKFSQDLAPVPSSDLVVPEEEDEEKKAR------------ESPSESLEKKTSSPSR 126
Query: 134 --KHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDEEMENVEDEIS 191
K V Y + + E G++ E + R +R +KV E DEE +
Sbjct: 127 RAKKQVNYMESDSE----GEDDDEQIFRPGRKNNRPKR---RKVSPESDEEFDQ------ 173
Query: 192 DDRSDS--SDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVN 249
D D+ SDD+ + + +D DEEV K + RKR S KS S A +
Sbjct: 174 -DGGDAGYSDDEMDDFIVADD--SDEEV--------KQPKKRKRPSQPKPKSSSLPPAGS 222
Query: 250 ADFKSPIIKPVKIFGSD-KLSNGFDN--------------PVMGDVSERFSAREADKFHF 294
D + P G+ K + DN P G V ++ E ++ +
Sbjct: 223 PDEDIDLDIPEATSGTALKWTYDPDNQEPRQERATVPSSKPSSGTVKQKAHVTEPEQRYP 282
Query: 295 LGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFY 354
+ RD PG YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFY
Sbjct: 283 WLANIRDIDGHPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFY 342
Query: 355 ELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
EL+E DA +G + DL+ + G PE + + KGY++ V+Q E+
Sbjct: 343 ELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGYKIARVDQAESALGK 402
Query: 414 ELRR---KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQ 468
E+R K+ G +DKV++RE+ V+T GTL EG +L + +++ +A+ E+ + PA
Sbjct: 403 EMRERDGKKGGKEDKVIRRELSCVLTAGTLVEGSMLHDDM-STFCVAIKEAIIDDHPA-- 459
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
FG+ VD AT + + ++MDD D + +++ RP E++ + +SP+ R IL
Sbjct: 460 -----FGLAFVDTATGQFFMSELMDDADMTKFETFVAQTRPQELLLEKSTISPKALR-IL 513
Query: 529 RHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
++ P + N L P EFW+A+ TV E+ ++ +E + D L
Sbjct: 514 KNNTGPTTIWNYLKPGKEFWEADITVKEL-DVSEYFVSE--------------DDDNLKA 558
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P E + V+SA G + YL+ LD L+ F S + + K
Sbjct: 559 WP----EALRVARDKELVMSAFGALVQYLRVLKLDRDLITIGNF-----SWYDPIKKASS 609
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+VLD L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R
Sbjct: 610 LVLDGQTLINMEIFANSFDGGSDGTLFQLLNRCITPFGKRMFKQWVCHPLVDAKKINARL 669
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
DAV L + +F L+++PD+ERL++R+ AA + Q
Sbjct: 670 DAVDAL-NADPSVRDQFSSQLTKMPDLERLISRVH------------------AANCKAQ 710
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA 826
+F+ L G E Q ++ + E+ + L +P + +L+++K AFD +A
Sbjct: 711 DFLRVLEGFE---QIAYTMSLLKESGSGEGVIGQLI--NAMPNLDDLLEYWKTAFDRSKA 765
Query: 827 NNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
++G ++P GV+ D+D++ + ++ L LK RK LG T+I Y GK++Y +EV
Sbjct: 766 RDNGILVPKLGVEEDFDNSQANISQLHNDLDNLLKRVRKELGSTAICYRDNGKEIYQMEV 825
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P ++G +P++++ S+ K RY+ P ++ L+ +L +A+ +K + R +F E
Sbjct: 826 PIKVKG-IPKNWDQMSATKQVKRYYFPELRTLIRKLQEAQETHSQIVKEVAGRFYARFDE 884
Query: 947 HHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
H+ W V + L ++ SL A L SC
Sbjct: 885 HYATWLAAVRIVSQLDCLI---SLAKASASLGQPSC 917
>gi|119500868|ref|XP_001267191.1| DNA mismatch repair protein Msh6, putative [Neosartorya fischeri
NRRL 181]
gi|119415356|gb|EAW25294.1| DNA mismatch repair protein Msh6, putative [Neosartorya fischeri
NRRL 181]
Length = 1214
Score = 325 bits (832), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 353/692 (51%), Gaps = 69/692 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD P YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 292 RDIDGHAPDHPDYDPRTIYIPPLAWAKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 351
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-- 416
DA +G + DL+ + G PE + + KG+++ V+Q+E+ E+R
Sbjct: 352 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRER 411
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+K G +DK++KRE+ V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 412 DGKKSGGKEDKIIKRELSCVLTAGTLVEGSMLQDDM-STYCVAIKEAIIDDRPA------ 464
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FG+ VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 465 -FGLAFVDTATGQFSLSEFVDDVDMTKFETFVAQTRPQELLLEKSTISQKALR-ILKNNT 522
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P + N L P EFW+A+ TV E+ D++ + D L P
Sbjct: 523 GPTTIWNHLKPGKEFWEADITVKEL---------------DASEYFVSQDDDNLQAWPEP 567
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ LD L+ F S + + K +VLD
Sbjct: 568 LRE----ARDKELVMSAFGALVQYLRVLKLDRDLITIGNF-----SWYDPIRKASSLVLD 618
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 619 GQTLINMEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAVD 678
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ AA + Q+F+
Sbjct: 679 AL-NADSSVRDQFSSQLTKMPDLERLISRIH------------------AANCKAQDFVR 719
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ + +L+++ S I G+P + S+L+++K AFD +A +G
Sbjct: 720 VLEGFEQIEYTIT----LLKDSGSSGEGVIGQLISGMPDLSSLLEYWKTAFDRTKAKENG 775
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+D++ ++++++ L LK QR+ LG T+I Y GK++Y LEVP +
Sbjct: 776 ILVPKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKEIYQLEVPIKV 835
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++ L+ +L +A+ +K + R +F E++
Sbjct: 836 K-NIPKNWDQMSATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFYARFDENYTT 894
Query: 951 WRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
W V + L ++ SL A L SC
Sbjct: 895 WLAAVRIISQLDCLI---SLAKASSSLGHPSC 923
>gi|258578083|ref|XP_002543223.1| DNA mismatch repair protein msh6 [Uncinocarpus reesii 1704]
gi|237903489|gb|EEP77890.1| DNA mismatch repair protein msh6 [Uncinocarpus reesii 1704]
Length = 1200
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 276/999 (27%), Positives = 460/999 (46%), Gaps = 155/999 (15%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPN------------SNSNR----TP 61
QR I FF +SP PT S++N K N +P PN + S R TP
Sbjct: 4 QRSILGFFQPKSSPCTPPTSSRVNKVKEEPNSSPAPNGAKSSVQSTKQTAKSRRGLHLTP 63
Query: 62 SPSPSPTTPSPLQSNPKKSRL--VIGQTPS-----PPPSTPAAAKSYGEDVLRKRIRVYW 114
+PS P N +S + V G + P P+T A + G+ + V
Sbjct: 64 APSSDAVEPGSDDFNVHQSTIEKVKGSLSTVDVSLPSPATSANGHNGGQAESEQETSVT- 122
Query: 115 PLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKK 174
P +A + + Y++ ED+ E V+ + L R +K
Sbjct: 123 PTRRA--------------RKAINYEESEDD---------EIVKPTSRRLVTGRATKKRK 159
Query: 175 VVV--EDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
+ ED++E + +G D +D++ + DE E++ RK
Sbjct: 160 TIAVSEDEDEFQ---------------------LGNTDFFDDDDFIVPDESEDEAGSSRK 198
Query: 233 RKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSA------ 286
RK S + + + P++ + GS NP + E +A
Sbjct: 199 RKRSSNNLATKSAPMSSPRDEEPVLD-IPNVGSGTTQKWTYNPADIESREPRTALARPSP 257
Query: 287 ------READKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
+ +K H P++R D ++ PG YDPRTLY+PP S +K
Sbjct: 258 SSKSLEKRKEKAHMTEPEKRYPWLANILDIEKNPPGHPDYDPRTLYIPPLAWTKFSPFEK 317
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNV 391
Q+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 318 QYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEHWA 377
Query: 392 EKLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
+ KG+++ V+Q+E+ E+R R +K DK++KRE+ V+T GTL +G +L +
Sbjct: 378 NQFVAKGFKIARVDQSESALGKEMRERGDKKKGDKIIKRELSCVLTAGTLVDGAMLQDDM 437
Query: 451 DASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
++Y +++ E+ + PA FG+ VD AT + L + +DD+D + L+++ R
Sbjct: 438 -STYCVSIKEALVDDLPA-------FGVSFVDTATGQFFLTEFVDDIDMTKFETLVAQTR 489
Query: 509 PVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
P E++ +SP+ R IL++ NP + N L P EFWDA TT E
Sbjct: 490 PQELLLEKGFMSPKALR-ILKNNTNPTTIWNHLKPGREFWDASTTRRE------------ 536
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
L + V+ Q D + P +L ++ V+S+ G + YL+ ++ L+
Sbjct: 537 LEAGEYFVSMDQ---DNIEAWPEVLQQV----RDKDLVISSFGALIQYLRMLKIERDLIT 589
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
F + + + K +VLD L NLE+F NS G GTL+ LN C+T FGKR
Sbjct: 590 IGNF-----TWYDPIRKASSLVLDGQTLINLEIFANSFDGGQHGTLFQLLNRCITPFGKR 644
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA 746
L + W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 645 LFKQWVCHPLMDSRQINARLDAVEALNA-DSSIRDQFSSQLTKMPDLERLISRVHAGT-- 701
Query: 747 NGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG 806
+ Q+F+ L G E +D ++G + + + L
Sbjct: 702 ----------------CKCQDFVRVLEGFEQIDY---TMGLVKQTGSGDGVIGQLI--SS 740
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
+P + S+L++++ AFD V+A +SG IP GV+ D+D++ ++++ +E L + LK R+
Sbjct: 741 MPDLTSLLQYWETAFDRVKAKDSGTFIPQPGVEEDFDASNERIESLEGDLNQLLKRCRRE 800
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
L ++I Y GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+ +L +A+
Sbjct: 801 LNCSAIVYRDNGKEIYQLEVPIKVK-NIPKSWDQMSATKQVKRYYFPELRGLIRKLQEAQ 859
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K + R +F EH+ W V + L ++
Sbjct: 860 EMHSQIVKEVTGRFYARFDEHYPTWLAAVKIISQLDCLI 898
>gi|341882591|gb|EGT38526.1| hypothetical protein CAEBREN_00497 [Caenorhabditis brenneri]
Length = 1144
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 225/709 (31%), Positives = 359/709 (50%), Gaps = 65/709 (9%)
Query: 282 ERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
ERF D +L P++ RDA +R D YDP+TL++PPDF + + G +QWW KS+
Sbjct: 162 ERFDHESLD---WLKPEKIRDACKRTMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTIKSQ 218
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYR 400
H D +I FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY+
Sbjct: 219 HFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYK 278
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANPD 451
V VEQTETP+ LE R K+ +KDKVV+RE+C V + GT T G L + +P
Sbjct: 279 VARVEQTETPQMLEERNKKTSAKDKVVRREVCRVTSNGTRTYGVLDGVDLGSATSTLDPT 338
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
+ L+A+ ES S +ST +G+C++D T+ I +GQ DD S L LL+ + V+
Sbjct: 339 SKNLLAIKESYNSETGKST---YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQ 395
Query: 512 IIKPANMLSPETERAILRHTRNPL-VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ + +S T +AIL + + +L+P +F A+ V RI
Sbjct: 396 ALVERSSMSAST-KAILNGILFSVPIENLLPKKQFLTADDVV--------RI-------- 438
Query: 571 DSNVANSQAEGDGLTCLPGIL------SELISTGDSGSQV-LSALGGTLFYLKKSFLDET 623
V+N G ++ P +L S ++ S Q+ LSA G +YL+ S +D
Sbjct: 439 ---VSNDDYFGSEVSNWPDVLKTMLEESSVLPKASSEWQLALSAFGAVFWYLRDSLIDVD 495
Query: 624 LLRFAKFELLPCSGFGDMAKKP----------YMVLDAPALENLEVFENSRSGDSSGTLY 673
+L + + ++LD ALENL + N R + +LY
Sbjct: 496 MLSMKNITFYDSNAKSSEVQTSNEEKVDWNGKNLILDGTALENLNIVPNGRDSHLT-SLY 554
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPD 732
+N C T FG+RLLR+WL +P + +R RQ+A+ + + ++ A L ++PD
Sbjct: 555 FVINKCSTPFGRRLLRSWLLQPTCDPTKLRLRQEAIKWMTSSDATSFVDIATATLKKIPD 614
Query: 733 MERLLARL--FASSEANGRNSNKVVLYEDAAK---KQLQEFISALHGCELMDQACSSLGA 787
++RLL ++ + ++ + ++ D K K++ E ++A+ G +L ++
Sbjct: 615 LDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIGELLAAIDGFKLCNKLRKEYMK 674
Query: 788 ILENTESRQ-LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ + E + L +L + + + + F+ FD A G+I+P+ G D +YD A
Sbjct: 675 VQQEGEGCEILDELLGNTEQMEEVDENIMFFEKMFDRTTALKDGKIVPNAGCDEEYDEAL 734
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+KVKE L + K+ SI +V GK YLLE+PES++ V +EL+S +KG
Sbjct: 735 EKVKEAMGELNSY-KDTIAKKYSCSIKFVDSGKVKYLLEMPESIK--VSSSFELKSRRKG 791
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
F RY TP+ ++L+ L AESEK +R+ QF + W + V
Sbjct: 792 FIRYSTPDSEELVASLHAAESEKAKLGDDATRRVFEQFGHKNPIWLETV 840
>gi|320163391|gb|EFW40290.1| mismatch repair protein Msh6 [Capsaspora owczarzaki ATCC 30864]
Length = 1363
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 230/723 (31%), Positives = 349/723 (48%), Gaps = 91/723 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D R P D YDPRTL++PP + +KQ+W K H D V+FFK GKFYE +E
Sbjct: 378 KDGSGRLPTDPAYDPRTLFIPPSAWAKFTPFEKQYWTIKKDHWDTVVFFKKGKFYEFYEK 437
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA + +E DL+ + G PE +F+M K GY+V V++TE+ +R K
Sbjct: 438 DALIAHREFDLKMSDRVNMFMAGVPESSFTMWASKFIALGYKVAKVDETESALSKAMREK 497
Query: 419 ----EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCF 474
+ G K+K+++RE+ +++T+GTL G++L + ++Y++++ E S +
Sbjct: 498 NEKSQPGPKEKIIRRELTSILTRGTLM-GDML-VDELSTYILSIKEDTAS-------HSY 548
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP 534
G+C D T+ L DD + L LL ++RP EI+ N LS T R I P
Sbjct: 549 GLCFADTGTAEFNLCGFQDDPALTTLETLLMQVRPKEIVCERNNLSAATMRLIKNTMSAP 608
Query: 535 LVNDLVPLSEFWDAETTVLEI--KNIYNRITAESLNK-------ADSNVANSQAEGDGLT 585
+N L P EFW+A T+ E+ +N ++ A + K DS+ + +A+
Sbjct: 609 TINPLTPRVEFWEAAATIDELVFENYFSSTPAATGAKQQSSRVPTDSSATSQRAD---TA 665
Query: 586 CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP 645
C P + ++ S V+SALGG + YL+ ++ LL F L + +
Sbjct: 666 CFPQAILDM----QSHPLVISALGGLVHYLRTLCIERELLSQRNFHL-----YDALRHGS 716
Query: 646 YMVLDAPALENLEVF---------------------------------------ENSRSG 666
++LD L+NL+V + + SG
Sbjct: 717 CLLLDGQTLQNLDVLFASSNTLGGGGGASGGSAHDAGSQDSSAGSSSSSSKGGKKQANSG 776
Query: 667 ------DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA 720
S G+L+A LN CV+ FGKRL R WL PL + I +R DAV L ++
Sbjct: 777 ASLTGVSSDGSLHALLNRCVSPFGKRLFRRWLCHPLRHIPEINDRYDAVEDLLRLSN-LT 835
Query: 721 LEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
L +LPD+ER+++R+ A G + L KQLQ + + +L D
Sbjct: 836 GNLTTTLRKLPDLERIVSRIHA-----GSCKLEDFLRAIDGFKQLQSLMQRMPP-QLQDL 889
Query: 781 A-CSSLGAILENTESRQLHHILTPGKG-LPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
+ S G+ E T SR+L LT G+G P + +L AFD A G +IP GV
Sbjct: 890 SRVGSHGSTDEIT-SRRLRRCLTVGEGCFPDLSGLLTELDAAFDQRLAKEQGSLIPFAGV 948
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
D DYD AC+ V+ +E L HL E ++LL D +I Y IG + Y LEVP + VP D+
Sbjct: 949 DEDYDKACEDVRVLETKLQDHLVEVQRLLKDRTIAYRDIGNEKYQLEVPVRI-TDVPGDW 1007
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
+ +SS K R+WTP I+K + L++A +++ L+ L R + +F H KW V
Sbjct: 1008 DFKSSTKAVRRFWTPLIRKTVTPLAEAIETRQAVLREGLARALARFDTHVAKWSAAVRCV 1067
Query: 959 AGL 961
A L
Sbjct: 1068 AEL 1070
>gi|452989141|gb|EME88896.1| hypothetical protein MYCFIDRAFT_25225 [Pseudocercospora fijiensis
CIRAD86]
Length = 1117
Score = 323 bits (827), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 222/708 (31%), Positives = 357/708 (50%), Gaps = 70/708 (9%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
AD++ +L +DA R P YDPRTLY+PP N S +KQ+WE K K D ++FF
Sbjct: 185 ADRYPWLAA-IQDADRHTPDHPDYDPRTLYVPPGAWNNFSPFEKQYWEIKCKFWDTIVFF 243
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKFYEL+E DA +G + DL+ + G PE + + KG+++ V+Q
Sbjct: 244 KKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARVDQM 303
Query: 408 ETPEQLELRRKEKGSKDK-----VVKREICAVVTKGTLTEGELLSANPDASYLMAL--TE 460
ET ++R +++ K V++RE+ +V+T GTL EG +L + A+Y A+ TE
Sbjct: 304 ETALGKDMRERDQKGAAKKKEEKVIRRELASVLTAGTLVEGSMLQDDM-ATYCAAIKETE 362
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
S PA FGI VD AT++ L + +DD D + +++ RP E+I +S
Sbjct: 363 SEGKPA-------FGIAFVDTATAQFHLAEWVDDADMTRFETFVAQTRPGELILEKGCIS 415
Query: 521 PETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
R IL++ P + N L P EF A+ T +++ + +E ADS
Sbjct: 416 ARALR-ILKNNTPPTTIWNYLKPDKEFLSADKTRMKMNGEAYFVKSEDDEAADS------ 468
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
P +L E ++ SA G ++YL ++ L+ A F S +
Sbjct: 469 --------WPKVLRE----AETKENTFSAYGALVWYLSMLKIERDLITCANF-----SWY 511
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ K +VLD +L NLE+F N+ G + GTL+ LN CVT GKR LR W+ PL +
Sbjct: 512 NPIRKASSLVLDGQSLINLEIFANTFDGSTEGTLFTMLNRCVTPSGKRTLRQWVCHPLAD 571
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ I ER DAV L + F +LSRLPD+ERL++R+ A
Sbjct: 572 ARKINERFDAVDALNA-DGTVMDRFTASLSRLPDLERLISRVHA---------------- 614
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
+ ++Q+F+ L G E ++ S L + + L +++ +P + + L H+K
Sbjct: 615 --GRCKVQDFVKVLEGFEQIEYTMSLLSSFGDG--EGLLGQLIS---AMPNLQTPLNHWK 667
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
+AFD +A G +IP GV+ D+D + ++V +E L K L+ RK LG ++I + G
Sbjct: 668 EAFDRKQAKEQGLLIPQPGVEDDFDESQERVDGVEKELNKLLQRARKDLGSSAIKFTDNG 727
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K++Y LEVP ++G++P++++ S+ K R+++P ++ L+ +L +A+ +K++
Sbjct: 728 KEIYQLEVPIKVKGNIPKNWKQMSATKQCKRWYSPELEGLVQDLKEAQEMHAQVVKALAG 787
Query: 939 RLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
R +F E + W + L ++ SL A L S SC E
Sbjct: 788 RFFARFDEDYTTWLAAIKIIGQLDCLI---SLAKASSSLGSPSCRPEF 832
>gi|341900974|gb|EGT56909.1| CBN-MSH-6 protein [Caenorhabditis brenneri]
Length = 1193
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 228/723 (31%), Positives = 360/723 (49%), Gaps = 79/723 (10%)
Query: 282 ERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
ERF D +L P++ RDA +R D YDP+TL++PPDF + + G +QWW KS+
Sbjct: 197 ERFDHESLD---WLKPEKIRDACKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTIKSQ 253
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYR 400
H D +I FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY+
Sbjct: 254 HFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGYK 313
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANPD 451
V VEQTETP+ LE R ++ +KDKVV+RE+C V + GT T G L + +P
Sbjct: 314 VARVEQTETPQMLEERNRKTSAKDKVVRREVCRVTSNGTRTYGVLDGVDLGSATSTLDPT 373
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
+ L+A+ E + S +ST +G+C++D T+ I +GQ DD S L LL+ + V+
Sbjct: 374 SKNLLAIKEFHNSETGKST---YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVVQ 430
Query: 512 IIKPANMLSPETERAILRHTRNPL-VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ N +S T +AIL + + +L+P +F A+ V RI
Sbjct: 431 ALVERNSMSAST-KAILHGILFSVPIENLLPKKQFLTADDVV--------RI-------- 473
Query: 571 DSNVANSQAEGDGLTCLPGIL------SELISTGDSGSQV-LSALGGTLFYLKKSFLDET 623
V+N G ++ P +L S ++ S Q+ LSA G +YL+ S +D
Sbjct: 474 ---VSNDDYFGSEVSNWPDVLKTMLEESSVLPKASSEWQLALSAFGAVFWYLRDSLIDVD 530
Query: 624 LLRFAKFELLPCSGFGDMAKKP----------YMVLDAPALENLEVFENSRSGDSSGTLY 673
+L + + ++LD ALENL + N R + +LY
Sbjct: 531 MLSMKNITFYDSNAKSSEVQTSNEEKVDWNGKNLILDGTALENLNIVPNGRDSHLT-SLY 589
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPD 732
+N C T FG+RLLR+WL +P + +R RQ+A+ + + ++ A L ++PD
Sbjct: 590 FVINKCSTPFGRRLLRSWLLQPTCDPTKLRLRQEAIKWMTSSDATSFVDIATATLKKIPD 649
Query: 733 MERLLARL--FASSEANGRNSNKVVLYEDAAK---KQLQEFISALHGCELMD-------- 779
++RLL ++ + ++ + ++ D K K++ E ++A+ G +L +
Sbjct: 650 LDRLLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIGELLAAIDGFKLCNKLRKEYMK 709
Query: 780 -----QACSSLGAILENTESRQL--HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
+ C L +L NTE + +I+ +F+ FD A G+I
Sbjct: 710 VQQEGEGCEILDELLGNTEQMEEVDENIMFFEVFYTLFFFFAYNFQKMFDRTTALKDGKI 769
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
+P+ G D +YD A +KVKE L + K+ SI +V GK YLLE+PES++
Sbjct: 770 VPNAGCDEEYDEALEKVKEAMGELNSY-KDTIAKKYSCSIKFVDSGKVKYLLEMPESIK- 827
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
V +EL+S +KGF RY TP+ ++L+ L AESEK +R+ QF + W
Sbjct: 828 -VSSSFELKSRRKGFIRYSTPDSEELVASLHAAESEKAKLGDDATRRVFEQFGHKNPIWL 886
Query: 953 QMV 955
+ V
Sbjct: 887 ETV 889
>gi|212543423|ref|XP_002151866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
gi|210066773|gb|EEA20866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
Length = 1197
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 251/845 (29%), Positives = 403/845 (47%), Gaps = 98/845 (11%)
Query: 177 VEDDEEMENVEDEISDDRSDSSDDDWNKNVGKE-DVSEDEEVD-LVDEQENKVLRGRKRK 234
V+DDEE+ + R +D ++ GK+ +SEDE D +VDE E +KRK
Sbjct: 134 VDDDEEIFRPQPSRKRRRPAIESEDEFQDDGKDAHMSEDEMDDFIVDESEEDARPNKKRK 193
Query: 235 SSGVK---KSKSDGNA----VNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSER---- 283
+ + +SKS +ADF I P G +D ER
Sbjct: 194 KAAARPAQRSKSSTEEPVRPADADFDLDI--PEATAGGTAQKWTYDPENTEPRQERQQRE 251
Query: 284 ----FSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQ 331
+ + +K H P++R D + PG YDPR +Y+PP S +
Sbjct: 252 PSSNGTTKRKEKAHETEPEKRYPWLANIMDMDKNPPGHPDYDPRNIYIPPLAWSKFSPFE 311
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMN 390
KQ+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 312 KQYWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHW 371
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEK-----GSKDKVVKREICAVVTKGTLTEGEL 445
+ KGY++ V+Q+E+ E+R ++ G +DK++KRE+ V+T GTL EG +
Sbjct: 372 ANQFVAKGYKIARVDQSESALGKEMRERDDKKAKVGKEDKIIKRELACVLTAGTLVEGSM 431
Query: 446 LSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L + ++Y +A+ E + PA FGI VD AT + L + DD D +
Sbjct: 432 LQDDM-STYCVAIKEIILDGLPA-------FGIAFVDTATGQFYLSEFKDDADMTKFETF 483
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNR 561
+++ RP E++ + +S + R IL++ P L N L P EFW+A+ V E
Sbjct: 484 VAQTRPQELLLEKSAVSQKAMR-ILKNNTGPTTLWNHLKPGKEFWEADIAVRE------- 535
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
L+ +D V+ + D + P +L E +SA G + YL+ LD
Sbjct: 536 -----LDASDYFVS---PDSDNINAWPQVLRE----AREKENAMSAFGALVQYLRVLKLD 583
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
L+ F + + + K +VLD L NLE+F NS G S GTL+ LN C+T
Sbjct: 584 RDLISIGNF-----TWYDPIRKATSLVLDGQTLINLEIFANSFDGGSEGTLFQLLNRCIT 638
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
FGKR+ + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 639 PFGKRMFKQWVCHPLVDIDKINARFDAVDAL-NADSTIRDQFSSQLTKMPDLERLISRIH 697
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
A + G Q+F+ L G E Q ++G + + L L
Sbjct: 698 AGA-CKG-----------------QDFLRVLEGFE---QIEYTMGLLKDLGSGEGLIGKL 736
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
+P +VS L+++K AFD ++A +G ++P G++ D+D++ +++I L LK
Sbjct: 737 V--SSMPDLVSPLEYWKTAFDRLKAKENGILVPEQGIEEDFDASQATIEQIHRDLENLLK 794
Query: 862 EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
+ R+ LG T+I Y GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+ +
Sbjct: 795 QARRDLGSTAICYRDNGKEIYQLEVPIKVK-NIPKTWDQMSATKQVKRYYFPELRALIRK 853
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNS 981
L +A+ +K + R +F E + W + + A L ++ SL A L S
Sbjct: 854 LQEAQETHSQIVKEVAGRFYARFDEDYETWLKSIRIVAQLDCLI---SLAKASSSLGQPS 910
Query: 982 CSSEM 986
C E
Sbjct: 911 CRPEF 915
>gi|407928522|gb|EKG21378.1| hypothetical protein MPH_01370 [Macrophomina phaseolina MS6]
Length = 1185
Score = 322 bits (824), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 215/688 (31%), Positives = 355/688 (51%), Gaps = 63/688 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+DA R G YDPRTLY+PP S +KQ+WE KSK D ++FFK GKFYEL+E
Sbjct: 267 QDADRNPLGHPDYDPRTLYIPPGAWSKFSAFEKQYWEIKSKFWDTIVFFKKGKFYELYEN 326
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA VG + DL+ + G PE + M + KGY++ V+Q E+ E+R +
Sbjct: 327 DATVGHQLFDLKLTDRVNMRMVGVPESSLDMWANQFVAKGYKIAKVDQMESALGKEMRER 386
Query: 419 EKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
+K +K+++RE+ +V+T GTL +G +L + ++Y +A+ E ++ FGI
Sbjct: 387 GGPAKKEEKIIRRELSSVLTGGTLVDGAMLQDDM-STYCVAIKEVDRDNLP-----VFGI 440
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP-- 534
VD AT++ L + DD D + +++ RP E++ + +S + R IL++ +P
Sbjct: 441 AFVDTATAQFQLCEFTDDADMTKFETFVAQTRPGELLLEKSCISAKALR-ILKNNTSPTT 499
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
+ N L P EFW A+T EI+ +D V+ + D + P +L +
Sbjct: 500 IWNYLKPGKEFWSADTAAREIE------------ASDYFVSPDR---DNIEVWPQVLRD- 543
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPAL 654
++ +SA G YL+ +++ L+ F + + + K +VLD +L
Sbjct: 544 --AKENHELAMSAFGALFQYLRMLKIEKDLVTLGNF-----AWYDPIRKATSLVLDGQSL 596
Query: 655 ENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG 714
NLE+F NS G + GTL++ LN C+T FGKR+L+ W+ PL ++ I +R DAV L
Sbjct: 597 INLEIFANSFDGGTDGTLFSMLNRCITPFGKRMLKQWVCHPLADARKINQRLDAVDALNA 656
Query: 715 VNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG 774
+ F +LS+LPD+ERLL+R+ A + + Q+F+ L G
Sbjct: 657 -DTTVMDRFTASLSKLPDLERLLSRVH------------------AGRIKAQDFVKVLEG 697
Query: 775 CELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIP 834
E ++ S L E + +++ +P + LKH++DAFD +A G ++P
Sbjct: 698 FEQIEYTMSLLSEFGEG--EGVIGQLIS---QMPDLAGSLKHWRDAFDRKKAKEDGILVP 752
Query: 835 HGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSV 894
GV+ D+D + + V+ + A L K LK+ R+ LG T+I Y GK++Y LEVP ++ +V
Sbjct: 753 EPGVEEDFDQSQENVESVLAELEKLLKQYRRDLGSTAICYKDNGKEIYQLEVPIKIK-NV 811
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P+ ++ SS RY++P +++L+ +L +A+ +K + R +F E ++ W
Sbjct: 812 PKSWDQMSSTAKVKRYYSPELRRLVRKLQEAQETHGQIVKEVAGRFYARFDEGYSVWLAA 871
Query: 955 VAATAGLTLILLDGSLLHAFLILQSNSC 982
V + L ++ SL A L SC
Sbjct: 872 VKIISQLDCLI---SLAKASASLGEPSC 896
>gi|242786643|ref|XP_002480846.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218720993|gb|EED20412.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1183
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 223/725 (30%), Positives = 357/725 (49%), Gaps = 96/725 (13%)
Query: 285 SAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
+ + +K H P++R D R PG YDPR +Y+PP S +KQ+WE
Sbjct: 242 TTKRKEKAHETEPEKRYPWLANIMDMDRNPPGHPDYDPRNIYIPPLAWTKFSPFEKQYWE 301
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLA 395
K K D ++FFK GKFYEL+E DA +G + DL+ + G PE + +
Sbjct: 302 IKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFV 361
Query: 396 RKGYRVLVVEQTETPEQLELRRKE-----KGSK-DKVVKREICAVVTKGTLTEGELLSAN 449
KGY++ V+Q+E+ E+R ++ KGSK DK++KRE+ V+T GTL EG +L +
Sbjct: 362 AKGYKIARVDQSESALGKEMRERDDKKSAKGSKEDKIIKRELSCVLTAGTLVEGSMLQDD 421
Query: 450 PDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
++Y +A+ E + PA FGI VD AT + L + DD D + +++
Sbjct: 422 M-STYCVAIKEIILDGLPA-------FGIAFVDTATGQFYLSEFKDDADMTKFETFIAQT 473
Query: 508 RPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
RP E++ + +S + R IL++ P L N L P EFW+A+ + E
Sbjct: 474 RPQELLLEKSAVSQKAMR-ILKNNTGPTTLWNHLKPGKEFWEADIAIRE----------- 521
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
L+ +D V+ E D + P +L E +SA G + YL+ LD L+
Sbjct: 522 -LDASDYFVSQ---ESDNIDAWPQVLRE----AREKENAMSAFGALVQYLRVLKLDRDLI 573
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F + + + K +VLD L NLE+F NS G S GTL+ LN C+T FGK
Sbjct: 574 SIGNF-----TWYDPIRKATSLVLDGQTLINLEIFANSFDGGSEGTLFQLLNRCITPFGK 628
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R+ + W+ PL + I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 629 RMFKQWVCHPLMDIDKINARFDAVDAL-NADSTIRDQFSSQLTKMPDLERLISRIHAGA- 686
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
+ Q+F+ L G E ++ S L L G+
Sbjct: 687 -----------------CKAQDFLRVLEGFEQIEYTMSLLND-------------LGSGE 716
Query: 806 GL--------PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
GL P +VS L+++K AFD ++A +G ++P G++ D+D++ +++I L
Sbjct: 717 GLIGKLVSSMPDLVSPLEYWKTAFDRLKAKENGILVPEQGIEEDFDASQATIEQIHRDLE 776
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
LK+ R+ LG T+I Y GK++Y LEVP ++ +VP+ ++ S+ K RY+ P ++
Sbjct: 777 NLLKKSRRELGSTAICYRDNGKEIYQLEVPIKVK-NVPKSWDQMSATKQVKRYYFPELRA 835
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLIL 977
L+ +L +A+ +K + R +F E++ W + + A L ++ SL A L
Sbjct: 836 LVRKLQEAQESHSQIVKEVAGRFYARFDENYETWLKSIRIVAQLDCLI---SLAKASSSL 892
Query: 978 QSNSC 982
SC
Sbjct: 893 GEPSC 897
>gi|358366152|dbj|GAA82773.1| DNA mismatch repair protein Msh6 [Aspergillus kawachii IFO 4308]
Length = 1210
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 247/816 (30%), Positives = 397/816 (48%), Gaps = 89/816 (10%)
Query: 195 SDSSDDDWNKNVGKEDVSEDEEVDLV----DEQENKVLRGRKRKSSGVKKSKSDGNAVNA 250
S SDD++N G S+DE D + ++E K + RKR S+ K S V+
Sbjct: 164 SPESDDEFNDG-GDVGYSDDEMDDFIVADDSDEEAKPSKKRKRPSTQPKSKSSSLPPVSP 222
Query: 251 DFKSPIIKPVKIFGS------DKLSNGFDNPVMGDVS-ERFSAREADKFHFLGPDRR--- 300
D + P G+ D S+ P V+ ++ S K H P++R
Sbjct: 223 DEDLDLDIPDASAGTALKWTYDPESSEPRQPRTAPVTPKKSSGATKQKAHVTEPEQRYAW 282
Query: 301 -----DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYE 355
D G YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYE
Sbjct: 283 LANIRDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYE 342
Query: 356 LFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
L+E DA +G + DL+ + G PE + + KG+++ V+Q E+ E
Sbjct: 343 LYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKE 402
Query: 415 LRRK----EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQ 468
+R + G +DKV++RE+ +V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 403 MRERDGKKGGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEALIDDKPA-- 459
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL
Sbjct: 460 -----FGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKAMR-IL 513
Query: 529 RHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
++ P L N L P+ EFW+A+ TV E+ D++ + D L
Sbjct: 514 KNNTGPTTLWNHLKPVKEFWEADITVKEL---------------DASEYFVSQDDDNLQA 558
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P L E V+SA G + YL+ +D L+ F + + + K
Sbjct: 559 WPEALRE----ARDKELVMSAFGALVQYLRLLKIDRDLITIGNF-----TAYDPIKKATS 609
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+VLD L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R
Sbjct: 610 LVLDGQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARL 669
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
DAV L + +F L+++PD+ERL++R+ AA + Q
Sbjct: 670 DAVDALNA-DPTVRDQFSSQLTKMPDLERLISRVH------------------AANCKAQ 710
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEA 826
+F+ L G E ++ S +L+ + S I G+P + +L+++K AFD +A
Sbjct: 711 DFLRVLEGFEQIEYTMS----LLKESGSAGEGVIGQLISGMPDLNDLLEYWKTAFDRSKA 766
Query: 827 NNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
+G ++P GV+ D+DS+ + +++I L LK RK LG ++I Y GK++Y LEV
Sbjct: 767 RENGILVPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKEIYQLEV 826
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P ++ ++P++++ S+ K RY+ P ++KL+ +L +A+ +K + R +F E
Sbjct: 827 PIKVK-NIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAGRFYARFDE 885
Query: 947 HHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
++ W V A L ++ SL A L SC
Sbjct: 886 NYTTWLAAVRIVAQLDCLI---SLAKASSSLGQPSC 918
>gi|330923791|ref|XP_003300375.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
gi|311325500|gb|EFQ91520.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
Length = 1214
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 225/718 (31%), Positives = 355/718 (49%), Gaps = 77/718 (10%)
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ ER SA E + H ++DA R YDPRTLY+PP LS +KQ+WE KS
Sbjct: 272 IKERPSASEPETRHPWLAHQQDADRHPIDHPDYDPRTLYVPPHAFDKLSAFEKQYWEIKS 331
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
K D V+FFK GKFYEL+E DA +G + DL+ + G PE + M + G
Sbjct: 332 KWWDTVVFFKKGKFYELYEKDATIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAG 391
Query: 399 YRVLVVEQTETPEQLELRRKEK----------GSKDKVVKREICAVVTKGTLTEGELLSA 448
Y+V V+Q E+ E+R ++ G ++KV++RE+ V+T GTL + +L +
Sbjct: 392 YKVARVDQMESALGKEMRERDDKGKTPKKAAGGKENKVIRRELATVLTSGTLVDTGMLQS 451
Query: 449 NPDASYLMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
++Y MA+ E ++ PA FG+ VD AT++ L + DD+D + L+++
Sbjct: 452 EM-STYCMAIKEIDRDNLPA-------FGVAFVDTATAQFQLCEFTDDVDMTKFETLIAQ 503
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+RP E++ + +S + R IL++ P + N L P EFW A+ + E++
Sbjct: 504 MRPGELLLEKSCVSAKVLR-ILKNNTPPTTIWNWLKPNKEFWPADIAIRELEA------- 555
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+N S E D + P +L E V+SA G L YL+ ++ L
Sbjct: 556 -------NNYFESPTE-DNIEAWPAVLRE----AREQELVMSAFGALLQYLRTLMIERDL 603
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ F+ + + K +VLD +L NLE+F N+ G + GTL+A LN C+T FG
Sbjct: 604 VTLGNFQW-----YDPIRKATSLVLDGQSLINLEIFANTFDGSTEGTLFAMLNRCITPFG 658
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
KRLLR W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+
Sbjct: 659 KRLLRQWVCHPLADAAKINARLDAVDALNA-DSTIMDNFSSSLSKLPDLERLISRVH--- 714
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A + + Q+F+ L G E ++ S L N E I
Sbjct: 715 ---------------AGRCRAQDFLKVLEGFEQIEYTISLLKQ-FGNGEGVIGQLI---- 754
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
+P + + L + AFD A G +IP G++ D+D++ ++V+ +A L LK+ R
Sbjct: 755 SSMPDLATALAKWTSAFDRNIARKEGLLIPEPGIEEDFDNSQERVEACKADLDVLLKKAR 814
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
K LG ++ Y IGK++Y LEVP+ ++ VP+ ++ S+ RY++P ++KL+ L +
Sbjct: 815 KELGSNAVQYNDIGKEIYQLEVPKKVK--VPKSWDQMSATAKVTRYYSPELRKLVRALQE 872
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
A+ + + R +F E + W V A L ++ SL A L SC
Sbjct: 873 AQETHGQITREVATRFCQRFDEDYKVWLAAVKIIAQLDCLI---SLAKASASLGEPSC 927
>gi|451852581|gb|EMD65876.1| hypothetical protein COCSADRAFT_198733 [Cochliobolus sativus
ND90Pr]
Length = 1213
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 226/713 (31%), Positives = 353/713 (49%), Gaps = 78/713 (10%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
SA E + + + +DA R P YDPRTL++PP R S +KQ+WE KSK D
Sbjct: 277 SASEPEARYPWLANMQDADRHPPDHPDYDPRTLFIPPAAWREFSPFEKQYWEIKSKWWDT 336
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++FFK GKFYEL+E DA +G + DL+ + G PE + M + GY+V
Sbjct: 337 IVFFKKGKFYELYEKDASIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAGYKVAR 396
Query: 404 VEQTETPEQLELR-RKEKGSKDK--------VVKREICAVVTKGTLTEGELLSANPDASY 454
V+Q E+ E+R R +KG K V++RE+ V+T GTL + +L + ++Y
Sbjct: 397 VDQMESALGKEMRERDDKGKTPKKAEKKGKEVIRRELATVLTSGTLVDTGMLQSEM-STY 455
Query: 455 LMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEI 512
MA+ E ++ PA FGI VD AT++ L + DD+D + L++++RP E+
Sbjct: 456 CMAIKEIDRDNLPA-------FGIAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPGEL 508
Query: 513 IKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIK-NIYNRITAESLNK 569
+ + +S + R IL++ P + N L EFW A+ T+ EI+ N Y + E
Sbjct: 509 LLEKSCVSAKALR-ILKNNTGPTTIWNWLKLNKEFWPADITIREIEVNKYFELPTE---- 563
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D + P +L E V+SA G L YL+ ++ L+
Sbjct: 564 ------------DNIEAWPPVLRE----AREKELVMSAFGALLQYLRTLMIERDLVTLGN 607
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F+ + + K +VLD +L NLE+F N+ G + GTL+A LN C+T FGKRLLR
Sbjct: 608 FQW-----YDPIRKATSLVLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRLLR 662
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+
Sbjct: 663 QWVCHPLADAQKINARLDAVDALNK-DSAIMENFSGSLSKLPDLERLISRVH-------- 713
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
A + + Q+F+ L G E ++ S L E + +++ +P
Sbjct: 714 ----------AGRCKAQDFLKVLEGFEQIEYTISLLKQFSEG--EGVIGQLIS---SMPD 758
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ + L+ +K AFD A G +IP GV+ DYD++ ++ EA+L LK+ RK G
Sbjct: 759 LAACLEKWKSAFDREAARKDGILIPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKEQGS 818
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
+I Y +GK++Y LEVP+ ++ VP ++ S+ RY+TP ++KL+ L +A+
Sbjct: 819 NAIIYNHLGKEIYQLEVPKKVK--VPNSWDQMSATAKVTRYYTPELRKLVRALQEAQETH 876
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ + R +F E + W V A L ++ SL A L SC
Sbjct: 877 GQITREVATRFCQRFDEDYKTWLAAVKIIAQLDCLI---SLAKASASLGEPSC 926
>gi|451997168|gb|EMD89633.1| hypothetical protein COCHEDRAFT_1194981 [Cochliobolus
heterostrophus C5]
Length = 1213
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 226/712 (31%), Positives = 354/712 (49%), Gaps = 76/712 (10%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
SA E + + + +DA R P YDPRTL++PP R+ S +KQ+WE KSK D
Sbjct: 277 SASEPEARYPWLANMQDADRHPPDHPDYDPRTLFIPPAAWRDFSPFEKQYWEIKSKWWDT 336
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++FFK GKFYEL+E DA +G + DL+ + G PE + M + GY+V
Sbjct: 337 IVFFKKGKFYELYEKDASIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAGYKVAR 396
Query: 404 VEQTETPEQLELR-RKEKGSKDK--------VVKREICAVVTKGTLTEGELLSANPDASY 454
V+Q E+ E+R R +KG K V++RE+ V+T GTL + +L + ++Y
Sbjct: 397 VDQMESALGKEMRERDDKGKTPKKAEKKGKEVIRRELATVLTSGTLVDTGMLQSEM-STY 455
Query: 455 LMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEI 512
MA+ E ++ PA FGI VD AT++ L + DD+D + L++++RP E+
Sbjct: 456 CMAIKEIDRDNLPA-------FGIAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPGEL 508
Query: 513 IKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ + +S + R IL++ P + N L EFW A+ T+ EI+
Sbjct: 509 LLEKSCVSAKALR-ILKNNTGPTTIWNWLKLNKEFWPADITIREIEA------------- 554
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+N S E D + P +L E V+SA G L YL+ ++ L+ F
Sbjct: 555 -NNYFESPTE-DNIEAWPAVLRE----AREKELVMSAFGALLQYLRTLMIERDLVTLGNF 608
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + + K +VLD +L NLE+F N+ G + GTL+A LN C+T FGKRLLR
Sbjct: 609 QW-----YDPIRKATSLVLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRLLRQ 663
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+
Sbjct: 664 WVCHPLADAQKINARLDAVDALNK-DSAIMENFSGSLSKLPDLERLISRVH--------- 713
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
A + + Q+F+ L G E ++ S L E + +++ +P +
Sbjct: 714 ---------AGRCKAQDFLKVLEGFEQIEYTISLLKQFSEG--EGVIGQLIS---SMPDL 759
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
+ L+ +K AFD A G +IP GV+ DYD++ ++ EA+L LK+ RK G
Sbjct: 760 AACLEKWKSAFDREAARKDGILIPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKEQGSN 819
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
+I Y +GK++Y LEVP+ ++ VP ++ S+ RY+TP ++KL+ L +A+
Sbjct: 820 AIIYNHLGKEIYQLEVPKKVK--VPNSWDQMSATAKVTRYYTPELRKLVRALQEAQETHG 877
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ + R +F E + W V A L ++ SL A L SC
Sbjct: 878 QITREVATRFCQRFDEDYKIWLAAVKIIAQLDCLI---SLAKASASLGEPSC 926
>gi|189201826|ref|XP_001937249.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984348|gb|EDU49836.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1192
Score = 319 bits (817), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 222/720 (30%), Positives = 355/720 (49%), Gaps = 81/720 (11%)
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ ER SA E + H ++DA R YDPRTLY+PP LS +KQ+WE KS
Sbjct: 250 IKERPSASEPETRHPWLAHQQDADRHPIDHPDYDPRTLYVPPHAFEKLSAFEKQYWEIKS 309
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
K D V+FFK GKFYEL+E DA +G + DL+ + G PE + M + G
Sbjct: 310 KWWDTVVFFKKGKFYELYEKDATIGHQLFDLKLTDRVNMRMVGVPEASLDMWATQFVAAG 369
Query: 399 YRVLVVEQTETPEQLELRRKEK----------GSKDKVVKREICAVVTKGTLTEGELLSA 448
Y+V V+Q E+ E+R ++ G ++KV++RE+ V+T GTL + +L +
Sbjct: 370 YKVARVDQMESALGKEMRERDDKGKTPKKAAGGKENKVIRRELATVLTSGTLVDTGMLQS 429
Query: 449 NPDASYLMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
++Y MA+ E ++ PA FG+ VD AT++ L + DD+D + L+++
Sbjct: 430 EM-STYCMAIKEIDRDNLPA-------FGVAFVDTATAQFQLCEFTDDVDMTKFETLIAQ 481
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTV--LEIKNIYNRI 562
+RP E++ + +S + R IL++ P + N L P EFW A+ + LE+ N +
Sbjct: 482 MRPGELLLEKSCVSAKVLR-ILKNNTPPTTIWNWLKPNKEFWPADIAIRELEVNNYFESP 540
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
T D + P +L E V+SA G L YL+ ++
Sbjct: 541 TE-----------------DNIEAWPAVLRE----AREQELVMSAFGALLQYLRTLMIER 579
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
L+ F+ + + K +VLD +L NLE+F N+ G + GTL+A LN C+T
Sbjct: 580 DLVTLGNFQW-----YDPIRKATSLVLDGQSLINLEIFANTFDGSAEGTLFAMLNRCITP 634
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
FGKRLLR W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+
Sbjct: 635 FGKRLLRQWVCHPLADAAKINARLDAVDALNA-DSSIMDNFSSSLSKLPDLERLISRVH- 692
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
A + + Q+F+ L G E ++ S L + + +++
Sbjct: 693 -----------------AGRCRAQDFLKVLEGFEQIEYTISLLKQFGDG--EGVIGQLIS 733
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+P + + L + AFD A G +IP G++ D+D++ ++V+ +A L LK+
Sbjct: 734 ---SMPDLGTSLAKWTSAFDRNIARKEGLLIPEPGIEEDFDNSQERVEACKADLDVLLKK 790
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
RK LG ++ Y IGK++Y LEVP+ ++ VP ++ S+ RY++P ++KL+ L
Sbjct: 791 ARKELGSNAVQYNDIGKEIYQLEVPKKVK--VPNSWDQMSATAKVTRYYSPELRKLVRAL 848
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+A+ + + R +F E + W V A L ++ SL A L SC
Sbjct: 849 QEAQETHGQITREVATRFCQRFDEDYKVWLAAVKIIAQLDCLI---SLAKASASLGEPSC 905
Score = 41.2 bits (95), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%)
Query: 2 APGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTP 61
A K+Q S Q+ I FF K ++ SPSP S P + P + + T
Sbjct: 15 ASQKKQPASASQSAKGQKSILGFFQKKSTNSPSPAPSDATPTQKTPKPTIANKAFTKSTA 74
Query: 62 SPSPSPTTPSPLQSNPKK 79
S +P P++ +P S+P K
Sbjct: 75 STTPVPSSDAPDYSSPIK 92
>gi|406605450|emb|CCH43094.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 1254
Score = 318 bits (816), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 228/696 (32%), Positives = 347/696 (49%), Gaps = 67/696 (9%)
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
S++F+ +++ +L D RDA R D YDPRTLY+P + +KQ+WE KSK
Sbjct: 300 SQKFTKENEERYQWL-IDIRDADRNSITDPQYDPRTLYIPSSAWAKFTNFEKQYWEIKSK 358
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARK 397
D ++FFK GKFYEL+E DA + E DL+ G + + G PE +F K
Sbjct: 359 MWDCIVFFKKGKFYELYEKDAMIAHNEFDLKIAGGGRANMQLAGIPEMSFDFWATSFITK 418
Query: 398 GYRVLVVEQTETPEQLELRRKE----KGSKDKVVKREICAVVTKGTLTEGELLSANPDAS 453
GY+V V+Q ET E+R KG KD V++RE+ V+T GTLT+ +LS + A+
Sbjct: 419 GYKVAKVDQIETGLAKEIRESNGQAPKGKKD-VIQRELKCVLTAGTLTDESMLSDDM-AT 476
Query: 454 YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
Y +A+ E + P +++ + FG+ +D AT +I L + DD +C+ L L S+LRP E+I
Sbjct: 477 YCIAVKE-DVDPENEN-GKVFGVAFIDTATGQIQLTEFKDDSECTKLETLASQLRPKELI 534
Query: 514 KPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS 572
N LS R + N + N + SEF+D +TT E AESL
Sbjct: 535 ISKNNLSQLALRILKFNSQNNAIFNYIKSESEFYDFDTT-FETLTRGKYFPAESL----- 588
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
D L+ P L E T SA GG L+YL+ LDE+L+
Sbjct: 589 ---------DDLSNWPKTLKEFYETQKFVG--FSAFGGLLWYLQSLKLDESLVSIGN--- 634
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
S + + +VLD L+NLE+F NS G GTL+ +N T FGKRLL+TW+
Sbjct: 635 --ISPYTTIKPSTNLVLDGQTLQNLEIFANSFDGTEKGTLFKLINRATTPFGKRLLKTWV 692
Query: 693 ARPLYNSGLIRERQDAVAG-LRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
PL I R D+V L + +EF +L +LPD+ERLL+R+ AS +
Sbjct: 693 VHPLLQQTDIDARLDSVDQLLEDGDLRSTIEF--SLVKLPDLERLLSRVHASQLKLKDFT 750
Query: 752 NKVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+ +ED AK K+LQ F + SLG I K
Sbjct: 751 RVIEGFEDIAKLYKKLQNF-----------EMKGSLGKIY--------------SKFPNE 785
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
I L + DAFD V+A + G +I G++ DYD + +K++E L +K+ R+
Sbjct: 786 IQDSLSKWDDAFDRVKAKDEGVLILSKGIEQDYDDSVSTIKDLEHELEATIKQYRRTFKT 845
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
I Y GK+LY +E+P R +VP+D++ + K RYW+P ++ + ++++A+
Sbjct: 846 QEINYKDSGKELYTIEMPS--RITVPKDWKRMGASKKTTRYWSPEVETMAKDIARAKECH 903
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ +S++ R+ +F ++ W + A A + ++
Sbjct: 904 KLIEESLITRMFKRFDTDYSVWSSAINAIAKIDCLV 939
>gi|268564536|ref|XP_002639138.1| C. briggsae CBR-MSH-6 protein [Caenorhabditis briggsae]
Length = 1185
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 219/702 (31%), Positives = 350/702 (49%), Gaps = 49/702 (6%)
Query: 281 SERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ERF D +L PD+ RDA +R D YDP+TL++PPDF + G +QWW KS
Sbjct: 202 TERFDHESLD---WLKPDKIRDASKRAMSDPEYDPKTLWVPPDFHLKQTPGHRQWWTIKS 258
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+H D +I FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY
Sbjct: 259 QHFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGY 318
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANP 450
+V VEQTETP+ LE R ++ SKDKVV+RE+C V + GT T G L + +P
Sbjct: 319 KVARVEQTETPQMLEERNQKAKSKDKVVRREVCRVTSNGTRTYGVLDGVDLGSATSTLDP 378
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A +L+A+ E + + +ST +G+C++D T+ I +GQ DD S L L + + V
Sbjct: 379 TAKHLLAIKEFHNTETGKST---YGVCMIDTTTAHIRVGQFEDDDYRSQLRTLFANVIVV 435
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ + + +S T+ I + + L+P +F AE V L+K
Sbjct: 436 QTLVERSSMSVSTKSIINGILFSVPIEHLLPKKQFLTAEDCV------------RDLSKD 483
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
D + D L + S L SA G ++YL+ S +D ++
Sbjct: 484 DYFGSEVSGWPDVLKLMLDDSSVLPKPSSKWQLAFSAFGAIVWYLRDSLIDVDMISMRNI 543
Query: 631 ELLPCSGFGDMA----------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L + K +++LD LENL + N R + +LY LN C
Sbjct: 544 TLYDSNNSKPEKINQEDDKVDWKGKHLILDGTVLENLNIVPNGRDSHLT-SLYYVLNKCS 602
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALSRLPDMERLLAR 739
T FG+RLLR+WL +P + +R RQ+A+ + + + F L ++PD++RLL +
Sbjct: 603 TPFGRRLLRSWLLQPTCDPATLRLRQEAIKWMISSDAESFFSTAIATLKKIPDLDRLLQK 662
Query: 740 L--FASSEANGRNSNKVVLYEDAAK---KQLQEFISALHGCELMDQACSSLGAILENTES 794
+ + ++ + ++ D K K++ E ++A+ G +L ++ + + E
Sbjct: 663 IHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIGELLAAIDGFKLCNKLRKEYQTVQQEGEG 722
Query: 795 RQ-LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+ L +L + + + + +F+ FD A G+I+P+ G D +YD A KVKE
Sbjct: 723 CELLDELLGNEQQVEEVDENIFYFEKMFDRTTALKDGKIVPNAGCDDEYDQATAKVKEAL 782
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ L + K++ SI +V GK YLLE+PE+ + V D+EL+S +KGF RY TP
Sbjct: 783 SELNAY-KDKIAKKYSCSIKFVDSGKVKYLLEMPENTK--VSSDFELKSRRKGFIRYSTP 839
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ ++L+ L AE EK +R+ QF + W + V
Sbjct: 840 DSEELVAFLDIAEKEKSKLGDDATRRVFEQFGHKNPIWLETV 881
>gi|452846757|gb|EME48689.1| hypothetical protein DOTSEDRAFT_141977 [Dothistroma septosporum
NZE10]
Length = 1041
Score = 318 bits (815), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 218/702 (31%), Positives = 350/702 (49%), Gaps = 62/702 (8%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+D++ +L +DA R P YD RT+Y+PP N S +KQ+WE K K D ++FF
Sbjct: 112 SDRYPWLA-SIQDADRNPPDHPDYDKRTIYIPPMAWNNFSPFEKQYWEIKQKFWDTIVFF 170
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKFYEL+E DA +G + DL+ + G PE + KGY++ V+Q
Sbjct: 171 KKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANMFVAKGYKIARVDQM 230
Query: 408 ETPEQLELR-RKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
E+ ++R R KG K+ KV++RE+ +V+T GTL EG +L + A+Y A+ ES
Sbjct: 231 ESALGKDMRERNIKGKKEEKVIRRELASVLTSGTLVEGSMLQDDM-ATYCAAIKESELDG 289
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
FGI VD AT++ L ++ DD D + +++ RP EI+ +S + R
Sbjct: 290 KPH-----FGIAFVDTATAQFQLTEIHDDADMTKFETFVAQTRPGEILLEKGCVSAKALR 344
Query: 526 AILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ +T + N L P EF A+ T ++I D + D
Sbjct: 345 MLKNNTPPTTIWNHLKPDKEFLSADKTRMKI---------------DGEAYFDKCVEDNH 389
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
+ P +L E + V SALGG ++YL ++ L+ F + + + K
Sbjct: 390 SAWPSVLQE----AKNKEIVFSALGGLIWYLGTLKIERDLVTLGNF-----AWYDPIRKA 440
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
+VLD +L NLE+F N+ G + GTL+ LN CVT FGKR+LR W+ PL ++ I +
Sbjct: 441 SSLVLDGQSLINLEIFANTFDGSTEGTLFTMLNRCVTPFGKRMLRQWVCHPLADARKINQ 500
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
R DA+ L + F +LS+LPD+ERL++R+ A + +
Sbjct: 501 RFDAIEALNA-DGTVMDRFCASLSKLPDLERLISRVHA------------------GRCR 541
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
Q+F+ L G E ++ S LGA + L +++ +P + LKH+KDAFD
Sbjct: 542 AQDFVKVLEGFEQIEYTMSLLGAF--GSGEGLLGQLIS---SMPDLDGALKHWKDAFDRT 596
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
+A G IP GV+ D+D + +++ I L K L++ RK LG ++I + GK++Y L
Sbjct: 597 KAKEDGLFIPQPGVEEDFDESQERIDGIGKELQKLLQKARKDLGSSTIKFTDNGKEIYQL 656
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EVP ++G++P+ ++ S+ K R++ P ++ L+ +L +A+ +K++ R +F
Sbjct: 657 EVPLKVQGNIPKHWKQMSATKQVKRWYFPELEGLVQDLKEAQEMHGQVIKALAGRFFARF 716
Query: 945 CEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ W A L ++ SL A + S SC E
Sbjct: 717 DLDYAIWLAAAKIVAQLDCLI---SLAKASASMGSPSCRPEF 755
>gi|425779081|gb|EKV17171.1| DNA mismatch repair protein Msh6, putative [Penicillium digitatum
PHI26]
Length = 1222
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 209/680 (30%), Positives = 348/680 (51%), Gaps = 69/680 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 311 YDPRTVYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 370
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK----DKV 426
+ G PE + + KG+++ V+Q+E+ E+R +E G K DK+
Sbjct: 371 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERE-GKKPTKEDKI 429
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
+KRE+ V+T GTL EG +L + ++Y +A+ E A FGI VD AT +
Sbjct: 430 IKRELACVLTAGTLVEGSMLQDDM-STYCVAIKE-----AIVDEHHAFGIAFVDTATGQF 483
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSE 544
L + +DD+D + +++ RP E++ + +S + R IL++ P + N + P E
Sbjct: 484 FLSEFVDDVDMTKFETFVAQTRPRELLLEKSCVSQKAMR-ILKNNTGPTTIWNFMKPGKE 542
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
FW++E T+ E++ +E AD D LT P E + +
Sbjct: 543 FWESEITIRELE------ASEYFVSADD---------DNLTAWP----ETLRQAREKEFL 583
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
+SA G + YL+ ++ L+ F + + + K +VLD L N+E+F NS
Sbjct: 584 MSAFGALVQYLRMLKIERDLITIGNF-----TWYDPIKKATSLVLDGQTLINMEIFANSF 638
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EF 723
G S GTL+ LN C+T FGKR+ + W+ PL +S I R DAV L P A +F
Sbjct: 639 DGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAVDSLNA--DPSARDQF 696
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
L+++PD+ERL++R+ A + + Q+F+ L G E +D
Sbjct: 697 SSRLTKMPDLERLISRIHAGN------------------CKAQDFVRVLEGFEQIDY--- 735
Query: 784 SLGAILENTESRQLHHILTP-GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
+ +L+ +E+ I+ +P + S+L ++K AFD +A +G ++P GV+ D+
Sbjct: 736 -IMGLLKESETGSGESIIGQLTAAMPDLASLLGYWKTAFDRPKAKENGILVPESGVEEDF 794
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D++ + ++++ L LK+ R+ LG ++I Y GK++Y LEVP ++ ++P+D+ S
Sbjct: 795 DNSQEIIEQLHRDLDAMLKKARQDLGSSAICYRDNGKEIYQLEVPIKVK-NIPKDWNQMS 853
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLT 962
+ K RY+ P ++ L+ +L +A+ +K + R +F EH++ W V + L
Sbjct: 854 ATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFHARFDEHYDTWLAAVRIVSQLD 913
Query: 963 LILLDGSLLHAFLILQSNSC 982
++ SL A + SC
Sbjct: 914 CLI---SLAKASGAIGHPSC 930
>gi|390334252|ref|XP_797647.3| PREDICTED: DNA mismatch repair protein Msh6-like [Strongylocentrotus
purpuratus]
Length = 1462
Score = 316 bits (810), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 232/755 (30%), Positives = 365/755 (48%), Gaps = 101/755 (13%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D K R D YD TL++P F+ + +QWWE KSK+ + V+FFKMGKFYEL+
Sbjct: 416 RKDIKGRPEQDPEYDSSTLFVPKSFMDKTTPAMRQWWEMKSKYYNAVLFFKMGKFYELYH 475
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
MDA V KEL L +MKGE HCGFPE FS E L +KGYR+ VEQTETP+ ++ R K
Sbjct: 476 MDAEVAVKELGLIFMKGENAHCGFPEIAFSRYSETLIQKGYRIARVEQTETPDMMQERVK 535
Query: 419 EKGSK----DKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQST 470
DKVVKREIC + T+ T T +G+ A +SYL+A+TE S
Sbjct: 536 HLSRAVTKFDKVVKREICRISTQATRTFSFIDGDTCEAQ--SSYLLAVTE-RPCEGSSGG 592
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+ +G+C+V+ + + +GQ DD S L++ P +++ L P+T++ + +
Sbjct: 593 ESVYGVCIVETSIGKFYIGQFQDDRHSSRFRTLIAHYPPAQVLFERGKLLPKTQQLLSNN 652
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
+ L + L+P SEFWDA T +K + + E ++ D + + +G GL+C P
Sbjct: 653 LVSVLKDSLLPGSEFWDASKT---LKALMEKGYFED-SERDKDGQENGGKG-GLSCWPDE 707
Query: 591 LSELISTGDS-------GSQV-LSALGGTLFYLKKSFLDETLLRFAKFELL--------- 633
L E++S DS G ++ LSALG +YLKK L++ LL FE+
Sbjct: 708 LKEMLSDADSLGLTPKDGCEMALSALGACTWYLKKCCLEQELLSMRNFEVYKPLDVEASK 767
Query: 634 PCSGFGDMAKKPYMVLDA--------------------PALENL--------EVFENSRS 665
P S K +MV D P LE L NS
Sbjct: 768 PSSPLPSFTSKQHMVRDVLDLHSNPDIVAEVVELIKKLPDLERLLSKIHTLGSSKRNSDH 827
Query: 666 GDSSGTLYA-------QLNHCVTAF-----GKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
DS + +++ +TA G ++++ + ++ +E+ A+ +
Sbjct: 828 PDSRAIFFEDAVYSKRKISDFLTALDGFESGLKIVKLFKKSTAFDQKKAKEK-GAIIPCK 886
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA------------ 761
GV E+ A+S + D + L + + Y++A
Sbjct: 887 GV----IPEYDNAISDIADTKDRLQEYLDKQKKRLGCRGVIPEYDNAIYDMADTKDRHLM 942
Query: 762 -----KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL----TPGKG-LPAIV 811
K+++ +F++AL G E + + + +S L + T +G P
Sbjct: 943 GVIPDKRKISDFLTALDGFESGLKIVKLFKKSVPDFKSSLLKACISLKSTGCRGKYPDYA 1002
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
L+ F+ AFD +A G IIP GV +YD+A + + + L ++L +Q+K LG +
Sbjct: 1003 DTLEFFETAFDQKKAKEKGAIIPCKGVIPEYDNAISDIADTKDRLQEYLDKQKKRLGCRN 1062
Query: 872 ITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I Y K+ + +E+PES L +P +YEL SSKKGF RYW+P I+ LL + AE ++
Sbjct: 1063 IVYWGTAKNRFQMEIPESALSRHIPEEYELTSSKKGFKRYWSPTIQNLLADTMNAEDRRD 1122
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ALK ++R+ +F EH+ W + + L +++
Sbjct: 1123 AALKDSMRRVFHKFDEHYKSWDAAIQCLSVLDVLM 1157
>gi|121707076|ref|XP_001271724.1| DNA mismatch repair protein Msh6, putative [Aspergillus clavatus
NRRL 1]
gi|119399872|gb|EAW10298.1| DNA mismatch repair protein Msh6, putative [Aspergillus clavatus
NRRL 1]
Length = 1212
Score = 316 bits (809), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 280/983 (28%), Positives = 450/983 (45%), Gaps = 124/983 (12%)
Query: 59 RTPSPSPSPTTPSPLQS----------NPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRK 108
R + SPT +P + N K + ++G PSTP+ A++ E
Sbjct: 3 RGAGAASSPTAATPPSAALKQSTSSTQNMKNQKSILGFFQKSSPSTPSTARN-AEPASSP 61
Query: 109 RIRVYWPLDKAWYEGCVKSFDKECNKHL----------VQYDDGEDELLDLGKEKIEWVQ 158
RV + +G K K K + D EDE + LG K + Q
Sbjct: 62 AQRVSEQREATSGKGTSKRERKAVPKFTQNLTPVPSSDLVVPDEEDEKV-LGSTKDDLAQ 120
Query: 159 ESVSLLKRLRRDSFKKVVVEDDEEMENVEDEI----------SDDRSDSSD-DDWNKNVG 207
++ S +R ++ + E + E E+ +D I S R S + +D + G
Sbjct: 121 KTASPSRRAKK---QVSYAESESEGEDDDDVIFAPNRRNSRASKKRKTSPEPEDEFEQAG 177
Query: 208 KEDVSEDEEVDLV--DEQENKVLRGRKRK--------SSGVKKSKSDGNAVNADFKSPII 257
+ S+DE D + DE + +V +KRK S + S G ++ D +
Sbjct: 178 EVGYSDDEFDDFIVADESDEEVQPSKKRKRPSKAPTRKSSIPVPPSPGEDLDLDIPDAVG 237
Query: 258 KPVKIFGSDKLSNGFDNPVMGDVSERFSAREA-DKFHFLGP-DR-------RDAKRRRPG 308
+ D + + SA A K H P DR RD P
Sbjct: 238 GTAVKWTYDPENQEPRQHRTIQAPSKSSATPAKQKAHLKEPEDRYPWLANIRDMDGHPPN 297
Query: 309 DVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL 368
YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G +
Sbjct: 298 HPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLF 357
Query: 369 DLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR----RKEKGSK 423
DL+ + G PE + + KG+++ V+Q+E+ E+R +K G +
Sbjct: 358 DLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERDGKKAGGKE 417
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDV 481
DK++KRE+ V+T GTL EG +L + ++Y +A+ E+ PA FGI VD
Sbjct: 418 DKIIKRELSCVLTAGTLVEGSMLQDDM-STYCVAIKEAIIEDHPA-------FGIAFVDT 469
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDL 539
AT + L + DD D + +++ RP E++ + +S + R IL++ P + N L
Sbjct: 470 ATGQFSLSEFGDDADMTKFETFVAQTRPQELLLEKSTISTKALR-ILKNNTGPTTIWNHL 528
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
P EFW+A+ TV E L+ +D V+ + D L P L E
Sbjct: 529 KPGKEFWEADITVKE------------LDASDYFVSQ---DDDNLQAWPETLRE----AR 569
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
+ +SA G + YL+ LD L+ F S + + K +VLD L N+E+
Sbjct: 570 AKELAMSAFGALVQYLRMLKLDRDLITIGNF-----SWYDPIRKTSNLVLDGQTLINMEI 624
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV L +
Sbjct: 625 FANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDAKKINARLDAVDAL-NADSSI 683
Query: 720 ALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
+F L+++PD+ERL++R+ AA + Q+F+ L G E ++
Sbjct: 684 RDQFSSQLTKMPDLERLISRIH------------------AANCKAQDFVRVLEGFEQIE 725
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
S +L++T S I +P + S+L+++K AFD +A +G ++P GV+
Sbjct: 726 YTIS----LLKDTGSSGEGVIGQLINAMPDLGSLLEYWKTAFDRNKAKENGILVPKLGVE 781
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
D+D++ + ++++ L LK R+ LG T+I Y GK++Y LEVP ++ +VP++++
Sbjct: 782 EDFDNSQESIEQLHRDLDNLLKRVRRELGSTAICYRDNGKEIYQLEVPVKVK-NVPKNWD 840
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
S+ K RY+ P ++ L+ +L + + +K + R +F EH+ W V +
Sbjct: 841 QMSATKQVKRYYFPELRSLIRKLQETQETHSHIVKEVAGRFYARFDEHYTTWLAAVRIVS 900
Query: 960 GLTLILLDGSLLHAFLILQSNSC 982
L ++ SL A L SC
Sbjct: 901 QLDCLI---SLAKASSSLGHPSC 920
>gi|425765631|gb|EKV04301.1| DNA mismatch repair protein Msh6, putative [Penicillium digitatum
Pd1]
Length = 1222
Score = 315 bits (808), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 209/680 (30%), Positives = 347/680 (51%), Gaps = 69/680 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 311 YDPRTVYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 370
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK----DKV 426
+ G PE + + KG+++ V Q+E+ E+R +E G K DK+
Sbjct: 371 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVVQSESALGKEMRERE-GKKPTKEDKI 429
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
+KRE+ V+T GTL EG +L + ++Y +A+ E A FGI VD AT +
Sbjct: 430 IKRELACVLTAGTLVEGSMLQDDM-STYCVAIKE-----AIVDEHHAFGIAFVDTATGQF 483
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSE 544
L + +DD+D + +++ RP E++ + +S + R IL++ P + N + P E
Sbjct: 484 FLSEFVDDVDMTKFETFVAQTRPRELLLEKSCVSQKAMR-ILKNNTGPTTIWNFMKPGKE 542
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
FW++E T+ E++ +E AD D LT P E + +
Sbjct: 543 FWESEITIRELE------ASEYFVSADD---------DNLTAWP----ETLRQAREKEFL 583
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
+SA G + YL+ ++ L+ F + + + K +VLD L N+E+F NS
Sbjct: 584 MSAFGALVQYLRMLKIERDLITIGNF-----TWYDPIKKATSLVLDGQTLINMEIFANSF 638
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EF 723
G S GTL+ LN C+T FGKR+ + W+ PL +S I R DAV L P A +F
Sbjct: 639 DGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAVDSLNA--DPSARDQF 696
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
L+++PD+ERL++R+ A + + Q+F+ L G E +D
Sbjct: 697 SSRLTKMPDLERLISRIHAGN------------------CKAQDFVRVLEGFEQIDY--- 735
Query: 784 SLGAILENTESRQLHHILTP-GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
+ +L+ +E+ I+ +P + S+L ++K AFD +A +G ++P GV+ D+
Sbjct: 736 -IMGLLKESETGSGESIIGQLTAAMPDLASLLGYWKTAFDRPKAKENGILVPESGVEEDF 794
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D++ + ++++ L LK+ R+ LG ++I Y GK++Y LEVP ++ ++P+D+ S
Sbjct: 795 DNSQEIIEQLHRDLDAMLKKARQDLGSSAICYRDNGKEIYQLEVPIKVK-NIPKDWNQMS 853
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLT 962
+ K RY+ P ++ L+ +L +A+ +K + R +F EH++ W V + L
Sbjct: 854 ATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFHARFDEHYDTWLAAVRIVSQLD 913
Query: 963 LILLDGSLLHAFLILQSNSC 982
++ SL A + SC
Sbjct: 914 CLI---SLAKASGAIGHPSC 930
>gi|358381647|gb|EHK19322.1| hypothetical protein TRIVIDRAFT_81241 [Trichoderma virens Gv29-8]
Length = 1208
Score = 315 bits (808), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 225/738 (30%), Positives = 367/738 (49%), Gaps = 82/738 (11%)
Query: 253 KSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYY 312
K P++KP + + +P V E+ +E D+ + + RD ++R P D Y
Sbjct: 261 KQPVVKPTERVATK-------DP---KVKEKAYMKEPDERYTWLANIRDKEKRSPTDPDY 310
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPRTLY+PP S +KQ+WE K D ++FFK GKFYEL+E DA +G +E D +
Sbjct: 311 DPRTLYIPPIAWNKFSPFEKQYWEIKQDLWDTIVFFKKGKFYELYEKDATIGHQEFDFKM 370
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK--DKVVKR 429
+ G PE + V + K Y+V VEQ ET E+R ++ +K DKV+ R
Sbjct: 371 TDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETNLGKEMRERQDKTKKADKVISR 430
Query: 430 EICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRII 487
++ ++T GTL +G +L + A+Y +++ ES + PA FGI D AT R
Sbjct: 431 KLGCILTAGTLVDGSMLQDDM-AAYCVSIKESVVDDLPA-------FGIAFTDTATGRFF 482
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEF 545
L +DD+D + L++++ P E++ + LS ++ R IL++ +P + +L P +EF
Sbjct: 483 LSGFVDDIDRTKFETLVAQIGPRELLLEKSGLSTKSLR-ILKNNTSPTTIWTNLKPGTEF 541
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
WDA+TT E+ + E DG P L EL V+
Sbjct: 542 WDADTTRRELDCAKYFVREE----------------DGEDIWPEALKEL----KDDDLVM 581
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+GG + YL+ L+ LL FE+ + + K +VLD L NLE+F N+ +
Sbjct: 582 SAIGGLVSYLRFLKLEGPLLSQGNFEV-----YNPIQKNSTLVLDGQTLTNLELFANTVN 636
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FR 724
G+S GTL+ LN C+T FGKRL R W+A PL N I ER DAV L + P E F
Sbjct: 637 GNSDGTLFGLLNKCITPFGKRLFRQWVAHPLCNIDRINERLDAVELLN--DDPSVREQFA 694
Query: 725 KALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
L ++PD+ERL++R+ A + + ++F+ L G E ++ +
Sbjct: 695 SQLVKMPDLERLISRIHAGA------------------CKPEDFVRVLEGFEQIEYTMTL 736
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
+GA + + ++T +P + L ++ AFD +A +IP GVD D+D+
Sbjct: 737 VGAF--KGGNGLIDRLIT---SMPNLEEPLAYWSTAFDRQKAKEEKLMIPESGVDEDFDA 791
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ +++E++ L L E++ L ++ + IGK++Y +E P+S++ +P + S+
Sbjct: 792 SVARIEEVKNQLNDLLAEKKAELKCKTLKFTDIGKEIYQIEAPKSVK--IPSSWRQMSAT 849
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K R++ + L+ EL +AE ++ + R +F + W + + A L +
Sbjct: 850 KDVKRWYFTELTGLVRELQEAEETHSQLIREVASRFCKKFDVDYETWLKAIKIIAQLDCL 909
Query: 965 LLDGSLLHAFLILQSNSC 982
+ SL A + L SC
Sbjct: 910 V---SLAKASMSLGEPSC 924
>gi|406864091|gb|EKD17137.1| DNA mismatch repair protein Msh6 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1949
Score = 315 bits (807), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 211/681 (30%), Positives = 342/681 (50%), Gaps = 74/681 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D R G YDPRT+Y+PP S + Q+WE K K D V+FFK GKFYEL+E
Sbjct: 1024 QDMDRNPIGHPDYDPRTVYIPPGAWAKFSPFETQYWEIKQKFWDTVVFFKKGKFYELYEN 1083
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + + KGY++ V+Q E+ E+R
Sbjct: 1084 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGYKIARVDQCESALGKEMREA 1143
Query: 419 EKGSK---------DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
E S DK+++RE+ V+T GTL EG +L + A++ +A+ E Q
Sbjct: 1144 EGKSTGKKVVVNKADKIIRRELACVLTGGTLVEGSMLQDDM-ATFCVAIKE-------QM 1195
Query: 470 TDR--CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI 527
D +G+ VD AT + L + +DD+D + L++++RP E++ + LS + R I
Sbjct: 1196 IDDLPSYGVAFVDTATGQFFLSEFVDDVDLTKFETLIAQIRPQELLLEKSHLSTKALR-I 1254
Query: 528 LRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLT 585
L++ P + N L P SEFW AE T E+ ++ E ++
Sbjct: 1255 LKNNTTPTTIWNHLKPSSEFWTAEVTRRELGCNGYFVSEEGGSE---------------- 1298
Query: 586 CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP 645
I E + S ++SA+G + YL+ L+ LL F + + + K
Sbjct: 1299 ----IWPEALEAAKSSDALMSAMGALVQYLRTLKLERNLLSQQNF-----TAYSPIQKGT 1349
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
+VLD L NLEVF N+ G +GTL+A LN CVT FGKR+ R W+ PL ++ I ER
Sbjct: 1350 TLVLDGQTLINLEVFANTFDGSKAGTLFALLNRCVTPFGKRMFRQWVCHPLADADRINER 1409
Query: 706 QDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQL 765
DAV L ++ + +F ++S +PD+ERL++R+ A S D K +
Sbjct: 1410 LDAVDML-NKDRTLSDQFVASMSSMPDLERLISRIHAGS-----------CRPDDFVKVI 1457
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVE 825
F + EL++++ I++ + +P + +K +K AFD +
Sbjct: 1458 DGFEQIEYTMELLERSAKGGKGIVDRLIN-----------AMPDLTGPIKFWKTAFDHQK 1506
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS-ITYVTIGKDLYLL 884
A S ++P GV+ ++D + +++EIE L LK +RK LG + I + IGK++Y L
Sbjct: 1507 AKESRILVPERGVEEEFDESQDRIEEIEGELEDLLKRKRKELGGSQKINFKNIGKEVYQL 1566
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EVP S++ VP+D+++ SS F RY+ P +K L+ +L +A+ +K + ++L +F
Sbjct: 1567 EVPASIK--VPKDWQMMSSAAAFKRYYFPELKTLIRQLQEAQETHGQIVKVVARKLYARF 1624
Query: 945 CEHHNKWRQMVAATAGLTLIL 965
E ++ W V + L ++
Sbjct: 1625 DEDYSLWLPAVRTVSHLDCLI 1645
>gi|17508447|ref|NP_491163.1| Protein MSH-6 [Caenorhabditis elegans]
gi|373220156|emb|CCD72556.1| Protein MSH-6 [Caenorhabditis elegans]
Length = 1186
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 218/715 (30%), Positives = 355/715 (49%), Gaps = 60/715 (8%)
Query: 281 SERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ERF + + F FL PD+ RD +R D YDP+TL++PPDF + + G +QWW KS
Sbjct: 206 AERF---DHESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKS 262
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+H D ++ FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY
Sbjct: 263 QHFDTILLFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGY 322
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANP 450
+V +EQTETP+ LE R ++ +K+KVV+RE+C V + GT T G L + +P
Sbjct: 323 KVARIEQTETPQMLEERNQKTKTKEKVVRREVCRVTSNGTRTYGVLDGVDLGSASSTLDP 382
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A +L+A+ E + +S+ +G+C++D T+ I +GQ DD S L LL+ + V
Sbjct: 383 TAKHLLAIKEFHNPETGKSS---YGVCMIDTTTAHIRIGQFEDDDYRSQLRTLLANVIVV 439
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ I +S T+ I + V L+P +F AE V RI
Sbjct: 440 QAIVERGSISSTTKSIINGILFSVPVEHLLPKKQFMTAEDVV--------RI-------- 483
Query: 571 DSNVANSQAEGDGLTCLPGIL------SELISTGDSGSQV-LSALGGTLFYLKKSFLDET 623
V+N G + P +L S ++ + Q+ LSA G +YL+ S +D
Sbjct: 484 ---VSNEDYYGSDASEWPEVLKGMLEDSSILPKPSTDWQLALSAFGAIFWYLRDSLIDVD 540
Query: 624 LLRFAKFELLPCSGFGDMAKKPY-------MVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+L + + + KK ++LD ALENL + N R + +LY +
Sbjct: 541 MLSMRNVTIYNSNSMENDQKKEKIDWNGKNLILDGTALENLNIVPNGRDSHLT-SLYYVI 599
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALSRLPDMER 735
N C T FG+RLLR+WL +P + + +RQ A+ L + F L ++PD++R
Sbjct: 600 NKCSTPFGRRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASSFMTTATATLKKIPDLDR 659
Query: 736 LLARL--FASSEANGRNSNKVVLYEDAAK---KQLQEFISALHGCELMDQACSSLGAILE 790
LL ++ + ++ + ++ D K K++ E ++A+ G +L ++ + +
Sbjct: 660 LLQKIHTIGLKYRSEKHPDSRAIFFDTIKTNQKKIAELLAAIDGFKLCNKLRKEYIKVQK 719
Query: 791 NTESRQ-LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
E + L +L + + + + F+ FD A G+I+P+ G D +YD A +V
Sbjct: 720 EGEGCELLDELLGNEQEMEEVDENIYFFEKMFDRSTAMKDGKIVPNAGCDEEYDEALNRV 779
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
KE L + K+ SI +V GK YLLE+PE+ + V +EL+S +KGF R
Sbjct: 780 KEALNELNDY-KDSVAKKYSCSIKFVDSGKVKYLLEMPENTK--VSSSFELKSRRKGFIR 836
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
Y TP+ ++L+ L E EK +R+ QF + W + V + ++
Sbjct: 837 YSTPDSEQLVAALDAVEKEKSKLGDDATRRVFEQFGHKNPIWLETVKLVSSFDVL 891
>gi|308505948|ref|XP_003115157.1| CRE-MSH-6 protein [Caenorhabditis remanei]
gi|308259339|gb|EFP03292.1| CRE-MSH-6 protein [Caenorhabditis remanei]
Length = 1181
Score = 315 bits (806), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 224/740 (30%), Positives = 365/740 (49%), Gaps = 71/740 (9%)
Query: 281 SERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+ERF D +L PD+ RD +R D YDP+TL++PP+F + + G +QWW KS
Sbjct: 193 AERFDHESLD---WLKPDKIRDGCKRPMSDPEYDPKTLWVPPEFHQKQTPGHRQWWTIKS 249
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+H D +I FK+GKFYE + MDA + L++ +M+G H GFPE S ++L GY
Sbjct: 250 QHFDTIILFKVGKFYETYHMDAVEVVRALNIAFMRGSYAHAGFPEHAASKFADQLMNHGY 309
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL---------LSANP 450
+V VEQTETP+ LE R ++ +KDKVV+RE+C V + GT T G L + +P
Sbjct: 310 KVARVEQTETPQMLEERNQKTKAKDKVVRREVCRVTSNGTRTYGVLDGVDLGSAASTLDP 369
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A +L+A+ E + + +S+ +GIC++D T+ I +GQ DD S L LL+ + V
Sbjct: 370 TAKHLLAIKEFHNAETGKSS---YGICMIDTTTAHIRIGQFDDDDYRSKLRTLLANVIVV 426
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+ + N +S T+ I + + L+ +F ++ V R+
Sbjct: 427 QTLVERNTISASTKSIINGILFSVPIEHLLAKKQFMTSDDVV--------RL-------- 470
Query: 571 DSNVANSQAEGDGLTCLPGILSELIST-------GDSGSQVLSALGGTLFYLKKSFLDET 623
V+N G ++ P +L ++ + LSA G ++YL+ S +D
Sbjct: 471 ---VSNDDYFGSDVSGWPDVLKSMLDESSVLPKPSSDWNLALSAFGAIVWYLRDSLIDVD 527
Query: 624 LL--RFAKFELLPCSGFGDMAKK--------PYMVLDAPALENLEVFENSRSGDSSGTLY 673
+L R F S + K ++LD ALENL + N R + +LY
Sbjct: 528 MLSMRNVTFYDSKTSKTEKQSSKDKKIDWTGKNLILDGTALENLNIVPNGRDSHLT-SLY 586
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPD 732
+N C T FG+RLLR+WL +P + +R RQ+AV + + + A L ++PD
Sbjct: 587 YVINKCSTPFGRRLLRSWLLQPTCDPKKLRLRQEAVKWMTSSDATSFVNVATATLKKIPD 646
Query: 733 MERLLARLFA---SSEANGRNSNKVVLYED--AAKKQLQEFISALHGCELMDQACSSLGA 787
++RLL ++ A ++ + ++ +K++ E +SA+ G +L +Q
Sbjct: 647 LDRLLQKIHTIGLKYRAEKHPDSRAIFFDTIKTNQKKIGELLSAIDGFKLCNQLRKEYLK 706
Query: 788 ILENTESRQ-LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ ++ E + L +L + + + + F+ FD A G+I+P+ G D +YD A
Sbjct: 707 VQKDGEGCELLDELLGNEQQMEEVDENIYFFEKMFDRTTAQKDGKIVPNEGCDEEYDQAT 766
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+VKE L + K+ +I +V GK YLLE+PE+ + V +EL+S +KG
Sbjct: 767 ARVKEALGELNAY-KDTIAKKYSCAIKFVDSGKVKYLLEMPENAK--VSSSFELKSRRKG 823
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILL 966
F RY TP+ ++L+ L AE EK +R+ QF + W + V + ++
Sbjct: 824 FIRYSTPDSEELVAALDTAEKEKSKLGDDATRRVFEQFGHKNPVWLETVRLVSNFDVL-- 881
Query: 967 DGSLLHAFLILQSNSCSSEM 986
+ L F SNSC +M
Sbjct: 882 --TSLATF----SNSCPFDM 895
>gi|350632200|gb|EHA20568.1| hypothetical protein ASPNIDRAFT_50490 [Aspergillus niger ATCC 1015]
Length = 1188
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 216/692 (31%), Positives = 350/692 (50%), Gaps = 69/692 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD G YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 265 RDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 324
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + + KG+++ V+Q E+ E+R +
Sbjct: 325 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRER 384
Query: 419 ----EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
G +DKV++RE+ +V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 385 DGKKGGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEALIDDKPA------ 437
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 438 -FGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKALR-ILKNNT 495
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P L N L P+ EFW+A+ TV E+ D++ + D L P
Sbjct: 496 GPTTLWNYLKPVKEFWEADITVKEL---------------DASEYFVSQDDDNLQAWPEA 540
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ ++ L+ F + + + K +VLD
Sbjct: 541 LRE----ARDKELVMSAFGALVQYLRLLKIERDLITIGNF-----TAYDPIKKATSLVLD 591
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 592 GQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLDAVD 651
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ AA + Q+F+
Sbjct: 652 ALNA-DPTVRDQFSSQLTKMPDLERLISRVH------------------AANCKAQDFLR 692
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ S +L+ + S I G+P + +L+++K AFD +A +G
Sbjct: 693 VLEGFEQIEYTMS----LLKESGSAGEGVIGQLISGMPDLNELLEYWKTAFDRSKARENG 748
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+DS+ + +++I L LK RK LG ++I Y GK++Y LEVP +
Sbjct: 749 ILVPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKEIYQLEVPIKV 808
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++KL+ +L +A+ +K + R +F E++
Sbjct: 809 K-NIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAGRFYARFDENYTT 867
Query: 951 WRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
W V A L ++ SL A L SC
Sbjct: 868 WLAAVRIVAQLDCLI---SLAKASSSLGQPSC 896
>gi|255936397|ref|XP_002559225.1| Pc13g07990 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583845|emb|CAP91868.1| Pc13g07990 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1207
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 203/680 (29%), Positives = 347/680 (51%), Gaps = 69/680 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 296 YDPRTIYIPPLAWSRFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 355
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK----DKV 426
+ G PE + + KG+++ V+Q+E+ E+R +E G K DK+
Sbjct: 356 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMRERE-GKKPTKDDKI 414
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATS 484
+KRE+ V+T GTL EG +L + ++Y +A+ E ++ PA FGI VD AT
Sbjct: 415 IKRELACVLTAGTLVEGSMLQDDM-STYCVAIKEGIVDERPA-------FGIAFVDTATG 466
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPL 542
+ + + +DD+D + +++ RP E++ + +S + R IL++ +P + N + P
Sbjct: 467 QFFMSEFVDDVDLTKFETFVAQTRPRELLLEKSCVSQKAMR-ILKNNTDPTTIWNFMKPG 525
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
EFW+++ T+ E+ D++ + D L P E +
Sbjct: 526 REFWESDITLREL---------------DASEYFVSVDDDNLAAWP----ETLRQAREKE 566
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
++SA G + YL+ ++ L+ F + + + K +VLD L N+E+F N
Sbjct: 567 LLMSAFGALVQYLRMLKIERDLITIGNF-----TWYDPIKKATSLVLDGQTLINMEIFAN 621
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G S GTL+ LN C+T FGKR+ + W+ PL +S I R DAV L + +
Sbjct: 622 SFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDSKKINARLDAVDSL-NADPSTRDQ 680
Query: 723 FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQAC 782
F L+++PD+ERL++R+ A + + Q+F+ L G E +D
Sbjct: 681 FSSQLTKMPDLERLISRIHAGN------------------CKAQDFVRVLEGFEQIDY-- 720
Query: 783 SSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
++G + E+ I +P + S+L ++K AFD +A +G ++P GV+ D+
Sbjct: 721 -TMGLLKESDTGSGESIIGQLTTAMPDLASLLGYWKTAFDRPKAKENGILVPESGVEEDF 779
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D++ + ++++ L LK+ R+ LG ++I Y GK++Y LEVP ++ ++P+D+ S
Sbjct: 780 DNSQENIEQLHRDLDTLLKKARRDLGSSAICYRDNGKEIYQLEVPIKVK-NIPKDWNQMS 838
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLT 962
+ K RY+ P ++ L+ +L +A+ +K + R +F EH++ W V + L
Sbjct: 839 ATKQVKRYYFPELRSLIRKLQEAQETHSQIVKEVAGRFHARFDEHYSTWLAAVRIVSQLD 898
Query: 963 LILLDGSLLHAFLILQSNSC 982
++ SL A + SC
Sbjct: 899 CLI---SLAKASAAIGHPSC 915
>gi|281206806|gb|EFA80990.1| Muts-like protein [Polysphondylium pallidum PN500]
Length = 1231
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 219/702 (31%), Positives = 362/702 (51%), Gaps = 82/702 (11%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
S ++ +++ FL D DA + + G+ YDP TLY+P FL N + ++Q+W+ KSK+ DK
Sbjct: 311 SKKDDERYQFL-VDIADANQIKKGEPNYDPSTLYIPSTFLVNFTPFERQYWDIKSKNYDK 369
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++FFK GKFYEL+E DA +G + DL+ + G PE++F +K GYR+
Sbjct: 370 IVFFKKGKFYELYEDDADLGHQLFDLKMTDRVNMRMVGVPEKSFQQWAKKFLEAGYRITK 429
Query: 404 VEQTETPEQLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V+Q E+ ++ R+ +KG SK+ +++RE+ +++T GTL + LL + ++YLM++ E
Sbjct: 430 VDQVESRLAMDKRQNQKGASTSKETIIQREVTSILTIGTLVDDSLL-LDSTSNYLMSIKE 488
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+ GIC +D + L + DD + S L LL + P EI+ + +S
Sbjct: 489 DDYKQE-------LGICFLDSSVGLFYLTEFKDDENRSHLETLLLQTMPKEILYDKSSIS 541
Query: 521 PETERAILR-HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
T I R +R + +EFW + T+ ++ E + KAD +
Sbjct: 542 QTTLNVIKRVLSREKYILTTRQPTEFWSTDFTLGKL---------EEMQKADD---LKKV 589
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
GD + +L ALGG YL+ + + + + A+FE+ +
Sbjct: 590 LGDNIEVEHSLLG-------------YALGGCCCYLEDIKMADQVTKQARFEM-----YN 631
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ +VLD +L NLE+F N+ G ++G+L+ L+ C T FGKRLL+ W+ RPL +
Sbjct: 632 TLDGTSSLVLDGQSLVNLEIFANTTDGSTNGSLFKVLDRCSTPFGKRLLKQWVCRPLSSR 691
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I ER DAV L G NQ + L+R+PD+ER+L+R+ A S G
Sbjct: 692 EKINERLDAVQYL-GENQELMSKLSTMLTRVPDLERMLSRIKACSSKIG----------- 739
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILE-NTESRQLHHILTPGKGLPAIVSILKHFK 818
+ ++ L+ E Q L + E N+ + Q H +T GKG P + +++ +
Sbjct: 740 -------DLVTVLNVLERCQQCLEELDCVDEINSPTLQYH--VTVGKGFPNLKTLISSMR 790
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
+F+ N ++IP G+ +YD +++K IE L +HLK+Q+KL SI Y +IG
Sbjct: 791 SSFEI----NVVQLIPSKGLFTEYDECQERIKAIEQELEQHLKDQKKLFSSNSIAYKSIG 846
Query: 879 KDLYLLEVP-------ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
K++Y LE+P ++ G EL+S K RYWTP I+K + +L++ E++ S
Sbjct: 847 KEIYQLEIPIDVYNKHKAKMGDYIYKSELKSKSK---RYWTPFIEKKVKQLAE-ENDSFS 902
Query: 932 ALKSILQ-RLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLH 972
AL+ +++ R+ QF + + W Q A+ A + IL + H
Sbjct: 903 ALQKVVEVRIQEQFNVNASAWCQATASLAQIDCILSLAKVSH 944
>gi|169773547|ref|XP_001821242.1| DNA mismatch repair protein Msh6 [Aspergillus oryzae RIB40]
gi|238491536|ref|XP_002377005.1| DNA mismatch repair protein Msh6, putative [Aspergillus flavus
NRRL3357]
gi|83769103|dbj|BAE59240.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697418|gb|EED53759.1| DNA mismatch repair protein Msh6, putative [Aspergillus flavus
NRRL3357]
gi|391869161|gb|EIT78363.1| mismatch repair ATPase MSH6 [Aspergillus oryzae 3.042]
Length = 1201
Score = 313 bits (801), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 213/693 (30%), Positives = 353/693 (50%), Gaps = 73/693 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD PG YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 283 RDIDGHSPGHPDYDPRTLYIPPLAWAKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 342
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRR- 417
DA +G + DL+ + G PE + + KG+++ V+Q E+ E+R
Sbjct: 343 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRER 402
Query: 418 --KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRC 473
K+ G +DKV++RE+ +V+T GTL EG +L + ++Y +A+ E+ PA
Sbjct: 403 DGKKGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEAIIEDFPA------- 454
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
FG+ VD AT + L + +DD D + +++ RP E++ + +S + R IL++
Sbjct: 455 FGLAFVDTATGQFFLSEFVDDADMTKFETFVAQTRPQELLLEKSTVSQKALR-ILKNNTG 513
Query: 534 P--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
P + N L P EFW+A+ TV E+ ++ +E + D L P
Sbjct: 514 PTTIWNHLKPGKEFWEADITVKEM-DVSEYFVSE--------------DDDNLKAWP--- 555
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
E + V+SA G + YL+ LD L+ F S + + K +VLD
Sbjct: 556 -EALRAARDKELVMSAFGALVQYLRLLKLDRDLITIGNF-----SSYDPIKKASSLVLDG 609
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 610 QTLINMEIFANSFDGGSDGTLFQLLNRCITPFGKRMFKQWVCHPLIDAKKINARLDAVDA 669
Query: 712 LRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISA 771
L + +F L+++PD+ERL++R+ AA + Q+F+
Sbjct: 670 LNA-DPNIRDQFSSQLTKMPDLERLISRIH------------------AANCKAQDFLRV 710
Query: 772 LHGCELMDQACSSLGAILENTESRQ--LHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
L G E ++ S +L+++ S + + +++ +P + +L+++K AFD +A +
Sbjct: 711 LEGFEQIEYTVS----LLKDSGSGEGVIGQLIS---AMPDLNELLEYWKTAFDRTKAREN 763
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
G ++P GV+ D+D++ + ++E+ L LK R+ LG T+I Y GK++Y LEVP
Sbjct: 764 GILVPKSGVEEDFDNSQEYIEELHNELDSLLKRVRRELGSTAICYRDNGKEIYQLEVPIK 823
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
++ ++P++++ S+ K RY+ P ++ ++ +L +A+ +K + R +F EH+
Sbjct: 824 VK-NIPKNWDQMSATKQVKRYYFPELRTIIRKLQEAQETHSQIVKEVAGRFYARFDEHYI 882
Query: 950 KWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
W V + L ++ SL A L SC
Sbjct: 883 TWLAAVKIISQLDCLI---SLAKASSSLGQPSC 912
>gi|344229566|gb|EGV61451.1| DNA mismatch repair protein Msh6 [Candida tenuis ATCC 10573]
Length = 1167
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 206/706 (29%), Positives = 356/706 (50%), Gaps = 66/706 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + RDA++R D YDPR+LY+P + +KQ+WE KSK D
Sbjct: 235 FAKENEERYQWL-VNIRDAEKRSSEDPNYDPRSLYIPQAAWSKFTPFEKQYWEIKSKMWD 293
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 294 TVVFFKKGKFYELYENDAVIANSKFDLKLAGGGRANMKLAGIPEMSFDYWAKEFISNGYK 353
Query: 401 VLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V V+Q E+ E+R GSK+ KV+KRE+ AV+T GTLT+ +++ + A+Y +++
Sbjct: 354 VARVDQKESLLAKEMRGG--GSKEEKVIKRELTAVLTGGTLTDLNMITDDM-ATYCLSIK 410
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + D FG+ VD ATS + ++ DD C+ L L++++RP E+I + L
Sbjct: 411 EEKVN----DNDYKFGVVFVDTATSELNFIEIEDDKYCNKLETLITQVRPKEVICEKHNL 466
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S + + + N + N L L+EFWD + T+ ++ V +
Sbjct: 467 SSLASKVLKYNNSNQIWNALDSLTEFWDYDLTLEKL------------------VKSQYY 508
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE---TLLRFAKFELLPCS 636
G+ L L+ D+ +A GG LFYLK LDE TL F K+++
Sbjct: 509 PGEDLDDFSNFPELLVEFKDNHQLAFNAFGGLLFYLKTLKLDESIMTLKNFKKYDI---- 564
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ + +++LD L NLE+ NS G GTL+ +N +T FGKR+L+TW+ PL
Sbjct: 565 ---NKSSSSHLILDGITLNNLEILNNSHDGSDKGTLFKMINKAITPFGKRMLKTWVLNPL 621
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
N+ I ER ++ L G F L+ LPD+ERLLAR+ S
Sbjct: 622 LNAEDINERFKSIEFLMGDGADFRQTLESGLTGLPDLERLLARIHGGS------------ 669
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+ ++F+ + G E + + +L + E LH + G+ + ++
Sbjct: 670 ------LRFKDFLKVIEGFERISKLVDNLRE-FTSREMGSLHKFV--GEFPSDLHELIAE 720
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
++D+FD ++A S I P G+D ++D + K+ +E+ L +L++ ++ I +
Sbjct: 721 WEDSFDRIQA-LSDVISPTKGIDEEFDDSMDKINNLESQLNTYLQQYKRQYKSQEICFRD 779
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
GK+++L+E+P ++ ++P+D++ S RYW+P +K L+ EL + + + ++
Sbjct: 780 SGKEIFLIELPNKIK-NIPKDWQTMGSTSKVKRYWSPEVKLLVRELLEQKELHKMVCDNL 838
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ +F H+N W + + + + L ++ SL A ++ SC
Sbjct: 839 KSNMFKKFDTHYNTWCKAIGSLSKLDCLI---SLTRASELIGYPSC 881
>gi|317038145|ref|XP_001401672.2| DNA mismatch repair protein Msh6 [Aspergillus niger CBS 513.88]
Length = 1210
Score = 311 bits (798), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 215/692 (31%), Positives = 348/692 (50%), Gaps = 69/692 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD G YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 287 RDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 346
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + + KG+++ V+Q E+ E+R +
Sbjct: 347 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRER 406
Query: 419 ----EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
G +DKV++RE+ +V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 407 DGKKGGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEALIDDKPA------ 459
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 460 -FGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKALR-ILKNNT 517
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P L N L P+ EFW+A+ TV E+ D + + D L P
Sbjct: 518 GPTTLWNYLKPVKEFWEADITVKEL---------------DVSEYFVSQDDDNLQAWPEA 562
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ ++ L+ F + + + K +VLD
Sbjct: 563 LRE----ARDKELVMSAFGALVQYLRLLKIERDLITIGNF-----TAYDPIKKATSLVLD 613
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 614 GQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLDAVD 673
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ AA + Q+F+
Sbjct: 674 ALNA-DPTVRDQFSSQLTKMPDLERLISRVH------------------AANCKAQDFLR 714
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ S +L+ + S I G+P + +L+++K AFD +A +
Sbjct: 715 VLEGFEQIEYTMS----LLKESGSAGEGVIGQLISGMPDLNELLEYWKTAFDRSKARENS 770
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+DS+ + +++I L LK RK LG ++I Y GK++Y LEVP +
Sbjct: 771 ILVPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKEIYQLEVPIKV 830
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++KL+ +L +A+ +K + R +F E++
Sbjct: 831 K-NIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAGRFYARFDENYTT 889
Query: 951 WRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
W V A L ++ SL A L SC
Sbjct: 890 WLAAVRIVAQLDCLI---SLAKASSSLGQPSC 918
>gi|134058585|emb|CAK44621.1| unnamed protein product [Aspergillus niger]
Length = 1193
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 215/692 (31%), Positives = 348/692 (50%), Gaps = 69/692 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD G YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 270 RDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 329
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + + KG+++ V+Q E+ E+R +
Sbjct: 330 DATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQIESALGKEMRER 389
Query: 419 ----EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
G +DKV++RE+ +V+T GTL EG +L + ++Y +A+ E+ + PA
Sbjct: 390 DGKKGGGKEDKVIRRELSSVLTAGTLVEGSMLQDDM-STYCVAIKEALIDDKPA------ 442
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 443 -FGIAFVDTATGQFFLSEFVDDVDMTKFETFVAQTRPQELLLEKSAVSQKALR-ILKNNT 500
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P L N L P+ EFW+A+ TV E+ D + + D L P
Sbjct: 501 GPTTLWNYLKPVKEFWEADITVKEL---------------DVSEYFVSQDDDNLQAWPEA 545
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E V+SA G + YL+ ++ L+ F + + + K +VLD
Sbjct: 546 LRE----ARDKELVMSAFGALVQYLRLLKIERDLITIGNF-----TAYDPIKKATSLVLD 596
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G S GTL+ LN C+T FGKR+ + W+ PL ++ I R DAV
Sbjct: 597 GQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLDAVD 656
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ AA + Q+F+
Sbjct: 657 ALNA-DPTVRDQFSSQLTKMPDLERLISRVH------------------AANCKAQDFLR 697
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ S +L+ + S I G+P + +L+++K AFD +A +
Sbjct: 698 VLEGFEQIEYTMS----LLKESGSAGEGVIGQLISGMPDLNELLEYWKTAFDRSKARENS 753
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
++P GV+ D+DS+ + +++I L LK RK LG ++I Y GK++Y LEVP +
Sbjct: 754 ILVPKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKEIYQLEVPIKV 813
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ ++P++++ S+ K RY+ P ++KL+ +L +A+ +K + R +F E++
Sbjct: 814 K-NIPKNWDQMSATKQVKRYYFPELRKLIRQLQEAQETHSQIVKEVAGRFYARFDENYTT 872
Query: 951 WRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
W V A L ++ SL A L SC
Sbjct: 873 WLAAVRIVAQLDCLI---SLAKASSSLGQPSC 901
>gi|396468500|ref|XP_003838188.1| hypothetical protein LEMA_P117120.1 [Leptosphaeria maculans JN3]
gi|312214755|emb|CBX94709.1| hypothetical protein LEMA_P117120.1 [Leptosphaeria maculans JN3]
Length = 1288
Score = 310 bits (795), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 226/722 (31%), Positives = 354/722 (49%), Gaps = 91/722 (12%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
ER SA E + + +DA R YDPRTLY+PP S ++Q+WE KSK
Sbjct: 350 ERPSASEPETRYSWLAHMQDADRHPDDHPDYDPRTLYIPPGAWDQFSPFERQYWEIKSKF 409
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA +G + DL+ + G PE + + + G++
Sbjct: 410 WDTIVFFKKGKFYELYEKDATIGHQLFDLKLTDRVNMRMVGVPEASLDLWAAQFVANGHK 469
Query: 401 VLVVEQTETPEQLELR------RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDA 452
V V+Q E+ E+R K KGSK DKV++RE+ AV+T GTL + +L ++ +
Sbjct: 470 VARVDQMESALAKEMRERDDVGEKSKGSKKLDKVIRRELAAVLTSGTLVDAGMLQSDM-S 528
Query: 453 SYLMALTESNQS--PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
+Y MA+ E ++ PA FG+ VD AT++ L + DD+D + L++++RP
Sbjct: 529 TYCMAVKEIDRDNLPA-------FGVAFVDTATAQFQLCEFTDDIDMTKFETLIAQMRPG 581
Query: 511 EIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
E++ + LS + R IL++ P + N L P+ EFW A+TT+ EI
Sbjct: 582 ELLLEKSCLSAKAMR-ILKNNTAPSTIWNTLKPIKEFWPADTTIREI------------- 627
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
D+N + P +L E V+SA G L YL+ ++ L+
Sbjct: 628 --DANNYFESPTEHNIEAWPPVLRE----AREQELVMSAFGALLQYLRTLKIERDLVTLG 681
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
F+ + + K +VLD +L NLEVF N+ G S GTL+A LN C+T FGKRLL
Sbjct: 682 NFQW-----YDPIRKATSLVLDGQSLINLEVFANTFDGSSEGTLFAMLNRCITPFGKRLL 736
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
R W+ PL ++ I R DAV L + F +LS+LPD+ERL++R+
Sbjct: 737 RQWVCHPLADAQKINARLDAVDALNA-DSTVMDSFSSSLSKLPDLERLISRVH------- 788
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG-- 806
A + + Q+F+ L G E ++ S L RQ G+G
Sbjct: 789 -----------ALRCRAQDFLKVLEGFEQIEYTISLL---------RQFGD----GEGVI 824
Query: 807 ------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
+P + + L +K AFD A G ++P G++ D+D++ +++ A + L
Sbjct: 825 GQLISSMPDLNTALSKWKSAFDRNVAKKEGILVPELGIEEDFDNSLAEIESCRADMDVLL 884
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
K+ RK LG +I + GK++ LEVP+ ++ VP ++ S+ RY++P ++KL+
Sbjct: 885 KKARKDLGCNTICFRDNGKEICQLEVPKKVK--VPSSWDQMSATAKVTRYYSPELRKLVR 942
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSN 980
+L +A+ + + R +F E + W V A L ++ SL A L
Sbjct: 943 KLQEAQEIHGQITREVATRFCKRFDEDYKTWLAAVKIIAQLDCLI---SLAKASASLGEP 999
Query: 981 SC 982
SC
Sbjct: 1000 SC 1001
>gi|315051840|ref|XP_003175294.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
gi|311340609|gb|EFQ99811.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
Length = 1211
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 220/722 (30%), Positives = 359/722 (49%), Gaps = 81/722 (11%)
Query: 281 SERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
SE + + K H P+ R D + G YDPRTLY+PP S +K
Sbjct: 262 SETRPSNKPKKAHMTEPENRYPWLAKIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEK 321
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNV 391
Q+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 322 QYWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWA 381
Query: 392 EKLARKGYRVLVVEQTETPEQLELR-RKEKGSK------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 382 NQFVAKGFKIARVDQSESALSKEMREREDKGNKGKAQKEDKVIKRELACVLTTGTLVEGS 441
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ ES + PA FGI VD AT + L Q +DD+D +
Sbjct: 442 MIQGDM-STYCVAIKESIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 493
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV E
Sbjct: 494 FVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVRE------ 546
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L+ D V+ EG ++ P +L + V+SALG L YL+ +
Sbjct: 547 ------LDAGDYFVS---GEGSYVSGWPQVLQD----ARDKDLVMSALGALLQYLEMLKI 593
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 594 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCV 648
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL ++ I R DAV L + +F L+++PD+ERL++R+
Sbjct: 649 TPFGKRLFKQWVCHPLMDTTKINARLDAVESL-NADSTVREQFSSQLTKMPDLERLISRV 707
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 708 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGYGLIGQ 746
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +LK ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 747 LI--SAMPNLNGLLKFWETAFDRPKARESDILVPEEGIEEEFDASRKGIEQLEDDLEQVL 804
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 805 HRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 863
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSN 980
+L +A +K + R +F + ++ W V A L ++ L A L
Sbjct: 864 KLQEARETHAQIVKGVAGRFYARFDKDYSSWLAAVKIIAQLDCLI---GLAKASTALGHP 920
Query: 981 SC 982
SC
Sbjct: 921 SC 922
>gi|378726093|gb|EHY52552.1| DNA mismatch repair protein MSH6 [Exophiala dermatitidis
NIH/UT8656]
Length = 1250
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 217/712 (30%), Positives = 343/712 (48%), Gaps = 78/712 (10%)
Query: 288 EADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIF 347
E ++ H D RD R PG YDPRTLY+PP S +KQ+WE K K D ++F
Sbjct: 287 EPEQRHAWLEDIRDIDRNPPGHPDYDPRTLYIPPMAWTKFSPFEKQYWEIKQKLWDTIVF 346
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
FK GKFYEL+E DA +G + DL+ + G PE + M + KG++V V+Q
Sbjct: 347 FKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEMWANQFVAKGFKVARVDQ 406
Query: 407 TETPEQLELRRKE------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
ET +R ++ KG +DKV++RE+ V+T GTL +G +L + ++Y +A+ E
Sbjct: 407 QETALGKNMRERDEKSNMKKGKEDKVIRRELACVLTAGTLVDGTMLQDDM-STYCVAIKE 465
Query: 461 S--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
S + PA FG+ VD AT + + Q +DD D + +++ RP EI+
Sbjct: 466 SEIDNMPA-------FGVAFVDTATGQFHISQFVDDSDLTRFETFVAQTRPQEILLEKGE 518
Query: 519 LSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+S +T R IL++ P + N L P EFW+ ITA+ + +D
Sbjct: 519 VSMKTLR-ILKNNTGPTTIWNYLKPGKEFWEG------------HITAKEIEASD----- 560
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
P E++ ++SALG + YL+ ++ L+ F +
Sbjct: 561 ---------YFPMDWPEVLQQAREKDLLMSALGALICYLRTLNIERELVTLGNF-----T 606
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+ + W+ PL
Sbjct: 607 WYDPIRKATSLVLDGQTLINLEVFANSYDGGIEGTLFQLLNRCITPFGKRMFKQWVCHPL 666
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
++ I R DAV L + F +++LPD+ERL++R+ A S
Sbjct: 667 MDTKKINARLDAVDSL-NRDTKVRDRFTSQMTKLPDLERLISRVHAGS------------ 713
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSL--GAILENTESRQLHHILTPGKGLPAIVSIL 814
++Q+F+ L G E +D S L G N +S + L +P + L
Sbjct: 714 ------CKVQDFVKVLEGFEQIDHTMSLLRDGDAGSNLDSESVIGQLI--TAMPDLQPHL 765
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
K++ DAFD +A +G + P G++ D+D++ + I+ L + RK G + I Y
Sbjct: 766 KYWMDAFDRTKAKETGILEPERGIEEDFDNSKDTIDAIQDEFNVLLHKWRKEFGSSGICY 825
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
GK++ LEVP ++G +P++++ S+ K RY+ P ++ L+ +L +A+ +K
Sbjct: 826 RDSGKEIMQLEVPLKVKG-IPKNWDQMSATKQVKRYYFPELRSLVRKLQEAQETHSQIVK 884
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ R +F E + W + A L ++ SL A L SC E
Sbjct: 885 EVAGRFFARFDEKYEIWLAAIRIIAQLDCLI---SLAKASSSLGYPSCRPEF 933
>gi|448082468|ref|XP_004195147.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359376569|emb|CCE87151.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1245
Score = 310 bits (794), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 210/691 (30%), Positives = 343/691 (49%), Gaps = 65/691 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + +DA++R D YD RTLY+P + + +KQ+WE K K D
Sbjct: 302 FTKENEERYQWL-VNIKDAQKRPADDPEYDSRTLYIPQSAWSSFTAFEKQYWEIKCKMWD 360
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + E DL+ G + + G PE +F ++ GY+
Sbjct: 361 TVVFFKKGKFYELYENDAEIANTEFDLKLAGGGRANMKLAGIPEMSFEYWAKEFIDHGYK 420
Query: 401 VLVVEQTETPEQLELRRKEKGS--KDKVVKREICAVVTKGTLTEGELLSANPDAS-YLMA 457
V V+Q ET E+R GS ++K++KRE+ ++T GTLT+ ++ N D S Y ++
Sbjct: 421 VAKVDQKETLLAKEMR---GGSTKEEKIIKRELTGILTGGTLTDLNMI--NDDMSVYCLS 475
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ E + FGI VD ATS + L + DD +C+ L L+++++P EII N
Sbjct: 476 IREEILDNGC----KLFGIAFVDTATSEMNLVEFEDDQECTKLDTLITQVKPKEIICEKN 531
Query: 518 MLSPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
L + IL+ H+ N + N+L P+SEFWD +TT+ ++ +
Sbjct: 532 NLCSIATK-ILKFSSHSTNQIWNNLNPISEFWDYDTTLEKL------------------I 572
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
S E + L S L+ D A GG LFYL+ LD ++L +
Sbjct: 573 KGSYYEAEDLDDFSHYPSTLVQYKDEKKCAFHAFGGLLFYLRSLKLDSSILSLGNIKEYI 632
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
S +++LD +L NLEV NS G GTL+ +N +T FGKR+L+TWL
Sbjct: 633 ISK----NTATHLILDGVSLSNLEVLNNSFDGTDKGTLFKLINRAITPFGKRMLKTWLLH 688
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL + I ER D++ F K L+ LPD+ERLLAR+ +
Sbjct: 689 PLMDIKKINERYDSIDFFMNGGIEFKEMLEKTLNSLPDLERLLARIHGKT---------- 738
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
+ ++F+ + E + + SS+ +I K L +S
Sbjct: 739 --------LKFKDFLRVVESYESIAKLTSSIKDYDFTNTGALYSYISNIPKELETCIS-- 788
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
H++DAFD EA S I+P GVD ++D++ + + +EA L +HL+ RK I Y
Sbjct: 789 -HWEDAFDRTEA-LSDNIVPMKGVDSEFDNSSEALASLEAQLEEHLRTYRKEFKSNEICY 846
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
GK++YL+EVP ++ ++P D++ S RYW+P ++KL+ EL + + +
Sbjct: 847 KDSGKEVYLIEVPNKIK-NIPHDWQQMGSTSKVKRYWSPEVRKLVRELLEQRELHKMVCE 905
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++ R+ +F + ++ + + + A + ++
Sbjct: 906 TLKFRMYEKFEKDYSTYMRTLQILAKIDCLI 936
>gi|302890002|ref|XP_003043886.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724804|gb|EEU38173.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1201
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 224/724 (30%), Positives = 360/724 (49%), Gaps = 101/724 (13%)
Query: 290 DKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+K H P++R D +RR P + YD RT+Y+PP + S + Q+WE K
Sbjct: 272 EKAHVKEPEQRYPWLAKIMDKERRTPDNPEYDKRTIYIPPAAWKKFSPFETQYWEIKQNL 331
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA VG +E D + + G PE + V + K Y+
Sbjct: 332 WDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPESSLDYWVNQFIAKQYK 391
Query: 401 VLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
V V+Q ET E+R R++K K DK++ RE+ V+T GTL +G +L + ASY +A
Sbjct: 392 VARVDQMETNLGKEMRERQDKSGKKADKIITRELACVLTAGTLVDGGMLQDDM-ASYCVA 450
Query: 458 LTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
+ ES + PA FGI D AT R L +DD+D + L+++ P E++
Sbjct: 451 IKESVVDDLPA-------FGIAFADTATGRFYLSSFVDDVDLTKFETLIAQTGPRELVLE 503
Query: 516 ANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETT--------VLEIKNIYNRITAE 565
+ LS + R IL++ +P + L P +EFWDA+TT ++K+I + + E
Sbjct: 504 KSKLSTKALR-ILKNNTSPTTIWTHLKPDTEFWDADTTRRELGCGKYFKVKDIDDEVWPE 562
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+L Q D + V+SA+G + YL+ L+ LL
Sbjct: 563 ALQ---------QFRDDDI-------------------VMSAVGALVSYLRFLKLERPLL 594
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
FE + + K +VLD L NLEVF NS +G + GTL++ LN C+T FGK
Sbjct: 595 SQGNFE-----RYNPIQKNGTLVLDGQTLINLEVFSNSVNGGTEGTLFSLLNKCITPFGK 649
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFA 742
RL R+W+A PL N I ER DAV L +GV + FA + L ++PD+ERL++R+ A
Sbjct: 650 RLFRSWVAHPLCNIDRINERLDAVEMLNADQGVREDFASQ----LVKMPDLERLISRIHA 705
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ + ++F+ L G E ++ S LGA + + +++
Sbjct: 706 GA------------------CKPEDFVKVLEGFEQIEYTMSLLGAF--KGGNGLVDRLIS 745
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+P + L ++ AFD +A + +IP G++ D+D + +++EI+ L + L E
Sbjct: 746 ---SMPNLEEPLSFWRSAFDRRKARDDKLLIPERGIEEDFDESADRIEEIKQQLDELLAE 802
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
++K + Y +GK++Y LE P+S++ VP ++ S+ K RY+ P + +L+ EL
Sbjct: 803 KKKEFKCKLLNYRDVGKEIYQLEAPKSVK--VPSNWRQMSATKDVKRYYFPQLSQLVREL 860
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+AE ++ + R +F + W Q + + L ++ SL A L SC
Sbjct: 861 QEAEETHSQLVRDVASRFFKKFDVDYETWLQAIKIISQLDCLV---SLAKASASLGHPSC 917
Query: 983 SSEM 986
++
Sbjct: 918 RPQL 921
>gi|149246718|ref|XP_001527784.1| hypothetical protein LELG_00304 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447738|gb|EDK42126.1| hypothetical protein LELG_00304 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1320
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 203/693 (29%), Positives = 355/693 (51%), Gaps = 64/693 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + +DA++R P YDPRTLY+P + +KQ+WE KS+ +
Sbjct: 343 FAKENEERYQWL-VNIKDAQKRTPDHPEYDPRTLYIPQLAWSKFTAFEKQYWEIKSQMWN 401
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 402 TVVFFKKGKFYELYENDAIIANTKFDLKIAGGGRANMKLAGIPEMSFEHWAKEFISHGYK 461
Query: 401 VLVVEQTETPEQLELRRKEKGS--KDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
V V+Q E+ E+R G+ ++K++KRE+ ++T GTLT+ +++S + ++Y +++
Sbjct: 462 VAKVDQKESMLAKEIRGGAPGATKEEKIIKRELTGILTGGTLTDLDMISDDM-STYCLSI 520
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPAN 517
E + FG+ VD +TS + L ++ DD +C+ L L+++++P EII + N
Sbjct: 521 KEEQMEDGK---GKKFGVAFVDTSTSELSLIELEDDTECTKLDTLVTQIKPKEIICEKGN 577
Query: 518 MLSPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSN 573
+ S T+ IL+ H+++ + N + P++EFWD + T+ + +K+ Y AE+L
Sbjct: 578 LCSIATK--ILKFCAHSKHQIWNHMNPITEFWDVDITLEQLVKSRY--FEAENL------ 627
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
D + P +L + D +A GG L YLK LD++++ +
Sbjct: 628 --------DDFSKYPDVLVKFKENHDVA---FNAFGGLLSYLKTLKLDQSIMSLGNIKEY 676
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
S + +M+LD L NLE+ N+ G GTL+ LN T FGKR L+ W+
Sbjct: 677 KIS----LNANSHMILDGITLNNLEILHNNYDGGDQGTLFKLLNQATTPFGKRQLKKWVL 732
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL S I R D+V L G + L+ LPD+ERL+AR+ + +
Sbjct: 733 HPLIKSEDINARFDSVEYLMGDGLELRSILQDTLANLPDLERLIARIHSGT--------- 783
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVS 812
+ +EF+ + E + + S L N E LH L + P A+ S
Sbjct: 784 ---------LRFKEFLRVIESFEKIAKVLSQLLE-FTNVECGVLHKYL---RNFPQAMSS 830
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
+ + DAFD VEA + I+P G+D ++DS+ + ++EA L + LKE ++ I
Sbjct: 831 HIGEWDDAFDRVEAKQN-IIVPAAGIDEEFDSSISIINDLEAQLNQQLKEYKREYRSQEI 889
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
Y GK++YL+E+P + +VP ++ + R+W+P +K++ +L + +S
Sbjct: 890 CYRDSGKEVYLIEMPVKVAKNVPLSWQTMGATSKVKRFWSPKVKQMARKLMEQRELHKSV 949
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++ QR+ +F +H+ W +++ A + I+
Sbjct: 950 CDTLKQRMYNKFDKHYQTWMKVITCMANIDCIV 982
>gi|398409676|ref|XP_003856303.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
gi|339476188|gb|EGP91279.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
Length = 1199
Score = 309 bits (792), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 208/690 (30%), Positives = 343/690 (49%), Gaps = 68/690 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
DA R YDPRT+Y+PP S +KQ+WE K MD ++FFK GKFYEL+E D
Sbjct: 281 DADRNPTDHADYDPRTIYIPPMAWNKFSAFEKQYWEIKQNFMDTIVFFKKGKFYELYEND 340
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KG+++ V+Q E+ ++R ++
Sbjct: 341 ATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARVDQMESKLSKDMRERD 400
Query: 420 KGS---KDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
G +DK+++RE+ AV+T GTL +G +L + A+Y A+ E+ + FGI
Sbjct: 401 GGGGKKEDKIIRRELAAVLTGGTLVDGGMLQDDM-ATYCAAIKETEVDGMPK-----FGI 454
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-RNPL 535
VD AT++ L + +DD+D + ++++RP EI+ +S + R + +T +
Sbjct: 455 AFVDTATAQFQLSEFVDDIDMTRFETFVAQIRPGEILLEKGCVSAKALRILKNNTPVTTI 514
Query: 536 VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELI 595
N L P EF A+ T ++I + ++E + P L E
Sbjct: 515 WNHLKPDKEFLTADKTRMKI---------------NGEGYFEKSEDEAADAWPKALRE-- 557
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG---DMAKKPYMVLDAP 652
ALG ++YL ++L+ + +LL C F + K +VLD
Sbjct: 558 --ASEKEVAFPALGALIWYL-------SMLKIER-DLLTCGNFAWYEPIRKSSSLVLDGQ 607
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
+L NLE+F N+ G + GTL++ LN CVT FGKR+LR W+ PL ++ I R DAV L
Sbjct: 608 SLINLEIFANTFDGSAEGTLFSMLNRCVTPFGKRMLRQWVCHPLGDARKINLRFDAVDAL 667
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ F +LSRLPD+ERL++R+ A + + Q+F+ L
Sbjct: 668 NA-DGTVMDRFTSSLSRLPDLERLISRIHA------------------GRCRPQDFLKVL 708
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
G E ++ S LG+ + L ++ +P + L+H+KDAFD +A + G
Sbjct: 709 EGFEQIEYTMSILGSFGDG--DGLLGQLIV---AMPNLAGALEHWKDAFDRTKAKDEGLF 763
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
IP GV+ D+D + + + + L K L + RK +G +SI + GK++Y LEVP G
Sbjct: 764 IPQPGVEEDFDESQEVIDNVLKELNKLLVKARKDIGSSSIKFTDNGKEIYQLEVPIKACG 823
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
+P++++ S+ K R+++P +++L+ +L +A+ +K++ R +F +N W
Sbjct: 824 KIPKNWKQMSATKQCKRWYSPELEELVQDLKEAQEVHGQVVKALAGRFFARFDIDYNTWL 883
Query: 953 QMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ A L ++ SL L S SC
Sbjct: 884 AALKVIAQLDCLI---SLAKTSASLGSPSC 910
>gi|428185652|gb|EKX54504.1| Msh6 mismatch repair muts-like protein, meiosis and mitosis
[Guillardia theta CCMP2712]
Length = 1322
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 272/942 (28%), Positives = 441/942 (46%), Gaps = 137/942 (14%)
Query: 120 WYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKR--------LRRDS 171
WY+G + +D+ VQ++DG+++ + + E + +Q++ +R R S
Sbjct: 127 WYQGKITRYDRASQLWHVQFEDGDEDDVRIPSEDVMVLQQAEENAERDVPKTRRSTRSCS 186
Query: 172 FKKVVVE-----DDEEMENVEDE-------------ISDDRSDSSDDDWN---------- 203
K + VE D E+ DE + D S+ D +
Sbjct: 187 TKAMRVEKKYTFDPSSSESESDEKDRQTKRRRIRRVVESDNSEGEDRSYEVPQANSMEEE 246
Query: 204 ------KNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNA----DFK 253
+ +DV E D E E+ K+K V KS++ G+ ++ K
Sbjct: 247 EDSSSDEETEAQDVRSSEAADESMEVED----SPKKKQPVVNKSQTKGSRTSSGSVGSLK 302
Query: 254 SPIIKPVKIFGSDKLSNGFDNPVMG--------DVS---ERFSAREADKFHFLGPDR--- 299
S I+ K G ++ + P G D+S ER ARE KF + +R
Sbjct: 303 SLILPASKASGKERSA-----PTAGSSRSKKQIDLSPSEERRLARET-KFEAINQERYKW 356
Query: 300 ----RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYE 355
+D+ +RPG+ YDPRTLY+P + ++ ++Q+W+ K ++ D V+FFK GKFYE
Sbjct: 357 LEDVKDSSGKRPGEDGYDPRTLYIPSSAYSSFTQFERQFWDIKRENFDVVLFFKKGKFYE 416
Query: 356 LFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
+FE DA +G K L L+ + + CG PE FS +L +G++V VEQ ET ++
Sbjct: 417 MFEGDADIGHKHLHLKLTDRVKMRMCGIPEGQFSTYATRLVARGFKVGRVEQMETLNAMQ 476
Query: 415 LRRKEKGSKDK--VVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDR 472
R K G K V +RE+C ++T+GTL + +LS+ P A+Y++ ++ +QS
Sbjct: 477 KRAKSNGVKQGSLVCERELCQILTQGTLVDESMLSS-PQANYMLTVSVESQSSTH----- 530
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
GIC+++ +T LG+V DD + +L + +P E++ P L+ I RH
Sbjct: 531 -MGICLLEASTGYFYLGEVEDDEMRTQFETVLLKAKPKEVVYPKGCLNKICLNMIRRHLD 589
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
NP++N L P +FWD + TV E++N + DS+ NS ++G LP L+
Sbjct: 590 NPILNALQPGEQFWDHQRTVTELEN--GSYFSSPTEDVDSSHGNS-SKG-----LPEQLN 641
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
+++S + LSALGG + YL+ LD L+ F P F D + K +++D
Sbjct: 642 QMVS--ERKESALSALGGAVCYLRSLKLDMELVSMKNFR--PLQEF-DGSSKSSLIIDGQ 696
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L NLEV EN SG + GTL L+ C TAFGKR R W+ PL + I R DA
Sbjct: 697 TLCNLEVIENC-SGGTEGTLLKFLDRCSTAFGKRKFRNWVCSPLQDVSAINLRLDAAEFF 755
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ E + L +LPD+ER L+R+ +G + V+++D + ++L+ F+ L
Sbjct: 756 S--SSSVRKEIQAKLKKLPDVERHLSRV----HMHGTARKQGVMFDDTSARKLRLFLQLL 809
Query: 773 HGCELMDQACSSLGAILENTE---SR---QLHHILTPGKGLPAIVSILKHFKDAF-DWVE 825
+++ + + + E+ + SR +L H+ P + L FK ++ D +
Sbjct: 810 ESLDVVCEIAELVQGLKEDGDESGSRAAPRLPHVDFPQD----LRGTLSKFKGSYGDLRK 865
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL--------------KEQ--RKLLGD 869
A G I P GV DYD A ++K IE L K Q +K LG+
Sbjct: 866 AMEDGFITPESGVYQDYDKAMDRLKGIEKFFEDELLVRPVSLYLVPSNGKSQGWKKKLGE 925
Query: 870 TSITYV--TIGKDLYLLEVPESL----RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
S+ + G++ Y +E P S + D+EL+S RYWT +I++ + EL
Sbjct: 926 PSLRFWHPAAGREPYQIEFPSSFFEERNKKLSNDFELKSQTSKVKRYWTDSIREKVSELV 985
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
A + + +R+ F ++N W Q V A A L ++
Sbjct: 986 DARETLDEIRSGMSRRMQIDFDSNYNVWSQAVEACAHLDCLI 1027
>gi|440794306|gb|ELR15471.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1150
Score = 309 bits (791), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 213/694 (30%), Positives = 349/694 (50%), Gaps = 75/694 (10%)
Query: 293 HFLG-PDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
H++G +++DA+ R D YDP TL++P L ++ Q+Q+WE K +H DK+IF + G
Sbjct: 164 HWIGEANQKDAQGRSRDDPAYDPSTLFIPRKDLEGMNTFQRQYWEIKKQHWDKIIFCRNG 223
Query: 352 KFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
F+EL+E DA + + LD++ G E F KL GY+V+ VEQ +
Sbjct: 224 VFWELYEKDAEISHRLLDIKLADPGAMGMLTAGVFENAFDPYAAKLIALGYKVVKVEQMQ 283
Query: 409 --TPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
T + R + ++ ++ ++ +++ GTL + ++ + A YL+A+ E + P+
Sbjct: 284 ANTKSSEKKNRPKDQARTNFIQLQVTRILSPGTLVD-DIYIDDERAIYLLAVKEKWE-PS 341
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII----KPANMLSPE 522
S +G+C VD AT + +GQ DD D + LL +++P EI+ P + SP+
Sbjct: 342 GDSELPSYGVCFVDTATGEVNVGQFQDDRDRTQFETLLLQIKPREILYEKEGPTALCSPQ 401
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
T + I R+ P + P +FW+A TT A+ L AD +
Sbjct: 402 TLQLIKRNVNQPTLTRRRPGDQFWNASTT------------ADFLAGADYFAGGDRE--- 446
Query: 583 GLTCLPGILSELIS---TGDSGSQV-LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
P +LS+L+ GS++ LSA GG + YLK+ +LD+ +L + + + F
Sbjct: 447 ----WPPVLSQLLKDHREAREGSELCLSAFGGVVSYLKELYLDKEVLAQGRIKTYAGTTF 502
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
P +VLD+ ++NLE+FEN+ G + GTL ++HC T FGKRL + WLA PL
Sbjct: 503 ----DSPNLVLDSKTIKNLEIFENTVDGKTEGTLLKLMDHCSTPFGKRLFKRWLAMPLKR 558
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKA----LSRLPDMERLLARLFASSEANGRNSNKV 754
I ERQ+AV G ++ + + A L LPD+ER+++R+ A S
Sbjct: 559 IHEIEERQNAVEDFNG-SEDHSTTLKDAVALNLKGLPDLERIVSRIHAGSSP-------- 609
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
+ F+SAL +L+ S L ++ S++L +LT GKG P I L
Sbjct: 610 ----------ILTFLSALDAFDLLWNMVSELQPLIGQLRSKRLAFLLTVGKGFPDIAPQL 659
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
++F AFD +A + R+I GVD ++D+A +KV+ IE L +HL++ ++ +G + + Y
Sbjct: 660 EYFSRAFDRDQAKSEQRLILRPGVDEEFDAAREKVETIEQQLQQHLEDLKEEVGISDMAY 719
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF---------RYWTPNIKKLLGELSQA 925
T+ YL+E+P + + ++ K F RYWTP I L +L +A
Sbjct: 720 ATVRNKEYLIEIPRTPKNEAA----IKRHKSTFIPINDTKSVGRYWTPTISALFADLEKA 775
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
++ E + R +F E+H +W VA A
Sbjct: 776 RTDLERCRLGLFARNQQKFSENHREWSLAVACMA 809
>gi|67522503|ref|XP_659312.1| hypothetical protein AN1708.2 [Aspergillus nidulans FGSC A4]
gi|40745672|gb|EAA64828.1| hypothetical protein AN1708.2 [Aspergillus nidulans FGSC A4]
gi|259487049|tpe|CBF85409.1| TPA: protein required for mismatch repair in mitosis and meiosis
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1186
Score = 308 bits (790), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 211/694 (30%), Positives = 353/694 (50%), Gaps = 74/694 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD GD YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 264 RDIDGHPIGDPEYDPRTLYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEN 323
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + + KG+++ V+Q+E+ E+R +
Sbjct: 324 DATIGHQLFDLKLTDRVNMRMVGVPESSLDHWANQFVAKGFKIARVDQSESALGKEMRER 383
Query: 419 E----KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
+ G ++K+++RE+ V+T GTL EG +L + +++ +A+ E+ PA
Sbjct: 384 DGKKGGGKEEKIIRRELACVLTAGTLVEGAMLQDDM-STFCVAIKEAIIENLPA------ 436
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL++
Sbjct: 437 -FGIAFVDTATGQFFLTEFVDDVDMTKFETFVAQTRPQELLLEKSTVSQKALR-ILKNNT 494
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
P + N L P EFW+A+ TV E+ D++ + D + P
Sbjct: 495 GPTTIWNYLKPGKEFWEADITVREL---------------DASEYFVSQDNDNIHAWP-- 537
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
E + V+SA G + YL+ L+ L+ F S + + K +VLD
Sbjct: 538 --EALRQARDKELVMSAFGALVQYLRLLKLERDLITIGNF-----SWYDPIKKASSLVLD 590
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L N+E+F NS G GTL+ LN C+T FGKR+ + W+ PL + I R DAV
Sbjct: 591 GQTLINMEIFANSFDGGVDGTLFQLLNRCMTPFGKRMFKQWVCHPLVDPQRINARLDAVD 650
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L + +F L+++PD+ERL++R+ A AN R Q+F+
Sbjct: 651 AL-NADSSVRDQFASQLTKMPDLERLISRIHA---ANCR---------------AQDFVR 691
Query: 771 ALHGCELMDQACSSLGAILENTESRQ--LHHILTPGKGLPAIVSILKHFKDAFDWVEANN 828
L G E ++ S +L+++ S + + ++ K +P + +L+++K AFD +A
Sbjct: 692 VLEGFEQIEYTMS----LLKDSGSGEGVIGQLI---KSMPDLTELLEYWKTAFDHNQAKE 744
Query: 829 SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE 888
SG ++P GV+ D+DS+ + ++++ L LK R+ LG T+I Y GK++Y +EVP
Sbjct: 745 SGILVPKPGVEEDFDSSQETIRQLHQDLDDLLKRTRRELGSTAICYRDNGKEIYQMEVPI 804
Query: 889 SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
++ ++PR+++ S+ K RY+ P ++ + +L +A+ +K + +R +F EH+
Sbjct: 805 KVK-NIPRNWDQMSATKQVKRYYFPELRTTIRKLQEAQETHSQIVKEVSKRFYARFDEHY 863
Query: 949 NKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ W V + L ++ SL A L SC
Sbjct: 864 STWLSAVRVVSQLDCLI---SLAKASSSLGEPSC 894
>gi|46126343|ref|XP_387725.1| hypothetical protein FG07549.1 [Gibberella zeae PH-1]
Length = 1210
Score = 308 bits (790), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 220/708 (31%), Positives = 351/708 (49%), Gaps = 78/708 (11%)
Query: 290 DKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+K H PD+R D +RR+P D YD RT+Y+PP S + Q+W+ K
Sbjct: 282 EKAHTRDPDQRYPWLANIMDKERRKPDDPEYDKRTIYVPPGAWNKFSPFETQYWKIKQNL 341
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA VG +E D + + G PE + V + K Y+
Sbjct: 342 WDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPESSLDYWVNQFIAKQYK 401
Query: 401 VLVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
V V+Q ET E+R ++ SK DK++ RE+ ++T GTL +G +L + ASY +A+
Sbjct: 402 VARVDQMETNLGKEMRERQDKSKKADKIITRELACILTAGTLVDGGMLQDDM-ASYCVAI 460
Query: 459 TES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
ES + PA FGI D AT R L +DD+D + L+++ P E++
Sbjct: 461 KESVVDDLPA-------FGIAFADTATGRFYLSSFVDDVDLTKFETLIAQTGPRELLIEK 513
Query: 517 NMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
+ LS + R IL++ +P + L P +EFWDA+TT E LN A+
Sbjct: 514 SHLSTKALR-ILKNNTSPTTIWTHLKPGTEFWDADTTRRE------------LNTANYFK 560
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+ E L G+ + + ++SA G + YL+ ++ LL FEL
Sbjct: 561 TDDADEEVWPEALQGLRDDDV--------IMSATGALISYLRFLKVEGPLLSQGNFEL-- 610
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ + K ++LD L NLEVF NS +G S GTL++ LN CVT FGKRL R+W+A
Sbjct: 611 ---YNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTPFGKRLFRSWVAH 667
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL N I ER DAV L +Q +F L ++PD+ERL++R+ A
Sbjct: 668 PLCNIDRINERLDAVEMLNA-DQTVREQFASQLVKMPDLERLISRIHAG----------- 715
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
A K ++F+ L G E ++ LG+ + + +++ +P + L
Sbjct: 716 -----ACKP--EDFVKVLEGFEQIEYTMGLLGSY--KGGNGLVDRLIS---SMPDLDEPL 763
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
+++ AFD +A + +IP G++ D+D + ++ EI+ L L E++K + +
Sbjct: 764 SYWRTAFDRNKARDEKILIPERGIEDDFDQSSDRIDEIKQQLEDLLAEKKKEFKCKLLKF 823
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
+GK++Y LE P+S++ VP + S+ K RY+ P++ +L+ EL +AE ++
Sbjct: 824 THVGKEIYQLEAPKSVK--VPSSFRQMSATKDVKRYYFPDLSQLVRELQEAEETHSQLVR 881
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ R +F ++ W + + L ++ SL A L SC
Sbjct: 882 EVASRFFQKFDVDYDTWLSAIKIISQLDCLV---SLAKASASLGQPSC 926
>gi|322699711|gb|EFY91470.1| DNA mismatch repair protein msh6 [Metarhizium acridum CQMa 102]
Length = 1220
Score = 308 bits (790), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 288/1024 (28%), Positives = 453/1024 (44%), Gaps = 177/1024 (17%)
Query: 18 QRQITSFFSKSN-------------SPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
QR I SFF KS+ SP P + K+NS P P P++ + TP PS
Sbjct: 31 QRSIMSFFQKSSPVARSSPAAREKVSPDPQHSSCLQETTKANSLPKPKPSTKLS-TPVPS 89
Query: 65 PSPTTPSPLQSNP---KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWY 121
P Q N ++ SP TP + DV K ++ P K
Sbjct: 90 SDAIEPPSSQENAGSVSATKTTSRNLLSPTTMTPRTRST--NDVTPKAVQCGTPTRK--- 144
Query: 122 EGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVVEDDE 181
K +V Y + D+ +E + S + R RR V+D++
Sbjct: 145 -----------TKKIVSYAESSDD-----EEPFNYSSRSQTRRGRARR------TVKDED 182
Query: 182 EMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS 241
E + ED ++ S +DD + +D N + R +KRK
Sbjct: 183 EFD--EDGVA---SQEEEDDMGDFIASDD-------------SNDLPRTKKRKRPA---- 220
Query: 242 KSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDV--------------------- 280
A A +S + P + + D+ +M D+
Sbjct: 221 ----KAATARKRSNVSPPADTRQESPIHD-VDDELMTDIPTTSTTSQWNYDPESTEKRPV 275
Query: 281 ---SERFSARE---ADKFHFLGP-DR-------RDAKRRRPGDVYYDPRTLYLPPDFLRN 326
+ER +A++ +K H P DR RD ++R P D YDPRT+Y+PP
Sbjct: 276 VTPAERAAAKDPKRKEKAHTKEPEDRYPWLANIRDKEKRAPSDPEYDPRTIYIPPMAWNK 335
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPER 385
S +KQ+WE K D ++FFK GKFYEL+E DA +G +E D + + G PE
Sbjct: 336 FSPFEKQYWEIKQNLWDTIVFFKKGKFYELYENDATIGHQEFDFKMTDRVNMRMVGVPES 395
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVKREICAVVTKGTLTE 442
+ V + K Y+V V+Q ET E+R ++ S DKV+ RE+ V+T GTL +
Sbjct: 396 SLDHWVNQFIAKQYKVARVDQMETNLGKEMRERQDRSGKKADKVISRELSCVLTAGTLVD 455
Query: 443 GELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
G +L + A+Y +A+ ES + PA FGI D AT R L DD+D +
Sbjct: 456 GSMLQDDM-AAYCVAIKESVVDDLPA-------FGIAFADTATGRFQLSGFTDDVDLTKF 507
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNI 558
++++ P E++ + LS R IL++ +P + L P SEFWDA+T+ E+K
Sbjct: 508 ETFVAQIAPRELLIEKSHLSTRALR-ILKNNTSPTTIWTHLKPGSEFWDADTSRRELK-C 565
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
N T + + E D + E++ V+SA+G + YLK
Sbjct: 566 GNYFTTQ------------EGEDD-------VWPEVLQQYKDDDLVMSAVGALVSYLKFL 606
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
L+ LL FE + + K +VLD L NLE+F N+ +G S GTL++ LN
Sbjct: 607 QLERPLLSQGNFE-----KYSPIQKNGTLVLDGQTLVNLELFSNTSNGSSEGTLFSLLNK 661
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
C+T FGKRL R W+A PL + I ER DAV L + +F L ++PD+ERL++
Sbjct: 662 CITPFGKRLFRQWVAHPLCDIQRINERLDAVDML-NADPTVREQFASQLVKMPDLERLIS 720
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R+ A A K ++F+ L G E ++ L A + +
Sbjct: 721 RIHAG----------------ACKP--EDFVRVLEGFEQIEFTMGLLQAF--KGGNGLVD 760
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
+++ +P + L ++K AFD +A +IP G++ D+D + +++EI+ L
Sbjct: 761 RLIS---SMPNLEEPLTYWKTAFDRRKAREDKILIPARGIEPDFDDSLNQMEEIKDQLND 817
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
L E++ L ++ + +GK++Y +E P+S++ VP + S+ K R++ P + +L
Sbjct: 818 LLSEKKGELKCRTLKFTDVGKEIYQIETPKSVK--VPSSWRQMSATKDVKRWYFPQLTQL 875
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQ 978
+ EL +AE ++ I RL +F +N W + A L ++ SL A L
Sbjct: 876 VRELQEAEELHSQLVREIASRLFQKFDVDYNTWLLAIKIVAQLDCLV---SLAKASNALG 932
Query: 979 SNSC 982
SC
Sbjct: 933 QPSC 936
>gi|190346907|gb|EDK39095.2| hypothetical protein PGUG_03193 [Meyerozyma guilliermondii ATCC
6260]
Length = 1198
Score = 308 bits (790), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 215/692 (31%), Positives = 343/692 (49%), Gaps = 72/692 (10%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + RDA++R D YDPRTLY+P + +KQ+WE K D
Sbjct: 263 FAKENEERYQWL-VNVRDAEKRTMDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKGVMWD 321
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + E DL+ G + + G PE +F ++ GY+
Sbjct: 322 TVVFFKKGKFYELYENDATIANSEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 381
Query: 401 VLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V V+Q E+ E+R G+K+ K++KRE+ V+T GTLT+ +LS + ++Y +++
Sbjct: 382 VAKVDQKESLLAKEMRGG--GTKEEKIIKRELTGVLTGGTLTDLNMLSDDM-STYCLSI- 437
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
+ D FG+ VD ATS + Q DD +C+ L L++ +RP E+I + L
Sbjct: 438 --------KQFDNWFGVVFVDTATSELNFYQFEDDNECTKLETLVTHVRPKEVICEKHNL 489
Query: 520 SPETERAILRHTRNP---LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
S T IL++T P + N L P +EFWD +TT L K S+
Sbjct: 490 S-STATKILKYTAQPSNQIWNTLNPNTEFWDYDTT---------------LEKLVSSKYY 533
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P LI+ D SA GG L YLK LD ++ +
Sbjct: 534 DATDLDDFSNYP---DALIAFKDKNQYAFSAFGGLLSYLKFLKLDHNIMTMGNIREYQIT 590
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
AK M+LD L NLE+ NS G GTL+ LN + FGKR+L+ W+ PL
Sbjct: 591 TRS--AKN--MILDGITLNNLEILTNSFDGSDKGTLFKLLNRAQSPFGKRMLKNWVLNPL 646
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
S I +R D+V L G K+LS LPD+ERL+AR + +
Sbjct: 647 MVSSDINDRLDSVEYLMGEGAEIKDILEKSLSGLPDLERLIARTHSKN------------ 694
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR--QLHHILTPGKGLPA-IVSI 813
+ ++F+ + G E + C +L + + + L+ L +G P + S
Sbjct: 695 ------IKFKDFLKLIEGFE---KVCGTLQNLKDFVKESCGSLYKYL---QGFPTELKSC 742
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
+ ++DAFD EA N ++P GVD +D++ ++K++E L +HL++ +K I
Sbjct: 743 VNEWEDAFDRSEALND-VVVPATGVDESFDASSDRMKKLEDILNEHLRKYKKEYRSNEIC 801
Query: 874 YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
Y GK++YL+EVP ++ ++P D+ S R+W+P +KKL EL + +
Sbjct: 802 YKDSGKEIYLIEVPNKVK-NIPSDWHQMGSTSKVKRFWSPEVKKLARELMEQRETHKMVC 860
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+++ R+ +FC+H+ W+ + A + I+
Sbjct: 861 ETLRFRMYERFCKHYKVWKSTIHVLANIDCII 892
>gi|50557004|ref|XP_505910.1| YALI0F26499p [Yarrowia lipolytica]
gi|49651780|emb|CAG78722.1| YALI0F26499p [Yarrowia lipolytica CLIB122]
Length = 1149
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 229/716 (31%), Positives = 350/716 (48%), Gaps = 75/716 (10%)
Query: 278 GDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEF 337
G F+ +++ +L D +DA+ G YDPRTLY+P + +KQ+WE
Sbjct: 223 GGKHSEFAKNNTERYKWL-IDIKDAQGNPEGSPDYDPRTLYIPSSAWSKFTAFEKQYWEV 281
Query: 338 KSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKL 394
KSK + V+FFK GKFYEL+E DA + E DL+ G + + CG PE +F
Sbjct: 282 KSKMWNTVVFFKKGKFYELYERDADIAHSEFDLKLAGGGRANMRLCGVPEMSFFSWSNAF 341
Query: 395 ARKGYRVLVVEQTETPEQLELRRKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDAS 453
+ G++V V+Q E+ E+R K DKV+KRE+ V+T GTLT+ ++L+ + A+
Sbjct: 342 IKNGHKVARVDQKESALAKEMRETATLKKEDKVIKRELSLVLTSGTLTDEKMLTTDL-AT 400
Query: 454 YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
Y MA+ + A + VD A+ DD D S L++++RP E++
Sbjct: 401 YCMAVKQEGSRIA---------VAFVDTASGAFHTSSFEDDADFSKFETLVAQIRPGEVL 451
Query: 514 KPANMLSPETERAILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS 572
++ + + R+T N L N L+P +EFWDA TT +E AE L
Sbjct: 452 LEKGIIDKAVVKILKRNTTINTLWNYLIPKAEFWDA-TTAMEQLTRGKYFEAEDL----- 505
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
D ++ P L I +SA G L+Y++ LD+ EL
Sbjct: 506 ---------DDMSNYPEHLKSFIE----DDVCMSAFGALLWYMQYLKLDK--------EL 544
Query: 633 LPCSGFGDM--AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ F D + YMVLD +L+NLEVF NS +GTL+ LN CV+ FGKRLL+
Sbjct: 545 VSLGNFSDYEPIQSEYMVLDGHSLQNLEVFANSYDSTDAGTLFKLLNKCVSPFGKRLLQQ 604
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+A PL + I R DAV + F +E R L++LPD+ERLLAR+ A GR
Sbjct: 605 WVALPLLDQVKIEARLDAVEAF--MEDDFGIERR--LAKLPDLERLLARIHA-----GRI 655
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
K +F+ + G E + ++L + ES L I T + LP +
Sbjct: 656 MPK-------------DFVRVVEGFEEVYHMVAALSE--KAPESAPL--IRTLIESLPNL 698
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
++L + FD +A G +IP GV+ D+D++ +K +E L L+E RK
Sbjct: 699 ETMLVPWDTKFDRQKAKE-GLLIPEPGVETDFDASQGTIKGLEDELMVKLREYRKEYKSQ 757
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
I + GK++YL+E+P L +P ++ S R+W+P +K L+ +L +A + +
Sbjct: 758 EIKFYDSGKEIYLIEMPVKLVKQIPNSWQQMSGTAKVKRFWSPEVKALVRKLMEAREDHK 817
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ ++ +R+ QF EH++ W + V A L +L SL L S SC E
Sbjct: 818 TIEAAMERRMYAQFDEHYSSWLRCVEVCAQLDCLL---SLAKCSQTLGSPSCRPEF 870
>gi|296811026|ref|XP_002845851.1| DNA mismatch repair protein msh6 [Arthroderma otae CBS 113480]
gi|238843239|gb|EEQ32901.1| DNA mismatch repair protein msh6 [Arthroderma otae CBS 113480]
Length = 1216
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 216/713 (30%), Positives = 351/713 (49%), Gaps = 82/713 (11%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P+ R D + G YDPRTLY+PP S +KQ+WE K K
Sbjct: 272 KAHMTEPENRYPWLANIMDMDKNPIGHPDYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFW 331
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D ++FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 332 DTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 391
Query: 402 LVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGELLSANPDAS 453
V+Q+E+ E+R R++KGSK DKV+KRE+ V+T GTL EG ++ + ++
Sbjct: 392 ARVDQSESALSKEMREREDKGSKMGKAQKEDKVIKRELACVLTTGTLVEGSMIQGDM-ST 450
Query: 454 YLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
Y +A+ E+ + PA FGI VD AT + L + +DD+D + +++ RP E
Sbjct: 451 YCVAIKEAIVDGLPA-------FGISFVDTATGQFFLSEFIDDVDMTRFETFVAQTRPQE 503
Query: 512 IIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
++ +++S + R IL++ +P L N L P+ EFW+A+ TV E+ E
Sbjct: 504 LLLEKSVMSTKALR-ILKNNTSPTTLWNYLKPVKEFWEADMTVRELN------AGEYFGP 556
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D + L P +L + V+SA G L YL+ + L+
Sbjct: 557 GDQS---------NLETWPHVLRD----AQDKDLVMSAFGALLQYLQMLKIGRDLVTIGN 603
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + + + K +VLD L NLE+F N+ G S GTL+ LN CVT FGKRL +
Sbjct: 604 F-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFK 658
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
W+ PL + I R DAV L N +F L+++PD+ERL++R+ A +
Sbjct: 659 QWVCHPLVDIAKINARLDAVESLNADNT-VREQFSSQLTKMPDLERLISRIHAGT----- 712
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+ Q+F+ L G E Q ++G + L L +P
Sbjct: 713 -------------CKAQDFVRVLEGFE---QIEYTMGLLKGAGSGHGLIGQLI--SAMPD 754
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S+L+ ++ AFD +A SG ++P G++ ++D++ + + ++E L + L RK L
Sbjct: 755 LNSLLRFWETAFDRPKARESGILVPEEGIEEEFDASKENIDQLEEKLQQVLHRVRKELKC 814
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+ +L +A
Sbjct: 815 STIVFKDNGKEIYQLEVPIKVK-NIPKSWDQMSATKQVKRYYFPELRALIRKLQEARETH 873
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+K + R +F E+++ W V A L ++ L A L SC
Sbjct: 874 AQVVKGVAGRFYARFDENYSSWLAAVKIIAQLDCLI---GLAKASTALGHPSC 923
>gi|312072605|ref|XP_003139141.1| hypothetical protein LOAG_03556 [Loa loa]
gi|307765695|gb|EFO24929.1| hypothetical protein LOAG_03556 [Loa loa]
Length = 1204
Score = 308 bits (789), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 215/727 (29%), Positives = 354/727 (48%), Gaps = 84/727 (11%)
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
F FL PDR RDA +R Y PRTLY+P F++ + G +QWW KS + D ++FFK+
Sbjct: 213 FEFLQPDRIRDADKRLRSHPDYCPRTLYVPDAFMKKQTPGHRQWWAAKSAYFDTILFFKV 272
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYE++ MDA +G + L+L YM+G HCGFPE + ++L +GY+V VEQTETP
Sbjct: 273 GKFYEMYHMDAVIGVENLNLNYMRGSFAHCGFPEVAYGRFADQLVNRGYKVARVEQTETP 332
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD----------ASYLMALTE 460
QLE R K + + DKVV+RE+C + T GT T G +L N + A YL A+ E
Sbjct: 333 TQLESRNKIEKANDKVVRREVCNITTPGTRTYG-VLDGNDEQSTVDVMDTTARYLYAVAE 391
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+G+C +D R +G + D + S L L S +P +I+ +S
Sbjct: 392 RGTESVQ------YGVCFIDTTVGRFYIGCLSDGSNRSALRTLFSHYQPAQILYERGRVS 445
Query: 521 PETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
T + T + + + L P EF +E T+ +A+ +
Sbjct: 446 AST-MTVYNSTVSAVPKEALFPKKEFLTSEDTL-------------------KLLADDKY 485
Query: 580 EGDGLTCLPGILSELI-------STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
G P +L ++I + +SALG ++YL++ F+D ++ +FEL
Sbjct: 486 FGKLYDKWPVVLLDMIDRDSLIPKCNPAYDACVSALGAIIWYLRRCFVDVDMISMRRFEL 545
Query: 633 L-PCSGFGDMA-------------KKPYMVLDAPALENLEV---------FENSRSGDSS 669
P + G ++ + ++LD+ L++L + F +
Sbjct: 546 YKPMNLTGPLSHDKDEIEVGVHYWRGRRLILDSLTLKHLNIIPPIGSMKKFAPRDPITTK 605
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV-----AGLRGVNQPFALEFR 724
TLY +N C T GKRLLR W+ P+ + ++ RQDA+ A L+G F + R
Sbjct: 606 YTLYNVINKCATPAGKRLLRQWVCAPVCDQEILSSRQDAIEWLSEARLKG----FIDKAR 661
Query: 725 KALSRLPDMERLLARLFA---SSEANGRNSNKVVLYEDAA--KKQLQEFISALHGCE-LM 778
+ L ++PD+ERL+ ++ A ++ ++E K+++++ + AL G E +
Sbjct: 662 ERLCKVPDLERLVQKIHTLGLKYRAEEHPDSRAQMFETMRYNKRKIRDLVRALEGFEHIQ 721
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
D + E+ + G P I + L+HFK+AF+ +A G I+P GV
Sbjct: 722 DLRLKFMENFGESQKPVPALLERCFGYRFPDISNDLEHFKNAFNRDKAQEEGIIVPEKGV 781
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
+YD VKE L +L R+ L ++I + G+ Y LE+PE + ++ ++
Sbjct: 782 IKEYDDTIYNVKECIHELDLYLNVIRRQLHCSNINFFGSGRSRYQLEIPEGIAMNLSHEF 841
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
EL+SS+KG+ R T + L+ L +AE++ + + +++R+ F + KW +V
Sbjct: 842 ELKSSRKGYKRMVTDELVNLVKNLDEAENQLDILRRDLMRRVFADFGDRSIKWTMVVERM 901
Query: 959 AGLTLIL 965
A ++L
Sbjct: 902 AVFDVLL 908
>gi|448087041|ref|XP_004196240.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359377662|emb|CCE86045.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1244
Score = 308 bits (789), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 275/1005 (27%), Positives = 464/1005 (46%), Gaps = 117/1005 (11%)
Query: 2 APGKRQNNGRSPLVNPQRQ---ITSFFSKSN-----SPSPSPTISKLNPNKSNSNPNPNP 53
+ G NN + VN +++ + SFF + + + T SK NK + +
Sbjct: 7 SKGAVLNNTSTLAVNARKKQMSLMSFFKPAKKEEIVNEQKTETFSKEVVNKGKAEDDTRS 66
Query: 54 NSNSNRTPSPSPSP-TTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGE-DVLR--KR 109
+S S +P PSPL S S+ + + P S+P + + D L KR
Sbjct: 67 DSEKENDTSIMDTPGDAPSPLTSEQDVSQGIAVKGTQLPNSSPVRKQEIEDHDALHSIKR 126
Query: 110 IRVYWPLD------KAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSL 163
P D +A +G + + N+ + D DE ESVS
Sbjct: 127 ESASEPADIANTEKRARADGTKQRGLRTKNQPVSYADSDSDE-----------EGESVSG 175
Query: 164 LKRLRRDSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQ 223
++ RR +VE DE+ + + D+ ++S DD + V EDV E + +
Sbjct: 176 ARKRRR------IVESDEDSDEFMPQ--DENAESEDDMSDFVVDDEDVESQSEPEEESDY 227
Query: 224 ENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFD---------- 273
E+ + +K+SG KS ++ ++ S +K ++ L+ F
Sbjct: 228 EDI---KKVKKASGTGKSAISSSSSSSPNISEKPNSIKKTPNNDLAEKFTANSSYSVDLK 284
Query: 274 -----NPVMGDVSER-FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNL 327
PV S++ F+ +++ +L + +DA++R D YD RTLY+P +
Sbjct: 285 PEVSRKPVSTAASKKSFTKENEERYQWL-VNIKDAQKRPIDDPEYDSRTLYIPQSAWSSF 343
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPE 384
+ +KQ+WE KSK D V+FFK GKFYEL+E DA + E DL+ G + + G PE
Sbjct: 344 TAFEKQYWEIKSKMWDTVVFFKKGKFYELYENDAEIANTEFDLKLAGGGRANMKLAGIPE 403
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+F ++ GY+V V+Q ET E+R ++K++KRE+ ++T GTLT+
Sbjct: 404 MSFEYWAKEFIDHGYKVAKVDQKETLLAKEMRGGST-KEEKIIKRELSGILTGGTLTDLN 462
Query: 445 LLSANPDAS-YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
++ N D S Y +++ E ++ + FGI VD ATS + L + DD +C+ L L
Sbjct: 463 MI--NDDMSVYCLSIREE----ILENGCKLFGIAFVDTATSELNLIEFTDDQECTKLDTL 516
Query: 504 LSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
+++++P EII N L + + H+ N + N+L P+SEFWD +TT+ ++
Sbjct: 517 ITQVKPKEIICEKNNLCSIAVKILKFCSHSSNQIWNNLNPVSEFWDYDTTLQKL------ 570
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
+ E L S L+ D A GG LFYL+ LD
Sbjct: 571 ------------IKGGYYEAQDLDDFSHYPSTLVQYKDEKKCAFHAFGGLLFYLRFLKLD 618
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
++L + S +++LD +L NLEV NS G GTL+ +N +T
Sbjct: 619 SSILSLGNIKEYIISK----NTATHLILDGVSLSNLEVLNNSFDGTDRGTLFKLINRAIT 674
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
FGKR+L+TWL PL + I ER D++ F K L+ LPD+ERLLAR+
Sbjct: 675 PFGKRMLKTWLLHPLMDIKKINERFDSIDFFMNGGIEFREMLEKTLNSLPDLERLLARIH 734
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ + ++F+ + E + + SS+ E T + L+ +
Sbjct: 735 GKT------------------LKFKDFLRVVESYESIAKLTSSIKD-YEFTNTGALYSYI 775
Query: 802 TPGKGLPA-IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
T +P + + + H++DAFD EA S I+P GVD ++D++ + + +E L HL
Sbjct: 776 TY---IPKELETCISHWEDAFDRTEA-LSDNIVPMKGVDSEFDNSSEALATLETQLEDHL 831
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ RK I Y GK++YL+EVP ++ ++P D++ S RYW+P ++KL+
Sbjct: 832 RTYRKEFKSNEICYKDSGKEVYLIEVPNKIK-NIPNDWQQMGSTSKVKRYWSPEVRKLVR 890
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
EL + + +++ R+ +F + ++ + + + A + ++
Sbjct: 891 ELLEQRELHKMVCETLKFRMYEKFEKDYSTYMRTLQILAKIDCLI 935
>gi|361129993|gb|EHL01869.1| putative DNA mismatch repair protein msh6 [Glarea lozoyensis 74030]
Length = 963
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 206/679 (30%), Positives = 336/679 (49%), Gaps = 73/679 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D R G YDPRT+Y+PP+ N S +KQ+WE K K D ++FFK GKFYEL+E D
Sbjct: 232 DLDRNPIGHPDYDPRTVYIPPNAFANFSPFEKQYWEIKQKFFDTIVFFKKGKFYELYEND 291
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KG+++ V+Q E+ E+R +
Sbjct: 292 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQMESALGKEMREAD 351
Query: 420 KGSK-------DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQST 470
G K DK+++RE+ V+T GTL EG +L + A++ +A+ ES + PA
Sbjct: 352 DGGKKGKPSKADKIIRRELACVLTGGTLVEGSMLQDDM-ATFCVAIKESVVDDLPA---- 406
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
FGI VD AT + L +DD+D + ++++ RP E++ + +S + R IL++
Sbjct: 407 ---FGIAFVDTATGQFFLSYFVDDVDLTKFETIVAQTRPQELLLEKSCISTKALR-ILKN 462
Query: 531 TRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
P + N P EFW A+ T E+ D + + E G P
Sbjct: 463 NTGPTTIWNHFKPGKEFWAADVTRREL---------------DCSGYFTTDEPGGKEVWP 507
Query: 589 GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV 648
E + ++S+ G YL+ L+ LL F + + + K +V
Sbjct: 508 ----ENLEKARDNDLLMSSFGALTQYLRTLKLERNLLTQGNF-----TWYNPIQKGTTLV 558
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
LD L NLE+F N+ G + GTL+A LN CVT FGKR+ R W+ PL ++ I ER DA
Sbjct: 559 LDGQTLINLEIFANTFDGSTDGTLFALLNRCVTPFGKRMFRQWVCHPLADASKINERLDA 618
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
V + ++ + +F +++R+PD+ERL++R+ A V D +F
Sbjct: 619 V-DMINADRSLSDQFISSMTRMPDLERLISRIHAG-----------VCKPD-------DF 659
Query: 769 ISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANN 828
+ L G E ++ S + + ++ +P + LK +K AFD +A
Sbjct: 660 VRVLDGFEQIEYTMSL--LGAFGGGAGIVDRLIN---AMPDLSEPLKWWKTAFDRSKARE 714
Query: 829 SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS--ITYVTIGKDLYLLEV 886
++P G++ ++D + + E+EA+L L++ RK LG S I + IGK++Y +EV
Sbjct: 715 YKLLVPERGIEEEFDESQDNIAEVEAALQTLLQKARKQLGGNSSKINFKNIGKEVYQIEV 774
Query: 887 PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE 946
P S+ +VP+ + + S+ GF RY+ P +K L+ +L +A+ +K + R +F E
Sbjct: 775 PTSI--TVPKGWSMMSTAAGFKRYYNPELKGLIRQLQEAQETHGQIVKQVAGRFYKRFDE 832
Query: 947 HHNKWRQMVAATAGLTLIL 965
+ W Q V A L ++
Sbjct: 833 SYATWLQAVKVIAQLDCLI 851
>gi|453088772|gb|EMF16812.1| DNA mismatch repair protein msh6 [Mycosphaerella populorum SO2202]
Length = 1202
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 213/709 (30%), Positives = 355/709 (50%), Gaps = 72/709 (10%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+D++ +L + DA R P YDPRT+Y+PP S +KQ+WE K K D ++FF
Sbjct: 269 SDRYPWLA-EIHDADRNPPDHPDYDPRTIYIPPMAWNKFSAFEKQYWEIKQKFWDTIVFF 327
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKFYEL+E DA +G + DL+ + G PE + + KG+++ V+Q
Sbjct: 328 KKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEASLDHWANQFVAKGFKIARVDQM 387
Query: 408 ETPEQLELRRKEKGSKDKVV-----KREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
E+ ++R + +K +RE+ +V+T GTL EG +L+ + A+Y A+ ES
Sbjct: 388 ESKLGKDMRERSDDNKKAKKEEKIIRRELASVLTAGTLVEGSMLTDDL-ATYCAAIKESE 446
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
FGI VD AT++ L + +DD+D + ++++RP E++ +S +
Sbjct: 447 VDGKPN-----FGIAFVDTATAQFQLAEWVDDVDMTRFETFVAQIRPGELLLEKGCISAK 501
Query: 523 TERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
R IL++ +P + N L P EF A+ T ++I T++ AD+
Sbjct: 502 AMR-ILKNNTSPTAIWNYLKPDKEFLTADKTRMKINGEAYFETSDEDESADN-------- 552
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG- 639
P +LSE V SALG +YL +LL+ + +L+ C F
Sbjct: 553 ------WPKVLSE----AKDKDLVFSALGALTWYL-------SLLKIER-DLITCGNFSW 594
Query: 640 --DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
+ K +VLD +L NLE+F N+ G + GTL+ LN C+T FGKR+LR W+ PL
Sbjct: 595 YDPIRKASSLVLDGQSLINLEIFANTFDGSTEGTLFTMLNRCITPFGKRMLRQWVCHPLA 654
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY 757
++ I +R DAV L + F +LS+LPD+ERL++R+ A
Sbjct: 655 DARKINQRLDAVDALNA-DGTVMDRFTSSLSKLPDLERLISRVHA--------------- 698
Query: 758 EDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHF 817
+ + Q+F+ L G E ++ S L E L +++ +P + LKH+
Sbjct: 699 ---GRCKPQDFVKVLQGFEQIEYTMSLLRKFGEG--EGLLGQLIS---AMPDLAGALKHW 750
Query: 818 KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTI 877
+AFD +A + G IP GV+ D+D + +++ ++ L + LK+ RK L +I +
Sbjct: 751 AEAFDRKQATDDGLFIPQPGVEEDFDESQQRIDDVIQRLNQLLKKARKDLDSQAIKFTDN 810
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
GK++Y LE+P ++G++P++++ S+ K R+++P ++ L+ +L +A+ +K++
Sbjct: 811 GKEIYQLEIPIKVKGNIPKNWKQMSATKQCKRWYSPELESLVQDLKEAQEMHAQVVKALA 870
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
R +F E + W A L ++ SL A L S SC E
Sbjct: 871 GRFFARFDEDYATWLAATKIIAQLDCLI---SLARASSSLGSPSCRPEF 916
>gi|170590105|ref|XP_001899813.1| MutS domain III family protein [Brugia malayi]
gi|158592732|gb|EDP31329.1| MutS domain III family protein [Brugia malayi]
Length = 1182
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 221/719 (30%), Positives = 353/719 (49%), Gaps = 71/719 (9%)
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
F FL PDR RDA +R Y PRTL++P F++ + G +QWW KS + D V+FFK+
Sbjct: 194 FDFLQPDRIRDADKRLRSHPDYCPRTLFVPDAFMKKQTPGHRQWWAAKSAYFDTVLFFKV 253
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYE++ MDA +G + L+L YM+G HCGFPE + ++L +GY+V VEQTETP
Sbjct: 254 GKFYEMYHMDAVIGVENLNLNYMRGSFAHCGFPEVAYGRFADQLVNRGYKVARVEQTETP 313
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD----------ASYLMALTE 460
QLE R K + D+VVKRE+C + T GT G +L N D A YL A+ E
Sbjct: 314 TQLENRNKSEKVNDRVVKREVCNITTSGTRXYG-VLDGNDDENIIDVMDTTARYLYAIAE 372
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+G+C +D R +G + D + S L L S +P +I+ +S
Sbjct: 373 RGTENVE------YGVCFIDTTVGRFYIGCLSDGSNRSALRTLFSHYQPAQILYERGRVS 426
Query: 521 PETERAILRHTRNPLVND-LVPLSEFWDAETTVLEIKN------IYNRITAESLNKADSN 573
T I T N + + LV EF +E+T+ + + +Y++ LN D +
Sbjct: 427 ALT-LIIYNTTVNAVPKEALVSKKEFLTSESTLKLLSSDKYFGELYDKWPVVLLNMIDRD 485
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
L C P T D+ +SALG ++YL++ F+D ++ +FEL
Sbjct: 486 SL-------PLKCBP--------TYDA---CVSALGAIIWYLRRCFIDVDMVSMRRFELY 527
Query: 634 -PCSGFGDM-----AKKPY-----MVLDAPALENLEV---------FENSRSGDSSGTLY 673
P + G + + + Y ++LD+ AL++L + F + LY
Sbjct: 528 KPLNLEGVLEDENESDEKYWSGRRLILDSLALKHLNIIPPISSMQKFTLCDPITAKYALY 587
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALSRLPD 732
+N C+T GKRLLR W+ P+ + ++ RQDA+ L + F + + L ++PD
Sbjct: 588 NVINKCITPAGKRLLRQWICAPVCDRKILCSRQDAIEWLSKARLKRFIDKAVELLRKVPD 647
Query: 733 MERLLARLFA---SSEANGRNSNKVVLYEDAA--KKQLQEFISALHGCE-LMDQACSSLG 786
+ERL+ ++ A ++ ++E K+++++ I AL G E + D +
Sbjct: 648 LERLIQKIHTLGLKYRAEEHPDSRAQMFETMRYNKRKIRDLIRALEGFEHVQDLRIEFMK 707
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
++ E+ G P I L+HFK AF+ +A G I+P G+ +YD A
Sbjct: 708 HFGKSQETIPSLLERCFGYRFPDISEDLQHFKSAFNRDKALEDGIIVPEKGIIKEYDDAI 767
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
VKE L +L RK L ++I + G+ Y LE+PE + ++ ++ L+SS+KG
Sbjct: 768 SNVKECIHELDLYLNVIRKQLHCSNINFFGSGRSRYQLEIPEEIAMNLSHEFGLKSSRKG 827
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ R T + L+ L +AE++ + I++R+ F + KW V A ++L
Sbjct: 828 YKRMVTDELVNLVKNLDEAENQLDILRHDIMRRIFADFGDRSTKWTMAVERMATFDVLL 886
>gi|408389823|gb|EKJ69247.1| hypothetical protein FPSE_10585 [Fusarium pseudograminearum CS3096]
Length = 1210
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 220/708 (31%), Positives = 351/708 (49%), Gaps = 78/708 (11%)
Query: 290 DKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+K H PD+R D +RR+P D YD RT+Y+PP S + Q+W+ K
Sbjct: 282 EKAHTRDPDQRYPWLANIMDKERRKPDDPDYDKRTIYVPPAAWNKFSPFETQYWKIKQNL 341
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA VG +E D + + G PE + V + K Y+
Sbjct: 342 WDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPESSLDYWVNQFIAKQYK 401
Query: 401 VLVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
V V+Q ET E+R ++ SK DK++ RE+ ++T GTL +G +L + ASY +A+
Sbjct: 402 VARVDQMETNLGKEMRERQDKSKKADKIITRELACILTAGTLVDGGMLQDDM-ASYCVAI 460
Query: 459 TES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
ES + PA FGI D AT R L +DD+D + L+++ P E++
Sbjct: 461 KESVVDDLPA-------FGIAFADTATGRFYLSSFVDDVDLTKFETLIAQTGPRELLIEK 513
Query: 517 NMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
+ LS + R IL++ +P + L P +EFWDA+TT E LN A+
Sbjct: 514 SHLSTKALR-ILKNNTSPTTIWTHLKPGTEFWDADTTRRE------------LNTANYFK 560
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+ E L G+ + + ++SA G + YL+ ++ LL FEL
Sbjct: 561 TDDADEEVWPEALQGLRDDDV--------IMSATGALISYLRFLKVEGPLLSQGNFEL-- 610
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ + K ++LD L NLEVF NS +G S GTL++ LN CVT FGKRL R+W+A
Sbjct: 611 ---YNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTPFGKRLFRSWVAH 667
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL N I ER DAV L +Q +F L ++PD+ERL++R+ A
Sbjct: 668 PLCNIDRINERLDAVEMLNA-DQTVREQFASQLVKMPDLERLISRIHAG----------- 715
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
A K ++F+ L G E ++ LG+ + + +++ +P + L
Sbjct: 716 -----ACKP--EDFVKVLEGFEQIEYTMGLLGSY--KGGNGLVDRLIS---SMPDLDEPL 763
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY 874
+++ AFD +A + +IP G++ D+D + ++ EI+ L L E++K + +
Sbjct: 764 SYWRTAFDRNKARDEKILIPERGIEDDFDQSSDRIDEIKQQLEDLLAEKKKEFKCKLLKF 823
Query: 875 VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
+GK++Y LE P+S++ VP + S+ K RY+ P++ +L+ EL +AE ++
Sbjct: 824 THVGKEIYQLEAPKSVK--VPSSFRQMSATKDVKRYYFPDLSQLVRELQEAEETHSQLVR 881
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ R +F ++ W + + L ++ SL A L SC
Sbjct: 882 EVASRFFQKFDVDYDTWLSAIKIISQLDCLV---SLAKASASLGQPSC 926
>gi|146418998|ref|XP_001485464.1| hypothetical protein PGUG_03193 [Meyerozyma guilliermondii ATCC
6260]
Length = 1198
Score = 306 bits (785), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 343/692 (49%), Gaps = 72/692 (10%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + RDA++R D YDPRTLY+P + +KQ+WE K D
Sbjct: 263 FAKENEERYQWL-VNVRDAEKRTMDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKGVMWD 321
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + E DL+ G + + G PE +F ++ GY+
Sbjct: 322 TVVFFKKGKFYELYENDATIANSEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 381
Query: 401 VLVVEQTETPEQLELRRKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V V+Q E+ E+R G+K +K++KRE+ V+T GTLT+ +LS + ++Y +++
Sbjct: 382 VAKVDQKESLLAKEMRG--GGTKEEKIIKRELTGVLTGGTLTDLNMLSDDM-STYCLSI- 437
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
+ D FG+ VD ATS + Q DD +C+ L L++ +RP E+I + L
Sbjct: 438 --------KQFDNWFGVVFVDTATSELNFYQFEDDNECTKLETLVTHVRPKEVICEKHNL 489
Query: 520 SPETERAILRHTRNP---LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
S T IL++T P + N L P +EFWD +TT L K S+
Sbjct: 490 S-STATKILKYTAQPSNQIWNTLNPNTEFWDYDTT---------------LEKLVSSKYY 533
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P LI+ D SA GG L YLK LD ++ +
Sbjct: 534 DATDLDDFSNYP---DALIAFKDKNQYAFSAFGGLLSYLKFLKLDHNIMTMGNIREYQIT 590
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+AK M+LD L NLE+ NS G GTL+ LN + FGKR+L+ W+ PL
Sbjct: 591 --TRLAKN--MILDGITLNNLEILTNSFDGSDKGTLFKLLNRAQSPFGKRMLKNWVLNPL 646
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
S I +R D+V L G K+L LPD+ERL+AR + +
Sbjct: 647 MVSSDINDRLDSVEYLMGEGAEIKDILEKSLLGLPDLERLIARTHSKN------------ 694
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR--QLHHILTPGKGLPA-IVSI 813
+ ++F+ + G E + C +L + + + L+ L +G P + S
Sbjct: 695 ------IKFKDFLKLIEGFE---KVCGTLQNLKDFVKESCGSLYKYL---QGFPTELKSC 742
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
+ ++DAFD EA N ++P GVD +D++ ++K++E L +HL++ +K I
Sbjct: 743 VNEWEDAFDRSEALND-VVVPATGVDESFDASSDRMKKLEDILNEHLRKYKKEYRSNEIC 801
Query: 874 YVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
Y GK++YL+EVP ++ ++P D+ S R+W+P +KKL EL + +
Sbjct: 802 YKDSGKEIYLIEVPNKVK-NIPSDWHQMGSTSKVKRFWSPEVKKLARELMEQRETHKMVC 860
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+++ R+ +FC+H+ W+ + A + I+
Sbjct: 861 ETLRFRMYERFCKHYKVWKSTIHVLANIDCII 892
>gi|322706069|gb|EFY97651.1| DNA mismatch repair protein msh6 [Metarhizium anisopliae ARSEF 23]
Length = 1222
Score = 306 bits (784), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 293/1019 (28%), Positives = 452/1019 (44%), Gaps = 167/1019 (16%)
Query: 18 QRQITSFFSKSN-------------SPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPS 64
QR I SFF KS+ SP P + K+NS P P P S + +P
Sbjct: 33 QRSIMSFFQKSSPVGRSSPAARDKVSPDPQHSSCLQETTKANSLPKPKP---STKLSTPV 89
Query: 65 PSPTTPSPLQSNPKKSRLVIGQTPSPP---PSTPAAAKSYGEDVLRKRIRVYWPLDKAWY 121
PS P S + +T S P+T DV K ++ P K
Sbjct: 90 PSSDAIEPPSSQENADPVSATKTTSSALLSPTTMNPRTRSTNDVTPKAVQSGTPTRK--- 146
Query: 122 EGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRD-----SFKKVV 176
K +V Y + DE ++ + +S + R RR F +
Sbjct: 147 -----------TKKVVSYAESSDE-----EQPFNYSSKSQTRRGRARRTVKDEDEFDEDD 190
Query: 177 VEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSS 236
V EE +++ D I+ D SD D + ++ + K RKR +
Sbjct: 191 VASQEEEDDMGDFIASDDSD----DLPRTKKRK-------------RPAKAATARKRSNV 233
Query: 237 GVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFD------NPVMGDVSERFSARE-- 288
G+ ++ D ++ V + N +D PV+ +ER +A++
Sbjct: 234 SPPADIRQGSPIH-DVDDELMTEVPTTSTTSQWN-YDPESTEKRPVVTP-AERAAAKDPK 290
Query: 289 -ADKFHFLGP-DR-------RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
+K H P DR RD ++R P D YDPR++Y+PP S +KQ+WE K
Sbjct: 291 RKEKAHTKEPEDRYPWLANIRDKEKRAPSDPEYDPRSIYIPPMAWNKFSPFEKQYWEIKQ 350
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
D ++FFK GKFYEL+E DA +G +E D + + G PE + V + K
Sbjct: 351 NLWDTIVFFKKGKFYELYENDATIGHQEFDFKMTDRVNMRMVGVPESSLDHWVNQFIAKQ 410
Query: 399 YRVLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYL 455
Y+V V+Q ET E+R R+++ K DKV+ RE+ V+T GTL +G +L + A+Y
Sbjct: 411 YKVARVDQMETNLGKEMRERQDRSGKKADKVISRELSCVLTAGTLVDGGMLQDDM-AAYC 469
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ ES + PA FGI D AT R L DD+D + ++++ P E++
Sbjct: 470 VAIKESVVDDLPA-------FGIAFADTATGRFQLSGFTDDVDLTKFETFVAQIGPRELL 522
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+ LS R IL++ +P + L P +EFWDA+T+ E+K T ES
Sbjct: 523 IEKSHLSTRALR-ILKNNTSPTTIWTHLKPGTEFWDADTSRRELKCGNYFTTQES----- 576
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
E D + E++ V+SA+GG + YLK L+ LL FE
Sbjct: 577 --------EDD-------VWPEVLQQYKDDDLVMSAVGGLVSYLKFLLLERPLLSQGNFE 621
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + K +VLD L NLE+F N+ +G S GTL++ LN C+T FGKRL R W
Sbjct: 622 -----KYSPIQKNGTLVLDGQTLVNLELFSNTSNGSSEGTLFSLLNKCITPFGKRLFRQW 676
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS 751
+A PL + I ER DAV L + +F L ++PD+ERL++R+ A
Sbjct: 677 VAHPLCDIQRINERLDAVDMLNA-DPTVREQFASQLVKMPDLERLISRVHAG-------- 727
Query: 752 NKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL---- 807
A K ++F+ L G E ++ S L A G GL
Sbjct: 728 --------ACKP--EDFVRVLEGFEQIEYTMSLLQA-------------FKGGNGLVDRL 764
Query: 808 ----PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P + L ++K AFD +A +IP G++ D+D + +++EI+ L L E+
Sbjct: 765 VLSMPDLEEPLTYWKTAFDRRKAREDKILIPSRGIEPDFDDSLNRMEEIKDQLNDLLSEK 824
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+ L +I + +GK++Y +E P+S++ VP + S+ K R++ P + +L+ EL
Sbjct: 825 KGELKCRTIKFTDVGKEIYQMETPKSVK--VPSSWRQMSATKDVKRWYFPQLTQLVRELQ 882
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+AE ++ I RL +F +N W + A L ++ SL A L SC
Sbjct: 883 EAEELHSQLVREIASRLFQKFDVDYNTWLLAIKIVAQLDCLV---SLAKASNSLAQPSC 938
>gi|302502899|ref|XP_003013410.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
gi|291176974|gb|EFE32770.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
Length = 1217
Score = 306 bits (783), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 216/722 (29%), Positives = 356/722 (49%), Gaps = 82/722 (11%)
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
E S+ + K H P+ R D + G YDPRTLY+PP S +KQ
Sbjct: 264 ETHSSSKQKKAHMTEPENRYPWLANIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEKQ 323
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 324 YWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 383
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 384 QFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQKEDKVIKRELACVLTTGTLVEGS 443
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ E+ + PA FGI VD AT + L Q +DD+D +
Sbjct: 444 MIQGDM-STYCVAIKEAIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 495
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV E+ + +
Sbjct: 496 FVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVREL-DAGD 553
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+E N A + P L + V+SA G L YL+ +
Sbjct: 554 YFVSEDKNHA--------------SAWPQALQD----ARDKDLVMSAFGALLQYLEMLKI 595
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 596 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCV 650
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 651 TPFGKRLFKQWVCHPLMDIKKINARLDAVESLNA-DSTVREQFSSQLTKMPDLERLISRV 709
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 710 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGHGLIGQ 748
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +LK ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 749 LI--SAMPDLNGLLKFWETAFDRAKARESDILVPEEGIEEEFDASKKNIEQLEDELEQVL 806
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 807 QRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 865
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSN 980
+L +A +K + R +F + ++ W V A L ++ L A L
Sbjct: 866 KLQEARETHAQVVKGVAGRFYARFDKDYSSWLAAVKIIAQLDCLI---GLAKASTALGHP 922
Query: 981 SC 982
SC
Sbjct: 923 SC 924
>gi|300123248|emb|CBK24521.2| unnamed protein product [Blastocystis hominis]
Length = 1265
Score = 305 bits (782), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 212/721 (29%), Positives = 346/721 (47%), Gaps = 76/721 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + P D YDP +L++P D+LR + G KQWW K + D V+ K+GKFYE + M
Sbjct: 268 RDKYKHSPSDPKYDPTSLFVPSDYLRGCTNGMKQWWAVKQQAFDCVLLMKVGKFYETYHM 327
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
DA + K DL YMKGE H GFPE +S +L YRV VEQTETP+Q++ R
Sbjct: 328 DADIVVKVCDLVYMKGETAHAGFPEAAYSKFSNQLVNANYRVARVEQTETPQQMK-ERNA 386
Query: 420 KGSKDKVVKREICAVVTKGTLTEGEL--LSANPDASYLMALTE--SNQSPASQSTDR--- 472
K +V+RE+C+++T G G + + D L ++ E ++SP + +
Sbjct: 387 VSEKKALVRREVCSIITPGVAGHGTVDKIYNQKDHRILCSIVEERKDESPEEEDLGKDEE 446
Query: 473 --------------CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
G+C+VD LGQ +DD + L L P E I N
Sbjct: 447 KGKKMVQGGKNAAVVIGLCIVDTVFGDFYLGQFIDDDQRTALRTQLLRFLPTEFILHKNA 506
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
L T + + R + +++ + P S F E +++ + +L D +S
Sbjct: 507 LHSRTIQLLRRECPSAMLSFVDPQSSF--------EPQHLLRLVKQNNLFDTDD---DSM 555
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-------- 630
+G+ L I+ + + SQVLSAL + YL + + L+ KF
Sbjct: 556 PKGEWPDLLEMIVKDREHPEPAFSQVLSALYLSSAYLHRCCVARLLMSQHKFYLIDNIDR 615
Query: 631 ---ELLP--CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+L+P + ++ + M+LDA L NL++ + S S+ +L+ ++H VT FGK
Sbjct: 616 ERDQLVPFISNQLEEVPTQSNMILDAITLRNLDILPDP-SNPSTNSLFQYIDHTVTPFGK 674
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFA 742
RLL+ WL +PLY I +R DAV L ++Q F+ + D++RLL+RL
Sbjct: 675 RLLKEWLCKPLYQIDAINKRLDAVEELISKTHISQLITTSFKGIV----DVDRLLSRLHD 730
Query: 743 SSEA---NGRNSNKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
++ N+ YED +++++F+ + E+M Q + ++ E+ S L
Sbjct: 731 YCQSVILKAHPDNRAQYYEDKKYNTRKIKDFVQLI---EVMKQILKTFKSVSESFSSEIL 787
Query: 798 HHILTPGKG-----------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ T P + S+L F +F+ A G I+P G+D + D
Sbjct: 788 RSLFTISSLDSSSSATNKLEFPDMTSVLDFFDHSFNHEVAIEQGIIMPKPGMDPELDKIS 847
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL---RGSVPRDYELRSS 903
++ + +L +L+E R I Y KD + L+ PES+ G++P+++ L+S
Sbjct: 848 MDLQSTQRNLENYLEEIRNRFHCQKIEYFGSNKDRFQLQFPESVCQSLGAMPKEFLLKSR 907
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
KKGF R+WTP I++ L E +K++ALK+ + +F +H++ W+QMV A L +
Sbjct: 908 KKGFKRFWTPYIQEQFARLQVLEDKKQTALKNCTATVFTKFYQHYDHWKQMVNCVATLDV 967
Query: 964 I 964
+
Sbjct: 968 L 968
>gi|342876461|gb|EGU78072.1| hypothetical protein FOXB_11416 [Fusarium oxysporum Fo5176]
Length = 1228
Score = 305 bits (781), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 227/724 (31%), Positives = 355/724 (49%), Gaps = 81/724 (11%)
Query: 281 SERFSARE---ADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSE 329
+ER + R+ +K H PD+R D +R+P YD RT+Y+PP + S
Sbjct: 288 AERVALRDPKYKEKAHTKDPDQRYPWLANIMDKDKRKPDHPEYDKRTIYIPPAAWQKFSP 347
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFS 388
+ Q+W+ K D ++FFK GKFYEL+E DA VG +E D + + G PE +
Sbjct: 348 FETQYWKIKQNLWDTIVFFKKGKFYELYENDATVGHQEFDFKMTDRVNMRMVGVPESSLD 407
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELL 446
V + K Y+V V+Q ET E+R ++ SK DKV+ RE+ ++T GTL +G +L
Sbjct: 408 HWVNQFIAKQYKVARVDQMETNLGKEMRERQDKSKKADKVITRELACILTAGTLVDGSML 467
Query: 447 SANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+ ASY +A+ ES + PA FGI D AT R L +DD+D + L+
Sbjct: 468 QDDM-ASYCVAIKESVVDDLPA-------FGIAFADTATGRFYLSTFVDDVDLTKFETLI 519
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRI 562
++ P E++ + LS + R IL++ +P + L P EFW+A+ T E+ +
Sbjct: 520 AQTGPRELLLEKSRLSTKALR-ILKNNTSPTTIWTHLKPGDEFWEADKTRREL-DCGGYF 577
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
AE AD V P IL L +SA G + YL+ L+
Sbjct: 578 KAED---ADEEV------------WPEILQSL----RDDDLAMSATGALISYLRFLKLER 618
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LL FEL + + K ++LD L NLEVF NS +G S GTL++ LN CVT
Sbjct: 619 PLLSQGNFEL-----YNPIQKNGTLILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTP 673
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
FGKRL R+W+A PL N I ER DAV L +Q +F L ++PD+ERL++R+ A
Sbjct: 674 FGKRLFRSWVAHPLCNIDRINERLDAVEMLNA-DQTVREQFASQLVKMPDLERLISRIHA 732
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
A K ++F+ L G E ++ S LGA + + +++
Sbjct: 733 G----------------ACKP--EDFVKVLEGFEQIEYTMSLLGAY--KGGNGLVDRLIS 772
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+P + L +++ AFD +A + +IP G++ D+D + +++EI+ L L E
Sbjct: 773 ---SMPNLDEPLSYWRSAFDRSKARDEKLLIPERGIEEDFDQSSDRIEEIKQQLEDLLAE 829
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
++K + + +GK++Y LE P+S++ VP + S+ K R++ P + +L+ EL
Sbjct: 830 KKKEFKCKLLKFTDVGKEIYQLEAPKSVK--VPSTFRQMSATKDVKRWYFPELSQLVREL 887
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+AE ++ + R +F + W Q + + L ++ SL A L SC
Sbjct: 888 QEAEETHSQLVREVASRFFQKFDVDYETWLQAIKIISQLDCLV---SLAKASASLGQPSC 944
Query: 983 SSEM 986
E
Sbjct: 945 RPEF 948
>gi|320581644|gb|EFW95863.1| hypothetical protein HPODL_2146 [Ogataea parapolymorpha DL-1]
Length = 1638
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 245/790 (31%), Positives = 387/790 (48%), Gaps = 81/790 (10%)
Query: 197 SSDDDW----NKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGNAVNADF 252
S+DDD+ +N+ E +D V+ VDE++N ++ + K G KS G ++ A F
Sbjct: 171 SADDDYFVPDTENLADELNGDDFPVE-VDEEDNSLVSSKPAK--GSPKSTDAGISMLA-F 226
Query: 253 KSPIIKPVKIFGSDKLSNGFDNPVMGDVSE-RFSAREADKFHFLGPDRRDAKRRRPGDVY 311
K P K+S V + +F+ +++ +L +DA R D
Sbjct: 227 KFESNSPYTAADKSKVST--KRQVRKQTPQSKFAKENEERYQWL-VHIKDADGRSESDPD 283
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRTLY+P + +KQ+WE KSK D ++FFK GKF+EL+E DA +G ++ DL+
Sbjct: 284 YDPRTLYIPKSAWSKFTAFEKQYWEIKSKMWDSIVFFKKGKFFELYEKDADIGHQKFDLK 343
Query: 372 YM---KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKD-KVV 427
+ G PE +F +K +GY+V V+Q E+ E+R K +KD KV+
Sbjct: 344 LAGTGRANMRLAGIPEMSFDYWAKKFIDEGYKVAKVDQKESLLAKEIREKNANTKDDKVI 403
Query: 428 KREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
KRE+ V+T GTLT+ +LS + + Y ++L E + S++ FG+C VD AT +I
Sbjct: 404 KRELSCVLTCGTLTDEGMLS-DEMSRYCLSLKEVTNNDNSKT----FGVCFVDTATGKIQ 458
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEF 545
L Q DD+DC+ L LL++++P+E++ + +S R +L+ P N L P EF
Sbjct: 459 LTQFEDDVDCNKLETLLAQIQPMEVLIEKSRVSQLVLR-MLKFNSQPHATFNFLKPADEF 517
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
W +E I E L + AN + D L+ P IL E + +
Sbjct: 518 WTSE------------IAFEQLTRGKYFEAN---DLDDLSNYPNILVEYYESNKNVG--F 560
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLP--CSGFGDMAKKPYMVLDAPALENLEVFENS 663
SA G L+YLK LD L+ E + F D M LD L+NLE+F NS
Sbjct: 561 SAFGALLWYLKSLKLDTALISMGNIEQYDPYKTSFSDTC----MRLDGVTLQNLEIFSNS 616
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG-VNQPFALE 722
GTL+ LN V+ FGKR ++W+ PL + I R D+V L + + LE
Sbjct: 617 FDQSDKGTLFKILNRAVSPFGKRTFKSWVTHPLMSRKTIESRLDSVEILMNDGDLKYLLE 676
Query: 723 FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQAC 782
+ L +LPD+ERLLAR+ + ++++F + G E +
Sbjct: 677 SK--LGKLPDLERLLARIHS------------------GNLKVKDFARCVTGFECI---- 712
Query: 783 SSLGAILENT--ESRQ-----LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPH 835
SL IL++T E Q L IL P + + ++ +AFD A G ++P
Sbjct: 713 VSLVKILKSTYPEGTQRLGGELGRILDSFP--PELPECVSNWSNAFDRELAVKDGILVPE 770
Query: 836 GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVP 895
GV+ ++D + +K+KE+E L + L + R+ + Y GK++YL+EVP +P
Sbjct: 771 LGVEPEFDESNQKIKELEKELERILSQYRREFKCQEMCYKDSGKEIYLIEVPSKAISRIP 830
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+D++ ++ RYW+ +KKL+ +L +A + +S+ R+ G+F + W +
Sbjct: 831 KDWQQMAATSKCKRYWSTEVKKLVRKLMEARELHKIIGESLQARMYGRFMGDYPIWSSSI 890
Query: 956 AATAGLTLIL 965
A A L IL
Sbjct: 891 KAVAQLDCIL 900
>gi|308198192|ref|XP_001387139.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
gi|149389076|gb|EAZ63116.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
Length = 1212
Score = 302 bits (774), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 206/697 (29%), Positives = 336/697 (48%), Gaps = 57/697 (8%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
PV + FS +++ +L D RDA++R D YDPRTL++P + +KQ
Sbjct: 263 TPVKTTPKKNFSKENEERYQWL-VDVRDAEKRTTDDPNYDPRTLHVPQSAWSKFTAFEKQ 321
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMN 390
+WE KSK + V+FFK GKFYEL+E DA + E DL+ G + + G PE +F
Sbjct: 322 YWEIKSKMYNTVVFFKKGKFYELYENDATIANTEFDLKIAGGGRANMKLAGIPEMSFEYW 381
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGTLTEGELLSAN 449
++ GY+V V+Q E+ E+R G+K+ K++KRE+ V+T GTLT+ +++S +
Sbjct: 382 AKEFISHGYKVAKVDQVESLLAKEMRGG--GTKEEKIIKRELTGVLTGGTLTDMDMISDD 439
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
A Y +++ E S + FG+ VD ATS + + DD +C+ L L+++++P
Sbjct: 440 M-AVYCLSVKEEILDDGS----KIFGVVFVDTATSEVNFIEFPDDAECTKLETLITQIKP 494
Query: 510 VEII-KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
EI+ N+ S + + + N L P+SEFWD +TT N ++A+ +
Sbjct: 495 KEILCMKGNLCSIAVKILKFNAQGHQIWNQLNPISEFWDYDTTC------ENLVSAKYYD 548
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
D D + P LI D+ A GG LFYL+ LD +++
Sbjct: 549 AEDL---------DDYSNYP---PTLIDYKDNHKVAFGAFGGLLFYLRSLKLDSSIMTLG 596
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
S +M+LD L NLE+ NS G GTL+ +N T FGKR +
Sbjct: 597 HISEYQISK----NSSTHMLLDGITLNNLEILSNSFDGGDKGTLFKLINKASTPFGKRAM 652
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
++ + PL I ER DA+ L + + L+ LPD+ERLLAR+ + +
Sbjct: 653 KSLVLHPLMKINEINERYDAIEYLMNEGLELRSKLEQTLTSLPDLERLLARIHSKT---- 708
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
+ ++F+ + E + ++ L + H+ + + LP
Sbjct: 709 --------------LKFKDFLKVVESFEGISKSLGPLHEFIPEESGALFKHLKSFPRELP 754
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
+VS + DAFD EA ++P GVD ++D + K+K +E L ++LKE ++
Sbjct: 755 ELVS---QWDDAFDREEAKKD-VVVPTEGVDAEFDDSQCKMKILEDKLEQYLKEYKRTYK 810
Query: 869 DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+ Y GK++YL+E+P L VP D++ S RYW+P +K+ EL +
Sbjct: 811 SHEVVYRDSGKEIYLIELPNKLVKQVPNDWQQMGSTSKVKRYWSPEVKRTARELMEQREL 870
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ +S+ R+ +F H+ W + V + + IL
Sbjct: 871 HKMVCESLKSRMYERFDAHYKTWLKAVHSLGKIDCIL 907
>gi|340966746|gb|EGS22253.1| DNA mismatch repair protein msh6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1238
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 207/672 (30%), Positives = 333/672 (49%), Gaps = 68/672 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
DA + PG YDP TLY+PP RN S +KQ+WE K D V+FFK GKFYEL+E D
Sbjct: 328 DANKNPPGHPDYDPSTLYIPPSAERNFSPFEKQYWEIKKNLWDTVVFFKKGKFYELYEND 387
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + M + + KGY+V V+Q E+ E+R ++
Sbjct: 388 ATIGHQLFDLKLTDRVNMRMVGVPEGSLDMWINQFVAKGYKVARVDQMESLLGKEMRERD 447
Query: 420 KGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFG 475
K DKV++RE+ ++T GTL EG +L + A+Y A+ E + P+ FG
Sbjct: 448 SNVKKVDKVIRRELTCILTAGTLVEGSMLQDDM-ATYCAAIKEVMIDDKPS-------FG 499
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP- 534
+ VD AT + L + DD++ + ++++ P E++ + LS + R IL+ +P
Sbjct: 500 VAFVDAATGQFWLSEFEDDVELTRFETFVAQISPRELLLEKSRLSTKALR-ILKGNTSPT 558
Query: 535 -LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
+ N L P +EFWDA+ T E++ + AE DG P L E
Sbjct: 559 TIWNYLKPGTEFWDADMTRRELE-CSDYFKAE----------------DGKDKWPDKLCE 601
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+ +SALGG YL+ LD +LL FE + + + ++LD
Sbjct: 602 M----KDKDLAMSALGGLTHYLRFLKLDSSLLSQGNFE-----RYNPIHRNGTLILDGQT 652
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ PL N I ER DAV L
Sbjct: 653 LINLEIFANTANGGPEGTLHNLLNRCITPFGKRLFRQWVCHPLCNIQKINERLDAVEMLN 712
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
+Q +F ++++PD+ERL++R+ A + + +F+ L
Sbjct: 713 A-DQSILRQFTSQMAKMPDLERLISRIHAGA------------------CRPDDFVRVLE 753
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
G E +D S LGA + + ++ +P + L ++++AFD +A I
Sbjct: 754 GFEQIDYTMSLLGAFAGG--NGLVDRLIA---AMPNLKEPLAYWENAFDKKKAKEEKVFI 808
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
P GVD D+D +++ I+ L L++Q+ L ++ + +GK++Y +EVP+S++
Sbjct: 809 PERGVDEDFDRTADEIERIKDELNSLLEKQKAALKCKTLKFTDVGKEIYQIEVPKSVK-- 866
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S+ RY+ ++ L+ EL +AE K + +F +++ W Q
Sbjct: 867 VPSSWRQMSATSSVKRYYFRELENLIRELQEAEEIHSQVTKDVASNFFKKFDANYDIWLQ 926
Query: 954 MVAATAGLTLIL 965
+ A L ++
Sbjct: 927 AIRIIAQLDCLI 938
>gi|171679972|ref|XP_001904932.1| hypothetical protein [Podospora anserina S mat+]
gi|170939612|emb|CAP64839.1| unnamed protein product [Podospora anserina S mat+]
Length = 1230
Score = 302 bits (773), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 211/711 (29%), Positives = 352/711 (49%), Gaps = 78/711 (10%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P++R D ++ P D +DP ++Y+PP + S +KQ+W+ K
Sbjct: 284 KAHTQEPEKRYPWLANILDGNKKPPTDPEFDPTSIYIPPAAEKQFSAFEKQYWDIKKNLW 343
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + M V + KG++V
Sbjct: 344 DTVVFFKKGKFYELYENDATIGHQLFDLKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKV 403
Query: 402 LVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V+Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + A+Y A+
Sbjct: 404 ARVDQMESALGKEMRERDAKAKKADKIIRRELACILTAGTLVDGSMLQDDM-ATYCAAIK 462
Query: 460 ES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
ES + P CFGI VD AT + ++ + DD+D + +++ P E++ +
Sbjct: 463 ESVVDGKP-------CFGIAFVDAATGQFLISEFEDDVDLTKFETFVAQTCPRELVLEKS 515
Query: 518 MLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA 575
LS + R IL++ P + N L P +EFWDAET+ E++ N SN
Sbjct: 516 RLSTKALR-ILKNNTAPTTIWNYLKPGTEFWDAETSRRELE----------CNGYFSNAD 564
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
N + + E + ++SALGG + YL+ L+ +LL FE
Sbjct: 565 NQEE----------VWPEKLEKVKEKDLLMSALGGLVHYLRFLKLERSLLSQGNFE---- 610
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ + + ++LD L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ P
Sbjct: 611 -PYNPIHRNGTLILDGQTLINLEIFSNTANGGVEGTLFNLLNRCITPFGKRLFRQWVCHP 669
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
L N I ER DAV L A EF +S++PD+ERL++R+ A S
Sbjct: 670 LCNIQKINERLDAVDMLSNDKSALA-EFSSHMSKMPDLERLISRIHAGS----------- 717
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILK 815
+ ++F+ L G E +D + LGA + + +++ +P + L
Sbjct: 718 -------CRPEDFVRVLEGFEQIDYTMNFLGAF--GGGNGLVDRLIS---CMPDLKEPLG 765
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+++ AFD +A +S +IP G++ DYD++ ++ I+ L + L++Q+ L + +
Sbjct: 766 YWETAFDRKKARDSKVLIPERGIEEDYDNSEDELNRIKEELAQLLEKQKTALKCRQLKFT 825
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
+GK++Y +EVP+S + VP + S+ RY+ ++ L+ EL + E +K
Sbjct: 826 DVGKEVYQIEVPKSTK--VPSSWRQMSATAAVKRYYFRELESLVRELQETEETHSQIVKE 883
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ R +F + W Q + + L ++ SL + L L SC E
Sbjct: 884 VASRFFKKFDVDYEVWLQAIRIISQLDCLM---SLAKSSLALGLPSCRPEF 931
>gi|302657967|ref|XP_003020694.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
gi|291184551|gb|EFE40076.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
Length = 1217
Score = 301 bits (772), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 215/722 (29%), Positives = 354/722 (49%), Gaps = 82/722 (11%)
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
E S+ + K H P+ R D + G YDPRTLY+PP S +KQ
Sbjct: 264 ETHSSSKQKKAHMTEPENRYPWLANIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEKQ 323
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D ++FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 324 YWEIKQKFWDTIVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 383
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 384 QFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQKEDKVIKRELACVLTTGTLVEGS 443
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ E+ + PA FGI VD AT + L Q +DD+D +
Sbjct: 444 MIQGDM-STYCVAIKEAIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 495
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ + +S + R IL++ P L N L P EFW+A+ TV E+ + +
Sbjct: 496 FVAQTRPQELLLEKSAMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVREL-DAGS 553
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+E N A + P L + V+SA G L YL+
Sbjct: 554 YFVSEDKNHA--------------SAWPQALQD----ARDKDLVMSAFGALLQYLEMLKT 595
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 596 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFQLLNRCV 650
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 651 TPFGKRLFKQWVCHPLMDIKKINARLDAVESL-NADSTVREQFSSQLTKMPDLERLISRV 709
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 710 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGHGLIGQ 748
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +LK ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 749 LI--SAMPDLNGLLKFWETAFDRSKARESDILVPEEGIEEEFDASKKNIEQLEDELEQVL 806
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ R+ L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 807 QRTRRELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 865
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSN 980
+L +A +K + R +F + ++ W V A L ++ L A L
Sbjct: 866 KLQEARETHAQVVKGVAGRFYARFDKDYSSWLAAVKIIAQLDCLI---GLAKASTALGHP 922
Query: 981 SC 982
SC
Sbjct: 923 SC 924
>gi|400602832|gb|EJP70430.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1206
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 214/692 (30%), Positives = 344/692 (49%), Gaps = 73/692 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD +RR PGD YDPRT+Y+PP S +KQ+WE K D ++FFK GKFYEL+E
Sbjct: 295 RDKERREPGDPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYEN 354
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-R 417
DA +G +E D + + G PE V + K Y+V V+Q ET E+R R
Sbjct: 355 DATIGHQEFDFKMTDRVNMRMVGVPESVLDHWVNQFIAKQYKVARVDQMETNLGKEMRER 414
Query: 418 KEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRC 473
++K K DKV+ R++ V+T GTL +G +L + A++ +A+ ES + PA
Sbjct: 415 QDKTGKKADKVISRQLACVLTAGTLVDGSMLQDDM-AAHCVAIKESVVDGLPA------- 466
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
FGI VD AT L +DD+D + ++++ P E++ + LS + R IL++ +
Sbjct: 467 FGIAFVDTATGHFFLTDFIDDVDLTKFETFIAQIGPREMLLEKSHLSTKANR-ILKNNTS 525
Query: 534 P--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
P + L P EFWDA+T E LN A+ +EG
Sbjct: 526 PTTIWTYLKPDVEFWDADTCRRE------------LNAANYFSTEKGSEGS--------W 565
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
E + +V+SA+G ++YL+ L+ LL + F L + + K ++LD
Sbjct: 566 PEALEKEKDNDRVMSAVGALIWYLRFLKLERPLLSQSNFSL-----YNPIQKNGTLILDG 620
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L NLE+F NS +G S GTL+ LN C+T FGKRL R W+A PL N I ER DAV
Sbjct: 621 QTLINLEIFSNSVNGGSEGTLFQLLNKCITPFGKRLFRQWVAHPLQNIDRINERLDAVDM 680
Query: 712 LRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L P E F L ++PD+ERL++R+ A S + ++F+
Sbjct: 681 LN--KDPSVREQFSSQLVKMPDLERLISRIHACS------------------CKPEDFVR 720
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L G E ++ + + A + L +++ +P + L ++++AFD +A
Sbjct: 721 VLEGFEQIEYTMTLVSAF--KGSNGLLDRLIS---AMPDLEEPLAYWRNAFDRPKAKQDK 775
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
+IP G++ D+D++ ++++ I++ L + L +++ L S+ + +GK++Y +E P++
Sbjct: 776 ILIPERGIEEDFDASLERIETIKSQLQELLADKKVELKCKSLKFTDVGKEIYQIEAPKAT 835
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
+ VP + SS K R++ + L+ EL +AE ++ + R +F +
Sbjct: 836 K--VPSSWRQMSSTKDVKRWYFSELTALVRELQEAEETHSQLVRDVAARFCKKFDVDYEL 893
Query: 951 WRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
W + A L ++ SL A L L SC
Sbjct: 894 WLSAIQVIAQLDCLV---SLAKASLCLGEPSC 922
>gi|429849425|gb|ELA24817.1| DNA mismatch repair protein msh6 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1294
Score = 301 bits (771), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 281/1027 (27%), Positives = 459/1027 (44%), Gaps = 153/1027 (14%)
Query: 5 KRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKS-------NSNPNPNPNSNS 57
KRQ + S Q+ I FFSKS S P+P + P+ S +N P
Sbjct: 96 KRQPSSSS---GTQKTIVQFFSKSAS-KPTPKPAAKGPDSSPCLRESTRTNELPKVKQPP 151
Query: 58 NRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVYWPLD 117
+ TP PS PS Q N + L + Q P PSTP A++ V R R + P
Sbjct: 152 SMTPVPSCDAMEPSSSQENMDGTGLKVAQDSLPSPSTP--AETVTPQVSRSRPVL--PSS 207
Query: 118 KAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSFKKVVV 177
+G + V Y + D+ D ++I RR + V
Sbjct: 208 SPTRKG----------RKAVNYAEPSDDEDDDPFDRIRAAG--------TRRRTKTPAVP 249
Query: 178 EDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVD--LVDEQENKVLRGRKRK- 234
DD + + ED S+D D EDEE+D +V ++ + R +KRK
Sbjct: 250 ADDGD--DYEDAASNDGPD----------------EDEEMDDFVVSDESDAPSRSKKRKR 291
Query: 235 ---------------SSGVKKSKS-DGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMG 278
SS +K+ ++ D + + + S + + +++ G
Sbjct: 292 PETTKKTQSRKKTTVSSPIKEEETADEDEMMEELPSTSTAQQWRYDPNSVASSAPRSAQG 351
Query: 279 DVSERFSA-READKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSE 329
R +A + +K H P+ R D + PGD YDP ++Y+PP S
Sbjct: 352 PAVRRPAASKRKEKAHATEPEARYPWLANIQDINKNSPGDPEYDPSSVYIPPGAWNKFSP 411
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFS 388
+KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 412 FEKQYWEIKQKLWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLD 471
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-----KDKVVKREICAVVTKGTLTEG 443
M V + KGY+V V+Q E+ E+R + S DK+++RE+ V+T GTL +G
Sbjct: 472 MWVNQFVAKGYKVARVDQMESALGKEMRERGDTSAKAKKADKIIRRELACVLTGGTLVDG 531
Query: 444 ELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLC 501
+L + A++ + ES + SPA FGI VD AT + + + DD D +
Sbjct: 532 SMLQDDL-ATFCACIKESVIDGSPA-------FGITFVDCATGQFFISEFEDDADLTKFE 583
Query: 502 CLLSELRPVEIIKPANMLSPETERAILRHTRNPLV--NDLVPLSEFWDAETTVLEIKNIY 559
+++ P E+I + +S + R IL++ +P+ N L P +EF DA+ + EI +
Sbjct: 584 TFVAQTSPRELILEKSRISTKALR-ILKNNTSPMTIWNYLKPATEFLDADMSRREISS-- 640
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
A DG P L++ ++S+LGG + YLK
Sbjct: 641 ---------------GGYFANEDGEETWPDALAQ----AKDKDLLMSSLGGLIHYLKFLK 681
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
++ +LL FE + + + ++LD L NLE+F N+ +G GTL+ LN C
Sbjct: 682 IEGSLLSQGNFEW-----YTPIRRNGTLILDGQTLINLEIFANTVNGGPEGTLFTLLNRC 736
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT FGKRL R W+ PL + I ER DAV L ++ +F ++++PD+ERL++R
Sbjct: 737 VTPFGKRLFRQWVCHPLCDIKRINERLDAVDMLNS-DRSVREQFSSQMTKMPDLERLISR 795
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ A+ + ++F+ L G E ++ LGA + +
Sbjct: 796 IHAT------------------LCKPEDFVRVLEGFEQIEYTMGLLGAF--GGGNGLIDR 835
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
+L +P + L ++K AFD +A + +IP G++ D+D++ +++EI+ L
Sbjct: 836 LLA---SMPNLNEPLSYWKTAFDRKKARDEKLLIPERGIEEDFDNSQDRIEEIKEELQSL 892
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
L ++ L +I + IGK++Y +E P++++ VP ++ S+ RY+ + L+
Sbjct: 893 LGRKKSELKCKTIKFTDIGKEIYQIEAPKAVK--VPNNWRQMSATASVKRYYFEELTDLV 950
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQS 979
EL +AE +K + R +F ++ W Q + + L ++ SL A L
Sbjct: 951 RELQEAEETHSQIVKEVATRFFQRFDADYDTWSQSIRIISQLDCLV---SLSKASSSLGE 1007
Query: 980 NSCSSEM 986
SC E
Sbjct: 1008 PSCRPEF 1014
>gi|340518207|gb|EGR48449.1| DNA repair protein [Trichoderma reesei QM6a]
Length = 1205
Score = 301 bits (770), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 217/712 (30%), Positives = 357/712 (50%), Gaps = 72/712 (10%)
Query: 280 VSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
V E+ +E D+ + + RD ++R P D YDPRT+++PP S +KQ+WE K
Sbjct: 273 VKEKAYMKEPDERYPWLANIRDKEKRPPTDPDYDPRTIFIPPGAWAKFSPFEKQYWEIKQ 332
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
D ++FFK GKFYEL+E DA +G +E D + + G PE + V + K
Sbjct: 333 DLWDTIVFFKKGKFYELYEKDATIGHQEFDFKMTDRVNMRMVGVPEGSLDHWVNQFIAKQ 392
Query: 399 YRVLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYL 455
Y+V VEQ ET E+R R++K K DKV+ R++ ++T GTL +G +L + A+Y
Sbjct: 393 YKVARVEQMETNLGKEMRERQDKSGKKADKVISRKLGCILTAGTLVDGSMLQDDM-AAYC 451
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ ES + PA FGI D AT + L +DD+D + L++++ P E++
Sbjct: 452 VAIKESVVDDLPA-------FGIAFTDTATGKFFLSGFVDDVDRTKFETLIAQIGPRELL 504
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+ LS ++ R IL++ +P + L P +EFWDA+T+ E+ + KA+
Sbjct: 505 LEKSGLSTKSLR-ILKNNTSPTTIWTHLKPGTEFWDADTSRRELS------CGKYFLKAE 557
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
P L EL V+SA+GG + YL+ L+ LL FE
Sbjct: 558 GEEE---------EVWPEALQEL----KDNDLVMSAIGGLVSYLRFLKLEAPLLSQGNFE 604
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLE+F N+ +G++ GTL+ LN C+T FGKRL R W
Sbjct: 605 V-----YKPIQKNGTLVLDGQTLTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQW 659
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRN 750
+A PL + I ER DAV L + P E F L ++PD+ERL++R+ A +
Sbjct: 660 VAHPLCDIARINERLDAVELLN--DDPSVREQFASQLVKMPDLERLISRIHAGA------ 711
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
+ ++F+ L G E ++ + +GA + L +++ +P +
Sbjct: 712 ------------CKPEDFVRVLEGFEQIEYTMTLVGAF--KGGNGLLDRLIS---SMPNL 754
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
L ++ AFD A +IP GVD D+D++ +++EI++ L L E++ L
Sbjct: 755 EEPLAYWSTAFDRRRAKEEKLMIPESGVDEDFDASVARIEEIKSQLDDLLAEKKTELKCK 814
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
++ + IGK++Y +E P+S++ +P + S+ K R++ + L+ EL +AE
Sbjct: 815 TLKFTDIGKEIYQIEAPKSVK--IPSSWRQMSATKDVKRWYFTELTTLVRELQEAEETHS 872
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
++ + R +F + W + + A L ++ SL A + L SC
Sbjct: 873 QLIREVASRFCKKFDVDYETWLKAIKIIAQLDCLV---SLAKASMSLGEPSC 921
>gi|440636963|gb|ELR06882.1| hypothetical protein GMDG_08173 [Geomyces destructans 20631-21]
Length = 1123
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 212/695 (30%), Positives = 336/695 (48%), Gaps = 72/695 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D R P YDPRT+Y+PP+ S +KQ+W+ K K + ++FFK GKFYEL+E D
Sbjct: 202 DMDRNPPDHPDYDPRTVYIPPNAWTGFSAFEKQYWQIKQKFWNTIVFFKKGKFYELYEND 261
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KGY++ V+Q E+ E+R +E
Sbjct: 262 ATIGHQLFDLKLTDRVNMRMVGVPESSLDHWANQFVAKGYKIARVDQMESALGKEMRERE 321
Query: 420 K---GSK----DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDR 472
G+K DK++ RE+ V+TKGTL EG +L + A+Y +A+ E+ + T
Sbjct: 322 DSVGGAKAKKVDKIIHRELACVLTKGTLVEGSMLEGDM-ATYCVAIKETTMTADDLPT-- 378
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + L + +DD+D + +++ RP E++ + +S + R IL+
Sbjct: 379 -FGIAFVDTATGQFFLSEFVDDVDLTKFETFVAQTRPQELLLEKSCISVKALR-ILKSNT 436
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
+P + N L EFW A+ T E+ G LT PG
Sbjct: 437 SPTTIWNYLKTGKEFWGADVTKREL----------------------DCSGYFLTKEPGA 474
Query: 591 LSELIST---GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYM 647
E +T ++SA G + YL+ LD LL F + + + K +
Sbjct: 475 DEEWPATLMEAKDKEIIMSAFGALVQYLRSLKLDRDLLSQRNF-----AWYSPIQKSTTL 529
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
VLD L NLE+F N+ +GTL+ LN C+T FGKR+ R W+ PL ++ I ER D
Sbjct: 530 VLDGQTLINLEIFANTYDSGQAGTLFKMLNRCITPFGKRMFRQWVCHPLADAKKINERLD 589
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQE 767
AV L + +F ++R+PD+ERL++R+ A V D +
Sbjct: 590 AVDMLNA-DSTLREQFTGQMTRMPDLERLISRIHAG-----------VCRPD-------D 630
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN 827
F+ L G E ++ S LGA + +++ G+P +V L+++K AFD +A
Sbjct: 631 FVRVLEGFEQIEYTMSILGAF--GGGDGIIDRLIS---GMPDLVGPLEYWKTAFDRTKAR 685
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
+ ++P G++ D+D + ++ I+ L KE LG + + +GK++Y LEVP
Sbjct: 686 DERLLVPERGIEEDFDDSEDRILGIKQELFGLKKEWAAKLGTKGVQFKDVGKEIYQLEVP 745
Query: 888 ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
+VP+D+ + SS K RY+ P +K L+ L +A+ +K+ R +F +
Sbjct: 746 VKNSKAVPKDWTMVSSTKSEKRYYFPELKTLVRALQEAQETHGQIVKATAGRFFQRFDKG 805
Query: 948 HNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ W V A L ++ SL A L S SC
Sbjct: 806 YTTWLTAVNIIAQLDCLI---SLARASAGLGSPSC 837
>gi|119180370|ref|XP_001241662.1| hypothetical protein CIMG_08825 [Coccidioides immitis RS]
Length = 1127
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 257/909 (28%), Positives = 416/909 (45%), Gaps = 152/909 (16%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSN--SNPNPNPNSN------------SNRTPSP 63
Q+ I FF +SP P S+ K S+P P P+ N S+R P+
Sbjct: 21 QKSILGFFQPKSSPCTPPATSRTQNVKDEPASSPAPRPSHNRTKASQLSGTQSSHRAPNL 80
Query: 64 SPSPTTPS--PLQSNPKKSRLVIGQ---TPS------PPPSTPAAAKSYGEDVLRKRIRV 112
+PSP++ + P+ + + + Q +P P P+T A + GE + +
Sbjct: 81 TPSPSSDAVEPVSDDLNIEQSTVQQLKGSPEAVDVSLPSPATSANGRD-GEQAENQELPS 139
Query: 113 YWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWVQESVSLLKRLRRDSF 172
P +A K V Y + ++E D+ K + +V + RR
Sbjct: 140 ATPSRRA--------------KKTVDYWESDEE--DVVKPPTR--RSAVGRANKKRR--- 178
Query: 173 KKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRK 232
V +DEE E D S DD + + + DE + ++ RK
Sbjct: 179 -TVATSEDEE------EFQPDESIGDFDDLDDFI------------VPDESDQEMRPSRK 219
Query: 233 RKSSGVKKSKSDGNAVNA---DFKSPIIKPVKIFGSDKLSNGFDN--------PVMGDVS 281
RK S K ++A D + P G+ K N + +S
Sbjct: 220 RKRSSNPKPTKPSTPISAPQDDMDVDLDIPNSASGTAKKWTYDPNDTECRQHRTTLAPLS 279
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
+ ++ +K H P++R D + PG YDPRTLY+PP S +KQ
Sbjct: 280 SKSLGKKKEKAHLTEPEKRYPWLANILDMDKNPPGHPDYDPRTLYIPPLAWSRFSPFEKQ 339
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 340 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEYWAN 399
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ KG+++ V+Q+E+ E+R R +K DKV+KRE+ V+T GTL +G +L +
Sbjct: 400 QFVAKGFKIARVDQSESALGKEMRERDDKKKGDKVIKRELSCVLTAGTLVDGAMLQDDM- 458
Query: 452 ASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
++Y +A+ E+ + PA FG+ VD AT + L + DD+D + L+++ RP
Sbjct: 459 STYCVAVKEALVDDLPA-------FGVSFVDTATGQFFLTEFTDDVDMTKFETLVAQTRP 511
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ +SP+ R IL++ NP + N L P EFWDA TT E+
Sbjct: 512 QELLLEKGFMSPKALR-ILKNNTNPTTIWNYLKPEREFWDASTTRREL------------ 558
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
D++ + D + P +L + V+S+ G + YL+ ++ L+
Sbjct: 559 ---DASEYFVSVDQDNIEAWPEVLRQ----ARDNELVISSFGALIQYLRMLKIERDLITI 611
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLEVF NS G GTL+ LN C+T FGKR+
Sbjct: 612 GNF-----TWYDPIRKASSLVLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRM 666
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ W+ PL +S I R DAV L + +F L+++PD+ERL++R+ A +
Sbjct: 667 FKQWVCHPLMDSKKINARLDAVDALNA-DSSIRDQFSSQLTKMPDLERLISRVHAGT--- 722
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ--LHHILTPGK 805
+ Q+F+ L G E +D S +L+ T S + H+++
Sbjct: 723 ---------------CKCQDFVRVLEGFEQIDYTMS----LLKQTGSGDGVIGHLIS--- 760
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
+P + +L+++K AFD V+A +SG +P GV+ D+D++ ++++EIEA L + LK R+
Sbjct: 761 SMPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRR 820
Query: 866 LLGDTSITY 874
L ++I Y
Sbjct: 821 ELNSSAIIY 829
>gi|347840481|emb|CCD55053.1| similar to DNA mismatch repair protein msh6 [Botryotinia
fuckeliana]
Length = 1213
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 212/699 (30%), Positives = 343/699 (49%), Gaps = 76/699 (10%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
+ RD R PG YDPRTL++PP N + + Q+W+ K K D ++FFK GKFYEL+
Sbjct: 278 NERDIDRNPPGHPDYDPRTLFIPPMAFNNFTPFEAQYWKVKQKCWDTILFFKKGKFYELY 337
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G + DL+ + G PE + + KGY+V V +Q E+ E+R
Sbjct: 338 ERDATIGHQIFDLKLTDRVNMSMVGVPEMSLQHWANQFLAKGYKVAVGDQKESALAKEMR 397
Query: 417 RKE-------KGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS---P 465
+E KG K DK++ RE+ ++T GTL EG +L + A+Y +A+ ES + P
Sbjct: 398 EREDSTGPSSKGKKSDKIIHRELSYILTAGTLVEGSMLQGD-SATYCVAIKESTTNDDLP 456
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
A FGI VD +T + L + DD+D + +++ RP E++ + +S + R
Sbjct: 457 A-------FGISFVDTSTGQFFLTEFTDDVDLTKFETFVAQTRPQELLLEKSCVSTKVLR 509
Query: 526 AILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
IL++ P + N L P EF AE + E+ D + A+G G
Sbjct: 510 -ILKNNTGPTTIWNYLKPEKEFLSAEKSRREL---------------DYGGYFTSADG-G 552
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
P E + ++SA G YLK L++ LL F S + + K
Sbjct: 553 KETWP----EELEKARDKDLLISAFGALFQYLKFLQLEKPLLTQGNF-----SWYNPIQK 603
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+VLD L NLE+F N+ G+S GTLY L+ C T FGKRL R W++ PL + I
Sbjct: 604 GTTLVLDGQTLINLEIFSNTFDGNSDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRIN 663
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
ER DAV L N+ + F+ + S +PD+ERL++R+ A S
Sbjct: 664 ERLDAVDFLNRDNE-LSRSFKSSTSAMPDLERLISRIHAGS------------------C 704
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDW 823
+ ++F+ L G E ++ + + + + + + L +P + L+ +K AFD
Sbjct: 705 RPEDFVKVLEGFEQIEYIQKDI--LGKYSSGDGIFNRLV--ASIPDLAEPLQWWKTAFDR 760
Query: 824 VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYL 883
+A ++P GV+ D+D++ +++EI L LK+ +K + +IGK+++
Sbjct: 761 KKAKEHKILVPERGVEEDFDASQDRIEEINQELASLLKKYQKKFDSKKVELKSIGKEIHQ 820
Query: 884 LEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQ 943
L+VP S++ VP+D+++ S+ GF RY+ P + ++ +L + + +K + R +
Sbjct: 821 LQVPVSIK--VPKDWKVTSAASGFKRYYFPELTNIIRDLQETQETHGQIVKEVASRFYAR 878
Query: 944 FCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
F E + W Q V A L ++ SL A L + SC
Sbjct: 879 FDEDYKTWLQAVKVVAQLDCLV---SLAAASSALGTTSC 914
>gi|156057209|ref|XP_001594528.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980]
gi|154702121|gb|EDO01860.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1246
Score = 300 bits (767), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 214/715 (29%), Positives = 342/715 (47%), Gaps = 76/715 (10%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
E+ S + D+ + + RD R PG YDPRTLY+PP + +KQ+WE K K
Sbjct: 295 EKASKSDPDQRYEWLANERDIDRNPPGHPDYDPRTLYIPPMAFNKFTPFEKQYWEIKQKC 354
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA +G + DL+ + G PE + + KGY+
Sbjct: 355 WDTILFFKKGKFYELYERDATIGHQIFDLKLTDRVNMSMVGVPEMSLQHWANQFLAKGYK 414
Query: 401 VLVVEQTETPEQLELRRKE-------KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA 452
V V +Q E+ E+R +E KG K DK++ RE+ ++T GTL EG +L + A
Sbjct: 415 VAVGDQKESALAKEMREREDSAGPSSKGKKPDKIIHRELSYILTAGTLVEGSMLQ-DDSA 473
Query: 453 SYLMALTES---NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+Y +A+ ES + PA FGI VD +T + L + DD+D + ++++RP
Sbjct: 474 TYCVAIKESITDDNLPA-------FGISFVDTSTGQFFLSEFTDDVDLTKFETFVAQIRP 526
Query: 510 VEIIKPANMLSPETERAILRHTRNPLV--NDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E++ + +S + R IL++ P N L EF AE + E+
Sbjct: 527 QELLLEKSCVSTKVLR-ILKNNTGPTTVWNYLKSEKEFLTAEKSRREL------------ 573
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ A GDG E + ++SA G YLK L++ LL
Sbjct: 574 -----DYGGYFASGDGGK---ETWPEELEKARDNDLLISAFGALFQYLKVLQLEKALLTQ 625
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + + K +VLD L NLE+F N+ G++ GTLY L+ C T FGKRL
Sbjct: 626 GNF-----AWYNPIQKGTTLVLDGQTLINLEIFSNTFDGNTDGTLYTLLDRCTTPFGKRL 680
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
R W++ PL + I ER DAV L + + F+ + S LPD+ERL++R+ A S
Sbjct: 681 FRQWVSHPLSDIKRINERLDAV-DLLNKDDNLSRSFKSSTSTLPDLERLISRIHAGS--- 736
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL 807
+ ++F+ L G E ++ + + + T +
Sbjct: 737 ---------------CRPEDFLKVLEGFEQIEYIQKEILGNYSGGDGVFSRLVAT----I 777
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + L+ +K+AFD +A ++P GV+ D+D++ +++EI L LK+ +K
Sbjct: 778 PNLADPLQWWKNAFDRKKAKEDKILVPERGVEEDFDASQDRIEEIHQELASLLKKYQKKY 837
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
I + IGK++Y L++P S++ VP D+++ S+ GF RY+ P + ++ +L + +
Sbjct: 838 DSKKIEFKNIGKEIYQLQMPVSIK--VPNDWKMMSAASGFKRYYFPELTNIIRDLQETQE 895
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+K + R +F E + W Q V A L + SL A L + SC
Sbjct: 896 THGQIVKQVASRFYARFDEDYEIWLQAVKTVAQLDCLF---SLAAASSALGTPSC 947
>gi|327296443|ref|XP_003232916.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
gi|326465227|gb|EGD90680.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
Length = 1217
Score = 299 bits (765), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 210/684 (30%), Positives = 342/684 (50%), Gaps = 74/684 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDPRTLY+PP S +KQ+WE K K D V+FFK GKFYEL+E DA +G + DL+
Sbjct: 302 YDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLK 361
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-RKEKGSK------ 423
+ G PE + + KG+++ V+Q+E+ E+R R++KG+K
Sbjct: 362 LTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQK 421
Query: 424 -DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVD 480
DKV+KRE+ V+T GTL EG ++ + ++Y +A+ E+ + PA FGI VD
Sbjct: 422 EDKVIKRELACVLTTGTLVEGSMIQGDM-STYCVAIKEAIIDGLPA-------FGISFVD 473
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVND 538
AT + L Q +DD+D + +++ RP E++ +++S + R IL++ P L N
Sbjct: 474 TATGQFFLSQFVDDVDMTRFETFVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNY 532
Query: 539 LVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG 598
L P EFW+A+ TV E+ + +E N A + Q D EL
Sbjct: 533 LKPGKEFWEADVTVREL-DAGGYFVSEDKNHASAWPQALQDSRD---------KEL---- 578
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
V+SA G L YL+ + L+ F + + + K +VLD L NLE
Sbjct: 579 -----VMSAFGALLQYLEMLKIGRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLE 628
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
VF N+ G S GTL+ LN CVT FGKRL + W+ PL + I R DAV L +
Sbjct: 629 VFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLDAVESLNA-DST 687
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
+F L+++PD+ERL++R+ A + + Q+F+ L G E +
Sbjct: 688 VREQFSSQLTKMPDLERLISRVHAGT------------------CKAQDFVRVLEGFEQI 729
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
+ ++G + E L L +P + +LK ++ AFD +A ++P V
Sbjct: 730 EY---TMGLLKEAGSGHGLIGQLI--SAMPDLNGLLKFWETAFDRAKARECDILVPEESV 784
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
+ ++D++ K ++++E L + L+ RK L ++I + GK++Y LEVP ++ ++P+ +
Sbjct: 785 EEEFDASKKNIEQLEDELEQVLQRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSW 843
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
+ S+ K RY+ P ++ L+ +L +A +K + R +F + ++ W +
Sbjct: 844 DQMSATKQVKRYYFPELRALIRKLQEARETHAQVVKGVAGRFYARFDKDYSSWLASIKII 903
Query: 959 AGLTLILLDGSLLHAFLILQSNSC 982
A L ++ L A L SC
Sbjct: 904 AQLDCLI---GLAKASTALGHPSC 924
>gi|358390700|gb|EHK40105.1| hypothetical protein TRIATDRAFT_252385 [Trichoderma atroviride IMI
206040]
Length = 1184
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 223/739 (30%), Positives = 360/739 (48%), Gaps = 83/739 (11%)
Query: 253 KSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYY 312
K P+++P+ D++S +P V E+ +E + + RD +R P D Y
Sbjct: 236 KQPVVRPI-----DRVST--KDP---KVKEKAYMKEPGERYPWLATIRDKDKRLPDDPDY 285
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPRTL++PP S +KQ+WE K D ++FFK GKFYEL+E DA +G +E D +
Sbjct: 286 DPRTLFIPPGAWNKFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYEKDATIGHQEFDFKM 345
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+ G PE + V + K Y+V VEQ ET E+R +E S DKV+
Sbjct: 346 TDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETNLGKEMREREDKSGKKADKVIS 405
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRI 486
R++ V+T GTL +G +L + A+Y +++ ES + PA FGI D AT R
Sbjct: 406 RKLGCVLTAGTLVDGSMLQDDM-AAYCVSIKESIVDDLPA-------FGIAFTDTATGRF 457
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSE 544
L +DD+D + L++++ P E++ + L+ +T R IL++ +P + +L P +E
Sbjct: 458 FLSGFVDDVDRTRFETLIAQIGPRELLLEKSGLATKTLR-ILKNNTSPTTIWTNLKPGTE 516
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
FWDA+T+ E+ + E D P L EL V
Sbjct: 517 FWDADTSRKELSCAKYFVKGE----------------DEEEVWPEALQEL----RDDDLV 556
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
+SA+GG YL+ L+ LL FE+ + + K +VLD L NLE+F N+
Sbjct: 557 MSAVGGLTSYLRFLKLEGPLLSQGSFEI-----YKPIQKNSTLVLDGQTLTNLELFSNTV 611
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-F 723
+G++ GTL+ LN C+T FGKRL R W+A PL N I ER DAV L + P E F
Sbjct: 612 NGNTDGTLFGLLNKCITPFGKRLFRQWVAHPLCNIDRINERLDAVELLN--DDPSVREQF 669
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
L ++PD+ERL++R+ A A K ++F+ L G E ++
Sbjct: 670 ASQLVKMPDLERLISRIHAG----------------ACKP--EDFVRVLEGFEQIEYTM- 710
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
+L A + + +++ +P + L ++ AF+ +IP G+D D+D
Sbjct: 711 TLAAAFKGGNG-LIDRLIS---SMPNLEEPLAYWSTAFNRQRVKEEKLMIPESGIDEDFD 766
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
++ +++EI+ L L E++ L ++ Y +GK++Y +E P++ + +P + S+
Sbjct: 767 ASAARIQEIKDQLNDLLIEKKGELKCKTLKYTDVGKEIYQIEAPKAAK--IPSSWRQMSA 824
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
K R++ P + L+ EL +AE ++ I R +F + W + + A L
Sbjct: 825 TKDVKRWYFPQLTALVRELQEAEETHSQLIREIASRFCRKFDADYETWLKSIQIVAQLDC 884
Query: 964 ILLDGSLLHAFLILQSNSC 982
++ SL A L SC
Sbjct: 885 LV---SLAKASSSLGEPSC 900
>gi|430813560|emb|CCJ29107.1| unnamed protein product [Pneumocystis jirovecii]
Length = 826
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 200/664 (30%), Positives = 317/664 (47%), Gaps = 92/664 (13%)
Query: 272 FDNPVMGDVSERFSAREADKFHFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEG 330
F+N E S + ++ + FL P+ RRDA YD RTLY+PP ++
Sbjct: 221 FNNQETKQHFEDISDKNSENYMFLLPEYRRDADGNLSSSPNYDERTLYIPPSAYKSFKPF 280
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQPHCGFPERNFS 388
+KQ+W+ K K MD V+FF+ GKFYEL+++DA +G + +L+ G G PE N+
Sbjct: 281 EKQYWDIKCKFMDTVVFFQKGKFYELYQLDADIGHQLFNLKMTDRVGTMRMVGIPEANYE 340
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRK-EKGSKDKVVKREICAVVTKGTLTEGELLS 447
K K +++ V+Q E+ E+R K K ++KVV+RE+ V+T GTL ++
Sbjct: 341 YWASKFIAKNFKIARVDQLESALSKEMRDKISKTKEEKVVRRELVQVLTSGTLVNEGIIK 400
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
+ ++Y MA+ E + SQ CFG+C +D + + DD + L L++++
Sbjct: 401 SEM-STYCMAIKEDYKMDKSQI---CFGVCFIDASVGHFNITYFEDDFIRTKLHTLITQI 456
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLV-PLSEFWDAETTVLEIKNIYNRITAES 566
RP E+I ++P+T + + N ++ + + P EFW+ +TT EI
Sbjct: 457 RPKELILEKGNVTPQTIKLLKNSGINEMICNFIKPNIEFWNEQTTESEI----------- 505
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+ N E + P L + LS++GG ++YLK +D+TL
Sbjct: 506 -------LMNGYFENNDYKSWPSALQK----ARDYPLALSSVGGLIWYLKTLKMDKTLCT 554
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
FE + + K ++LD L+NLE+F NS G + GTL LN C+T FGKR
Sbjct: 555 LGNFEW-----YDPIQKTSSLILDGQTLKNLEIFNNSYDGGTEGTLIKLLNRCITPFGKR 609
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK----ALSRLPDMERLLARLFA 742
L R WL PL + I ER DAV L L RK + LPD+ER+++R+ A
Sbjct: 610 LFRLWLCHPLRSVKDINERLDAVELLND------LSIRKIIIDSFKTLPDLERMISRIHA 663
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI-- 800
+ C+ D C G NT L H+
Sbjct: 664 KN------------------------------CKSKDFVCVLEGF---NTIYCTLEHLSK 690
Query: 801 -LTPGKGL--------PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
+ P GL P +V+IL ++ F+W + + +IP+ G++ ++D + K+K
Sbjct: 691 NIKPNNGLLWNIINNIPNLVNILDEWQKIFNWQKCKSEDMLIPNPGIEKEFDDSQDKIKA 750
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
IE L + K+ + IT+ IGK++Y LE+P+S++ VP + SS K RYW
Sbjct: 751 IENELFQMEKDYKNQFKSPQITFRNIGKEIYQLEIPKSIK--VPSSWIKLSSTKSVNRYW 808
Query: 912 TPNI 915
+P +
Sbjct: 809 SPEL 812
>gi|358054512|dbj|GAA99438.1| hypothetical protein E5Q_06137 [Mixia osmundae IAM 14324]
Length = 1242
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 218/703 (31%), Positives = 347/703 (49%), Gaps = 82/703 (11%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RDA + RPG YDP TLY+P + NL++ ++Q+WE K H D V+FF+
Sbjct: 316 DAFEFL-VDPRDANKNRPGHADYDPSTLYVPTKAMENLTQFEQQFWEIKKNHFDTVLFFQ 374
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G E L+ + + G PE F K +GY+V V+Q E
Sbjct: 375 KGKFYELYENDARIGHSEFGLKLTDRVKMCMVGVPEATFDFWAAKFLAQGYKVGRVDQAE 434
Query: 409 TPEQLELRRK------EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
T +E+R K EK S K+V+RE+ V+T GT+ + +LS + + + +A+ E
Sbjct: 435 TAIGMEMRHKDAKSAGEKASSKKIVQRELNCVLTSGTIVDERMLSDDL-SQHCIAIREYT 493
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
S +++ FG+CV+D +T+ + DD+ + L L LRP E++ LS
Sbjct: 494 PSSSARPQ---FGLCVLDASTAEFRIIAFADDICRTKLETTLRLLRPRELVHERVNLSQA 550
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDA--ETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
T R ILR +++PL W+A + K +RI A ++N+A
Sbjct: 551 TTR-ILR--------NVLPLQCTWNALKAADFADGKGDIHRIFA-AVNRA---------- 590
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
+P ++++ Q +SALGG + YL+ LD+ L+ F+L F
Sbjct: 591 ------VPAPITQIY----DNEQAMSALGGLIAYLRSLNLDKDLVTTGNFQL-----FDP 635
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
+ MVLD L +LEV +NS+ G S GTL + L+ CVT FG R+L+ W+ +PL +
Sbjct: 636 VRSGERMVLDGQTLAHLEVLQNSQGG-SEGTLISLLSRCVTPFGTRMLKGWVCQPLRAAS 694
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA 760
I R + VA L + FA F KA +PD+ERL++R+ A +
Sbjct: 695 AINARLEIVACLIE-HADFANTFEKATKTMPDLERLISRIHAGT---------------- 737
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDA 820
+ ++F + E +D+ LG+I + + L + P +V +++ +
Sbjct: 738 --IKTKDFDRVVTCFEQIDRLLGRLGSIAKTLPAAGLAQTIASA---PDLVPLVEKLRGL 792
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG-K 879
F E ++P G D YD V IE L L + R+ L +T+ IG K
Sbjct: 793 FQVEE----HELVPLSGADTLYDDCVDAVVAIEKDLYDCLSQYRRNLKSNDLTFKDIGTK 848
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
++Y ++VP ++ VP ++ S K + RY++P ++KL+ +L +A + +A+K R
Sbjct: 849 EIYQVQVPVKIK--VPSNWTQMSKTKDWHRYYSPEVEKLVRQLKEARERRNAAIKQFKGR 906
Query: 940 LIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
L F +H++ W Q V A + +L SL + L SC
Sbjct: 907 LCAAFDQHYDIWLQAVKLIAEIDCLL---SLAKSSAALGEPSC 946
>gi|367031666|ref|XP_003665116.1| hypothetical protein MYCTH_2308482 [Myceliophthora thermophila ATCC
42464]
gi|347012387|gb|AEO59871.1| hypothetical protein MYCTH_2308482 [Myceliophthora thermophila ATCC
42464]
Length = 1210
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 205/689 (29%), Positives = 341/689 (49%), Gaps = 70/689 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D + PG +DP ++Y+PP R S +KQ+W+ K D ++FFK GKFYEL+E D
Sbjct: 299 DGNKNPPGHPDFDPTSIYIPPMAERGFSPFEKQYWDIKKNLWDTIVFFKKGKFYELYEND 358
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + M V + KGY+V V+Q E+ E+R +E
Sbjct: 359 ATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESALGKEMRERE 418
Query: 420 KGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFG 475
+K DKV++RE+ ++T GTL +G +L + A+Y A+ ES N PA FG
Sbjct: 419 SNAKKADKVIRRELSCILTAGTLVDGSMLQDDM-ATYCAAIKESVVNDKPA-------FG 470
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP- 534
I VD AT + L + DD+D + +++ P E++ + LS R IL++ P
Sbjct: 471 IAFVDAATGQFFLSEFEDDVDLTKFETFVAQTSPRELLLEKSRLSTRALR-ILKNNTGPT 529
Query: 535 -LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
+ N L P +EFWDAE T E+ + S EG G+ E
Sbjct: 530 TIWNYLKPGTEFWDAELTRREL---------------ECGGYFSTEEGK-----EGVWPE 569
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
++ +SALGG YL+ LD++LL F + + + + ++LD +
Sbjct: 570 KLNEAKDKDLAMSALGGLTHYLRLLKLDQSLLSQGNF-----TWYSPIHRNGTLILDGQS 624
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLE+F N+ +G GTL+ LN C+T FGKRLLR W+ PL + I ER DAV L
Sbjct: 625 LINLEIFANTVNGGPEGTLFNLLNRCITPFGKRLLRQWVCHPLCSIEKINERLDAVDMLN 684
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
++ +F ++++PD+ERL++R+ A + + ++F+ L
Sbjct: 685 A-DRSILQQFSSQMAKMPDLERLISRIHAGA------------------CRPEDFVRVLE 725
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
G E +D LGA + + ++ +P + L +++ AFD +A + +I
Sbjct: 726 GFEQIDYVMGLLGAF--GGGNGLVDKLIA---SMPNLKEPLGYWETAFDRRKARDEKLLI 780
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
P G++ D+D++ ++ I L L+ Q+ L ++ + +GK++Y +EVP++++
Sbjct: 781 PEKGIEEDFDNSLNELDRIRDELHALLERQKTALKCKTLKFTDVGKEIYQIEVPKAVK-- 838
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S+ RY+ ++ L+ EL +AE +K + R +F ++ W Q
Sbjct: 839 VPASWRQMSATSTVKRYYFRELEDLVRELQEAEETHSQIVKEVASRFFKRFDVDYDIWLQ 898
Query: 954 MVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ A L ++ SL + L + SC
Sbjct: 899 AIRIIAQLDCLI---SLAKSSSALGTPSC 924
>gi|326477690|gb|EGE01700.1| DNA mismatch repair protein msh6 [Trichophyton equinum CBS 127.97]
Length = 1215
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 217/722 (30%), Positives = 355/722 (49%), Gaps = 82/722 (11%)
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
E S+ + K H P+ R D + G YDPRTLY+PP S +KQ
Sbjct: 262 ETHSSIKQKKAHMTEPENRYPWLANIMDMDKNPLGHPDYDPRTLYIPPLAWSKFSPFEKQ 321
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 322 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 381
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 382 QFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQKEDKVIKRELACVLTTGTLVEGS 441
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ E + PA FGI VD AT + L Q +DD+D +
Sbjct: 442 MIQGDM-STYCVAIKEVIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 493
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV E+ + +
Sbjct: 494 FVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVREL-DAGD 551
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+E NKA + P L + V+SA G L YL+ +
Sbjct: 552 YFVSEDKNKA--------------SAWPQALQD----ARDKDLVMSAFGALLQYLEMLKI 593
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 594 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFHLLNRCV 648
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 649 TPFGKRLFKQWVCHPLMDIKKINARLDAVESL-NADSTVREQFSSQLTKMPDLERLISRV 707
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 708 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGHGLIGQ 746
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +L+ ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 747 LI--SAMPDLNGLLQFWETAFDRAKARESDILVPEEGIEEEFDASKKNIEQLEEELEQVL 804
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 805 QRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 863
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSN 980
+L +A +K + R +F ++ W V A L ++ L A L
Sbjct: 864 KLQEARETHAQVVKGVAGRFYARFDRDYSSWLAAVKIIAQLDCLI---GLAKASTALGHP 920
Query: 981 SC 982
SC
Sbjct: 921 SC 922
>gi|326473228|gb|EGD97237.1| DNA mismatch repair protein Msh6 [Trichophyton tonsurans CBS
112818]
Length = 1215
Score = 296 bits (758), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 217/722 (30%), Positives = 355/722 (49%), Gaps = 82/722 (11%)
Query: 282 ERFSAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
E S+ + K H P+ R D + G YDPRTLY+PP S +KQ
Sbjct: 262 ETHSSIKQKKAHMTEPENRYPWLANIMDIDKNPLGHPDYDPRTLYIPPLAWSKFSPFEKQ 321
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+WE K K D V+FFK GKFYEL+E DA +G + DL+ + G PE +
Sbjct: 322 YWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWAN 381
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKEKGSK-------DKVVKREICAVVTKGTLTEGE 444
+ KG+++ V+Q+E+ E+R R++KG+K DKV+KRE+ V+T GTL EG
Sbjct: 382 QFVAKGFKIARVDQSESALSKEMREREDKGNKMGKAQKEDKVIKRELACVLTTGTLVEGS 441
Query: 445 LLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
++ + ++Y +A+ E + PA FGI VD AT + L Q +DD+D +
Sbjct: 442 MIQGDM-STYCVAIKEVIIDGLPA-------FGISFVDTATGQFFLSQFVDDVDMTRFET 493
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYN 560
+++ RP E++ +++S + R IL++ P L N L P EFW+A+ TV E+ + +
Sbjct: 494 FVAQTRPQELLLEKSVMSTKALR-ILKNNTGPTTLWNYLKPGKEFWEADVTVREL-DAGD 551
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+E NKA + P L + V+SA G L YL+ +
Sbjct: 552 YFVSEDKNKA--------------SAWPQALQD----ARDKDLVMSAFGALLQYLEMLKI 593
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L+ F + + + K +VLD L NLE+F N+ G S GTL+ LN CV
Sbjct: 594 GRDLITIGNF-----TWYDPIKKASSLVLDGQTLINLEIFANTYDGSSEGTLFHLLNRCV 648
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FGKRL + W+ PL + I R DAV L + +F L+++PD+ERL++R+
Sbjct: 649 TPFGKRLFKQWVCHPLMDIKKINARLDAVESLNA-DSTVREQFSSQLTKMPDLERLISRV 707
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
A + + Q+F+ L G E ++ ++G + E L
Sbjct: 708 HAGT------------------CKAQDFVRVLEGFEQIEY---TMGLLKEAGSGHGLIGQ 746
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L +P + +L+ ++ AFD +A S ++P G++ ++D++ K ++++E L + L
Sbjct: 747 LI--SAMPDLNGLLQFWETAFDRAKARESDILVPEEGIEEEFDASKKNIEQLEEELEQVL 804
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
+ RK L ++I + GK++Y LEVP ++ ++P+ ++ S+ K RY+ P ++ L+
Sbjct: 805 QRTRKELKCSTIVFKDNGKEIYQLEVPIKIK-NIPKSWDQMSATKQVKRYYFPELRALIR 863
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSN 980
+L +A +K + R +F ++ W V A L ++ L A L
Sbjct: 864 KLQEARETHAQVVKGVAGRFYARFDRDYSSWLAAVKIIAQLDCLI---GLAKASTALGHP 920
Query: 981 SC 982
SC
Sbjct: 921 SC 922
>gi|116203755|ref|XP_001227688.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
gi|88175889|gb|EAQ83357.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
Length = 1221
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 198/668 (29%), Positives = 333/668 (49%), Gaps = 68/668 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D + PG +DP ++Y+PP R S +KQ+W+ K K D V+FFK GKFYEL+E D
Sbjct: 313 DGNKNPPGHPEFDPTSIYIPPLAERGFSPFEKQYWDIKKKLWDTVVFFKKGKFYELYEND 372
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + M V + KGY+V V+Q E+ E+R ++
Sbjct: 373 ATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESALGKEMRERD 432
Query: 420 KGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFG 475
+K DK+++RE+ ++T GTL +G +L + A+Y A+ ES N PA FG
Sbjct: 433 SNAKKADKIIRRELACILTGGTLVDGSMLQDDM-ATYCAAIKESVVNDKPA-------FG 484
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP- 534
I VD AT + L + DD+D + +++ P E++ + LS + R IL++ P
Sbjct: 485 IAFVDAATGQFFLSEFEDDVDLTKFETFVAQTSPRELVLEKSRLSTKALR-ILKNNTGPT 543
Query: 535 -LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
+ N+L P +EFW A+ E++ ++ EG P L+E
Sbjct: 544 TIWNNLKPETEFWGADLARRELECGGYFVS----------------EGGAEEVWPKTLAE 587
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+SA+GG YL+ LD LL F + + + + ++LD +
Sbjct: 588 ----SKDKDLAISAMGGLTHYLRVLMLDRNLLSQGNF-----AWYNPIHRNGTLILDGQS 638
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLE+F N+ + GTL+ LN C+T FGKRL R W+ PL N+ I ER DAV L
Sbjct: 639 LINLEIFTNTANNGPEGTLFNLLNRCITPFGKRLFRQWVCHPLCNTQKINERLDAVDML- 697
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
++ +F ++++PD+ERL++R+ A + + Q+F+ L
Sbjct: 698 NADRSILQQFSSQMAKMPDLERLISRIHAGA------------------CRPQDFVRVLE 739
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
G E +D LGA + + ++ +P + L +++ AFD A + G++I
Sbjct: 740 GFEQIDYTMGLLGAF--GGGNGLVDRLIA---SMPDLKEPLGYWETAFDRTMARD-GKLI 793
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
P G++ D+D++ +++ I+ L L++Q+ L +I + +GK++Y +EVP++++
Sbjct: 794 PEKGIEEDFDNSQNELERIKGELHALLEKQKTALKCKTIKFTDVGKEVYQIEVPKAVK-- 851
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP ++ S+ RY+ ++ L+ EL + E LK + R +F + W Q
Sbjct: 852 VPTNWRQMSATSAVKRYYFRALEDLVRELQETEETHSQILKEVASRFSKRFDMDYEVWLQ 911
Query: 954 MVAATAGL 961
+ A L
Sbjct: 912 AIRIIAQL 919
>gi|308805174|ref|XP_003079899.1| putative mismatch binding protein Mus3 (ISS) [Ostreococcus tauri]
gi|116058356|emb|CAL53545.1| putative mismatch binding protein Mus3 (ISS) [Ostreococcus tauri]
Length = 742
Score = 295 bits (756), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 256/443 (57%), Gaps = 53/443 (11%)
Query: 276 VMGDVS-ERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDF--LRN----- 326
V+G V E+++ARE KF FL P+ +DAK RRP D YDP +L LP F LR+
Sbjct: 163 VLGGVGPEQYAARERLKFTFLQPENIKDAKGRRPSDPDYDPSSLLLPSTFPKLRDANGQP 222
Query: 327 --LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPE 384
+S GQ QWW FK+ + D V+ FKMGKFYE+FEMDAH+G ++L L YM+G+QPH GFPE
Sbjct: 223 WTVSPGQAQWWRFKAANFDSVLLFKMGKFYEMFEMDAHIGVRDLGLMYMRGDQPHAGFPE 282
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQL-ELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+N++M+ E+LARKG+RV+ +EQTETP+QL E +RK+K KD VV+RE+ V+TKGT+ +
Sbjct: 283 KNYAMHAEQLARKGHRVVCIEQTETPDQLAERKRKDKTCKDTVVRREMVQVLTKGTMVDT 342
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+L+++PDA+Y+ ++ + G+C D T R ++G DD S L
Sbjct: 343 GMLNSSPDAAYVCSIVDGGVEDDGDGW---VGLCAADCGTGRFLVGAWRDDEGASCLRTA 399
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ELRPVEI+ P + +S T A VLE+ + + T
Sbjct: 400 LAELRPVEILVPPSGMSTRTNGA-------------------------VLEMCSSAQQRT 434
Query: 564 AESLNKADSNVANSQAEG---DGLTCLPGILSELISTG-DSGSQV-LSALGGTLFYLKKS 618
++ + AD+ + + + EG + + LP + EL T D + +SA G + YL+ +
Sbjct: 435 FKTTSAADA-IQDVETEGYFKNLKSGLPAAIKELRDTACDPARECGISAWGTIVAYLRAA 493
Query: 619 FLDETLLRFAKFELLPCS------GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+D L+ + E L + A ++ +DA AL LEV EN+ +G S+GTL
Sbjct: 494 LIDADLVPQGRIESLHTTEADTREQLARWAHSSHVAMDAAALSGLEVLENT-AGGSAGTL 552
Query: 673 YAQLNHCVTAFGKRLLRTWLARP 695
A L+ C + G+RLLR W+ RP
Sbjct: 553 LASLDRCASGPGRRLLRRWVCRP 575
>gi|354544901|emb|CCE41626.1| hypothetical protein CPAR2_801760 [Candida parapsilosis]
Length = 1244
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 209/712 (29%), Positives = 347/712 (48%), Gaps = 66/712 (9%)
Query: 264 GSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDF 323
S ++ F + + F+ +++ +L + +DA++R P D YDPRTLY+P
Sbjct: 280 ASGYVTKQFSSKPLPTTKRNFAKENEERYQWL-VNIKDAEKRSPDDPNYDPRTLYIPQSA 338
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---C 380
+ +KQ+WE KSK + V+FFK GKFYEL+E DA + + DL+ G + +
Sbjct: 339 WSKFTAFEKQYWEIKSKMWNTVVFFKKGKFYELYENDAIIANTQFDLKIAGGGRANMKLA 398
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKD-KVVKREICAVVTKGT 439
G PE +F ++ GY+V V+Q E+ E+R GSK+ K++KRE+ V+T GT
Sbjct: 399 GIPEMSFEHWAKEFISHGYKVAKVDQKESMLAKEMRGG--GSKEEKIIKRELTGVLTGGT 456
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
LT ++++ + ++Y +++ E A + + FG+ VD ATS + L ++ DD +C+
Sbjct: 457 LTNLDMITDDM-STYCLSIKEE----ACEDGSKIFGVAFVDTATSELNLIELYDDAECTK 511
Query: 500 LCCLLSELRPVEII-KPANMLSPETE-RAILRHTRNPLVNDLVPLSEFWDAETTVLE-IK 556
L L+++++P E+I + N+ + T+ H+ N + N+L P++EFWD + V + +K
Sbjct: 512 LDTLITQVKPKEVICEKGNLCNIATQVLKFCAHSNNQIWNNLNPITEFWDYDVAVEQLVK 571
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ Y AE + D + P +L + +A GG L YLK
Sbjct: 572 SKY--YDAEDM--------------DDFSKYPEVL---VDFKKRHFVAFNAFGGLLSYLK 612
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
LDE+++ S + +M+LD L NLE+ N+ G GTL +
Sbjct: 613 TLKLDESIMSLGNIRQYKISE----NETSHMILDGITLSNLEILNNNYDGGDQGTLLKLV 668
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
N T FGKR L+ W+ PL I R D++ L + L+ LPD+ERL
Sbjct: 669 NRATTPFGKRHLKKWILHPLMRIDEISSRYDSIDYLMSDGSELRSTLQDCLTALPDLERL 728
Query: 737 LARLFASSEANGRNSNKVV-LYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTE 793
+AR+ + R+ KVV +E A+ KQL EF + C L L++
Sbjct: 729 IARVHGGT-LRFRDFLKVVESFESIARFSKQLLEFANV---------ECGVLYKYLQSFP 778
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+ HI ++DAFD +A N IIP GVD ++D + + +E
Sbjct: 779 QDMVEHI--------------SEWEDAFDRQQAVND-IIIPAKGVDAEFDKSQGVIDGLE 823
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L + LK +K I Y GK++YL+E+P L VP+ ++ + RYW+P
Sbjct: 824 NQLNELLKGYKKDFKSHEIFYRDSGKEIYLIELPVKLVKHVPQSWQTMGATSKVKRYWSP 883
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K+L EL + + ++ R+ +F H++ W +++ A + IL
Sbjct: 884 EVKQLARELMEQRELHKMVCDTLRNRMYAKFDAHYSTWMKVINCIANIDCIL 935
>gi|346322336|gb|EGX91935.1| DNA mismatch repair protein msh6 [Cordyceps militaris CM01]
Length = 1207
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 209/710 (29%), Positives = 359/710 (50%), Gaps = 73/710 (10%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
E+ +E D+ + RD ++R PGD YDPRT+++PP N S +KQ+WE K
Sbjct: 278 EKAHTKEPDERYSWLSKIRDKEKREPGDPDYDPRTIFIPPLAWNNFSPFEKQYWEIKQNL 337
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKFYEL+E DA +G +E D + + G PE V + K Y+
Sbjct: 338 WDTIVFFKKGKFYELYENDATIGHQEFDFKMTDRVNMRMVGVPESVLDHWVNQFIAKQYK 397
Query: 401 VLVVEQTETPEQLELR-RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
V V+Q ET E+R R++K K DK++ R++ V+T GTL +G +L + A++ +A
Sbjct: 398 VARVDQMETNLGKEMRERQDKTGKKADKIISRQLACVLTAGTLVDGSMLQDDM-AAHCVA 456
Query: 458 LTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
+ ES + P FGI VD AT R L + +DD+D + ++++ P E++
Sbjct: 457 IKESVVDGLPV-------FGIAFVDTATGRFFLTEFVDDVDLTKFETFIAQIGPREMLLE 509
Query: 516 ANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSN 573
+ LS + R +L++ +P + L EFWDA+T E +TA +N
Sbjct: 510 KSHLSTKANR-VLKNNTSPTTIWTHLKHGVEFWDADTCRRE-------LTA-------AN 554
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
+++A+ DG E + ++SA+G ++YL+ ++ LL + F +
Sbjct: 555 YFSTEADSDGG------WPEALEKQRDNDVLMSAVGALVWYLRFLKVERPLLSQSNFSM- 607
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ + K +VLD L NLE+F NS +G S GTL+ LN C+T FGKRL R W+A
Sbjct: 608 ----YNPIQKNGTLVLDGQTLINLEIFSNSVNGGSDGTLFQLLNKCITPFGKRLFRQWVA 663
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSN 752
PL N I ER DAV L N P E F L ++PD+ERL++R+ A +
Sbjct: 664 HPLQNIDRINERLDAVDMLN--NDPSVREQFASQLVKMPDLERLISRIHACA-------- 713
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
+ ++F+ L G E ++ + + + + L ++ +P++
Sbjct: 714 ----------CKPEDFVRVLDGFEQIEYTMTLVSSF--KGGNGLLDRLIA---SMPSLEE 758
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
L ++++AFD +A + +IP G++ D+D++ ++++ I++ L + L E++ L ++
Sbjct: 759 PLAYWRNAFDRRKAKDEKILIPERGIEEDFDASLERMENIKSQLQELLTEKKGELKCKAL 818
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
+ +GK+++ +E P++++ VP + S+ K R++ + L+ EL +AE
Sbjct: 819 KFTDVGKEIFQIEAPKAIK--VPSSWRQMSATKDVKRWYFTELTSLVRELQEAEETHSQL 876
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
++ + R +F + W + A A L ++ SL A L SC
Sbjct: 877 VREVAARFCKKFDVDYELWLSAIQAIAQLDCLV---SLAKASSCLGEPSC 923
>gi|296418664|ref|XP_002838949.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634935|emb|CAZ83140.1| unnamed protein product [Tuber melanosporum]
Length = 1032
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 211/695 (30%), Positives = 327/695 (47%), Gaps = 85/695 (12%)
Query: 293 HFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
+F D +DA P YDPRTL++PP S +KQ+WE KS+ D V+FFK GK
Sbjct: 134 YFWLVDIKDADGNPPDHPDYDPRTLFVPPSAWLKFSPFEKQYWEIKSRLYDTVVFFKKGK 193
Query: 353 FYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYEL+E DA +G +E DL+ + G PE + M + KGY++ V+Q ET
Sbjct: 194 FYELYEDDATIGHREFDLKLTDRVNMRMVGVPESSLDMWAAQFIAKGYKIARVDQKETAL 253
Query: 412 QLELRRK--EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
E+R K + G ++K+++RE+ V+T GTL + +L + A+Y +A+ ES +
Sbjct: 254 GKEMREKCGKAGKEEKIIRRELACVLTGGTLVDESMLQ-DEMATYCVAIKES-----FRE 307
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
+ FGI VD AT L + DD D + L+++RP E+I LS ++ R +
Sbjct: 308 KEPSFGIAFVDTATGEFSLSEFEDDFDLTKFETFLAQIRPRELIIEKGFLSSQSTRLLKN 367
Query: 530 HTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
+T N + N L P EFW+ TTV E+ + ES +K P
Sbjct: 368 NTSLNTIWNKLKPGVEFWEGSTTVREL--VSKDYFGESASKDRKG-------------WP 412
Query: 589 GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV 648
L E+ +SALG L YL+ +D L
Sbjct: 413 QALEEV----KEKELAMSALGALLCYLQTLKIDREL------------------------ 444
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
L NLE+F NS G +GTL++ LN C+T FGKR+ + W+ PL +S I R DA
Sbjct: 445 ----TLLNLEIFANSSDGGPTGTLFSLLNRCITPFGKRMFKLWVCHPLADSDKINARLDA 500
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
V L N F F L+++PD+ERL++R+ A S + +F
Sbjct: 501 VESLNS-NNGFQDAFVTHLNKMPDLERLISRIHAGS------------------SRATDF 541
Query: 769 ISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANN 828
+ L G E + A + L + + +LT +P + LK ++ AFD +A +
Sbjct: 542 LRVLEGFEQIRDAIDEI--TLYSVGGGLIGQLLT---SMPDLKRSLKQWEAAFDREKAKS 596
Query: 829 SGRIIPHGGVDMDYDSACKKVKE-IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
G ++P GV++D+D++ +++ I L L E + L I Y GK++YL+EVP
Sbjct: 597 QGLLVPERGVELDFDTSQDVIEDIINVELESLLTEYKSSLKSRDIKYTDSGKEIYLIEVP 656
Query: 888 ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
++P+ + S + R+++P +KKL+ L +A+ +K + R +F
Sbjct: 657 VKFARNIPKSWTQMSGTQKVKRFYSPEVKKLVRSLQEAQETHSQIVKEVAGRFYERFDRD 716
Query: 948 HNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ W V A L +L SL + L SC
Sbjct: 717 YQTWLGAVKIVANLDCLL---SLARSSTSLGETSC 748
>gi|310796497|gb|EFQ31958.1| MutS domain V [Glomerella graminicola M1.001]
Length = 1229
Score = 293 bits (750), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 266/1006 (26%), Positives = 454/1006 (45%), Gaps = 131/1006 (13%)
Query: 18 QRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQSNP 77
Q+ I FFSKS + S S + SK + +S+P ++ +N P P P P++ +P+
Sbjct: 30 QKTIVQFFSKSANAS-SRSTSKPATSAPDSSPCLRESARTNTLPRP-PQPSSTTPV---- 83
Query: 78 KKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRVY----WPLDKAWYEGCVKSFDKECN 133
PS PA ++ E+++ ++V WP E + +
Sbjct: 84 ----------PSSDAIEPACSQ---ENMVTSAVKVATRDAWPSPSTQAETVISQITSQVT 130
Query: 134 KHLVQYDDGEDELLDLGKEKIEWVQESVSL----LKRLR------RDSFKKVVVEDDEEM 183
++ I + + S RLR R +V+D ++
Sbjct: 131 GFRPPLPSSSP--TRKSRKPISYAEPSDDEDDDPFVRLRASGTRRRTKTPAAIVDDGDDY 188
Query: 184 ENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRK--SSGVKKS 241
E+ E S+ D DD + V E + + ++ K + RK+ SS VK+
Sbjct: 189 EDAE---SNGPVDEDDDMLDFVVSDESDAPSQSKKRKRREQTKAAQPRKKPNVSSPVKEE 245
Query: 242 KSDGNAVN-ADFKSPIIKPVKIFGSDKLS---NGFDNPVMGDVSERFSAREADKFHFLGP 297
+ D + + A P + + D S G + + +K H P
Sbjct: 246 QYDDDDIEEAMLDIPNTSTAQQWRYDPTSVAQAGTRTASKPTARRHTTLKGKEKAHLKEP 305
Query: 298 DRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+ R D ++ PGD YDP T+Y+PP S +KQ+WE K K D V+FFK
Sbjct: 306 EDRYPWLANIIDINKKPPGDPDYDPTTVYIPPMAWNKFSPFEKQYWEIKQKLWDTVVFFK 365
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G + DL+ + G PE + M V + KGY+V V+Q E
Sbjct: 366 KGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQME 425
Query: 409 TPEQLELRRKEKGSK-----DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-- 461
+ E+R ++ S DK+++RE+ ++T GTL +G +L + A+Y ++ ES
Sbjct: 426 SALGKEMRERDDASAKNKKVDKIIRRELACILTGGTLVDGSMLQDDL-ATYCASIKESII 484
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ PA FGI VD AT + + + DD+D + ++++ P E+I + +S
Sbjct: 485 DDKPA-------FGITFVDCATGQFFISEFEDDVDLTKFETFVAQISPRELILEKSRIST 537
Query: 522 ETERAILRHTRNPLV--NDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R IL++ +P+ N L SEFWDA+TT E+ DS +
Sbjct: 538 KALR-ILKNNTSPMTIWNYLKSSSEFWDADTTRREL---------------DSGDYFATE 581
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
+G T E ++ ++SA G + YL+ L+ LL FE +
Sbjct: 582 DGRDET-----WPETLAQARDKDLLMSAFGSLVQYLRVLKLEGDLLSQGNFEW-----YT 631
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ + ++LD L NLEVF N+ +G GTL+ LN CVT FGKRL R W+ PL +
Sbjct: 632 PIQRNGTLILDGQTLINLEVFSNTVNGGPEGTLFTLLNRCVTPFGKRLFRQWVCHPLCDI 691
Query: 700 GLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
I ER DAV L RGV + +F ++++PD+ERL++R+ A+S
Sbjct: 692 KKINERLDAVDMLNSDRGVRE----QFTSQMTKMPDLERLISRIHAAS------------ 735
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+ ++F+ L G E ++ LG+ + + +L +P + L +
Sbjct: 736 ------CKPEDFVRVLEGFEQIEYTMGLLGSF--GGGNGLVDRLLA---SMPNLSEPLSY 784
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+K AFD +A + IP ++ D+D++ ++++I+ L + L +++ L + +
Sbjct: 785 WKTAFDRKKARDERIFIPERSIEQDFDNSQDRIEDIKQELQELLGKKQSELKCKKLKFTD 844
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
IGK++Y +E P++++ VP ++ S+ RY+ + +L+ +L +AE +K +
Sbjct: 845 IGKEIYQIEAPKAVK--VPSNWRQMSATSSVKRYYFEELTELVRQLQEAEETHSQIVKEV 902
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+R +F + W Q + + L ++ SL A L SC
Sbjct: 903 AERFFRRFDADYETWSQSIRIISQLDCLI---SLAKASSSLGEPSC 945
>gi|330800615|ref|XP_003288330.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
gi|325081628|gb|EGC35137.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
Length = 979
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 207/683 (30%), Positives = 340/683 (49%), Gaps = 78/683 (11%)
Query: 291 KFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
++ FL D +D + G YDPRTL +P L S ++Q+W+ KSK+ D V+FFK
Sbjct: 60 RYSFL-VDVKDGNGNKKGSPDYDPRTLQIPASCLTKFSPFERQFWDIKSKYYDTVVFFKK 118
Query: 351 GKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
GKFYEL+E DA +G + L L+ + G PE F+ KL GY+V V+Q ET
Sbjct: 119 GKFYELYENDADIGHQILHLKMTDRVNMRMVGVPESAFTHWASKLINLGYKVAKVDQMET 178
Query: 410 PEQLELRRKEKGS---KDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
+ R+ EKG KD +++RE+ +++T GTL + ++S + ++YLMA+ E S
Sbjct: 179 SIGMNKRQNEKGGRNKKDSIIQRELTSILTAGTLLDESMIS-DKTSTYLMAIKEDEYSNK 237
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+G+C VDV+ L + DD + LL ++ P E++ +S +T
Sbjct: 238 -------YGVCFVDVSIGEFFLCSIDDDENRMQFETLLLQMMPKEVVYEKGAISAKTMSI 290
Query: 527 ILR--HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ R T P++N + L E+WD +E+LN+ + +
Sbjct: 291 MKRVLATVKPVMNARLSL-EYWDP---------------SETLNRVNDSCGR-------- 326
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
+P L E+ + + ++ +LGG L YL + + +L +F+ G+
Sbjct: 327 --IPESLKEM----KNETLLICSLGGCLSYLSDIKIAQQVLEQGRFKRFNSLDVGNS--- 377
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
++LD L NLE+F NS G + GTL+ ++ CVT+FGKRL R W+ RPL N I +
Sbjct: 378 --LILDGQCLVNLEIFNNSTDGTTEGTLFKLMDRCVTSFGKRLFRQWICRPLANKERIVD 435
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
RQ A+ LR N + L+++PD+ER+LAR+ A S +
Sbjct: 436 RQRAIEHLRD-NPDHLQKVISILTKIPDLERMLARIRAGSS------------------K 476
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
+ + IS L+ E + +E+ E Q++ + G P ++ + K++F V
Sbjct: 477 IADLISVLNHFEAIHSKLEEFEKKMEDFEQEQINGNYS---GYPNLLRYITTIKESFK-V 532
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
E + +IIP G+ ++D KK+++IE SL +HL EQ+ +I + +GK++Y +
Sbjct: 533 EQD---KIIPSKGLFKEFDECQKKIQQIEQSLEEHLTEQKTYFSCRNIEFKHMGKEIYQI 589
Query: 885 EVPESL--RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
EVP S R +P++Y+L+S K RY TP I + L L + E E K + +++
Sbjct: 590 EVPVSALNRAKLPKNYQLKSKTKAACRYHTPFIIETLPSLLEERDELEVLSKEVSKKIQA 649
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
F + N + + V A L +L
Sbjct: 650 NFSVYFNHFSKAVQRLAQLDCLL 672
>gi|384495958|gb|EIE86449.1| hypothetical protein RO3G_11160 [Rhizopus delemar RA 99-880]
Length = 964
Score = 291 bits (746), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 207/696 (29%), Positives = 344/696 (49%), Gaps = 63/696 (9%)
Query: 279 DVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFK 338
D +++F + ++ +L D +DA + YDPRTL++P + +KQ+WE K
Sbjct: 138 DRNQKFKEKNESRYQWL-QDIKDADKNPVDSPDYDPRTLFIPSSAWSLFTPFEKQYWEVK 196
Query: 339 SKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARK 397
KH D V+FFK GKFYEL+E DA +G ++ DL+ + G PE +F + K
Sbjct: 197 CKHWDTVVFFKKGKFYELYEKDADIGHRDFDLKLTDRVNMRMVGVPEMSFDYWAAQFIAK 256
Query: 398 GYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
GY+V+ V+Q ET +R K S KDK+++RE+ +V+T GTL + LL+ N +++ M
Sbjct: 257 GYKVVKVDQMETAIGKSMREKSGASAKDKIIRREVTSVLTAGTLVDAGLLT-NDLSTFCM 315
Query: 457 ALTE--SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
++ E +N+ + FGIC VD AT+ L DD++ + L LL +++P E++
Sbjct: 316 SIKELCTNEEIPPK-----FGICFVDTATAEFNLVHFEDDINRTKLGTLLMQIKPRELVT 370
Query: 515 PANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
L+ T + I PL N ++P EFWD +TT EIK N + + N
Sbjct: 371 EKGRLTKSTIQMIKSTLNEPLWNMVLPEREFWDDQTTEDEIK--MNEYFGSDMTDNEQNS 428
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+QA + EL + ++SA GG ++YL+ LD+ LL AK ++
Sbjct: 429 GFNQA-----------MQELY----ADPMLMSAFGGMIWYLRSLKLDKELLS-AKHIVM- 471
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ + + +VLD L NLE+F+NS G GT++ L + +T FGKRL + WL
Sbjct: 472 ---YDPIRQGTSLVLDGQTLANLEIFQNSYDGGIEGTVFKLLANSITPFGKRLFKRWLCH 528
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL I +R DAV L + + K L+ LPD+ERL++R+
Sbjct: 529 PLRQPKDINDRLDAVEDLMKLWDLHS-SVAKQLASLPDLERLMSRIH------------- 574
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG-KGLPAIVSI 813
+ + +++EF+ AL G + + + IL+ ++S+ ++++ P I I
Sbjct: 575 -----SGRIKVKEFLLALEGFRMTENVIN----ILKESQSQLKSNLISQMIDQFPNIDPI 625
Query: 814 LKHFKDAFDWVEANNSGR----IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
L F + + + +IP G + +D ++ ++ HL +K L
Sbjct: 626 LDDLNSLFITADVDMDYQKVKAMIPKSGKNEAWDDIMNQIDAVQNQFQSHLNSLKKQLKC 685
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
SI Y +GKD+Y +EVP+ + SVPRD+ S+ RYW +K L+ E + K
Sbjct: 686 PSILYRDLGKDIYQIEVPKGV--SVPRDWIQMSTTSKLNRYWDSTVKNLVSEYKELLETK 743
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K+ +++ F + + W +V A L ++
Sbjct: 744 NEFVKTFSKQVYQHFDQSYPIWLSVVNTIAQLDALM 779
>gi|367048143|ref|XP_003654451.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
gi|347001714|gb|AEO68115.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
Length = 1231
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 200/672 (29%), Positives = 335/672 (49%), Gaps = 67/672 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D + PG +DP ++Y+PP R S +KQ+W+ K D ++FFK GKFYEL+E D
Sbjct: 317 DGNKNPPGHPDFDPTSIYIPPSAERGFSAFEKQYWDIKKNLWDTIVFFKKGKFYELYEND 376
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + M V + KG++V V+Q E+ E+R +E
Sbjct: 377 ATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQMESALGKEMRERE 436
Query: 420 KGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFG 475
K +K+++RE+ ++T GTL +G +L + A+Y A+ ES ++ PA FG
Sbjct: 437 SNDKKAEKIIRRELTCILTGGTLVDGAMLQDDM-ATYCAAIKESVVDEKPA-------FG 488
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP- 534
I VD AT + L + DD+D + +++ P E++ + LS + R IL++ P
Sbjct: 489 IAFVDAATGQFFLSEFEDDVDLTKFETFVAQTSPRELVLEKSRLSSKALR-ILKNNTGPT 547
Query: 535 -LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
+ N L P +EFWDA+ E+ D + + EG + P L E
Sbjct: 548 TIWNYLKPGTEFWDADLARREL---------------DCSGYFTSEEGQEVV-WPKKLGE 591
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+SALGG YL+ LD++LL FE + + + ++LD +
Sbjct: 592 ----AREKDLAMSALGGLTHYLRILKLDQSLLSQGNFE-----SYNPIHRNGTLILDGQS 642
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
L NLEVF N+ +G GTL++ LN C+T FGKRL R W+ PL N I ER DAV L
Sbjct: 643 LINLEVFANTVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNIQKINERLDAVDMLI 702
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
++ +F ++++PD+ERL++R+ A + + ++F+ L
Sbjct: 703 A-DRSILQQFSSQMAKMPDLERLISRIHAGA------------------CRPEDFVRVLE 743
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
G E +D + LGA + + ++ +P + L +++ AFD +A +S +I
Sbjct: 744 GFEQIDYTMALLGAF--GGGNGLVDRLIA---SMPNLKEPLGYWETAFDRRKARDSKLLI 798
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
P GV+ D+D + ++ I+ L L+ Q+ L ++ + +GK++Y +EVP+S++
Sbjct: 799 PERGVEEDFDRSQDELARIKDELHALLERQKTALKCKTLKFTDVGKEIYQIEVPKSVK-- 856
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S+ RY+ ++ L+ EL +AE +K + R +F + W Q
Sbjct: 857 VPASWRQMSATSAVKRYYFRELEDLVRELQEAEETHSQIVKEVASRFFRRFDMDYEVWLQ 916
Query: 954 MVAATAGLTLIL 965
+ A L ++
Sbjct: 917 AIRIIAQLDCLI 928
>gi|340502546|gb|EGR29225.1| hypothetical protein IMG5_160240 [Ichthyophthirius multifiliis]
Length = 1077
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 224/784 (28%), Positives = 386/784 (49%), Gaps = 83/784 (10%)
Query: 221 DEQENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDV 280
+EQEN+ + ++SS +KSK +P FG K++N +N
Sbjct: 131 NEQENEDFDEKYKQSSTARKSKQS-------LSTPK------FGQ-KVTNTSENICEDPK 176
Query: 281 SERFSA-READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
F R+ L + RD + R+ YDP TLY+PPD + L+ +Q+W KS
Sbjct: 177 KAAFEQLRDTTPLWALPENARDKQMRKKDHPNYDPTTLYIPPDDFKKLTICMQQYWTIKS 236
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
++ DK++ FK+GKFYELF DA + KELDL +M G++ H GFPE+ KL +GY
Sbjct: 237 ENFDKIVLFKLGKFYELFYEDALISNKELDLNWM-GDKMHTGFPEKALDRMASKLVERGY 295
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
+V + EQTET +++E R K K + K ++RE+ V+TKGT + N D YL+ L
Sbjct: 296 KVAIAEQTETNQEMEKRLKNKIGQ-KCIQRELVQVMTKGTYDINQ--EGNYDPRYLVCL- 351
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
++ F +C+++ T++I + + DDL + LL +++P E++ ++
Sbjct: 352 --------KNFKNYFCLCILEHTTNQITISFIQDDLHYTNFKTLLCQIKPQEVVFDPLLV 403
Query: 520 SPETERAILRHTRNPLVNDLVP-LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+ E ++ IL+ LVP LS F + +N +N+ S + Q
Sbjct: 404 NNEVKK-ILKSGY------LVPQLSPFPNK-------RNEWNKNACFSYFE--------Q 441
Query: 579 AEGDGLTCLPGILSELIST-GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
G P +L +L++ + +L L G YLK + + +L A++++
Sbjct: 442 VYGQDKQLYPQVLQDLVNIRNEKNDIILETLSGLFSYLKSLLIFDEILYTARYQMQEDIH 501
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSS-----GTLYAQLNHCVTAFGKRLLRTWL 692
+ + +M+LD+ AL++LE+ E S S+ G+L + +N + FG R+L+ W+
Sbjct: 502 SQNSVLQQFMILDSQALQHLEILEPSAGFFSTKQAFDGSLLSYINKTRSPFGYRMLKKWV 561
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL + +I +R +A+ L+ +++ F+K L ++PD+E++ R++ + +
Sbjct: 562 CAPLLDIQMINDRLNAIEDLQNISE-MRDYFQKELQKMPDLEKICGRIYKYQIKQAQKN- 619
Query: 753 KVVLYEDAAKKQLQEFISALHGCE-LMDQACSSLGAILENTESRQLHHIL---TPGKGLP 808
VV YED + +L+EF L + + SS EN S++L I + G LP
Sbjct: 620 -VVQYEDFSTIRLKEFRELLSNFQSSYNLIMSSFSQYAENFNSQRLKQITLISSQGGKLP 678
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
I ++ F + +W S + P G+ ++D A + VK+I+ L +L++ +K+
Sbjct: 679 EIAQLIAQFDNIIEW----KSNKPYPKKGLLQEFDEAQENVKQIQQELENYLRKIQKMFS 734
Query: 869 DTSITYVTIGKDLYLLEVPES-LRGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
D SI Y Y LE+ E+ ++G+ P D+E S K + R+ T +KKL+ EL A+
Sbjct: 735 DNSIKY----SPKYELEIHENHVKGNKKPSDFEFTSKTKQYQRFLTNPLKKLIYELENAQ 790
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL---------TLILLDGSLLHAFLIL 977
++ LK+I ++ QF + H W + A L + L DG + +I
Sbjct: 791 EIEKKELKTICVQIFSQFYQMHKTWDSFLHILAELDCLCSLSLVSFTLADGIMARPQIIK 850
Query: 978 QSNS 981
NS
Sbjct: 851 NQNS 854
>gi|448508881|ref|XP_003866016.1| Msh6 protein [Candida orthopsilosis Co 90-125]
gi|380350354|emb|CCG20576.1| Msh6 protein [Candida orthopsilosis Co 90-125]
Length = 1242
Score = 288 bits (738), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 206/694 (29%), Positives = 343/694 (49%), Gaps = 70/694 (10%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L + +DA++R P D YDPRTLY+P + +KQ+WE KSK +
Sbjct: 298 FAKENEERYQWL-VNIKDAEKRTPDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKSKMWN 356
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 357 TVVFFKKGKFYELYENDAVIANTQFDLKIAGGGRANMKLAGIPEMSFEHWAKEFISHGYK 416
Query: 401 VLVVEQTETPEQLELRRKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V V+Q E+ E+R GSK +K++KRE+ V+T GTLT ++++ + ++Y +++
Sbjct: 417 VAKVDQKESMLAKEMRG--GGSKEEKIIKRELTGVLTGGTLTNLDMITDDM-STYCLSIK 473
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANM 518
E S + FG+ VD ATS + L ++ DD +C+ L L+++++P EII + N+
Sbjct: 474 EDTAEDGS----KIFGVAFVDTATSELNLIELHDDAECTKLDTLITQVKPKEIICEKGNL 529
Query: 519 LSPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNV 574
+ T+ IL+ H+ N + N L P++EFWD + V + +K+ Y AE L
Sbjct: 530 CNIATQ--ILKFCAHSNNQIWNSLNPITEFWDYDIAVEQLVKSKY--YDAEDL------- 578
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
D + P + L+ + +A GG L YLK LDE+++ +
Sbjct: 579 -------DDFSKYPEV---LVDIKKNHLVAFNAFGGLLSYLKTLKLDESIMSLGNIKQYK 628
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
S + +M+LD L NLE+ N+ G GTL +N T FGKR L+ W+
Sbjct: 629 ISE----NETSHMILDGITLGNLEILNNNYDGGDQGTLLKLVNRATTPFGKRHLKKWILH 684
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL I R D++ L + L+ LPD+ERL+AR+ + R+ +V
Sbjct: 685 PLMRIDEINLRYDSIDYLMDEGSELRSILQDCLTSLPDLERLIARVHGGT-LRFRDFLRV 743
Query: 755 V-LYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIV 811
+ +E A+ KQL EF + C L L++ + HI
Sbjct: 744 IESFESIARFSKQLLEFANV---------DCGVLYKYLQSFPQDMVEHI----------- 783
Query: 812 SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
++DAF+ +A S IIP GVD ++D + + ++E L + LK +K
Sbjct: 784 ---SEWEDAFERQQA-LSDVIIPAKGVDAEFDESQAVIDDLENQLNELLKGYKKEFKSHE 839
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
I Y GK++YL+E+P L VP+ ++ + R+W+P +K L +L + +
Sbjct: 840 ILYRDSGKEIYLIELPVKLVKHVPQSWQTMGATSKVKRFWSPEVKHLARKLMEQRESHKM 899
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++ R+ +F H+ W +++ A + IL
Sbjct: 900 VCDTLKNRMYAKFDAHYTTWMKVINCIANIDSIL 933
>gi|302678711|ref|XP_003029038.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
gi|300102727|gb|EFI94135.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
Length = 1206
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 211/712 (29%), Positives = 348/712 (48%), Gaps = 67/712 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D + FL D RD +RPG+ YDPRT+Y+P + + + ++Q+WE K H D V+FF+
Sbjct: 250 DPYSFL-QDIRDKDGKRPGEKGYDPRTIYIPKNAWKEFTPFERQFWEIKQNHYDTVLFFQ 308
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G +E DL+ + + G PE +F K KGY+V V+Q+E
Sbjct: 309 KGKFYELYEDDARIGHQEFDLKITSRVKMSMVGVPEMSFDFWAAKFLGKGYKVGRVDQSE 368
Query: 409 TPEQLELR----------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
T E+R E +KDK+V+RE+ V T GTL + E+L+ + A + +A+
Sbjct: 369 TALGAEMRLAADKKGKAKSSEDKAKDKIVQRELNKVYTNGTLVDPEMLT-DEQAGHCVAI 427
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
E N QST FGICV+D ATS+ + DD+ + L ++ +LRP EI
Sbjct: 428 IEDNDR-GDQST---FGICVLDCATSQFNMSHFTDDVCHTKLETMMRQLRPKEI------ 477
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
L ++ L T L+ +++P W T + +++ T E L K + ++
Sbjct: 478 LVKKSGPGALSVTSTRLLKNILPSQCTW---TNLRDVEGFTYPDTIEELRKLYPDQDDAM 534
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
+G LP + + I Q + ALG ++YL++ +D+ +L F + +
Sbjct: 535 DDG----GLPETVPQSIRDVAHSQQAMEALGSMIWYLRQLNIDKDILSMKNFNV-----Y 585
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
M + +VLD L +LEV N+ G G+L L+ C+T FGKRL R WL PL
Sbjct: 586 DPMKRGEGLVLDGQTLAHLEVLMNNE-GTDEGSLLKLLSRCITPFGKRLFRIWLCMPLRE 644
Query: 699 SGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY 757
I +R DAV + +N P F +F LPD+ER++AR+ A S
Sbjct: 645 ISSIDDRLDAVEDI--LNHPSFESQFADVAKGLPDLERIVARIHAKS------------- 689
Query: 758 EDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHF 817
++++F+ L + + + ++L ES+ + +L +G P +V +K
Sbjct: 690 -----CKIKDFLKVLSSFKKLSRGMNALADTAAEFESKTISGLL---RGAPDVVPNIKQI 741
Query: 818 KDAFDW-VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL-GDTSITYV 875
++ F+ + ++P G D YD ++K +E SL + LK+ ++ GD S +
Sbjct: 742 EEMFERPASEKEAEELVPMEGKDAVYDEVIAEIKALEKSLNRQLKKYEDVVGGDLSYWHS 801
Query: 876 TIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
G KD+YL+E S + ++PRD+ K RY P ++ + +L +A +++A+
Sbjct: 802 ATGNKDIYLVETKASQK-NIPRDWTKHGGTKAKTRYVVPALQPEIRKLKEARENRKTAIA 860
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ RL +F W +++ A L + SL + + SC E
Sbjct: 861 TFKSRLYAEFDVDRPLWLKIIRVFAELDCLF---SLAKSSAAIGEPSCRPEF 909
>gi|19075844|ref|NP_588344.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|39931686|sp|O74502.1|MSH6_SCHPO RecName: Full=DNA mismatch repair protein msh6
gi|6644186|gb|AAF20943.1|AF207839_1 mismatch repair protein Msh6 [Schizosaccharomyces pombe]
gi|3581916|emb|CAA20855.1| MutS protein homolog [Schizosaccharomyces pombe]
Length = 1254
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 243/831 (29%), Positives = 398/831 (47%), Gaps = 81/831 (9%)
Query: 169 RDSFKKVVVEDDEEMENVE-DEISDDRSDSSDDDWNKNVGKEDV-SEDEEVDLVDEQENK 226
+ S K +V DDE + VE D IS+ S++S + ++V S DE+VD +
Sbjct: 217 KGSRHKRIVSDDESDDYVEPDHISEASSEAS-------LPIDEVESMDEDVDGYSDHSVS 269
Query: 227 VLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPV-KIFGSDKLSNGFDNPVMGDVSERFS 285
V +K S +K S+ + S I P + GS + N V+ +R
Sbjct: 270 VAAPIPKKES--RKESSNSLYESYRLGSQIASPSPSVSGSASPTKSNKNGVLNREEKRRQ 327
Query: 286 AREA------DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
EA +++ +L D RDA + R GD YDPRTLY+PP +KQ+W+ K
Sbjct: 328 RMEAFKKENNERYEWL-LDVRDADQNRVGDPNYDPRTLYIPPSAWATFKPFEKQFWKIKK 386
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
MD V+FF+ GKFYEL+E DA +G + L+ + G PE +F + KG
Sbjct: 387 DLMDTVVFFQKGKFYELYENDAAIGHQVFSLKLTDRVNMKMVGIPEASFDYWASQFIAKG 446
Query: 399 YRVLVVEQTETPEQLELRRKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
YR+ V+Q ET E++ +++ K +KVV+R + V+T GTL + +L+++ ++Y MA
Sbjct: 447 YRIARVDQLETALGKEIKDRQRTQKEEKVVQRGLTQVLTSGTLVDEAMLTSDL-STYCMA 505
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ ES QS + + FGIC +D +T + + DD+ + L LL+++RP E+I +
Sbjct: 506 IKESLQSDNEEPS---FGICFIDTSTGGFHMCEFTDDIHRTKLDTLLTQVRPKELILEKS 562
Query: 518 MLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+S ++ RAI + + + N + P +EFWD E EI I +
Sbjct: 563 KISQKSIRAIKYCVSSSSIWNFIKPYTEFWDNERVEREI------IAGDYFK-------- 608
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+GL P IL +S +SA G +YL++ LD+ + F+ S
Sbjct: 609 -----NGLEGAPKILKSYLS---EKPLAISAFGALFWYLRQLKLDKDMCSMGNFDEYDAS 660
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ ++++ L+NLE+F NS G S GTL+ L CVT FGKRL TWL PL
Sbjct: 661 -----QQSTSLLMNGQTLKNLEIFSNSFDGGSEGTLFHLLCRCVTPFGKRLFHTWLCHPL 715
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I R D V L N L +LPD+ERL++R+ A GR+
Sbjct: 716 RSGTAINARLDVVE-LIADNPVIRDTIWGFLHKLPDLERLISRVHA-----GRS------ 763
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSL-GAILENTESRQLHHILTPGKGLPAIVSILK 815
+ +F+ L G + ++ A L +E E L I+ + P + L+
Sbjct: 764 -------KPADFVRVLEGFQRINSAFDQLREEFMEVAEGTLLGEII---QSAPNMKEELE 813
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ AF+W +A+ G P G + +YD++ K E++ L L++ +K L +S+ +
Sbjct: 814 AWTRAFNWQKASEEGVFEPEIGFEAEYDTSQKYQSELKNELYALLEQYKKQLRCSSLNFK 873
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
IGK++Y +EVP ++ VP ++ S K RY+ ++K + +L +AE + +
Sbjct: 874 NIGKEVYQVEVPSDVK--VPVNWCKMSGTKKTNRYYNDELRKKIKKLLEAEELHLAIMSR 931
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ ++ +F ++ +W ++ TA + SL A L C E+
Sbjct: 932 MQEKFYIRFDSNYEQWLALIKYTASIDCFF---SLSQAAAALGEPYCRPEI 979
>gi|402086031|gb|EJT80929.1| DNA mismatch repair protein msh6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1236
Score = 287 bits (735), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 205/690 (29%), Positives = 330/690 (47%), Gaps = 87/690 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD +P D ++P T+Y+PP +N S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 308 RDMDGNKPEDAEFNPATIYIPPSAWKNFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYEN 367
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + M V + KGY+V V+Q E+ E+R +
Sbjct: 368 DATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVARVDQMESALGKEMRER 427
Query: 419 E---------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPAS 467
+ DK+++RE+ ++T GTL EG +L + A+Y +A+ ES N +PA
Sbjct: 428 DDPGAKKAKGAAKADKIIRRELACILTGGTLVEGSMLQDDM-ATYCVAIKESTLNGNPA- 485
Query: 468 QSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI 527
FGI VD AT + L Q DD+D + L +++ P E++ LS + R I
Sbjct: 486 ------FGIAFVDAATGQFFLSQFEDDVDLTRLETFVAQTCPRELLLEKARLSTKALR-I 538
Query: 528 LRHTRNP--LVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVANSQAEGDG 583
L++ P + N L P +EF + + V L+ +++ AD A
Sbjct: 539 LKNNTTPTTIWNYLKPGAEFPEPDAAVRDLDSSGYFSKAAEGEAGDADQEEA-------- 590
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
E + S ++SA+G + YL+ L+ +LL FE + + +
Sbjct: 591 -------WPEALEKSRDKSLLISAVGALVHYLRVLKLERSLLSQGSFEW-----YSPIHR 638
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
++LD +L NLE+F NS +G GTL++ LN C+T FGKRL R W+ PL N+ I
Sbjct: 639 NGTLILDGQSLINLEIFSNSVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNTQKIN 698
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
ER DAV L ++ +F +S++PD+ERL++R+ A V ED
Sbjct: 699 ERLDAVDML-NADRSIREQFSSLMSKMPDLERLISRIHAG----------VCKAED---- 743
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL--------PAIVSILK 815
F+ L G E +D A S L A G GL P + L
Sbjct: 744 ----FVRVLEGFEQIDYAMSMLSA-------------FGGGNGLVDRLIGSMPDLKEPLG 786
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+K AFD + + ++P G++ D+D + + I+ L L Q+ L ++ +
Sbjct: 787 FWKGAFDRKKVRDQKLLVPEKGIEEDFDESAANIARIKRELHALLDRQKAALKCKTLKFT 846
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
+GK++Y +E P++ + VP+D+ S+ RY+ + +L+ EL +AE +K
Sbjct: 847 DVGKEIYQVEAPKATK--VPKDWRQMSATSSVKRYYFGELDELVRELQEAEETHSQIVKD 904
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ R +F + W Q + + L ++
Sbjct: 905 VAARFFKRFDVDYEVWIQAIRIISQLDCLI 934
>gi|402086030|gb|EJT80928.1| DNA mismatch repair protein msh6, variant [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1235
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 205/690 (29%), Positives = 330/690 (47%), Gaps = 87/690 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD +P D ++P T+Y+PP +N S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 307 RDMDGNKPEDAEFNPATIYIPPSAWKNFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYEN 366
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA +G + DL+ + G PE + M V + KGY+V V+Q E+ E+R +
Sbjct: 367 DATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFVAKGYKVARVDQMESALGKEMRER 426
Query: 419 E---------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPAS 467
+ DK+++RE+ ++T GTL EG +L + A+Y +A+ ES N +PA
Sbjct: 427 DDPGAKKAKGAAKADKIIRRELACILTGGTLVEGSMLQDDM-ATYCVAIKESTLNGNPA- 484
Query: 468 QSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI 527
FGI VD AT + L Q DD+D + L +++ P E++ LS + R I
Sbjct: 485 ------FGIAFVDAATGQFFLSQFEDDVDLTRLETFVAQTCPRELLLEKARLSTKALR-I 537
Query: 528 LRHTRNP--LVNDLVPLSEFWDAETTV--LEIKNIYNRITAESLNKADSNVANSQAEGDG 583
L++ P + N L P +EF + + V L+ +++ AD A
Sbjct: 538 LKNNTTPTTIWNYLKPGAEFPEPDAAVRDLDSSGYFSKAAEGEAGDADQEEA-------- 589
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
E + S ++SA+G + YL+ L+ +LL FE + + +
Sbjct: 590 -------WPEALEKSRDKSLLISAVGALVHYLRVLKLERSLLSQGSFEW-----YSPIHR 637
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
++LD +L NLE+F NS +G GTL++ LN C+T FGKRL R W+ PL N+ I
Sbjct: 638 NGTLILDGQSLINLEIFSNSVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNTQKIN 697
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
ER DAV L ++ +F +S++PD+ERL++R+ A V ED
Sbjct: 698 ERLDAVDML-NADRSIREQFSSLMSKMPDLERLISRIHAG----------VCKAED---- 742
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL--------PAIVSILK 815
F+ L G E +D A S L A G GL P + L
Sbjct: 743 ----FVRVLEGFEQIDYAMSMLSA-------------FGGGNGLVDRLIGSMPDLKEPLG 785
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+K AFD + + ++P G++ D+D + + I+ L L Q+ L ++ +
Sbjct: 786 FWKGAFDRKKVRDQKLLVPEKGIEEDFDESAANIARIKRELHALLDRQKAALKCKTLKFT 845
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
+GK++Y +E P++ + VP+D+ S+ RY+ + +L+ EL +AE +K
Sbjct: 846 DVGKEIYQVEAPKATK--VPKDWRQMSATSSVKRYYFGELDELVRELQEAEETHSQIVKD 903
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ R +F + W Q + + L ++
Sbjct: 904 VAARFFKRFDVDYEVWIQAIRIISQLDCLI 933
>gi|164423588|ref|XP_959678.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
gi|157070157|gb|EAA30442.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
Length = 1237
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 201/688 (29%), Positives = 335/688 (48%), Gaps = 71/688 (10%)
Query: 287 READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
RE ++ + D +DA R RPG YDP ++Y+PP R S + Q+WE K D V+
Sbjct: 310 REPEERYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVV 369
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
FFK GKFYEL+E DA +G + DL+ + G PE + M V + KGY+V V+
Sbjct: 370 FFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVD 429
Query: 406 QTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-- 461
Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + +A Y A+ ES
Sbjct: 430 QMESALGKEMRERDTKAKKADKIIRRELTCILTGGTLVDGSMLQ-DDNAVYCAAIKESVV 488
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ PA FGI VD AT + + + DD+D + +++ P E+I + LS
Sbjct: 489 DDKPA-------FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLST 541
Query: 522 ETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R IL++ +P + N L P +EFWDA+ E+ ++ E +
Sbjct: 542 KALR-ILKNNTSPTTIWNYLKPGTEFWDADVARRELDCSGYFVSGEGQEEV--------- 591
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
P L E ++SALG YL+ L+ LL F + +
Sbjct: 592 -------WPAKLKE----ARDKDLLMSALGALTQYLRMLKLERNLLSQGNF-----AWYN 635
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ + ++LD +L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ PL N
Sbjct: 636 PIHRNGTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNI 695
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+ ER DAV L + +F +S++PD+ERL++R+ A +
Sbjct: 696 QKLNERLDAVDMLND-DHSLREQFSSQMSKMPDLERLISRIHAGA--------------- 739
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG--KGLPAIVSILKHF 817
+ ++F+ L G E +D+ +E ES + L +P + L ++
Sbjct: 740 ---CRPEDFVKVLEGFEQIDRT-------MELLESYGGGNGLVDRLIASMPDLKEPLGYW 789
Query: 818 KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTI 877
K AFD A + +IP G++ D+D + ++ I+ L + L+ Q+ L + + +
Sbjct: 790 KTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKTAKFTDV 849
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
GK++Y +EVP++++ VP + S+ RY+ ++ L+ EL +AE +K +
Sbjct: 850 GKEVYQIEVPKTVK--VPPKWRQMSATSAVKRYYFKELEDLVRELQEAEETHSQIVKEVA 907
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R +F + W Q + + L ++
Sbjct: 908 SRFFKRFDLDYETWLQAIRIISQLDCLI 935
>gi|350287714|gb|EGZ68950.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2509]
Length = 1243
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 206/705 (29%), Positives = 339/705 (48%), Gaps = 74/705 (10%)
Query: 287 READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
RE ++ + D +DA R RPG YDP ++Y+PP R S + Q+WE K D V+
Sbjct: 316 REPEERYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVV 375
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
FFK GKFYEL+E DA +G + DL+ + G PE + M V + KGY+V V+
Sbjct: 376 FFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVD 435
Query: 406 QTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-- 461
Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + +A Y A+ ES
Sbjct: 436 QMESALGKEMRERDTKAKKADKIIRRELTCILTGGTLVDGSMLQ-DDNAVYCAAIKESVV 494
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ PA FGI VD AT + + + DD+D + +++ P E+I + LS
Sbjct: 495 DDKPA-------FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLST 547
Query: 522 ETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R IL++ +P + N L P +EFWDA+ E ++ E +
Sbjct: 548 KALR-ILKNNTSPTTIWNYLKPGTEFWDADVARREFDCSGYFVSGEGQEEV--------- 597
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
P L E ++SALG YL+ L+ LL F + +
Sbjct: 598 -------WPAKLKE----ARDKDLLMSALGALTQYLRMLKLERNLLSQGNF-----AWYN 641
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ + ++LD +L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ PL N
Sbjct: 642 PIHRNGTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNI 701
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+ ER DAV L + +F +S++PD+ERL++R+ A +
Sbjct: 702 QKLNERLDAVDMLND-DHSLREQFSSQMSKMPDLERLISRIHAGA--------------- 745
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG--KGLPAIVSILKHF 817
+ ++F+ L G E +D+ +E ES + L +P + L ++
Sbjct: 746 ---CRPEDFVKVLEGFEQIDRT-------MELLESYGGGNGLVDRLIASMPDLKEPLGYW 795
Query: 818 KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTI 877
K AFD A + +IP G++ D+D + ++ I+ L + L+ Q+ L + + +
Sbjct: 796 KTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKTAKFTDV 855
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
GK++Y +EVP++++ VP + S+ RY+ ++ L+ EL +AE +K +
Sbjct: 856 GKEVYQIEVPKTVK--VPPKWRQMSATSAVKRYYFKELQDLVRELQEAEETHSQIVKEVA 913
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
R +F + W Q + + L ++ SL A L C
Sbjct: 914 SRFFKRFDLDYETWLQAIRIISQLDCLI---SLAKASAALGQPCC 955
>gi|345571284|gb|EGX54098.1| hypothetical protein AOL_s00004g131 [Arthrobotrys oligospora ATCC
24927]
Length = 1266
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 215/690 (31%), Positives = 333/690 (48%), Gaps = 68/690 (9%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D +D RPGD +DPRTL++P S +KQ+WE K D V+FFK GKFYEL+
Sbjct: 353 DIQDKDGNRPGDEEHDPRTLFIPKYAWNKFSPFEKQYWEIKQDLFDTVVFFKKGKFYELY 412
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G +E DL+ + G PE + M + KGY++ V+Q ET E+R
Sbjct: 413 ENDATIGHQEFDLKLTDRVNMRMVGVPESSLDMWASQFIAKGYKIARVDQKETALGKEMR 472
Query: 417 RKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCF 474
+ K DK+++RE+ V+T GTL + +L N A+Y +A+ ES Q +
Sbjct: 473 ENDSKKKDADKIIRRELECVLTGGTLVDETMLQ-NEMATYCVAIKESVQDGIPS-----Y 526
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP 534
GIC VD AT L DD+D + L++++RP E++ LS + R IL+ P
Sbjct: 527 GICFVDTATGCFSLAGFEDDVDATKFETLVAQIRPKELVLEKGCLSTKALR-ILKTNTGP 585
Query: 535 --LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
+ +L EFWD E T+ E+ A+S E DG P
Sbjct: 586 KTIWTNLKSEREFWDDEHTIRELD------------------ASSYFEKDGAVSWP---- 623
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
E + VLSA GG L+YL++ +D L+ A F+ + + K +V+D
Sbjct: 624 EALEKSRDKPLVLSAFGGLLWYLRQLKIDADLVSLANFQW-----YDPIRKSTSLVMDGQ 678
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L+NLE+F NS G ++GTL+ LN C+T FGKR R WL PL ++ I R DAV +
Sbjct: 679 TLQNLEIFSNSFDGGAAGTLFNLLNQCITPFGKRTFRQWLCHPLSDAQKINARLDAVEAI 738
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ F L+RLPD+ER+++R+ A S + +F+ +
Sbjct: 739 MA-DSALLDAFTTQLNRLPDLERMISRIHAGS------------------CKPADFLRVI 779
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
G E ++ S + A + I + +P + +L+ + AF+ EA + G++
Sbjct: 780 EGFEQINVTMSEIKAYGGGGDGVIGELI----ESMPDLDGLLEPWNTAFNRKEAKD-GKL 834
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
IP GV+ D+D + V +IE L L + L +S+ + GK++YL+EV ++
Sbjct: 835 IPEHGVEQDFDDSQDNVDQIEKDLQDLLVSYKSKLKSSSLRFCDSGKEIYLVEV--PVKV 892
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
VP ++ S+ K RY++P K + EL +A K +L R +F + + W
Sbjct: 893 KVPDNWMQMSATKQVKRYYSPEGKAKVRELQEARERHAQIEKELLGRFCTRFDDQYTDWF 952
Query: 953 QMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ V + L ++ SL A L SC
Sbjct: 953 KAVKVISQLDCLI---SLTKASQGLGEPSC 979
>gi|336467632|gb|EGO55796.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2508]
Length = 1235
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 206/705 (29%), Positives = 339/705 (48%), Gaps = 74/705 (10%)
Query: 287 READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
RE ++ + D +DA R RPG YDP ++Y+PP R S + Q+WE K D V+
Sbjct: 308 REPEERYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVV 367
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
FFK GKFYEL+E DA +G + DL+ + G PE + M V + KGY+V V+
Sbjct: 368 FFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVD 427
Query: 406 QTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-- 461
Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + +A Y A+ ES
Sbjct: 428 QMESALGKEMRERDTKAKKADKIIRRELTCILTGGTLVDGSMLQ-DDNAVYCAAIKESVV 486
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+ PA FGI VD AT + + + DD+D + +++ P E+I + LS
Sbjct: 487 DDKPA-------FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRELILEKSHLST 539
Query: 522 ETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R IL++ +P + N L P +EFWDA+ E ++ E +
Sbjct: 540 KALR-ILKNNTSPTTIWNYLKPGTEFWDADVARREFDCSGYFVSGEGQEEV--------- 589
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
P L E ++SALG YL+ L+ LL F + +
Sbjct: 590 -------WPAKLKE----ARDKDLLMSALGALTQYLRMLKLERNLLSQGNF-----AWYN 633
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ + ++LD +L NLE+F N+ +G GTL+ LN C+T FGKRL R W+ PL N
Sbjct: 634 PIHRNGTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNI 693
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+ ER DAV L + +F +S++PD+ERL++R+ A +
Sbjct: 694 QKLNERLDAVDMLND-DHSLREQFSSQMSKMPDLERLISRIHAGA--------------- 737
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG--KGLPAIVSILKHF 817
+ ++F+ L G E +D+ +E ES + L +P + L ++
Sbjct: 738 ---CRPEDFVKVLEGFEQIDRT-------MELLESYGGGNGLVDRLIASMPDLKEPLGYW 787
Query: 818 KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTI 877
K AFD A + +IP G++ D+D + ++ I+ L + L+ Q+ L + + +
Sbjct: 788 KTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTALRCKTAKFTDV 847
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
GK++Y +EVP++++ VP + S+ RY+ ++ L+ EL +AE +K +
Sbjct: 848 GKEVYQIEVPKTVK--VPPKWRQMSATSAVKRYYFKELQDLVRELQEAEETHSQIVKEVA 905
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
R +F + W Q + + L ++ SL A L C
Sbjct: 906 SRFFKRFDLDYETWLQAIRIISQLDCLI---SLAKASAALGQPCC 947
>gi|254578938|ref|XP_002495455.1| ZYRO0B11792p [Zygosaccharomyces rouxii]
gi|238938345|emb|CAR26522.1| ZYRO0B11792p [Zygosaccharomyces rouxii]
Length = 1210
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 204/696 (29%), Positives = 335/696 (48%), Gaps = 69/696 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+WE KS D
Sbjct: 241 FNKQNEERYQWL-VDVRDAQRRPKDDPEYDPRTLYIPSSAWSKFTPFEKQYWEIKSSMWD 299
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DA + D + G + + G PE +F + + GY+
Sbjct: 300 CIVFFKKGKFFELYEKDAALANNLFDWRIAGGGRANMQLAGIPEMSFDYWASQFIQYGYK 359
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-- 458
V V+Q E+ E+R KG +V+RE+ V+T GTLT+G +L ++ A+Y +A+
Sbjct: 360 VAKVDQRESMLAKEMREGSKG----IVQRELQCVLTSGTLTDGNMLQSDL-ATYCLAVRE 414
Query: 459 -------TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
E+ Q + R FG+ +D +T I L + DD +C+ L ++S+L P E
Sbjct: 415 ESGNYYDLENGQDLTETAGKRIFGVAFIDTSTGEIELIEFDDDNECTKLDTIMSQLTPKE 474
Query: 512 IIKPANMLSPETERAILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKA 570
+I + LS + + + N + N + PL EF+D E T E+ + ++ +
Sbjct: 475 VIMEKSNLSNLAHKIVKYNAAPNAIFNYVKPLEEFYDFERTFDELTSSEHKYFPD----- 529
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ P +L G SA GG L YLK LDE+L+
Sbjct: 530 -------------MNHWPLVLKTYYEKGKKIG--FSAFGGLLHYLKWLKLDESLISIGNI 574
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + + +VLD L+NLE+F NS G GTL+ N +T GKR+++
Sbjct: 575 R-----EYNPIKSQNSLVLDGVTLQNLEIFTNSFDGTDKGTLFKLFNKALTPMGKRMMKR 629
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
WL PL + I +R D V L L ALS+LPD+ERL+AR+ + S N N
Sbjct: 630 WLMHPLLHRSDIEKRLDTVDCLLSDTDLRDL-LETALSKLPDLERLVARVHSGS-LNVMN 687
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
+KV+ + K ++E + L S ++ E+ +
Sbjct: 688 FDKVIQGFEVITKLIRELTNYELRGSLATYVSSVPSSMFEDVD----------------- 730
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
++ +AFD +A G +IPH GV+ ++D + K+KE+E L L+ +K +
Sbjct: 731 -----NWSNAFDRTKAVTEGILIPHRGVEPEFDESLDKIKELENELDDLLRTYKKQFKCS 785
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
S+ Y GK++YL+EVP S VP D+ + K F RY++ +K+L +++A +
Sbjct: 786 SVQYKDSGKEIYLIEVPISATKHVPSDWMQMGANKNFKRYYSDEVKQLARSVAEARELHK 845
Query: 931 SALKSILQRLIGQF-CEHHNKWRQMVAATAGLTLIL 965
+ + + RL +F + + W + A + + +L
Sbjct: 846 ALEEDLKNRLCRKFDTRYESSWLPTIHAISNIDCLL 881
>gi|336273106|ref|XP_003351308.1| MSH6 protein [Sordaria macrospora k-hell]
gi|380092828|emb|CCC09581.1| putative MSH6 protein [Sordaria macrospora k-hell]
Length = 1230
Score = 285 bits (730), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 199/696 (28%), Positives = 338/696 (48%), Gaps = 75/696 (10%)
Query: 285 SAREADKFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
SA+ K H P++R DA R RPG YDP ++Y+PP R S + Q+WE
Sbjct: 293 SAKTKPKAHTREPEQRYPWLADIQDANRNRPGHPDYDPGSVYVPPSAWRQFSPFETQYWE 352
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLA 395
K D V+FFK GKFYEL+E DA +G + DL+ + G PE + M V +
Sbjct: 353 IKKNLWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLEMWVNQFV 412
Query: 396 RKGYRVLVVEQTETPEQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDAS 453
KGY+V V+Q E+ E+R ++ +K DK+++RE+ ++T GTL +G +L + +A
Sbjct: 413 AKGYKVARVDQMESALGKEMRERDTKAKKADKIIRRELACILTGGTLVDGSMLQ-DDNAV 471
Query: 454 YLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
Y A+ ES + PA FGI VD AT + + + DD+D + +++ P E
Sbjct: 472 YCAAIKESVIDDKPA-------FGIAFVDAATGQFFISEFEDDVDLTKFETFVAQTSPRE 524
Query: 512 IIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
+I + LS + R IL++ P + N L +EFW+A+TT E+ ++ E ++
Sbjct: 525 LILEKSHLSTKALR-ILKNNTAPTTIWNYLKMGTEFWEADTTRRELDCSGYFVSGEGQDE 583
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
+ E + ++SALG YL+ ++ LL
Sbjct: 584 --------------------VWPEKLKEARGKDLLMSALGALTQYLRMLKIERNLLSQGN 623
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + + + + ++LD +L NLE+F N+ +G GTL+ LN C+T FGKRL R
Sbjct: 624 F-----AWYNPIHRNGTLILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFR 678
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
W+ PL N + ER DAV L ++ F +F +S++ D+ERL++R+ A + G
Sbjct: 679 QWVCHPLCNIQKLNERLDAVDMLND-DRSFQEQFSSQMSKMADLERLISRIHAGACKPG- 736
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
+F+ L G E +D+ L A + + ++ +P
Sbjct: 737 -----------------DFVKVLEGFERIDRTMELLEAF--GGGNGLVDRLIA---SMPN 774
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ L ++K AFD A + +IP G+ D+D + +++ I+ L + L+ Q+ L
Sbjct: 775 LKEPLGYWKTAFDRKRARDDKLLIPEQGIVEDFDRSQEELDRIKGELQELLERQKTALRC 834
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
+ + +GK++Y +EVP++++ VP + S+ RY+ ++ L+ EL +AE
Sbjct: 835 KTAKFTDVGKEVYQIEVPKTVK--VPPKWRQMSATSAVKRYYFKELEDLVRELQEAEETH 892
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+K + + +F + W Q + + L ++
Sbjct: 893 SQIVKEVASKFFKRFDLDYETWLQAIRIISQLDCLI 928
>gi|358331876|dbj|GAA30349.2| DNA mismatch repair protein MSH6 [Clonorchis sinensis]
Length = 835
Score = 285 bits (730), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 180/531 (33%), Positives = 275/531 (51%), Gaps = 56/531 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D+ RR+P YDPRTL++P DFL S G +QWWE KSK+ D ++FFK+GKFYE++ MD
Sbjct: 288 DSARRKPSHPDYDPRTLFVPGDFLAKQSPGMRQWWELKSKYADAILFFKVGKFYEMYHMD 347
Query: 361 AHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK 420
A VG + L L YMKG HCGFPE FS E+L +KGY+V VEQTE+ + + R + +
Sbjct: 348 AAVGVEHLGLVYMKGSFAHCGFPEIAFSRMSEQLVKKGYKVARVEQTESVDAMTERTRGR 407
Query: 421 GSKDKVVKREICAVVTKGTLTEG-----------------------ELLSANPDASYLMA 457
+KVVKRE+C + T GT T E L P+ S+L+A
Sbjct: 408 PGSEKVVKREVCQLSTPGTCTTSMRTELSYSSNATVSDSEDGAVSTEALDTAPE-SFLLA 466
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ E +S S++ FG+ +++ I++GQ DD C L L+S P +II
Sbjct: 467 IGEET---SSGSSEHVFGVALLNAINGTILMGQFHDDRHCGRLRTLISHYFPSQIIVEKG 523
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANS 577
+S + + V L +FW A+ T++E++ +AE + + +
Sbjct: 524 SVSHSIKILLKTCLSGVPVEYLTHGKQFWSAKETIIELETAGYFSSAEHGKQQSISDSRH 583
Query: 578 QAEGDGLTCLPGILSELISTGDS-GSQV-------LSALGGTLFYLKKSFLDETLLRFAK 629
G PG L ++S D G V +S LG ++YL+ +D ++
Sbjct: 584 YPLFPGKENWPGTLVRMLSEDDPLGRSVKTDYDLAMSCLGAIVYYLRYCLIDRQVMSLGL 643
Query: 630 FEL-LP--------CSGFGDM--AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+L +P +G G + +++ +VLD+ L NL++ NS +G GTL +L+
Sbjct: 644 IDLYMPPDCLQIATTTGSGQVFYSRQTSLVLDSITLANLDILHNSVTGTREGTLLERLDT 703
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
C T FG+RLLR WL P N LIR RQDAV L + + +L RLPD ERLL
Sbjct: 704 CCTPFGRRLLRQWLTAPPCNPKLIRARQDAVDNLIDIGGQLN-SIKLSLRRLPDFERLLT 762
Query: 739 RL-FASSEANGRNS--NKVVLYEDA--AKKQLQEFISALHG----CELMDQ 780
++ S+ N +N + +L+E+ +++ + +F++ LHG CE++ Q
Sbjct: 763 KIHLVGSKKNEKNHPDARAILFEEVQYSRRNIVDFLATLHGFEVACEIITQ 813
>gi|68072659|ref|XP_678243.1| DNA repair protein [Plasmodium berghei strain ANKA]
gi|56498644|emb|CAH98713.1| DNA repair protein, putative [Plasmodium berghei]
Length = 1090
Score = 285 bits (729), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 213/681 (31%), Positives = 335/681 (49%), Gaps = 79/681 (11%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD P + YD T++ PP + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 144 RDINLNPPDNPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 203
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 204 RFYEIFYIDACIMHTICGLNWMNGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 263
Query: 411 EQLELRRK-EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-----TESNQS 464
++LE R K G KDK +KREI + TKGT+ +LSA + Y++ +
Sbjct: 264 KELEQRNKTSSGPKDKAIKREINEIYTKGTILHDNMLSA--ETKYIICFHFDDIEDIEDD 321
Query: 465 PASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
+ S +RC FG V DVATS I +G DD L LL++L P EI+ + +S E
Sbjct: 322 NNTGSQNRCNFGFVVSDVATSYISVGYCNDDESRIELRTLLAQLCPAEILYCSKNISKEV 381
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+I ++ P +L ++ F + ++ E+ NK N+ +
Sbjct: 382 -LSIFKNI--PTCPELTSVNSFPNIIASLDEV------------NKYFENIPKA------ 420
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
+ + V+ A GG + YL+ LD+ +L+F K E F D+ K
Sbjct: 421 -----------LEAYKEQNSVICAFGGFIVYLRSLLLDKKILKFCKIE------FYDLFK 463
Query: 644 KP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
K YMVLDA AL++LE+ E ++SG++ +LY +N T FG R +R W+ PL N I
Sbjct: 464 KDNYMVLDATALKHLEILE-TQSGETKNSLYDYVNKTCTNFGARNMRRWVCSPLLNCDKI 522
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK 762
+R D V LR + +L R L +LPD+ERLL ++ + + R + V +++
Sbjct: 523 NQRLDVVEFLRKNDHILSL-IRLKLKKLPDIERLLNKICIQASQSERGA---VFFDNIVN 578
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTE----SRQLHHILTPGK--------GLPAI 810
+L+EF++ L+ + +D + +I +N E +R T K P I
Sbjct: 579 TKLKEFVTFLNAFKEIDNMLIEINSI-DNEEDLIPTRLFEITNTYNKISKNNIKGNYPEI 637
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
I F + + + P G D D+ KK K+IE L L + +K
Sbjct: 638 DKITNEF---LEKIYFDGEKEYKPAEGCDEAIDAINKKEKDIEKELNNILVDMKKNFKIP 694
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
++ YV K Y +E P+++ S ++ E+ S KKGF R IK L+ L E EK+
Sbjct: 695 NLKYVH-AKYKYEIECPDNVPKSFLKEVEITSVKKGFIRIQNEEIKNLVEMLEDIEQEKK 753
Query: 931 SALKSILQRLIGQFCEHHNKW 951
A+ Q++ F EH+ K+
Sbjct: 754 DAIYPFFQKIFHLFYEHYEKY 774
>gi|367008344|ref|XP_003678672.1| hypothetical protein TDEL_0A01290 [Torulaspora delbrueckii]
gi|359746329|emb|CCE89461.1| hypothetical protein TDEL_0A01290 [Torulaspora delbrueckii]
Length = 1225
Score = 283 bits (725), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 226/802 (28%), Positives = 380/802 (47%), Gaps = 106/802 (13%)
Query: 182 EMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS 241
E+++ E+E D+ D S+DD V ED + DL+ E+ + K + +K +
Sbjct: 179 ELDDEEEEYVPDKKDESEDDL--------VEEDGDDDLLALAESSSPKPEK---TVLKHT 227
Query: 242 KSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRD 301
S A KSP I+P+ ++F + +++H+L D RD
Sbjct: 228 PSRPQKPFAVKKSPSIRPLST----------------PKHQKFGKQNEERYHWL-VDERD 270
Query: 302 AKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDA 361
A R D YDPRTLY+P + +KQ+WE KSK D ++FFK GKF+EL+E DA
Sbjct: 271 ASGRPITDPQYDPRTLYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDA 330
Query: 362 HVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
+G DL+ G + + G PE +F + ++GY+V V+Q E+ E+R
Sbjct: 331 MLGNHLFDLKIAGGGRANMQLAGIPEMSFDYWASQFIQRGYKVAKVDQRESMLAKEMREG 390
Query: 419 EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE----------SNQSPASQ 468
KG +VKRE+ V+T GTLTEG +L ++ A+Y +A+ E NQSP
Sbjct: 391 SKG----IVKRELQYVLTSGTLTEGNMLQSDL-ATYCLAVREESGNFYDLENDNQSPGV- 444
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
+ R FG+ +D AT + L + DD +C+ L ++S++ P E+I + LS + I+
Sbjct: 445 APKRLFGVAFIDTATGELNLVEFEDDDECTKLDTIMSQVNPKEVIMEKDNLSSLAHK-II 503
Query: 529 RHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ P + N + P +EF+ + T E+ DS +++
Sbjct: 504 KFNAAPQAIYNYIKPDTEFYGYDKTSKELD--------------DSKYFPDKSQ------ 543
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P IL + G SA GG L+YL+ LDE+L+ + + F +
Sbjct: 544 WPAILKQYYEQGKKIG--FSAFGGLLYYLQWLKLDESLISMGNVKEYNPTQFQNS----- 596
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+V+D L+NLE+F NS G GTL+ N ++ GKR+++ WL PL I +R
Sbjct: 597 LVMDGVTLQNLEIFTNSFDGTDKGTLFKLFNKAISPMGKRMMKKWLMHPLLKQKDINKRL 656
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
D V L L ++LPD+ER L+R+ + +++
Sbjct: 657 DTVESLMSDGNLRDL-LESTFAQLPDLERTLSRVH------------------SGNLKVK 697
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPG-KGLPAIVSI-LKHFKDAFDWV 824
EF + G E ++ +L+ S L L+ +P + + ++++ +AFD
Sbjct: 698 EFDKTIQGFE-------AVVDLLQKMSSHSLEGSLSDYVSSIPKSLFVDVENWSNAFDRE 750
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
+A N G ++PH GV+ ++D + K+KE+E L LK +K +++ Y GK++Y +
Sbjct: 751 KAVNEGILLPHRGVEPEFDESVDKIKELEDQLEDLLKAYKKQFKCSNLQYKDCGKEIYTI 810
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EVP S+ +P ++ ++ K RY++ ++ L +++A + + + RL +F
Sbjct: 811 EVPVSVSKYIPSNWVQMAANKSTKRYYSDEVRVLARSVAEARELHKVLEEELRTRLCKKF 870
Query: 945 CEHH-NKWRQMVAATAGLTLIL 965
H+ W V A A + +L
Sbjct: 871 DMHYGTSWMPTVQAIASIDCLL 892
>gi|389641339|ref|XP_003718302.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|351640855|gb|EHA48718.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|440466802|gb|ELQ36046.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae Y34]
gi|440480286|gb|ELQ60960.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae P131]
Length = 1218
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 208/683 (30%), Positives = 327/683 (47%), Gaps = 83/683 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D R P +D T+++PP S +KQ+WE K K D V+FFK GKFYEL+E
Sbjct: 300 QDMDRHSPDHPDFDKSTIFIPPMAWNKFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYEN 359
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRR- 417
DA +G + DL+ + G PE + + V + KGY+V V+Q E+ E+R
Sbjct: 360 DATIGHQLFDLKLTDRVNMRMVGVPEASLDIWVNQFVAKGYKVARVDQMESALGKEMRER 419
Query: 418 ---KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDR 472
K+ +DK+++RE+ ++T GTL EG +L + A++ +A+ ES N PA
Sbjct: 420 GGDKKNKKEDKIIRRELACILTGGTLVEGSMLQDDM-ATFCVAIKESTINNHPA------ 472
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
FGI VD AT + + Q DD+D + +++ P E++ + +S + R IL++
Sbjct: 473 -FGIAFVDAATGQFFISQFEDDVDLTKFETFVAQTSPRELLLEKSNISTKALR-ILKNNT 530
Query: 533 NP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
+P + N L P SEF D ETT E+ + AD GD P
Sbjct: 531 SPTTIWNYLKPDSEFLDPETTRRELS------CGDYFKVADG--------GDETEVWP-- 574
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
E + ++SA+G + YL+ L+ +LL FE + + + +VLD
Sbjct: 575 --EALDKSRDKDLLMSAMGALVHYLRVLKLERSLLSQGNFEW-----YNPIHRDGTLVLD 627
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
+L NLEVF NS +G GTL+ LN C+T FGKRL R W+ PL N I ER DAV
Sbjct: 628 GQSLINLEVFSNSVNGGPEGTLFNLLNRCITPFGKRLFRQWVCHPLCNIKKINERLDAVD 687
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
L ++ +F +S++PD+ERL++R+ A V ED F+
Sbjct: 688 ML-NADRSILEQFSSLMSKMPDLERLISRIHAG----------VCKAED--------FVR 728
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP--AIVSI------LKHFKDAFD 822
L G E ++ A S L A G GL I S+ L +K AFD
Sbjct: 729 VLEGFEQIEYAMSMLSA-------------FGGGNGLVDRLISSMLDLKEPLTFWKSAFD 775
Query: 823 WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+ + +IP G++ D+D + + I+ L L +Q+ L S+ + +GK++Y
Sbjct: 776 RKKVRDEKLLIPERGIEEDFDESADNIVRIKKDLQSLLDKQKAALKCKSLKFTDVGKEIY 835
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+E P+S + VP+D+ S+ RY+ + +L+ EL +AE +K + R
Sbjct: 836 QIEAPKSTK--VPKDWRQMSATSAVKRYYFRELDELVRELQEAEETHSQIVKDVAARFFK 893
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
+F + W Q + + L ++
Sbjct: 894 RFDVDYAIWIQAIRIISQLDCLI 916
>gi|213406337|ref|XP_002173940.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
gi|212001987|gb|EEB07647.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
Length = 1178
Score = 282 bits (722), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 225/781 (28%), Positives = 380/781 (48%), Gaps = 96/781 (12%)
Query: 211 VSEDEEV-DLVDEQENKVL------------RGRKRKSSGVKKSKSDGNAVNADFKSPII 257
+EDEE+ D VDE E+ ++ + RK +SSG + G+ + S
Sbjct: 167 ANEDEEMLDAVDEDEDLIVSDDEKPKPAVSRQPRKPRSSGALDAFRMGSTSDTPSAS--- 223
Query: 258 KPVKIFGSDKLSNGFDNPVMGDVSER-----FSAREADKFHFLGPDRRDAKRRRPGDVYY 312
+ + +S+G +N + D + F A ++ +L D RDA RP D Y
Sbjct: 224 ESTSRMSTPSMSSGRNNVLSRDEKRKVRMAAFEKTNAGRYEWLL-DIRDADGNRPTDEDY 282
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPRTLY+PP + +KQ+WE K MD V+FF+ GKFYEL+E DA +G + L+
Sbjct: 283 DPRTLYIPPSAWASFKPFEKQYWEIKKNLMDTVVFFQKGKFYELYENDAAIGHQVFALKL 342
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-RKEKGSKDKVVKRE 430
+ G PE F + KGYR+ V+Q ET E++ RK ++KVV+R
Sbjct: 343 TDRVNMKMVGIPEATFEYWAAQFIAKGYRIARVDQLETALGKEMKDRKNSKREEKVVQRG 402
Query: 431 ICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+ V+T GTL + +L+++ ++Y MAL E+ +P S++ G+C VD AT + +
Sbjct: 403 LTQVLTSGTLVDESMLTSDM-STYCMALKEA-PNPQSRADGPLLGVCFVDTATGIVRACE 460
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH-TRNPLVNDLVPLSEFWDAE 549
DD+ + L LL+++RP E++ + +S +T R I + + ++++ P +EFWD E
Sbjct: 461 FQDDISRTKLDTLLTQIRPRELLLEKSGISQKTMRTIKNGLSASSTIHNIKPYNEFWDQE 520
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
TV E + + + E +P L ++ D SA+G
Sbjct: 521 RTVREFDSC--------------DFFDEHKE------MPDALRNVL---DKNPLAASAVG 557
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
++YL++ LD+ + F + S + ++L+ L+NLE+F NS G
Sbjct: 558 ALVWYLRQLKLDKDIFSMGNFHIYDAS-----QQSTSLLLNGQTLKNLEIFNNSFDGGEE 612
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA--- 726
GTL+ + CVT FGKRL +W+ PL + I R D V L ++ P R A
Sbjct: 613 GTLFRLMCRCVTPFGKRLFHSWMNHPLRSPEQINGRLDVVELL--LDNP---NLRDAILG 667
Query: 727 -LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
L +LPD+ER+++R+ AS + + +F+ L G + +D L
Sbjct: 668 ILHKLPDLERMISRVHAS------------------RCKPIDFLRILEGFKRIDTGIHEL 709
Query: 786 ----GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
G +++ T L I+ + +P + S L + AF W A + G +P G + +
Sbjct: 710 KEDFGTLMKGT---ALERIV---ERMPDMASELDSWSRAFSWSRARDEGVFVPEPGFEPE 763
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
YD + + L + L +K L +S+T+ IGK++Y +EVP ++ VP +
Sbjct: 764 YDESKTHQNALIDDLHELLNRYKKELKCSSLTFKDIGKEVYQVEVPVDVK--VPVSWCKM 821
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ-RLIGQFCEHHNKWRQMVAATAG 960
S K F RY+T ++K + +L +++ E A+++ +Q + +F E ++ W +M+ A A
Sbjct: 822 SGTKKFNRYYTDELRKKIKKLLESQ-ETHFAIEARMQDKFYARFDEKYSDWVRMIKAVAS 880
Query: 961 L 961
+
Sbjct: 881 M 881
>gi|403332180|gb|EJY65086.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1185
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 205/681 (30%), Positives = 334/681 (49%), Gaps = 64/681 (9%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D ++R+P D YDP TLY+P D + Q+WE K + DK++FFK+GKFYE+F D
Sbjct: 262 DMEKRKPEDPEYDPTTLYIPGDKWNGFTPAMYQYWEIKVHNYDKILFFKLGKFYEIFYND 321
Query: 361 AHVGAKELDLQYMKGEQP-HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A + K LDL +M G + H GFPE+ + + GY+V V+EQTETP+ +E R KE
Sbjct: 322 AIICQKLLDLNWMGGAKKLHIGFPEKVLDKYLVIMVNHGYKVAVIEQTETPQMMERRLKE 381
Query: 420 K-------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDR 472
+ KDK VKREI ++VTKGT + A + +++++
Sbjct: 382 ERLAKKKMEPKDKCVKREIFSMVTKGTFKDNNQSVAGYEPKFVLSVKRYGSE-------- 433
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR 532
G+ DV T +I +GQ DD S LL ++RP+E+I +++ + + +
Sbjct: 434 -LGVTFFDVQTLKIYVGQFTDDEALSNFRTLLCQIRPIEVIHEREIINSDMLKMLKNSPV 492
Query: 533 NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
P+ +VP KN + I ++ N ++ + S+ + L +
Sbjct: 493 VPVFTPMVP--------------KNCWGVI--KTCNALETYIGPSKNWPELLQKFKEQDA 536
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
EL L +LG + +L+++ + + + +F L ++ YMVLD+
Sbjct: 537 EL---------ALQSLGMAIAFLEEALIAQQTISTGEFHLYTPE---TQSQLEYMVLDSQ 584
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
AL++LEV E S SG G+L ++HC + FG+R L+ W+ PL N I ER DA+ L
Sbjct: 585 ALQHLEVVE-SASGKFEGSLLHYIDHCKSPFGRRQLKRWVLSPLMNIQRIEERLDAIEDL 643
Query: 713 RGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISA 771
+ + + FR LS+LPD+E+LLA+++ S +N K + +E+ + +L+EF
Sbjct: 644 --IQHQYETDVFRSKLSKLPDIEKLLAKIYTYS---IKNRVKAIYFENVSLIKLKEFRIL 698
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTP-----GKGLPAIVSILKHFKDAFDWVEA 826
L +M++ C SL +S++L +LTP G I I+K F+ W +
Sbjct: 699 LKHFRVMEELCESLMNKKNEFKSQRLRQLLTPDTEQYGLFPTGIKDIVKEFEGMIVWKKT 758
Query: 827 NNSG----RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
G P G+D ++D A + V +++ L +L++ R D I + + K Y
Sbjct: 759 QGGGPDDEIPEPQMGLDEEFDRANEAVDKVKQKLESYLQQIRSQFKDRRINW-SHAKYRY 817
Query: 883 LLEVPESL--RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
LE+P L P D+E S + G+ R+ T IK+ + EL E + + L L L
Sbjct: 818 ELELPAELIDGKKKPADFEFTSQRNGYQRFHTKEIKQYVEELEVVEEKLKDDLTPFLCAL 877
Query: 941 IGQFCEHHNKWRQMVAATAGL 961
+F EH + W + + L
Sbjct: 878 FQKFHEHKDLWNRTMNVITEL 898
>gi|365761545|gb|EHN03191.1| Msh6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1247
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 205/704 (29%), Positives = 343/704 (48%), Gaps = 79/704 (11%)
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+WE KSK
Sbjct: 271 SSKFNKQNEERYQWL-VDERDAQRRSKNDPEYDPRTLYIPSSAWNKFTPFEKQYWEIKSK 329
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARK 397
D ++FFK GKF+EL+E DA + DL+ G + + G PE +F + +
Sbjct: 330 MWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWAAQFIQM 389
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++ A++ +A
Sbjct: 390 GYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL-ATFCLA 444
Query: 458 LTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ E NQ+ ST + FG +D AT I + + DD +C+ L L+S+
Sbjct: 445 IREEPGNYYNQAQLDSSTMAKKLNTKIFGAAFIDTATGEIQMLEFEDDSECTKLDTLMSQ 504
Query: 507 LRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
++P+E++ N LS + + N + N++ EF+D++ T EI + T E
Sbjct: 505 VKPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDSDKTYSEIISSAYFPTEE 564
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETL 624
P +L D G V SA GG L+YLK LDE L
Sbjct: 565 D--------------------WPDVLKNY---HDMGKNVGFSAFGGLLYYLKWLKLDENL 601
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ + + + + MVLD L+NLE+F NS G GTL+ N +T G
Sbjct: 602 ISMKNIK-----EYNFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMG 656
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFA 742
KR+++ WL PL + I R D++ L Q L + S+LPD+ER+LAR+
Sbjct: 657 KRMMKKWLMHPLLHKNDIENRLDSIDSLL---QDITLREDLESTFSKLPDLERMLARIH- 712
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
S R+ KV+ A + + + S+L L + + E
Sbjct: 713 SRTIKVRDFEKVI----TALETIVQLQSSLQNNNLKGDVSQYISSFPEE----------- 757
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+V ++++ +AF+ A N I+P G D+++D + K++E+E L K L
Sbjct: 758 -------LVEGVENWTNAFERQRAINENVIVPQRGFDVEFDKSLDKIQELEGELMKILVR 810
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
RK ++I Y GK++Y +E+P S+ VP ++ ++ K + RY++ ++ L +
Sbjct: 811 YRKEFKCSNIQYKDSGKEIYTIEIPVSVTARVPSNWVQMAANKTYKRYYSDEVRTLARSM 870
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 871 AEAKELHKTLEEDLKNRLCQKFDAHYNSIWMPTIQAISNIDCLL 914
>gi|410074455|ref|XP_003954810.1| hypothetical protein KAFR_0A02370 [Kazachstania africana CBS 2517]
gi|372461392|emb|CCF55675.1| hypothetical protein KAFR_0A02370 [Kazachstania africana CBS 2517]
Length = 1206
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 209/725 (28%), Positives = 350/725 (48%), Gaps = 72/725 (9%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P + +F+ + +++ +L + DA+ R P D YDPRTL++P + ++Q+
Sbjct: 227 PQIKSKQNKFTKQNEERYQWL-VNETDAQGRPPTDPEYDPRTLHIPSSAWNKFTPFERQY 285
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNV 391
WE KSK D V+FFK GKF+EL+E DA +G DL+ + G PE +F
Sbjct: 286 WEIKSKMWDCVVFFKKGKFFELYEKDALLGNSLFDLKLAGNGRANMQLAGIPEMSFEYWA 345
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ V+T GTLT+G++L ++
Sbjct: 346 SQFIQHGYKVAKVDQRESMLAKEMREGSKG----IVKRELECVLTSGTLTDGDMLHSDL- 400
Query: 452 ASYLMALTE-------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
A+Y +A+ E S D+ FGI +D AT + + + DD +CS L ++
Sbjct: 401 ATYCLAVREESGDFYNSFDDSTVNHPDKIFGISFIDTATGELQMLEFEDDNECSKLDTIM 460
Query: 505 SELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
S++RP EII N LS + + N + N++ P +EF++ + T E+
Sbjct: 461 SQIRPKEIIIEKNNLSNLANKIVKFNSAANAIFNNVKPDTEFYNFDRTYDEL-------- 512
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++++ + + P IL E SA GG L+YLK LD +
Sbjct: 513 ----------ISDNAKYFEDYSKWPKILKEYYEAKRRAG--FSAFGGLLYYLKWLKLDGS 560
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L+ + + + + ++LD L+NLE+F NS G GTL+ LN +T
Sbjct: 561 LISMGNIK-----EYNPIKSQNSLILDGVTLQNLEIFGNSCDGTEKGTLFKLLNRAITPM 615
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
GKR++RTWL PL I +R D+V L + + A S+LPD+ER+LAR+ +S
Sbjct: 616 GKRMMRTWLMHPLLQKNDIEKRLDSVDILMS-DAELRDKLEVAFSKLPDLERMLARIHSS 674
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ ++++F+ + G E C L I + L ++
Sbjct: 675 T------------------IKVKDFVKVIQGFE---DICDLLKTISKTELEGALKQYISQ 713
Query: 804 GKGLPA-IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
+P+ + ++++ + FD +A+ G IIPH G++ D+D + +KE+E L L E
Sbjct: 714 ---VPSSLYDDVENWTNVFDRYKASEEGIIIPHRGIEADFDKSLDDIKELENELDIILNE 770
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
RK +SI Y GK++Y +EVP + S+P ++ + K RY++ +K L +
Sbjct: 771 YRKKFKCSSINYKDSGKEIYTIEVPTMIVKSIPSNWIQMGANKSTKRYYSDEVKILARAM 830
Query: 923 SQAESEKESALKSILQRLIGQFCEHHN-KWRQMVAATAGLTLILLDGSLLHAFLILQSNS 981
++A + + + RL +F + N W + A A + ++ +L L S S
Sbjct: 831 AEARESHKILEEDLKNRLCKKFDKGFNTSWMPTIHAIASVDCLI---ALTRTSECLGSPS 887
Query: 982 CSSEM 986
C E
Sbjct: 888 CRPEF 892
>gi|255728741|ref|XP_002549296.1| hypothetical protein CTRG_03593 [Candida tropicalis MYA-3404]
gi|240133612|gb|EER33168.1| hypothetical protein CTRG_03593 [Candida tropicalis MYA-3404]
Length = 1222
Score = 281 bits (720), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 201/674 (29%), Positives = 335/674 (49%), Gaps = 63/674 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RDA++R D YDPRTLY+P + +KQ+W KSK + V+FF+ GKFYEL+E
Sbjct: 296 RDAEKRTVDDPEYDPRTLYIPQSAWSKFTNFEKQYWGIKSKMWNTVVFFQKGKFYELYEN 355
Query: 360 DAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA + + DL+ G + + G PE +F ++ GY+V V+Q E+ E+R
Sbjct: 356 DAIIANTKFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQKESLLAKEMR 415
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
++K++KRE+ ++T GTLT+ +++ N ++Y +++ E + + FG+
Sbjct: 416 GGTT-KEEKIIKRELTGILTGGTLTDLNMIT-NDMSTYCLSIKEEENEDGT----KVFGV 469
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR---HTRN 533
VD ATS + ++ DD +C+ L L+++++P E+I L + IL+ H+ N
Sbjct: 470 AFVDTATSELNFIELQDDAECTKLDTLITQVKPKEVICEKGNLC-QIANKILKFCAHSEN 528
Query: 534 PLVNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILS 592
+ N L P++EFWD + T+ E +K+ Y AE L D + P I
Sbjct: 529 QIWNILNPITEFWDYDNTIEELVKSKYYE--AEDL--------------DDYSKYPEI-- 570
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
L++ D+ SA GG L+YLK LD +++ S + +M+LD
Sbjct: 571 -LVTYKDNHPLAFSAFGGLLYYLKLLKLDSSIMSLGNIHEYQISKNAN----NHMILDGI 625
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L NLE+ N+ G GTL+ LN T+FGKRLL+ W+ PLY I R D+V
Sbjct: 626 TLNNLEILHNTADGSDKGTLFKLLNRATTSFGKRLLQQWILHPLYKIDEINARYDSVDFF 685
Query: 713 RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ L LPD+ERLLAR+ A + + ++F+ +
Sbjct: 686 MNDGLELRSAIQDVLFTLPDLERLLARVHAKT------------------LKFRDFLRVI 727
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS-ILKHFKDAFDWVEANNSGR 831
E + + + L N E L++ L+ P +S ++ ++D+FD +A S
Sbjct: 728 ESFEAIAKLSTKLKD-FANVECGILYNYLS---SFPHEMSELIDQWEDSFDREQA-KSDV 782
Query: 832 IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLR 891
IIP GVD +D + + ++E+ L + LKE ++ SI Y GK++YL+EVP L
Sbjct: 783 IIPASGVDEQFDESQTLLGDLESQLNQKLKEYKRTYKSQSICYRDSGKEIYLIEVPVKL- 841
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
+VP+D++ + RYW+P +KKL +L + + ++ R+ +F H+ W
Sbjct: 842 -NVPQDWQQMGATSKVKRYWSPEVKKLARKLMEQRELHKQVCDTLKNRMFEKFDAHYQTW 900
Query: 952 RQMVAATAGLTLIL 965
++ + + +L
Sbjct: 901 MGVIRSIGNIDCLL 914
>gi|83315667|ref|XP_730891.1| G/T mismatch binding protein [Plasmodium yoelii yoelii 17XNL]
gi|23490759|gb|EAA22456.1| G/T mismatch binding protein-related [Plasmodium yoelii yoelii]
Length = 1261
Score = 281 bits (720), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 212/685 (30%), Positives = 335/685 (48%), Gaps = 83/685 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD P YD T++ PP + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 265 RDINLNAPDHPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 324
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 325 RFYEIFYIDACIMHTICGLNWMNGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 384
Query: 411 EQLELRRK-EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL---------TE 460
++LE R K G KDK +KREI + TKGT+ +LSA + Y++ +
Sbjct: 385 KELEQRNKTSSGPKDKAIKREINEIYTKGTILHDNMLSA--ETKYIICFHFDDIEDIGDD 442
Query: 461 SNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
N + + S +C FG V DVATS I +G DD L LL++L P EI+
Sbjct: 443 DNNNNNAGSQTKCNFGFVVSDVATSYISVGYCNDDESRIELRTLLAQLCPAEIL----YC 498
Query: 520 SPETERAILRHTRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
S + +L +N P +L ++ F + ++ E+ + E++ KA
Sbjct: 499 SKNINKEVLSIFKNIPACPELTSVNSFPNIIASLDEVNKYF-----ENIPKA-------- 545
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
+ + V+ A GG + YL+ LD+ +L+F K E F
Sbjct: 546 ----------------LEAYKEQNSVICAFGGFIVYLRSLLLDKKILKFCKIE------F 583
Query: 639 GDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
D+ KK YMVLDA AL++LE+ E ++SG++ +LY +N T FG R +R W+ PL
Sbjct: 584 YDLFKKDNYMVLDATALKHLEILE-TQSGETKNSLYDYVNKTCTNFGARNMRRWVCSPLL 642
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY 757
N I +R D V LR + +L R L +LPD+ERLL ++ + + R + V +
Sbjct: 643 NCDKINQRLDVVEFLRKNDHILSL-IRLKLKKLPDIERLLNKICIQASQSERGA---VFF 698
Query: 758 EDAAKKQLQEFISALHGCELMDQACSSLGAI--LENTESRQLHHILTPGKGL-------- 807
++ +L+EF++ L+ + +D + +I E+ +L I +
Sbjct: 699 DNIVNTKLKEFVTFLNAFKEIDNMLIEINSIDSEEDLIPTRLFEITNTYNKISKNNIKGN 758
Query: 808 -PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P I I F + + + P G D D+ KK K+IE L L + +K+
Sbjct: 759 YPEIDKITNEF---LEKIYFDGEKEYKPADGCDDAIDAINKKEKDIEKELNNILVDIKKI 815
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
L ++ YV K Y +E P+++ S ++ E+ S KKGF R IK L+ L E
Sbjct: 816 LKIPNLKYVH-AKYKYEIECPDNVPKSFLKEVEITSVKKGFVRIQNEEIKNLVEMLEDIE 874
Query: 927 SEKESALKSILQRLIGQFCEHHNKW 951
EK+ A+ Q++ F EH+ K+
Sbjct: 875 QEKKDAIYPFFQKIFHLFYEHYEKY 899
>gi|374110031|gb|AEY98936.1| FAGR116Wp [Ashbya gossypii FDAG1]
Length = 1167
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 207/699 (29%), Positives = 339/699 (48%), Gaps = 76/699 (10%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
FS +++ +L D RDA R P D YDPRTL++P + +KQ+W+ KSK D
Sbjct: 198 FSKNNEERYQWL-VDERDAAGRSPSDPEYDPRTLHIPAQAWARFTPFEKQYWQIKSKMWD 256
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DAH+ + DL+ G + + G PE +F + + GY+
Sbjct: 257 CIVFFKKGKFFELYEKDAHLANQLFDLKIAGGGRANMQLAGIPEMSFDYWASQFIQHGYK 316
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN----------- 449
V V+Q E+ E+R KG +V+RE+ V++ GTLT+ ++L ++
Sbjct: 317 VAKVDQKESMLAKEMREGNKG----IVERELQCVLSGGTLTDLKMLHSDQSTYCLSIHEA 372
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
P A Y M E+ P +Q R FG +D AT RI L + DD +C+ L L++++RP
Sbjct: 373 PLALYAMERGEA-VPPEAQQQGRLFGTAFIDTATGRICLLEFEDDSECTQLDTLMAQVRP 431
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ LS + + +++ + + +EF+D T E+ N
Sbjct: 432 KEVVMEKRNLSVIAHKIVKFNSQPDCIFNYRTSAEFYDYARTFDEVSN------------ 479
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFA 628
G+ P IL + D G +V SA GG L YL+ LD++LL
Sbjct: 480 --------GGYFAGMDSWPAILKQYY---DQGKKVGFSAFGGLLSYLQWLKLDKSLLSMG 528
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
E + + + +VLD L+NLE+F NS G GTL+ +N +T GKR +
Sbjct: 529 MVE-----EYNPLKAQTSLVLDGITLQNLEIFANSFDGTDKGTLFKLVNRAITPMGKRQM 583
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
RTW+ PL I ER D+V L P +L+ LPD+ERLLAR+ + +
Sbjct: 584 RTWVMHPLLRKEHIEERLDSVDQLLN-EMPIRDLLESSLTGLPDLERLLARVHSGNLP-- 640
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPGKGL 807
+++F + G E + + SSL L + SR LH I + K
Sbjct: 641 ----------------IKDFDKVICGFENIVRLISSLNEYELSGSLSRFLHDIPSTLK-- 682
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
S ++ + +D A + G+++P+ GV+ D+D + K++ +E L L E ++
Sbjct: 683 ----SDVESWTTLYDRNMAVSEGKVVPNAGVEPDFDVSLSKMRALEEELDAVLSEYKRSF 738
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
+ I Y GK+LY +E+P S+ SVP ++ + K RY++P ++KL +++A
Sbjct: 739 KCSKIQYKDSGKELYTIELPISIAKSVPSNWTQLGANKSTKRYYSPKVQKLARSMAEARE 798
Query: 928 EKESALKSILQRLIGQFCEHHN-KWRQMVAATAGLTLIL 965
+ + + RL +F ++ + W + A + + IL
Sbjct: 799 LHKILEEGLKGRLYQKFDQNFSTTWFPTIKAISNIDCIL 837
>gi|344302169|gb|EGW32474.1| mismatch repair ATPase MSH6 [Spathaspora passalidarum NRRL Y-27907]
Length = 1223
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 221/802 (27%), Positives = 378/802 (47%), Gaps = 87/802 (10%)
Query: 170 DSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLR 229
D +V+DD++ +D + G+E+ D++V L +Q K +
Sbjct: 193 DDMSDFIVDDDKD----------------EDSPVEEEGEEEEDNDDDVPLRTKQPKKATK 236
Query: 230 GRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA 289
+ K NA +A + PVK S K++ V + F+
Sbjct: 237 SMTPTKRALDKK---FNAKSA-YSPSNYTPVKSSPSTKVT---------PVKKSFAKENE 283
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ +L + +DA++R P D YD RTLY+P + +KQ+WE KSK V+FFK
Sbjct: 284 ERYQWL-VNIKDAEKRTPDDPEYDSRTLYIPQAAWSKFTAFEKQYWEIKSKMWTTVVFFK 342
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYRVLVVEQ 406
GKFYEL+E DA + E DL+ G + + G PE +F ++ GY+V V+Q
Sbjct: 343 KGKFYELYENDAIIANTEFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYKVAKVDQ 402
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
E+ E+R ++K++KRE+ ++T GTLT+ +++S + ++Y +++ E +
Sbjct: 403 KESLLAKEMRGGST-KEEKIIKRELTGILTGGTLTDLDMISDDM-STYCLSIKEEEKDDG 460
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
S + FG+ VD +TS + L ++ DD +C+ L L+++++P EII L +
Sbjct: 461 S----KIFGVAFVDTSTSELNLIELEDDPECTKLDTLITQVKPKEIICEKGNLCGIANKI 516
Query: 527 I--LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ H + + N L P++EFWD + TV N +T++ D D
Sbjct: 517 LKFCAHNNHQIWNQLNPITEFWDYDVTV------ENLVTSKYYPAEDL---------DDF 561
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
+ P +L+ S + +A GG L+YLK LD +++ S +
Sbjct: 562 SQYPVVLT---SFKEKHQVAFNAFGGLLYYLKTLKLDSSIMSLGNIHEYRIS----RNEA 614
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
+++LD L NLE+ NS G GTL+ LN T FGKR L+ W+ PL I +
Sbjct: 615 SHLILDGITLNNLEILNNSTDGGDKGTLFKLLNRATTPFGKRQLKKWILYPLMKINEINQ 674
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQ 764
R DAV L L+ LPD+ERLLAR+ A + +
Sbjct: 675 RYDAVDYLMNDGLEIRSIVESCLNELPDLERLLARIHAGN------------------LR 716
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDW 823
++F+ + E + + + LG N ES + + + P I ++ ++DAFD
Sbjct: 717 FRDFLKVVESFESIAKCLNQLGE-FTNVESGAFYKYI---REFPQEIARLITEWEDAFDR 772
Query: 824 VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYL 883
+A N IIP G+D +D + + +++ L +HLKE +K I Y GK++YL
Sbjct: 773 EQAKND-VIIPAKGIDEQFDESQAIIDDLQGQLDQHLKEYKKRFKSHEICYRDSGKEIYL 831
Query: 884 LEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQ 943
+E P L +P D++ + R+W+P ++KL+ EL + + ++ R+ +
Sbjct: 832 IEFPVKLVKQIPNDWQQMGATSKVKRFWSPEVRKLVRELLEQRERHKMVCDTLRNRMYSK 891
Query: 944 FCEHHNKWRQMVAATAGLTLIL 965
F H+N W +++A + + +L
Sbjct: 892 FDSHYNIWMKVIATISKIDCLL 913
>gi|302309404|ref|NP_986782.2| AGR116Wp [Ashbya gossypii ATCC 10895]
gi|299788343|gb|AAS54606.2| AGR116Wp [Ashbya gossypii ATCC 10895]
Length = 1167
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 207/699 (29%), Positives = 339/699 (48%), Gaps = 76/699 (10%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
FS +++ +L D RDA R P D YDPRTL++P + +KQ+W+ KSK D
Sbjct: 198 FSKNNEERYQWL-VDERDAAGRPPSDPEYDPRTLHIPAQAWARFTPFEKQYWQIKSKMWD 256
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DAH+ + DL+ G + + G PE +F + + GY+
Sbjct: 257 CIVFFKKGKFFELYEKDAHLANQLFDLKIAGGGRANMQLAGIPEMSFDYWASQFIQHGYK 316
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN----------- 449
V V+Q E+ E+R KG +V+RE+ V++ GTLT+ ++L ++
Sbjct: 317 VAKVDQKESMLAKEMREGNKG----IVERELQCVLSGGTLTDLKMLHSDQSTYCLSIHEA 372
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
P A Y M E+ P +Q R FG +D AT RI L + DD +C+ L L++++RP
Sbjct: 373 PLALYAMERGEA-VPPEAQQQGRLFGTAFIDTATGRICLLEFEDDSECTQLDTLMAQVRP 431
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ LS + + +++ + + +EF+D T E+ N
Sbjct: 432 KEVVMEKRNLSVIAHKIVKFNSQPDCIFNYRTSAEFYDYARTFDEVSN------------ 479
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFA 628
G+ P IL + D G +V SA GG L YL+ LD++LL
Sbjct: 480 --------GGYFAGMDSWPAILKQYY---DQGKKVGFSAFGGLLSYLQWLKLDKSLLSMG 528
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
E + + + +VLD L+NLE+F NS G GTL+ +N +T GKR +
Sbjct: 529 MVE-----EYNPLKAQTSLVLDGITLQNLEIFANSFDGTDKGTLFKLVNRAITPMGKRQM 583
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
RTW+ PL I ER D+V L P +L+ LPD+ERLLAR+ + +
Sbjct: 584 RTWVMHPLLRKEHIEERLDSVDQLLN-EMPIRDLLESSLTGLPDLERLLARVHSGNLP-- 640
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPGKGL 807
+++F + G E + + SSL L + SR LH I + K
Sbjct: 641 ----------------IKDFDKVICGFENIVRLISSLNEYELSGSLSRFLHDIPSTLK-- 682
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
S ++ + +D A + G+++P+ GV+ D+D + K++ +E L L E ++
Sbjct: 683 ----SDVESWTTLYDRNMAVSEGKVVPNAGVEPDFDVSLSKMRALEEELDAVLSEYKRSF 738
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
+ I Y GK+LY +E+P S+ SVP ++ + K RY++P ++KL +++A
Sbjct: 739 KCSKIQYKDSGKELYTIELPISIAKSVPSNWTQLGANKSTKRYYSPKVQKLARSMAEARE 798
Query: 928 EKESALKSILQRLIGQFCEHHN-KWRQMVAATAGLTLIL 965
+ + + RL +F ++ + W + A + + IL
Sbjct: 799 LHKILEEGLKGRLYQKFDQNFSTTWFPTIKAISNIDCIL 837
>gi|401626342|gb|EJS44294.1| msh6p [Saccharomyces arboricola H-6]
Length = 1247
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 206/704 (29%), Positives = 351/704 (49%), Gaps = 79/704 (11%)
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
S +F+ + +++ +L D RDA+RR D YD RTLY+P + +KQ+WE KSK
Sbjct: 271 SSKFNKQNEERYQWL-VDERDAQRRPKNDPEYDQRTLYIPSSAWNKFTPFEKQYWEIKSK 329
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARK 397
D ++FFK GKF+EL+E DA + DL+ G + + G PE +F + +
Sbjct: 330 MWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWASQFIQM 389
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++ A+Y +A
Sbjct: 390 GYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL-ATYCLA 444
Query: 458 LTES-----NQSP------ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ E NQ+ A + + FG +D AT + + + DD +C+ L L+S+
Sbjct: 445 IREEPGNYYNQTELDSVTMAKKLNTKIFGAAFIDTATGELRMLEFEDDSECTKLDTLMSQ 504
Query: 507 LRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+RP+E++ N LS + + N + N++ EF+D++ T EI I++E
Sbjct: 505 VRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKGGGEFYDSDKTYSEI------ISSE 558
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
E D P +L TG SA GG L+YLK LDE+L+
Sbjct: 559 YF----------PTEAD----WPDVLKNYHETGKKVG--FSAFGGLLYYLKWLKLDESLI 602
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
E + + + M+LD L+NLE+F NS G GTL+ N +T GK
Sbjct: 603 SMKNIE-----EYNFVKSQNSMILDGITLQNLEIFSNSFDGSDKGTLFKLFNRAITPMGK 657
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFAS 743
R+++ WL PL + I R D+V L Q AL E S+LPD+ER+LAR+ +
Sbjct: 658 RMMKKWLMHPLLHKDDIENRLDSVDSLL---QDIALREELEMTFSKLPDLERMLARIHSR 714
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL-GAILENTESRQLHHILT 802
+ ++++F + E + Q SSL L+ S+ +
Sbjct: 715 T------------------IKVKDFEKVITAFETIVQLQSSLEDNALKGDVSKYVSSF-- 754
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P + +V ++++ +AF +A + I+P G D+++D + K++E+E L + L
Sbjct: 755 PKE----LVECVENWTNAFQRQKAIDENIIVPQRGFDIEFDKSLDKIQELEDKLMEILMS 810
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
RK ++I Y GK++Y +E+P S+ +VP ++ ++ K + RY++ ++ L +
Sbjct: 811 YRKQFKCSNIQYKDSGKEIYTVEIPVSVTKNVPSNWIQMAANKSYKRYYSDEVRALARSM 870
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 871 AEAKELHKTLEEDLKNRLCQKFDAHYNSIWMPTIQAISNIDCLL 914
>gi|151942085|gb|EDN60441.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
Length = 1242
Score = 279 bits (714), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 206/711 (28%), Positives = 348/711 (48%), Gaps = 81/711 (11%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+ L +++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLL 909
>gi|398365559|ref|NP_010382.3| mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288c]
gi|3024187|sp|Q03834.1|MSH6_YEAST RecName: Full=DNA mismatch repair protein MSH6; AltName: Full=MutS
protein homolog 6; AltName: Full=Postmeiotic segregation
protein 3
gi|633631|emb|CAA87671.1| probable DNA repair protein [Saccharomyces cerevisiae]
gi|285811118|tpg|DAA11942.1| TPA: mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288c]
Length = 1242
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 206/711 (28%), Positives = 348/711 (48%), Gaps = 81/711 (11%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+ L +++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLL 909
>gi|256269843|gb|EEU05102.1| Msh6p [Saccharomyces cerevisiae JAY291]
Length = 1242
Score = 278 bits (712), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 206/711 (28%), Positives = 348/711 (48%), Gaps = 81/711 (11%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+ L +++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWIPTIQAISNIDCLL 909
>gi|255718761|ref|XP_002555661.1| KLTH0G14476p [Lachancea thermotolerans]
gi|238937045|emb|CAR25224.1| KLTH0G14476p [Lachancea thermotolerans CBS 6340]
Length = 1276
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 209/704 (29%), Positives = 341/704 (48%), Gaps = 85/704 (12%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L RDA+ R D YD RTL++P + +KQ+WE KS+ D
Sbjct: 305 FNKENEERYQWL-VHERDAQGRSKEDPDYDSRTLFIPSSAWSKFTPFEKQYWEIKSRMWD 363
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DA +G + DL+ G + + G PE +F + + GY+
Sbjct: 364 CIVFFKKGKFFELYEKDALLGNQLFDLKIAGGGRANMQLAGIPEMSFDYWAMQFIQHGYK 423
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-- 458
V V+Q E+ E+R KG +VKRE+ V+T GTLT+ +L ++ A++ +A+
Sbjct: 424 VAKVDQRESMLAKEMREGNKG----IVKRELQHVLTSGTLTDSGMLQSD-QATFCLAIKE 478
Query: 459 -------TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
TE+ S++ + FG+ +D AT I L + DD +CS L L+S+++P E
Sbjct: 479 EAGTYHDTENGTVEPSKTESKIFGVAFIDTATGEIELLEFEDDSECSKLDTLMSQVKPKE 538
Query: 512 IIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
II N L + I++ P + N L P+ EF+D T E+ + + A+
Sbjct: 539 IIMEKNNLCNLAHK-IVKFNAQPQAIFNYLKPVEEFYDFNKTFDELTSTETKYFAD---- 593
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
+ P +L+ G SA GG L YLK LDE ++
Sbjct: 594 --------------MEHWPAVLTHYFEKGKKVG--FSAFGGLLSYLKWLKLDEAMITMGN 637
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
+ + + + +VLD L+NLE+F NS GTL+ LN +T GKR+L+
Sbjct: 638 IK-----EYNPIRSQNSLVLDGVTLQNLEIFCNSFDNSDRGTLFKLLNRAITPMGKRMLK 692
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL----SRLPDMERLLARLFASSE 745
W+ PL I R D+V L +E R+ L S LPD+ER LAR+ + +
Sbjct: 693 KWVVHPLLQKKDIEMRLDSVDLLLT-----KIEIREVLEDKLSLLPDLERFLARVHSGA- 746
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE---SRQLHHILT 802
++++F + G E + + L A L+N E S Q+
Sbjct: 747 -----------------LKIKDFNRVIEGFE----SITGLIAKLQNFELTGSLQVFLNQI 785
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P A+ ++ + AFD +A N G IIP GV+ ++D + + +K++E L HL+E
Sbjct: 786 P----EALSEKVEGWVGAFDRKKAVNDGVIIPERGVEPEFDRSLQGIKDLEDELDGHLRE 841
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+K ++I + GK++Y +EVP S +P D+ + K RY++P + KL +
Sbjct: 842 YKKQFKCSNIQFKDSGKEIYTIEVPMSATKQIPSDWIQMGANKSNKRYYSPGVAKLARSM 901
Query: 923 SQAESEKESALKSILQRLIGQFCEHH-NKWRQMVAATAGLTLIL 965
++A +S +S+ RL +F H+ + W + A A + IL
Sbjct: 902 AEAREMHKSLEESLKSRLYKKFDLHYQDVWMPTLLAVARMDCIL 945
>gi|388579806|gb|EIM20126.1| DNA mismatch repair protein Msh6 [Wallemia sebi CBS 633.66]
Length = 1017
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 207/686 (30%), Positives = 331/686 (48%), Gaps = 70/686 (10%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL P D + G YDP TL++PP + + S +KQ+WE K+ H D ++FF+ G
Sbjct: 85 FMFLHPPY-DKYQNPIGHPDYDPHTLHIPPKYWKEFSPFEKQFWEIKADHFDTILFFQKG 143
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYEL+E DA +G +E DL+ + G PE +F K GY+V VEQ ET
Sbjct: 144 KFYELYENDAIIGHREFDLKLTERVRMCMVGVPEMSFDFFAAKFLALGYKVGKVEQRETA 203
Query: 411 EQLELRR----------KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
+++R+ K S DK+V+RE+ +V+T GTL + ++L A+ AS+ +++ E
Sbjct: 204 IGMDMRQRADKKPAGGAKAGKSDDKLVRRELRSVLTNGTLVDPKML-ADEAASHCVSIKE 262
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
++ S FG+C++D +T L DD S L L+ +LRP EI+ L
Sbjct: 263 TSSS--INGNKPTFGLCILDASTGEFNLATFEDDKSRSKLETLIRQLRPKEIVHEKGNLD 320
Query: 521 PETERAILRHTR-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
T R + T + L L E DA T+ E+KN++N+ + D++
Sbjct: 321 QLTLRVLRNITSISCLWTSLNSGKEGMDAIETITELKNLFNK------DNEDADKVK--- 371
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
LP + LI ++ + +LG ++YL+ LD LL F + + G
Sbjct: 372 -------LPDAIESLI----ENTEAIESLGNLMWYLRSLNLDRDLLSLGNFNIYDATREG 420
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
M+LD L ++EV NS G+ TL LN C T FGKRL R WL PL +S
Sbjct: 421 QA-----MILDGRTLAHIEVLVNSEGGEDD-TLLKLLNRCTTPFGKRLFRIWLCTPLRSS 474
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I ER +AV + N F EF + LPD+ERLL+R+ A S
Sbjct: 475 KAINERLNAVDDVIS-NTGFTQEFDSNVKGLPDLERLLSRIHAMS--------------- 518
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
+ ++F+ L + Q L +S+ L L + +P + + + +
Sbjct: 519 ---VRPKQFLQVLEAFNRLQQVFEKLEEEASEFKSQSLKATL---RSIPDLREYISNIES 572
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG- 878
FD E + ++P G D Y+ A K +++E L + L+ ++ +I+Y +G
Sbjct: 573 KFDLTENDT---LMPCDGADEAYEDAKKLNEDLEQELDEILERYKREFKIKTISYKDVGT 629
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K++Y +E+P+ + SVP ++ SS + RYW+P +++L+ ++ +A + SAL +
Sbjct: 630 KEIYSIEMPK--KTSVPANWAKLSSTQKVDRYWSPEVRQLVQKVKEARETRASALNDFAK 687
Query: 939 RLIGQFCEHHNKWRQMVAATAGLTLI 964
+L F E + W V A A + I
Sbjct: 688 KLYAAFDEDYKTWIAAVKACAEIDCI 713
>gi|156837100|ref|XP_001642584.1| hypothetical protein Kpol_1075p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113131|gb|EDO14726.1| hypothetical protein Kpol_1075p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 1251
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 205/707 (28%), Positives = 345/707 (48%), Gaps = 89/707 (12%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ +++ +L D RDA++R D YDPRTLY+P + +KQ+WE KSK D
Sbjct: 277 FNKENEERYQWL-VDIRDAQKRPISDPEYDPRTLYIPSSAWNKFTAFEKQYWEIKSKMWD 335
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKF+EL+E DA +G DL+ G + + G PE +F + + GY+
Sbjct: 336 CVVFFKKGKFFELYEKDAMLGNSLFDLKIAGGGRANMQLAGIPEMSFDYWSSQFIQYGYK 395
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-- 458
V V+Q E+ E+R KG +VKRE+ V+T GTLT+G +L ++ A+Y MA+
Sbjct: 396 VAKVDQRESMLAKEMREGSKG----IVKRELECVLTSGTLTDGSMLHSDL-ATYCMAIRE 450
Query: 459 ---------TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
E+ S + + FG+ +D AT + + + DD +CS L+S+++P
Sbjct: 451 EPGNYYTCNDENIVSIEETMSKKIFGVAFIDTATGELQMLEFEDDKECSKFDTLMSQIKP 510
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
E+I N LS ++ I++ +P + N + P +EF+D ++R T + L
Sbjct: 511 KEVIMEKNNLSNLAQK-IVKFNSSPQAIFNYMKPGTEFYD-----------FHR-TYDEL 557
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLR 626
K ++ Q+E P IL + ++G QV SA GG L YLK LD +L+
Sbjct: 558 LKPENAYFEEQSE------WPTILQKYY---NNGKQVGFSAFGGLLNYLKWLKLDSSLIS 608
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ + + + M+LD L+NLE+F N+ G GTL+ N +T GKR
Sbjct: 609 LGNMK-----EYNLIKSQHSMILDGVTLQNLEIFSNTFDGSDKGTLFKLFNRAITPMGKR 663
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSE 745
+RTW+ PL + I +R D+V L ++ P + F LS++PD+ERLL+R+ A +
Sbjct: 664 TMRTWVMHPLLHKADIDKRLDSVEQL--LDDPVLRDLFESHLSKIPDLERLLSRIHAGT- 720
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++++F + G E ++ +L ++ + L G
Sbjct: 721 -----------------VKMKDFDKVIQGFE-------TIVKLLTKISNQNFNGAL--GV 754
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRII------PHGGVDMDYDSACKKVKEIEASLTKH 859
+ I L F+D W A + + I PH GV+ ++D + K+K IE L H
Sbjct: 755 FVSQIPESL--FQDVAKWTNAFDREKAIVEDVMEPHSGVEPEFDESLDKIKGIEEDLNDH 812
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
L+ +K ++I + GK++Y +EVP + +P + + K RY++ + KL
Sbjct: 813 LRRYKKEFKCSTIHFKDSGKEIYTIEVPMAATKLIPSSWMQMGANKSSKRYYSEEVSKLA 872
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHH-NKWRQMVAATAGLTLIL 965
+++A + + + RL +F H+ W + A + + ++
Sbjct: 873 RSMAEARESHKIIEQDLKNRLSKKFHSHYKTSWMPTIEAISKIDCLI 919
>gi|50288573|ref|XP_446716.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526024|emb|CAG59643.1| unnamed protein product [Candida glabrata]
Length = 1216
Score = 277 bits (708), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 215/711 (30%), Positives = 352/711 (49%), Gaps = 78/711 (10%)
Query: 272 FDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQ 331
F G + F+ + +++ +L D RDA++R D YDPRTLY+P + +
Sbjct: 234 FTMATTGPKNNTFNKQNEERYQWL-VDERDAQKRPKDDPEYDPRTLYIPSSAWNKFTPFE 292
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFS 388
KQ+WE KSK D ++FFK GKF+EL+E DA + D + G + + G PE +F
Sbjct: 293 KQYWEIKSKMWDCIVFFKKGKFFELYEKDAFLANALFDWKLAGGGRANMQLAGIPEMSFE 352
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSA 448
+ + GY+V V+Q E+ E+R KG +VKRE+ V+T GTL +G+++ +
Sbjct: 353 HWASQFIQLGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCVLTSGTLVDGDMIHS 408
Query: 449 NPDASYLMALTE--SN----QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ A+Y +A+ E SN P+S + + FG+ +D +T + + + +DD +CS L
Sbjct: 409 DL-ATYCLAVREEPSNFYDITQPSSATYTKIFGVAFIDTSTGEVQMTEFLDDEECSRLDT 467
Query: 503 LLSELRPVE-IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
L+S++RP E II+ N+ + + N L N + P+ EF+D E T E+
Sbjct: 468 LMSQVRPKEVIIEKHNLCNLANKIVKFCAAPNALFNYIKPVEEFYDFEKTHNEL------ 521
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFL 620
+AN +A P +L DS +V SA GG L+YLK L
Sbjct: 522 ------------LANEEAYFGTADGWPSVLKNYY---DSNKKVGFSAFGGLLYYLKWLKL 566
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
DE+L+ F + + + + MVLD +L+NLE+F NS G GTL+ N+ +
Sbjct: 567 DESLISMKNF-----TEYNFVKSQNTMVLDGISLQNLEIFSNSFDGSDKGTLFKLFNNSI 621
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T GKR++R WL PL I +RQD+V L N + + LPD+ERLL+R+
Sbjct: 622 TPMGKRMMRKWLMNPLLLKEDIEKRQDSVELLMN-NHELRTKIESVFTGLPDLERLLSRI 680
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT---ESRQL 797
A S ++++F D+ ++ IL+ T ES +L
Sbjct: 681 HAGS------------------LKVKDF----------DKVITAFENILQMTKEIESNEL 712
Query: 798 HHIL-TPGKGLP-AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
H L + +P + + ++H++ AFD +A G IIP GV+ D+D + +K++ +E
Sbjct: 713 HGALKSYFIQIPKQLENEVQHWESAFDRRKAVEEGVIIPEVGVEPDFDKSLEKLEGLENE 772
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L LK KLL +++ Y GK++Y +EVP S VP ++ + K RY++ +
Sbjct: 773 LNLLLKSYMKLLKTSNLQYKDSGKEIYTIEVPVSATKYVPANWVQMGANKNTKRYYSDEV 832
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQF-CEHHNKWRQMVAATAGLTLIL 965
+ L +++A ++ + RL +F ++ W V A + +L
Sbjct: 833 RVLARSVAEARELHKTLENDLNFRLCRKFDTQYSTVWMPTVTCLANIDCLL 883
>gi|68467217|ref|XP_722270.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
gi|68467446|ref|XP_722156.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444105|gb|EAL03382.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444229|gb|EAL03505.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
Length = 1214
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 199/690 (28%), Positives = 344/690 (49%), Gaps = 64/690 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F +++ +L D RDA++R YDPRTLY+P + +KQ+W+ KSK +
Sbjct: 273 FEKENEERYQWL-VDIRDAEKRPIDHPDYDPRTLYIPQSAWSKFTAFEKQYWQIKSKMWN 331
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FF+ GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 332 TVVFFQKGKFYELYENDAVIANTQFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 391
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V VEQ E+ ++R ++K+++RE+ ++T GTLT +++S N A+Y +++ E
Sbjct: 392 VAKVEQKESMLVKQMRGGAT-KEEKIIERELKGILTAGTLTNLDMIS-NDMATYCLSIKE 449
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANML 519
++ +++ FG+ VD ATS + ++ DD +C+ L L++++ P EII + N+
Sbjct: 450 EDKEDGTKT----FGVAFVDTATSELNFIELDDDAECTKLDTLITQINPKEIICEKGNLC 505
Query: 520 SPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
T+ IL+ H+ + + N L P++EFWD + I E L KA A
Sbjct: 506 QIATK--ILKFCTHSDHQIWNALNPITEFWDYD------------IALEQLVKAKYYDAE 551
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P +L + ++ +A GG L+YLK LD +++ S
Sbjct: 552 NL---DDYSNYPKVLVDF---KENHQVAFNAFGGLLYYLKMLKLDTSIMSLGNIHEYHIS 605
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+M+LD L NLE+ N+ G + GTL+ +N T+FGKR L+ W+ PL
Sbjct: 606 ----RNSASHMILDGVTLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPL 661
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I +R D+V L + L+ +PD+ERLLAR+ +
Sbjct: 662 FKVDEINQRYDSVDYLMNDGLELRSILQDTLANIPDLERLLARVHGGT------------ 709
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVSILK 815
+ ++F+ + E + S L N ES L+ L K P + +++
Sbjct: 710 ------LKFRDFLKVIESFESIAGVSSKL-VDFTNVESGMLYKYL---KSFPHEMRELIQ 759
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
++DAFD +A N I+P G D ++D++ +++++ L K LKE ++ I Y
Sbjct: 760 QWEDAFDREQAKND-IIVPSAGTDEEFDNSQASMEDLKTQLDKLLKEYKRTYKSQEICYR 818
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
GK++YL+EVP L+ VP D++ S RY++P ++ L EL + + +
Sbjct: 819 DSGKEIYLIEVPFKLK--VPGDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMVCDT 876
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ R+ +F +H+N W Q++ A + +L
Sbjct: 877 LKIRMYEKFDKHYNVWMQVIQTIANIDCLL 906
>gi|238878303|gb|EEQ41941.1| hypothetical protein CAWG_00132 [Candida albicans WO-1]
Length = 1214
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 199/690 (28%), Positives = 344/690 (49%), Gaps = 64/690 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F +++ +L D RDA++R YDPRTLY+P + +KQ+W+ KSK +
Sbjct: 273 FEKENEERYQWL-VDIRDAEKRPIDHPDYDPRTLYIPQSAWSKFTAFEKQYWQIKSKMWN 331
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FF+ GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 332 TVVFFQKGKFYELYENDAVIANTQFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 391
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V VEQ E+ ++R ++K+++RE+ ++T GTLT +++S N A+Y +++ E
Sbjct: 392 VAKVEQKESMLVKQMRGGAT-KEEKIIERELKGILTAGTLTNLDMIS-NDMATYCLSIKE 449
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANML 519
++ +++ FG+ VD ATS + ++ DD +C+ L L++++ P EII + N+
Sbjct: 450 EDKEDGTKT----FGVAFVDTATSELNFIELDDDAECTKLDTLITQINPKEIICEKGNLC 505
Query: 520 SPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
T+ IL+ H+ + + N L P++EFWD + I E L KA A
Sbjct: 506 QIATK--ILKFCTHSDHQIWNALNPITEFWDYD------------IALEQLVKAKYYDAE 551
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P +L + ++ +A GG L+YLK LD +++ S
Sbjct: 552 NL---DDYSNYPKVLVDF---KENHQVAFNAFGGLLYYLKMLKLDTSIMSLGNIHEYHIS 605
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+M+LD L NLE+ N+ G + GTL+ +N T+FGKR L+ W+ PL
Sbjct: 606 ----RNSASHMILDGVTLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPL 661
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I +R D+V L + L+ +PD+ERLLAR+ +
Sbjct: 662 FKVDEINQRYDSVDYLMNDGLELRSILQDTLANIPDLERLLARVHGGT------------ 709
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVSILK 815
+ ++F+ + E + S L N ES L+ L K P + +++
Sbjct: 710 ------LKFRDFLKVIESFESIAGVSSKL-VDFTNVESGMLYKYL---KSFPHEMRELIQ 759
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
++DAFD +A N I+P G D ++D++ +++++ L K LKE ++ I Y
Sbjct: 760 QWEDAFDREQAKND-IIVPSAGTDEEFDNSQASMEDLKTQLDKLLKEYKRTYKSQEICYR 818
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
GK++YL+EVP L+ VP D++ S RY++P ++ L EL + + +
Sbjct: 819 DSGKEIYLIEVPFKLK--VPGDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMVCDT 876
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ R+ +F +H+N W Q++ A + +L
Sbjct: 877 LKIRMYEKFDKHYNVWMQVIQTIANIDCLL 906
>gi|392300210|gb|EIW11301.1| Msh6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1242
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 205/711 (28%), Positives = 347/711 (48%), Gaps = 81/711 (11%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LA + S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLAGIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+ L +++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLL 909
>gi|426195177|gb|EKV45107.1| hypothetical protein AGABI2DRAFT_207943 [Agaricus bisporus var.
bisporus H97]
Length = 1263
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 208/713 (29%), Positives = 351/713 (49%), Gaps = 69/713 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D + FL D +D +RPG+ YDPRTL++P + + +KQ+WE K H D V+FF+
Sbjct: 300 DPYAFL-QDVKDKDGKRPGEPGYDPRTLHIPSSAWKEFTPFEKQFWEIKQNHYDTVLFFQ 358
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF+EL+E DA +G +E DL+ + + G PE + K KGY+V V+Q+E
Sbjct: 359 KGKFFELYEDDARIGHQEFDLKLTSRVKMSMVGVPEMSLDFWTAKFLGKGYKVGRVDQSE 418
Query: 409 TPEQLELRRKEKG------SKDKVV-KREICAVVTKGTLTEGELLSANPDASYLMALTES 461
T E+R K KG +KDK+V +RE+ V T GTL + ELL + +A + +A+TE
Sbjct: 419 TALGAEMRNKSKGKASEDKAKDKIVRRRELNKVYTNGTLVDPELL-IDDNAGHCVAITE- 476
Query: 462 NQSPASQSTD--RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
P+ D FGICV+D +TS+ L DD+ + L L+ ++RP E++ L
Sbjct: 477 --EPSEDGKDLQNKFGICVLDCSTSQFNLSAFEDDVCRTKLETLMRQIRPKELLFKKGSL 534
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S T R ++ ++P + W T++ ++ T E L K +
Sbjct: 535 SVSTTR---------MLKMILPTNVLW---TSLRTVEGFDYDQTMEQL-KTLFPPGDEDM 581
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
E DG LP + E I S + + +LG ++YL++ +D+ ++ F + +
Sbjct: 582 EADGDDALPASVPESIREMASYPKAIESLGCMIWYLRQLNIDKEIISMKNFNV-----YD 636
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
M + + L+ +L +LE+ N+ G G+L LN C+T+FGKRL R WL PL N
Sbjct: 637 PMKRGQGLTLEGQSLAHLEILINNE-GTEDGSLLKLLNRCITSFGKRLFRIWLCMPLRNV 695
Query: 700 GLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
I R DAV + +N P F +F + LPD+ER+++R+ A++
Sbjct: 696 VDINARLDAVEDI--MNHPTFEADFVEIAKGLPDLERIVSRIHANN-------------- 739
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
++++F+ L + + + L E +S+ + +L +G P ++ +KH +
Sbjct: 740 ----CKIKDFLKVLASFRKLSRGLNKLADESEGFKSKTILGLL---RGAPNLIPHVKHIE 792
Query: 819 DAFDWVEANN--SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY-- 874
+ F + + S ++P G D +YD+ ++ +E L + L E +G +TY
Sbjct: 793 EMFQRPDPSGKASDELLPQKGKDEEYDAIVAEINGVEGKLEEALSELEDHVG-FKLTYWH 851
Query: 875 -VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
T KD+YL+E ++ P + S K RY P+++ + +L +A + +A+
Sbjct: 852 SATGHKDIYLVET--TVAKKAPSTWTKHSGTKAKNRYVVPSLQSKIRQLKEARENRTTAI 909
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
KS RL +F + + W + + A L + SL + ++ S SC E
Sbjct: 910 KSFKSRLFAEFDQDRSVWLRSIRVFAELDCLF---SLAKSSTVIGSPSCRPEF 959
>gi|349577164|dbj|GAA22333.1| K7_Msh6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1242
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 205/711 (28%), Positives = 347/711 (48%), Gaps = 81/711 (11%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LA + S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLAGIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+ L +++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLL 909
>gi|319411719|emb|CBQ73763.1| related to MSH6-DNA mismatch repair protein (N-terminal fragment)
[Sporisorium reilianum SRZ2]
Length = 1279
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 217/704 (30%), Positives = 335/704 (47%), Gaps = 74/704 (10%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D RD RPGDV YD RT+Y+P ++ + +KQ+WE K H D V+FF+ GKFYEL+
Sbjct: 350 DLRDKDGNRPGDVEYDSRTVYIPKSAWKDFTPFEKQFWEIKQNHWDTVLFFQKGKFYELY 409
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G +E DL+ + + G PE +F + K GY+V V+QTET +R
Sbjct: 410 EEDALIGHREFDLKLTDRVKMKMVGVPEASFDIFAAKFLALGYKVGRVDQTETAVAKGMR 469
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESNQSPASQSTDR 472
+ +G ++V RE+ V+T GT+ + L PD SY +++ E+ +P
Sbjct: 470 VGERSRGGGSEIVNRELRHVLTSGTIVDAASL---PDDLNSYCVSIKEA-ATPGRNGP-- 523
Query: 473 CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT- 531
FG+C +D AT+ L + DD + L LL LR E++ LS T R +LR T
Sbjct: 524 IFGVCTLDAATAEFNLTEFEDDESRTRLETLLRSLRLKEVLHEKGGLSAPTLR-VLRSTV 582
Query: 532 -RNPLVNDLVPLSEFWDAETTVLEIKNIYN-----RITAESLNKADSNVANSQAEGDGLT 585
L P EF + ETT+ ++ ++N ESL+ D
Sbjct: 583 PSTAQTTMLKPGVEFLEPETTLRKLNALFNPNVDAEARLESLDPVD-------------- 628
Query: 586 CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP 645
P +L E I++ +SALGG L YL + LD L F + F + +
Sbjct: 629 --PSLLPEGIASMVDRPGAMSALGGMLCYLAQLNLDRDLCSSRNFNI-----FDPLRQDK 681
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
+VLDA +L +L V +N G GTL+ LN CVT GKRL + WL PL + IR R
Sbjct: 682 CLVLDAQSLTHLNVLQNDE-GTDEGTLHRLLNRCVTPSGKRLFKIWLVAPLATADAIRAR 740
Query: 706 QDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQL 765
QDAV L N F EF LPD+ER++ R+ A K +
Sbjct: 741 QDAVEDLLK-NPCFGDEFETFGKALPDIERIVPRV------------------RAGKCRP 781
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVE 825
++F + L ++A L + ++ E+ + +L + +PA+ ++ + + +F E
Sbjct: 782 RDFTAVLKSLARFEKAVKQLRSQCQSFETEVIDALL---QSIPAVSTMARELQSSFKVTE 838
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS--ITYVTIG-KDLY 882
G P G YD A + E+EA L ++ RK L T+ + +G KD++
Sbjct: 839 ---DGSFHPIEGAFEPYDRAETAIAEVEAQLEHEIETYRKQLKLTASKCAWKHLGTKDIF 895
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EVP + + VP ++ S K R+++P ++ L+ ++ +A + +ALK Q L
Sbjct: 896 QVEVPVATK--VPSNWTKLSGTKDRNRWYSPKVRDLVQDIKEARETRLAALKQFHQSLFA 953
Query: 943 QFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
F E + + Q V A + +L SL A + SC E+
Sbjct: 954 SFSEQSDVFLQAVKTVAEIDCLL---SLAKASYAIGEPSCRPEL 994
>gi|363751194|ref|XP_003645814.1| hypothetical protein Ecym_3519 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889448|gb|AET38997.1| Hypothetical protein Ecym_3519 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1233
Score = 276 bits (705), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 200/709 (28%), Positives = 338/709 (47%), Gaps = 86/709 (12%)
Query: 279 DVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFK 338
D F+ ++ +L + RDA +P D YDPR+LY+PP+ + +KQ+W+ K
Sbjct: 259 DKHTNFNKNNEQRYQWL-VNERDAAGHQPSDSDYDPRSLYVPPEAWAKFTPFEKQYWQIK 317
Query: 339 SKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLA 395
SK D ++FFK GKF+EL+E DAH+ + DL+ G + + G PE +F +
Sbjct: 318 SKMWDCIVFFKKGKFFELYEKDAHLANQLFDLKIAGGGRANMQLAGIPEMSFEYWASQFI 377
Query: 396 RKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
+ GY+V V+Q E+ E+R KG +V+RE+ V+T GTLTE +L + A+Y
Sbjct: 378 QNGYKVAKVDQKESMLAKEMREGNKG----IVERELQCVLTSGTLTESGMLQTDL-ATYC 432
Query: 456 MALTE-----------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
MA+ E ++ S ST + FG+ ++D AT I + + DD +CS L L+
Sbjct: 433 MAIREEPIDYYNLDCHNHSSTEKNSTGKYFGVSIIDTATGHIKMLEFEDDNECSQLDTLV 492
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
++++P E+I LS + + + + + + EF+D T EI +T
Sbjct: 493 AQVKPKEVIIERKNLSTLAHKIVKFNVQPDAIFNYRTPEEFYDFNRTYDEI------VTH 546
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+S P +L E + G A GG L YL+ LD +L
Sbjct: 547 GYFPNMES--------------WPQVLQEYYNKGKKVG--FHAFGGLLSYLQWLKLDLSL 590
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ + E + + ++ LD L+NLE+F NS G GTL+ LNH +T G
Sbjct: 591 VTMGQIE-----QYDHTKSQGFLCLDGITLQNLEIFANSFDGSDKGTLFKLLNHAITPMG 645
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGL------RGVNQPFALEFRKALSRLPDMERLLA 738
KR +R W+ PL N I ER D+V L RG+ A LPD+ERLL+
Sbjct: 646 KRAIRNWVMHPLLNKQHIDERLDSVDQLLSDMDIRGI-------IESAFIGLPDLERLLS 698
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQL 797
R+ +SN + ++ EF + G E + + L L+ + + L
Sbjct: 699 RI---------HSNTL---------KISEFDKVITGFETVSKLVQDLNKYELKGSLLKFL 740
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
I +G + + +D +A + G +IP+ GV+ ++D + ++ E+E +
Sbjct: 741 KEIPITLEG------DINTWNKVYDRNKAVHEGALIPNKGVEQEFDKSIDRINELENEFS 794
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
L+E +K L +SI Y GK++Y +E+P S+ +VP ++ S K RY++P ++K
Sbjct: 795 SMLREYKKELKCSSIQYKDSGKEIYTIEIPISVCKNVPSNWTQMGSNKSTKRYYSPTVQK 854
Query: 918 LLGELSQAESEKESALKSILQRLIGQF-CEHHNKWRQMVAATAGLTLIL 965
+ +++A + + + +L +F ++ W + + + + IL
Sbjct: 855 MARAMAEAREHHKILEEGLKGKLYQKFDMKYSTVWLPTIRSISNIDCIL 903
>gi|388851859|emb|CCF54453.1| related to MSH6-DNA mismatch repair protein [Ustilago hordei]
Length = 1313
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 218/720 (30%), Positives = 347/720 (48%), Gaps = 75/720 (10%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+R A + + FL D RD RPGD YD RT+Y+P ++ + ++Q+W K H
Sbjct: 341 KRKKAANEEAYSFLV-DLRDKDGNRPGDGEYDSRTVYIPKSAWKDFTPFEEQFWRIKQNH 399
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D V+FF+ GKFYEL+E DA +G +E DL+ + + G PE +F + K GY+
Sbjct: 400 WDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVPEASFDIFAAKFLALGYK 459
Query: 401 VLVVEQTETPEQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLM 456
V V+QTET +R + +G ++V RE+ V+T GT+ + L PD SY +
Sbjct: 460 VGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIVDAASL---PDDLNSYCV 516
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
++ ES+++ + FG+C +D AT+ L + DD + L LL LR E++
Sbjct: 517 SIKESSEAGRNGP---IFGVCTLDAATAEFNLTEFEDDESRTRLETLLRSLRLKEVLHEK 573
Query: 517 NMLSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYN-----RITAESLNK 569
LS T R +L+ T + L P EF++ +TT+ ++ ++N ESL+
Sbjct: 574 AGLSAPTLR-VLQSTVPTTAQITMLKPGVEFFEPDTTLRKLNALFNPEVDADARVESLDP 632
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D P +L E I++ +SALGG L YL + LD L
Sbjct: 633 VD----------------PSLLPEGIASMVDKPCGMSALGGMLCYLAQLNLDRDLCSSRN 676
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + F + + +VL+A +L +L V +N G GTL+ LN CVT FGKRL +
Sbjct: 677 FNI-----FDPLRQDKCLVLNAQSLTHLNVLQNDE-GTDEGTLHRLLNRCVTPFGKRLFK 730
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
WL PL + IR RQDAV L NQ F EF LPD+ER++ R+
Sbjct: 731 IWLVAPLAAADAIRARQDAVEDLLK-NQGFGDEFETFGKALPDIERIVPRV--------- 780
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
A K + ++F + L ++A L A ++ E++ + +L + +P+
Sbjct: 781 ---------RAGKCRPRDFTAVLKAIACFEKAVRQLRAQCKDFETQVIDDLL---QSIPS 828
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ S+ + + +F E G P G YD A + E+EA L ++ R+ L
Sbjct: 829 VSSMARDLQSSFKVAE---DGSFTPIEGAFEPYDRAEVAIAEVEAQLESEIESYRQQLKL 885
Query: 870 TS--ITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
T+ + +G KD++ +EVP S + VP ++ S K R+++P ++ L+ ++ +A
Sbjct: 886 TAAKCAWKHLGTKDIFQIEVPISTK--VPSNWTKLSGTKDRNRWYSPKVRDLVQDIKEAR 943
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ +ALK Q L F E + + Q V A + +L SL A + SC E+
Sbjct: 944 ETRLAALKQFHQSLFASFSEKSDVFLQAVKTVAEIDCLL---SLAKASYAIGEPSCRPEL 1000
>gi|395324921|gb|EJF57352.1| DNA mismatch repair protein Msh6 [Dichomitus squalens LYAD-421 SS1]
Length = 1291
Score = 275 bits (704), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 211/712 (29%), Positives = 339/712 (47%), Gaps = 63/712 (8%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD RPG+ YDPRTLY+P + +KQ+WE K H D ++FF+
Sbjct: 328 DAFSFL-LDVRDKDGVRPGEPGYDPRTLYIPKSAWNEFTPFEKQFWEIKQNHFDTILFFQ 386
Query: 350 MGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF EL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q E
Sbjct: 387 KGKFLELYEEDARIGHQEFDLKLTQRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAE 446
Query: 409 TPEQLELR----RKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
T E+R +K K KDK+V+RE+ V T GTL + ELL+ + A + +++
Sbjct: 447 TALGAEMRLAADKKSKKPPAADKGKDKIVRRELNKVFTNGTLVDAELLT-DDQAGHCVSI 505
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
E + S+ + FGICV+D ATS L DD+ + L ++ +LRP EII
Sbjct: 506 RE-EEDAESKDGKQTFGICVLDSATSEFNLSAFEDDICRTKLETMMRQLRPKEIIFTKGN 564
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
LS T R L+ ++P + W T++ +++ + + T + L K +
Sbjct: 565 LSVSTTR---------LLKSILPGNCLW---TSLRDVEGLKFQDTIKELKKLYPASGDDD 612
Query: 579 AE-GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
E D L + E I + ALG ++YL +D+ +L F +
Sbjct: 613 DEMADNPHGLSSAVPEPIRRMLPHRAAIEALGSMIWYLNTLNIDKDILSMKNFNI----- 667
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
+ M + +VLD L ++EV +NS G GTL L+ C+T GKRL R WL PL
Sbjct: 668 YDPMRRGQGLVLDGQTLAHIEVLQNSE-GTEEGTLLKLLSRCITPSGKRLFRIWLCMPLR 726
Query: 698 NSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
I R DAV L ++ P F +F LPD+ER+++R+ A +
Sbjct: 727 EVKDINARLDAVQDL--LDHPTFEAQFASIAKGLPDLERIVSRIHAKN------------ 772
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
++++F+ L + + + + L + ES+ + +L + P + LKH
Sbjct: 773 ------CKVKDFLKVLTAFKNLSKGLAELADTADAFESKTISGLL---RTAPDLAPNLKH 823
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYV 875
K F E NS ++P G+D YD+ ++ E+E L LK RK G D + +
Sbjct: 824 VKSMFQTPE-ENSDELVPEDGMDEVYDTVMSEINELEDELKAELKTIRKKTGLDATYWHS 882
Query: 876 TIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK 934
G K++YL+++ + P+++ L S K R+ P+++ + +L +A + +A+K
Sbjct: 883 AQGTKEIYLVQLQGKEKDKAPKEWTLSGSTKNAKRFIIPSLQTTIRKLKEARENRNTAIK 942
Query: 935 SILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
RL +F + W + + + L + SL A L +C E+
Sbjct: 943 DFKNRLFAEFDADRSVWLRAIRVLSELDCLF---SLAKASSALGEPACRPEL 991
>gi|66827461|ref|XP_647085.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
gi|74897500|sp|Q55GU9.1|MSH6_DICDI RecName: Full=DNA mismatch repair protein Msh6
gi|60475825|gb|EAL73760.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
Length = 1260
Score = 275 bits (703), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 190/668 (28%), Positives = 331/668 (49%), Gaps = 65/668 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD RTL++P L S ++Q+W+ KSK+ D V+FFK GKFYEL+E DA +G ++L L+
Sbjct: 345 YDKRTLHIPASCLSKFSPFERQFWDIKSKNYDTVVFFKKGKFYELYESDADIGHQQLHLK 404
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVV 427
+ G PE +F+ KL G++V V+Q ET + R+ EKG KD ++
Sbjct: 405 LTDRVNMRMVGVPEMSFNHWASKLIHLGHKVAKVDQMETSIGMAKRQNEKGGRNKKDSII 464
Query: 428 KREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+RE+ +++T GTL + ++++ + ++YLMA+ E+ D+ +G+C VDV+
Sbjct: 465 QRELTSILTAGTLLDEQMIT-DQTSTYLMAIKENEY-------DKQYGVCFVDVSIGEFY 516
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR--HTRNPLVNDLVPLSEF 545
L + DD + LL ++ P EI+ SP+T + R T P++N + L E+
Sbjct: 517 LCTIQDDDNRMQFETLLLQMMPKEIVYEKGATSPKTISIMKRVLSTVKPVMNARLSL-EY 575
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
WD T+ I + T E+L + + ++
Sbjct: 576 WDPTDTMERITQLCGGKTPETLCQMKNE----------------------------EYLM 607
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
ALGG + YL + +++ A+F+ G+ M+LD L NLE+F NS
Sbjct: 608 GALGGCISYLMDIKIGNSVVEQARFKRFNPLDIGNS-----MILDGQCLVNLEIFNNSTD 662
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G + GTL+ ++ C TAFGKR+ R W+ RPL N I +RQ A+ LR + P L+
Sbjct: 663 GSTEGTLFKLMDRCTTAFGKRMFRQWICRPLANKNAIVDRQKAIEFLR--DSPETLQKVT 720
Query: 726 A-LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ-----EFISALH--GCEL 777
A L++LPD+ER++AR+ A + + + +++ K L+ E I ++H C
Sbjct: 721 AILNKLPDLERMIARIRAQTSKISDLISVLNHFDNIHSKLLELLDEAEQIESIHLRSCLF 780
Query: 778 MDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
MD + + + ++ G P + ++ + +F +E + R++P G
Sbjct: 781 MDNQQDNDDI---DEQENSNNNNNIRYSGYPNLKPYIERVRKSFT-IEQD---RVVPSKG 833
Query: 838 VDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
+ +++D ++ +E S KHL+EQ+ I Y +GK++Y +E+P + +P
Sbjct: 834 LFLEFDQCLGNIQSLEQSFAKHLEEQKAHFKCNKIEYKHMGKEIYQIEIPVAFTKKLPAG 893
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
+ L+SS RY +P + K L L + E K +L++++ F + N ++ +
Sbjct: 894 FSLKSSSSKVNRYHSPFVTKNLTSLLEERDTYEVLSKEVLKKILSNFAIYFNHFQIAITK 953
Query: 958 TAGLTLIL 965
+ L +L
Sbjct: 954 LSQLDCLL 961
>gi|70953875|ref|XP_746012.1| DNA repair protein [Plasmodium chabaudi chabaudi]
gi|56526506|emb|CAH77895.1| DNA repair protein, putative [Plasmodium chabaudi chabaudi]
Length = 1136
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 215/691 (31%), Positives = 336/691 (48%), Gaps = 80/691 (11%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD P + YD T++ PP + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 191 RDINLNTPDNPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 250
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 251 RFYEIFYIDACIMHTICGLNWMNGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 310
Query: 411 EQLELRRK-EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL----TESNQSP 465
++LE R K G KDK +KRE+ + TKGT+ +LSA + Y++ E
Sbjct: 311 KELEQRNKVSSGPKDKAIKREVNEIYTKGTILHDNMLSA--ETKYIICFHFDDIEDIGDD 368
Query: 466 ASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+ S C FG V DVATS I +G DD L LL++L P EI+ S
Sbjct: 369 NTGSQTHCNFGFVVSDVATSYIAVGYCNDDESRIELRTLLAQLCPAEIL----YCSKNVN 424
Query: 525 RAILRHTRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+ +L +N P +L ++ F + ++ E+ + E++ KA
Sbjct: 425 KEVLSIFKNIPACPELTSVNSFPNIIASLDEVNKYF-----ENIPKA------------- 466
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
+ + V+ A GG + YL+ LD+ LL+F K E F D+ K
Sbjct: 467 -----------LEAYKEQNSVICAFGGFIVYLRSLLLDKKLLKFCKIE------FYDLFK 509
Query: 644 KP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
K YMVLDA AL++LE+ E ++SG++ +LY +N T FG R +R W+ PL N I
Sbjct: 510 KDNYMVLDATALKHLEILE-TQSGETKNSLYDYVNKTCTNFGARNMRRWVCSPLLNCDKI 568
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK 762
+R D V LR + +L R L +LPD+ERLL ++ + + R + V +++
Sbjct: 569 NQRLDVVEFLRKNDHILSL-IRLKLKKLPDIERLLNKICIQASQSERGA---VFFDNIVN 624
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTE----SRQLHHILTPGKG--------LPAI 810
+L+EF++ L+ + +D + +I +N E +R T K P I
Sbjct: 625 TKLKEFVTFLNAFKEIDNMLIEINSI-DNEEDVIPTRLFEITNTYNKSSKNDIKGHYPEI 683
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
I F + + + P G D D+ KK K+IE L L + +K+L
Sbjct: 684 DQITNEF---LEKIYFDGEKEYKPAEGCDEAIDAINKKEKDIEKELNNILVDMKKVLKIP 740
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
++ +V K Y +E P+++ S ++ E+ S KKGF R IK L+ L E EK+
Sbjct: 741 TLKFVH-AKYKYEIECPDNVPKSFLKEVEITSVKKGFVRIQNEEIKNLVEMLEDIEQEKK 799
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
A+ Q++ F EH+ K+ A L
Sbjct: 800 DAIYPFFQKIFHLFYEHYEKYVSACRLIAEL 830
>gi|223998298|ref|XP_002288822.1| MutS family [Thalassiosira pseudonana CCMP1335]
gi|220975930|gb|EED94258.1| MutS family [Thalassiosira pseudonana CCMP1335]
Length = 1099
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 233/748 (31%), Positives = 341/748 (45%), Gaps = 112/748 (14%)
Query: 292 FH----FLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKS 339
FH F RRD + P Y PRTL + + L LS Q+QWW+ K
Sbjct: 115 FHNHLTFFTSGRRDMNKHAPNHPDYSPRTLLVDYNELERKHKEIGGTLSPAQRQWWDIKC 174
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGY 399
+ D V+ FK GKFYE+F DA VG LD YM G H GFPE + V L KGY
Sbjct: 175 HYADTVLLFKTGKFYEMFHDDADVGVAHLDFNYMSGTAAHAGFPEAAYDKFVGILVEKGY 234
Query: 400 RVLVVEQTETPEQLELRRKE-KGSKDKVVKREICAVVTKGTLT-----------EG--EL 445
+V VEQTETP+ L R+K G K VV RE+C VV+KGT T EG +
Sbjct: 235 KVARVEQTETPDMLNERKKRTSGKKPSVVNREVCCVVSKGTRTFCYLEDTSCFEEGSEKK 294
Query: 446 LSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
++ P L+ + E + + + C +G+ VVD T + LGQ DD+ S + LL
Sbjct: 295 VTTGP----LVVIKEVEEEDVAGTKAVCEYGVTVVDAITGVVTLGQFADDILRSRMQTLL 350
Query: 505 SELRPVEII--------KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI- 555
+ P E++ +N L E + + R +N + P WDAE V E+
Sbjct: 351 ASYSPSEVLIEGGAKNFPKSNALDSEARKVLNRTQQN-----ISP----WDAEDGVKELH 401
Query: 556 -KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
+ Y R + N ++ G G+ P +L + G S LS+ G LFY
Sbjct: 402 RRAYYPR-------SSRKNDPSAGGVGGGIGRWPEVLRACVDGG--ASLALSSFGAALFY 452
Query: 615 LKKSFLDETLLRFA--KFELLPCSGFGDMAKKP---YMVLDAPALENLEVFENSRSGDSS 669
L++S +D +L K + P +G + +M LD L NLE+ N SG
Sbjct: 453 LQRSLVDAEILSMGIVKAYIPPNNGLSPTESEALCDHMALDGTTLSNLEILNNLASGSYQ 512
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALS 728
G+L ++++ + G RLLR WL RPL+ I R D V L G + ++ E R L
Sbjct: 513 GSLLSKIDVTQSPHGSRLLRAWLLRPLFRKVDIDRRADVVEELSGGSAAVSMSEARPLLK 572
Query: 729 RLPDMERLLARLFASSEANGRNSN------------KVVLYEDA--AKKQLQEFISALHG 774
+ D+ERLL+R+ + + G ++ + +LYE+ K+++ +F L G
Sbjct: 573 KTGDIERLLSRVHSMGQGGGARADGEGPPTGYHPDERAILYENEKHTKRKVGDFSKLLTG 632
Query: 775 C-------ELMDQA---CSSLGAILENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDW 823
EL D A L I+ T++ G PA + L F D FD
Sbjct: 633 LRNAAEIPELFDNAEIQSPMLAKIVRTTDN---------GGCFPADMKEKLDWFFDNFDL 683
Query: 824 VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL---GDTSITYVTI--- 877
+A+ G P G+ DYD AC + I+ L + E + G + Y+ I
Sbjct: 684 KKASK-GEFEPTRGMSEDYDEACDTIVNIKRELEAYKDEMCSSVIRNGKSHWKYINIKED 742
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSK-KG---FFRYWTPNIKKLLGELSQAESEKESAL 933
KD YL+E+P ++ SVP D+EL++ + KG +Y TP + L+ EL +A K +
Sbjct: 743 SKDKYLIELPATV--SVPADFELKAKRGKGNNQVNKYRTPEVAGLVKELERAIDVKAAGK 800
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAGL 961
S ++ + +F N W ATA L
Sbjct: 801 ASGMKLVFAKFDSMRNVWMAATHATAML 828
>gi|1588283|prf||2208298A MSH6 gene
Length = 1242
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 205/711 (28%), Positives = 346/711 (48%), Gaps = 81/711 (11%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GK +EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKEFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I+ E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISEEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+ L +++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLL 909
>gi|50306061|ref|XP_452992.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642125|emb|CAH01843.1| KLLA0C17732p [Kluyveromyces lactis]
Length = 1194
Score = 273 bits (699), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 199/694 (28%), Positives = 337/694 (48%), Gaps = 68/694 (9%)
Query: 283 RFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
+F+ +++ +L +R DA+ R D YDPRTLY+P D + +KQ+WE KSK
Sbjct: 229 KFNKTNGERYQWLVHER-DAEGRDKSDPDYDPRTLYIPGDAWSKFTPFEKQYWEIKSKMW 287
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGY 399
D ++FFK GKF+EL+E DAH+G DL+ G + + G PE +F + + GY
Sbjct: 288 DCILFFKKGKFFELYEKDAHLGHHLFDLKIAGGGRANMQLAGVPEMSFDYWASQFIQYGY 347
Query: 400 RVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
+V V+Q E+ E+R KG +V+RE+ V+T GTLT+ E+L ++ A+Y +A+
Sbjct: 348 KVAKVDQKESMLAKEMREGSKG----IVERELQCVLTSGTLTDSEMLKSDL-ATYCVAVR 402
Query: 460 ES------NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
E + A T + FG +D AT I L + DD +CS L ++S+ +P E+I
Sbjct: 403 EEPITYYDEEILALPKTGKYFGFAAIDTATGHIDLLEFEDDEECSQLDTIMSQFKPTEVI 462
Query: 514 KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSN 573
+ + ++ I + + + + EF+D E T E+ IT E D
Sbjct: 463 MEKSNVCSLAQKIIKFNAQPEAIINQRTSKEFYDFEKTFDEL------ITHEYFKSMDR- 515
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
P +L TG A GG L YL+ LD +L+ + E
Sbjct: 516 -------------WPTVLKSYYETGKKVG--FHAFGGLLSYLQWLKLDTSLVTMGQVE-- 558
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ + + + LD L+NLE+F N+ G G+L+ +N +T GKR LR W+
Sbjct: 559 ---EYNPVRSQTCLALDGITLQNLEIFANTYDGTDRGSLFKLINRAITPMGKRKLRKWVM 615
Query: 694 RPLYNSGLIRERQDAV-AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL I R D+V L +N LE L +LPD+ER+L+R+ + S
Sbjct: 616 HPLLKIEDINSRLDSVDLLLSDMNLRDLLE--NELLKLPDLERMLSRVHSCS-------- 665
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
++Q F L G E + L + S + + P ++ +
Sbjct: 666 ----------LKIQYFNKVLCGFEDILALVEKLSIFADLKGSLKSYLTEIPS----SLTT 711
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
+L+ + +AFD A G I+P+ GV+ ++D + +++ IE L + L + +KLL ++I
Sbjct: 712 VLEAWSNAFDRNLAVKDGVIVPNRGVEPEFDESMDRIQGIEDQLQECLTQYKKLLKSSNI 771
Query: 873 TYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
+ GK++Y +EVP + +VP ++ ++ K F RY++ ++++L ++++A +
Sbjct: 772 QFKDSGKEIYTIEVPMAATRNVPHEWTQMAANKSFKRYYSADVQRLARQMAEAREMHKVL 831
Query: 933 LKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+ RL +F H+N W + A + + I+
Sbjct: 832 EDDLKNRLYKKFTNHYNAVWLPTIQAISNIDCII 865
>gi|145479585|ref|XP_001425815.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392887|emb|CAK58417.1| unnamed protein product [Paramecium tetraurelia]
Length = 1108
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 204/670 (30%), Positives = 332/670 (49%), Gaps = 54/670 (8%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + G DP TL++P + L++ +Q+W++KS++ DK+IFFK+GKFYELF
Sbjct: 200 RDKSGKLHGTSDADPTTLFIPQNEFNKLTKCMQQFWKYKSENFDKIIFFKLGKFYELFYE 259
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
DA++G K LDL +M G + H GFPE+ L GY+V++V+QTETPEQ+ R +
Sbjct: 260 DAYIGNKYLDLNWM-GRKMHTGFPEKAVHKYKALLLEYGYKVVIVDQTETPEQMNQRVAQ 318
Query: 420 K-----GSKDKVVKREICAVVTKGTLT--EGELLSANPDASYLMALTESNQSPASQSTDR 472
G+ DK+V+R + ++TKGT EGE N D L+ + + S +T
Sbjct: 319 NKKAGVGNTDKIVQRSVSEILTKGTYLYEEGES-QMNLDEKVLLVIRKKILS----NTIE 373
Query: 473 CFGICVVDVATSRIILGQVMD-DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT 531
+G+ +++ T+ I L + + D + L LL +RPVE + +N L
Sbjct: 374 EYGMAILERQTNTISLAFIENRDKNYESLKTLLLHMRPVETVIDSNNLPS---------- 423
Query: 532 RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
P+++ IK++ + ITA S + D A + E LP
Sbjct: 424 -------FDPITKMISGSV----IKSVISHITA-SKDNWDEKKALFRLEQYYQNGLPAA- 470
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
I + VL AL G YL + + + +L A+F+L + + + M+LD+
Sbjct: 471 ---IKFYKNNQVVLQALNGLFTYLNQILILDRVLGCAQFKLYD----EEFSLQQCMILDS 523
Query: 652 PALENLEVFENSRSGDSSG-TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A+ +LE+ + + D +L+ LN VT G RLLR W+ PLY IRERQ V
Sbjct: 524 QAIYHLEILQTTNQVDKKDFSLFGVLNKTVTPGGHRLLRRWVCAPLYQIDQIRERQTMVC 583
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
+ + L FR+++ + PD ER +R++ E + + +K V YE+ ++++L+EF +
Sbjct: 584 DISNFRKERDL-FRQSIKQFPDFERRCSRIY---EYSIKTESKAVFYENLSEQRLKEFKN 639
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILT---PGKGLPAIVSILKHFKDAFDWVEAN 827
L Q + G N S +L +++T G LP + L F+ W +
Sbjct: 640 LTKSLRLAQQEIALFGQYKINFRSERLRNMMTYEADGGLLPNVKEQLDEFEQYIIWEKEK 699
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEV 886
+ P GV YD + +V+ +E L +L++ +RKL + S K Y +E+
Sbjct: 700 DKEVPKPVTGVLESYDQSVAEVELVEQKLDSYLQQIKRKLFKNNSNIQYAHAKFRYEIEI 759
Query: 887 PESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFC 945
P+ L + S P D+E SS++G+ RY T IK L+ EL QAE K+ L + + F
Sbjct: 760 PDELVQKSKPEDFEFTSSRQGYKRYLTQEIKDLVTELEQAEETKKQQLTAFGNFIFKHFH 819
Query: 946 EHHNKWRQMV 955
+ + W ++
Sbjct: 820 SNQHVWDSLI 829
>gi|406701259|gb|EKD04409.1| DNA mismatch repair-related protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1161
Score = 273 bits (697), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 207/698 (29%), Positives = 335/698 (47%), Gaps = 72/698 (10%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D +D RPGD YDPRT+Y+P + + ++Q+WE K H D V+FF+ G
Sbjct: 242 FEFL-VDIKDKDGNRPGDPEYDPRTIYIPKKSWGSFTPFERQFWEIKQNHYDTVLFFQKG 300
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYEL+E DA +G +E DL+ + + G PE++F K GY+V VEQ ET
Sbjct: 301 KFYELYENDAAIGHQEFDLKLTDRVKMKMVGVPEQSFEFWAAKFLAAGYKVGKVEQAETA 360
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+E+R + G ++V+RE+ V T GT+ +G L+ + +A++ +++ ES+ P S+
Sbjct: 361 IGMEMRTTKGGGAKEIVRRELAQVFTNGTIVDGTYLTTD-EANHCVSIKESSLGPNLPSS 419
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
FGICV+D +T L DD+ C+ L + ++RP E++ LS T R
Sbjct: 420 ---FGICVMDASTGSFSLTAFEDDICCTRLETMFRQIRPKELVFAKGNLSVVTMR----- 471
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
L+ +++P S W + E ++ + I A + EG+
Sbjct: 472 ----LLRNILPPSTLWQSFKEGKEFLDVDDTIAA---------LKEYFPEGE-------- 510
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
L E I+ + A+GG L+YL+ LD+ L+ F S + + +VLD
Sbjct: 511 LPEAITAMTENHLAVEAVGGLLYYLRTLNLDKDLISQKNF-----SVYDPIRDGKALVLD 565
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L ++EV N+ G GTL + L C + FGKRL R WL PL ++ I R DAV
Sbjct: 566 GQTLGHMEVLMNNE-GSEEGTLLSLLQQCHSPFGKRLFRYWLTAPLRDAAAINARLDAVD 624
Query: 711 GLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
L ++ P F +F++ +PD+ERL++R+ A S +QL +F+
Sbjct: 625 DL--MHAPSFMSQFKELCKGMPDLERLVSRIHAGS-----------------IRQL-DFV 664
Query: 770 SALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
+ ++ + + + L I E ES + +L + P + L+H ++ F V +
Sbjct: 665 NVMNHFRRIQSSVNRLLEIAEGFESSSVAGLL---RSAPDLGPHLQHIQNMFTQVTDEKT 721
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL----GDTSITYVTIG-KDLYLL 884
I+P G D D A V EIE L +++ R+ L G+ + G K+++ L
Sbjct: 722 IAILPTEGADEACDEADAAVAEIEEELNAAMEQTRQELKLKTGEIRFWHSAQGNKEIFHL 781
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E+P + VP + S K RY TP + L+ + +A + A K+ + L+ +F
Sbjct: 782 EIPAKTK--VPPKWTKCGSLKQVARYITPVTQPLIRRMQEARETQSIAKKNFFRHLLSEF 839
Query: 945 CEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ + W +MV A L + SL A L + C
Sbjct: 840 DKDRDVWLKMVKVIAELDCL---NSLARASFNLDAPKC 874
>gi|221057249|ref|XP_002259762.1| DNA repair protein [Plasmodium knowlesi strain H]
gi|193809834|emb|CAQ40538.1| DNA repair protein, putative [Plasmodium knowlesi strain H]
Length = 1303
Score = 272 bits (695), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 205/698 (29%), Positives = 331/698 (47%), Gaps = 94/698 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPD--------FLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD R P + YD T++ PP + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 295 RDLNLRTPDNADYDSSTIWTPPQDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 354
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 355 RFYEIFYIDACLMHTICGLNWMGGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 414
Query: 411 EQLELRRKEK-GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT---------- 459
++LE R KE G KDK +KREI + TKGT+ +LS+ + YL+
Sbjct: 415 KELEQRNKETCGPKDKAIKREINEIYTKGTILHDNMLSS--ETRYLICFHFDDVEDLDDG 472
Query: 460 --------------ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S+QS S + FG V D+ATS I +G DD L +L+
Sbjct: 473 VVGICNGGVGSLPGSSSQSERSIRSKCNFGFVVSDIATSYIAVGYCNDDESRIELRTILA 532
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+L P EI+ + ++ E +I ++ P +L +S F + ++ EI+ + I
Sbjct: 533 QLCPAEILYASKNINKEV-LSIFKNI--PAEPELTGVSSFPNIIASLDEIRKYFETIPPS 589
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ N V+ A GG + YL+ LD+ +
Sbjct: 590 LEMHKEQN-----------------------------SVICAFGGFIVYLRSLLLDKKIF 620
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
RF K E + ++ YMVLDA AL++LE+ E ++SG++ +L+ +N T FG
Sbjct: 621 RFCKIE-----HYDLFKRENYMVLDATALKHLEILE-TQSGETKNSLFDYVNKTCTNFGA 674
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R +R W+ PL + I ER D V L+ +L R L +LPD+ERLL ++ +
Sbjct: 675 RNMRRWICSPLLDCTKINERLDVVDFLKKNEHILSL-IRLKLKKLPDIERLLNKICIQAS 733
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES--RQLHHIL-T 802
+ R + V +++ +L+EF++ L+ + + + +I ++ E ++L I T
Sbjct: 734 QSERGA---VFFDNIVNTKLKEFMTFLNAFKEIGSMLIEINSIEKDEEELPKRLFEISNT 790
Query: 803 PGK---------GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
P + P I I F +E + P G D D KK +E+E
Sbjct: 791 PDRRSLVKNIQGNYPHIEQITTEF---LKKIEFDGDKEYKPAEGCDEAIDQINKKEREVE 847
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L L +K + +S+ YV K Y +E PE++ +D E+ S+KKGF R+
Sbjct: 848 IELNNILTSMKKKMKISSLKYVH-AKYKYEVECPENVPKVFLKDVEITSAKKGFIRFQND 906
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
IK+ + L EK+ A+ +++ F H+ K+
Sbjct: 907 EIKQCVEMLEDIVQEKKDAIYPFFKKIFHLFYAHYEKY 944
>gi|241950279|ref|XP_002417862.1| mismatch DNA repair protein, mutS homologue, putative [Candida
dubliniensis CD36]
gi|223641200|emb|CAX45579.1| mismatch DNA repair protein, mutS homologue, putative [Candida
dubliniensis CD36]
Length = 1222
Score = 271 bits (694), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 200/690 (28%), Positives = 343/690 (49%), Gaps = 64/690 (9%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F +++ +L D RDA++R YDPRTLY+P + +KQ+W+ KSK +
Sbjct: 281 FEKENEERYQWL-VDIRDAEKRPADHPDYDPRTLYIPQSAWSKFTAFEKQYWQIKSKMWN 339
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FF+ GKFYEL+E DA + + DL+ G + + G PE +F ++ GY+
Sbjct: 340 TVVFFQKGKFYELYENDAVIANTQFDLKIAGGGRANMKLAGIPEMSFEYWAKEFISHGYK 399
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V VEQ E+ ++R ++K+++RE+ ++T GTLT +++S N A+Y +++ E
Sbjct: 400 VAKVEQKESMLVKQMRGGAT-KEEKIIERELKGILTGGTLTNLDMIS-NDMATYCLSIKE 457
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANML 519
+ +++ FG+ VD ATS + ++ DD +C+ L L++++ P EII + N+
Sbjct: 458 EEKEDGTKT----FGVAFVDTATSELNFIELDDDAECTKLDTLITQINPKEIICEKRNLC 513
Query: 520 SPETERAILR---HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
T+ IL+ H+ + + N L P++EFWD + I E L KA A
Sbjct: 514 QIATK--ILKFCAHSDHQIWNALNPITEFWDYD------------IALEQLVKAKYYDAE 559
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ D + P +L + D+ +A GG L+YLK LD +++ S
Sbjct: 560 NL---DDYSKYPKVLVDF---KDNHQVTFNAFGGLLYYLKLLKLDTSIMSLGNIHEYHIS 613
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+M+LD L NLE+ N+ G + GTL+ +N T+FGKR L+ W+ PL
Sbjct: 614 ----RNSASHMILDGITLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPL 669
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I +R DAV L + L+ +PD+ERLLAR+ +
Sbjct: 670 FKVDEINQRYDAVDYLMNDGLELRSILQDTLANIPDLERLLARVHGGT------------ 717
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVSILK 815
+ ++F+ + E + S L N ES L+ L K P + +++
Sbjct: 718 ------LRFRDFLKVIESFESIASVSSKL-VDFTNVESGMLYKYL---KSFPHEMCELIQ 767
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
++DAFD +A + I+P G D ++D++ +++++ L K LKE ++ I Y
Sbjct: 768 QWEDAFDREQA-KTDTIVPSPGTDEEFDNSQASMEDLKCQLDKLLKEYKRTYKSQEICYR 826
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
GK++YL+EVP L+ VP D++ S RY++P ++ L EL + + +
Sbjct: 827 DSGKEIYLIEVPFKLK--VPSDWKQMGSTSKVKRYYSPEVETLAKELRGQQELHKMVCDT 884
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ R+ +F +H+N W Q++ A + +L
Sbjct: 885 LRLRMYEKFDKHYNVWMQVIQTIANIDCLL 914
>gi|156094380|ref|XP_001613227.1| DNA repair protein [Plasmodium vivax Sal-1]
gi|148802101|gb|EDL43500.1| DNA repair protein, putative [Plasmodium vivax]
Length = 1289
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 206/699 (29%), Positives = 335/699 (47%), Gaps = 96/699 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPP-------DFLR-NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD R P + YD T++ PP ++ + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 290 RDLNLRTPDNADYDCSTIWTPPPDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 349
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ + +K+ G++V+V+EQ ETP
Sbjct: 350 RFYEIFYIDACLMHTICGLNWMGGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETP 409
Query: 411 EQLELRRKEK-GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT---------- 459
++LE R KE G KDK +KREI + TKGT+ +LS+ + YL+
Sbjct: 410 KELEQRNKETCGPKDKAIKREINEIFTKGTILHDNMLSS--ETKYLVCFHFDDIEDLDGG 467
Query: 460 --------------ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S+QS S + FG V D+ATS I +G DD L +L+
Sbjct: 468 VVDVGVGGVGSLPGSSSQSDRSVKSKCNFGFVVSDIATSYIAVGYCNDDESRIELRTILA 527
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+L P EI+ + ++ E +L +N P +L +S F + ++ EI+ + I
Sbjct: 528 QLCPAEILYASKNINKE----VLSIFKNIPAEPELTAVSSFPNIIASLDEIRKYFETIPP 583
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+ N V+ A GG + YL+ LD+ +
Sbjct: 584 SLEMHREQN-----------------------------SVICAFGGFIVYLRSLLLDKKI 614
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
RF K E + ++ YMVLDA AL++LE+ E ++SG++ +L+ +N T FG
Sbjct: 615 FRFCKIE-----HYDLFKRENYMVLDATALKHLEILE-TQSGETKNSLFDYVNKTCTNFG 668
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R +R W+ PL + I ER D V L+ +L R L +LPD+ERLL ++ +
Sbjct: 669 ARNMRRWICSPLLDCTRINERLDVVEFLKKNEHILSL-IRLKLKKLPDIERLLNKICIQA 727
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES--RQLHHIL- 801
+ R + V +++ +L+EF++ L+ + + + +I ++ E ++L+ I
Sbjct: 728 SQSERGA---VFFDNIVSTKLKEFMTFLNAFKEIGSMLIEINSIEKDEEELPKRLYEISN 784
Query: 802 TPGK---------GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
TP + P I I F +E + P G D D K KEI
Sbjct: 785 TPDRKSLLRKVQGSYPHIEQITNEF---LKKIEFDGDKEYKPAEGCDEAIDLINSKEKEI 841
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
E LT L ++ + +S+ YV K Y +E PE++ + E+ S+KKGF R+
Sbjct: 842 EGELTNILTNMKRNMKISSLKYVH-AKYKYEVECPENVPKHFLKHVEITSAKKGFIRFQN 900
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
IK+ + L + EK+ A+ +++ F H+ K+
Sbjct: 901 DEIKQCVEMLEDIDQEKKDAIYPFFKKMFHLFYAHYEKY 939
>gi|389584278|dbj|GAB67011.1| DNA repair protein [Plasmodium cynomolgi strain B]
Length = 1282
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 211/718 (29%), Positives = 342/718 (47%), Gaps = 91/718 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPP-------DFLR-NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD R P + YD T++ PP ++ + + + G +Q+W+ KSK+ DK+IFFKMG
Sbjct: 294 RDLNLRTPDNADYDCSTIWTPPPDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 353
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GEQ PH GFPE++ M +K+ G++V+V+EQ ETP
Sbjct: 354 RFYEIFYIDACLMHTICGLNWMGGEQKPHLGFPEQSLHMYAKKVINCGHKVVVIEQMETP 413
Query: 411 EQLELRRKEK-GSKDKVVKREICAVVTKGTLTEGELLSA--------------NPDASYL 455
++LE R KE G KDK +KREI + TKGT+ +LS+ + D +
Sbjct: 414 KELEQRNKESCGPKDKAIKREINEIFTKGTILHDNMLSSETRYLVCFHFDDIEDVDDGVV 473
Query: 456 MALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKP 515
A N+ P + FG V D+ATS I +G DD L +L++L P EI+
Sbjct: 474 DAGNGVNERPFRSKCN--FGFVVSDIATSYIAVGYCKDDESRIELRTILAQLCPAEILYA 531
Query: 516 ANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVA 575
+ ++ E +I ++ P +L +S F + ++ EI+ + I
Sbjct: 532 SKNINKEV-LSIFKNI--PAEPELTAVSSFPNIIASLDEIRKYFEPI------------- 575
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
P IL + V+ A GG + YL+ LD+ + RF K E
Sbjct: 576 ------------PPIL----EMHKEQNSVICAFGGFIVYLRSLLLDKKIFRFCKIE---- 615
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ ++ YMVLDA AL++LE+ E ++SG++ +L+ +N T FG R +R W+ P
Sbjct: 616 -HYDLFKRENYMVLDATALKHLEILE-TQSGETKNSLFDYVNKTCTNFGARNMRRWICSP 673
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
L + I ER D V L+ N+ R L +LPD+ERLL ++ + + R + V
Sbjct: 674 LLDCTKINERLDVVEFLKK-NEHILSMIRLKLKKLPDIERLLNKICIQASQSERGA---V 729
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES--RQLHHIL-TPGK------- 805
+++ +L+EF++ L+ + + + I ++ E ++L I TP +
Sbjct: 730 FFDNIVSTKLKEFMTFLNAFKEIGSMLIEINTIEKDEEELPKRLFEISNTPDRKSLIQNV 789
Query: 806 --GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
P I I F +E + P G D D K KE+E L L
Sbjct: 790 QGSYPHIEEITLEF---LKKIEFDGDKEYKPAEGCDEAIDLINNKEKEVENELNSILANM 846
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
++ + +S+ YV K Y +E PE++ S ++ E+ S+KKGF R+ IK+ + L
Sbjct: 847 KRNMKISSLKYVH-AKYKYEVECPENVPKSFLKNVEITSAKKGFIRFQNDEIKQCVEMLE 905
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNS 981
+ EK+ A+ +++ F H+ K+ A L L AF + N+
Sbjct: 906 DIDQEKKDAIYPFFKKMFHLFYAHYEKYVSACRLVAEL-------DCLQAFAFVALNT 956
>gi|401882497|gb|EJT46755.1| DNA mismatch repair-related protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 1161
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 206/698 (29%), Positives = 337/698 (48%), Gaps = 72/698 (10%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D +D + RPGD YDPRT+Y+P + + ++Q+WE K H D V+FF+ G
Sbjct: 242 FEFL-VDIKDKEGNRPGDPEYDPRTIYIPKKSWGSFTPFERQFWEIKQNHYDTVLFFQKG 300
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYEL+E DA +G +E DL+ + + G PE++F K GY+V VEQ ET
Sbjct: 301 KFYELYENDAAIGHQEFDLKLTDRVKMKMVGVPEQSFEFWAAKFLAAGYKVGKVEQAETA 360
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+E+R + G ++V+RE+ V T GT+ +G L+ + +A++ +++ ES+ P S+
Sbjct: 361 IGMEMRTTKGGGAKEIVRRELAQVFTNGTIVDGTYLTTD-EANHCVSIKESSLGPNLPSS 419
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
FGICV+D +T L DD+ C+ L + ++RP E++ LS T R
Sbjct: 420 ---FGICVMDASTGSFSLTAFEDDICCTRLETMFRQIRPKELVFAKGNLSVVTMR----- 471
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
L+ +++P S W + E ++ + I A + EG+ LP
Sbjct: 472 ----LLRNILPPSTLWQSFKEGKEFLDVDDTIAA---------LKEYFPEGE----LPAA 514
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLD 650
++ + + A+GG L+YL+ LD+ L+ F S + + +VLD
Sbjct: 515 ITAMT----ENHLAVEAVGGLLYYLRTLNLDKDLISQKNF-----SVYDPIRDGKALVLD 565
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
L ++EV N+ G GTL + L C + FGKRL R WL PL ++ I R DAV
Sbjct: 566 GQTLGHMEVLMNNE-GSEEGTLLSLLQQCHSPFGKRLFRYWLTAPLRDAAAINARLDAVD 624
Query: 711 GLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
L ++ P F +F++ +PD+ERL++R+ A S +QL +F+
Sbjct: 625 DL--MHAPSFMSQFKELCKGMPDLERLVSRIHAGS-----------------IRQL-DFV 664
Query: 770 SALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNS 829
+ ++ + + + L I E ES + +L + P + L+H ++ F V +
Sbjct: 665 NVMNHFRRIQSSVNRLLEIAEGFESSSVAGLL---RSAPDLGPHLQHIQNMFTQVTDEKT 721
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL----GDTSITYVTIG-KDLYLL 884
I+P G D D A V EIE L +++ R+ L G+ + G K+++ L
Sbjct: 722 IAILPTEGADEACDEADAAVAEIEEELNAAMEQTRQELKLKTGEIRFWHSAQGNKEIFHL 781
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E+P + VP + S K RY TP + L+ + +A + A K+ + L+ +F
Sbjct: 782 EIPAKTK--VPPKWTKCGSLKQVARYITPVTQPLIRLMQEARETQSIAKKNFFRHLLSEF 839
Query: 945 CEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+ + W +MV A L + SL A L + C
Sbjct: 840 DKDRDVWLKMVKVIAELDCL---NSLARASFNLDAPKC 874
>gi|409076365|gb|EKM76737.1| hypothetical protein AGABI1DRAFT_78171 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1262
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 208/713 (29%), Positives = 353/713 (49%), Gaps = 69/713 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D + FL D +D +RPG+ YDPRTL++P + + +KQ+WE K H D V+FF+
Sbjct: 299 DPYAFL-QDVKDKDGKRPGEPGYDPRTLHIPSSVWKEFTPFEKQFWEIKQNHYDTVLFFQ 357
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF+EL+E DA +G +E DL+ + + G PE + K KGY+V V+Q+E
Sbjct: 358 KGKFFELYEDDARIGHQEFDLKLTSRVKMSMVGVPEMSLDFWTAKFLGKGYKVGRVDQSE 417
Query: 409 TPEQLELRRKEKG------SKDKVV-KREICAVVTKGTLTEGELLSANPDASYLMALTES 461
T E+R K KG +KDK+V +RE+ V T GTL + ELL + +A + +A+TE
Sbjct: 418 TALGAEMRNKSKGKASEDKAKDKIVRRRELNKVYTNGTLVDPELL-IDDNAGHCVAITE- 475
Query: 462 NQSPASQSTD--RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
P+ D FGICV+D +TS+ L DD+ + L L+ ++RP E++ L
Sbjct: 476 --EPSEDGKDLQNKFGICVLDCSTSQFNLSAFEDDVCRTKLETLMRQIRPKELLFKKGSL 533
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
S T R ++ ++P + W T++ ++ T E L K +
Sbjct: 534 SVSTTR---------MLKMILPTNVLW---TSLRTVEGFDYDQTMEQL-KTLFPPGDEDM 580
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
E DG LP + E I S + + +LG ++YL++ +D+ ++ F + +
Sbjct: 581 EDDGDDALPASVPESIREMASYPKAIESLGCMIWYLRQLNIDKEIISMKNFNV-----YD 635
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
M + + L+ +L +LE+ N+ G G+L LN C+T+FGKRL R WL PL N
Sbjct: 636 PMKRGQGLTLEGQSLAHLEILINNE-GTEDGSLLKLLNRCITSFGKRLFRIWLCMPLRNV 694
Query: 700 GLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
I R DAV + +N P F +F + LPD+ER+++R+ A++
Sbjct: 695 VDINARLDAVEDI--MNHPTFEADFVEIAKGLPDLERIVSRIHANN-------------- 738
Query: 759 DAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFK 818
++++F+ L + + + L E+ +S+ + +L +G P ++ +KH +
Sbjct: 739 ----CKIKDFLKVLASFRKLSRGLNKLADESEDFKSKTILGLL---RGAPDLIPHVKHIE 791
Query: 819 DAFDWVEANN--SGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY-- 874
+ F + + S ++P G D +YD+ ++ +E L + L E +G +TY
Sbjct: 792 EMFQRPDPSGKASDELLPQKGKDEEYDAIVAEINGVEGKLEEALSELEDQVG-FKLTYWH 850
Query: 875 -VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
T KD+YL+E+ ++ P + S K RY P+++ + +L +A + +A+
Sbjct: 851 SATGHKDIYLVEI--AVAKKAPSTWTKHSGTKAKNRYVVPSLQSKIRQLKEARENRTTAI 908
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
KS RL +F + + W + + A L + SL + ++ S SC E
Sbjct: 909 KSFKSRLFAEFDQDRSVWLRSIRVFAELDCLF---SLAKSSTVIGSPSCRPEF 958
>gi|443897710|dbj|GAC75049.1| mismatch repair ATPase MSH6 [Pseudozyma antarctica T-34]
Length = 2956
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 217/721 (30%), Positives = 338/721 (46%), Gaps = 77/721 (10%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+R A + FL D RD RPGD YD RT+++P ++ + ++Q+W K H
Sbjct: 1604 KRKRAENEQAYSFL-VDLRDKDGNRPGDAEYDSRTVFIPKSAWKDFTPFEEQFWRIKQNH 1662
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D V+FF+ GKFYEL+E DA +G +E DL+ + + G PE +F + K GY+
Sbjct: 1663 WDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVPEASFDIFAAKFLALGYK 1722
Query: 401 VLVVEQTETPEQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLM 456
V V+QTET +R + +G ++V RE+ V+T GT+ + L PD SY +
Sbjct: 1723 VGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIVDAASL---PDDLNSYCV 1779
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
++ E ++ FG+C +D +T+ L + DD + L LL LR E++
Sbjct: 1780 SIKEDA---SAGRNGPLFGVCTLDASTAEFNLTEFEDDESRTRLETLLRSLRLKEVLHEK 1836
Query: 517 NMLSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYN-----RITAESLNK 569
LSP+T R +LR T + L P EF + ETT+ ++ ++N E+L
Sbjct: 1837 AGLSPQTLR-VLRSTVPSTAQITMLKPGVEFLEPETTLRKLNALFNPDVDAEARVETLEP 1895
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
D P +L E I + + +SALGG L YL + LD L
Sbjct: 1896 VD----------------PALLPEGIESMVDRACAMSALGGMLCYLAQLNLDRDLCSSRN 1939
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F + F + + +VLDA +L +L V +N G GTL+ LN CVT FGKRL +
Sbjct: 1940 FNI-----FDPLKQDKCLVLDAQSLTHLNVLQND-EGTEEGTLHRLLNRCVTPFGKRLFK 1993
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANG 748
WL PL + IR RQDAV L + P F EF LPD+ER++ R+
Sbjct: 1994 IWLVAPLATADAIRARQDAVEDL--LKYPGFGDEFETFGKTLPDIERIVPRV-------- 2043
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
A K + ++F + L +++ L A + E+ + +L +P
Sbjct: 2044 ----------RAGKCRPRDFTAVLKALTRFEKSVRQLRAHCDGFETAVISDLL---DSIP 2090
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG 868
A+ I + + +F E G P G YD A + ++EA L + RK L
Sbjct: 2091 AVSPIARELQSSFRMTE---DGSFNPIEGAFEPYDRAEAAIAKVEAQLEHEIDSYRKQLK 2147
Query: 869 DTS--ITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
TS + +G KD++ +EVP S + VP ++ S K R+++P ++ L+ ++ +A
Sbjct: 2148 LTSAKCAWKHLGTKDIFQIEVPVSTK--VPANWTKLSGTKDRNRWYSPKVRDLVQDIKEA 2205
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSE 985
+ +ALK Q L F E + + Q V A + +L SL + + SC E
Sbjct: 2206 RETRLAALKQFHQSLFASFSEQSDVFLQAVKTVAEVDCLL---SLAKSSYAIGEPSCRPE 2262
Query: 986 M 986
+
Sbjct: 2263 L 2263
>gi|322778889|gb|EFZ09305.1| hypothetical protein SINV_13902 [Solenopsis invicta]
Length = 838
Score = 269 bits (688), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 253/466 (54%), Gaps = 41/466 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL P++ +D RR D YDP+TLY+P DFL N + +QWWE KS+H D V FFK
Sbjct: 150 KLDFLKPEKIKDINRRTLNDPDYDPKTLYVPTDFLNNQTPAMRQWWELKSRHFDCVFFFK 209
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA +G EL L YM+GE H GFPE + L +GY+V +EQTE
Sbjct: 210 IGKFYELYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARIEQTEN 269
Query: 410 PEQLELR--RKEKGSK-DKVVKREICAVVTKGT--LTEGELLSANPDASYLMALTESNQS 464
PE + R + + +K DKVVKREIC V T+GT T ++ ++ P+++YL++L E
Sbjct: 270 PEMMATRCSKMSRPTKFDKVVKREICQVSTRGTRVYTPLDVEASTPNSNYLLSLVEKCDV 329
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ S+ +G+C +D LGQ +DD S L LL+ PV II N LS +T+
Sbjct: 330 GSTASS---YGVCFIDTTIGEFYLGQFVDDRCNSRLLTLLAHHPPVHIIYERNNLSQKTQ 386
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
+ I L L ++FW A TTVL+ ++ ES K + + + EG
Sbjct: 387 QLINSTLPAALKESLQRETQFWSA-TTVLK------KLHEESYFKKEDGPSFAWPEG--- 436
Query: 585 TCLPGILSELISTG----DSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
L L+E S G D+ + ALGG ++ LK+ L++ LL A F F
Sbjct: 437 --LKPYLNEGDSLGLTPADNKELAVHALGGCVYLLKEFLLEQQLLAQACFNTYTPPDFSA 494
Query: 641 MAKKP------YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ + MV+DA ++NL +F G+L + L+ C TAFGKRLLR W+ R
Sbjct: 495 ASSRAGLNYANTMVIDAVTIKNLRLF-------GEGSLISILDRCCTAFGKRLLREWICR 547
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPDMERLLAR 739
P +I ERQ AV L V++ + A LS LPD+ERLL++
Sbjct: 548 PSCRKTVIIERQQAVQEL--VDRMDVTQSAHAILSALPDLERLLSK 591
>gi|346974058|gb|EGY17510.1| DNA mismatch repair protein msh6 [Verticillium dahliae VdLs.17]
Length = 1211
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 206/713 (28%), Positives = 345/713 (48%), Gaps = 92/713 (12%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+D++ +L + D R+ PGD Y+P ++Y+PP S +KQ+W K D ++FF
Sbjct: 290 SDRYPWLA-NITDIDRKSPGDPEYNPSSIYIPPGAWNKFSPFEKQYWAIKQNLWDTIVFF 348
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKF+EL+E DA +G + D + + G PE + M V + KG++V V+Q
Sbjct: 349 KKGKFFELYENDATIGHQLFDFKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQM 408
Query: 408 ETPEQLELR-RKEKGSK----DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
E+ E+R R ++ +K DK+++RE+ ++T GTL EG +L + A+Y A+ ES
Sbjct: 409 ESALGKEMRERDDQAAKSKKVDKIIRRELACILTGGTLVEGSMLQDDL-ATYCAAIKESI 467
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
FGI VD AT + + + DD+D + +++ P E++ ++LS +
Sbjct: 468 TDGIPS-----FGISFVDCATGQFFITEFEDDVDLTKFETFVAQTSPRELLLEKSLLSSK 522
Query: 523 TERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
R IL++ +P + N P EF DA+ +T L+ + + E
Sbjct: 523 ALR-ILKNNTSPTTIWNYRKPGLEFLDAD------------VTRRELDTGGYFDGDGEKE 569
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
G P +L+E +S+LG + YL+ ++++LL FE +
Sbjct: 570 GG----WPAVLAE----AKEKDLAMSSLGALVKYLQLLKIEQSLLSQGNFEW-----YNP 616
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
+ + ++LD L NLEVF NS +G + GTL+ LN CVT FGKRL R W+ PL +
Sbjct: 617 IRRNGTLILDGQTLINLEVFANSANGSTEGTLFTLLNKCVTPFGKRLFRQWVCHPLCDID 676
Query: 701 LIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY 757
I ER DAV L R V + F+ + ++++PD+ERL++R+ A V
Sbjct: 677 RINERLDAVDMLNSDRSVREQFSAQ----MTKMPDLERLISRIHAG-----------VCR 721
Query: 758 EDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL--------PA 809
D +F+ L G E ++ S LGA GKGL P
Sbjct: 722 PD-------DFVKVLEGFEQIEYTMSLLGA-------------WGGGKGLVDRLLSSMPN 761
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ L ++K AFD ++A N +P G++ D+D + ++ EI+ L K L++++ L
Sbjct: 762 LDEPLSYWKTAFDRMKAKNDRMFLPERGIEEDFDESQDRIAEIKKDLGKLLEKKKAELKC 821
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
++ + IGK+++ +E P+S + VP + S+ RY+ + +L+ +L +AE
Sbjct: 822 KTLKFTDIGKEIFQIEAPKSTK--VPSSWRQMSATSSVKRYYFDALTELVRDLQEAEETH 879
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+K + R +F + W Q + + L ++ SL A L SC
Sbjct: 880 GQIMKEVASRFFRRFDADYATWLQAIRIISQLDCLV---SLAKASSSLGEPSC 929
>gi|320593113|gb|EFX05522.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 1190
Score = 265 bits (678), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 195/701 (27%), Positives = 328/701 (46%), Gaps = 85/701 (12%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
E+ RE ++ + + D R +PG +D T+++PP+ S +KQ+WE K K
Sbjct: 257 EKAYTREPEERYSWLANIMDMNRNKPGHPDFDKSTVFVPPNAWNKFSPFEKQYWEIKQKL 316
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D ++FFK GKF+EL+E DA +G + DL+ + G PE + M V + KGY+
Sbjct: 317 WDTIVFFKKGKFFELYENDATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYK 376
Query: 401 VLVVEQTETPEQLELRRKE----KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
V V+Q E+ E+R + K +DK+++RE+ V+T+GTL EG +L + A++
Sbjct: 377 VARVDQMESALGKEMRERGASAVKSKQDKIIRRELACVLTRGTLVEGSMLQDDM-ATFCA 435
Query: 457 ALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
A+ + + P FGI VD AT + + DD + + ++++ P E+I
Sbjct: 436 AIKQDVVDGKPV-------FGIAFVDAATGQFFFSEFEDDAELTKFETFVAQMAPQELIL 488
Query: 515 PANMLSPETERAILRHTRNPLV--NDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADS 572
N +S + R IL++ P+ N SEFWDA+TT E+ + TA+ D
Sbjct: 489 EKNCISTKALR-ILKNNTTPMTIWNYRKSGSEFWDADTTRREL-DCGGYFTADDGGNED- 545
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
P L+E+ ++SA G + YL+ L+ L+ A FE+
Sbjct: 546 --------------WPKKLAEV----REKPFLMSAFGALVNYLRDLKLERNLVSQANFEM 587
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ + + ++LD L NLE+F N+ +G GTL+ LN C+T FGKRL R WL
Sbjct: 588 -----YNPIHRNGTLILDGQTLINLEIFSNTVNGGPEGTLFNLLNRCITPFGKRLFRKWL 642
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL + I ER DAV L ++ +F + ++PD+ERL +R+ A S
Sbjct: 643 CHPLCDIRKINERLDAVDML-NADRSLRDQFSSEMCKMPDLERLASRIHAGS-------- 693
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL----- 807
+ ++F+ L G E ++ ++G L +L G GL
Sbjct: 694 ----------CKAEDFVRVLEGFEQIEY---TMG----------LLRVLNGGNGLVDRLL 730
Query: 808 ---PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L ++K AFD A +IP G+D D+D + I+ L L+ +
Sbjct: 731 AAMPDLNEPLSYWKTAFDRKRAREDKLLIPERGIDEDFDECADAITGIKGKLQSVLERSK 790
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
L + + +GK++Y +EVP++ + VP+ + S+ R++ + +L+ L +
Sbjct: 791 AELKCRNAKFTDVGKEIYQVEVPKATK--VPKSWRQMSANNAVRRFYFAELDELVRGLQE 848
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
AE + R +F W++ + A L ++
Sbjct: 849 AEETHSQLTREAALRFCKRFDADAEIWQEAIRIIAQLDCLI 889
>gi|299742330|ref|XP_001832397.2| DNA mismatch repair protein msh6 [Coprinopsis cinerea okayama7#130]
gi|298405134|gb|EAU89431.2| DNA mismatch repair protein msh6 [Coprinopsis cinerea okayama7#130]
Length = 1269
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 205/709 (28%), Positives = 341/709 (48%), Gaps = 68/709 (9%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D RD RRPG+ YDPRT+Y+P + +KQ+WE K H D V+FF+ G
Sbjct: 317 FSFLQ-DIRDKDGRRPGEPDYDPRTIYIPKKAWAEFTPFEKQFWEIKQNHYDTVLFFQKG 375
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KF+EL+E DA +G +E DL+ + + G PE +F+ K KGY+V VEQ ET
Sbjct: 376 KFFELYEDDARIGHQEFDLKLTSRVKMSMVGVPESSFNFWAAKFLGKGYKVGRVEQAETA 435
Query: 411 EQLELRR---KEKG------SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
E+R K KG +KDK+V+RE+ V T GTL + LL+ + +A + +A+ E
Sbjct: 436 LGAEMRMAAAKGKGKVSEDKAKDKIVRRELNKVYTNGTLVDDALLT-DENAGHCIAICEQ 494
Query: 462 NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
S S ++ FGICV+D +TS+ L +DD+ + L LL ++ P E++ S
Sbjct: 495 PCEDGSDSANK-FGICVLDCSTSQFNLTGFVDDICRTKLETLLRQICPKELLFYKGSFSV 553
Query: 522 ETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG 581
+T+R ++ ++P W T + E++ ++L + ++ E
Sbjct: 554 DTQR---------VLKAVLPSDCLW---TGLREVEGFKYDDALKALKDLFPSEEDAMEED 601
Query: 582 DG-LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
+G LP + E I + + ALG ++YL++ +D+ ++ F + +
Sbjct: 602 EGEAQLLPPSVPESIRKMATDKCAIEALGSMIWYLRQLNIDKDIVTMRNFNI-----YDP 656
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
M + +VLD L +LE+ N+ G G+L+ L C+T FGKRL R WL PL
Sbjct: 657 MERNQGLVLDGQTLAHLEILLNN-EGSEDGSLFHLLRRCITPFGKRLFRIWLCMPLREVS 715
Query: 701 LIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I R DAV + + P F F + +PD+ER+++R+ A +
Sbjct: 716 AINARLDAVEDI--MKHPTFESSFSELAKGIPDLERIVSRIHAKN--------------- 758
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
++++F+ L + + + + L E ES+ + +L +G P ++ ++H +
Sbjct: 759 ---CKVKDFLKVLSTFKSLSRGLAKLADESEEFESKTILGLL---RGAPDLLVNVRHLES 812
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIG 878
F+ + + P G D +YD ++++ +E L K LK K G D + IG
Sbjct: 813 MFEKPSDKDRDELKPVEGKDEEYDGIVREIRSLERDLDKSLKAFEKETGLDLDYWHSAIG 872
Query: 879 -KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
KD+YL+E VP D+ RY P+++ + +L +A +A+K+
Sbjct: 873 TKDIYLVETSAKNADDVPDDWAKN-------RYSVPSLQPTIRKLKEARENLNTAVKNFK 925
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
RL +F + ++W + + A L + SL A + S SC E
Sbjct: 926 FRLYAEFDKDRSQWLRAIRVFAELDCLF---SLAKASAAIGSPSCRPEF 971
>gi|145539700|ref|XP_001455540.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423348|emb|CAK88143.1| unnamed protein product [Paramecium tetraurelia]
Length = 1106
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 200/673 (29%), Positives = 333/673 (49%), Gaps = 60/673 (8%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + G DP TL +P L++ +Q+W++KS++ DK+IFFK+GKFYELF
Sbjct: 201 RDKSGKLHGTSDADPTTLLIPQSDFNKLTKCMQQYWKYKSENFDKIIFFKLGKFYELFYE 260
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR--- 416
DA++G K LDL +M G + H GFPE+ L GY+V++V+QTETPEQ+ R
Sbjct: 261 DAYIGNKYLDLNWM-GRKMHTGFPEKAVHKYKALLLEYGYKVVIVDQTETPEQMNQRVTQ 319
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLT--EGELLSANPDASYLMALTESNQSPASQSTDR 472
+ +G+ DK+V+R+I ++TKGT EGE N D L+ + + S A +
Sbjct: 320 NKKTGQGNTDKIVQRQISEILTKGTYLYEEGE-SQMNLDEKVLLVIRKKIISNAIEE--- 375
Query: 473 CFGICVVDVATSRIILGQVMD-DLDCSVLCCLLSELRPVE-IIKPANMLSPE-TERAILR 529
+GI +++ T+ I L + + D + L LL +RPVE +I N+ S + + I
Sbjct: 376 -YGIAILERQTNTISLAFIENRDKNYESLKTLLLHMRPVETVIDQHNLPSHDPITKMIGG 434
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+++ L + WD + + ++ Y A N+Q
Sbjct: 435 SVIQSVISHLTASQDNWDEKKALFRLEQYYQN----EFPPAIKFYKNNQV---------- 480
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
VL AL G YL + + +L A+F++ + + M+L
Sbjct: 481 --------------VLQALNGLFTYLNYILILDKVLGCARFKIYN----EVFSLQQCMIL 522
Query: 650 DAPALENLEVFENSRSGDSSG-TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
D+ A+ +LE+ + + S D +L+ LN VT G RLLR W+ PLY IRERQ
Sbjct: 523 DSQAIYHLEILQTTNSVDKKDYSLFGVLNKTVTPGGHRLLRRWVCAPLYQVDQIRERQAM 582
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
V + + L FR+++ + PD ER +R++ E + ++ +K V YE+ ++++L+EF
Sbjct: 583 VCDISNFRKERDL-FRQSIKQFPDFERRCSRIY---EYSIKSESKAVFYENLSEQRLKEF 638
Query: 769 ISALHGCELMDQACSSLGAILENTESRQLHHILT---PGKGLPAIVSILKHFKDAFDWVE 825
S +L + + G + N +S +L ++T G LP + L F+ W +
Sbjct: 639 KSLTSTLKLAQEEITLFGQLQINFKSERLRKMMTFEANGGLLPNVQEQLNEFEQYIIWEK 698
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL--GDTSITYVTIGKDLYL 883
+ P GV YD + V+ ++ L +L++ +K+L + +I +V K Y
Sbjct: 699 EKDKEIPKPVPGVLDTYDQSIAGVQLVQQKLDNYLQQIKKILFKNNGNIQFVHT-KFRYE 757
Query: 884 LEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+E+P+ L S P D+E SS++G+ RY T IK ++ EL QAE K+ L + +
Sbjct: 758 IEIPDELVEKSKPEDFEFTSSRQGYKRYITKEIKDMVTELEQAEELKKQQLNAFGNFIFK 817
Query: 943 QFCEHHNKWRQMV 955
F + + W ++
Sbjct: 818 HFQSNQSVWDTLI 830
>gi|403217222|emb|CCK71717.1| hypothetical protein KNAG_0H03020 [Kazachstania naganishii CBS
8797]
Length = 1207
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/700 (27%), Positives = 338/700 (48%), Gaps = 80/700 (11%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ + +++H+L + +DA+ R P D YDPRTL +P + +KQ+WE K + D
Sbjct: 238 FNKQNEERYHWL-VNEKDAQGRPPSDPEYDPRTLAIPSSAWGKFTPFEKQYWEIKCQMWD 296
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGYR 400
++FFK GKF+EL+E DA + D + + G PE +F + + GY+
Sbjct: 297 CIVFFKKGKFFELYEKDALLANSLFDWKLAGNGRANMQLAGIPEMSFEYWASQFIQLGYK 356
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V V+Q E+ E+R KG +VKRE+ V+T GTLT+G+++ + A+Y +A+ E
Sbjct: 357 VAKVDQKESMLAKEMREGAKG----IVKRELECVLTAGTLTDGDMIHTDL-ATYCLAIKE 411
Query: 461 --SNQSPASQS----TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
N A S +DR FGI +D AT + + DD +C+ L ++S+++P E+I
Sbjct: 412 ESGNYYKAEMSNIPTSDRLFGIAFIDTATGEAKIIEFRDDSECTKLDTIMSQVKPTEVII 471
Query: 515 PANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSN 573
LS + + N L N + P SEF+ + T Y ++T N A+
Sbjct: 472 EKGNLSNLANKIVKFNSASNALFNTIKPESEFYSFDKT-------YEKLTE---NDAEYF 521
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
+ Q P +L G SA GG ++YLK LD L+ E
Sbjct: 522 ASEEQ--------WPPVLQSYYKEGKKIG--FSAFGGLVYYLKWLKLDRNLVSMGNIE-- 569
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ + + +VLD L+NLE+F N+ G GTL+ N+ +T GKR+++ WL
Sbjct: 570 ---EYNVVKSQNSLVLDGITLQNLEIFSNTFDGSDKGTLFKLFNNSITPMGKRMMKKWLM 626
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL + I +R D+V L + + AL++LPD+ER+L+R+ + S
Sbjct: 627 HPLLHKTDIEKRLDSVELLLSDGELRQI-LEDALAKLPDVERMLSRVHSCS--------- 676
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH-HILTPGKGLPAIVS 812
++++F + G E S+ +L++ ++ +L I T P +
Sbjct: 677 ---------IKVKDFERVIQGFE-------SIVGLLKSLDNFELKGAIRTFANQCPKTL- 719
Query: 813 ILKHFKDAFDWVEANNSGR------IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
++D WV A + + IIPH GV++++D + ++ +E+ L + L++ ++
Sbjct: 720 ----YQDVDSWVNAYDRKKAAVENIIIPHRGVEVEFDKSMDEINSLESELNEVLEQYKRK 775
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
++ + GK+++ +EVP ++ +P D+ ++ K RY++P ++ L +++A
Sbjct: 776 FKCKNLHFKDSGKEIFTIEVPAAISKHIPSDWIQMAANKTTKRYYSPEVQLLARSMAEAR 835
Query: 927 SEKESALKSILQRLIGQFCEHHN-KWRQMVAATAGLTLIL 965
+ + + RL +F H N W V A + I+
Sbjct: 836 ETHKVLEEDLKNRLCRKFDAHFNTSWMPTVHLIANIDCIV 875
>gi|449544351|gb|EMD35324.1| hypothetical protein CERSUDRAFT_124668 [Ceriporiopsis subvermispora
B]
Length = 1305
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 220/751 (29%), Positives = 343/751 (45%), Gaps = 78/751 (10%)
Query: 259 PVKIFGSDKLSNGFDNPVMGDVSERFSAREADK------FHFLGPDRRDAKRRRPGDVYY 312
P+K S K S G +N + +R ++A+K F FL D +D RPG+ Y
Sbjct: 309 PLKKEASSK-SVGGNNSFLTAAEQRAQQQKAEKKQSEDPFSFL-VDVKDKDGVRPGEPGY 366
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPRTLY+PP + +KQ+WE K H D V+FF+ GKF EL+E DA +G +E DL+
Sbjct: 367 DPRTLYIPPKAWNGFTPFEKQFWEIKQNHYDTVLFFQKGKFLELYEEDARIGHREFDLKL 426
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR-----RKEKG----- 421
+ + G PE +F+ K KGY+V V+Q ET E+R + KG
Sbjct: 427 TSRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAETALGAEMRLAADKKGGKGKVAAG 486
Query: 422 --SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVV 479
+KDK+V+RE+ V T GTL + ELL+ + A + +++ E + Q+ FGICV+
Sbjct: 487 DKAKDKIVRRELNKVYTNGTLVDAELLT-DEQAGHCVSIREEDDGSGKQT----FGICVL 541
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
D ATS L DD+ + L ++ +LRP E+I LS T R L+ +
Sbjct: 542 DSATSEFNLSAFEDDVCRTRLETMMRQLRPKEMIFTKGNLSVSTTR---------LLKAI 592
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+P S W T++ E + + T E LN+ + D L + + I
Sbjct: 593 LPGSCLW---TSLRESEGLTYDKTLEKLNELYPAGEDDIEMNDSPRHLNNAVPDAIREMA 649
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
+ ALG ++YL +D+ +L F + + M + +VLD L ++EV
Sbjct: 650 GHKASVEALGSMIWYLNTLNIDKDILSMKNFNV-----YDPMQRGQGLVLDGQTLAHVEV 704
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP- 718
N+ G G+L L C+T GKRL R WL PL N I R DAV L +N P
Sbjct: 705 LMNNE-GTEEGSLLKLLGRCITPSGKRLFRIWLCMPLRNVSDINARLDAVQDL--LNHPS 761
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
F EF LPD+ER+++R+ A + ++++F+ L + +
Sbjct: 762 FEQEFTSVAKGLPDLERIVSRIHAKN------------------CKVKDFLKVLSSFKTL 803
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
S L + +S+ + +L + P ++ +KH K F E N+ ++P G
Sbjct: 804 SNGLSQLAETAASFDSQTISGLL---RSAPNLLPNIKHVKAMFKAPEG-NADELVPEDGK 859
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY---VTIGKDLYLLEVPESLRGSVP 895
D YD +++ +E L LK + LG +TY KD+Y +V + VP
Sbjct: 860 DEVYDGIMEEIHGLEQELDDELKALERKLG-IKLTYWHSAQGTKDIY--QVQTRSKEKVP 916
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ S K R+ P + + L +A + +A+K RL +F + W + +
Sbjct: 917 TTWTKSGSTKAVDRWSVPALAPKIRALKEARENRNTAIKGFKNRLYAEFDADRSVWLRAI 976
Query: 956 AATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
A L + SL A L +C E+
Sbjct: 977 RVLAELDCLF---SLAKASAALGEPACRPEL 1004
>gi|366990175|ref|XP_003674855.1| hypothetical protein NCAS_0B03980 [Naumovozyma castellii CBS 4309]
gi|342300719|emb|CCC68482.1| hypothetical protein NCAS_0B03980 [Naumovozyma castellii CBS 4309]
Length = 1184
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 195/714 (27%), Positives = 342/714 (47%), Gaps = 84/714 (11%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P +++F+ + +++H+L + +DA+ R P D YDPRTL++P + +KQ+
Sbjct: 201 PATQPKAQKFNKQNEERYHWL-VNEKDAQGRAPTDPEYDPRTLHIPSSAWGKFTAFEKQY 259
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D V+FFK GKFYEL+E DA + D + G + + G PE +F
Sbjct: 260 WEIKSKMWDCVVFFKKGKFYELYEKDAFLANSLFDWKLAGGGRANMQLAGVPEMSFEYWA 319
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ V+T GTLT+G++L ++
Sbjct: 320 SQFIQYGYKVAKVDQKESMLAKEMREGSKG----IVKRELECVLTSGTLTDGDMLHSDL- 374
Query: 452 ASYLMALTE--------------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
A++ +A+ E ++ + S + FGI +D +T + L + DD +C
Sbjct: 375 ATFCLAVREEPRDFYIDEQTTFTTDSTGPSSIGKKLFGIAFIDTSTGELQLLEFEDDSEC 434
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
+ L ++S+++P EII N LS + + N + N++ P EF++ E T E+
Sbjct: 435 TKLDTIMSQVKPKEIIMEKNNLSSLANKIVKFNAAPNAIFNNIKPDQEFYNFEKTYDEL- 493
Query: 557 NIYNRITA---ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
IT E +K + N EG + S GG L+
Sbjct: 494 -----ITGNYFEDESKWPETLKNYYKEGKKIG-------------------FSTFGGLLY 529
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YLK LD+ L+ + + + + ++LD L+NLE+F NS G GTL+
Sbjct: 530 YLKWLKLDQNLISLGNIK-----EYNPIESQNSLILDGVTLQNLEIFSNSFDGTDKGTLF 584
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
N +T GKR+++ WL PL + I +R D++ L N ++LPD+
Sbjct: 585 KLFNRAITPMGKRMMKKWLMHPLLHKKDIEKRLDSIETLMN-NVELRDTIESTFTKLPDV 643
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER+LAR+ + + + +ED Q +++ +L I +
Sbjct: 644 ERMLARIHSGTLKVKDFDRVIQAFEDIVTLQ-----NSIKDFDLKGALSVYFSQIPK--- 695
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+++ ++++ +AFD ++A IIPH G++ ++D + ++E+E
Sbjct: 696 ---------------SLIDDVENWTNAFDRIKAVEENIIIPHRGIEPEFDKSLDDIQELE 740
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L L +K +++I Y GK++Y +EVP S+ +P D+ ++ K RY++
Sbjct: 741 DQLQDQLNLYKKRFKNSNIQYKDSGKEIYTIEVPVSITKQIPSDWTQMAANKSTKRYYSE 800
Query: 914 NIKKLLGELSQAESEKESALKSILQ-RLIGQFCEHHN-KWRQMVAATAGLTLIL 965
++ L +++A E AL++ L+ RL +F H+N W V + + +L
Sbjct: 801 EVRVLARSMAEAR-ELHKALENELKIRLCKKFDAHYNTTWMPTVHVISNIDCLL 853
>gi|365990916|ref|XP_003672287.1| hypothetical protein NDAI_0J01520 [Naumovozyma dairenensis CBS 421]
gi|343771062|emb|CCD27044.1| hypothetical protein NDAI_0J01520 [Naumovozyma dairenensis CBS 421]
Length = 1260
Score = 263 bits (672), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 197/709 (27%), Positives = 343/709 (48%), Gaps = 85/709 (11%)
Query: 281 SERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSK 340
S +F+ +++ +L D RDA+RR P D YDPR+LY+P + +KQ+WE KS
Sbjct: 280 SNKFNKTNEERYQWL-VDERDAQRRPPTDPEYDPRSLYIPSAAWNKFTPFEKQYWEIKST 338
Query: 341 HMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARK 397
D ++FFK GKF+EL+E DA + D + G + + G PE +F + +
Sbjct: 339 MWDCIVFFKKGKFFELYEKDALLANSLFDWKIAGGGRANMQLAGIPEMSFGYWASQFIQL 398
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
GY+V V+Q E+ E+R KG +VKRE+ V+T GTLT+G++L ++ A++ A
Sbjct: 399 GYKVAKVDQRESMLAKEMREGSKG----IVKRELECVLTSGTLTDGDMLHSDL-ATFCFA 453
Query: 458 LTE-------SNQSPASQSTD--------RCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ E SN+ + + R FG+ +D AT + + + DD +C+ L
Sbjct: 454 IREEPKTFYKSNEVRIEEEDNDTIQGLPKRLFGVAFIDTATGELQMLEFEDDDECTKLDT 513
Query: 503 LLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
++S+++P EII N LS + + + + N++ P +EF+D E T Y+
Sbjct: 514 IMSQVKPKEIIMEKNNLSSLANKIVKFNAAPHAIFNNIKPTTEFYDFERT-------YDE 566
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFL 620
+ A + + +S P IL E DSG ++ SA GG L+YLK L
Sbjct: 567 LNAGNYFEDESK-------------WPSILREYY---DSGKKIGFSAFGGLLYYLKWLKL 610
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
D+ LL + + + + ++LD L+NLE+F NS G GTL+ + +
Sbjct: 611 DQNLLTIGNIK-----EYNPIESQHSLILDGITLQNLEIFSNSFDGTDKGTLFKLFDRAI 665
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA-LSRLPDMERLLAR 739
T GKR+++ WL PL + I +R D+V L +N F ++ S+ PD+ER+LAR
Sbjct: 666 TPMGKRMIKKWLMHPLLHRCDIEKRLDSVDSL--MNDSSLRNFLESTFSKFPDLERMLAR 723
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQLH 798
+ + + +L++F+ + E + Q S+ L+ S
Sbjct: 724 IHSGT------------------IKLKDFVKVIEAFEEIVQLQESIKEYDLKGALSIYFQ 765
Query: 799 HILTPGKGLPAIVS-ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
I P +S + + DAFD ++A IIP G++ D+D + ++++E L
Sbjct: 766 QI-------PNTLSKAVSEWTDAFDRMKAVEEDIIIPESGIEPDFDKSLSDIRQLENELQ 818
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
L++ R+ +I Y GK++Y +EVP + +P ++ ++ K RY++ ++
Sbjct: 819 DLLQDYRRTFKCATIQYKDSGKEIYTIEVPVAATKRIPPNWVQMAANKSTKRYYSDEVRA 878
Query: 918 LLGELSQAESEKESALKSILQRLIGQFCEHHN-KWRQMVAATAGLTLIL 965
L +++A + + RL +F H++ W + + + +L
Sbjct: 879 LARSMAEARELHKVLEDDLKSRLCKRFDVHYDTSWMATIQVLSNIDCLL 927
>gi|170100210|ref|XP_001881323.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644002|gb|EDR08253.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1291
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 199/715 (27%), Positives = 343/715 (47%), Gaps = 79/715 (11%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+ FL D +D RRPG+ YDPRT+++P ++ + + Q+WE K H D ++FF+ G
Sbjct: 341 YSFLA-DIKDKDGRRPGEPNYDPRTIFIPKSAWKDFTPFETQFWEIKQNHYDTILFFQKG 399
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KF+EL+E DA VG + DL+ + + G PE +F+ K KGY+V VEQ ET
Sbjct: 400 KFFELYEDDARVGHQVFDLKLTSRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVEQAETA 459
Query: 411 EQLELRR-------KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQ 463
E+R E SKDK+V+RE+ V T GTL + ELL+ + A + +++ E
Sbjct: 460 LGAEMRMAATKGKASEDKSKDKIVRRELNKVYTNGTLVDPELLT-DEQAGHCISICEEGS 518
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
P++ FGICV++ +TS+ L DD+ + L LL ++RP E++ LS T
Sbjct: 519 EPSNNK----FGICVLECSTSQFNLSSFEDDVCRTKLETLLRQIRPKELVYKKGTLSVAT 574
Query: 524 ERAILRHTRNPLVNDLVPLSEFW---------DAETTVLEIKNIYNRITAESLNKADSNV 574
+R L+ ++P + W + E T+ EIK ++ ++++ D ++
Sbjct: 575 QR---------LLKSILPPACLWTGLRSVEGFNYEATLQEIKALFPPEEDDNMDDTDESL 625
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
LP + + I + ALG ++YL++ +D+ +L F +
Sbjct: 626 ------------LPSSVPDCIREMGGDQSAIEALGSMIWYLRQLNIDKDILSMKNFNV-- 671
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ M + + LD L ++E+ N+ G G+L L C+T FGKRL R WL
Sbjct: 672 ---YDPMKRGRGLTLDGQTLAHIEILLNNE-GTEDGSLLTLLRRCITPFGKRLFRIWLCM 727
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL + I R+ L+ + F F LPD+ER+++R+ A N R
Sbjct: 728 PLSDISAINARKVVQDILK--HPTFEASFTGVAKGLPDLERIVSRIHAK---NCR----- 777
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
+++F+ L + M++ S L E+ +S+ + +L + P ++ +
Sbjct: 778 ----------IKDFLKVLSAFKTMNKGFSKLADESEDFDSKTILGLL---RNAPDLLPNI 824
Query: 815 KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSIT 873
K+ + ++ E + ++P G D YD +++E+E L HLK+ +K LG
Sbjct: 825 KNVQSMYEPTEEKEADELVPQKGKDARYDEIVAEIEELEEGLEDHLKKFQKSLGIKLEYW 884
Query: 874 YVTIG-KDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
+ +G K++YL+E P S++ VP+D+ K RY +++K + +L +A + +
Sbjct: 885 HSHVGNKEIYLMETPASVKKEKVPKDWSKSGGTKAKTRYVVGSLQKTVRQLKEARENRNT 944
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
A+K+ RL +F W + + A L + SL + + SC E
Sbjct: 945 AIKAFKFRLFEEFDTDRVLWLRAIRVFAELDCLF---SLAKSSAAIGEPSCRPEF 996
>gi|390599126|gb|EIN08523.1| DNA mismatch repair protein Msh6 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1174
Score = 262 bits (669), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 205/692 (29%), Positives = 328/692 (47%), Gaps = 65/692 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D + FL D +D RPG+ YDPRTL++P + + +KQ+WE K H D V+FF+
Sbjct: 209 DPYAFL-LDPKDRDGVRPGEPGYDPRTLHIPAKAWKEFTPFEKQFWEIKQNHFDTVLFFQ 267
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF EL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q+E
Sbjct: 268 KGKFLELYEDDARIGHREFDLKLTNRVKMCMVGVPESSFNFWAAKFLAKGYKVGRVDQSE 327
Query: 409 TPEQLELRRKE-------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
T E+R KG DK+V+RE+ V T GTL + ELL + +A + +++ E
Sbjct: 328 TALGAEMRLAADKAKGGPKGKADKIVQRELNKVYTNGTLVDAELL-IDEEAGHCVSIREH 386
Query: 462 N---QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
++PA + FG+ V+D +TS L DD+ + L LL +LRP EII
Sbjct: 387 APDPENPADAKKESTFGVAVLDSSTSEFNLSAFEDDVCRTKLETLLRQLRPKEIIFTKGN 446
Query: 519 LSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
LS T R +L+ T L L + F D + T+ E+ +Y T ++ D V
Sbjct: 447 LSVSTNR-LLKATLPEGCLWTSLRDVEGF-DYDQTLKELAELYP-ATGNAMRDEDDPVG- 502
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
G + E I + + ALG ++YL++ +D+ +L F +
Sbjct: 503 ------------GDVPEAIRDMYASKPAIEALGSLIWYLRQLNIDKDILSMKNFNI---- 546
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ M + +VLD L ++EV NS G G+L L C+T FGKRL R WL PL
Sbjct: 547 -YDPMKRGQGLVLDGQTLAHIEVLRNS-DGTEDGSLLKLLGRCITPFGKRLFRIWLCMPL 604
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
I R DAV L N F F + LPD+ER+++R+ A++
Sbjct: 605 KRVEDINARLDAVQDLLD-NPSFEQMFTELAKGLPDLERIVSRIHANN------------ 651
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+++F+ L + + SSL + +S+ + +L + P + LK+
Sbjct: 652 ------CTVKDFLKVLQAFKKLSNGLSSLADVAAEFDSKMITGLL---RSAPDLTPNLKN 702
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY-- 874
+ F A SG + P G D +YD+ ++ +E +L K LK+ +G T +TY
Sbjct: 703 VQSMFK-KPAEGSGELEPMDGKDEEYDNVMSEIARLEKALEKKLKQLEDEVG-TDLTYWH 760
Query: 875 VTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
+G KD+YL++ S + ++P+ + + K R+ P + + L +A + +A+
Sbjct: 761 SALGTKDIYLVQTKASFK-NIPKQWTKHGATKAAARWTVPALAGTIRALKEARENRNTAI 819
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
K RL +F W + + A L +
Sbjct: 820 KQFKNRLFAEFDADRGVWLRAIRVLAELDCLF 851
>gi|444321562|ref|XP_004181437.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
gi|387514481|emb|CCH61918.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
Length = 1256
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 329/684 (48%), Gaps = 75/684 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+DA+ D YDPRTLY+P + +KQ+WE KSK D ++FFK GKF+EL+E
Sbjct: 303 KDAQGHEESDPDYDPRTLYIPSSAWGKFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEK 362
Query: 360 DAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA + D + G + + G PE +F + + GY+V V+Q E+ E+R
Sbjct: 363 DAILANNLFDWKIAGGGRANMQLAGIPEMSFDHWSSQFIQLGYKVAKVDQRESMLAKEMR 422
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE----------SNQSPA 466
KG +VKRE+ V+T GTLT+G++L ++ A+Y +A+ E + ++P
Sbjct: 423 EGTKG----IVKRELEYVLTSGTLTDGDMLQSDL-ATYCLAVREEPGNYYGDDDTFKTPG 477
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ + FG+ +D AT + + + DD +CS L L+S+++P E++ N LS +
Sbjct: 478 LSLSKKIFGVAFIDTATGLLEMLEFEDDSECSQLETLMSQIKPKEVLIEKNNLSNLANKI 537
Query: 527 I-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLT 585
+ + N + N L P EF+ + T E+ SN A D
Sbjct: 538 VKFNASPNAIFNYLKPEEEFFGFDKTYDELV---------------SNDPPYFATNDDW- 581
Query: 586 CLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
P +L E DS +V SA GG L+YL+ LD++L+ + + + +
Sbjct: 582 --PKVLKEYY---DSKKKVGFSAFGGLLYYLRWLKLDKSLISMGNI-----NEYNPIKSQ 631
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
++LD L+NLE+F NS G GTL+ LN VT GKR+LR W+ PL+N I +
Sbjct: 632 NSLILDGVTLQNLEIFANSFDGSDKGTLFKLLNQGVTPMGKRMLRKWVIHPLFNKSAIEQ 691
Query: 705 RQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-- 762
RQD++ L + L F LS LPD+ER+LAR+ + + K+ L+E +
Sbjct: 692 RQDSIELLLSDMELREL-FESKLSVLPDLERMLARIHSGNL-------KMKLFEKVIQGF 743
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFD 822
+ + E I L EL + L + E ++ + +K++ +AFD
Sbjct: 744 EVIVELIEQLKSFELKGALKTFLSQVPE------------------SLFNDVKNWSNAFD 785
Query: 823 WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
+A I H GV+ ++D + + + IE L L ++ ++I Y GK+LY
Sbjct: 786 RRKALEEDIIELHLGVEPEFDQSRECILSIENELNDILSGYKRRFKTSNIKYKDSGKELY 845
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EVP S+ S+P D+ S K RY++ ++ L +++A + + ++L
Sbjct: 846 TIEVPISIVKSIPSDWVQMGSTKTSKRYYSEEVRSLARSMAEARENHKIIENGLKEKLCK 905
Query: 943 QF-CEHHNKWRQMVAATAGLTLIL 965
+F + W + + + +L
Sbjct: 906 RFDLSYQTSWMPTINMISNIDCLL 929
>gi|403350104|gb|EJY74495.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1292
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 206/743 (27%), Positives = 344/743 (46%), Gaps = 112/743 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD + RRP + YDP TL++P L+N++ G +++WE KSK+ DK++F++ G+++ L+
Sbjct: 324 RDLEGRRPDEEDYDPSTLFIPDQDLKNMTPGMQKYWEIKSKNFDKIVFYRWGEWFILYYQ 383
Query: 360 DAHVGAKELDL-----QYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
D+ + +K LDL QY Q GF N+EKL GY+V V EQTET +QL
Sbjct: 384 DSVICSKILDLVIPPRQY----QKMIGFYNSQLKENIEKLVNHGYKVAVAEQTETGKQLA 439
Query: 415 LR----RKEKGSKD----KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
R + E GS KVV+RE+ + +KGT + + D Y+++ + Q
Sbjct: 440 KRVSMIKDEGGSTGDNDFKVVRREVAQIYSKGTFYNLDDGGVDYDTKYVLSYIQDQQ--- 496
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ FG C D +T + +GQ DD L ++RPVE I P+N+
Sbjct: 497 ----NNRFGFCYFDTSTLKFFIGQFDDDFTLKQFRTLCLQIRPVETIVPSNVGDKNESVM 552
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
IL+++ P + + E D E V +++ + ++ +
Sbjct: 553 ILKNSPMPPSISYLSMQELHDDEVIVQKLEKYFGQVHED--------------------- 591
Query: 587 LPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKP 645
P + LI + + + + A G ++ YL++ ET++ A F ++ +
Sbjct: 592 WPDTIKNLIFNQEKRNPLAIQAFGLSVIYLEQLLQAETIIPVADF-YTQDEHKQELMQSG 650
Query: 646 YMVLDAPALENLEVFE--NSRSGDSSGTLYAQLNH-CVTAFGKRLLRTWLARPLYNSGLI 702
MV+DA A+E+LE+ E G+ ++ L+ C T+FGKRLL+ W+ PL ++ I
Sbjct: 651 NMVIDAQAIEHLELLEIPGRSKNHGEGSFFSFLSKGCATSFGKRLLKRWVVGPLKDAVKI 710
Query: 703 RERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+R D+V+ L + V +F+K +PD+ERLL++++ S +++ K + +
Sbjct: 711 NQRLDSVSDLVREQVVRDKLQAKFKK----IPDIERLLSKIYTYS---AKSTVKAIYIDI 763
Query: 760 AAKKQLQEFISALHGCELMDQ-----------------ACSSLGAILE------------ 790
A +L EF S L EL+ Q + L A+++
Sbjct: 764 AVLNRLDEFYSLL---ELISQLIEIIEDVFDKDVIKGLKSTRLRALVQFQTEEKKKQKIQ 820
Query: 791 -----NTESRQLHHILTPGKG-------LPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
N+++ Q T GK P ILK F+D W P G+
Sbjct: 821 QRKRKNSKAAQSEDEGTQGKNEQEEQSIFPDYRPILKEFEDMITWKTIGKKKIPEPIQGL 880
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRD 897
D ++D A KV+ ++ + KH++ RK L +SI Y T Y +EVPE L VP
Sbjct: 881 DEEFDRANDKVERVKEKIEKHIEVVRKELKSSSINYSTGSMRFRYEIEVPEELTKKVPDH 940
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
Y S+ KG RY + ++++++ +L AE + + AL L+ + +F H + + V
Sbjct: 941 YTQTSTAKGRRRYQSDDLREMILQLEDAEEQFKDALVPFLREMFKKFYAHRQTFTRAVQC 1000
Query: 958 TAGLTLILLDGSLLHAFLILQSN 980
A L L A I+ SN
Sbjct: 1001 AAEL-------DCLCALAIISSN 1016
>gi|393212242|gb|EJC97743.1| DNA mismatch repair protein Msh6 [Fomitiporia mediterranea MF3/22]
Length = 1254
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 202/709 (28%), Positives = 343/709 (48%), Gaps = 76/709 (10%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D D RPG+ YDPRTLY+P + + ++Q+WE K+ H D V+FF+ G
Sbjct: 315 FDFL-RDVHDKDGNRPGEPGYDPRTLYIPKSAWKTFTPFERQFWEIKANHYDTVLFFQKG 373
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KF EL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q ET
Sbjct: 374 KFLELYEDDARIGHREFDLKLTDRVKMCMVGVPEGHFNTWAAKFLAKGYKVGRVDQAETA 433
Query: 411 EQLELR--------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
E+R + +K + DK+V+RE+ V T GTL + EL+ + A + +++ E +
Sbjct: 434 LGAEMRLAADKKLDKPKKEAGDKIVRRELNKVYTNGTLVDAELI-VDDQAGHCVSIRELD 492
Query: 463 QSPASQSTDR-CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSP 521
+DR FG+CV+D +TS L DD + L +L +LRP E++ LS
Sbjct: 493 -----PDSDRGSFGVCVLDSSTSEFNLSAFGDDACRTKLETMLRQLRPKELLFTKGNLSV 547
Query: 522 ETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG 581
T R L+ ++P S W T + E++ + T + L + + EG
Sbjct: 548 STTR---------LLKAVLPGSCIW---TGLREVEGFGFKETMDELKNLYPDGEDDMEEG 595
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM 641
+P + E++++ + ALG ++YL++ +D+ +L F + + M
Sbjct: 596 ---ANIPDAIKEMLTS----ETAVIALGAMIWYLRQLNIDKDILSMKNFNI-----YDPM 643
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
+ +VLD L ++EV +NS G G+L L C+T FGKRL R WL PL
Sbjct: 644 KRGQGLVLDGQTLAHVEVLQNSE-GTDEGSLLRILQRCITPFGKRLFRIWLCVPLREVSA 702
Query: 702 IRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA 760
I R DAV L ++ P F +F + +PD+ER+++R+ A +
Sbjct: 703 INARLDAVQDL--IDHPTFEHDFTQLAKGIPDLERIVSRIHAKN---------------- 744
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDA 820
++ +F+ L + + SL + SR++ +L + P ++ +KH +
Sbjct: 745 --CKVNDFLKVLSSFKRLSNGLESLSETADTFNSREISGLL---RSAPNLIPNIKHVESM 799
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY---VTI 877
F ++ ++P G D YD +++EIE SL LK+ K LG ++Y T
Sbjct: 800 F--LQPEGGPDLLPKNGKDETYDGIEGEIQEIEESLDAELKKLEKKLG-CKLSYWHSATG 856
Query: 878 GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
KD+YL+E S+ +VP+++ +S K R+ P++ + + +L + + +A+K
Sbjct: 857 TKDIYLVETKASV-SNVPKNWIRQSKTKAVCRWQVPDLAQAIRQLKEERERRTAAIKDFK 915
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
R+ +F + + W + + A L + SL + L + +C E
Sbjct: 916 FRVFAEFDKDRDVWLRAIRTLAELDCLF---SLAKSSLAIGEPACRPEF 961
>gi|328866749|gb|EGG15132.1| mutS like protein [Dictyostelium fasciculatum]
Length = 1168
Score = 259 bits (661), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 202/701 (28%), Positives = 330/701 (47%), Gaps = 71/701 (10%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
++F FL + +D + G YDPRTLY+PP L + ++Q+WE K K+ D V+FFK
Sbjct: 205 ERFEFL-VNLKDENQIPFGHEGYDPRTLYIPPVKLSTFTPFERQFWEIKMKNYDTVVFFK 263
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G ++ L+ + G PE +F+ K +GY+V V+Q E
Sbjct: 264 KGKFYELYENDADIGNEKFGLKMTDRVNMRMVGVPEASFTTWAAKFIDQGYKVAKVDQME 323
Query: 409 TPEQLELRRKEK-GSKDK---VVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
+ + R+K+ GS DK +++R++ +V+T GTL + LL+ ASYLMA+ E +
Sbjct: 324 SSYGMAKRQKQDGGSADKTKSIIQRQLVSVLTLGTLVDENLLTEQT-ASYLMAIKEDDY- 381
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
++ +C VD + DD + + L +L + P EII S T
Sbjct: 382 ------NKILAVCFVDTSVGLFYTTSFKDDENRTQLETILLQTMPKEIIVEKTGYSNTTM 435
Query: 525 RAILR--HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ I R + ++N PL E+W A + +
Sbjct: 436 QLIKRILSRQRHIINQRTPL-EYW-----------------------APDQIQGAIKANQ 471
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
GL I+++ ++SA+G L YL + E +++ A++E G
Sbjct: 472 GLPIPAEIVND--------EMMMSAVGACLSYLFDIKIGEDMVKQARYEQYNSQASGGSG 523
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
+VLD L NLE+F N+ G G+LY L+ C T FGKRLLR W+ RPL + I
Sbjct: 524 GA--LVLDGQCLINLEIFNNTTDGGKEGSLYKVLDRCQTGFGKRLLRQWVCRPLADIHRI 581
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA--------SSEANGRNSNKV 754
+R DAV L G N +++PD+ER ++R+ A +S N + +
Sbjct: 582 NDRLDAVDAL-GNNSDIFASLAGMFNKMPDIERTISRIHARSSNVASLTSVLNTLETCQQ 640
Query: 755 VLYEDAAKKQLQEFISALHGCELM---DQ-----ACSSLGAILENTESRQLHHILTPGKG 806
++ + K + S L LM DQ ++ +++ ++ G
Sbjct: 641 IISDIDYKSNTELSKSKLLANYLMVAEDQDEDIEMKKDNDGYDDDDDNKNQSDLVRNNVG 700
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + +K +D+F + A S + P G DYD+ +V IE L ++L+EQRK
Sbjct: 701 FPNLKKKIKFIRDSFSFDSATQS--LTPKPGRFKDYDAGQIEVDSIEKKLDEYLEEQRKF 758
Query: 867 LGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+ I Y +GK++Y LE+P S+ R + ++Y L+S K F R+ TP I++ +L
Sbjct: 759 FKTSGIVYKHMGKEIYQLEIPVSVLNRVKITQEYSLKSDSKTFKRFHTPYIEQKSKDLLA 818
Query: 925 AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
A E K++ ++ F + H W+Q V A + ++
Sbjct: 819 ARDYLEVTRKTVFVQIQELFNQFHLDWQQAVQCLAHIDCLM 859
>gi|405123347|gb|AFR98112.1| DNA mismatch repair protein msh6 [Cryptococcus neoformans var.
grubii H99]
Length = 1213
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 213/745 (28%), Positives = 363/745 (48%), Gaps = 72/745 (9%)
Query: 231 RKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPV-MGDVSERFSAREA 289
RK + K S S ++ + P KP+ GS+ SN F + + RE+
Sbjct: 212 RKIAKAKAKPSASSKKTISTPVR-PGPKPIANKGSE--SNSFLTAAERKKIQAKEDKRES 268
Query: 290 DK-FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
++ F FL + RD RP D YD R++ +P + +KQ+WE K H D V+FF
Sbjct: 269 EQCFDFL-VNIRDKDGNRPDDPDYDKRSILIPKKSWTEFTPFEKQFWEIKQNHYDTVLFF 327
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
+ GKFYEL+E DA +G +E DL+ + + G PE++ + K G++V +V+Q
Sbjct: 328 QKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPEQSLEFWIAKFLGAGHKVGIVDQA 387
Query: 408 ETPEQLELRRK--EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
ET +E+R K +K ++V+RE+ V T GT+ +G L+++ D ++L+++ ES+ P
Sbjct: 388 ETAIGMEMRTKAGQKSGGREIVRRELARVFTNGTIVDGGYLNSD-DPNHLVSIKESSSGP 446
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ FGIC+ D +T + DD+ + L + ++RP E+I LS T R
Sbjct: 447 EGTSS---FGICIADASTGEFSISFFEDDVCRTRLETMFRQIRPKELIHAKGNLSVMTTR 503
Query: 526 AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE-SLNKADSNVANSQAEGDGL 584
L+ +++P S W + K+ TAE +LN S ++ + EG
Sbjct: 504 ---------LLRNILPSSTAWQS------FKDGKEFYTAEDTLNLLPSIFSSEEGEG--- 545
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
I +IS D+ + +LGG LFYLK LD+ L F + + + +
Sbjct: 546 ----AIPEAIISLQDN-DLAMESLGGMLFYLKSLNLDKDLFSQRNFNI-----YDPIKEG 595
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
++LD L ++EV N+ G + GTL L CV+ GKRL + WL PL ++ I
Sbjct: 596 KNLILDGKTLGHMEVLVNNEGG-TEGTLAELLQRCVSPSGKRLFKVWLRSPLRDADAINA 654
Query: 705 RQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
R DAV L +N P F+ +F + LPD+ERL++R+ A S + S+ + + E +K
Sbjct: 655 RLDAVEDL--MNHPRFSGDFTQLCKGLPDLERLISRIHAGSV---KQSDLLQVVESFSK- 708
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDW 823
LQ+ I L+D + E+ ES + +L + P + ++KH + +
Sbjct: 709 -LQKGID-----NLIDMS--------ESLESTGVKALL---RSAPDLSGMIKHIRGMYTI 751
Query: 824 VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY---VTIGKD 880
+ + I+P+ G D + D+A +V+ IE L L+ +K L + GK+
Sbjct: 752 EQNEKTIAILPNPGADEECDAADAEVERIEEELNDTLEHVKKTLKCKEAVFWHSAQGGKE 811
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
++ +++P S++ P + S K RY+TP ++ ++ +A + +A K+ + L
Sbjct: 812 IFQIQLPASVKA--PARWTKASGTKSHNRYYTPETIPVIRQIQEARETQAAAKKNFFKHL 869
Query: 941 IGQFCEHHNKWRQMVAATAGLTLIL 965
+ +F + W V A L ++
Sbjct: 870 MEEFSKDRETWLTTVRVVAELDCLV 894
>gi|440795533|gb|ELR16653.1| MutS domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 1266
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 211/689 (30%), Positives = 337/689 (48%), Gaps = 72/689 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
DA+RR YDP TL++P L+ Q+Q+W KSK+ D ++FF++GKF+EL+ D
Sbjct: 324 DAERRPRTHPNYDPSTLFIPKSEFARLTPAQQQYWLIKSKNWDSLVFFRVGKFFELYNKD 383
Query: 361 AHVGAKELDLQYM------KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
A +G K DL+ + CG P N + + KL G++V++V++TET +
Sbjct: 384 ADLGNKLFDLKLVIKPTRGGSNMRQCGVPVPNLQIWLAKLVALGHKVVIVDETETSVGAK 443
Query: 415 LRRKE----------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES-NQ 463
+R+++ K D +V R++ V+T GT+ + L++ + A+Y++++ E
Sbjct: 444 VRQRQGDGNWKKAVAKSRTDGLVDRQVKQVLTAGTIVDEGLMNDH-RANYILSIKEDIIP 502
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
P S++ + +GIC VD TS LGQ +DD + + L LL LR +KP+ +L +T
Sbjct: 503 DPESRTEEVTYGICFVDCTTSEFNLGQFVDDSERNQLETLL--LR----VKPSEILYEKT 556
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+ I R PL++ P F A+ TV ++ +N + N AD + A D
Sbjct: 557 LQLIKRSVVCPLMSAREP---FLGADATVEYVQQ-HNVFVGQ--NDADEHPA-----ADD 605
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
L+ P +L E G S + + F+ K LD L KF +G ++
Sbjct: 606 LSAWPPVLLEHHEAGASLALSALSGLLVYFHELK--LDHLALA-RKFNHYTPAGSNELD- 661
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
++VLD L NLE+FEN+ +GTL ++HCVT FGKRL + W+A+PL I
Sbjct: 662 --HLVLDGKTLTNLEIFENNFDKGVAGTLLNVMDHCVTPFGKRLFKRWIAKPLRRVEDIE 719
Query: 704 ERQDAVAGLRGVNQPFALEFRKA----LSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
+R +AV L +P E R A L LPD+ER ++R+ A GR + +
Sbjct: 720 DRLNAVEDLN--ERP---ELRDALWEQLKSLPDLERAISRIHA-----GRATTLQFISVL 769
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
A Q+ E + E+ Q +S+ L I+ G+P +L +F D
Sbjct: 770 EAFYQIWETWNNHFKEEVFTQ-----------FKSKHLQSIVI--IGIPDYSEVLGYFCD 816
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
AFDW A +I P+ GVD+ YD + ++E L ++L +QRK G S+ Y T K
Sbjct: 817 AFDWQVAKERKQITPNPGVDLGYDEVRDNIADLEQQLEEYLDQQRKRFG-VSMHYTTSEK 875
Query: 880 DLYLLEVP--ESLRGSVPR-DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
YL+EVP E+ P+ ++ R K R + L+ ++ +A+ +S L +
Sbjct: 876 KDYLIEVPVGEAEGVDFPKNEFVERKGTKAVIRLQATRVAGLVPKIEEAKDALDSYLAGV 935
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L + + F +H W V A L +L
Sbjct: 936 LTQYLATFGQHFAVWSAAVTCVAELDCLL 964
>gi|71018553|ref|XP_759507.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
gi|46098995|gb|EAK84228.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
Length = 1716
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 217/719 (30%), Positives = 339/719 (47%), Gaps = 73/719 (10%)
Query: 282 ERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH 341
+R A + + FL D RD RPGD YD RT+Y+P ++ + ++Q+WE K H
Sbjct: 340 KRKKADNEEAYSFL-LDLRDRDGNRPGDAEYDSRTVYIPKSAWKDFTPFERQFWEIKQNH 398
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYR 400
D V+FF+ GKFYEL+E DA +G +E DL+ + + G PE +F + K GY+
Sbjct: 399 WDTVLFFQKGKFYELYEEDALIGHREFDLKLTDRVKMKMVGVPEASFDIFAAKFLALGYK 458
Query: 401 VLVVEQTETPEQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLM 456
V V+QTET +R + +G ++V RE+ V+T GT+ + L PD +Y +
Sbjct: 459 VGRVDQTETAVAKGMRVGERSRGGGSEIVNRELRHVLTSGTIVDAASL---PDDLNNYCV 515
Query: 457 ALTESNQSPASQSTDR---CFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
++ E S +T R FG+C +D AT+ L + DD + L LL LR E++
Sbjct: 516 SIKE------SATTGRNGPIFGVCTLDAATAEFNLTEFEDDESRTRLETLLRSLRLKEVL 569
Query: 514 KPANMLSPETERAILRHT--RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
L+ T R +LR T + L P EF + ETT+ ++ ++N
Sbjct: 570 HEKGGLTAPTLR-VLRSTVPSTAQITMLKPGLEFLEPETTLRKLNALFN----------- 617
Query: 572 SNVANSQAEGDGLTCL-PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+++A D L + P +L E I++ +SALGG L YL + LD L F
Sbjct: 618 -PDVDAEARLDSLDAVDPSLLPEGIASMVHRPCAMSALGGMLCYLAQLNLDRDLCSSRNF 676
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ F + + +VLDA +L +L V +N G GTL+ LN CVT FGKRL +
Sbjct: 677 NI-----FDPLHQDKCLVLDAQSLTHLNVLQNDE-GTDEGTLHRLLNRCVTPFGKRLFKI 730
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
WL PL + I RQDAV L N F +F LPD+ER++ R+
Sbjct: 731 WLVAPLATADAINARQDAVEDLLK-NPCFGDQFETFGKALPDIERIVPRV---------- 779
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
A K + ++F + L ++A L E + + +L K +PA+
Sbjct: 780 --------RAGKCRPRDFTAVLKSLGHFEKAIKQLRNQCEGFSTDVMDGLL---KSVPAV 828
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL--LG 868
+I + + +F E G P G YD A + E+EA L ++ RK L
Sbjct: 829 SAIARELQSSFKVTE---DGSFTPIEGAFELYDRAEAAIAEVEAQLEHEIESYRKQLKLN 885
Query: 869 DTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
+ +G KD++ +EVP + + VP ++ S K R+++P ++ L+ E+ +A
Sbjct: 886 PVKCAWKHLGTKDIFQIEVPVATK--VPSNWTKLSGTKDRNRWYSPKVRDLVQEIKEARE 943
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ + LK Q L F E + + + V A + +L SL A + SC E+
Sbjct: 944 TRLATLKQFHQSLFASFSEQSDVFLRAVKTIAEIDCLL---SLAKASYAIGEPSCRPEL 999
>gi|402222110|gb|EJU02177.1| hypothetical protein DACRYDRAFT_21918 [Dacryopinax sp. DJM-731 SS1]
Length = 975
Score = 257 bits (656), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 211/685 (30%), Positives = 332/685 (48%), Gaps = 76/685 (11%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D D +RPG+ YDPRT+++P + + + +KQ+WE K H D V+ F+ G
Sbjct: 46 FEFL-KDVHDKTGKRPGEDGYDPRTIFIPKNAWASFTPFEKQFWEIKQNHYDTVLMFQKG 104
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYEL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q ET
Sbjct: 105 KFYELYEQDAEIGHREFDLKLTDRVKMKMVGVPESSFNFWAAKFLAKGYKVGRVDQVETQ 164
Query: 411 EQLELRRKEK-----GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
E+R + GS ++V+RE+ V+T GTL + EL+ + +A + +++ E
Sbjct: 165 LGAEMRVAKHGNSSGGSGKEIVRRELNKVLTNGTLVDPELM-VDDEAGHCVSIKEGK--- 220
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ FGIC +D AT L DD + L ++ +LRP E++ + LS T R
Sbjct: 221 -----NNTFGICTLDAATGEFNLCCFEDDACKTRLETVMRQLRPKEVVHCTDNLSISTIR 275
Query: 526 AILRHTRNP---LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
L T P L L P E W E T+ E+ N+Y A N ++S +G
Sbjct: 276 --LLRTVVPGSCLWTALKPSLESWSYERTLDELVNLY---------PATQNDSSSVIQGR 324
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
L+ LP + +++ + ALGG ++YL + + + LL F + + M
Sbjct: 325 DLSGLPPAIRTVVTE----VTAVEALGGMIWYLGQLNVGKDLLTMRNFNI-----YDPMR 375
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
+ +VLD L ++EV NS S D GTL LN CVT FGKRL R WL PL I
Sbjct: 376 RGMGLVLDGQTLAHIEVLVNSESTD-EGTLLNLLNRCVTPFGKRLFRIWLCMPLREVKAI 434
Query: 703 RERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
R DAV L +++P F F K LPD+ER+++R+ A + ++ K++ A
Sbjct: 435 NARLDAVDDL--MSRPSFEATFGKLSRGLPDLERMVSRVHART-CKTKDFEKLI----EA 487
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTE--SRQLHHILTPGKGLPAIVSILKHFKD 819
+Q+Q S L E D + S+G +L + S L HI +G + H KD
Sbjct: 488 FRQVQRGFSDL-AEEADDFSSRSIGDLLSSAPDLSPHLRHI----QG-------MYHVKD 535
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY--VTI 877
+ P G D DY+ ++ +EA L + L +K L +++ Y +
Sbjct: 536 DL----------LYPVQGADSDYEQVQAEIDRLEARLQEDLDSLKKKLNFSNLVYWHSPL 585
Query: 878 G-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
G K++YL+E P S +G +P+ + K R+ P++ + +L +A + +K
Sbjct: 586 GTKEIYLVEAPSSFKG-IPKGWTKGGGTKAVHRWQVPDLMSTIRKLKEARETLKEVIKQY 644
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGL 961
+L +F + + W + V A L
Sbjct: 645 KLKLFNEFDQDRDIWLRAVRVVAEL 669
>gi|392574726|gb|EIW67861.1| hypothetical protein TREMEDRAFT_40008 [Tremella mesenterica DSM
1558]
Length = 959
Score = 255 bits (652), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 203/693 (29%), Positives = 337/693 (48%), Gaps = 72/693 (10%)
Query: 285 SAREADK-FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
+ R+A++ + FL P+ +DA+ RRP D YD RTLY+P + R + ++Q+WE K H
Sbjct: 14 AKRDAEESYKFLLPENLKDAEGRRPSDPDYDGRTLYIPKEDWRGFTPFERQFWEIKQNHY 73
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-EQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FF+ GKF+EL+E DA +G + DL+ K + G PE++F K GY+V
Sbjct: 74 DTVLFFQKGKFFELYEGDAQIGHDQFDLKLTKRVKMQMVGVPEQSFDEFAAKFLAHGYKV 133
Query: 402 LVVEQTETPEQLELRRKE-KGS----KDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
VEQ ET ELRR KGS +DK+V+RE+ + T GT+ +G LS + ++++ +
Sbjct: 134 GKVEQVETAIGAELRRNAGKGSSTLKEDKIVQRELAQIFTNGTIVDGAYLSTH-ESNHCV 192
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
A+ E + +G+CV+D +T L + DD+ + L L ++RP E++
Sbjct: 193 AVKEQVDPNGTV----VYGVCVLDASTGEFQLTALEDDVLRTKLGTLFRQIRPKELLHAK 248
Query: 517 NMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
LS T R +LR+ P L D EF+ T+ E+ ++
Sbjct: 249 GNLSSPTLR-LLRNISPPNVLWQDFKDGVEFYPVAKTLEELGKLF--------------- 292
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
+ EGD L + L I T + + ALGG LFYL+ LD+ L+ F +
Sbjct: 293 ---EVEGD-LADMKATLPNAIKTMLNEPLAIEALGGMLFYLRSLNLDKDLVSQGNFTIFD 348
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+ G + ++LD +L ++E+ N+ G GTL + L +CVT GKRL R W+
Sbjct: 349 PTREGKV-----LILDGQSLGHMEILINNEGG-HEGTLLSLLQNCVTPSGKRLFRMWITA 402
Query: 695 PLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL I +R DAV + ++ P FA F + LPD+ERL++R A S
Sbjct: 403 PLCEVRAINDRLDAVDDI--MHHPDFAGMFTSSFKNLPDLERLVSRAHAGS--------- 451
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSI 813
+ ++F++ + G + + +L + + + + +L +G P + +
Sbjct: 452 ---------MRQKDFLTIIEGFQTVSSTLKTLVSSSSSFSTSPVPDLL---RGAPDLNPL 499
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL----GD 869
L+H + + V+ + I+P G D + D A V E E L + ++ RK L G+
Sbjct: 500 LQHMRTLYHVVQEGKTIDILPTQGSDRECDQADANVAEQEGILEQLREKARKQLHLARGE 559
Query: 870 TSITYVTI-GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESE 928
+ + GK++Y L+V + VP + +S K RY+ I ++ +L +
Sbjct: 560 IAYWHSNQGGKEIYQLQVAADV--EVPSSWRKQSGTKTVSRYYNSEITPVIRKLQEEREM 617
Query: 929 KESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
+ A K+ +RL+ +F + +W V A L
Sbjct: 618 QSVAKKTFFRRLLQKFDQSRREWLNAVKTVAEL 650
>gi|392562069|gb|EIW55250.1| DNA mismatch repair protein Msh6 [Trametes versicolor FP-101664
SS1]
Length = 1247
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 215/716 (30%), Positives = 335/716 (46%), Gaps = 71/716 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD RPG YDPRTLY+PP + + +KQ+WE K H D ++FF+
Sbjct: 289 DPFSFL-VDVRDKDEVRPGQPGYDPRTLYIPPRAWTSFTPFEKQFWEIKQNHFDTILFFQ 347
Query: 350 MGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF EL+E DA VG +E DL+ + + G PE +F+ K KGY+V V+Q E
Sbjct: 348 KGKFLELYEEDARVGHREFDLKLTQRVKMSMVGVPEMSFNFWAAKFLAKGYKVGRVDQAE 407
Query: 409 TPEQLELR-----------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
T E+R K+KG KDK+V+RE+ V T GTL + ELL+ + A + ++
Sbjct: 408 TALGAEMRLAADKKNKKEPAKDKG-KDKIVRRELNKVYTNGTLVDEELLT-DEQAGHCVS 465
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ E + + FGICV+D ATS L DD+ + L ++ +LRP EII
Sbjct: 466 IREEEAVETDKDGKQTFGICVLDSATSEFNLSAFEDDICRTKLETMMRQLRPKEIIFTKG 525
Query: 518 MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI-YNRITAE--SLNKADSNV 574
LS T R L+ ++P + W T++ E + YN E L AD +
Sbjct: 526 NLSVSTTR---------LLKSILPGNCLW---TSLRESEGFKYNEAIKELKKLYPADEDD 573
Query: 575 ANSQAEGDGLT-CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
GLT +P + ++ + ALG ++YL +D+ +L F +
Sbjct: 574 DEMADNPHGLTKAVPEPIRRMLPH----QGAIQALGSMIWYLHTLNIDKDILSMKNFNV- 628
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ M + +VLD L ++EV +N+ G GTL L C+T GKRL R WL
Sbjct: 629 ----YDPMKRGQGLVLDGQTLAHVEVLQNN-EGTEEGTLLKLLGRCITPSGKRLFRIWLC 683
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL I R DAV L + P F +F LPD+ER+++R+ A +
Sbjct: 684 MPLREVKDINARLDAVQDL--LEHPTFEKDFTAIAKGLPDLERIVSRIHAKN-------- 733
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
++++FI L + + S+L ++ +S+ + +L + P +
Sbjct: 734 ----------CKVKDFIKVLGAFRSLSKGLSALAETADSFDSKSIPGLL---RTAPDLTP 780
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTS 871
LKH + F E + S + P G D YD +++ E+E L LK+ RK G D +
Sbjct: 781 NLKHIQAMFKPPE-SGSDELCPEDGKDEVYDGIMEEINELENELKSELKKLRKQTGLDLT 839
Query: 872 ITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
+ G K++YL++ R P+ + L S K R+ P ++ + ++ +A +
Sbjct: 840 YWHSAQGTKEIYLVQTQGKERDKAPKGWTLSGSTKAAKRFIVPALQTTIRKVKEARENRN 899
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+A+K RL +F + W + + A L + SL A L +C E+
Sbjct: 900 TAIKEFKNRLYAEFDLDRSVWLRAIRVLAELDCLF---SLAKASSALGEPACRPEL 952
>gi|118368049|ref|XP_001017234.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89299001|gb|EAR96989.1| MutS domain III family protein [Tetrahymena thermophila SB210]
gi|311992449|gb|ADQ26782.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1232
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 192/736 (26%), Positives = 347/736 (47%), Gaps = 116/736 (15%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D+K+R+ D YDP TLY+PP+ L+ + +Q+WE KS + DK++FFK+GKFYELF D
Sbjct: 239 DSKKRKRTDPNYDPTTLYVPPESLKQFTPVMRQYWEIKSTNFDKILFFKLGKFYELFYED 298
Query: 361 AHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK 420
A + KELDL +M G++ H GFPE+ KL GY+V V EQTETPEQ++ R +
Sbjct: 299 ALITHKELDLNWM-GKKMHTGFPEKALDKMASKLISLGYKVAVAEQTETPEQMKQRLMRE 357
Query: 421 GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVD 480
S K V RE+ V+TKGT + P YLM+L ++ FGI +V+
Sbjct: 358 KSGPKCVSRELVQVMTKGTYDQNNETDYQP--RYLMSL---------RNFQTKFGIIIVE 406
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV 540
+T+ I + + DD+ + LL +++P EI+ + ++ + ++ I P ++ L
Sbjct: 407 SSTNVITVAYLNDDIHFTQFKTLLCQVKPQEIVYDPDNMTHDIKKIIQSGYLAPQLSPLQ 466
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS 600
++ W+ YN L+K +V + P +L+ L +T ++
Sbjct: 467 NKNDNWNKGMA-------YNH-----LDKTHGDVLEGK--------WPKLLNNLYNTEET 506
Query: 601 GSQ-VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
+ ++ G YLK + + ++ A++++ + + M+LD+ +L++LE+
Sbjct: 507 KRDLIFESMAGLFNYLKSILILDQVISVARYQIYDI----EKGVRSCMILDSQSLQHLEI 562
Query: 660 FENSRSGDSS-----------GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
++S S+ G+L +N T FG R+L+ W+ PL + I +R DA
Sbjct: 563 LDSSSGPVSTQKENYKLHFDDGSLLGYINKTKTPFGYRMLKNWICAPLMDINKIYDRYDA 622
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
+ L+ N F + + +LPD+E++ R++ S +N N VV +ED + +L+EF
Sbjct: 623 IEDLQKFNSERDT-FLRGIEKLPDLEKMCGRIYKYS-IRQQNQN-VVYFEDFSYSRLKEF 679
Query: 769 ---ISALHGCELMDQACSSLGAILENTESRQLHHILTPGK---------GLPAIV----- 811
+ L E + + + L + +S++L ++TP LPA++
Sbjct: 680 KDLTTKLAESEKLIK--THLTPFADQFKSKRLRKLVTPNTIDHEDEEEYELPAMIYHGYS 737
Query: 812 ----------------------------------------SILKHFKDAFDWVEANNSGR 831
++ F++ W +
Sbjct: 738 DEEDEVEENINQHAAKAEKMEIENKQSKKSKSSGLLPPASKYIQEFQNYIVWQGPKGQEK 797
Query: 832 IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL- 890
+P G+ YD A + V+ +E L +L + ++ + D +I Y Y LE+ E L
Sbjct: 798 PLPKKGLVNSYDLATEAVQNVEKKLQNYLVQIQQQMKDKTIKYGL----RYELEINEDLV 853
Query: 891 RGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
+G+ P++++ S + R+ T +++L+ EL +AE ++ LK + + +F E +
Sbjct: 854 KGNKKPKNFDFTSKAGKYQRFQTKELRELIAELDEAEDVQKKELKEFCRFIFKEFYESYK 913
Query: 950 KWRQMVAATAGLTLIL 965
W ++ A L ++
Sbjct: 914 TWDTLINILAELDCLI 929
>gi|353241684|emb|CCA73482.1| related to MSH6-DNA mismatch repair protein [Piriformospora indica
DSM 11827]
Length = 1265
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 207/710 (29%), Positives = 332/710 (46%), Gaps = 82/710 (11%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D RD RRP D YDPR+LY+P + + + + Q+WE K H D ++FF+ GKFYEL+
Sbjct: 319 DVRDKDNRRPTDEGYDPRSLYIPKEAWKEFTPFETQFWEIKRDHYDTILFFQKGKFYELY 378
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G + DL+ + + G PE +F K +GY+V VEQ ET E+R
Sbjct: 379 EDDARIGHQLFDLKLTSRVKMSMVGVPESSFDFWANKFLARGYKVGKVEQAETSIGAEMR 438
Query: 417 ---RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL--------TESNQSP 465
KG ++VKR + V T GTL +GE L + +AS+ +++ E + +
Sbjct: 439 AAAGAGKGKGKELVKRVLNKVFTTGTLMDGEYL-IDEEASHCVSIRVRLSAAQNEQSLTA 497
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + FG ++D +TS L DD+ + LL +LRP E+I LS T R
Sbjct: 498 LKEQGESKFGFAILDSSTSEFKLCSFEDDVCRTRTETLLRQLRPKEVI---GNLSVSTNR 554
Query: 526 AILRHTRNPL-----VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
+ +N L + L P+ F D +TT+ E+ ++Y S +
Sbjct: 555 LL----KNVLPGSCAITSLRPVEGF-DYQTTLKELSSLYP-----------SPEDDDDGS 598
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
G G +P + +I G+ + ALG ++YL+ +D LL F + +
Sbjct: 599 GAG---MPEAIRSMI--GEEAPII--ALGAMIWYLRTLNIDAALLSAKNFNI-----YDP 646
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
M + +VLD L ++EV NS G GTL L CVT FGKRL R WL PL
Sbjct: 647 MRRGEGLVLDGQTLAHIEVLMNS-DGSDDGTLLKLLGRCVTPFGKRLFRIWLCTPLREIK 705
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA 760
I +R DAV L + F EF + +PD+ER+++R+ A +
Sbjct: 706 QINDRLDAVEDLMR-HDTFEKEFTDLVRGMPDLERIVSRIHAGT---------------- 748
Query: 761 AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL-PAIVSILKHFKD 819
++++F+ L + ++ S L +++ + +L L P + ++ F
Sbjct: 749 --CKVKDFLKVLESFKKLNNGLSGLAEKASCFDTQTVAGLLRSAHDLKPYLKAVRGMFVP 806
Query: 820 AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY---VT 876
+N++ +IP GVD +YD+ K++ +IE L + L K L D + + T
Sbjct: 807 P-----SNDNFELIPEDGVDEEYDTIAKEIHDIETDLEQRLARLAKKL-DIKLEFWHSAT 860
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
KD+YL++V + SVP+D++ ++ K R+ P+ + +L +A ++ +K
Sbjct: 861 GTKDIYLVQVNAPDKKSVPKDWQKQNDTKAKARFMVPDFAGPIRKLKEARETMKTVVKGF 920
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
RL F + W + V TA L +L SL A + S SC E
Sbjct: 921 TSRLYAAFDADRDVWLRTVRVTAELDCLL---SLAKASAAIGSPSCRPEF 967
>gi|58260898|ref|XP_567859.1| mismatch repair-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229940|gb|AAW46342.1| mismatch repair-related protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 1205
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 208/721 (28%), Positives = 353/721 (48%), Gaps = 71/721 (9%)
Query: 255 PIIKPVKIFGSDKLSNGFDNPV-MGDVSERFSAREADK-FHFLGPDRRDAKRRRPGDVYY 312
P KPV GS+ SN F + + RE+++ F FL + RD + RP D Y
Sbjct: 227 PGPKPVANKGSE--SNSFLTAAERKKIQAKEDKRESEQCFDFL-VNIRDKEGNRPDDPDY 283
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
D R++ +P + +KQ+WE K H D V+FF+ GKFYEL+E DA +G +E DL+
Sbjct: 284 DKRSILIPKKSWAEFTPFEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKL 343
Query: 373 M-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSKDKVVKR 429
+ + G PE++ + K G++V +V+Q ET +E+R K +K ++V+R
Sbjct: 344 TDRVKMKMVGVPEQSLEFWIAKFLGAGHKVGIVDQAETAIGMEMRTKAGQKTGGREIVRR 403
Query: 430 EICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
E+ V T GT+ + L+++ D ++L+++ ES+ SP S+ FGIC+ D +T +
Sbjct: 404 ELARVFTNGTIVDSGYLNSD-DPNHLVSIKESSGSPEGISS---FGICIADASTGEFSIS 459
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
DD+ + L + ++RP E+I LS T R L+ +++P S W
Sbjct: 460 FFEDDVCRTRLETMFRQIRPKELIHAKGNLSVTTTR---------LLRNILPSSTAWQ-- 508
Query: 550 TTVLEIKNIYNRITAE-SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+ + K Y TAE +LN S +N Q G T +P E I++ + + +L
Sbjct: 509 -SFRDGKEFY---TAEDTLNLLPSIFSNEQ----GQTTIP----EAITSLQDNALAMESL 556
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
GG LFYLK LD+ L F + + + + ++LD L ++EV N+ G
Sbjct: 557 GGMLFYLKSLNLDKDLFSQRNFNI-----YDPIKEGKNLILDGKTLGHMEVLVNNEGG-I 610
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKAL 727
GTL L CV+ GKRL + WL PL ++ I R DAV L +N P F+ +F +
Sbjct: 611 EGTLAELLQRCVSPSGKRLFKVWLRSPLRDADAINARLDAVEDL--MNHPRFSGDFTQLC 668
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
LPD+ERL++R+ A S KQ +F+ + + + +L
Sbjct: 669 KGLPDLERLISRIHAGS-----------------VKQ-SDFLQVVESFSKLQKGIDNLID 710
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E+ ES + +L + P + +++H + + + + I+P+ G D + D+A
Sbjct: 711 MSESLESTGVKALL---RSAPDLSGMIQHIRGMYTIEQNEKTIAILPNPGADEECDAADA 767
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITY---VTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+V+ IE L + L+E +K L + GK+++ ++VP S++ P + S
Sbjct: 768 EVERIEEELNEILEEVKKTLKCKEAVFWHSAQGGKEIFQIQVPASVKA--PARWTKASGT 825
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K RY+TP ++ ++ +A + +A K+ + L+ +F + W V A L +
Sbjct: 826 KSHNRYYTPETIPVIRQIQEARETQAAAKKNFFKHLMDEFSKDRETWLITVRVIAELDCL 885
Query: 965 L 965
+
Sbjct: 886 V 886
>gi|302416361|ref|XP_003006012.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
gi|261355428|gb|EEY17856.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
Length = 1193
Score = 248 bits (632), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 201/715 (28%), Positives = 337/715 (47%), Gaps = 114/715 (15%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
+D++ +L + D R+ PGD Y+P ++Y+PP S +KQ+W K D ++FF
Sbjct: 290 SDRYPWLA-NITDIDRKSPGDPEYNPSSIYIPPGAWNKFSPFEKQYWAIKQNLWDTIVFF 348
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
K GKF+EL+E DA +G + D + + G PE + M V + KG++V V+Q
Sbjct: 349 KKGKFFELYENDATIGHQLFDFKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQM 408
Query: 408 ETPEQLELR-RKEKGSK----DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
E+ E+R R ++ +K DK+++RE+ ++T GTL EG +L + A+Y A+ ES
Sbjct: 409 ESALGKEMRERDDQAAKSKKVDKIIRRELACILTGGTLVEGSMLQDDL-ATYCAAIKES- 466
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ D SR + D + +++ P E++ ++LS +
Sbjct: 467 ---------------ITDGIPSRTMF-------DLTKFETFVAQTSPRELLLEKSLLSSK 504
Query: 523 TERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
R IL++ +P + N P EF DA+ T E++ +
Sbjct: 505 ALR-ILKNNTSPTTIWNYRKPGLEFLDADVTRRELET------------------GGYFD 545
Query: 581 GDGLT--CLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
GDG P +L+E +S+LG + YL+ ++++LL FE +
Sbjct: 546 GDGEREGGWPTVLAE----AKEKDLAMSSLGALVKYLQLLKIEQSLLSQGNFEW-----Y 596
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ + ++LD L NLEVF NS +G + GTL+ LN CVT FGKRL R W+ PL +
Sbjct: 597 NPIRRNGTLILDGQTLINLEVFANSANGSTEGTLFTLLNKCVTPFGKRLFRQWVCHPLCD 656
Query: 699 SGLIRERQDAVAGL---RGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
I ER DAV L R V + F+ + ++++PD+ERL++R+ A V
Sbjct: 657 IDRINERLDAVDMLNSDRSVREQFSAQ----MTKMPDLERLISRIHAG-----------V 701
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL-------- 807
D +F+ L G E ++ S LGA GKGL
Sbjct: 702 CRPD-------DFVKVLEGFEQIEYTMSLLGA-------------WGGGKGLVDRLISSM 741
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + L ++K AFD ++A N +P G++ D+D + ++ EI+ L K L++++ L
Sbjct: 742 PNLDEPLSYWKTAFDRMKAKNDRMFLPERGIEEDFDESQDRIAEIKKDLGKLLEKKKAEL 801
Query: 868 GDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
++ + IGK+++ +E P+S + VP + S+ RY+ + +L+ +L +AE
Sbjct: 802 KCKTLKFTDIGKEIFQIEAPKSTK--VPSSWRQMSATSSVKRYYFDALTELVRDLQEAEE 859
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
+K + R +F + W Q + + L ++ SL A L SC
Sbjct: 860 THGQIMKEVASRFFRRFDTDYTTWLQAIRIISQLDCLV---SLAKASSSLGEPSC 911
>gi|366999412|ref|XP_003684442.1| hypothetical protein TPHA_0B03370 [Tetrapisispora phaffii CBS 4417]
gi|357522738|emb|CCE62008.1| hypothetical protein TPHA_0B03370 [Tetrapisispora phaffii CBS 4417]
Length = 1144
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 206/706 (29%), Positives = 335/706 (47%), Gaps = 87/706 (12%)
Query: 284 FSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
F+ + +++ +L D RDA++R D YDP+TLY+P + +KQ+WE KSK D
Sbjct: 171 FNKQHQERYQWL-IDIRDAEKRPMTDPEYDPKTLYIPTSAWNKFTAFEKQYWEIKSKMWD 229
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNVEKLARKGYR 400
V+FFK GKF+EL+E DA +G DL+ G + + G PE +F + GY+
Sbjct: 230 CVVFFKKGKFFELYEKDAILGNTLFDLKIAGGGRANMNLAGIPEMSFDHWASQFIEYGYK 289
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL-- 458
V V+Q E+ E+R KG +VKRE+ V+T GTLTE +L ++ A+Y +A+
Sbjct: 290 VAKVDQRESMLAKEMREGSKG----IVKRELECVLTSGTLTESNMLHSDL-ATYCLAVRE 344
Query: 459 ---------TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
T++ S S ++ FG+ +D AT I L ++ DD +C+ L L+S++RP
Sbjct: 345 EPGNFYEADTQNIVSVDSTLKNKLFGVSFIDTATGEIQLIELEDDNECTKLETLMSQVRP 404
Query: 510 VEIIKPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
EII + LS + I++ P ++N L EF+D Y T + L
Sbjct: 405 KEIIMEKDNLSNLAHK-IIKFNSAPQAIMNYLKAGEEFYD----------FYK--THDEL 451
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKSFLDETLLR 626
++N +E P IL + + QV SALGG L+YLK LD L+
Sbjct: 452 LSEENNYFKDSSE------WPAILQ---TYYKNKKQVGFSALGGLLYYLKWLKLDGNLIS 502
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ G + ++LD L+NLE+F NS G GTL+ N +T GKR
Sbjct: 503 LGNMKEYDLVG-----SQKSLILDGVTLQNLEIFSNSFDGSDKGTLFKLFNLSITPMGKR 557
Query: 687 LLRTWLARPLYNSGLIRERQDAV------AGLRGVNQPFALEFRKALSRLPDMERLLARL 740
+++ W+ PL I +R D+V LR V F RLPD+ER+LAR+
Sbjct: 558 MMKNWVMHPLLQKSDIEKRLDSVDLLLSDVELRDV-------FESHFIRLPDLERMLARI 610
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+++ ++++F + G E + + +L N + ++
Sbjct: 611 HSTT------------------IKMKDFEKVIQGFETIVKMIDTLKD-RANKGALGIYIS 651
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
P + S + + ++FD A +IIP GV+ ++D + ++K IE L K L
Sbjct: 652 QIP----VDLRSSVDKWSNSFDRACAIEEDKIIPIKGVEPEFDESLNQIKVIEDELNKIL 707
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
E RK +SI Y GK+L+ +EVP + +P + S K RY++ + L
Sbjct: 708 LEYRKRFKCSSIQYKDSGKELFTIEVPMAATKQIPSSWVQMGSNKSTKRYYSDEVSVLAR 767
Query: 921 ELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+++A + + + R+ +F + + W+ V + + IL
Sbjct: 768 SMAEAREKHKIVENDLKNRICKKFDSLYKEVWKPTVTMISNIDCIL 813
>gi|409048502|gb|EKM57980.1| hypothetical protein PHACADRAFT_116507 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1277
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 202/720 (28%), Positives = 335/720 (46%), Gaps = 83/720 (11%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD RP + YDPRTLY+PP + + +KQ+WE K H D V+FF+
Sbjct: 317 DPFGFL-VDVRDKDGVRPSEPGYDPRTLYIPPKAWKAFTPFEKQFWEIKQNHFDTVLFFQ 375
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKF EL+E DA +G +E DL+ + + G PE+NF+ K KGY+V V+Q E
Sbjct: 376 KGKFLELYEEDARIGHQEFDLKLTSRVKMSMVGVPEQNFNFWAAKFLAKGYKVGRVDQAE 435
Query: 409 TPEQLELR---------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
T E+R K DK+V+RE+ V T GTL + LL+ + +
Sbjct: 436 TALGAEMRLAADKGKTKAKAAAGADKIVRRELNKVYTNGTLVDEALLTDDQAGHCVSIRE 495
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E + P ++ + FG+CV+D +TS L DD+ + L ++ +LRP EI+ +
Sbjct: 496 EGEEDP--KTGKQKFGLCVLDSSTSEFNLSAFEDDICRTKLETMVRQLRPKEIVFTKGNI 553
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFWDA---------ETTVLEIKNIYNRITAESLNKA 570
S T R L+ ++P + W + + T+ +K +Y + +
Sbjct: 554 SVPTMR---------LLKAILPSNCLWTSLRDCEGLSFDATIKALKELYPSSLDDDDDLE 604
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ S++ + IL+ + G + ALG ++YL+ + +L F
Sbjct: 605 PRPHSLSKSVPE------AILNMVRYEG-----AVEALGSMIWYLRTLNIGNDILSMKNF 653
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+ + M + +VLD L ++EV NS G G+L L+ C+T GKRL R
Sbjct: 654 NV-----YDPMKRGQGLVLDGQTLAHIEVLVNSE-GTEDGSLLKLLSQCITPSGKRLFRI 707
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGR 749
WL PL + I R DAV L ++ P F EF + L D+ER+++R+ A +
Sbjct: 708 WLCMPLRDIADINARLDAVQDL--IDHPTFEAEFNEVAKGLGDLERIVSRVHAKN----- 760
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA 809
++++F+ L + + + S+L E +SR + +L + P
Sbjct: 761 -------------CKVKDFLKVLDSFKTLSKGLSALADTAEGFKSRTVFGLL---RSAPD 804
Query: 810 IVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
+ +K+ K F+ E S ++P G D +YDS +++ E+E +L LK+ K LG
Sbjct: 805 LAPHIKNVKAMFEITEG--SDELMPREGKDEEYDSVMEEINELERTLETELKKLEKKLG- 861
Query: 870 TSITY---VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
++Y K++YL++ + VPR + S K R+ P + + L +A
Sbjct: 862 IKLSYWHSAQGTKEIYLVQTKPN--EDVPRSWTKSGSTKAAARWTVPELAPTIRSLKEAR 919
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ +A+KS R+ +F + + W + V + L + SL A + L +C E+
Sbjct: 920 ENRNTAIKSFKHRVYAEFDKDRSVWLRAVRVLSELDCLF---SLAKASVALGEPACRPEL 976
>gi|321263883|ref|XP_003196659.1| DNA mismatch repair-related protein [Cryptococcus gattii WM276]
gi|317463136|gb|ADV24872.1| DNA mismatch repair-related protein, putative [Cryptococcus gattii
WM276]
Length = 1210
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 193/696 (27%), Positives = 334/696 (47%), Gaps = 84/696 (12%)
Query: 287 READK-FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKV 345
RE+++ F FL + RD + RP D YD R++ +P + +KQ+WE K H D V
Sbjct: 263 RESEQCFDFL-VNIRDKEGNRPDDPDYDRRSILIPKKSWAEFTPFEKQFWEIKQNHYDTV 321
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVV 404
+FF+ GKFYEL+E DA +G +E DL+ + + G PE++ + K G++V +V
Sbjct: 322 LFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVGVPEQSLEFWIAKFLGAGHKVGIV 381
Query: 405 EQTETPEQLELRRK--EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
+Q ET +E+R K +K ++V+RE+ V T GT+ +G L+++ D ++L+++ ES+
Sbjct: 382 DQAETAIGMEMRTKAGQKTGGREIVRRELARVFTNGTIVDGGYLNSD-DPNHLVSIKESS 440
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
P S+ FGIC+ D +T + DD+ + L + ++RP E+I LS
Sbjct: 441 GGPEGTSS---FGICIADASTGEFSISYFEDDVCRTRLETMFRQIRPKELIHAKGNLSVT 497
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
T R L+ +++P S W + K+ TAE D
Sbjct: 498 TTR---------LLRNILPSSTAWQS------FKDGKEFYTAE----------------D 526
Query: 583 GLTCLPGILS---------ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL 633
L LP I S E I++ + + +LGG LFYLK LD+ L F +
Sbjct: 527 TLNLLPSIFSAEEDESTIPEAITSLQDNALAMESLGGMLFYLKSLNLDKDLFSQRNFNI- 585
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
+ + + ++LD L ++EV N+ G GTL L CV+ GKRL + WL
Sbjct: 586 ----YDPIKEGKNLILDGKTLGHMEVLVNNEGG-IEGTLAELLQRCVSPSGKRLFKIWLR 640
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL ++ I R DAV L +N P F+ +F + LPD+ERL++R+ A S
Sbjct: 641 SPLRDADGINARLDAVEDL--MNHPRFSGDFTQLCKGLPDLERLISRIHAGS-------- 690
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
+ +F+ + + + +L + E+ ES + +L + P +
Sbjct: 691 ----------VKQSDFLQVVESFSKLQKGIDNLVDMSESLESTGVKALL---RSAPDLSG 737
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
+++H + + + + I+P+ G D + D+A +V+ IE L + L+E +K L
Sbjct: 738 MIEHIRGMYTIEQNEKTIAILPNPGADEECDAADAEVERIEEELNEILEEVKKTLKCKEA 797
Query: 873 TY---VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
+ GK+++ +++P S++ P + S K RY+TP ++ ++ +A +
Sbjct: 798 VFWHSAQGGKEIFQIQIPASVKA--PARWTKASGTKSHNRYYTPETIPVIRQIQEAREIQ 855
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+A K+ + L+ +F + W V A L ++
Sbjct: 856 AAAKKNFFKHLMEEFSKDRETWLTTVRVIAELDCLV 891
>gi|326437890|gb|EGD83460.1| hypothetical protein PTSG_04067 [Salpingoeca sp. ATCC 50818]
Length = 1327
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 192/681 (28%), Positives = 314/681 (46%), Gaps = 94/681 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD +R G +DP +LY+PP ++ +KQ+W+ K H + ++FFK GKFYEL+E
Sbjct: 394 RDKNKRTEGHPEFDPTSLYIPPSGWAKMTPFEKQYWDIKQHHWNTILFFKKGKFYELYER 453
Query: 360 DAHVGAKELDLQYMKGEQPHC--GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRR 417
DA +G +E L+ M C G PE F + KGY+V V++ E ++R
Sbjct: 454 DAEIGNREFQLK-MTDRVNMCMAGVPEITFPDWAARFLAKGYKVARVDERENAIAKKMRE 512
Query: 418 KEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
+ G K K+++R++ AV T+GTL G+ + + ++++MA+ E + R +G+
Sbjct: 513 TKTGKKGPKIIERKLSAVYTQGTLM-GDFVIGDM-SNFIMAIKEDEDT-------RTYGV 563
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE-----TERAILRHT 531
C D AT+ + +DD + L+ ++ P E++ P LS +ER L
Sbjct: 564 CFADTATAEFNVCHFVDDAARTAFETLIVQVMPKELVLPKKSLSKVRVRCLSERPCLVGG 623
Query: 532 RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
+ FW ++ T+ ++L K A+ A C P L
Sbjct: 624 EGRGTKGGRRFA-FWSSQMTI------------DNLEKGTRARASVDA------CSPERL 664
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
+S ++ +SALGG + Y K LD++LL F + + +V+D
Sbjct: 665 RAFLSKDEA----MSALGGLVSYFKTLLLDKSLLSQGTF-----FSYDPLHHGATLVIDG 715
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L+NL+V N + G +SG+L L C TAFGKR+ R WL PL I ERQ+AV
Sbjct: 716 QTLQNLDVLCNMQDGTTSGSLLELLCQCHTAFGKRMFRRWLCHPLRRVNDITERQNAVVD 775
Query: 712 LRGVNQPFALEFRKALSR----LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQE 767
L ++ R ALS LPD+ERLL+R+ N + S+ + L
Sbjct: 776 LTE-----HVDLRDALSSMLKPLPDLERLLSRVHV---GNCKLSDLISL----------- 816
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN 827
+ A D+ C +G++ N ++ LK + FD EA
Sbjct: 817 -LDAFDAVSGQDEGC--VGSLFPNLKAE------------------LKAIANIFDRQEAK 855
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG---DTSITYVTIGKDLYLL 884
+ ++ P G +YD A +++ IE L +HL R+ G S + G++ Y +
Sbjct: 856 ATDKLTPKPGALPEYDVAVDQMQSIEKRLNEHLANVRREFGAGKAISFWQPSAGRERYQI 915
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
+V +++ VP ++L SS K RY +P +L+ + +AE LK+ R++
Sbjct: 916 QVRVAMK-KVPSSWKLMSSTKANKRYHSPEAVRLVAKWLEAEETISQFLKTFFSRVLNSI 974
Query: 945 CEHHNKWRQMVAATAGLTLIL 965
EH K+ V+A + L +L
Sbjct: 975 NEHREKFGAAVSALSQLDCLL 995
>gi|348688376|gb|EGZ28190.1| hypothetical protein PHYSODRAFT_353490 [Phytophthora sojae]
Length = 880
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 189/598 (31%), Positives = 294/598 (49%), Gaps = 64/598 (10%)
Query: 413 LELRRKEKGSKDKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQ 468
L++R K KVV+RE+C++++ GT T + + S + + +L+AL E+ +Q
Sbjct: 2 LKVRNSSLAKKAKVVRREVCSLLSIGTNTVSFLDAPISSQDQVSKHLLALKEAFDP--TQ 59
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
T R FG+C+VD +T L + D L L ++ VEI+ +S +T+ +
Sbjct: 60 KTVR-FGVCMVDCSTGAFQLSEFDDTEQRDRLKTLFAQFHIVEIVTERFNISDDTKMTLK 118
Query: 529 RHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCL- 587
+ + L EFW A T+ EI+ +A + E D L L
Sbjct: 119 HSAPAAIRSSLRVGKEFWGASKTIDEIE------------RAGYFKEHGWPE-DVLHFLE 165
Query: 588 --PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL------------ 633
G+ E G +SALGG +++L++S +D+ LL F+
Sbjct: 166 VDKGVKPE-------GQLAISALGGCIWHLRRSIIDQELLSLCNFKRYKPSDEEAREARA 218
Query: 634 ---PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
S + Y+VLD+ ++NLEV NS +G SG+L ++ VT+FG R+ +
Sbjct: 219 NKEALSAAKAELNQQYVVLDSQTIQNLEVLCNSFNGSRSGSLIDIMDKTVTSFGGRMFQE 278
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ +PL G I+ER DAV L G + +E R+ L +LPD+ERLL+R+ A A+
Sbjct: 279 WVLKPLCKIGDIQERLDAVEEL-GNSGDLMMEIREFLRKLPDLERLLSRIHALGSAHRSQ 337
Query: 751 SN---KVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL---- 801
+ + ++YE ++++EF+S L+G + LG L + S L +L
Sbjct: 338 EHPDSRAIMYESQTYNIRKIKEFLSVLNGFDEAMNLTLELGPRLSQSTSPILQSLLKRYQ 397
Query: 802 --------TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
P + L+ FK +FD A SG I+P GVD ++D+AC + +IE
Sbjct: 398 IEDGVQPDIKHGHFPDLTEKLEFFKRSFDQAAAKKSGVIVPQDGVDPEFDAACADIAQIE 457
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGK-DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
A L ++LKEQR L I Y K D Y LEVPES P++YEL+S KKG+ R+ T
Sbjct: 458 AELAEYLKEQRSALRCRDINYWGKKKEDRYQLEVPESALSKQPKEYELKSRKKGYKRFHT 517
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSL 970
P I+ LL L+ AE +KE ALK +R+ +F E + W + V A L ++ G L
Sbjct: 518 PTIRGLLKRLAAAEDQKEEALKDQTRRIFHKFDEDYKYWMKAVQCLAVLDCLVSLGLL 575
>gi|117556981|gb|ABK35676.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1134
Score = 241 bits (615), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 191/706 (27%), Positives = 339/706 (48%), Gaps = 83/706 (11%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D+++ G+ YDP TLY+PP L+ KQ+W+ K+KH DK+I FKMGKFYELF
Sbjct: 197 RKDSRQIPFGNPQYDPTTLYIPPQEFSKLTSAMKQYWQIKAKHFDKIILFKMGKFYELFY 256
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA + + LD+ + E HCGFPE+ KL + GY+V+VVEQT
Sbjct: 257 EDAIIATRLLDITFTNKE-LHCGFPEKALEKFASKLVQFGYKVVVVEQT----------- 304
Query: 419 EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICV 478
K + +V R+I ++TKGT+ N D YL+ + Q T++ FGI V
Sbjct: 305 SKKTTTGIVDRDITQIITKGTIN-FTFEEQNHDPKYLLVI--------RQKTNQEFGIIV 355
Query: 479 VDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANMLSPETERAILRHTRNPLVN 537
+ TS+I +G + DD + L L +P EI+ P N+ S IL+ ++
Sbjct: 356 YESFTSKIQVGLLQDDKTQTRLKSFLCVTKPQEIVYDPGNITSD-----ILKILKSQYFQ 410
Query: 538 DLV-PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIS 596
++ P+ + D +T L I + G + P L ++ +
Sbjct: 411 SVMSPMRDNKDQWSTQLATFYIEKQF------------------GSEVQKYPQELRDIRT 452
Query: 597 TGDSGSQVL----SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
+ QV+ +AL G Y+ + E++L + E + C F + M+LD+
Sbjct: 453 NDEIRGQVINLKYAALAGFFSYMDSTLQLESILNSS--EYVECD-FDNKQFSQRMILDSQ 509
Query: 653 ALENLEVFENSRSGDSS---------GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
AL++LE+FENS++ ++ GTL L++ T +GKR+L+ W+ PL + I
Sbjct: 510 ALQHLEIFENSQTALTTTFQQVDQKKGTLLNYLDYTKTPYGKRMLKKWVCSPLIDISAIN 569
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
+R DA+ ++ N +F+ ++R D+ERL + ++ S +++ K V+YE+ +
Sbjct: 570 DRYDAIEDIQN-NLAMKDKFQYGIARYADIERLCSSIYRYS-VKQKHAEKAVMYENISSA 627
Query: 764 QLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPG-KG-------LPAIVSIL 814
+L+EF + ++ + +++ + EN +S++L + T KG LP + S +
Sbjct: 628 RLKEFKNLINSMKEIEKLIEETFMVNQENFKSQRLKRLCTYRLKGDPKLSGDLPKVSSFI 687
Query: 815 KHFKD--AFDWVEANNSGRI---IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
K +D D E I +P G +YDS ++K + L ++L++ +
Sbjct: 688 KVLEDIIVLDSKEKIAGKYIEQPVPKDGFCQEYDSIRLQIKAYQDELDQYLEQLKVKFKT 747
Query: 870 TSITYVTIGKDLYLLEVPESLRGSV--PRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
I+Y + Y ++V ++L + P D+ L+S F R+ + + + + + E
Sbjct: 748 NDISYAFLNNRQYDIQVNKTLFDKIQKPADFSLQSHSGSFQRFTSRFTSEKVAFIEELEE 807
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHA 973
+ + L + + +F + + W + V+ A L ++ S+ HA
Sbjct: 808 QLKEILSNFCVTVFREFYKKKHVWDKFVSIVAELDCLI---SISHA 850
>gi|401402358|ref|XP_003881229.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
gi|325115641|emb|CBZ51196.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
Length = 1487
Score = 240 bits (612), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 223/760 (29%), Positives = 347/760 (45%), Gaps = 132/760 (17%)
Query: 300 RDAKRRRPGDVY--YDPRTLYLP-PD--FLR-----NLSEGQKQWWEFKSKHMDKVIFFK 349
RD RR D YD +L++P PD R +L+ G Q+WE K H DK+I FK
Sbjct: 429 RDLAGRRAVDCGEDYDFSSLWIPAPDSQLARAHARPHLTPGMAQYWEIKKHHFDKLILFK 488
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKG----EQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+GKFYEL DA + LDL++M G +PHCGFPE+N +L + GY+V+VVE
Sbjct: 489 IGKFYELVYGDACAAHRILDLKWMGGGGADAKPHCGFPEQNLHFQARQLVQAGYKVVVVE 548
Query: 406 QTETPEQLELRRKEKGS--KDKVVKREICAVVTKGTLTEGELLSANPDASYLM------- 456
Q ETP++LE R + G+ KDK V+RE+C V + GT+ ++L +A YL+
Sbjct: 549 QMETPKELEKRNSQAGTGAKDKAVRREVCEVYSAGTVRHADML--GNEARYLLVLYFGDE 606
Query: 457 ---------------ALTESNQSP-------------------------------ASQST 470
A ES+++ AS T
Sbjct: 607 EDEDEDAGGNGGGREARAESSETADGGGAGESMDASSGQDEARGAAEEAEKGRRGASPET 666
Query: 471 DRC----FGICVVDVATSRIILGQVMDDLDCS--VLCCLLSELRPVEII-KPANMLSPET 523
R F C+VDV+T R+ L ++ DD + L LL++ PVE++ P+N+ P +
Sbjct: 667 RRALRPGFAACLVDVSTCRVALVRLSDDPAGAWPSLRLLLAQTLPVEVVYAPSNI--PAS 724
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+L++ P L P+ F D +L + ++R L +A ++ AN+ +
Sbjct: 725 VLKLLKYL--PSAPQLSPMPAFPD----LLASHSEFDRYIGARL-EALASPANASSAPAE 777
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
+ L + S + A+GG YL+ LD ++L +FE
Sbjct: 778 SSSSLESLELCRRLCEKWSSLHCAVGGLCAYLRACRLDGSVLSICRFERF---------- 827
Query: 644 KP----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+P +V+DA AL LE+ + ++ GD+ +L L+ VTAFG RLLR W+ PL N
Sbjct: 828 RPRDASVLVMDANALRQLEILQ-TQDGDAKKSLLGYLDRTVTAFGHRLLRRWVVAPLQNP 886
Query: 700 GLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
++ R DAVA L +N+P ++ RKAL PD+ERL A++ A R K V ++
Sbjct: 887 RELKRRLDAVAWL--LNRPESVASIRKALQACPDIERLSAKICAQGLQGER---KAVYFD 941
Query: 759 DAAKKQLQEFISALHG-----------CELMDQACSSLGAILENTESR-----QLHHILT 802
+K L +F + L C + AC + R +L
Sbjct: 942 QFHQKLLADFFALLDAFLNVEALAQTLCRHLADACGAEEPEENEGTERCERLVELCADRA 1001
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
G G P + ++ K V + G IP GV YD K+++ ++ L + L +
Sbjct: 1002 SGGGFPPLGELVASLKSK---VVTDPDGNRIPAKGVLAAYDDTEKEMQGVQRQLERVLDD 1058
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE--LRSSKKGFFRYWTPNIKKLLG 920
+ ++ +V K Y +E P+++ + R ++ + SS+KGFFR+ TP I L+
Sbjct: 1059 LKSSWKMRNLVFVH-SKFKYEVECPDTVSKELLRTHQCDITSSRKGFFRFRTPEICDLVA 1117
Query: 921 ELSQAESEKESALKSILQRLIGQFCEH--HNKWRQMVAAT 958
EL E +++ A L F H H R + AA
Sbjct: 1118 ELEDLEQKQKDAFYPFFSILFNAFYAHFTHTFGRAIQAAA 1157
>gi|397581604|gb|EJK51986.1| hypothetical protein THAOC_28787, partial [Thalassiosira oceanica]
Length = 1721
Score = 240 bits (612), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 299/1180 (25%), Positives = 474/1180 (40%), Gaps = 261/1180 (22%)
Query: 15 VNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNPNPNPNSNSNRTPSPSPSPTTPSPLQ 74
V Q+ + SFFSK P K++ P+ S + PS T
Sbjct: 236 VGKQKNLFSFFSK-------------QPKKAS---KPSTTSEAGAAPSTGAGQATAGGST 279
Query: 75 SNPKKSRLVIGQTPSPPP-----STPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFD 129
+N +K + ++ A +K + + ++ V+WP D +Y C+
Sbjct: 280 TNDRKPAAAATKAAPSSAKVRKGNSVAKSKYLSQICVGTKLAVFWPDDNEYYP-CLVRKH 338
Query: 130 KECNKHLVQYDDGEDELLDL---------GKEKIEWVQESVSLLKRLRRDSFKKVVVED- 179
K + + ++Y+DGE E +DL GK K + + +++ +K ++ED
Sbjct: 339 KSAHVYEIEYEDGESERVDLSTERFRMIGGKRKDDAGDDRKPSARKVSTAKKRKQILEDT 398
Query: 180 DEEMENVEDEISDDRSDSSDDDWNK-----------NVGKEDVSEDEEVDLVDEQEN--- 225
DEEME +D D S ++ N E ED +D E E
Sbjct: 399 DEEMEFEGSSSEEDSGDESGSEYKAKGDDESMEESLNAEAESEEEDNWMDSDSEDEKPKK 458
Query: 226 ---------KVLR--------------GRKRKSSGVK----------------KSKSDGN 246
KV R GRK+ S+ + K++S
Sbjct: 459 NKKKAIRKVKVTRVSDGKTISPTPLKPGRKKASTATELDFSQFISQSPKEVDGKTQSATR 518
Query: 247 AVNADFKSPIIK--------PVKIFGSDKLSN--------GFDNPVMGDVSERFSAREAD 290
++ KS +K P ++ G + S PV G V+ + +
Sbjct: 519 VGSSAKKSTTLKSDNSVTKKPTQLPGKEAASARSPVAQRAEIPKPVAGMVNPAGTHMH-N 577
Query: 291 KFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNL-----SEGQKQWWEFKSKHMDKV 345
F +RRD +R G + RTL++ L + + QKQWWE KS++ D V
Sbjct: 578 HLKFFTTNRRDLQRNSAGHPNFSTRTLHIDWTELERVNGKAATAAQKQWWEIKSQYADTV 637
Query: 346 IFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+ FK GKFYE+F D+ VG L + YMKG+ H GFPE + V L +GYRV VE
Sbjct: 638 LLFKTGKFYEMFHDDSDVGVAHLGMVYMKGKDGHAGFPEAAYGKYVAMLVERGYRVARVE 697
Query: 406 QTETPEQLELRRKE-KGSKDKVVKREICAVVTKGT-----LTEGELLSANPDASY--LMA 457
QTETP+ L+ R+K KG K VV RE+C VV+KGT L + L+ A+ L+A
Sbjct: 698 QTETPDALKERKKRTKGKKPGVVNREVCGVVSKGTRTFCYLDDTSLIEKGGGATTGPLIA 757
Query: 458 LTE-------SNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+ E S + C +G+ +VD T + LGQ DD+ S + L++ P
Sbjct: 758 IKEVTIDGGDSKGGDEGAANAVCEYGVTIVDAITGVVTLGQFADDVLRSRIQTLVASFNP 817
Query: 510 VEI---------------------IKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
E+ + P + + E R+ T + + P +
Sbjct: 818 SEVCTHGVPVLLLRFCGRARTLIQLIPRSQVLYEGGRSGASKTLISFLKSICPPHTVIEC 877
Query: 549 --------ETTVLEIKN--IYNRITAESLNKADSNVA-------------NSQAEGD-GL 584
++ L+ KN I R + S++ D+N A + +AEG+ G+
Sbjct: 878 INSTECFPKSNALDPKNKKILERGSG-SVSPWDANDAVKELHRRAYYPRSSRKAEGEPGI 936
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA--KFELLPCSG----- 637
+ P IL + G + LS+ G LFYL++S +D +L K P SG
Sbjct: 937 SRWPEILRRCVEGG--AALALSSFGAALFYLQRSLVDFEILSMGIVKAYCPPSSGAVDES 994
Query: 638 ------------FGDMAKK-------------------------------PYMVLDAPAL 654
+ + A+K +M LD L
Sbjct: 995 SAENASKQIEKMYTEEARKDEGTDLVDQTDEVDVDFGTSSSSAATAEDQIDHMALDGTTL 1054
Query: 655 ENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG 714
NLE+ + +G G+L ++++ + G RLLR WL RPL+ I R D V L
Sbjct: 1055 TNLEILHSLSTGSKDGSLLSKIDFTRSPHGARLLRAWLLRPLFRKEDIDRRADVVQELSS 1114
Query: 715 VNQPFAL-EFRKALSRLPDMERLLARLFA-----SSEANGRN-----SNKVVLYEDA--A 761
A+ E R+ L + D+ERLL+R+ + SS+ + N + VLYE
Sbjct: 1115 GAAAVAMCEARELLRKTNDIERLLSRVHSMGGSISSDGSANNISYLPEERAVLYESEKHT 1174
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENT--ESRQLHHILTP---GKGLPA-IVSILK 815
K+++ +F L+G +A S + ++ NT ES L I+ G PA + L
Sbjct: 1175 KRKVGDFSKLLNGL----KAASEIPSLFANTEVESPMLAKIVKTTEDGGCFPAQMREKLD 1230
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK-------LLG 868
+F D FD V+ G P G+D YD +++ I+ L + E L
Sbjct: 1231 YFFDNFD-VKKAAKGDFEPSRGMDEVYDRVLEEIDSIKHQLEQFRDEMCSNGELDPPRLA 1289
Query: 869 DTSITYVTI---GKDLYLLEVPESLRGSVPRDYELRSSK----KGFFRYWTPNIKKLLGE 921
Y+ + KD YL+E+P S+ +VP ++ ++ + K +Y P + L+ +
Sbjct: 1290 RQHWKYINLKEDSKDKYLIELPISV--NVPAEFVVKGKRGKGDKQVNKYRAPRVASLVQQ 1347
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
L A K S ++ + +F N W ATA L
Sbjct: 1348 LEDALDVKTSRKTEGMRLIFAKFDSMRNHWMASCHATAML 1387
>gi|224119772|ref|XP_002331157.1| predicted protein [Populus trichocarpa]
gi|222873240|gb|EEF10371.1| predicted protein [Populus trichocarpa]
Length = 1107
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 169/468 (36%), Positives = 253/468 (54%), Gaps = 52/468 (11%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF +L P + RDA RRRP D YD +TLYLPPD L+ +S QKQ+W KS++MD ++FFK
Sbjct: 228 KFEWLDPAQIRDANRRRPNDPLYDKKTLYLPPDALKKMSASQKQYWTVKSQYMDVLLFFK 287
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E+DA +G KELD + C G E VEKL +GY+V VEQ
Sbjct: 288 VGKFYELYELDAEIGHKELDWKMTLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRVEQ 347
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
ET +Q K +G+ + V++R++ VVT T T + PDA +L+A+ E N
Sbjct: 348 LETSDQ----AKSRGA-NSVIQRKLVQVVTPSTTTGHNM---GPDAVHLLAIKEGNYGVD 399
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ +T +G VD A R+ +G + DD + L LL ++ P E+I LS ++
Sbjct: 400 NGAT--AYGFAFVDCAALRVWVGSINDDASHAALGALLMQISPKEVIYENRELSRGAQKE 457
Query: 527 ILRH----TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ ++ + ++ ++P ++F DA E+KN+ I ++ K +N N
Sbjct: 458 LRKYSLIGSTALQLSPVLPGTDFVDAS----EVKNL---IQSKDYFKWSTNPWNH----- 505
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
L I+ + IS L ALGG + +L + D+ +LR A ++LP +
Sbjct: 506 ---ALDSIMHQDIS--------LCALGGLIGHLSRLMFDD-VLRNA--DILPYQVY---- 547
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSG--TLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
K + +D L NLEVF NS G SSG TL+ L++CVT+ GKRLLR W+ PL +
Sbjct: 548 -KGCLRMDGQTLVNLEVFSNSADGGSSGQCTLFNYLDNCVTSSGKRLLRNWICHPLKHVE 606
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
I R D + L ++ L + L +LPD+ER+L R+ S +A+G
Sbjct: 607 GINNRLDVIENLMARSE-IMLVIAQYLRKLPDLERMLGRVKVSFQASG 653
>gi|115434900|ref|NP_001042208.1| Os01g0180600 [Oryza sativa Japonica Group]
gi|55296256|dbj|BAD68036.1| putative DNA mismatch repair protein [Oryza sativa Japonica Group]
gi|55296304|dbj|BAD68084.1| putative DNA mismatch repair protein [Oryza sativa Japonica Group]
gi|113531739|dbj|BAF04122.1| Os01g0180600 [Oryza sativa Japonica Group]
Length = 1224
Score = 238 bits (608), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 190/601 (31%), Positives = 291/601 (48%), Gaps = 77/601 (12%)
Query: 238 VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGP 297
+K+ + D D SP P K K+ +PV V + + KF +L P
Sbjct: 318 LKRVQEDQRVTTNDSCSPFWGPNK-----KVKPAQCSPVENKVHDEMAESARSKFEWLNP 372
Query: 298 DR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYEL 356
RDA RRR D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL
Sbjct: 373 SNIRDANRRRLADPLYDKTTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYEL 432
Query: 357 FEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
+E+DA +G KELD + C G E + VEKL +GY+V +EQ E+ +Q
Sbjct: 433 YEVDAEIGQKELDWKMTISGVGKCRQVGISESGIDVAVEKLLARGYKVGRIEQMESADQ- 491
Query: 414 ELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRC 473
K +GS + V+ R++ V T T+ + + DA +L++L E + + R
Sbjct: 492 ---AKSRGS-NSVILRKLVHVSTPSTVGDSNI---GADAVHLLSLKEIT---LASNGSRV 541
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G +D A +I +G V DD + L LL ++ P EII + LS ET R I ++
Sbjct: 542 YGFAFLDYAALKIWVGSVHDDDTFAALGALLVQVSPKEIIYETSGLSKETHRLIKKYASA 601
Query: 534 PLVN-DLVPLSEFWDAET----TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
V L PL + ++ T+++ + + T+ L+ +S+V N A
Sbjct: 602 GSVKMQLTPLYGLYFSDVSEIQTLIDSRGYFKASTSSWLSALNSSV-NKDA--------- 651
Query: 589 GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV 648
V+ ALGG + +L + L++ L E+L + + +
Sbjct: 652 ---------------VICALGGLVSHLTRLMLEDAL---KNGEVLAYHVY-----RTCLR 688
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
+D L NLE+F N+ G SSGTLY LNHC+T GKRLLR W+ PL + I ER D
Sbjct: 689 MDGQTLVNLEIFSNNFDGGSSGTLYKHLNHCITPCGKRLLRRWICHPLKDIDAINERLDI 748
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY--EDAAKKQLQ 766
V G N + L ++PD+ERLL R+ ++ G +S ++ + E K++++
Sbjct: 749 VEGFIQ-NCGLGSVTLEHLRKVPDLERLLGRVKSTV---GLSSAVLLPFVGEKILKRRIK 804
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHI--LTPGKGLPAIVS---ILKHFKDAF 821
F + G +G L + RQ H I L+ +P + S ++ HF++A
Sbjct: 805 TFGMLVKGLR--------VGIDLLDILQRQDHGISALSKAVDIPTLSSLGELIHHFEEAI 856
Query: 822 D 822
D
Sbjct: 857 D 857
>gi|67611475|ref|XP_667158.1| DNA repair protein [Cryptosporidium hominis TU502]
gi|54658270|gb|EAL36933.1| DNA repair protein [Cryptosporidium hominis]
Length = 1242
Score = 238 bits (607), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 207/701 (29%), Positives = 322/701 (45%), Gaps = 119/701 (16%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSE-------GQKQWWEFKSKHMDKVIFFKMGK 352
RD+K RP D YDP T+++P R E +Q+WE K +H DK++FFKMGK
Sbjct: 283 RDSKGTRPLDPCYDPSTIWVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKMGK 342
Query: 353 FYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYELF +DA++ K DL++ + +PH GFPE KL GYRV+VVEQ ETP+
Sbjct: 343 FYELFYIDAYICQKHCDLRWTSSDSKPHVGFPETALHAYANKLVELGYRVVVVEQMETPK 402
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQ 468
+LE R + KDK +KR + V T GTL ++LS AS LM L S +
Sbjct: 403 ELEERNRSASRGVKKDKAIKRSVNEVFTNGTLVRPDMLSDM--ASILMTLYFSKKDSEDL 460
Query: 469 STDRCFGICVVDVATSRIILGQVMDD----LDCSVLCCLLSELRPVEIIK-PANMLSPET 523
+ + G+ VD+ T + L + + L + C +++P EI P NM
Sbjct: 461 AYE--IGVVCVDITTGKAELINIEEKGDQFLQVRTIVC---QVQPKEIAYLPGNM----- 510
Query: 524 ERAILRHTRNPLVNDLVP---LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA- 579
+ILR+ ++ +VP L+ F D +VL I +I T E LN V N
Sbjct: 511 PLSILRY-----LSSIVPSIQLTNFRDFVDSVLAINDILE--TFEKLNVPVPEVVNHLCN 563
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
E L C AL GT YL L + L+ F
Sbjct: 564 ESKSLCC--------------------ALSGTFRYLTTILLCDRLIMTGTFTEY------ 597
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D + +++++ A+++LE+ + S+ GD +L+ L H +T G RLL+ W+ PL N+
Sbjct: 598 DPSVSRHLIVNVGAIKDLELLQ-SQHGDEKNSLFGFLKHTITPGGTRLLKRWITYPLVNT 656
Query: 700 GLIRERQDAVAGLRGVNQPFALEFR------------------KALSRLPDMERLLARLF 741
I ER D+V L N EFR K S+ D ERL+ R+
Sbjct: 657 DRINERLDSVKWLMD-NSEKLYEFRDELRAIERSASSASRGSRKKYSQHLDFERLINRIT 715
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALH------GCEL-----------MDQACSS 784
+ N R + V + + +++ EF+++++ C + M + ++
Sbjct: 716 SGVLQNKRGA---VYFSNVVQRRFDEFVNSMNLFDSVLQCIIRVFGDENLRKDMPKLLAA 772
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
L I + + L +I + L ++V++ + K DW IP G +YD
Sbjct: 773 LTGIKDESSEGFLENIFATTERLRSLVTLDSNGK---DW---------IPVPGNCKEYDD 820
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSS 903
+ + E + + LK K + T+I++V K Y +E PES+ + P E+ SS
Sbjct: 821 LLESINETKLCFDEELKRISKQMNTTAISFVN-NKYRYEVECPESIPKSRFPDSAEITSS 879
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
KKG+ R+ T IK+L+ +L E + E +L L + +F
Sbjct: 880 KKGYVRFHTEEIKQLVYDLEYKEEQLEKSLFPYLHLMCKEF 920
>gi|392589317|gb|EIW78648.1| DNA mismatch repair protein Msh6 [Coniophora puteana RWD-64-598
SS2]
Length = 1270
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 201/704 (28%), Positives = 325/704 (46%), Gaps = 84/704 (11%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D RD +PG+ YDPRTLY+P + + +KQ+WE K H D V+FF+ G
Sbjct: 310 FSFL-VDVRDKDGIKPGEPGYDPRTLYVPKSAWKQFTPFEKQFWEIKQNHFDTVLFFQKG 368
Query: 352 KFYE-------LFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
KF E L+E DA +G +E DL+ + + G PE +F+ K KGY+V
Sbjct: 369 KFLEARSYQESLYEDDARIGHREFDLKLTHRVKMSMVGVPEMSFNFWAAKFLGKGYKVGR 428
Query: 404 VEQTETPEQLELR----RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
V+Q ET E+R + E G KDK+V+R + V T GTL + +LL+ + A + ++L
Sbjct: 429 VDQAETALGAEMRLAKSKGEDGGKDKIVRRSLNKVFTNGTLVDDDLLT-DEQAGHCISLR 487
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML 519
E P S S FG CV+D ATS+ L DD+ + L L+ +LRP E++ L
Sbjct: 488 E--LPPVSTSAKPSFGACVLDSATSQFNLSFFEDDVCLTRLETLVRQLRPKEVVFTKGNL 545
Query: 520 SPETERAILRHTRNPLVNDLVPLSEFW---------DAETTVLEIKNIYNRITAESLNKA 570
S T R L+ ++P + W D + T+ E+ ++ S N+
Sbjct: 546 SVATTR---------LLKAILPAACLWTSLRDVEGYDYDQTLTELNTMFG--PGSSANED 594
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF-----YLKKSFLDETLL 625
++ A+ DG + L + + I S + ALG + YLK+ +D LL
Sbjct: 595 ETMDAD-----DGDSALSSAIPQEIRDMASCRSAIEALGAMAWYVDAPYLKQLNIDRDLL 649
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F + + M + +VLD L ++EV N+ G+ G+L+ LN C+T FGK
Sbjct: 650 TMRNFNV-----YDPMKRGQNLVLDGQTLAHVEVLMNTE-GNDDGSLHKMLNRCITPFGK 703
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASS 744
RL R WL PL + I R DAV+ L + P F F + + +PD+ER+++R+ A +
Sbjct: 704 RLFRIWLCVPLRDVKDINSRLDAVSDL--MEHPTFEQAFSELVKGMPDLERIVSRIHAKN 761
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
++++FI L + + + + L E ES+ + +L
Sbjct: 762 ------------------CKVKDFIKVLTSFKKLSKGFAKLADTSEEFESKTILGLLRSA 803
Query: 805 KGL-PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA-CKKVKEIEASLTKHLKE 862
L P I ++ + ++ ++P G D YD C+ + + + K
Sbjct: 804 PDLEPHIDNVESRY------TVDKDADMLLPVEGKDDVYDEVMCEIGELEKELEGELKKF 857
Query: 863 QRKLLGDTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
Q+KL + + IG K++YL++ VP ++ K RY P+++ +
Sbjct: 858 QKKLGIPLTWWHSAIGNKEIYLVQTKPG--DDVPDNWVKNGGTKNAVRYVVPSLQATIRR 915
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L +A + +A+K RL +F W + V A L +
Sbjct: 916 LKEARENRGTAVKEFKNRLFAEFDADRGVWLRAVRVLAELDCLF 959
>gi|84784043|gb|ABC61986.1| MSH6-like protein [Trichomonas vaginalis]
Length = 1070
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 200/689 (29%), Positives = 316/689 (45%), Gaps = 95/689 (13%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
S E D +L RD ++RP + YDP T+Y+P + QKQ+W+ K + D
Sbjct: 160 SVSEEDLPDWLTTKLRDKNKKRPDEEGYDPSTVYIPETVKETFTPFQKQFWDIKENNFDA 219
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++ + GKFYE+F +DA L L +G++P CG PE+ FS K+ G RV
Sbjct: 220 IVMIRKGKFYEMFSVDAIFARDVLKLHLTYRGKEPMCGVPEKAFSEWAIKIINAGKRVCK 279
Query: 404 VEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESN 462
VEQ ET + RK KG+ +K ++R++ V + GT+ + E+L S+ P SYL+++ S+
Sbjct: 280 VEQMETAID-QANRKGKGA-EKAIQRKLVQVYSLGTIDDFEMLESSQP--SYLLSIRSSS 335
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ A G+C+VD +T LG V +D L L PVE+I AN +SPE
Sbjct: 336 RQTA--------GVCLVDCSTGTFHLGAVNED----DLADTLIRFEPVEVIYSANNISPE 383
Query: 523 TERAILRHTRNPLVNDLVPLSEFWD---AETTVLEIKNIYNRITAESLNKADSNVANSQA 579
AI++H + SE WD A T+L+I N
Sbjct: 384 -HLAIIKHYCGNVATRAKTGSETWDSTLAMNTILKIAKWDN------------------- 423
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
+P L + ++ALGG + YL + + E+LL +F+ L +G
Sbjct: 424 -------VPDSLENV------HQDAIAALGGCVAYLNEHKIAESLLSLKRFKTLDEAGSS 470
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D+ AL NL++ G L L+HC T FG+R LR W+ PL +
Sbjct: 471 SFLSL-----DSSALTNLQII-----GKDPHCLINILDHCTTPFGRRRLRFWIMHPLRSI 520
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I ERQ AV L +P K L +PD+ER+L+R++++ + S KV +
Sbjct: 521 NQIEERQKAVEELM---KPDFNTLSKELKTIPDLERMLSRVYSN-----KCSVKVFIDCL 572
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
A K+ +F + + G +S L +++ PGKG S+ K D
Sbjct: 573 GALKKCCQFFTKIEG----------------TVKSPLLANVVPPGKG----KSLAKQIDD 612
Query: 820 AFDWVEAN---NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+E S I GV D D ++V IE L L++ ++ +G ++YV
Sbjct: 613 ILAELEVEKSIQSNEFIVKKGVFKDIDDIDEEVSSIEDDLNDILRDIKREVGCKDLSYVN 672
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
+ + + +++P +P Y L S K RY TP IK+ L +L E+E++
Sbjct: 673 MQSEKFQVQIPVKYCSDLPDKYILMSQTKSVRRYHTPEIKEKLKQLDIVENERQKLRSGS 732
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+R I +F ++ W +V A A + ++
Sbjct: 733 QKRFIDEFAKNSPIWDSIVDAIADIDCLI 761
>gi|123479127|ref|XP_001322723.1| MutS domain III family protein [Trichomonas vaginalis G3]
gi|121905574|gb|EAY10500.1| MutS domain III family protein [Trichomonas vaginalis G3]
Length = 1057
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 201/689 (29%), Positives = 312/689 (45%), Gaps = 95/689 (13%)
Query: 285 SAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
S E D +L RD ++RP YDP T+Y+P + QKQ+W+ K + D
Sbjct: 147 SVSEEDLPDWLTTKLRDKNKKRPDKEGYDPSTVYIPETVKETFTPFQKQFWDIKENNFDA 206
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLV 403
++ + GKFYE+F +DA L L +G++P CG PE+ FS K+ G RV
Sbjct: 207 IVMIRKGKFYEMFSVDAIFARDVLKLHLTYRGKEPMCGVPEKAFSEWAIKIINAGKRVCK 266
Query: 404 VEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESN 462
VEQ ET + RK KG+ +K ++R++ V + GT+ + E+L S+ P SYL+++ S+
Sbjct: 267 VEQMETAID-QANRKGKGA-EKAIQRKLVQVYSLGTIDDFEMLESSQP--SYLLSIRSSS 322
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ A G+C+VD +T LG V +D L L PVE+I AN +SPE
Sbjct: 323 RQTA--------GVCLVDCSTGTFHLGAVNED----DLADTLIRFEPVEVIYSANNISPE 370
Query: 523 TERAILRHTRNPLVNDLVPLSEFWD---AETTVLEIKNIYNRITAESLNKADSNVANSQA 579
AI++H + SE WD A T+L+I N
Sbjct: 371 -HLAIIKHYCGNVATRAKTGSETWDSTLAMNTILKIAKWDN------------------- 410
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
+P L + ++ALGG + YL + + E+LL +F+ L +G
Sbjct: 411 -------VPDSLENV------HQDAIAALGGCVAYLNEHKIAESLLSLKRFKTLDEAGSS 457
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D+ AL NL++ G L L+HC T FG+R LR W+ PL +
Sbjct: 458 SFLSL-----DSSALTNLQII-----GKDPHCLINILDHCTTPFGRRRLRFWIMHPLRSI 507
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I ERQ AV L +P K L +PD+ER+L+R+++ N V ++ D
Sbjct: 508 NQIEERQKAVEELM---KPDFNTLSKELKTIPDLERMLSRVYS-------NKCSVKVFID 557
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
+ AL C C I +S L +++ PGKG S+ K D
Sbjct: 558 C--------LGALKKC------CQFFTKIEGTVKSPLLANVVPPGKG----KSLAKQIDD 599
Query: 820 AFDWVEAN---NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
+E S I GV D D ++V IE L L++ ++ +G ++YV
Sbjct: 600 ILAELEVEKSIQSNEFIVKKGVFKDIDDIDEEVSSIEDDLNDILRDIKREVGCKDLSYVN 659
Query: 877 IGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
+ + + +++P +P Y L S K RY TP IK+ L +L E+E++
Sbjct: 660 MQSEKFQVQIPVKYCSDLPDKYILMSQTKSVRRYHTPEIKEKLKQLDIVENERQKLRSGS 719
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+R I +F ++ W +V A A + ++
Sbjct: 720 QKRFIDEFAKNSPIWDSIVDAIADIDCLI 748
>gi|20152859|gb|AAM13399.1| MutS homolog 7 [Triticum aestivum]
Length = 1160
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 250/492 (50%), Gaps = 61/492 (12%)
Query: 262 IFGSDK-LSNGFDNPVMGDVSERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYL 319
++GS+K + + +P V + + KF +L P + RDA +RRP D YD RTL++
Sbjct: 272 LWGSNKKVKSAHCSPPGKMVHDEMAESARSKFEWLNPLNIRDANKRRPDDPLYDKRTLFI 331
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH 379
PPD LR +S QKQ+W K K+MD ++FFK+GKFYEL+E+DA +G KELD +
Sbjct: 332 PPDALRKMSTSQKQYWSIKCKYMDVLLFFKVGKFYELYEVDAEIGQKELDWKMTISGVGK 391
Query: 380 C---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
C G E VEKL +GY+V +EQ E+ Q + R + V++R++ V T
Sbjct: 392 CRQVGISESGIDDAVEKLLARGYKVGRIEQMESAAQAKSR-----GPNSVIERKLAHVST 446
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
T + + PDA +L+AL E + + R +G +D A +I +G + DD
Sbjct: 447 PSTAADSNI---GPDAVHLLALKEVT---LASNGSRLYGFAFLDYAALKIWVGSLQDDDS 500
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN-DLVPL--SEFWDAETTVL 553
+ L LL ++ P EII ++ LS E+ ++++++ V L PL ++F DA +
Sbjct: 501 SAALGALLVQVSPREIIYESSGLSRESRKSMIKYASAGSVKMQLTPLPGTDFSDASQIQM 560
Query: 554 EI--KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ K + T L+ D +V N A V+ ALGG
Sbjct: 561 LVHSKGYFKASTDSWLSALDYSV-NRDA------------------------VIFALGGL 595
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +L + LD+ L E+LP + + + + +D L NLE+F N+ G SSGT
Sbjct: 596 IGHLTRLMLDDAL---KNGEVLPYNVY-----QTCLRMDGQTLVNLEIFGNNFDGGSSGT 647
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR---GVNQPFALEFRKALS 728
LY LNHC+TA GKRLLR W+ PL + I R D V G GV RK
Sbjct: 648 LYKHLNHCITASGKRLLRRWICHPLKDVDAINRRLDVVEGFIQHCGVGSITLYYLRK--- 704
Query: 729 RLPDMERLLARL 740
+PD+ERLL R+
Sbjct: 705 -IPDLERLLGRI 715
>gi|393243806|gb|EJD51320.1| DNA mismatch repair protein Msh6 [Auricularia delicata TFB-10046
SS5]
Length = 1110
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 203/692 (29%), Positives = 320/692 (46%), Gaps = 88/692 (12%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D RD R P D YDPRT+Y+P ++ + ++Q+WE K D V+FF+ G
Sbjct: 184 FSFL-KDVRDKDGRAPSDPDYDPRTIYIPKSAWKSFTPFERQFWEIKQNQYDTVLFFQKG 242
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KF+EL+E DA +G +E DL+ + + G PE++F K +G++V V Q ET
Sbjct: 243 KFFELYENDARIGHQEFDLKLTERVKMCMVGVPEQSFDFWAVKFLMRGHKVGKVMQDETA 302
Query: 411 EQLELR-RKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
E+R K G+K DK+V+R + V T GTL + + +A + +++ ES
Sbjct: 303 LGAEMRLAKTAGAKSKEDKIVRRVLNQVFTLGTLVD----PLDEEAGHCVSVVESG---- 354
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
D FG+CV+D +TS + DD + L +L R E++ L+ ET R
Sbjct: 355 ----DGRFGVCVLDCSTSEFNMASFEDDPCRTKLETVLRRTRVKEMLGIKGNLTSETTR- 409
Query: 527 ILRHTRNPLVNDLVPLSEFW---------DAETTVLEIKNIYNRITAESLNKADSNVANS 577
L+ ++P + W E T+ +K +Y +
Sbjct: 410 --------LLKTVLPGNCLWTWQRSADVLSYEQTLQALKELYPQ-------------PED 448
Query: 578 QAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
E D +P + I T + ALG T+ YL++ LD+ +L F +L
Sbjct: 449 AMEEDEYAGVP----QSIRTMLHERAPIEALGATIAYLRQLNLDKNILSMRNFNVL---- 500
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
M K ++LD L +LEV NS G + G+L L CVT FGKRL R WL PL
Sbjct: 501 -DPMRKGVGLLLDGQTLAHLEVLSNS-DGTAEGSLLDLLGRCVTPFGKRLFRMWLCAPLR 558
Query: 698 NSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I +R DAV L ++ P + E F K +PD+ERLL R+ A G+ K L
Sbjct: 559 EAATINDRLDAVEDL--MDHPSSAEQFAKLAKGVPDLERLLTRIHA-----GKCKVKDFL 611
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
K L F+ G L D+ A LEN + +L K +P + +
Sbjct: 612 ------KVLLTFLQTFKG--LNDKL-----ADLENAAKLKAPSLLRLFKSVPDLTPHVTA 658
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY-- 874
++ + A + ++P G D YD +++++IE +L + L + ++G T +TY
Sbjct: 659 IEEMY----ALDDDSLLPASGKDETYDQVIEEIEDIEGNLERKLDKFADVVG-TKLTYWH 713
Query: 875 -VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
K++Y+++VP + VP D+ +S K RY P++ L+ +L +A + +A+
Sbjct: 714 SAQGQKEIYIVQVPAAKTKKVPSDWVQTNSTKAMKRYDVPDLAPLIRKLKEARENRTAAI 773
Query: 934 KSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
S R+ F W + V A L +
Sbjct: 774 NSFKSRVFAAFDADRGIWLRAVRMLAELDCLF 805
>gi|134116991|ref|XP_772722.1| hypothetical protein CNBK0960 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255340|gb|EAL18075.1| hypothetical protein CNBK0960 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1205
Score = 236 bits (602), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 254/951 (26%), Positives = 432/951 (45%), Gaps = 126/951 (13%)
Query: 61 PSPSPSPTTP--SPLQSNPKKSRLVIGQTPSP--PPSTPAAAKSYGEDVLRKRIRVYWPL 116
P P P P+ P S L+S+P + +TPS S+P AKS I+ PL
Sbjct: 16 PKPGPRPSQPRSSQLKSSPASTL----RTPSTSVAGSSPVQAKS-SRPAPGSSIKRSSPL 70
Query: 117 DKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIE---WVQESVSLLKRLR----- 168
+ E + + +D +DEL K + V ES S K+
Sbjct: 71 KQP-----------EPSSEITAIEDEDDELTPPPKSDVSDATTVGESSSGKKQDEDEEMD 119
Query: 169 ---------RDSFKKVVVEDDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDL 219
R + +KVV D + ++ E E+ + +S+ + KED SEDE +
Sbjct: 120 DDEPPIVTGRRAKRKVVYVDPDSDDDSEGEV---KPKASNGRRPRKSLKED-SEDEYMFD 175
Query: 220 VDEQ----------ENKVLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLS 269
+ E L K S K +K+ +A K P P++ +
Sbjct: 176 EADDAAMAAALDDFEANKLSPSKSPSPPRKITKAKATP-SASSKKPTTTPIRPGPKPIAN 234
Query: 270 NGFDNPVMGDVSER--FSAREADK-----FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPD 322
G ++ +ER A+E + F FL + RD + RP D YD R++ +P
Sbjct: 235 KGSESSSFLTAAERKKIQAKEDKRESEQCFDFL-VNIRDKEGNRPDDPDYDKRSILIPKK 293
Query: 323 FLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCG 381
+ +KQ+WE K H D V+FF+ GKFYEL+E DA +G +E DL+ + + G
Sbjct: 294 SWAEFTPFEKQFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEFDLKLTDRVKMKMVG 353
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK--EKGSKDKVVKREICAVVTKGT 439
PE++ + K G++V +V+Q ET +E+R K +K ++V+RE+ V T GT
Sbjct: 354 VPEQSLEFWIAKFLGAGHKVGIVDQAETAIGMEMRTKAGQKTGGREIVRRELARVFTNGT 413
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ + L+++ D ++L+++ ES+ SP S+ FGIC+ D +T + DD+ +
Sbjct: 414 IVDSGYLNSD-DPNHLVSIKESSGSPEGISS---FGICIADASTGEFSISFFEDDVCRTR 469
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L + ++RP E+I LS T R L+ +++P S W + + K Y
Sbjct: 470 LETMFRQIRPKELIHAKGNLSVTTTR---------LLRNILPSSTAWQ---SFRDGKEFY 517
Query: 560 NRITAE-SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
TAE +L+ S +N Q G +P E I++ + + +LGG LFYLK
Sbjct: 518 ---TAEDTLSLLPSIFSNEQ----GQITIP----EAITSLQDNALAMESLGGMLFYLKSL 566
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
LD+ L F + + + + ++LD L ++EV N+ G GTL L
Sbjct: 567 NLDKDLFSQRNFNI-----YDPIKEGKNLILDGKTLGHMEVLVNNEGG-IEGTLAELLQR 620
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLL 737
CV+ GKRL + WL PL ++ I R DAV L +N P F+ +F + LPD+ERL+
Sbjct: 621 CVSPSGKRLFKVWLRSPLRDADAINARLDAVEDL--MNHPRFSGDFTQLCKGLPDLERLI 678
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
+R+ A S + +F+ + + + +L + E+ ES +
Sbjct: 679 SRIHAGS------------------VKQSDFLQVVESFSKLQKGIDNLIDMSESLESTGV 720
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
+L + P + +++H + + + + I+P+ G D + D+A +V+ IE L
Sbjct: 721 KALL---RSAPDLSGMIQHIRGMYTIEQNEKTIAILPNPGADEECDAADAEVERIEEELN 777
Query: 858 KHLKEQRKLLGDTSITY---VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+ L+E +K L + GK+++ ++VP S++ P + S K RY+TP
Sbjct: 778 EILEEVKKTLKCKEAVFWHSAQGGKEIFQIQVPASVKA--PARWTKASGTKSHNRYYTPE 835
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++ ++ +A + +A K+ + L+ +F + W V A L ++
Sbjct: 836 TIPVIRQIQEARETQAAAKKNFFKHLMDEFSKDRETWLITVRVIAELDCLV 886
>gi|255546545|ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
gi|223546788|gb|EEF48286.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
Length = 1089
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 159/466 (34%), Positives = 239/466 (51%), Gaps = 50/466 (10%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF +L P R RD RRP D YD +TLY+PPD LR +S QKQ+W KS++MD V+FFK
Sbjct: 216 KFEWLDPLRIRDINGRRPSDPLYDKKTLYIPPDALRIMSASQKQYWSVKSQYMDVVLFFK 275
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E+DA +G KELD + C G E VEKL +GY+V +EQ
Sbjct: 276 VGKFYELYELDAEIGHKELDWKITLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRIEQ 335
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
ET Q + R + V++R++ V+T T T+G + PDA +L+AL E N
Sbjct: 336 LETSVQAKAR-----GANSVIQRKLVQVITPSTATDGNI---GPDAVHLLALKEGNYGLD 387
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ T +G VD A+ R +G + DD C+ L LL ++ P E+I +S E ++A
Sbjct: 388 NGET--AYGFAFVDCASLRFWVGSINDDTSCAALGALLMQVSPKEVIYETKGISREAQKA 445
Query: 527 ILRHTRNP----LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ +++ +N P + F DA + N I ++ + S+ N+
Sbjct: 446 LRKYSITGSTAVQLNPAPPSTNFLDAS-------EVRNSIQSKGYFRGSSSPWNN----- 493
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
I+ I+ L+ALG + +L + LD+ L ++LP +
Sbjct: 494 ---VFDSIMHHDIT--------LNALGTLVDHLSRLMLDDVL---RNGDILPYQVYSGCL 539
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
+ +D L NLE+F N+ G SGTL+ L++CVT+ GKRLLR W+ PL + I
Sbjct: 540 R-----MDGQTLINLEIFNNNSDGGLSGTLFNYLDNCVTSSGKRLLRKWMCHPLKSVEGI 594
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
R + V L L + L ++PD+ER+L R+ AS +A+
Sbjct: 595 NNRLNVVEDLM-TQSDIMLVISQYLRKIPDIERMLGRVKASFQASA 639
>gi|126654495|ref|XP_001388418.1| DNA repair protein [Cryptosporidium parvum Iowa II]
gi|126117123|gb|EAZ51223.1| DNA repair protein [Cryptosporidium parvum Iowa II]
Length = 1242
Score = 236 bits (601), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 205/701 (29%), Positives = 323/701 (46%), Gaps = 119/701 (16%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSE-------GQKQWWEFKSKHMDKVIFFKMGK 352
RD+K RP D YDP T+++P R E +Q+WE K +H DK++FFKMGK
Sbjct: 283 RDSKGTRPLDPCYDPSTIWVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKMGK 342
Query: 353 FYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYELF +DA++ K DL++ + +PH GFPE KL GYRV+VVEQ ETP+
Sbjct: 343 FYELFYIDAYICQKHCDLRWTSSDSKPHVGFPETALHAYANKLVELGYRVVVVEQMETPK 402
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQ 468
+LE R + KDK +KR + V T GTL ++LS AS LM L S +
Sbjct: 403 ELEERNRSASRGVKKDKAIKRSVNEVFTNGTLVRPDMLSDM--ASILMTLYFSKKDSEDL 460
Query: 469 STDRCFGICVVDVATSRIILGQVMDD----LDCSVLCCLLSELRPVEIIK-PANMLSPET 523
+ + G+ VD+ T + L + + L + C +++P EI P N+
Sbjct: 461 TYE--IGVVCVDITTGKAELINIEEKGDQFLQVRTIVC---QVQPKEIAYLPGNI----- 510
Query: 524 ERAILRHTRNPLVNDLVP---LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA- 579
+ILR+ ++ +VP L+ F D +VL I +I T E LN +V N
Sbjct: 511 PLSILRY-----LSSIVPSIQLTNFRDFVDSVLAINDILE--TFEKLNVPVPDVVNRLCN 563
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
E L C AL GT YL L + L+ F
Sbjct: 564 ESKSLCC--------------------ALSGTFRYLTTILLCDRLIMTGTFTEY------ 597
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
D + +++++ A+++LE+ + S+ GD +L+ L H +T G RLL+ W+ PL N+
Sbjct: 598 DPSVSKHLIVNVGAIKDLELLQ-SQHGDEKNSLFGFLKHTITPGGTRLLKRWITYPLVNT 656
Query: 700 GLIRERQDAVAGLRGVNQPFALEFR------------------KALSRLPDMERLLARLF 741
I ER D+V L N EFR K S+ D ERL+ R+
Sbjct: 657 ERINERLDSVKWLMD-NSEKLYEFRDELRAIERSASSASRGSRKKYSQHLDFERLINRIT 715
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALH------GCEL-----------MDQACSS 784
+ N R + V + + +++ EF+++++ C + M + ++
Sbjct: 716 SGVLQNKRGA---VYFSNVVQRRFDEFVNSMNLFDSVLQCIIRVFGDENLRKDMPKLLAA 772
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
L I + + L +I + L ++V++ + K DW IP G +YD
Sbjct: 773 LTGIKDESSEGFLENIFATTERLRSLVTLDSNGK---DW---------IPVPGNCKEYDD 820
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSS 903
+ + E + + LK K + T+I++V K Y +E PES+ + P E+ SS
Sbjct: 821 LLESINETKLCFDEELKRISKQMNTTAISFVN-NKYRYEVECPESIPKSRFPDSAEITSS 879
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
KKG+ R+ T IK+L+ +L E + + +L L + +F
Sbjct: 880 KKGYVRFHTEEIKQLVYDLEYKEEQLQKSLFPYLHLMCKEF 920
>gi|225445280|ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
Length = 1122
Score = 235 bits (600), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 170/483 (35%), Positives = 248/483 (51%), Gaps = 55/483 (11%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
N G+VS+ S KF +L P R RDA RRRPGD YD RTLY+PPD L+ +S QK
Sbjct: 226 NKNYGEVSDTTS-----KFEWLDPSRKRDANRRRPGDALYDKRTLYIPPDALQKMSASQK 280
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSM 389
Q+W K ++MD V+FFK+GKFYEL+E+DA +G KELD + G+ G E
Sbjct: 281 QYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDE 340
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
V+KL +GY+V +EQ ET EQ K +GS V++R++ VVT T +G +
Sbjct: 341 AVQKLIARGYKVGRMEQLETSEQ----AKARGST-SVIQRKLVHVVTPSTACDGNI---G 392
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
PDA +L+++ E N + S +G VD A + +G + DD C+ L LL ++ P
Sbjct: 393 PDAVHLLSVKEGNNILENGSV--IYGFAFVDCAALKFWIGSISDDASCAALGALLMQVSP 450
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVN-DLVPL---SEFWDAETTVLEIKNIYNRITAE 565
E+I LS E ++A+ +++ + L PL ++F DA + N I +
Sbjct: 451 KEVIYENQELSKEAQKALKKYSLSGFTALKLTPLPLCTDFVDAS-------KVRNLIHLK 503
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K N + +G + D L L G L LK LD+TL
Sbjct: 504 GYFKGSDNSWDHALDG-------------VMHHDLALCALGGLLGHLSRLK---LDDTL- 546
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
++LP + + +D L NLE+F N+ G SSGTLY L++CVT+ GK
Sbjct: 547 --RNGDILPYQVYSGCLR-----MDGQTLVNLEIFSNNADGGSSGTLYKYLDNCVTSSGK 599
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLLR W+ PL + I R + V L + + + L +LPD+ERLL ++ AS +
Sbjct: 600 RLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSF-IAQCLRKLPDLERLLGQVKASVQ 658
Query: 746 ANG 748
++
Sbjct: 659 SSA 661
>gi|209876662|ref|XP_002139773.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
gi|209555379|gb|EEA05424.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
Length = 1210
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 206/715 (28%), Positives = 343/715 (47%), Gaps = 102/715 (14%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR-------NLSEGQKQWWEFKSKHMDKVIFFKMGK 352
+D+ R P D Y+P T+++P + + + +Q+WE K H DK++FFK+GK
Sbjct: 246 KDSNGRYPTDPNYNPSTVWVPDSNSKLAKEEKHHFTPAMQQYWELKKDHFDKLVFFKIGK 305
Query: 353 FYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
FYELF +DA + + DL++M G+ +PH GFPE KL GYRV+VVEQ ETP+
Sbjct: 306 FYELFYIDACLSQRLCDLRWMSGDGKPHVGFPEAALHAYANKLVNYGYRVVVVEQMETPK 365
Query: 412 QLELRRKEKGS--KDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL----TESNQSP 465
+LE R K KDK VKR + T GTL +L N A LM + ++++P
Sbjct: 366 ELEERNKTTSGIKKDKAVKRGVNEFFTNGTLVRPNML--NDMARILMTIYVFSKVNDEAP 423
Query: 466 ASQSTDRCFGICVVDVATSR---IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ + GI VD+ T + IL ++ D ++ L+++++P E++ LS
Sbjct: 424 DNIINE--IGIVCVDITTGKSELSILKEIGDHF--PMVKTLVTQVQPREVV----YLSGN 475
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI---YNRITAESLNKADSNVANSQA 579
ILR+ +N + L+ F D +L K+I + R+ E
Sbjct: 476 LPLPILRYLKN--TTPTIQLTSFRDFMEPILASKDIIEHFQRVNVE-------------- 519
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
+P I++EL + + + +AL GTL YLK L + + F+
Sbjct: 520 -------IPTIINELCT---KSTALCTALSGTLNYLKSILLCDRFILTGNFQQY------ 563
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
+ +K Y++LDA AL++LE+ + ++ GD +L+ L H T G RLLR WL+ PL N+
Sbjct: 564 NPDEKQYLLLDAGALKDLELLQ-TQQGDEKNSLFGFLKHTSTPGGTRLLRKWLSHPLTNA 622
Query: 700 GLIRERQDAVAGLRGVNQPFAL-EFRKALSRLP-----------DMERLLARLFASSEAN 747
I ER D V +N P L F + L + D+ER++ R+ + N
Sbjct: 623 DRINERLDCVEWF--INHPNVLFNFCRELKAISPNGNGSPGSNLDLERIINRITTGALQN 680
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCE-LMDQACSSLGAI------------LENTES 794
R + + + + +K++ +F+++L E +++ S+ G I L +
Sbjct: 681 TRGA---IFFVNVIQKKIVDFLNSLEIFEKVLECIRSNFGDIELRKTMPTLLLALTGVNN 737
Query: 795 RQLHHILTP---GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
Q T G LP I I++ + F V+ N+ I G D+ YD + E
Sbjct: 738 LQCEEKATEPYLGGFLPEISGIVEILRSWF--VKDINNEWIPASGNYDL-YDLNLSLINE 794
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL-RGSVPRDYELRSSKKGFFRY 910
+ L L+ L +T+I +V + K Y +E P+++ R +P+ E+ SSKKGF R+
Sbjct: 795 TKDKLNSELELISSKLNNTTIKFVHM-KYRYEVECPDNIPRSKLPK-LEITSSKKGFIRF 852
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
T IK L+ EL E + +++L +Q F H + + + + + L +++
Sbjct: 853 HTDKIKDLIYELEYREEQLQNSLFPYIQEACKMFHSHFSSFSAISDSLSQLDVLI 907
>gi|164657614|ref|XP_001729933.1| hypothetical protein MGL_2919 [Malassezia globosa CBS 7966]
gi|159103827|gb|EDP42719.1| hypothetical protein MGL_2919 [Malassezia globosa CBS 7966]
Length = 1172
Score = 235 bits (599), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 213/710 (30%), Positives = 329/710 (46%), Gaps = 97/710 (13%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D RD RPGD+ YD RTLY+PP ++ + +KQ+WE K +H D V+FF+ GKFYEL+
Sbjct: 268 DIRDKDMNRPGDMNYDKRTLYIPPSAWKSFTPFEKQFWEIKQQHWDTVLFFQKGKFYELY 327
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G +E DL+ + + G PE +F M KL GY+V V+Q ET +R
Sbjct: 328 EEDALIGHRECDLKLTDRVKMKMVGVPEASFDMFATKLLALGYKVGRVDQCETAVAKGMR 387
Query: 417 --RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCF 474
K +G +V+RE+ VVT GT+ +G +L A+ +SY +++ E + P+ S F
Sbjct: 388 VGEKSRGGGSDIVRRELRHVVTSGTIVDGSVL-ADDLSSYCISIKE-HVLPSGLSE---F 442
Query: 475 GICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNP 534
GIC +D AT+ DD S L LL LR E++ ++SP T LR RN
Sbjct: 443 GICTLDAATAEFRYMSFEDDAVLSQLETLLRSLRIKEVLHEKGVMSPST----LRLIRNT 498
Query: 535 L-----VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ + L P +EF D +T + ++++ + DGL L
Sbjct: 499 VPTTCQITMLKPDTEFLDEISTRARLAHLFDSVP------------------DGLAPL-- 538
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
+ G L ALGG L+YL++ LD L F++ A +VL
Sbjct: 539 --------AEQGGLALCALGGLLWYLEQLNLDTDLCASGNFQVQTAPADAQGA----LVL 586
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
DA +L +L V +N G GTL+ LN C T FG+RL + WL+ PL I R DAV
Sbjct: 587 DAKSLMHLHVLQND-EGSDEGTLHRLLNRCTTPFGRRLFKLWLSSPLSKIEAIEARLDAV 645
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
LR N +A F LPD+ERL +R+ A K + ++F+
Sbjct: 646 DDLRA-NPAWADAFDAFAKSLPDLERLQSRI------------------AAGKCRPRDFL 686
Query: 770 SALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVE---- 825
L+ +A G+ E + + +V++L+ + D + +
Sbjct: 687 -------LVLRAFGRFGSAKEQLLTLLSLSESPVSRPSSVLVTLLREWPDVAELAQMLRS 739
Query: 826 ---ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG---- 878
+N+ G P G YD+A V EA L E+ + + + I+ G
Sbjct: 740 HFVSNDDGSFTPVKGECEAYDAAVDSVHAAEARLE---AEKDRCVAELRISKREAGWKHV 796
Query: 879 --KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSI 936
++Y LEVP R VP + L S K RY+TP ++L+ EL +A + +ALK
Sbjct: 797 GTNEIYQLEVPA--RTKVPAPWILMSQTKACKRYYTPRTRELIRELKEARETRVAALKRF 854
Query: 937 LQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ + F + + + + + A L ++ SL + + L + +C E+
Sbjct: 855 QEDVYVWFRQDLPSYARAIRSVAQLDCLV---SLAKSSMALGTPACRPEL 901
>gi|30687514|ref|NP_850630.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
gi|12643849|sp|Q9SMV7.1|MSH7_ARATH RecName: Full=DNA mismatch repair protein MSH7; Short=AtMSH7;
AltName: Full=MutS protein homolog 7
gi|3757550|emb|CAA07685.1| Msh6-2 protein [Arabidopsis thaliana]
gi|9294039|dbj|BAB01996.1| DNA repair protein MutS [Arabidopsis thaliana]
gi|332643383|gb|AEE76904.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
Length = 1109
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 258/524 (49%), Gaps = 64/524 (12%)
Query: 260 VKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLY 318
V + S+K +PV G+ E E KF +L R RDA RRRP D YD +TL+
Sbjct: 202 VPVLDSNKRLKMLQDPVCGEKKE---VNEGTKFEWLESSRIRDANRRRPDDPLYDRKTLH 258
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQP 378
+PPD + +S QKQ+W KS++MD V+FFK+GKFYEL+E+DA +G KELD +
Sbjct: 259 IPPDVFKKMSASQKQYWSVKSEYMDIVLFFKVGKFYELYELDAELGHKELDWKMTMSGVG 318
Query: 379 HC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVV 435
C G E V+KL +GY+V +EQ ET +Q + R + ++ R++ V+
Sbjct: 319 KCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQAKAR-----GANTIIPRKLVQVL 373
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
T T +EG + PDA +L+A+ E ST +G VD A R +G + DD
Sbjct: 374 TPSTASEGNI---GPDAVHLLAIKEIKMELQKCST--VYGFAFVDCAALRFWVGSISDDA 428
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-RNPLVNDLVPLSEFWDAETTVLE 554
C+ L LL ++ P E++ + LS E ++A+ ++T L P+ + +T
Sbjct: 429 SCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYTLTGSTAVQLAPVPQVM-GDTDAAG 487
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
++NI I + K S N +G L+E LSALG + +
Sbjct: 488 VRNI---IESNGYFKGSSESWNCAVDG---------LNEC-------DVALSALGELINH 528
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV------LDAPALENLEVFENSRSGDS 668
L + L++ L GD+ PY V +D + NLE+F NS G
Sbjct: 529 LSRLKLEDVL------------KHGDIF--PYQVYRGCLRIDGQTMVNLEIFNNSCDGGP 574
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
SGTLY L++CV+ GKRLLR W+ PL + I +R D V ++ + + L
Sbjct: 575 SGTLYKYLDNCVSPTGKRLLRNWICHPLKDVESINKRLDVVEEFTANSESMQIT-GQYLH 633
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+LPD+ERLL R+ +S S+ VL KK L++ + A
Sbjct: 634 KLPDLERLLGRIKSSVR-----SSASVLPALLGKKVLKQRVKAF 672
>gi|389747671|gb|EIM88849.1| DNA mismatch repair protein Msh6 [Stereum hirsutum FP-91666 SS1]
Length = 1195
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 205/700 (29%), Positives = 337/700 (48%), Gaps = 70/700 (10%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
F FL D D + PG YDPRTLY+P + S + Q+WE K H D V+FF+ G
Sbjct: 226 FGFL-LDPMDKDQVHPGQKGYDPRTLYIPKSVWKEFSPFETQFWEIKQNHYDTVLFFQKG 284
Query: 352 KFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KF EL+E DA +G +E DL+ + + G PE +F+ K KGY+V V+Q ET
Sbjct: 285 KFLELYEEDARIGHREFDLKLTQRVKMSMVGVPEMSFNFWAAKFLAKGYKVGRVDQVETA 344
Query: 411 EQLELR---RKEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN-- 462
E+R K KG K +K+V+RE+ V T GTL + ELL+ + A + +++ ES+
Sbjct: 345 LGAEMRLASDKSKGKKTAGEKIVRRELNKVYTNGTLVDEELLT-DEQAGHCVSIRESDPD 403
Query: 463 ----QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
S S FGICV+D ATS L DD+ + L L+ +LR EI+
Sbjct: 404 DFPGASTGSAGGGGAFGICVLDSATSEFNLCAFEDDVCRTRLETLMRQLRVKEIVFTKGN 463
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFW----------DAETTVLEIKNIYNRITAESLN 568
LS ET R L+ L+P + W D ETT+ E+K +Y A S +
Sbjct: 464 LSVETTR---------LLKSLLPATCLWTSLRDKKEGFDYETTIEELKQLYPPSEAGSDS 514
Query: 569 KADSNVANSQAEG-DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
+ + + + E +G+ +P + +++ + +LG ++YL++ +D+ +L
Sbjct: 515 QTQNEESMIEDEAMEGMEGVPKAIRDMLKC----KSAVESLGSMIWYLRQLNIDKDILTM 570
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + M + +VLD L ++EV N+ G G+L L CVT FGKRL
Sbjct: 571 RNFNV-----YDPMKRGQGLVLDGQTLAHIEVLVNN-EGTEEGSLLELLGRCVTPFGKRL 624
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
R WL PL I R DA+ L + F +F K LPD+ER+++R+ A +
Sbjct: 625 FRIWLCMPLREIKDINARLDAIEDLMR-DLSFEEQFVKVAKGLPDLERIVSRIHAKN--- 680
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL 807
++++F+ L + + + L E+ S+ + +L +
Sbjct: 681 ---------------CKVKDFLKVLSAFRRLSEGLAELADASESFNSKTILGLL---RSA 722
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL 867
P + +K+ + F + +N+ +IP G D YD ++KE+E L K LK+ +K L
Sbjct: 723 PDLEPHIKNVQSKFKRPDKDNTDELIPVEGKDEAYDEISAEIKELEDELEKELKKLKKQL 782
Query: 868 G-DTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
G D + + G K++YL++ ++ + +PR++ + K R+ P++ + L +A
Sbjct: 783 GCDLTYWHSAQGTKEIYLVQT-KAGQEDIPRNWVKSGATKAATRWVVPSLSATIRSLKEA 841
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ + +KS RL +F + W + + A L +
Sbjct: 842 RETRNATIKSYKLRLFEEFDKDRGVWLRAIRVLAELDCLF 881
>gi|297835538|ref|XP_002885651.1| hypothetical protein ARALYDRAFT_479958 [Arabidopsis lyrata subsp.
lyrata]
gi|297331491|gb|EFH61910.1| hypothetical protein ARALYDRAFT_479958 [Arabidopsis lyrata subsp.
lyrata]
Length = 1119
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 183/570 (32%), Positives = 269/570 (47%), Gaps = 87/570 (15%)
Query: 230 GRKRKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA 289
G + S +K+ DG V D V + S+K +PV G E+ E
Sbjct: 173 GIRPSVSRLKRVLEDGMTVKED-------KVPVLDSNKRLKMLQDPVCG---EKKEVNEG 222
Query: 290 DKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
KF +L P R RDA RRRP D YD +TLY+PPD + +S QKQ+W KS++MD V+FF
Sbjct: 223 TKFEWLEPSRIRDANRRRPDDPLYDRKTLYIPPDVFKKMSASQKQYWSVKSEYMDIVLFF 282
Query: 349 KMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVE 405
K+GKFYEL+E+DA +G KELD + C G E V+KL +GY+V +E
Sbjct: 283 KVGKFYELYEVDAELGHKELDWKMTMSGVGKCRQVGISESGIDEAVQKLLARGYKVGRIE 342
Query: 406 QTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
Q ET +Q + R + ++ R++ V+T T +EG + PDA +L+A+ E
Sbjct: 343 QLETSDQAKAR-----GANTIIPRKLVQVLTPSTASEGNI---GPDAVHLLAIKEIKMEL 394
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
ST +G VD A R +G + DD C+ L LL ++ P E++ + LS E ++
Sbjct: 395 EKCST--VYGFAFVDCAALRFWVGSISDDASCAALGALLMQVSPKEVVYDSKGLSREAQK 452
Query: 526 AILRHT-RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
A+ ++T + L P+S+ +T ++NI I + K S N +G
Sbjct: 453 ALRKYTLTGSMAVQLAPVSQVM-GDTDAAGVRNI---IESNGYFKGSSESWNCAVDG--- 505
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
L+E LSALG + +L + L++ L GD+
Sbjct: 506 ------LNEC-------DVALSALGELINHLSRLKLEDVL------------KHGDIF-- 538
Query: 645 PYMV------LDAPALENLEVFENSRSGDSSG----------------TLYAQLNHCVTA 682
PY V +D + NLE+F NS G SG TLY L++CV+
Sbjct: 539 PYQVYRGCLRIDGQTMVNLEIFNNSCDGGPSGKHRRKYSTTWYGSLVRTLYKYLDNCVSP 598
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
GKRLLR W+ PL + I +R D V N + +LPD+ERLL R+ +
Sbjct: 599 TGKRLLRNWICHPLKDVVSINKRLDVVEEFTA-NSEIMQTTGQYFHKLPDLERLLGRIKS 657
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
S + S+ VL KK L++ + A
Sbjct: 658 SVQ-----SSASVLPALLGKKVLKQRVKAF 682
>gi|118361141|ref|XP_001013801.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89295568|gb|EAR93556.1| MutS domain III family protein [Tetrahymena thermophila SB210]
Length = 1139
Score = 234 bits (596), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 190/678 (28%), Positives = 323/678 (47%), Gaps = 88/678 (12%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
R+D+++ G+ YDP TLY+PP L+ KQ+W+ K+KH DK+I FKMGKFYELF
Sbjct: 197 RKDSRQIPFGNPQYDPTTLYIPPQEFSKLTSAMKQYWQIKAKHFDKIILFKMGKFYELFY 256
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK 418
DA + + LD+ + E HCGFPE+ KL + GY+V+VVEQT
Sbjct: 257 EDAIIATRLLDITFTNKE-LHCGFPEKALEKFASKLVQFGYKVVVVEQT----------- 304
Query: 419 EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICV 478
K + +V R+I ++TKGT+ N D YL+ + Q T++ FGI V
Sbjct: 305 SKKTTTGIVDRDITQIITKGTIN-FTFEEQNHDPKYLLVI--------RQKTNQEFGIIV 355
Query: 479 VDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII-KPANMLSPETERAILRHTRNPLVN 537
+ TS+I +G + DD + L L +P EI+ P N+ S IL+ ++
Sbjct: 356 YESFTSKIQVGLLQDDKTQTRLKSFLCVTKPQEIVYDPGNITSD-----ILKILKSQYFQ 410
Query: 538 DLV-PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIS 596
++ P+ + D +T L I + G + P L ++ +
Sbjct: 411 SVMSPMRDNKDQWSTQLATFYIEKQF------------------GSEVQKYPQELRDIRT 452
Query: 597 TGDSGSQVL----SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
+ QV+ +AL G Y+ + E++L + E + C F + M+LD+
Sbjct: 453 NDEIRGQVINLKYAALAGFFSYMDSTLQLESILNSS--EYVECD-FDNKQFSQRMILDSQ 509
Query: 653 ALENLEVFENSRSGDSS---------GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
AL++LE+FENS++ ++ GTL L++ T +GKR+L+ W+ PL + I
Sbjct: 510 ALQHLEIFENSQTALTTTFQQVDQKKGTLLNYLDYTKTPYGKRMLKKWVCSPLIDISAIN 569
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
+R DA+ ++ N +F+ ++R D+ERL + ++ S +++ K V+YE+ +
Sbjct: 570 DRYDAIEDIQN-NLAMKDKFQYGIARYADIERLCSSIYRYS-VKQKHAEKAVMYENISSA 627
Query: 764 QLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPG-KG-------LPAIVSIL 814
+L+EF + ++ + +++ + EN +S++L + T KG LP + S +
Sbjct: 628 RLKEFKNLINSMKEIEKLIEETFMVNQENFKSQRLKRLCTYRLKGDPKLSGDLPKVSSFI 687
Query: 815 KHFKD--AFDWVEANNSGRI---IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGD 869
K +D D E I +P G +YDS ++K + L ++L++ +
Sbjct: 688 KVLEDIIVLDSKEKIAGKYIEQPVPKDGFCQEYDSIRLQIKAYQDELDQYLEQLKVKFKT 747
Query: 870 TSITYVTIGKDLYLLEVPESLRGSV--PRDYELRSSKKGFFRYWTPNIKKLLGELSQAES 927
I+Y + Y ++V ++L + P D+ L+S F R+ + + E
Sbjct: 748 NDISYAFLNNRQYDIQVNKTLFDKIQKPADFSLQSHSGSFQRFTS----RFTSEKVAFIE 803
Query: 928 EKESALKSILQRLIGQFC 945
E E LK IL FC
Sbjct: 804 ELEEQLKEIL----SNFC 817
>gi|403411535|emb|CCL98235.1| predicted protein [Fibroporia radiculosa]
Length = 1254
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 206/723 (28%), Positives = 324/723 (44%), Gaps = 92/723 (12%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD RPG+ YDPRTLY+P + + +KQ+WE K H D ++FF+
Sbjct: 300 DPFSFL-QDVRDKDGLRPGEPGYDPRTLYVPAKAWKEFTPFEKQFWEIKQNHFDTILFFQ 358
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKG-----EQPHCGFPE-RNFSMNVEKLARKGYRVLV 403
GKF EL+E DA +G E DL++ + E F R+ L + Y+V
Sbjct: 359 KGKFLELYEEDARIGHTEFDLKFTREPLTAVESDRLAFRRCRSIFGPPNSLQKAWYKVGR 418
Query: 404 VEQTETPEQLELR-------------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
V+Q ET E+R E +KDK+V+RE+ V T GTL + ELL+ +
Sbjct: 419 VDQAETALGAEMRLAADKKGGKTKSVAAEDKAKDKIVRRELNKVYTNGTLVDAELLT-DE 477
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
A + +++ E + A + + FGICV+D +TS L DD+ + L ++ +LRP
Sbjct: 478 QAGHCVSIREEDIE-ADKDGRQGFGICVLDSSTSEFNLSTFEDDVCRTRLETMMRQLRPK 536
Query: 511 EIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK- 569
EII LS T R L+ ++P + W T++ E + + T + L +
Sbjct: 537 EIIFTKGNLSVSTTR---------LLKVILPGNCLW---TSLRESEGLAYEKTLKELTRL 584
Query: 570 --ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRF 627
AD + A+ + +P + ++ +GS+ L+ L +D+ +L
Sbjct: 585 FPADDDNADLHSIHGLTDTVPTAIRDV-----AGSKYLNTLN----------IDKDILSM 629
Query: 628 AKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
F + + M + +VLD L ++EV NS G G+L QL+ C+T GKRL
Sbjct: 630 KNFNI-----YDPMKRGQGLVLDGQTLAHIEVLLNS-EGTEEGSLLKQLSRCITPSGKRL 683
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSEA 746
R WL PL I R DAV L ++ P F +F K LPD+ER+++R+ A
Sbjct: 684 FRIWLCMPLREVSDITARLDAVQDL--LDHPTFEQDFTKIAKGLPDLERVVSRIHA---- 737
Query: 747 NGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG 806
++ K + + A G + L + + ES Q IL +
Sbjct: 738 -----------KNCKVKDFLKVLEAFKGLSV------GLAELADTAESFQSKTILGLLRS 780
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P ++ LKH K F ++ +IP G D +D ++++ +E L LK K
Sbjct: 781 APNLLPNLKHVKSMFK-KSGESADELIPEDGKDEAFDEVMEEIQVLETELDDALKRLEKK 839
Query: 867 LGDTSITY---VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+G ++Y K++YL++ S VPRD+ K RY P + + +L
Sbjct: 840 VG-IKLSYWHSAQGTKEIYLVQTKAS--EDVPRDWTKSGGTKAVTRYIVPFLAPTIRKLK 896
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCS 983
+A + + +K RL +F + W + V A L + SL A L C
Sbjct: 897 EARENRNTVVKEFKARLYAEFDADRSVWLRAVRVLAELDCLF---SLAKASSALGEPCCR 953
Query: 984 SEM 986
E
Sbjct: 954 PEF 956
>gi|403178118|ref|XP_003336563.2| hypothetical protein PGTG_17874 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173346|gb|EFP92144.2| hypothetical protein PGTG_17874 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1135
Score = 233 bits (595), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 201/705 (28%), Positives = 323/705 (45%), Gaps = 103/705 (14%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D +DA G YDPRTL++ +++ + Q+WE K KF EL+
Sbjct: 214 DIKDADGNPMGSPEYDPRTLFISKKDWASMTPFEVQFWEIKR-----------SKFAELY 262
Query: 358 EMDAHVGAKELDLQYMKG-EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
E DA +G +E DL+ K + G PE + + K KGY+V V+Q ET E+R
Sbjct: 263 EGDALIGHQEFDLKITKRVKMSMVGVPETSVDFWIAKFLAKGYKVGKVDQCETALGAEMR 322
Query: 417 RK--------------EKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
K +KGS ++V+RE+ +VVT GT+ +G +L+ + A+ L+A+ ES
Sbjct: 323 NKGSLPTSKYAKPPPQQKGSGKEIVRRELRSVVTSGTIVDGNILT-DDSATCLLAIKEST 381
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
S FG+ ++D AT+ L D + + L ++S +P EI+ + LSP
Sbjct: 382 NSDLP-----VFGVIIMDAATAEFNLTHFEDSANRTHLETIMSRFKPKEILHEKSGLSPA 436
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
T R + + + EF + + V + ++ Q G
Sbjct: 437 TLRVLRNTASSDCTWTALKSDEFLEPDECVCRLTELF------------------QESG- 477
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
G + ++ + ++ + + ALGG L+YLK+ LD+ +LL C +M
Sbjct: 478 ------GQIPQVFQSFNNKLETMQALGGLLWYLKQLNLDK--------DLLTCKNVKEMD 523
Query: 643 K---KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNS 699
M LD + +LE+ ++ S +S L LN CVT+FGKRL R WL PL +
Sbjct: 524 AFRCSRTMHLDGKTISDLELLQSDGSEESR--LLKLLNRCVTSFGKRLFRHWLCSPLQDG 581
Query: 700 GLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
IR R DAV L +N P E LS LPD+ERL++R+ A +
Sbjct: 582 DAIRARLDAVDFL--MNNPSFEEKFSTLSGLPDLERLISRVHAGACT------------- 626
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD 819
+ F+ L E + L +++ T + L ++ LP +L++ +D
Sbjct: 627 -----VPNFLKVLKAFEKIYSTIQELRQLIDETPAMLLKELM---DALPDTDKLLQNLED 678
Query: 820 AFDWVEANNSGR-IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
F N+ R ++P G D YD A ++ +E E +L LK +KLL + Y IG
Sbjct: 679 MFTL---NDDRRELLPLEGKDESYDMALEEEREAEKALKAELKAAKKLLKTDDVVYKDIG 735
Query: 879 -KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSIL 937
KD+Y ++V ++ P ++ S K RY++P +L+ +L QA +K ALK
Sbjct: 736 IKDIYQIQVSAKVKA--PSNWTKMSGTKDCARYYSPQSAQLVKKLKQAREKKSCALKDFH 793
Query: 938 QRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSC 982
++ F E++ W Q+V + A L +L SL A + L +C
Sbjct: 794 LKVFLAFDENYLIWLQVVKSVAQLDCVL---SLAKASIGLGETTC 835
>gi|449521080|ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
MSH7-like [Cucumis sativus]
Length = 1095
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 239/462 (51%), Gaps = 43/462 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF +L P + RDA RRRP YD +TLY+PPD L+ +S QKQ+W K ++MD ++FFK
Sbjct: 231 KFEWLNPSQVRDANRRRPDHPLYDXKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFK 290
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E DA +G KELD + C G PE V+KL +GY+V VEQ
Sbjct: 291 VGKFYELYEQDAEIGHKELDWKMTLSGVGKCRQVGVPESGIDEAVQKLVARGYKVGRVEQ 350
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
E+ EQ K +G+ + V+ R++ V T T +G++ PDA +L+A+ E +S
Sbjct: 351 LESAEQ----TKSRGA-NSVIPRKLVQVTTPSTKADGDI---GPDAVHLLAIKE--ESCG 400
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ +G VD A + G + DD C+ L LL ++ P EII A LS ET +
Sbjct: 401 LDNNSISYGFAFVDCAALKFWTGSIKDDASCAALGALLMQVSPKEIIYEARGLSKETHKV 460
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ +++ P + + L+ T LE + + +++ K N+ N ++ T
Sbjct: 461 LKKYS--PTGSTALELTS-GSPVTNFLEASEVKLLVQSKAYFKGSLNLWNHES-----TV 512
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
I L ALGG + ++ + LD+ L +LLP + +
Sbjct: 513 HDDI-------------ALCALGGLINHMSRLMLDDVL---RNGDLLPYQVY-----RGC 551
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+ +D + NLE+F N+ G SGTLY L++CVT+ GKRLLR W+ PL + I R
Sbjct: 552 LRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRL 611
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ V L + L L +LPD+ERLL ++ A+ +++
Sbjct: 612 NVVEELMAQSDIMVLLGTTYLRKLPDLERLLGQIKATVQSSA 653
>gi|449443325|ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-like [Cucumis sativus]
Length = 1095
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/462 (33%), Positives = 239/462 (51%), Gaps = 43/462 (9%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF +L P + RDA RRRP YD +TLY+PPD L+ +S QKQ+W K ++MD ++FFK
Sbjct: 231 KFEWLNPSQVRDANRRRPDHPLYDKKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFK 290
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E DA +G KELD + C G PE V+KL +GY+V VEQ
Sbjct: 291 VGKFYELYEQDAEIGHKELDWKMTLSGVGKCRQVGVPESGIDEAVQKLVARGYKVGRVEQ 350
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPA 466
E+ EQ K +G+ + V+ R++ V T T +G++ PDA +L+A+ E +S
Sbjct: 351 LESAEQ----TKSRGA-NSVIPRKLVQVTTPSTKADGDI---GPDAVHLLAIKE--ESCG 400
Query: 467 SQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERA 526
+ +G VD A + G + DD C+ L LL ++ P EII A LS ET +
Sbjct: 401 LDNNSISYGFAFVDCAALKFWTGSIKDDASCAALGALLMQVSPKEIIYEARGLSKETHKV 460
Query: 527 ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC 586
+ +++ P + + L+ T LE + + +++ K N+ N ++ T
Sbjct: 461 LKKYS--PTGSTALELTS-GSPVTNFLEASEVKLLVQSKAYFKGSLNLWNHES-----TV 512
Query: 587 LPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
I L ALGG + ++ + LD+ L +LLP + +
Sbjct: 513 HDDI-------------ALCALGGLINHMSRLMLDDVL---RNGDLLPYQVY-----RGC 551
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
+ +D + NLE+F N+ G SGTLY L++CVT+ GKRLLR W+ PL + I R
Sbjct: 552 LRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRLLRLWICHPLKDVEEINNRL 611
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ V L + L L +LPD+ERLL ++ A+ +++
Sbjct: 612 NVVEELMAQSDIMVLLGTTYLRKLPDLERLLGQIKATVQSSA 653
>gi|313227995|emb|CBY23144.1| unnamed protein product [Oikopleura dioica]
Length = 1136
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 191/675 (28%), Positives = 310/675 (45%), Gaps = 64/675 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D K RR DV YDP TL++P F+++L+ G WW+ KS++ D VIF+K+GKFYEL+ M
Sbjct: 228 KDNKGRRADDVDYDPTTLHVPDAFIKSLTPGMGNWWKIKSRNFDVVIFYKVGKFYELYHM 287
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
DA +G + + +MKG+ H GFPE F L KG++V VEQTET E + R KE
Sbjct: 288 DAVIGVENCGVTFMKGKFAHAGFPEMRFDHFASMLVTKGFKVARVEQTETQESNKERVKE 347
Query: 420 ----KGSKDKV------VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
KG K+ +RE+CA+VT GT +++ D + L S
Sbjct: 348 SKDWKGVTKKLDKFEKQTRREVCAIVTPGTRVAA--FNSHDDFGHKEGLFAS-----VFE 400
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
++ G+ +VD + S +I+GQ DD S L LLS+ +++K +L
Sbjct: 401 CEKTIGVALVDTSMSELIVGQFGDDTFFSNLRTLLSQRHISQLMKQKKACISPNLHQVLA 460
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
T + +D +P F D V + K I I + +
Sbjct: 461 ATSKGICSDDLPDKAFLD----VAKTKKIIREIDNDEIK--------------------- 495
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG--FGDMAKKPYM 647
L +L+ D+ ALG L +LK+ + +LR + F S + + M
Sbjct: 496 -LDKLVEICDANPVGTQALGALLTHLKRYEIIHEVLRTSTFIQYETSDRLLRKINTQQRM 554
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
++DA L NL V + G G+ +L+ C +A GKR L + P N +IR RQ
Sbjct: 555 IMDAATLINLGVTQGD-DGTERGSCLRKLDTCCSAGGKRKLWETVISPPANPDVIRHRQK 613
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN----KVVLYEDAA-- 761
+ L NQ F + RK +S PD+ RL++R F + R S+ + V+YE+
Sbjct: 614 CIKALMD-NQEFCKDARKLISGFPDLARLISR-FGNLSIGIRPSDHPDKRAVMYEEILYN 671
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS-ILKHFKDA 820
+++ + F L + D A EN L IL ++ +L +++
Sbjct: 672 RQKTRSFCRVLSSFKDFDAWIKKQSATNEN-----LLKILQLVDNENIVIEDLLANWRKT 726
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A ++ P G + +D A K++K I+ E G + + GK
Sbjct: 727 FDMEKAKREEKLTPKEGANPPFDRAVKEIKRIQNEAEVFRTEVADNYGHAKL--LKSGKL 784
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
++++V ++++ P ++ KGF +Y P + L E+S+ + K+ AL +
Sbjct: 785 HFVIQVRDTVK--TPNEWTSIGLTKGFKKYQAPELDVLNKEMSRYINLKDMALSEASSVI 842
Query: 941 IGQFCEHHNKWRQMV 955
G+F + N+W +V
Sbjct: 843 FGEFYKTSNRWLAIV 857
>gi|218187626|gb|EEC70053.1| hypothetical protein OsI_00652 [Oryza sativa Indica Group]
Length = 1216
Score = 233 bits (593), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 189/602 (31%), Positives = 284/602 (47%), Gaps = 87/602 (14%)
Query: 238 VKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGP 297
+K+ + D D SP P K K+ +PV V + + KF +L P
Sbjct: 318 LKRVQEDQRVTTNDSCSPFWGPNK-----KVKPAQCSPVENKVHDEMAESARSKFEWLNP 372
Query: 298 DR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYEL 356
RDA RRR D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL
Sbjct: 373 SNIRDANRRRLADPLYDKTTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYEL 432
Query: 357 FEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQL 413
+E+DA +G KELD + C G E + VEKL +GY+V +EQ E+ +Q
Sbjct: 433 YEVDAEIGQKELDWKMTISGVGKCRQVGISESGIDVAVEKLLARGYKVGRIEQMESADQ- 491
Query: 414 ELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRC 473
K +GS + V+ R++ V T T+ + + DA +L++L E + + R
Sbjct: 492 ---AKSRGS-NSVILRKLVHVSTPSTVGDSNI---GADAVHLLSLKEIT---LASNGSRV 541
Query: 474 FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN 533
+G +D A +I +G V DD + L LL ++ P EII + LS ET R I ++
Sbjct: 542 YGFAFLDYAALKIWVGSVHDDDTFAALGALLVQVSPKEIIYETSGLSKETHRLIKKYASA 601
Query: 534 PLVN-DLVPLSEFWDAET----TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTC-L 587
V L PL + ++ T+++ + + T+ L + NS D + C L
Sbjct: 602 GSVKMQLTPLYGLYFSDVSEIQTLIDSRGYFKASTSSWL-----SALNSSVNKDAVICAL 656
Query: 588 PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYM 647
G+L + + G+ L Y + T LR
Sbjct: 657 GGLLEDALKNGE-----------VLAY----HVYRTCLR--------------------- 680
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
+D L NLE+F N+ G SSGTLY LNHC+T GKRLLR W+ PL + I ER D
Sbjct: 681 -MDGQTLVNLEIFSNNFDGGSSGTLYKHLNHCITPCGKRLLRRWICHPLKDIDAINERLD 739
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLY--EDAAKKQL 765
V G N + L ++PD+ERLL R+ ++ G +S ++ + E K+++
Sbjct: 740 IVEGFIQ-NCGLGSVTLEHLRKVPDLERLLGRVKSTV---GLSSAVLLPFVGEKILKRRI 795
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHI--LTPGKGLPAIVS---ILKHFKDA 820
+ F + G +G L + RQ H I L+ +P + S ++ HF++A
Sbjct: 796 KTFGMLVKGLR--------VGIDLLDILQRQDHGISALSKAVDIPTLSSLGELIHHFEEA 847
Query: 821 FD 822
D
Sbjct: 848 ID 849
>gi|339248295|ref|XP_003375781.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
gi|316970814|gb|EFV54686.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
Length = 884
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 197/649 (30%), Positives = 281/649 (43%), Gaps = 117/649 (18%)
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
F +GKFYEL+ MDA VG K L+L +MKG+ HCGFPE +F ++L G++V VEQT
Sbjct: 43 FPVGKFYELYHMDAVVGVKNLNLSFMKGDYAHCGFPEVSFDRFSDQLIEHGFKVARVEQT 102
Query: 408 ETPEQLELRRKEK--GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
ETPE L+ R ++ SK+KV++REIC ++T+GT T Y TE +
Sbjct: 103 ETPEMLQKRAHQELLPSKEKVIRREICRIITRGTKT------------YNFLETEDDNVQ 150
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
SQ D C D S L +L+ PV+I+ P LSP+
Sbjct: 151 ISQFEDDC----------------------DYSQLRTVLASYPPVQILFPRGQLSPQMLN 188
Query: 526 AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLT 585
+ N L+P EFW A T+ + + D G
Sbjct: 189 MFKYNLNNVDKEALIPKVEFWTAADTL-------RNLALDCYFGVDDR---------GNV 232
Query: 586 CLPGILSELISTGDSGSQV--------LSALGGTLFYLKKSFLDETLLRFAKFELL--PC 635
P L+ I D Q +S+ G ++YLK+ +D +LR FEL P
Sbjct: 233 DWPEALATCIDQQDLFQQTPKPQYALGISSFGAIVWYLKECLIDHDILRLKNFELYSPPA 292
Query: 636 S-GFGDMA------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ FG ++ K YMVL+ L NL++ R + T+Y ++N C TA GKRLL
Sbjct: 293 TVEFGKLSSCHQPLKNRYMVLNDITLRNLDIVNFERKKSTKVTVYDEINLCKTAMGKRLL 352
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR----LFASS 744
WL PL + I +RQ AV L + F K L +PD+ERLL + LF S
Sbjct: 353 HFWLCNPLCDLQEIEQRQVAVRNLIEQTELFE-SLIKQLREIPDLERLLQKMSSGLFRSR 411
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGC-----ELMDQACSSL--GAILENTESRQL 797
S++ + Q + L C + Q + G L ++ Q
Sbjct: 412 HVQQTQSSRFCPINQRLCQSQQANANCLQFCITNPVQTTTQHFVGMFDGMFLSSSSLLQA 471
Query: 798 HHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
I G K P I S +++F++AFD A G IIP GVD D+A + + E L
Sbjct: 472 LFIRKGGAKCFPDIQSDVQYFQNAFDHETAKTIGSIIPEEGVDPALDAANQAIVHAEKQL 531
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+LK +K R + GF RY T +
Sbjct: 532 DNYLKTIQK-----------------------------------RLNCSGFKRYTTKELD 556
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L+ L+ +E+++E ALK I++RL FCE KW V A L ++L
Sbjct: 557 DLVKLLAASEADREVALKDIMRRLFANFCERKVKWYAAVENIATLDVLL 605
>gi|242051827|ref|XP_002455059.1| hypothetical protein SORBIDRAFT_03g003700 [Sorghum bicolor]
gi|241927034|gb|EES00179.1| hypothetical protein SORBIDRAFT_03g003700 [Sorghum bicolor]
Length = 1035
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 236/468 (50%), Gaps = 63/468 (13%)
Query: 285 SAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMD 343
SAR KF +L P RDA RRRP D YD TL++PPD LR +S QKQ+W K K+MD
Sbjct: 153 SARS--KFEWLNPFAIRDANRRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMD 210
Query: 344 KVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYR 400
V+FFK+GKFYEL+E+DA +G KE D + C G E V+KL +GY+
Sbjct: 211 VVLFFKVGKFYELYELDAEIGQKEFDWKMTANGVGKCRQVGISESGIDDAVDKLVARGYK 270
Query: 401 VLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE 460
V +EQ E+ Q + R V++R++ V T T + + DA +L+AL E
Sbjct: 271 VGRIEQMESANQAKAR-----GLHSVIERKLVHVSTPSTAAD----NIGTDAVHLLALKE 321
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
+ S+ + +G +D A +I +G V DD + L LL ++ P E+I + ++
Sbjct: 322 VT---LASSSSQVYGFAFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGIT 378
Query: 521 PETERAILRHTRNPLVN-DLVPLS--EFWDAETTVLEI--KNIYNRITAESLNKADSNVA 575
ET+R I ++ V L PLS +F DA + I K +N T L+ D V
Sbjct: 379 KETQRTIRKYASAGSVKMQLTPLSGIDFSDASQIRMLIHSKGFFNASTESWLSALDCAV- 437
Query: 576 NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
+ V+ ALGG + +L + L + L E+LP
Sbjct: 438 ------------------------NRDVVICALGGLIGHLTRLMLHDAL---KNGEVLPY 470
Query: 636 SGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARP 695
+ K + +D L NLE+F N+ +G SSGTLY LNHCVTA GKRLLR W+ P
Sbjct: 471 HVY-----KTCLRMDGQTLVNLEIFSNNFNGGSSGTLYKHLNHCVTASGKRLLRRWICHP 525
Query: 696 LYNSGLIRERQDAVAGLR---GVNQPFALEFRKALSRLPDMERLLARL 740
L + I +R D V G G+ P L + L ++PD+ERLL ++
Sbjct: 526 LKDIDAINKRLDVVEGFIQNCGLG-PTTLGY---LRKIPDLERLLGQV 569
>gi|297738843|emb|CBI28088.3| unnamed protein product [Vitis vinifera]
Length = 1126
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 170/485 (35%), Positives = 248/485 (51%), Gaps = 57/485 (11%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
N G+VS+ S KF +L P R RDA RRRPGD YD RTLY+PPD L+ +S QK
Sbjct: 228 NKNYGEVSDTTS-----KFEWLDPSRKRDANRRRPGDALYDKRTLYIPPDALQKMSASQK 282
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSM 389
Q+W K ++MD V+FFK+GKFYEL+E+DA +G KELD + G+ G E
Sbjct: 283 QYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDE 342
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
V+KL +GY+V +EQ ET EQ K +GS V++R++ VVT T +G +
Sbjct: 343 AVQKLIARGYKVGRMEQLETSEQ----AKARGST-SVIQRKLVHVVTPSTACDGNI---G 394
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
PDA +L+++ E N + S +G VD A + +G + DD C+ L LL ++ P
Sbjct: 395 PDAVHLLSVKEGNNILENGSV--IYGFAFVDCAALKFWIGSISDDASCAALGALLMQVSP 452
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVN-DLVPL---SEFWDAETTVLEIKNIYNRITAE 565
E+I LS E ++A+ +++ + L PL ++F DA + N I +
Sbjct: 453 KEVIYENQELSKEAQKALKKYSLSGFTALKLTPLPLCTDFVDAS-------KVRNLIHLK 505
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K N + +G + D L L G L LK LD+TL
Sbjct: 506 GYFKGSDNSWDHALDG-------------VMHHDLALCALGGLLGHLSRLK---LDDTL- 548
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG--TLYAQLNHCVTAF 683
++LP + + +D L NLE+F N+ G SSG TLY L++CVT+
Sbjct: 549 --RNGDILPYQVYSGCLR-----MDGQTLVNLEIFSNNADGGSSGKCTLYKYLDNCVTSS 601
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
GKRLLR W+ PL + I R + V L + + + L +LPD+ERLL ++ AS
Sbjct: 602 GKRLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSF-IAQCLRKLPDLERLLGQVKAS 660
Query: 744 SEANG 748
+++
Sbjct: 661 VQSSA 665
>gi|356522732|ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
Length = 1079
Score = 230 bits (587), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 172/511 (33%), Positives = 256/511 (50%), Gaps = 57/511 (11%)
Query: 235 SSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHF 294
+S VK+S+ DG+ + + S K D + D++++ A A KF +
Sbjct: 165 ASHVKRSREDGSKFGS-----------LLNSGKRVRFLDGSLELDMTKK-EAEVASKFEW 212
Query: 295 LGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKF 353
L P R RDA RRP + YD TLY+PP+ L +S QKQ+W K K+MD ++FFK+GKF
Sbjct: 213 LDPSRIRDANGRRPDNPLYDRTTLYIPPEVLGKMSASQKQYWSVKCKYMDVLLFFKVGKF 272
Query: 354 YELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETP 410
YEL+EMDA +G KELD + C G E V KL +GY+V VEQ ET
Sbjct: 273 YELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVLKLVARGYKVGRVEQLETS 332
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+ K +G+ + VV+R++ V+T T +G + PDA +L+A+ E N + +
Sbjct: 333 GE----AKSRGA-NSVVRRKLVQVLTPSTNVDGNI---GPDAVHLLAIKEENNVLDNGAV 384
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+G VD A R +G + DD CS L LL ++ P E+I + LS E ++A+ +
Sbjct: 385 --VYGFAFVDCARLRFWVGSIDDDASCSALGALLVQVSPKEVIYDSRGLSKEAQKALRKF 442
Query: 531 TRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ N P+ D EI+++ I ++ K S++ L
Sbjct: 443 SLNGSRTLQFTPVQSITDLVNN--EIRDL---IHSKGYFKGSSHL------------LDH 485
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
+LS +I LSALG + +L + LD+ L +L P + K + +
Sbjct: 486 VLSNVIHR----EITLSALGRLIGHLDRLMLDDVL---QNGDLYPYQVY-----KGCLKM 533
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
D P + NLE+F N+ G SG+LY L+ CVT+ GKRLLR W+ PL + +I +R D V
Sbjct: 534 DGPTMINLELFFNNEDGGKSGSLYNCLDKCVTSSGKRLLRNWICCPLIDPEIINKRLDVV 593
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARL 740
L N + L RLPD+E LL R+
Sbjct: 594 DDLMA-NPEIVPHIAQHLRRLPDLEHLLGRI 623
>gi|336110048|gb|AEI16792.1| mutS protein 6 [Leiocephalus barahonensis]
Length = 361
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 197/372 (52%), Gaps = 33/372 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS+H D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L A+ YL + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFADTHNKYLFCVKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKSLLPSAVQEGLTSGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T++E ++ AE+ S + + AE D L PG SEL
Sbjct: 241 NASKTLKTLIEEGYFQDKENAEAETVLPSVIRSMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLDA 651
LSALG +FYLKK +D+ +L AKFE + P S F ++ MVLD
Sbjct: 292 ALSALGCCVFYLKKCIIDKEILSMAKFEEYIPVDTNIGKGIKPSSIFAKTTQR--MVLDG 349
Query: 652 PALENLEVFENS 663
L NLE+ EN+
Sbjct: 350 VTLANLEILENA 361
>gi|414876024|tpg|DAA53155.1| TPA: MUS2 protein [Zea mays]
Length = 1184
Score = 229 bits (585), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 245/488 (50%), Gaps = 65/488 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RDA +RRP D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL+E+
Sbjct: 338 RDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYELYEL 397
Query: 360 DAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA +G KELD + C G E V+KL +GY+V +EQ E+ Q + R
Sbjct: 398 DAEIGQKELDWKMTVSGVGKCRQVGISESGIDDAVDKLIARGYKVGRIEQMESANQAKAR 457
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
V++R++ V T T + + DA +L+AL E + S + FG
Sbjct: 458 -----GVHSVIERKLVHVSTPSTAVD----NIGTDAVHLLALKEVT---LASSGFQVFGF 505
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV 536
+D A +I +G V DD + L LL ++ P E+I + +S ET+R I ++ V
Sbjct: 506 AFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGISKETQRTIRKYASAGSV 565
Query: 537 N-DLVPLS--EFWDAETT--VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
L PLS +F DA ++ K +N T L+ D +
Sbjct: 566 KMQLTPLSGIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTM----------------- 608
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
+ V+ ALGG + +L + L + L E+LP + K + +D
Sbjct: 609 --------NQDVVICALGGLIGHLTRLMLHDAL---KNGEVLPYHVY-----KTCLRMDG 652
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L NLE+F N+ +G SSGTLY LNHCVTA GKR+LR W+ PL + I +R D V G
Sbjct: 653 QTLVNLEIFSNNFNGGSSGTLYKHLNHCVTASGKRMLRRWICHPLKDIDAINKRLDVVEG 712
Query: 712 LR---GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS--NKVVLYEDAAKKQLQ 766
G+ P L + L ++PD+ERLL ++ ++ G +S + E KK+++
Sbjct: 713 FIQNCGLG-PTTLGY---LQKIPDLERLLGQVRSTV---GLSSLLQLPFIGEKIIKKRIK 765
Query: 767 EFISALHG 774
FI ++G
Sbjct: 766 TFIMLING 773
>gi|357136621|ref|XP_003569902.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Brachypodium
distachyon]
Length = 1232
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 165/491 (33%), Positives = 245/491 (49%), Gaps = 59/491 (12%)
Query: 262 IFGSDK-LSNGFDNPVMGDVSERFSAREADKFHFLGP-DRRDAKRRRPGDVYYDPRTLYL 319
++GS+K + + +P V + + KF +L P + RD +RRP D YD RTL++
Sbjct: 344 LWGSNKKVKSAHCSPAKKMVHDEMAEIARSKFEWLNPLNIRDGNKRRPEDPLYDKRTLFI 403
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH 379
PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL+E+DA +G KELD +
Sbjct: 404 PPDALRKMSTSQKQYWTTKCKYMDVVLFFKVGKFYELYEVDAEIGQKELDWKMTISGVGK 463
Query: 380 C---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
C G E VEKL +GY+V +EQ E+ Q + R + + R++ V T
Sbjct: 464 CRQVGISESGIDDAVEKLLARGYKVGRIEQMESAVQAKAR-----GPNSRIDRKLVNVST 518
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
T + + DA +L+AL E + + R +G +D A +I +G + DD
Sbjct: 519 PSTAADSNI---GADAVHLLALKEVT---LASNGSRVYGFAFLDYAALKIWVGSLHDDDS 572
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN-DLVPLS--EFWDAETTVL 553
+ L LL ++ P EII ++ LS E+ + + ++ V L PLS +F D+ +
Sbjct: 573 SAALGALLVQVSPREIIYESSGLSRESHKCMTKYASAGSVKMQLTPLSRTDFSDSSQIRM 632
Query: 554 EIKNI-YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
+ + Y + + +S A N A V+ ALGG +
Sbjct: 633 SVHSKGYFKASTDSWLSALDYSMNQDA------------------------VICALGGLI 668
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+L + LD+ L E+LP + + + +D L NLE+F N+ G SSGTL
Sbjct: 669 GHLTRLMLDDAL---KNGEVLPYKVY-----QTCLRMDGQTLVNLEIFSNNFDGGSSGTL 720
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR---GVNQPFALEFRKALSR 729
Y LNHC+TA GKRLLR W+ PL + I R D V G GV LE+ L +
Sbjct: 721 YKHLNHCITASGKRLLRRWICHPLKDVDAINSRLDIVEGFIQNCGVGS-ITLEY---LRK 776
Query: 730 LPDMERLLARL 740
+PD+ERLL R+
Sbjct: 777 IPDLERLLGRV 787
>gi|4775578|emb|CAB42555.1| MUS2 protein [Zea mays]
Length = 1184
Score = 229 bits (583), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 166/488 (34%), Positives = 245/488 (50%), Gaps = 65/488 (13%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RDA +RRP D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL+E+
Sbjct: 338 RDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYELYEL 397
Query: 360 DAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA +G KELD + C G E V+KL +GY+V +EQ E+ Q + R
Sbjct: 398 DAEIGQKELDWKMTVSGVGKCRQVGISESGIDDAVDKLIARGYKVGRIEQMESANQAKAR 457
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
V++R++ V T T + + DA +L+AL E + S + FG
Sbjct: 458 -----GVHSVIERKLVHVSTPSTAVD----NIGTDAVHLLALKEVT---LASSGFQVFGF 505
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV 536
+D A +I +G V DD + L LL ++ P E+I + +S ET+R I ++ V
Sbjct: 506 AFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGISKETQRTIRKYASAGSV 565
Query: 537 N-DLVPLS--EFWDAETT--VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
L PLS +F DA ++ K +N T L+ D +
Sbjct: 566 KMQLTPLSGIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTM----------------- 608
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
+ V+ ALGG + +L + L + L E+LP + K + +D
Sbjct: 609 --------NQDVVICALGGLIGHLTRLMLHDAL---KNGEVLPYHVY-----KTCLRMDG 652
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L NLE+F N+ +G SSGTLY LNHCVTA GKR+LR W+ PL + I +R D V G
Sbjct: 653 QTLVNLEIFINNFNGGSSGTLYKHLNHCVTASGKRMLRRWICHPLKDIDAINKRLDVVEG 712
Query: 712 LR---GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNS--NKVVLYEDAAKKQLQ 766
G+ P L + L ++PD+ERLL ++ ++ G +S + E KK+++
Sbjct: 713 FIQNCGLG-PTTLGY---LQKIPDLERLLGQVRSTV---GLSSLLQLPFIGEKIIKKRIK 765
Query: 767 EFISALHG 774
FI ++G
Sbjct: 766 TFIMLING 773
>gi|356529614|ref|XP_003533384.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
Length = 1116
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 257/523 (49%), Gaps = 65/523 (12%)
Query: 235 SSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHF 294
+S +K+S+ DG+ + + S K D+ + D++++ A A KF +
Sbjct: 202 ASHLKRSREDGSKFGS-----------LLNSGKRVRFLDDSLELDMTKK-EAEVASKFEW 249
Query: 295 LGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKF 353
L P R RDA RR D YD TLY+PP+ L +S QKQ+W K K+MD ++FFK+GKF
Sbjct: 250 LNPSRIRDANGRRSNDPLYDRTTLYIPPEALGKMSASQKQYWSVKCKYMDVLLFFKVGKF 309
Query: 354 YELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETP 410
YEL+EMDA +G KELD + C G E V+KL GY+V VEQ ET
Sbjct: 310 YELYEMDADIGHKELDWKITLSGVGKCRQVGISESGIDDAVQKLVACGYKVGRVEQLETS 369
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
E+ + R + V++R++ VVT T +G + PDA +L+++ E N + +
Sbjct: 370 EEAKAR-----GANSVIRRKLVQVVTPSTNVDGNI---GPDAVHLLSIKEENNGLDNGAV 421
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+G VD A R +G + DD CS L LL ++ P E+I LS E ++A+ +
Sbjct: 422 --VYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVSPTEVIYDNRGLSKEAQKALRKF 479
Query: 531 TRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ N P+ D + EI+++ I ++ K S+ L
Sbjct: 480 SLNGSTALQFTPVQSMTDLVSN--EIRDL---IHSKGYFKGSSH------------SLDH 522
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM----AKKP 645
+L +I LSAL G + +L + L++ L GD+ +
Sbjct: 523 VLRSVIHR----EITLSALVGLIDHLDRLMLNDALQN------------GDLYTYQVYRG 566
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
+ +D P + NLE+F N+ G SG+LY L+ CVT+ GKRLLR W+ PL ++ +I R
Sbjct: 567 CLKMDGPTMINLELFVNNEDGGKSGSLYNCLDKCVTSSGKRLLRNWICCPLVDAEIINNR 626
Query: 706 QDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
D V L N + L RLPD+E LL R+ +S + +G
Sbjct: 627 LDIVDDLMA-NPEIVSHIAQHLRRLPDLEHLLGRIKSSLQLSG 668
>gi|4775580|emb|CAB42556.1| MUS2 protein [Zea mays]
Length = 877
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/486 (33%), Positives = 242/486 (49%), Gaps = 61/486 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RDA +RRP D YD TL++PPD LR +S QKQ+W K K+MD V+FFK+GKFYEL+E+
Sbjct: 31 RDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKVGKFYELYEL 90
Query: 360 DAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA +G KELD + C G E V+KL +GY+V +EQ E+ Q + R
Sbjct: 91 DAEIGQKELDWKMTVSGVGKCRQVGISESGIDDAVDKLIARGYKVGRIEQMESANQAKAR 150
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
V++R++ V T T + + DA +L+AL E + S + FG
Sbjct: 151 -----GVHSVIERKLVHVSTPSTAVD----NIGTDAVHLLALKEVT---LASSGFQVFGF 198
Query: 477 CVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV 536
+D A +I +G V DD + L LL ++ P E+I + +S ET+R I ++ V
Sbjct: 199 AFLDYAALKIWVGSVQDDDSSAALGALLMQVSPRELIYETSGISKETQRTIRKYASAGSV 258
Query: 537 N-DLVPLS--EFWDAETT--VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
L PLS +F DA ++ K +N T L+ D +
Sbjct: 259 KMQLTPLSGIDFSDAAQIRNLIHSKGFFNASTESWLSALDCTM----------------- 301
Query: 592 SELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDA 651
+ V+ ALGG + +L + L + L E+LP + K + +D
Sbjct: 302 --------NQDVVICALGGLIGHLTRLMLHDAL---KNGEVLPYHVY-----KTCLRMDG 345
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
L NLE+F N+ +G SSGTLY LNHCVTA GKR+LR W+ PL + I +R D V G
Sbjct: 346 QTLVNLEIFINNFNGGSSGTLYKHLNHCVTASGKRMLRRWICHPLKDIDAINKRLDVVEG 405
Query: 712 LR---GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
G+ P L + L ++PD+ERLL ++ S+ + E KK+++ F
Sbjct: 406 FIQNCGLG-PTTLGY---LQKIPDLERLLGQV-RSTVGLSSLLQLPFIGEKIIKKRIKTF 460
Query: 769 ISALHG 774
I ++G
Sbjct: 461 IMLING 466
>gi|336109948|gb|AEI16742.1| mutS protein 6 [Aspidoscelis tigris]
Length = 358
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 148/372 (39%), Positives = 202/372 (54%), Gaps = 35/372 (9%)
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +
Sbjct: 1 DPSTLFVPEDYLQNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLVF 60
Query: 373 MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKR 429
MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+R
Sbjct: 61 MKGTWAHAGFPEMAFDRFSSILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKFDRVVRR 120
Query: 430 EICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
EIC +++KGT T L + + YL ++ E A R +G+C VD +
Sbjct: 121 EICRIISKGTQTYSILDCDHLENQNKYLFSVKEKVDDSA--GLXRTYGVCFVDTTVGKFH 178
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSEFW 546
LGQ DD CS LL+ PV+II LS ETE+ IL+ +V + L+P S+FW
Sbjct: 179 LGQFPDDRHCSRFRTLLAHYTPVQIIFERGNLSAETEK-ILKGLLPSVVQEALIPGSQFW 237
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T+LE ++ S + + AEGD L PG SEL
Sbjct: 238 NATKTLKTLLEGGYFKDKEDESKPPVLPSXIKSLTAEGDSLGLTPGENSEL--------- 288
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFE-LLPC-----------SGFGDMAKKPYMVLDA 651
VLSALGG FYLKK +D+ LL AKFE +P S F +++ MVLD
Sbjct: 289 VLSALGGCAFYLKKCIIDQELLSMAKFEAYVPVDVDIAKGVKSSSLFAKTSQR--MVLDG 346
Query: 652 PALENLEVFENS 663
L NL++ +NS
Sbjct: 347 VTLANLDILQNS 358
>gi|336109974|gb|AEI16755.1| mutS protein 6 [Pholidobolus macbrydei]
Length = 361
Score = 226 bits (577), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 207/379 (54%), Gaps = 47/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD T+++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDSSTVFVPEDYLQNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVSKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEMAFDRFSSILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
REIC +++KGT T L + + YL + E + S R +G+C VD +
Sbjct: 123 REICRIISKGTQTYSILDCDHLENQNKYLFCIKE--KVDDSSGLQRSYGVCFVDTTVGQF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LVPLSEF 545
LGQ +DD CS L LL+ PV+I+ S ET++ IL+ +V + L+P S+F
Sbjct: 181 YLGQFLDDRHCSRLRTLLAHYTPVQILFERGNPSAETQK-ILKGLLPSVVQEGLIPGSQF 239
Query: 546 WDAETTVLE-IKNIYNRITAESLNKADSNVANS--------QAEGDGLTCLPGILSELIS 596
W+A T+ I+ Y + +K D N A + AEGD L PG +EL
Sbjct: 240 WNATKTLKTLIEQGYFK------DKEDENNAXALPPVIKSLTAEGDSLGLTPGENNEL-- 291
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPC-----------SGFGDMAKK 644
VLSALGG +FYLKK +D+ LL AKFE P S FG +++
Sbjct: 292 -------VLSALGGCVFYLKKCIIDQELLSMAKFEKYTPVDVDIAKGVKSDSLFGKTSQR 344
Query: 645 PYMVLDAPALENLEVFENS 663
MVLD L NLE+ +NS
Sbjct: 345 --MVLDGVTLANLEILQNS 361
>gi|402588187|gb|EJW82121.1| MutS domain III family protein, partial [Wuchereria bancrofti]
Length = 764
Score = 226 bits (575), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 182/647 (28%), Positives = 297/647 (45%), Gaps = 86/647 (13%)
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREI 431
+++G HCGFPE + ++L +GY+V VEQTETP QLE R K + DKVVKRE+
Sbjct: 2 FLQGSFAHCGFPEVAYGRFADQLVNRGYKVARVEQTETPTQLENRNKNERVNDKVVKREV 61
Query: 432 CAVVTKGTLTEGELLSANPD----------ASYLMALTESNQSPASQSTDRCFGICVVDV 481
C + T GT T G +L N D A YL A+ E +G+C +D
Sbjct: 62 CNITTSGTRTYG-VLDGNDDENIIDVMDTTARYLYAIAERGTENVE------YGVCFIDT 114
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVND-LV 540
R +G + D + S L L S +P +I+ +S T + T N + + LV
Sbjct: 115 TVGRFYIGCLSDRSNRSALRTLFSHYQPAQILYERGRVSAST-LTVYNTTVNAVPKEALV 173
Query: 541 PLSEFWDAETTVLEIKN------IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
P EF +E T+ + + +Y++ LN D + S +
Sbjct: 174 PKKEFLTSENTLKLLSSDKYFGELYDKWPVVLLNMIDRD------------------SLV 215
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL-PCSGFGDM-------AKKPY 646
+ + +SALG ++YL++ F+D ++ +FEL P + G + A + Y
Sbjct: 216 LKCNPTYDACVSALGAVIWYLRRCFIDVDMISMRRFELYKPLNLAGVLQDKDEEEAGEKY 275
Query: 647 -----MVLDAPALENLEV---------FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
++LD+ AL++L + F + LY +N C T GKRLLR W+
Sbjct: 276 WSGRRLILDSLALKHLNIIPPISSMKKFALCDPITAKYALYNVINKCATPAGKRLLRQWI 335
Query: 693 ARPLYNSGLIRERQDAVAGLRGVN-QPFALEFRKALSRLPDMERLLARLFA---SSEANG 748
P+ + ++ RQDA+ L N + F + + L ++PD+ERL+ ++ A
Sbjct: 336 CAPVCDPEILCSRQDAIEWLSKANLKRFIDKAMELLRKVPDLERLIQKIHTLGLKYRAEE 395
Query: 749 RNSNKVVLYEDAA--KKQLQEFISALHG--------CELMDQACSSLGAILENTESRQLH 798
++ ++E K+++++ I AL G E M+ S + T L
Sbjct: 396 HPDSRAQMFETMRYNKRKIRDLIRALEGFEHIQNLRIEFMEHFGKS-----QKTVPSLLE 450
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTK 858
G P I L+HFK AF+ +A G I+P G+ +YD A VKE L
Sbjct: 451 RCF--GYRFPDISEDLQHFKSAFNRDKALEDGIIVPEKGIIKEYDDAISNVKECIHELDL 508
Query: 859 HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+L RK L ++I + G+ Y LE+PE + ++ ++ L+SS+KG+ R T ++ L
Sbjct: 509 YLNVIRKQLHCSNINFFGSGRSRYQLEIPEEIAMNLSHEFGLKSSRKGYKRMVTNDLVNL 568
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ L +AE + + I++R+ F + KW V A ++L
Sbjct: 569 VKNLDEAEDQLDILRHDIMRRMFADFGDRSTKWTMAVERMATFDVLL 615
>gi|6224917|gb|AAF06013.1|AF193018_1 MutS homolog 7 [Arabidopsis thaliana]
Length = 1109
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 170/524 (32%), Positives = 254/524 (48%), Gaps = 64/524 (12%)
Query: 260 VKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLY 318
V + S+K +PV G+ E E KF +L R RDA RRRP D YD +TL+
Sbjct: 202 VPVLDSNKRLKMLQDPVCGEKKE---VNEGTKFEWLESSRIRDANRRRPDDPLYDRKTLH 258
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQP 378
+PPD + +S QKQ+W KS++MD V+FFK+GKFYEL+E+DA +G KELD +
Sbjct: 259 IPPDVFKKMSASQKQYWSVKSEYMDIVLFFKVGKFYELYELDAELGHKELDWKMTMSGVG 318
Query: 379 HC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVV 435
C G E V+KL +GY+V +EQ ET +Q + R + ++ R++ V+
Sbjct: 319 KCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQAKAR-----GANTIIPRKLVQVL 373
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
T T +EG + PDA +L+A+ E ST +G VD A R +G + DD
Sbjct: 374 TPSTASEGNI---GPDAVHLLAIKEIKMELQKCST--VYGFAFVDCAALRFWVGSISDDA 428
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-RNPLVNDLVPLSEFWDAETTVLE 554
C+ L LL ++ P E++ + LS E ++A+ ++T L P+ + +T
Sbjct: 429 SCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYTLTGSTAVQLAPVPQVM-GDTDAAG 487
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
++NI I + K S N +G L+E LSALG + +
Sbjct: 488 VRNI---IESNGYFKGSSESWNCAVDG---------LNEC-------DVALSALGELINH 528
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV------LDAPALENLEVFENSRSGDS 668
L + L++ L GD+ PY V +D + NLE+F NS G
Sbjct: 529 LSRLKLEDVL------------KHGDIF--PYQVYRGCLRIDGQTMVNLEIFNNSCDGVL 574
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
G L L +CV+ GKRLLR W+ PL + I +R D V ++ + + L
Sbjct: 575 QGPLNKYLENCVSPTGKRLLRNWICHPLKDVESINKRLDVVEEFTANSESMQIT-GQYLH 633
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+LPD+ERLL R+ +S S+ VL KK L++ + A
Sbjct: 634 KLPDLERLLGRIKSSVR-----SSASVLPALLGKKVLKQRVKAF 672
>gi|336109964|gb|AEI16750.1| mutS protein 6 [Phelsuma lineata]
Length = 360
Score = 224 bits (572), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 137/379 (36%), Positives = 195/379 (51%), Gaps = 47/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG KEL L
Sbjct: 2 YDPGTLFVPEDYLKNCTPGMRKWWEMKSRNFDTVIFYKVGKFYELYHMDAVVGVKELGLV 61
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K D+VV+
Sbjct: 62 FMKGTWAHSGFPEIAFDRFASVLVQKGYKVVRVEQMETPEMMEARCKSLVHPTKFDRVVR 121
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
REIC ++TKGT T +G++ + YL+ + E ++ S R +G+C VD
Sbjct: 122 REICRIITKGTQTYSILDGDI--SEDHNKYLLCVKE--KAVDSAGLHRIYGVCFVDTTVG 177
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ +DD CS LL+ PV+I+ S ET+R + + L P S+
Sbjct: 178 KFYLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQRIFKGLLSSTVQESLAPGSQ 237
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS---- 600
FW A T+ + + Q + G LP ++ + + DS
Sbjct: 238 FWSAAKTLKTL--------------IEEGYFEGQEBASGRLVLPSVIRSMTAESDSLGLT 283
Query: 601 ----GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKK 644
L ALG +FYLKK +D+ LL A F E +P S F +++
Sbjct: 284 PAEDCELALCALGSCVFYLKKCIIDQELLSMANFEEYIPVDVHATKTDESSSIFAKXSQR 343
Query: 645 PYMVLDAPALENLEVFENS 663
MVLD L NLE+ +N+
Sbjct: 344 --MVLDGVTLTNLEILQNA 360
>gi|336109978|gb|AEI16757.1| mutS protein 6 [Saltuarius cornutus]
Length = 360
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 198/375 (52%), Gaps = 40/375 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + + WWE KS++ + VIFFK+GKFYEL+ MDA VG KEL L
Sbjct: 3 YDPGTLFVPEDYLKNCTPAMRXWWEMKSQNFNCVIFFKVGKFYELYHMDAVVGVKELGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGIWAHSGFPEVAFDKFSXVLVQKGYKVVRVEQMETPEMMEARCKSLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
REIC ++TKGT T L S + YL+ + E + A R +G+C VD A +
Sbjct: 123 REICRIITKGTQTFSILDSDFSEDQNKYLLCVKEKVEDSA--GLHRVYGVCFVDTAVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD CS LL+ PV+I+ S ET++ I + + + L P S+FW
Sbjct: 181 YVGQFLDDRHCSRFRTLLAHYAPVQILFEKGNPSAETQK-IFKGLLSSVQEGLAPGSQFW 239
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + E + A +A + AE D L PG SEL
Sbjct: 240 NAAKT---LKTLIEEGYFEGHSSAQGRLALPPVIRSMTAESDSLGFTPGENSEL------ 290
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMV 648
L ALG +FYLKK +D+ LL A F E +P S F +++ MV
Sbjct: 291 ---ALCALGSCVFYLKKCIIDQELLSMANFEEYVPVDVHITKTAASSSIFAKTSQR--MV 345
Query: 649 LDAPALENLEVFENS 663
LD L NLE+ +N+
Sbjct: 346 LDGVTLANLEILQNA 360
>gi|115662656|ref|XP_783076.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/349 (38%), Positives = 194/349 (55%), Gaps = 24/349 (6%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D K R D YD TL++P F+ + +QWWE KSK+ + V+FFKMGKFYEL+ M
Sbjct: 204 KDIKGRTEQDPEYDSSTLFVPKSFMDKTTPAMRQWWEMKSKYYNAVLFFKMGKFYELYHM 263
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
DA V KEL L +MKGE H GFPE FS E L +KGYR+ VEQTETP+ ++ R K
Sbjct: 264 DAEVAVKELGLIFMKGENAHSGFPEIAFSRYSETLIQKGYRIARVEQTETPDMMQERVKH 323
Query: 420 KGSK----DKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTD 471
DKVVKREIC + T+ T T +G+ A +SYL+A+TE S +
Sbjct: 324 LSRAVTKFDKVVKREICRISTQATRTFSFIDGDTCEAQ--SSYLLAVTE-RPCEGSSGGE 380
Query: 472 RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT 531
+G+C+V+ + + +GQ DD S L++ P +++ L P+T++ + +
Sbjct: 381 SVYGVCIVETSIGKFYIGQFQDDRHSSRFRTLIAHYPPAQVLFERGKLLPKTQQLLSNNL 440
Query: 532 RNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL 591
+ L + L+P SEFWDA T +K + + E + D + + +G GL+C P L
Sbjct: 441 VSVLKDSLLPGSEFWDASKT---LKALMEKGYFEDSER-DKDGQENGGKG-GLSCWPDEL 495
Query: 592 SELISTGDS-------GSQV-LSALGGTLFYLKKSFLDETLLRFAKFEL 632
E++S DS G ++ LSALG +YLKK L++ LL FE+
Sbjct: 496 KEMLSDADSLGLTPKDGCEMALSALGACTWYLKKCCLEQELLSMRNFEV 544
>gi|357500449|ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
gi|355495528|gb|AES76731.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
Length = 1160
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 231/470 (49%), Gaps = 68/470 (14%)
Query: 289 ADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIF 347
A KF +L P R RDA RRP D YD TLY+PP+ LR ++ QKQ+W K K+MD ++F
Sbjct: 282 ASKFEWLDPSRIRDANGRRPDDPLYDRTTLYIPPEVLRKMTASQKQYWSVKCKYMDVLLF 341
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVV 404
FK+GKFYEL+EMDA +G KELD + C G E V+ L +GY+V V
Sbjct: 342 FKVGKFYELYEMDAEIGHKELDWKITLSGVGKCRQVGISESGIDDAVKNLVARGYKVGRV 401
Query: 405 EQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
EQ ET E+ + R + V++R++ VVT T +G + PDA++L+A+ E +S
Sbjct: 402 EQLETSEEAKAR-----GANSVIQRKLVQVVTPSTNVDGNI---GPDANHLLAIKE--ES 451
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
S + +G VD A R+ +G + DD CS L LL ++ +S E E
Sbjct: 452 NGSDNGSVTYGFAFVDCARLRLWVGSIDDDASCSALGALLMQV--CSKFPSLTGVSKEAE 509
Query: 525 RAILRHTRNPLVN-DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
+A + + N L P+ D T+ I + I ++ K SN
Sbjct: 510 KAFRKFSLNGSTTLQLTPMRSITDLVTS-----EISDLIHSKGYFKGSSN---------- 554
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
L +L+ +I LSALGG + +L + LDE L GD+
Sbjct: 555 --SLDHVLTNVIHC----EITLSALGGLIGHLNRLMLDEVLQN------------GDIY- 595
Query: 644 KPYMV------LDAPALENLEVFENSRSGDSSG-------TLYAQLNHCVTAFGKRLLRT 690
PY V +D P NLE+F NS G +G TLY L++CVT+ GKRLLR
Sbjct: 596 -PYQVYKGCLKMDGPTYINLEIFGNSNDGGKAGKCLFYLSTLYKYLDNCVTSSGKRLLRN 654
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
W+ PL ++ I R D V L + P + + L +LPD+E LL R
Sbjct: 655 WICCPLKDAEGINNRLDVVDHL--IASPVIVSHIAQHLRKLPDLELLLGR 702
>gi|336109986|gb|AEI16761.1| mutS protein 6 [Trogonophis wiegmanni]
Length = 361
Score = 223 bits (568), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 197/373 (52%), Gaps = 37/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LR+ + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L
Sbjct: 3 YDPTTLFVPEDYLRDCTPGMRKWWEIKSQYFDSVIFYKVGKFYELYHMDAVIGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQTETPE +E R + D+VV+
Sbjct: 63 FMKGTWAHAGFPEIAFDRFTTVLVQKGHKVVRVEQTETPEMMEARCRALAHPTKYDRVVR 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
RE+C +++KGT T +GE L YL+ + E + S R +G+C VD
Sbjct: 123 REVCRIISKGTQTYSILDGEQLETQ--NKYLLCVKE--KVDDSTGLHRTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ MDD CS LL+ PV+I+ S ET++ + + L+ ++
Sbjct: 179 KFYLGQFMDDRHCSRFRTLLAHYSPVQILFERGNPSSETQKIFKSLLPSTVQEGLIAGAQ 238
Query: 545 FWDAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
FW A T++E ++ A S + + AE D L PG SEL
Sbjct: 239 FWKASRTLKTIIEEGYFQDKENAVSGLSLPPVIKSMTAESDSLGLTPGENSEL------- 291
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP-----------YMVL 649
LSALG +FYLKK +D+ LL KF E +P D+AK+ MVL
Sbjct: 292 --ALSALGSCVFYLKKCIIDQELLSVGKFEEYIPVD--VDIAKETKSSSVFSKTSQRMVL 347
Query: 650 DAPALENLEVFEN 662
D L NLE+ +N
Sbjct: 348 DGVTLANLEILQN 360
>gi|336109950|gb|AEI16743.1| mutS protein 6 [Boa constrictor]
Length = 361
Score = 223 bits (567), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 195/370 (52%), Gaps = 29/370 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTRFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C ++++GT T L + YL+ + E + A R +G+C VD +
Sbjct: 123 REVCRIISRGTQTYSILDGDYSETHNKYLLCIKEKIEDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD CS LL+ PV+II S ET++ + + L P S+FW
Sbjct: 181 YVGQFLDDRHCSRFRTLLAHYTPVQIISERGNPSAETQKILKGLISFTVQESLTPGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T++E N+ S + + AE D L P SEL
Sbjct: 241 NASKTLKTLIEEGYFQNKENTNSGVTLPPVIRSMTAESDSLGLTPAENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPA 653
VLSALGG +FYLKK +D+ LL A F E +P G + + + MVLD
Sbjct: 292 VLSALGGCVFYLKKCIIDKELLSMANFEEYIPVDIDIVNGTKSSRVFDKTNQRMVLDGVT 351
Query: 654 LENLEVFENS 663
L NLE+ +N+
Sbjct: 352 LANLEILQNA 361
>gi|336110078|gb|AEI16807.1| mutS protein 6 [Uranoscodon superciliosus]
Length = 361
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 199/374 (53%), Gaps = 37/374 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L
Sbjct: 3 YDSTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVIGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNMLVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
RE+C +++KGT T +G+ + + YL+ + E + S S R +G+C VD
Sbjct: 123 REVCRIISKGTQTYSILDGDF--SETHSKYLLCMKE--KCDDSASLHRTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ +DD S LL+ PV+I+ LSPET++ + + + L S+
Sbjct: 179 KFYLGQFVDDRHSSRFRTLLAHYTPVQILFERGNLSPETQKILKSLLPSTVQESLTSGSQ 238
Query: 545 FWDAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
FW+A T++E ++ A + + + AE D L PG SEL
Sbjct: 239 FWNASKTLKTLMEDDYFQDKENANVGVVLPAVIKSMTAESDSLGLTPGENSEL------- 291
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVL 649
LSALG +FYLKK +D+ +L AKF E +P S F +K MVL
Sbjct: 292 --ALSALGSCIFYLKKCIIDKEILSMAKFEEYIPVDTDIGKGIKSSSIFAKTNQK--MVL 347
Query: 650 DAPALENLEVFENS 663
D L NLE+ EN+
Sbjct: 348 DGVTLANLEILENA 361
>gi|336109970|gb|AEI16753.1| mutS protein 6 [Typhlops jamaicensis]
Length = 361
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 199/372 (53%), Gaps = 33/372 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLKNCTPGMRKWWELKSQYFDSVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ E+PE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSSILVQKGHKVVRVEQMESPEMMEARCKSLAHPTRFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T G L + YL+ + E ++ S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYGILDGDYSETHNKYLLCIKE--KTDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + L P S+FW
Sbjct: 181 HLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKGLLSFTVQESLTPGSQFW 240
Query: 547 DAETTVLE-IKNIYNRITAESLNKAD--SNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
A T+ I+ Y + +++N+ + + A+ D L P SEL
Sbjct: 241 SASKTLKTLIEEGYFQNKEDTINRLTLPPVIGSMTAKSDSLGLTPAENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKPY-----------MVLDA 651
VLSALG +FYLKK +D+ LL A F E +P D+ K + MVLD
Sbjct: 292 VLSALGSCVFYLKKCIIDKELLSMANFEEYIPVD--VDIVKGIHSSKVFDNVNQRMVLDG 349
Query: 652 PALENLEVFENS 663
L NLE+ +N+
Sbjct: 350 VTLANLEILQNA 361
>gi|336109944|gb|AEI16740.1| mutS protein 6 [Anilius scytale]
Length = 361
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 195/372 (52%), Gaps = 33/372 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPXTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTRFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C ++++GT T L + YL+ + E A R +G+C VD +
Sbjct: 123 REVCRIISRGTQTYSILDGDYSETHNKYLLCIKEKMDDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD CS L LL+ PV+I+ S ET++ + + + L P S+FW
Sbjct: 181 YVGQFLDDRHCSRLRTLLAHYTPVQILFERGNPSAETQKILKDLISSTVQESLTPGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T+++ N+ S + + AE D L P SEL
Sbjct: 241 NASKTLKTLIDESYFQNKENTNSGTTLPPVIRSMTAESDSLGLTPAENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDA 651
VLSALG +FYLKK +D+ LL A F E +P S F ++ MVLD
Sbjct: 292 VLSALGSCVFYLKKCIIDKELLSMANFEEYIPVDVDIVNGTKSSSVFHKTNQR--MVLDG 349
Query: 652 PALENLEVFENS 663
L NLE+ +N+
Sbjct: 350 VTLANLEILQNA 361
>gi|336109996|gb|AEI16766.1| mutS protein 6 [Calotes emma]
Length = 361
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/382 (36%), Positives = 198/382 (51%), Gaps = 53/382 (13%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L
Sbjct: 3 YDPGTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVIGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGIWAHSGFPEIAFDRFCNTLVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C V++KGT T L A+ YL+++ E A ST C +G+C +D
Sbjct: 123 RKVCRVISKGTQTYSILDGDFADTHNRYLLSIKEK----AGDSTGLCRTYGVCFIDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L L++ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLVAHFTPVQILFERGNSSVETQKLLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQ-----------AEGDGLTCLPGILSE 593
FW+A T+ +I +E D N + AE D L PG SE
Sbjct: 239 FWNASKTL--------KILSEDGYFEDKEKDNGKPVLPPVIRSMTAENDSLGLTPGENSE 290
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDM 641
L LSALGG +FYLKK +D+ +L AKFE L P S F
Sbjct: 291 L---------ALSALGGCVFYLKKCIIDKEILSMAKFEEYIPVDVDIGKGLKPRSIFAKT 341
Query: 642 AKKPYMVLDAPALENLEVFENS 663
+++ MVLD L NLE+ +N
Sbjct: 342 SQR--MVLDGVTLANLEILQNG 361
>gi|336109952|gb|AEI16744.1| mutS protein 6 [Coleonyx variegatus]
Length = 361
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/376 (37%), Positives = 195/376 (51%), Gaps = 43/376 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG KEL L
Sbjct: 3 YDPGTLFVPADYLGNCTPGMRKWWEMKSQNFDCVIFYKVGKFYELYHMDAVVGVKELGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSSVLVQKGYKVVRVEQMETPEMMETRCKFLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
R +C ++TKGT T +G+L YL+ + E + S R +G+C VD
Sbjct: 123 RAVCRIITKGTQTYSILDGDL--TEEQNKYLLCVKE--KVADSTGFHRVYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS LL+ PV+I+ S ET++ + + + L P S+
Sbjct: 179 KFFVGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKGLLSSTVQEGLAPGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTG 598
FW+A T +K + ES A + + AE D L PG SEL
Sbjct: 239 FWNAXKT---LKTLIEGDYFESQENASGRLVLPLVIRSMTAESDPLGLTPGENSEL---- 291
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLP-----------CSGFGDMAKKPY 646
L ALG +FYLKK +D+ LL A F E +P S F +++
Sbjct: 292 -----ALCALGSCIFYLKKCIIDQELLSMANFEEYVPVDIHLTKATASVSIFAKTSQR-- 344
Query: 647 MVLDAPALENLEVFEN 662
MVLD L NLE+ +N
Sbjct: 345 MVLDGVTLANLEILQN 360
>gi|414885372|tpg|DAA61386.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
Length = 196
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 147/207 (71%), Gaps = 11/207 (5%)
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
+RPVEIIKP+ MLSPETE+A+ +TR PL+N+LVP +EFWDAE T+ EIK Y+ +A
Sbjct: 1 MRPVEIIKPSKMLSPETEKALNNNTRKPLINELVPSTEFWDAEKTIDEIKQYYS--SANK 58
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
KAD D + CLP +L ELI GD + LSALGG+LFYL+++ LDE +L
Sbjct: 59 QKKADDI-------QDCVDCLPNLLRELIGAGDK-TYALSALGGSLFYLRQTLLDEKILP 110
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
A+FE L CSGF + +K +M+LD ALENLE+ EN+R+G SGTLYAQLNHCVT FGKR
Sbjct: 111 CAEFEPLACSGFINNIRK-HMILDTAALENLELLENTRTGGLSGTLYAQLNHCVTGFGKR 169
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLR 713
LL+ W+A+PLY+ I RQ AVA +
Sbjct: 170 LLKRWIAKPLYDRREILRRQSAVATFK 196
>gi|336110066|gb|AEI16801.1| mutS protein 6 [Pristidactylus torquatus]
Length = 361
Score = 219 bits (558), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 194/373 (52%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQVETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLQRIYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L+ S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHFTPVQILFERGNPSTETQKILKSLLPSAVQEGLMAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + +S V + AE D L PG SE
Sbjct: 241 NASKT---LKTLIEEGYFQDKENTNSGVVLPPVIRSMTAESDSLGLTPGENSEF------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC---------SGFGDMAKKPYMVLD 650
VLSALG +FYL+K +D+ +L AKF E +P SG + MVLD
Sbjct: 292 ---VLSALGSCVFYLRKCMIDKEILSMAKFEEYVPVDTDIGKGIKSGSIFVKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|336109954|gb|AEI16745.1| mutS protein 6 [Cordylosaurus subtesselatus]
Length = 360
Score = 219 bits (557), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 195/368 (52%), Gaps = 28/368 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP T+++P D+L+N + G ++WWE KS++ D VI +K+GKFYEL+ MDA V +L L+
Sbjct: 3 YDPTTIFVPEDYLKNCTPGMRKWWEIKSQYFDSVICYKVGKFYELYHMDAVVAVNKLGLE 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE ++ R K D+VV+
Sbjct: 63 FMKGTWAHAGFPEIAFDKFTNLLIQKGHKVVRVEQVETPEMMDARCKNLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T G L + + +A YL+ + E A +G+C VD
Sbjct: 123 REVCRIISKGTQTYGILDADHLEAHSKYLLCVKEKIDDSA--GLRHTYGVCFVDTTVGTF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS L LL+ PV+I+ S ET++ + + L P S+FW
Sbjct: 181 HLGQFLDDRHCSRLRTLLAHYPPVQILFERGNPSAETQKIFKGLLPSAVQEGLAPGSQFW 240
Query: 547 DAETT--VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
+A T +L ++ + A + + AE D L PG EL V
Sbjct: 241 NASKTLKILNEESYFKDENASGSLXLPPVIKSMTAESDSLGLTPGENREL---------V 291
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFE--------LLPCSGFGDMAKKPY--MVLDAPAL 654
LSALG +FYLKK +D+ LL AKFE ++ SG + K MVLD L
Sbjct: 292 LSALGACVFYLKKCMIDQELLSLAKFEEYVPVDVDVVKGSGSSSIFAKTSQRMVLDGVTL 351
Query: 655 ENLEVFEN 662
NLE+ +N
Sbjct: 352 ANLEILQN 359
>gi|336110062|gb|AEI16799.1| mutS protein 6 [Phymaturus palluma]
Length = 361
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 196/372 (52%), Gaps = 33/372 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRAMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ L E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCLKE--KCDDSTGLHRIYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ + ET++ + + + L+ S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHYPPVQILFERGNPTTETQKILKNLLPSAVQEGLIAGSQFW 240
Query: 547 DAETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T ++E ++ A S + + AE D L PG SEL
Sbjct: 241 NASKTLKALIEEGYFKDKENANSGVVLPPVIESMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDA 651
LSALG +FYLKK +D +L AKF E +P S F + ++ MVLD
Sbjct: 292 ALSALGCCIFYLKKCIIDREILSMAKFEEFVPVDTDIGKGIKSSSIFANTNQR--MVLDG 349
Query: 652 PALENLEVFENS 663
L NLE+FEN+
Sbjct: 350 VTLANLEIFENA 361
>gi|336110052|gb|AEI16794.1| mutS protein 6 [Liolaemus bellii]
Length = 361
Score = 218 bits (554), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 197/377 (52%), Gaps = 43/377 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLA 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ +EQTETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRIEQTETPEMMEARCRAMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ L E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCLKE--KCDDSAGLHRIYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + ++ L+ S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHYPPVQILFERGNPSTETQKIMKSLLPSAVLEGLLAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSN----------VANSQAEGDGLTCLPGILSELIS 596
+A T+ + ES K N + + A+ D L PG SEL
Sbjct: 241 EASKTL-------KTLIEESYFKDKENPNSGVVLPPVIESMTADSDSLGLTPGENSEL-- 291
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------ 646
LSALG +FYLKK +D+ +L AKF E +P G G + +
Sbjct: 292 -------ALSALGCCVFYLKKCIIDKEILSMAKFEEFVPVDTNIGKGIKSSNIFANTNQR 344
Query: 647 MVLDAPALENLEVFENS 663
MVLD L NLE+FEN+
Sbjct: 345 MVLDNVTLANLEIFENA 361
>gi|336110002|gb|AEI16769.1| mutS protein 6 [Chlamydosaurus kingii]
Length = 361
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/375 (37%), Positives = 198/375 (52%), Gaps = 41/375 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+++ E S S C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLSIKEK----VSDSAGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ LS ET++ + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNLSVETQKVFKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELIST 597
FW+A T+ + I++ Y E +S +A + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGY----FEDKENGNSRLALPPVIRSMTAENDSLGLTPGENSEL--- 291
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------M 647
LSALGG ++YLKK +D +L AKF E +P G G + + M
Sbjct: 292 ------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHNIFAKTSQRM 345
Query: 648 VLDAPALENLEVFEN 662
VLD L NLE+F+N
Sbjct: 346 VLDGVTLANLEIFQN 360
>gi|336109992|gb|AEI16764.1| mutS protein 6 [Acanthosaura lepidogaster]
Length = 361
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 198/377 (52%), Gaps = 45/377 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDSVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGAWAHSGFPEIAFDRFSNTLVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+++ E A ST C +G+C +D
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLSIKEK----AGDSTGLCHTYGVCFIDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L LL+ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLLAHYTPVQILFERGNPSVETQKLLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSN-------VANSQAEGDGLTCLPGILSELIST 597
FW+A T+ I N + DSN + + AE D L PG SEL
Sbjct: 239 FWNASKTL----KILNEDGYFEDKENDSNKPVLPPVIKSMTAENDSLGLTPGENSEL--- 291
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKP 645
LSALGG + YLKK +D+ +L +KF E +P S F ++++
Sbjct: 292 ------ALSALGGCVSYLKKCIIDKEILSLSKFEEYIPVDVDIGKGIKSQSIFAKISQR- 344
Query: 646 YMVLDAPALENLEVFEN 662
MVLD L NLE+ +N
Sbjct: 345 -MVLDGVTLANLEILQN 360
>gi|336109966|gb|AEI16751.1| mutS protein 6 [Heloderma suspectum]
Length = 361
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/371 (36%), Positives = 193/371 (52%), Gaps = 33/371 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLVHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E A R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDYSETHNRYLLCMKEKVDDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKGLLSSTVQEGLSAGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T++E + A S + + AE D L P G++G
Sbjct: 241 NASKTLKTLIEESYFQGKENASSRLILPPVIRSMTAESDSLGLTP---------GENGEL 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAK-----------KPYMVLDA 651
LSALG +FYLKK +D+ LL AKF E +P D+AK +VLD
Sbjct: 292 SLSALGSCVFYLKKCIIDQELLSMAKFEEYIPVD--ADIAKGMKSSSIFAKTSQRVVLDG 349
Query: 652 PALENLEVFEN 662
L NLE+ +N
Sbjct: 350 VTLSNLEILQN 360
>gi|336110060|gb|AEI16798.1| mutS protein 6 [Phrynosoma platyrhinos]
Length = 360
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 192/369 (52%), Gaps = 28/369 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGYKVVRVEQMETPEMMEARCKSMSHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFQDDRHSSRFRTLLAHYTPVQILFERGNPSTETQKIMKTLLPSTVQEGLTAGSQFW 240
Query: 547 DAETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T ++E N+ + S + + AE D L PG SEL
Sbjct: 241 NASKTLKALIEEGYFQNKENSNSGVVLPPLIQSMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-SGFGDMAKKPY-------MVLDAPAL 654
LSALG +FYLKK +D+ +L AKF E +P + G K MVLD L
Sbjct: 292 ALSALGCCVFYLKKCIIDKEILSMAKFEEYVPVDTDIGKGTKSTIFTKTNQRMVLDGVTL 351
Query: 655 ENLEVFENS 663
NLE+ EN+
Sbjct: 352 ANLEILENA 360
>gi|336110074|gb|AEI16805.1| mutS protein 6 [Plica plica]
Length = 361
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 201/380 (52%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L
Sbjct: 3 YDSTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVIGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H FPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSSFPEIAFDRFSNMLVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
RE+C +++KGT T +G+ + + YL+++ E + S R +G+C VD
Sbjct: 123 REVCRIISKGTQTYSILDGDF--SETHSKYLLSIKE--KCDDSAGLHRTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ LGQ +DD S LL+ PV+I+ LS ET++ + + + L P S+
Sbjct: 179 KFYLGQFVDDRHSSRFRTLLAHYTPVQILFERGNLSTETQKILKSLLPSTVQESLAPGSQ 238
Query: 545 FWDAETTVLEI-KNIYNRITAESLNKADSNVA--------NSQAEGDGLTCLPGILSELI 595
FW+A T+ + + Y R +K ++NV + AE D L PG SEL
Sbjct: 239 FWNASKTLKTLMEEDYFR------DKENANVGVVLPPVIRSMTAESDSLGLTPGEDSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALG +FYLKK +D+ +L AKF E +P S F +
Sbjct: 292 --------SLSALGSCVFYLKKCIIDKEILSMAKFEEYIPVDTDIGKGIKSSSIFAKTNQ 343
Query: 644 KPYMVLDAPALENLEVFENS 663
K MVLD L NLE+ EN+
Sbjct: 344 K--MVLDGVTLANLEILENA 361
>gi|399216563|emb|CCF73250.1| unnamed protein product [Babesia microti strain RI]
Length = 1197
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 192/681 (28%), Positives = 304/681 (44%), Gaps = 71/681 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSE--------GQKQWWEFKSKHMDKVIFFKMG 351
+D+ RRP Y+P T+ +PP + ++E KQ+W K+ H DK++ FKMG
Sbjct: 285 KDSSGRRPDCTSYNPSTMLIPPPTHKWINEYRNVHYTPTMKQYWSIKATHFDKLVLFKMG 344
Query: 352 KFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + K DL++M K +PH GFPE++ K+ GY+V+VVEQ ETP
Sbjct: 345 RFYEIFYIDACIAHKLCDLRWMGKESKPHIGFPEQSLQFYASKMVASGYKVVVVEQMETP 404
Query: 411 EQLELRRKEKGSK--DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQ 468
+ E+ K+KG K +KV+ R++C +++KGTL +L + +A S
Sbjct: 405 K--EMLEKKKGMKWSEKVISRDVCQILSKGTLLHSAMLPSESQPLLSIAFKSSKPMFLGD 462
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK-PANMLSPETERAI 527
FG+C+VDV+T+ I L MDD L L+ P EI+ P+N+ +
Sbjct: 463 QEYCNFGLCLVDVSTNSINLSFCMDDESRLNLRTTLAHANPAEILYIPSNV----NRNVV 518
Query: 528 LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCL 587
R PL L L E + +T +++ I + +LN +S+ +E D L
Sbjct: 519 EIFKRLPLKPQL-SLYEITEDDT---DMEGIIEDNISSALNSINSD-GTGISEADKSLIL 573
Query: 588 PGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYM 647
I+ L S + Q LG + Y S D+ K
Sbjct: 574 RSII--LASKYLADMQ----LGNVIKYSNVSMPDQYATNRLK------------------ 609
Query: 648 VLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQD 707
L+ ++LE+F + G+ + + ++ TAFG RLLR W++ P + +I R D
Sbjct: 610 -LNTCVYDHLEMFTTTL-GEKKNSFFQFIDKTSTAFGSRLLRRWVSSPSTDLAVINSRLD 667
Query: 708 AVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQE 767
+V L N E R L D+ER + + +N + + + ++ +L
Sbjct: 668 SVEWLME-NPQINNEIRTLLCSCIDVERQMGAI-----SNNNTTKRAIQFDHVQSNRLLS 721
Query: 768 FISALHGCELMDQACSSLGAILENTESRQLHHILT---PGKGLPAIVSILKHFKDAFDWV 824
F L G E + SL ++ + S L ++T G P + + HF D V
Sbjct: 722 FHKLLKGFEPFE----SLRCLINDKNSNYLATLVTLENEGGAYPDLKPYIAHFMDKLKIV 777
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
+ + P G D +++ I L L L T + +V K Y +
Sbjct: 778 DK----QCYPQRGFHEKSDKVFERIDLIIQQLHNELCNLSNSLK-TELKFVH-SKFKYEV 831
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E PE+L + YE+ SS+KGF R+ TP I EL E E+ L + LI +F
Sbjct: 832 ECPEALHKKLSTKYEITSSRKGFIRFRTPRILAFTNELEDMEFERWECLNDYFKLLIEEF 891
Query: 945 CE---HHNKWRQMVAATAGLT 962
H +K Q+VA L+
Sbjct: 892 TTFAPHFSKAIQIVAEIDCLS 912
>gi|336110010|gb|AEI16773.1| mutS protein 6 [Hydrosaurus sp. TMT-2011]
Length = 361
Score = 216 bits (550), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 197/374 (52%), Gaps = 37/374 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E ST C +G C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCIKEK----VGDSTGLCHTYGACFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L LL+ PV+++ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLLAHYTPVQVLFERGNPSVETQKVLKGLLLSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIY--NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
FW+A T+ + I++ Y ++ A + + AE D L PG SEL
Sbjct: 239 FWNASKTLKILIEDGYFKDKENASGRLALPPVIRSMTAENDSLGLTPGENSEL------- 291
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVL 649
LSALGG ++YLKK +D+ ++ AKF E +P S F ++K MVL
Sbjct: 292 --ALSALGGCVYYLKKCIIDKEIISMAKFEEYIPVDVDIGKGIKSHSIFAKTSQK--MVL 347
Query: 650 DAPALENLEVFENS 663
D L NLE+ +N
Sbjct: 348 DGVTLANLEILQNG 361
>gi|380473607|emb|CCF46204.1| DNA mismatch repair protein msh6 [Colletotrichum higginsianum]
Length = 555
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 168/593 (28%), Positives = 288/593 (48%), Gaps = 79/593 (13%)
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK-----DKVVKREICAVV 435
G PE + M V + KGY+V V+Q E+ E+R ++ + DK+++RE+ ++
Sbjct: 5 GVPESSLDMWVNQFVAKGYKVARVDQMESALGKEMRERDDTAAKSKKADKIIRRELACIL 64
Query: 436 TKGTLTEGELLSANPDASYLMALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T GTL +G +L + A+Y ++ ES + PA FGI VD AT + + + D
Sbjct: 65 TGGTLVDGSMLQDDL-ATYCASIKESTIDGKPA-------FGITFVDCATGQFFISEFED 116
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV--NDLVPLSEFWDAETT 551
D+D + +++ P E+I + +S + R IL++ +P+ N L SEFWDA+ +
Sbjct: 117 DVDLTKFETFVAQTSPRELILEKSRISIKALR-ILKNNTSPMTIWNYLKSGSEFWDADMS 175
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E+ T+ K D G P L++ + +++ALG
Sbjct: 176 RRELD------TSGYFVKDDG----------GAEAWPHALAQ----ARDKNLLMAALGAL 215
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YL+ L+ LL FE + + + +VLD L NLEVF N+ +G GT
Sbjct: 216 VQYLRMLKLETDLLSQGNFEW-----YTPIRRNGTLVLDGQTLINLEVFSNTVNGGPEGT 270
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL---RGVNQPFALEFRKALS 728
L+A LN CVT FGKRL R W+ PL + I ER DAV L RGV + +F ++
Sbjct: 271 LFALLNRCVTPFGKRLFRQWVCHPLCDIMRINERLDAVDMLNTDRGVRE----QFTSQMT 326
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI 788
++PD+ERL++R+ A+S + ++F+ L G E ++ LG+
Sbjct: 327 KMPDLERLISRIHAAS------------------CKPEDFVRVLEGFEQIEYTMGLLGSF 368
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
+ + +L+ +P + L ++K AFD +A + +IP G++ D+D++ +
Sbjct: 369 --GGGNGLVDRLLS---SMPNLNDPLSYWKTAFDRKKAKDEKILIPQRGIEEDFDNSQDR 423
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++EI+ L L ++ L ++ + +GK++Y +E P+S++ VP ++ S+
Sbjct: 424 IEEIKQELQAVLGRKKAELKCKTLKFTDVGKEIYQVEAPKSVK--VPSNWRQMSATSSVK 481
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFC----EHHNKWRQMVAA 957
RY+ + L+ EL +AE +K + R +F H W AA
Sbjct: 482 RYYFEELTDLVRELQEAEETHSQIVKEVAARFFRRFDADYETRHRHWVNQAAA 534
>gi|294892329|ref|XP_002774009.1| DNA mismatch repair protein mutS, putative [Perkinsus marinus ATCC
50983]
gi|239879213|gb|EER05825.1| DNA mismatch repair protein mutS, putative [Perkinsus marinus ATCC
50983]
Length = 943
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 213/707 (30%), Positives = 300/707 (42%), Gaps = 112/707 (15%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQ-----KQWWEFKSKHMDKVIF 347
++ PD D K RRP YD T+ +P +L EG Q+WE K+KH D++
Sbjct: 32 WMHPDNLADEKGRRPDHPDYDQSTMKVP-----DLREGHCTPMLLQYWEVKAKHFDEITL 86
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQ 406
FK+GKFYE+F DA +L++M ++PH GFPE + L G+R +VVEQ
Sbjct: 87 FKVGKFYEIFYYDAVFAQAACNLRWMGNNKKPHVGFPEVSLYEYSSVLVNAGFRTVVVEQ 146
Query: 407 TETPEQLELRRKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDAS---YLMAL--TE 460
E ++ K +G K D VVKRE C T GTLT +L +P + YLMAL ++
Sbjct: 147 VERVGEMN---KGQGRKSDAVVKREACQAHTAGTLTHEVMLKNSPSPAQPNYLMALWFSD 203
Query: 461 SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLS 520
P + FG CVVD TS G D D +L +L L+P E++ +
Sbjct: 204 GCTHPGALGDRLSFGCCVVDCTTSTFKYGWFEDKPDRQLLRTILITLQPRELLADKKSIP 263
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
R + P V WD T Q E
Sbjct: 264 TAVHRLLQGLAVPPTVTQW----HHWDPNTE-----------------------HGRQDE 296
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
D LP V A G L YL+++ L E + FA +E L S G
Sbjct: 297 SD--EPLP---------------VQKACGAVLAYLRQTMLYEAVTSFATWEKLDTSNAGS 339
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
+VLDA ALE LEV N+ G G+L QL+H VT FGKRLLR W+ PL
Sbjct: 340 SG----LVLDANALEQLEVLRNT-DGKLEGSLLNQLDHTVTPFGKRLLRQWVCCPLRAKT 394
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA 760
R D V L + A + R + +LPD+ER R+FA R K VLY +
Sbjct: 395 DTDRRLDVVDWLLERTELVA-DLRSRMRKLPDIERRQNRVFALGLQLER---KAVLYGEV 450
Query: 761 AKKQLQEFISALHGCELMDQACS-------------SLGAILENTESRQLHHILTPGKGL 807
++ +F+ L + D+ + +L A+L+ L P + L
Sbjct: 451 ESSRIAQFMELLAALKEADRCLAMKFSWQQVREGDGALPALLDE---------LIPMEEL 501
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK----EQ 863
+ IL+ V+ + S G YD A K+ I++ L + LK E
Sbjct: 502 GYVDGILEELGSR---VQGSESDGYSAAPGCCPAYDEAQSKIASIKSDLQEELKTVCHEH 558
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD-----YELRSSKKGFFRYWTPNIKKL 918
K +V++ K Y +EVPE PRD E+ S++KGF R T I+ +
Sbjct: 559 LKGCKPQEAKFVSV-KYRYEIEVPER---CAPRDLEAHGLEVSSTRKGFVRLLTQEIRNM 614
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
EL E + L + +L F +H + + MV A L +L
Sbjct: 615 TEELDATEERMKDCLYPFMAQLFKDFHKHTIRLQDMVQRLATLDCLL 661
>gi|336110046|gb|AEI16791.1| mutS protein 6 [Gambelia wislizenii]
Length = 361
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 193/373 (51%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNQLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGYKVVRVEQMETPEMMEARCRSMAHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L S YL+ + E A +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDSDFTETHNKYLLCIKEKCDDSAGLHCT--YGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 HLGQFLDDRHHSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLAAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+S V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENANSGVVLPPVIRSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +D+ +L A+F E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMARFEEYVPVDTDIGKGIKSSSIFAKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+FEN+
Sbjct: 349 GVTLANLEIFENA 361
>gi|336110020|gb|AEI16778.1| mutS protein 6 [Physignathus cocincinus]
Length = 361
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 197/377 (52%), Gaps = 45/377 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
R++C +++KGT T L + YL+ + E + S +G+C VD +
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKE--KVGDSTGLSHTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD S L LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVLKGLLPSTVQEGLAAGSQFW 240
Query: 547 DAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELIST 597
+A T+ + I++ Y NK +SN + + AE D L PG SEL
Sbjct: 241 NASKTLKIFIEDGYFE------NKENSNSRLALPPVIRSMTAENDSLGLTPGENSEL--- 291
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKP 645
LSALGG ++YLKK +D +L AKF E +P S F +++
Sbjct: 292 ------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQR- 344
Query: 646 YMVLDAPALENLEVFEN 662
MVLD L NLE+ EN
Sbjct: 345 -MVLDGVTLANLEILEN 360
>gi|336110036|gb|AEI16786.1| mutS protein 6 [Chalarodon madagascariensis]
Length = 361
Score = 216 bits (549), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 136/373 (36%), Positives = 192/373 (51%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS+H D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVL 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+++ E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLSIKE--KCDDSAGLQRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LG+ +DD S LL+ PV+++ S ET++ + + + L S+FW
Sbjct: 181 YLGEFLDDRHSSRFRTLLAHYTPVQVLFERGNPSTETQKILKSLLPSAVHEGLAAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+S V + AE D L PG EL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENANSGVVLPPVIKSMTAESDSLGLTPGENHEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKFE-LLPC---------SGFGDMAKKPYMVLD 650
LSALGG ++YLKK +D +L AKFE +P SG MVLD
Sbjct: 292 ---ALSALGGCVYYLKKCIIDREILSMAKFEXYVPVDSDVGKGIKSGSIFTKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLSNLEILENA 361
>gi|336109980|gb|AEI16758.1| mutS protein 6 [Shinisaurus crocodilurus]
Length = 360
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 195/374 (52%), Gaps = 40/374 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D V+F+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPGTLFVPEDYLKNCTPGMRKWWELKSQNFDCVVFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLVHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVVDVAT 483
RE+C +++KGT T L + D S YL+ + E S R +G+C VD
Sbjct: 123 REVCRIISKGTQTYSIL---DGDCSETHNRYLLCVREKVDSAGLH---RTYGVCFVDTTV 176
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+ LGQ +DD CS LL+ PV+I+ S ET++ + + L S
Sbjct: 177 GKFYLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKIFKGLLSSTVQEGLSAGS 236
Query: 544 EFWDAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS 600
+FW+A T++E + A S + + AE D L P G++
Sbjct: 237 QFWNASKTLKTLIEEGYFQGKENASSQLVLPPVIRSMTAESDSLGLTP---------GEN 287
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMV 648
G LSALG +FYLKK +D+ LL AKF E +P S F +++ +V
Sbjct: 288 GELALSALGSCVFYLKKCIIDQELLSMAKFEEYIPVDVDIAKGMKSXSTFAKTSQR--VV 345
Query: 649 LDAPALENLEVFEN 662
LD L NLE+ +N
Sbjct: 346 LDGVTLANLEILQN 359
>gi|336110014|gb|AEI16775.1| mutS protein 6 [Leiolepis belliana]
Length = 361
Score = 215 bits (548), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 196/369 (53%), Gaps = 29/369 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG K+L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDGVIFYKVGKFYELYHMDAVVGVKKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
R++C +++KGT T L + YL+ + E + S +G+C VD +
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KVGDSAGLHHTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ DD CS L L + PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YVGQFSDDRHCSRLRTLFAHYTPVQILFERGNPSAETQKVLKSLLPSIVQESLTAGSQFW 240
Query: 547 DAETTV-LEIKNIYNRITAESLN--KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T+ + I++ Y + T + + + + AE D L PG SEL
Sbjct: 241 NASKTLKILIEDGYFQDTENTSSGLALPPVIRSMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPA 653
LSALGG ++YLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ALSALGGCIYYLKKCIIDKEILSMAKFEEYVPVDVDIGKGVKSHNIFAKTSQRMVLDGVT 351
Query: 654 LENLEVFEN 662
L NLE+ +N
Sbjct: 352 LANLEILQN 360
>gi|336110018|gb|AEI16777.1| mutS protein 6 [Phrynocephalus mystaceus]
Length = 360
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 195/370 (52%), Gaps = 30/370 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTE-SNQSPASQSTDRCFGICVVDVATSR 485
R++C V++KGT T L D YL+ + E +N S T +G+C VD +
Sbjct: 123 RKVCRVISKGTQTYSILDGDFSDTHNRYLLCIKEKANDSAGGCHT---YGVCFVDTTVGK 179
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ +DD CS L L++ PV+I+ S ET++ + + L S+F
Sbjct: 180 FYVGQFLDDRHCSRLRTLVAHYTPVQILFERGNPSVETQKVFKSLLPSTVQEGLAAGSQF 239
Query: 546 WDAETTV-LEIKNIYNRITAESLNKADSNVANSQ-AEGDGLTCLPGILSELISTGDSGSQ 603
W+ T+ + I++ Y + + N V S AE D L P G++G
Sbjct: 240 WNGSKTLKILIEDGYFKDKDDDSNPTLPPVVKSMTAESDSLGLTP---------GENGEL 290
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPA 653
LSALGG ++YLKK +D+ +L AKF E +P G G ++ + MVLD
Sbjct: 291 ALSALGGCVYYLKKCIIDKEILSLAKFEEYVPVDVDIGKGIKSRSIFAKSSQRMVLDGVT 350
Query: 654 LENLEVFENS 663
L NLE+ N
Sbjct: 351 LANLEILRNG 360
>gi|336110068|gb|AEI16802.1| mutS protein 6 [Sauromalus ater]
Length = 361
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 193/370 (52%), Gaps = 29/370 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L A YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFAETHNKYLLCIKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLTAGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+A T++E ++ A + + AE D L PG SEL
Sbjct: 241 NASKTLKTLIEEGYFQDKENANGEVILPPVIKSMTAESDSLGLTPGENSEL--------- 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPA 653
LSALG +FYLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ALSALGCCVFYLKKCIIDQEILSMAKFEEYVPVDIDIGKGIKSSSIFSKTNQRMVLDGVT 351
Query: 654 LENLEVFENS 663
L NLE+ EN+
Sbjct: 352 LANLEILENA 361
>gi|336110070|gb|AEI16803.1| mutS protein 6 [Sceloporus variabilis]
Length = 361
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/373 (37%), Positives = 194/373 (52%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSMSHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L A YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFAETHNKYLLCMKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHNTPVQILFERGNPSAETQKIMKSLLPSTVQEGLTAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + ++S V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENSNSGVVLPPVIRSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMAKFKEYVPVDIDIGKGTKSSSIFAKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|336110030|gb|AEI16783.1| mutS protein 6 [Anolis carolinensis]
Length = 361
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/375 (35%), Positives = 195/375 (52%), Gaps = 39/375 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP T+++P D+L+N + G ++WWE KS++ D V+F+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTIFVPEDYLKNCTPGMRKWWELKSQYFDCVLFYKVGKFYELYHMDAVVGVSKLGLA 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE + L +KGY+V+ +EQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAYDRFSNTLVQKGYKVVRIEQMETPEMMEARCKSMAHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L ++ + YL+ + E + S +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSDTHSKYLLCIKE--KCDDSAGLHYTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS L LL+ PV+I+ S ET++ + + + L+ S+FW
Sbjct: 181 YLGQFLDDRHCSRLRTLLAHYPPVQILFERGNPSGETQKILKSLLPSSVQEGLIAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
A T +K + + +S V + AE D L PG SEL
Sbjct: 241 KASKT---LKTLIEEDYFQDKENPNSGVVLPPVIKSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF------------ELLPCSGFGDMAKKPYMV 648
LSALG ++YLKK +D+ +L AKF E+ S F ++ MV
Sbjct: 292 ---ALSALGCCIYYLKKCIIDKDILSMAKFEEYVPVDIDIGKEIKTSSIFAKTNQR--MV 346
Query: 649 LDAPALENLEVFENS 663
LD L NLE+ EN+
Sbjct: 347 LDGVTLANLEILENA 361
>gi|328863363|gb|EGG12463.1| hypothetical protein MELLADRAFT_46541 [Melampsora larici-populina
98AG31]
Length = 915
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 184/673 (27%), Positives = 310/673 (46%), Gaps = 85/673 (12%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-EQPHCGFPERNFSM 389
+ Q+WE K +H D V+FF+ GKF EL+E DA +G +E DL+ K + G PE +
Sbjct: 5 ETQFWEIKQRHFDTVLFFQKGKFSELYEGDAMIGHREFDLKITKRVKMSMVGVPETSVDF 64
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRK---------------EKGSKDKVVKREICAV 434
+ K KGY+V V+Q ET E+R K + G+K+ +V+RE+ +V
Sbjct: 65 WIAKFLAKGYKVCKVDQCETALGAEMRNKGSLPSSKSAKSQPKPKPGAKE-IVRRELRSV 123
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
VT GT+ +G +L+ + A+ LMA+ E+ +S FG+ ++D +T+ L D
Sbjct: 124 VTSGTIVDGNILTDDA-ATCLMAIKET----IGESGLPIFGVVILDASTAEFNLSYFDDS 178
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ + L ++S RP EI+ + L+ T R + + ++ +EF + + +
Sbjct: 179 ANRTHLETIMSRFRPKEIVHEKSGLTTSTIRVLKNIASSDCTWTILKSNEFLQIDECMEK 238
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
+ ++ + NK + E IS S + + ALGG L+Y
Sbjct: 239 LSELFGEV-----NKP--------------------IPEAISAFHSKPETMMALGGLLWY 273
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
L + LD+ LL ++L M LD + +LE+ + DS L
Sbjct: 274 LGQLNLDKELLSCDNVKVLDV-----FRPTETMQLDGKTISDLELLQGDLGEDSR--LLK 326
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
LN C+T FGKRL R WL PL ++ I R D+V L + P ++ L+ LPD+E
Sbjct: 327 LLNRCITPFGKRLFRHWLCSPLQSASAIEMRLDSVTYL--IEHPDFVDQFGTLTGLPDLE 384
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL++R+ A S ++ F+ L + +L + +
Sbjct: 385 RLISRIHAGSCT------------------VKNFLKVLKSFSKIQTTLETLKTTIGDDPP 426
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
+ L ++ K +P + ++ ++ F E ++P G D YD+A ++ +E E
Sbjct: 427 KILEELI---KKVPDVAQLIIDIEEMFTLDEEKKD--LLPLEGKDELYDAAIEEEREAEG 481
Query: 855 SLTKHLKEQRKLLGDTSITYVTIG-KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
SL L+ +KLL + Y IG KD+Y ++VP ++ P ++ S K RY++P
Sbjct: 482 SLDDELEAAKKLLKSKDVVYKHIGIKDIYQIQVPGKIKA--PSNWTKMSGTKDCARYYSP 539
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHA 973
+L+ +L QA +K SALK R+ F + + W V A + ++ SL A
Sbjct: 540 QSAQLVKKLKQAREKKTSALKDFHLRVFALFDQSYPDWLLTVKTVAEIDCLI---SLAQA 596
Query: 974 FLILQSNSCSSEM 986
+ + SC E+
Sbjct: 597 SMAIGEPSCRPEI 609
>gi|336109962|gb|AEI16749.1| mutS protein 6 [Elgaria multicarinata]
Length = 361
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 191/378 (50%), Gaps = 47/378 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N S G ++WWE KS++ D V+F+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPGTLFVPEDYLKNCSPGMRKWWELKSQNFDCVVFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRK---EKGSKDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSSVLVQKGHKVVRVEQMETPEMMEARCKSLVHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L S + YL+ + E A R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDSDCLETHNRYLLCVKEKVDDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSAETQKILKALLSSTMQESLSAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANS----------QAEGDGLTCLPGILSELIS 596
+A T+ + E + N +N AE D L PG EL
Sbjct: 241 NATKTL-------KTLIEEGYFQGQENASNRXILPPVIRSMTAESDSLGLTPGENCEL-- 291
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKK 644
LSALG +FYLKK +D+ L AKF E +P S F ++
Sbjct: 292 -------ALSALGSCVFYLKKCIIDQELFSMAKFEEYIPVDVDIAKGMKSSSIFAKTXQR 344
Query: 645 PYMVLDAPALENLEVFEN 662
MVLD L NLE+ +N
Sbjct: 345 --MVLDGVTLANLEILQN 360
>gi|336110026|gb|AEI16781.1| mutS protein 6 [Trapelus agilis]
Length = 358
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 194/375 (51%), Gaps = 44/375 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L D YL+ + E S S C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSDTHNRYLLCIKEK----VSDSAGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L L++ PV+I+ S ET++ + + + L P S+
Sbjct: 179 KFHVGQFLDDRHCSRLRTLVAHYTPVQILYERGNPSAETQKVLKGLLSSTVQESLAPSSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSN-------VANSQAEGDGLTCLPGILSELIST 597
FW+ T L+I + + K DS+ + AE D L P SEL
Sbjct: 239 FWNGSKT-LKI------LIEDGYFKDDSSDPTLPPVIKAMTAESDSLGLTPSENSEL--- 288
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------M 647
LSALGG ++YLKK +D+ +L AKF E P G G ++ + M
Sbjct: 289 ------ALSALGGCVYYLKKCIIDKEILSLAKFEEYXPVDVDIGKGIKSQSIFAKGSQRM 342
Query: 648 VLDAPALENLEVFEN 662
VLD L NLE+ +N
Sbjct: 343 VLDGVTLANLEILQN 357
>gi|336110006|gb|AEI16771.1| mutS protein 6 [Ctenophorus isolepis]
Length = 361
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 140/379 (36%), Positives = 198/379 (52%), Gaps = 49/379 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E S ST C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKEK----VSDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVFKGLLPSTVQESLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFE------DKENGNGRLALPPVIRSMTAENDPLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSNSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFEN 662
+ MVLD L NLE+F+N
Sbjct: 344 R--MVLDGVTLANLEIFQN 360
>gi|403332270|gb|EJY65139.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1425
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 190/739 (25%), Positives = 332/739 (44%), Gaps = 104/739 (14%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
FL P++ D +RRP D YDP T+++P ++ S +Q+WE K H DKV+ F+ GK
Sbjct: 389 FLLPEKILDGNKRRPDDPKYDPSTIFIPQHEMQKFSPFLQQYWEIKRTHFDKVLCFQKGK 448
Query: 353 FYELFEMDAHVGAKELDLQYMKGEQP-------HCGFPERNFSMNVEKLARKGYRVLVVE 405
FYEL+ +DA +G L +Q+ G P G E+N + + ++L G++V V+E
Sbjct: 449 FYELYYIDALIGHYFLKIQWSGGANPINYLQAIQVGIHEKNLNKSCQELIDIGFKVAVIE 508
Query: 406 QTETPEQLELR-------------RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDA 452
Q E +++ R + + +++VKR++ + T+G + + S + +
Sbjct: 509 QVEDKHEVDKRMKINNNNNFMKNRMMMQKTHEQLVKRDLSGIYTRG-IAPYDPSSVDYET 567
Query: 453 SYLMALTESNQS-PASQSTDRCFGICVVDVA-----TSRIILGQVMDDLDCSVLCCLLSE 506
+++AL S +S PAS D I + VA T +I +GQ +D S + LL +
Sbjct: 568 KWILALFVSTRSTPASFGQDPHIRIDKISVAFFDNTTLQIHMGQFDEDQLYSKMRTLLCQ 627
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI-YNRITAE 565
+RPVE+I +S + + + PL DL +S L + N+ +++
Sbjct: 628 IRPVEVIYDKESISLDVVKML---KEQPLAPDLNSIS---------LRLNNVDFHKGIQI 675
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+LN G + P +L + + A + YL+ + + +L
Sbjct: 676 ALN----------LYGPDVNQWPKVLQQFRQSQHEYEPTWIAFAMMVMYLQNRLVADQIL 725
Query: 626 RFAKFELL-PCSGFGDMAKKPYMVLDAPALENLEVFE--NSRSGDSSGTLYAQLNHCVTA 682
+ L P + K +M +DA A+ +LE+ E + G+L+ L++ T
Sbjct: 726 KLTDIHLYDPINQL-----KTHMEIDAQAVRHLELLEVIGTEKPKVEGSLFHYLDYTKTV 780
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGL-RGVNQPFALEFRKALSRLPDMERLLARLF 741
FGKRLL+ W++ PLY+ I R D++ R + F L+ + L LPD+E+ ++
Sbjct: 781 FGKRLLKKWISSPLYDIDKINSRLDSIEDFNRHPDLIFKLQ--EKLKMLPDLEKECTNIY 838
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
S R + ++ +E + L++F + L + ++Q E +S++L +L
Sbjct: 839 KLS---TRANISLLTFEKLDIESLRDFFNLLEKIKFVNQILGIFKTAKEGFKSKRLKALL 895
Query: 802 T---PGKG----------------------------LPAIVSILKHFKDAFDWVEANNSG 830
T P K P I + + F+ W +N
Sbjct: 896 TMKDPTKKQPLKNEDIKPKREQLDSQTSNQSQTTALFPEINNAIAEFEALIMWSNGSNGE 955
Query: 831 RII-PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS---ITYVTIGKDLYLLEV 886
+I P D DYD A K+++EIE L HL+E R + G S I + Y+LE+
Sbjct: 956 KIPEPIEEFDADYDIAKKRIQEIEKKLDNHLQEVRDMFGYKSSKEIKFAHSTHQRYMLEI 1015
Query: 887 PESLR--GSVPRDYEL--RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
P+ L G P D+EL S+ + ++ T I+ + EL AE + A+ + +
Sbjct: 1016 PKVLVEGGKRPPDFELVKTSTAQVNLKFITSKIRTYVSELEDAEYNIKIAIMPFICSIFE 1075
Query: 943 QFCEHHNKWRQMVAATAGL 961
F + W Q+V+ A +
Sbjct: 1076 IFRQKRRIWSQIVSCLAEI 1094
>gi|336110058|gb|AEI16797.1| mutS protein 6 [Petrosaurus mearnsi]
Length = 361
Score = 213 bits (543), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 194/373 (52%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSMSHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCVKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHNTPVQILFERGNPSAETQKIMKSLLPSTVQEGLTAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + ++S V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEGYFQDKENSNSGVVLPPVIRSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMAKFEEYVPVDTDIGKGTKSSSIFAKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|145532012|ref|XP_001451767.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419433|emb|CAK84370.1| unnamed protein product [Paramecium tetraurelia]
Length = 1111
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 197/743 (26%), Positives = 340/743 (45%), Gaps = 84/743 (11%)
Query: 276 VMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
+ D E F E F+ PD RDA+ RRP D YDP TL +P + LS +Q+
Sbjct: 109 ITKDAEEFFRTAELLLPSFVQPDFIRDAEGRRPNDPNYDPSTLDIPIAQYQKLSPMFRQY 168
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELD--LQYMKGEQPHCGFPERNFSMNVE 392
W K H D ++FF+ G++ + DA + A+ + L + ++P + +
Sbjct: 169 WNAKKAHYDSLVFFRCGRWINVMYNDAIIIARMFNRYLGFWGKDRPCLTVYDSQLPIYQR 228
Query: 393 KLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDA 452
L KG+++++VEQ E + ++ KE+G +VVKREI ++++GTL + + + ++
Sbjct: 229 TLLEKGHKIMLVEQLE---KADVANKEEG---EVVKREITQLISRGTLQDLSDMDSY-ES 281
Query: 453 SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEI 512
L+ L S+ + +G+ +VD T+ L Q DD + L ++ + +PVE+
Sbjct: 282 RNLLVLVCSSAPVNLKGHKYSYGVSIVDCTTNNFYLDQFFDDEQSNQLRSIIYKTKPVEV 341
Query: 513 IKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY------------- 559
I + +PE E+ +++ NP++ + EF D E ++K Y
Sbjct: 342 I--LSKATPEIEK-MMKTICNPII--ISSKKEFKDCEYIFEQLKVEYLEKKKTQGKKTKL 396
Query: 560 -------------NRITAE-----SLNKA-------DSNVANSQAEGDGLTC--LPGILS 592
++I E ++N+ D + S EGD + P +L
Sbjct: 397 STNSSFEGIVLPSDKIEPEHHIETNINQGLYKGQPDDIIMEESHQEGDYVLSDEYPSLLV 456
Query: 593 ELI---------------STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG 637
EL ST S L + L Y+++ + ++ R KF+ L
Sbjct: 457 ELEKQYYFEKKLAQDEDESTYYSYYFTLQSFYIKLCYMRQLLIHTSVYRRGKFQFLD--- 513
Query: 638 FGDMAKKPYMVLDAPALENLEVFE-NSRSGDSS-GTLYAQLNHCVTAFGKRLLRTWLARP 695
+ +K + LD+ ALE+LE+F+ N ++ SS G+L+ LN CVT FGKRLL W+ P
Sbjct: 514 -SNFNQKLNLYLDSQALESLEIFDVNLQTKVSSKGSLFEYLNKCVTPFGKRLLTKWVQSP 572
Query: 696 LYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVV 755
L N IRERQD + L +P EF++ + +PD+ER + R F + ++ + +
Sbjct: 573 LLNHKHIRERQDCIRDLMDFIEP-CDEFQRRIRSIPDLERNIIRCFNTIHSHKLKAVPIS 631
Query: 756 LYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILK 815
E K +L+E + + + L N +S +L IL+ + + + + LK
Sbjct: 632 GGESFGKVKLKEITQVIKHIKAASETFKVFENYLHNFKSNKLKKILSYKENITILNTALK 691
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ G P GV +YD A K+ +I SL + LK+ + L I+Y
Sbjct: 692 ELEKCIQI----QDGEPQPVKGVSPEYDQAFDKMTDIIDSLEQELKKWQTKLKCPQISYH 747
Query: 876 TIGKDLYLLEVPESLRGS--VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESAL 933
GK Y +E+P+ S P++ + S KKGF R+ T I++ + L E E L
Sbjct: 748 H-GKIRYQIEIPDQCLESNQKPKELVITSKKKGFQRFQTDFIEQQIFHLKVVEDELSQKL 806
Query: 934 KSILQRLIGQFCEHHNKWRQMVA 956
+ +F + ++ Q+++
Sbjct: 807 IPFINDYFTKFYSYRKEFLQLIS 829
>gi|336110082|gb|AEI16809.1| mutS protein 6 [Uta stansburiana]
Length = 361
Score = 213 bits (542), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 194/373 (52%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSMSHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCMKE--KCDDSAGLQRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET++ + + ++ L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHNTPVQILFERGNPSAETQKIMKSLLPSTVLEGLTAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + ++S V + AE D L PG S L
Sbjct: 241 NASKT---LKTLIEEGYFQDKENSNSGVVLPPVIRSMTAESDSLGLTPGENSXL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +D+ +L AKF E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMAKFEEYVPVDIDIGKGTKSSNIFAKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|336110008|gb|AEI16772.1| mutS protein 6 [Draco blanfordii]
Length = 361
Score = 213 bits (541), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 197/374 (52%), Gaps = 39/374 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WW KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWXLKSQYFDCVIFYKVGKFYELYHMDAVVGVSKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFCNILVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + + YL+++ E ST C +G+C +D
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHSRYLLSIKEK----VGDSTGLCHTYGVCFIDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L LL+ PV+II S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLLAHYTPVQIIFERGNPSVETQKVLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKAD----SNVANSQAEGDGLTCLPGILSELISTGDS 600
FWDA T L+I N + +++ + + AE D L PG SEL
Sbjct: 239 FWDASKT-LKILNEDGYFEDKEKDRSKPVLPPVIRSMTAENDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMV 648
LSALGG + YLK+ +D+ +L AKF E +P S F +++ MV
Sbjct: 292 ---ALSALGGCVSYLKRCIIDKEILSMAKFEEYIPVDVDIGKAIKSQSVFAKTSQR--MV 346
Query: 649 LDAPALENLEVFEN 662
LD L NLE+ +N
Sbjct: 347 LDGVTLVNLEILQN 360
>gi|336110034|gb|AEI16785.1| mutS protein 6 [Brachylophus fasciatus]
Length = 361
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 195/376 (51%), Gaps = 41/376 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEVAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C ++++GT T L A YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISRGTQTYSILDGDFAETHNKYLLCIKE--KCDDSAGLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD S LL+ PV+I+ S ET + + + L S+FW
Sbjct: 181 YLGQFLDDRHSSRFRTLLAHYTPVQILFERGNPSAETLKILKSLLPCAVQKGLTAGSQFW 240
Query: 547 DAETTVLE-IKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELIST 597
+A T+ I+ Y + +K D+N + + AE D L PG SEL
Sbjct: 241 NASKTLKTLIEEDYFQ------DKEDANGEVILPPVIKSMTAESDSLGLTPGENSEL--- 291
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------M 647
LSALG +FYLKK +D+ +L AKF E +P G G + + M
Sbjct: 292 ------ALSALGSCVFYLKKCIIDQEILSMAKFEEYVPVDTDIGKGIKSSSIFYKTNQKM 345
Query: 648 VLDAPALENLEVFENS 663
VLD L NLE+ EN+
Sbjct: 346 VLDGVTLANLEILENA 361
>gi|336110050|gb|AEI16793.1| mutS protein 6 [Leiosaurus catamarcensis]
Length = 355
Score = 212 bits (539), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/369 (36%), Positives = 191/369 (51%), Gaps = 35/369 (9%)
Query: 316 TLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +MKG
Sbjct: 1 TLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMKG 60
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVKREIC 432
H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV RE+C
Sbjct: 61 TWAHSGFPEIAFDRFSNILVQKGHKVVRVEQVETPEMMEARCRSMSHPTKYDRVVHREVC 120
Query: 433 AVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+++KGT T L + YL+ + E + S R +G+C VD + LGQ
Sbjct: 121 RIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLQRIYGVCFVDTTVGKFYLGQ 178
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
+DD CS LL+ PV+I+ S ET++ + + + L+ S+FW+A
Sbjct: 179 FLDDRHCSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLIAGSQFWNASK 238
Query: 551 TVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDSGSQV 604
T +K + + +S V + AE D L PG SE V
Sbjct: 239 T---LKTLLEEGYFQDKENTNSGVVLPPVIRSMTAESDSLGLTPGENSEF---------V 286
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKF-ELLPC---------SGFGDMAKKPYMVLDAPAL 654
LSALG +FYL+K +D+ +L AKF E +P SG + MVLD L
Sbjct: 287 LSALGSCVFYLRKCMIDKEILSMAKFEEYVPVDADIGKGIKSGSIFVKTNQRMVLDGVTL 346
Query: 655 ENLEVFENS 663
NLE+ EN+
Sbjct: 347 ANLEILENA 355
>gi|336110024|gb|AEI16780.1| mutS protein 6 [Pogona vitticeps]
Length = 361
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 193/378 (51%), Gaps = 47/378 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E S S C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKEK----VSDSAGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVFKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS---- 600
FW+A T+ +I E + + G+G LP ++ + + DS
Sbjct: 239 FWNASKTL--------KIFIE------DGYFDDKENGNGRLALPPVIRSMTAENDSLGLT 284
Query: 601 ----GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKK 644
LSALGG ++YLKK +D +L AKF E +P S F +++
Sbjct: 285 PAENSELALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQR 344
Query: 645 PYMVLDAPALENLEVFEN 662
MVLD L NLE+F+N
Sbjct: 345 --MVLDGVTLANLEIFQN 360
>gi|336110004|gb|AEI16770.1| mutS protein 6 [Ctenophorus adelaidensis]
Length = 360
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 197/380 (51%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE K ++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 2 YDPSTLFVPEDYLRNCTPGMRKWWELKGQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 61
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 62 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 121
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E S ST C +G+C VD
Sbjct: 122 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKEK----VSDSTGLCHTYGVCFVDTTVG 177
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + L S+
Sbjct: 178 KFYVGQFLDDRHSSRLRTLLAHYIPVQILFERGNPSVETQKLFKGLLPSTVQEGLAAGSQ 237
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 238 FWNASKTLKILIEDGYFE------DKENGNGRLALPPVIRSMTAENDSLGLTPGENSEL- 290
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 291 --------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 342
Query: 644 KPYMVLDAPALENLEVFENS 663
+ MVLD L NLE+F+N
Sbjct: 343 R--MVLDGVTLANLEIFQNG 360
>gi|336375399|gb|EGO03735.1| hypothetical protein SERLA73DRAFT_119383 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388457|gb|EGO29601.1| hypothetical protein SERLADRAFT_365596 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1215
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 190/695 (27%), Positives = 310/695 (44%), Gaps = 97/695 (13%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D F FL D RD +PG+ YDPRTLY+P +K W +F F K
Sbjct: 296 DPFSFL-VDVRDKDGVKPGEPGYDPRTLYIP----------KKAWADFTP-------FEK 337
Query: 350 MGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
+L+E DA VG E DL+ + + G PE +F+ K KGY+V V+Q E
Sbjct: 338 -----QLYEDDARVGHTEFDLKLTQRVKMSMVGVPEMSFNFWAAKFLGKGYKVGRVDQAE 392
Query: 409 TPEQLELRR---KEKG------SKDKV-VKREICAVVTKGTLTEGELLSANPDASYLMAL 458
T E+R K KG K+K+ ++RE+ V T GTL + +LL+ + A + +++
Sbjct: 393 TALGAEMRMAADKTKGKPSADKGKEKIHIRRELNKVYTNGTLVDEDLLT-DEQAGHCISI 451
Query: 459 TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANM 518
E S+ FG+CV+D ATS+ L DD+ + L ++ +LRP E+I
Sbjct: 452 REDTSDVKKGSS---FGLCVLDSATSQFDLSAFDDDVCMTKLETMMRQLRPEEVIFTKGN 508
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTV------LEIKNIYNRITAESLNKADS 572
LS T R L+ ++P + W + V IK + N + D
Sbjct: 509 LSVPTSR---------LLKAILPAACLWTSLRDVEGFPYDQTIKELNNMFAGDEDEDVDG 559
Query: 573 NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL 632
A + A +G+ + G + ALG TL+YL++ +D+ L F +
Sbjct: 560 EEALNSAVPEGIKDMAGC-----------RDAIEALGATLWYLRQLNIDKDLFSMKNFNV 608
Query: 633 LPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ + K +VLD L ++EVF N G GTL+ L C+T FGKRL R WL
Sbjct: 609 -----YDPLKKGQNLVLDGQTLAHIEVFVNDE-GTDEGTLHKLLGRCITPFGKRLFRIWL 662
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSN 752
PL N I R DAV L ++ F F LPD+ER+++R+ A +
Sbjct: 663 CVPLRNVTDINARLDAVEALMD-HETFEETFTDLAKGLPDLERIVSRIHAKN-------- 713
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS 812
++++F+ L ++ L E ES+ + +L + P +
Sbjct: 714 ----------CKIKDFMKVLAAFRKLNMGLGKLTDSSETFESKTITSLL---RSAPDLTP 760
Query: 813 ILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSI 872
+K+ + F + ++ ++P G D YD ++ E+E +L L++ K LG T
Sbjct: 761 HIKNVESRF--IVDKDTDNLLPVEGKDDVYDEVMAEITELEETLDSQLRKFEKKLGITLT 818
Query: 873 TYVTI--GKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKE 930
+ + K++YL++ + ++P D+ K R+ P+++ + +L +A +
Sbjct: 819 WWHSAQGNKEIYLVQTKVGQK-NIPDDWTKSGGTKAAARWLVPSLQSTIRKLKEARENRN 877
Query: 931 SALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+A+K RL +F W + V A L +
Sbjct: 878 TAIKEFKNRLYAEFDADRGVWLRAVRVLAELDCLF 912
>gi|336110016|gb|AEI16776.1| mutS protein 6 [Moloch horridus]
Length = 361
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 197/380 (51%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGAWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E ST C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCIKEK----VGDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKVFIEDGYFE------DKENGNGRLALPPVIRSMTAENDSLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCIIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFENS 663
+ MVLD L NLE+ +N
Sbjct: 344 R--MVLDGVTLANLEILQNG 361
>gi|336110012|gb|AEI16774.1| mutS protein 6 [Hypsilurus boydii]
Length = 361
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 198/380 (52%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E ST C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCVKEK----VGDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFE------DKENGNGRLALPPVIRSMTAESDSLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D+ +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCIIDKEILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFENS 663
+ MV+D L NLE+ +N
Sbjct: 344 R--MVMDGVTLANLEILQNG 361
>gi|336110038|gb|AEI16787.1| mutS protein 6 [Corytophanes cristatus]
Length = 357
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 191/369 (51%), Gaps = 35/369 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D V+F+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPATLFVPEDYLRNCTPGMRKWWELKSQYFDCVVFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLHHTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS + L++ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRIRTLMAHYTPVQILFERGNPSTETQKVLKSLIPSTVQEGLTAGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+S V + AE D L PG SEL
Sbjct: 241 NASKT---LKTLIEEDYFQDKENANSGVVLPPVIKSMTAESDSLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-SGFGDMAK--------KPYMVLD 650
LSALG +FYLKK +D+ +L A+F E +P + G K MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDKEILSMARFEEYVPVDTNIGKGIKLSNIFTKTNQRMVLD 348
Query: 651 APALENLEV 659
L NLE+
Sbjct: 349 GVTLTNLEI 357
>gi|336110000|gb|AEI16768.1| mutS protein 6 [Chelosania brunnea]
Length = 361
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 138/380 (36%), Positives = 196/380 (51%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L + YL+ + E ST C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSETHNRYLLCIKEK----VGDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVFKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFE------DKENGNGKLALPPVIRSMTAENDSLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCVIDREILSMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFENS 663
+ MVLD L NLE+ +N
Sbjct: 344 R--MVLDGVTLANLEILQNG 361
>gi|336110080|gb|AEI16808.1| mutS protein 6 [Urostrophus vautieri]
Length = 357
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 188/366 (51%), Gaps = 29/366 (7%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNQLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQVETPEMMEARCRAMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E + S R +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKE--KCDDSAGLQRIYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L+ S+FW
Sbjct: 181 FLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLLAGSQFW 240
Query: 547 DAE---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
A T++E ++ S + + AE D L P G++G
Sbjct: 241 SASKALKTLIEEGYFQDKENTNSGVVLPPVIRSMTAESDSLGLTP---------GENGEF 291
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC---------SGFGDMAKKPYMVLDAPA 653
LSALG +FYL+K +D+ +L A F E +P SG MVLD
Sbjct: 292 ALSALGSCVFYLRKCMIDKEILSMANFEEYVPVDTNIGKGIKSGSIFAKTNQRMVLDGVT 351
Query: 654 LENLEV 659
L NLE+
Sbjct: 352 LANLEI 357
>gi|336109994|gb|AEI16765.1| mutS protein 6 [Agama agama]
Length = 360
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/370 (36%), Positives = 196/370 (52%), Gaps = 32/370 (8%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KG++V+ VEQ ETPE +E R K D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGHKVVRVEQVETPEMMEARCKSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C +++KGT T L D YL+ + E S S C +G+C VD
Sbjct: 123 RKVCRIISKGTQTYSILDGDFSDTHNRYLLCIKEK----VSDSAGLCHAYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD CS L L++ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHCSRLRTLVAHYTPVQILYERGNPSVETQKVLKVLQPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSNVANSQ-AEGDGLTCLPGILSELISTGDSGS 602
FW+ T+ + +++ Y + +S + V S AE D L P SEL
Sbjct: 239 FWNGSKTLKILLEDGYFKDKDDSSDPTLPPVIKSMTAESDSLGLTPSENSEL-------- 290
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAP 652
LSALGG ++YLKK +D+ +L AKF E +P G G ++ + MVLD
Sbjct: 291 -ALSALGGCVYYLKKCIIDKEILSMAKFEEYVPVDVDIGKGIESQSIFAKSSQRMVLDGV 349
Query: 653 ALENLEVFEN 662
L NLE+ +N
Sbjct: 350 TLANLEILQN 359
>gi|428186444|gb|EKX55294.1| hypothetical protein GUITHDRAFT_99074 [Guillardia theta CCMP2712]
Length = 1131
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 185/665 (27%), Positives = 301/665 (45%), Gaps = 104/665 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+DA +RRP D YD ++++PPD R ++ Q+Q+W K + D +I K+GKFYEL+E
Sbjct: 205 KDANQRRPTDPDYDASSVFVPPDSFREMTNFQQQYWNIKKCNFDTLILCKLGKFYELYER 264
Query: 360 DAHVGAKELDLQYMKG-------EQPHC-GFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
DA VG KEL+L + G + C G PE K+ GY+V +VE+ E
Sbjct: 265 DALVGHKELNLNFTHGGRDPKNPRRMMCVGVPEACVEATASKIVALGYKVGLVEEMEKAT 324
Query: 412 QLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD----ASYLMALTESNQSPAS 467
+ K+ KV +R + + T GTL + EL+ + + +L+ + ++ P
Sbjct: 325 SM----KKIADGRKVCERSLRKMFTPGTLCDEELIGTHESRPLVSVFLLEESRTSDDPHL 380
Query: 468 QSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI 527
Q G C+VD T R+++G D + LL + P E++ P +S
Sbjct: 381 Q-----LGFCLVDCTTGRLLVGSS----DVNDFEVLLRQYTPYEVLHPRGRMS------- 424
Query: 528 LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCL 587
F +KNI R C+
Sbjct: 425 ----------------SF---------LKNIIRR------------------------CV 435
Query: 588 PGILSELISTGDSGSQVLS-ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY 646
P + G ++ + A+GG L YL+K ++L K E L A + +
Sbjct: 436 PAASWTSLPMGIKEDELAANAVGGVLSYLEKIGKSTSVLAMRKLEFL--EEVRTTASR-H 492
Query: 647 MVLDAPALENLEVFEN---SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
M+LD+ L L V E+ R G+++ L+ ++ T+FGKRLLR W+ARPL IR
Sbjct: 493 MLLDSQTLSGLNVLEHPQEKRRGEAT-CLWHYIDRAATSFGKRLLRWWIARPLVRREDIR 551
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA-- 761
R DAV L+ + A + ++ ++++PD+ER LAR+ S R + + E +A
Sbjct: 552 ARLDAVQNLQ--LEDLAGQLQQLMAKMPDLERKLARVRQHSR---RQEEEQGVAEASATQ 606
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAF 821
++ ++E + L G L+ L E E +L+ + LP S+++ F
Sbjct: 607 RRMVREVVQLLDGFRLVQGVAEMLA---ERQEEISSPLLLSLLRNLPDTSSVIESVSSKF 663
Query: 822 DWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
D A G + G D D + ++ ++++ L ++L E++K + + + KD
Sbjct: 664 DMPLAREKGSLSLLPGFDRSLDDSLRRKEDVDKQLNEYLLEEKKRTSCYKMRFASSSKDP 723
Query: 882 YLLEVPESL-RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
+LLEVP SVP +EL S+ K RY T ++L G L Q E KE A + +R
Sbjct: 724 FLLEVPADFPSSSVPDHFELHSANKSCRRYMT---ERLRGLLVQLEGVKEEA-DDLHRRA 779
Query: 941 IGQFC 945
+G C
Sbjct: 780 MGMLC 784
>gi|452823051|gb|EME30065.1| DNA mismatch repair protein MutS isoform 1 [Galdieria sulphuraria]
Length = 1033
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 198/683 (28%), Positives = 319/683 (46%), Gaps = 101/683 (14%)
Query: 296 GPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYE 355
D RD + R P DV YDP TLY+PP+ R LS QKQ+WE K KH D V+FFK GKFYE
Sbjct: 116 ATDIRDEQHRLPTDVDYDPSTLYIPPEAFRQLSPFQKQFWELKRKHYDIVLFFKKGKFYE 175
Query: 356 LFEMDAHVGAKELDLQYMKG---EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
L++ DA +G L L Y G E G PE +F+ KL GY+V VEQ ET
Sbjct: 176 LYDCDADIGHSVLGLNYTAGGRVEMRCVGVPETSFARYASKLVDNGYKVGRVEQVETTTA 235
Query: 413 LELRRKEKGSKDK---VVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQS 469
RR+ S D V +R + ++TKG+LT E L+ +P + +L+ + + +S
Sbjct: 236 AAQRRRSSDSVDSKIAVCQRSLVRIMTKGSLTVDE-LNGDPSSHFLLCIHQCIRSEK--- 291
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
G +DV+ +G++ D + L +L ++PVEII AI
Sbjct: 292 ----IGFFYLDVSAGYSTVGEMKHDAGLADLEAILLSVQPVEII------------AINC 335
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ PL L +++ + T L L S+ SQ + P
Sbjct: 336 QQKGPLSE----LLKYFTSTTNCL-------------LVHQHSSYGYSQRGAN----FPT 374
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL-PCSGFGDMAKK---- 644
L E + + S AL G L YLK ++ +LRF + C ++K
Sbjct: 375 QLEEFLLRHSTAS---IALFGCLEYLKSLYISVEVLRFDSTVIWDKCCTNEHISKNLSNE 431
Query: 645 --------PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ L + NLE+ + + TL + ++H TA GKRL++ W+ PL
Sbjct: 432 VNWEDRCLGNLSLIGSTIFNLEIVTSRPNKIGGHTLLSFIDHTATAGGKRLIKQWICTPL 491
Query: 697 YNSGLIRERQDAV-AGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
I R D++ LR ++ L + RK LS+ PD+ER + ++ + S+++
Sbjct: 492 ICRSQIERRLDSIEIILRKDSKSNILDQVRKQLSQFPDIERQIVKI----QNMAYCSHQI 547
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
V+++D+ K+++ EF+ L + +D A L +QL IL P + +S +
Sbjct: 548 VMFDDSEKRKVLEFLKFL---KCLDHAVEFL--------KKQLPVILFP--EFDSFISFI 594
Query: 815 KHF--------KDAFD--WVEANNSGRIIPHGGVDMDYDSACK-KVKEIEASLTKHLKEQ 863
++F ++ D + E + R +G ++ DS K +++ IE L + L++
Sbjct: 595 QNFDNNLLHKCRNVLDDLFNEFPDLDR-TENGEMNFSEDSTFKNEIEGIELRLQRILEDF 653
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGFFRYWTPNIKKLL-- 919
R+ + + I + ++ Y LE +S + ++P D+ L S R+WTP IK+L+
Sbjct: 654 REQM-NIDIQWFHRFREAYQLEFSQSALEKTNIPDDFVLMSQTSDKKRFWTPEIKQLVKK 712
Query: 920 -GELSQAESEKESA-LKSILQRL 940
EL +A + ES+ K ILQ+
Sbjct: 713 RNELLEAHTISESSKFKKILQKF 735
>gi|336109968|gb|AEI16752.1| mutS protein 6 [Lepidophyma flavimaculatum]
Length = 358
Score = 209 bits (533), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 192/373 (51%), Gaps = 37/373 (9%)
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +
Sbjct: 1 DPTTLFVPEDYLKNCTPGMRKWWELKSQNFDSVIFYKVGKFYELYHMDAVVGVNKLGLGF 60
Query: 373 MKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVKR 429
MKG H G PE F L +KG++V+ VEQ ETPE +E R K D+VV+R
Sbjct: 61 MKGTWAHAGVPEIAFDKFSNVLVQKGHKVVRVEQMETPEMMEARCKSLAHPTKYDRVVRR 120
Query: 430 EICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
E+C +++KGT T +GEL + YL+ + E A R FG+C VD R
Sbjct: 121 EVCRIISKGTQTYNILDGEL--SETHNKYLLCIKEKFDDSA--GFHRTFGVCFVDTTVGR 176
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
+GQ DD CS L L++ P +I+ S ET++ + + L S+F
Sbjct: 177 FYVGQFPDDRHCSRLRTLVAHYPPSQILFERGNPSAETQKILKGLLSCTVQEGLAAGSQF 236
Query: 546 WDAETTVLE-IKNIYNRITAESLNK--ADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
W+A T+ I+ Y + + + + AE D L PG SEL
Sbjct: 237 WNASKTLKSLIEGGYFQGKENTCGGLLLPQVIRSMTAESDSLGLTPGENSEL-------- 288
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSG-----------FGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL AKF E +P F +++ MVLD
Sbjct: 289 -SLSALGGCIFYLKKCIIDQELLSLAKFEEYVPVDADIMKEKQSANIFAKTSQR--MVLD 345
Query: 651 APALENLEVFENS 663
L NLE+ N
Sbjct: 346 GVTLVNLEIMHNG 358
>gi|336109960|gb|AEI16748.1| mutS protein 6 [Dibamus novaeguineae]
Length = 362
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/384 (36%), Positives = 195/384 (50%), Gaps = 58/384 (15%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD T+++ DFL+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 3 YDSSTVFVSEDFLKNCTPGMRKWWELKSQNYDSVIFYKVGKFYELYHMDAVIGVNELGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KGY+V+ VEQ ETPE +E R K DKVV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFANILVQKGYKVVRVEQMETPEMMESRCKNLAHPTKFDKVVR 122
Query: 429 REICAVVTKGT----LTEGELLSANPDASYLMALTESNQSPASQSTD----RC-FGICVV 479
REIC +++KGT + +G++ + YL+ + E ++TD C +GIC V
Sbjct: 123 REICRIISKGTQTYSIVDGDVAETCAN-KYLLCIKE-------KATDLTGFHCAYGICFV 174
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
D R +GQ +DD S LL+ PV+++ S ETE+ + + + L
Sbjct: 175 DTTVGRFYVGQFLDDRHSSRFRTLLAHYTPVQVLYEKGNPSAETEKILKGLLSSTMQEGL 234
Query: 540 VPLSEFWDAETTVLEI---------KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI 590
S+FW A T+ + +N+ R S+ + + AE D L PG
Sbjct: 235 SAGSQFWSASKTLKTLTEGGYFQDQENVSGRAALPSV------IRSMTAESDSLGLTPGE 288
Query: 591 LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAK------ 643
SEL LSALG +FYLKK +D L AKF E +P D+AK
Sbjct: 289 NSEL---------ALSALGSCVFYLKKCIIDHELFSMAKFEEYVPVD--SDIAKVAESSS 337
Query: 644 -----KPYMVLDAPALENLEVFEN 662
MVLD L NLE+ +N
Sbjct: 338 LFAKTSQRMVLDDVTLTNLEILKN 361
>gi|295657582|ref|XP_002789358.1| predicted protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283878|gb|EEH39444.1| predicted protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 701
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 133/409 (32%), Positives = 206/409 (50%), Gaps = 44/409 (10%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D R PG YDPRT+Y+PP S +KQ+WE K K D V+FFK GKFYEL+E D
Sbjct: 322 DIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 381
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KG+++ V+Q+E+ E+R K+
Sbjct: 382 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQ 441
Query: 420 K------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTD 471
G ++K+++RE+ V+T GTL +G +L + ++Y +A+ E+ N P
Sbjct: 442 GKTGGSVGKQEKIIRRELACVLTSGTLVDGGMLQDDM-STYCVAIKEALVNDLP------ 494
Query: 472 RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT 531
FG+ VD AT + L + +DD+D + +++ RP E++ +++S + R IL++
Sbjct: 495 -VFGLAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELLLEKSVMSTKALR-ILKNN 552
Query: 532 RNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
P L N L P EFW+A+ TV E+ D++ +GD L P
Sbjct: 553 TIPTTLWNYLKPGKEFWEADITVREL---------------DASNYFVSLDGDNLLAWPQ 597
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
+L E +SA G + YL+ ++ L+ F + + + K +VL
Sbjct: 598 VLRE----ARDKEFAMSAFGALVQYLRMLKIERDLITIGNF-----TWYDPIRKATSLVL 648
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
D L NLEVF NS G GTL+ LN CVT FGKR+ + W + N
Sbjct: 649 DGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQWTTPSVTN 697
>gi|295668168|ref|XP_002794633.1| DNA mismatch repair protein msh6 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286049|gb|EEH41615.1| DNA mismatch repair protein msh6 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1200
Score = 209 bits (531), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 142/441 (32%), Positives = 217/441 (49%), Gaps = 60/441 (13%)
Query: 291 KFHFLGPDRR--------DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
K H P+ R D R PG YDPRT+Y+PP S +KQ+WE K K
Sbjct: 315 KAHMSEPEHRYPWLANITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFW 374
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRV 401
D V+FFK GKFYEL+E DA +G + DL+ + G PE + + KG+++
Sbjct: 375 DTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKI 434
Query: 402 LVVEQTETPEQLELRRKEK------GSKDKVVKREICAVVTKGTLTEGELLSANPDASYL 455
V+Q+E+ E+R K+ G ++K+++RE+ V+T GTL +G +L + ++Y
Sbjct: 435 ARVDQSESALGKEMREKQGKTGGSVGKQEKIIRRELACVLTSGTLVDGGMLQDDM-STYC 493
Query: 456 MALTES--NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEII 513
+A+ E+ N P FG+ VD AT + L + +DD+D + +++ RP E++
Sbjct: 494 VAIKEALVNDLP-------VFGLAFVDTATGQFYLAEFIDDVDMTKFETFVAQTRPQELL 546
Query: 514 KPANMLSPETERAILRHTRNP--LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKAD 571
+++S + R IL++ P L N L P EFW+A+ TV E+ D
Sbjct: 547 LEKSVMSTKALR-ILKNNTIPTTLWNYLKPGKEFWEADITVREL---------------D 590
Query: 572 SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE 631
++ +GD L P +L E +SA G + YL+ ++ L+ F
Sbjct: 591 ASNYFVSLDGDNLLAWPQVLRE----ARDKEFAMSAFGALVQYLRMLKIERDLITIGNF- 645
Query: 632 LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+ + + K +VLD L NLEVF NS G GTL+ LN CVT FGKR+ + W
Sbjct: 646 ----TWYDPIRKATSLVLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQW 701
Query: 692 -LARPL-------YNSGLIRE 704
R L Y GL++E
Sbjct: 702 DFLRVLEGFEQIDYTMGLLKE 722
Score = 105 bits (263), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 16/267 (5%)
Query: 723 FRKALSRLPDMERLL-ARLFASSEANGRNSNKVVLYEDA----AKKQLQE--FISALHGC 775
RKA S + D + L+ +FA+S G+ L K+ ++ F+ L G
Sbjct: 651 IRKATSLVLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQWDFLRVLEGF 710
Query: 776 ELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPH 835
E +D ++G + E + L +P + LK++K AFD +A +SG ++P
Sbjct: 711 EQIDY---TMGLLKETGSGEGVIGQLV--SSMPDLSGHLKYWKTAFDRSKAKDSGILVPE 765
Query: 836 GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVP 895
GV+ D+D + K+ EIE L + LK RK LG T+I Y GK++Y LEVP + SVP
Sbjct: 766 AGVEEDFDVSHDKITEIEYELDQLLKRVRKQLGSTAIVYRDNGKEIYQLEVPIKIT-SVP 824
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ ++ S+ K R++ P ++ L+ +L +A+ +K + R +F E+++ W V
Sbjct: 825 KSWDQMSATKQAKRFYFPELRSLIRQLQEAQETHSQIVKEVAGRFYARFDENYSTWLAAV 884
Query: 956 AATAGLTLILLDGSLLHAFLILQSNSC 982
A L ++ SL A L SC
Sbjct: 885 KVVAQLDCLI---SLAKASSALGHPSC 908
>gi|336109972|gb|AEI16754.1| mutS protein 6 [Charina trivirgata]
Length = 360
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 194/377 (51%), Gaps = 44/377 (11%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGSWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C ++++GT T L + YL+ + E + A R +G+C VD +
Sbjct: 123 REVCRIISRGTQTYSILDGDYSETHNKYLLCIKEKIEDSA--GLHRTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
+GQ +DD CS LL+ PV+II S ET++ + + L P S+FW
Sbjct: 181 YVGQFLDDRHCSRFRTLLAHYTPVQIISERGNPSAETQKILKGLISFTVQESLTPGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESL--NKADSN--------VANSQAEGDGLTCLPGILSELIS 596
+A T+ +T E NK ++N + + AE D L P SEL
Sbjct: 241 NASKTL-------KTLTEEGYFQNKENTNSGVTLPPVIRSMTAESDSLGLTPAENSEL-- 291
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------ 646
VLSALG + YL K +D+ LL A F E +P G + + +
Sbjct: 292 -------VLSALGSCVXYL-KCIIDKELLSMANFEEYIPVDVDIVNGTKSSRVFXKTNQR 343
Query: 647 MVLDAPALENLEVFENS 663
MVLD L N E+ +N+
Sbjct: 344 MVLDGVTLANXEILQNA 360
>gi|336110054|gb|AEI16795.1| mutS protein 6 [Morunasaurus annularis]
Length = 361
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/373 (36%), Positives = 191/373 (51%), Gaps = 35/373 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDLTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVK 428
+MKG H FPE F L +KG++V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSCFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
RE+C +++KGT T L + YL+ + E A +G+C VD +
Sbjct: 123 REVCRIISKGTQTYSILDGDFSETHNKYLLCIKEKCDDSAGLY--HTYGVCFVDTTVGKF 180
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
LGQ +DD CS LL+ PV+I+ S ET++ + + + L S+FW
Sbjct: 181 YLGQFLDDRHCSRFRTLLAHYTPVQILFERGNPSIETQKILKSLLPSTVQEGLTTGSQFW 240
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDS 600
+A T +K + + A+S V + AE D L PG SEL
Sbjct: 241 NASKT---LKALIEEGYFQDKENANSGVVLPPLIRSMTAESDTLGLTPGENSEL------ 291
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLD 650
LSALG +FYLKK +DE +L AKF E +P G G + + MVLD
Sbjct: 292 ---ALSALGCCVFYLKKCIIDEEILSMAKFEEYVPVDTNIGKGIKSSSIFVKTNQRMVLD 348
Query: 651 APALENLEVFENS 663
L NLE+ EN+
Sbjct: 349 GVTLANLEILENA 361
>gi|302811241|ref|XP_002987310.1| hypothetical protein SELMODRAFT_125776 [Selaginella moellendorffii]
gi|300144945|gb|EFJ11625.1| hypothetical protein SELMODRAFT_125776 [Selaginella moellendorffii]
Length = 932
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 237/469 (50%), Gaps = 51/469 (10%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF ++ P RD R D +D RT+++P + L+ +S Q+Q+W K +MD V+FFK
Sbjct: 81 KFEWMQPSNIRDGNGRNHSDPLFDVRTVHIPENVLKKMSASQRQYWTTKCHYMDIVLFFK 140
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E+DA +G KELD + C G PE V+KL +GY+V +EQ
Sbjct: 141 VGKFYELYELDAEIGHKELDWKMTISGVGKCRQVGVPESGIEDAVQKLVARGYKVGRMEQ 200
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE--SNQS 464
ET EQ + +R + +V+R++ VVT TLT+G + P+A +L+A+ E N
Sbjct: 201 VETSEQAKAKR----GPNAMVERKLVQVVTPSTLTDGIM---KPEAIHLLAVKEVLENSG 253
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
P++ +G D A +G D+ S L L+ ++ P E++ LSP
Sbjct: 254 PSAV----IYGFAFADAAGGLCYVGSFCDNDAYSALDALVMQIAPQEVLYEIGGLSPSAL 309
Query: 525 RAILRHTRN---PLV-NDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
+ R+ R PLV L P ++F + TVLE+ I +R + K + Q
Sbjct: 310 KVFQRYIRPGSLPLVLTPLQPGADFPE-PATVLEL--ISSRGYFQECVK-----CSGQQP 361
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR--FAKFELLPCSGF 638
G PG+L T D ++ALG + +L + +D + +EL +
Sbjct: 362 G-----FPGVL----DTVDHKDAAMTALGALVSHLHRIKMDAEIYNGVLCAYELY----W 408
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
G +M LD + NLE+ N+ +G +GTL L+ C TAF KRLLR W+ PL +
Sbjct: 409 G------FMRLDGQTIANLELLANTANGGKAGTLMGYLDSCATAFAKRLLRRWICHPLQD 462
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
+ I R D+V L N A E R L ++PD+ERL ARL S+++
Sbjct: 463 TKAINHRLDSVEELL-CNPECAAELRALLRKVPDLERLSARLRGFSDSS 510
>gi|336110022|gb|AEI16779.1| mutS protein 6 [Physignathus lesueurii]
Length = 361
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 197/380 (51%), Gaps = 49/380 (12%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++ D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVSEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLV 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L KGY+V+ VEQ ETPE +E R + D+VV
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVEKGYKVVRVEQVETPEMMEARCRSLAHPTKFDRVVH 122
Query: 429 REICAVVTKGTLTEGELLS--ANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATS 484
R++C ++++GT T L + YL+ + E S ST C +G+C VD
Sbjct: 123 RKVCRIISRGTQTYSILDGDFSETHNRYLLCVKEK----VSDSTGLCHTYGVCFVDTTVG 178
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
+ +GQ +DD S L LL+ PV+I+ S ET++ + + + L S+
Sbjct: 179 KFYVGQFLDDRHSSRLRTLLAHYTPVQILFERGNPSVETQKVLKGLLPSTVQEGLAAGSQ 238
Query: 545 FWDAETTV-LEIKNIYNRITAESLNKADSN--------VANSQAEGDGLTCLPGILSELI 595
FW+A T+ + I++ Y +K + N + + AE D L PG SEL
Sbjct: 239 FWNASKTLKIFIEDGYFE------DKENGNGRLALPPVIRSMTAENDSLGLTPGENSEL- 291
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAK 643
LSALGG ++YLKK +D +L AKF E +P S F ++
Sbjct: 292 --------ALSALGGCVYYLKKCVIDREILPMAKFEEYIPVDVDIGKGIKSHSIFAKTSQ 343
Query: 644 KPYMVLDAPALENLEVFENS 663
+ MVLD L NLE+ +N
Sbjct: 344 R--MVLDGVTLANLEILQNG 361
>gi|290999909|ref|XP_002682522.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
gi|284096149|gb|EFC49778.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
Length = 1998
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 170/572 (29%), Positives = 271/572 (47%), Gaps = 54/572 (9%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
D+F FL +R D KRR D +D TLY+ + NL+ ++Q+W K HMDK++FFK
Sbjct: 1037 DRFPFL-TNRLDDKRRPESDPDFDKSTLYISTGDMSNLTPMEQQYWATKKNHMDKLVFFK 1095
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA + KE DL+ + G PE +F +K GY L VEQTE
Sbjct: 1096 KGKFYELYEEDADIAKKEFDLKITERINMRMAGVPESSFLNYAKKFISLGYDCLRVEQTE 1155
Query: 409 TPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQ 468
T E+ R+KEK + V REIC + T T+T+ + +S N + YL+ + E
Sbjct: 1156 TVEERNERKKEKKTASSCVGREICDITTIATITDLDFISDNGN-QYLLCVKEDIMHAR-- 1212
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
+GI +D++ +G + DD + L+ + P EII S +T++ I
Sbjct: 1213 -----YGITFLDISMDAFYIGFIEDDTHRNQFNTLIHTINPSEIIIEKGQTSVQTKKNI- 1266
Query: 529 RHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
D + V+ K N + + + + L LP
Sbjct: 1267 ------------------DNKRVVIREKKTCNELAQKEF----TGFPTADVTKYFLEDLP 1304
Query: 589 GILSE-LISTGDSGSQVLSALGGTLFYLKKSFLDETLL-RFAKFELLPCSGFGDMAKKPY 646
I + ++ V+S+ G LFYLK ++ LL + KF L G M +
Sbjct: 1305 HISEDAIVKQFLDNDLVMSSFGAALFYLKYLRKEDVLLSKTIKFSLYD----GKM-DTGH 1359
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
++LD L NL+V NS +G GTL + +++ VTA G+R+L WL RPL NS I +R
Sbjct: 1360 LILDGQTLTNLDVKVNSNTGTKEGTLLSLVDNTVTAMGRRMLENWLTRPLKNSEEINDRY 1419
Query: 707 DAVAGLRG-VNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDA-AKKQ 764
DA+ + + +P ++ R LS + D+ER L L+ S R K + ++ + +K++
Sbjct: 1420 DAIEDIMSIIEEPQSI--RDQLSNIKDLERCLHCLYRES----RKVQKEIAFDTSTSKRR 1473
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
++ ++ AL L E+ S L ++ L I ++L F++ D
Sbjct: 1474 VKPYLHALESLRAGVIIVQGLQKYAESVNSSILKRVINID-NLDEIDNVLSTFENQIDQQ 1532
Query: 825 EANNSG---RIIPHGGVDMDYDSACKKVKEIE 853
+A + G RI G + +Y+ ++V EI+
Sbjct: 1533 KALSEGIVERI--DGSLGPEYEKYLEEVAEID 1562
>gi|302814979|ref|XP_002989172.1| hypothetical protein SELMODRAFT_129323 [Selaginella moellendorffii]
gi|300143072|gb|EFJ09766.1| hypothetical protein SELMODRAFT_129323 [Selaginella moellendorffii]
Length = 932
Score = 206 bits (525), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 156/470 (33%), Positives = 235/470 (50%), Gaps = 53/470 (11%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
KF ++ P RD R D +D RT+++P + L+ +S Q+Q+W K +MD V+FFK
Sbjct: 81 KFEWMQPSNIRDGNGRNHSDPLFDVRTVHIPENVLKKMSASQRQYWTTKCHYMDIVLFFK 140
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQ 406
+GKFYEL+E+DA +G KELD + C G PE V+KL +GY++ +EQ
Sbjct: 141 VGKFYELYELDAEIGHKELDWKMTISGVGKCRQVGVPESGIEDAVQKLVARGYKIGRMEQ 200
Query: 407 TETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTE--SNQS 464
ET EQ + +R + +V+R++ VVT TLT+G + P+A +L+A+ E N
Sbjct: 201 VETSEQAKAKR----GPNAMVERKLVQVVTPSTLTDGIM---KPEAIHLLAVKEVLENSG 253
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
P++ +G D A +G D+ S L L+ ++ P E++ LSP
Sbjct: 254 PSAV----IYGFAFADAAGGLCYVGSFCDNDAYSALDALVMQIAPQEVLYEIGGLSPGAL 309
Query: 525 RAILRHTRN---PLVNDLVPLSEFWD--AETTVLEIKNIYNRITAESLNKADSNVANSQA 579
+ R+ R PLV L PL D TVLE+ I +R + K + Q
Sbjct: 310 KVFQRYIRPGSLPLV--LTPLQPGADFPEPATVLEL--ISSRGYFQECVK-----CSGQQ 360
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR--FAKFELLPCSG 637
G PG+L T D ++ALG + +L + +D + +EL
Sbjct: 361 PG-----FPGVL----DTVDHKDAAMTALGALVSHLHRIKMDAEIYNGVLCAYELY---- 407
Query: 638 FGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLY 697
+G +M LD + NLE+ N+ +G +GTL L+ C TAF KRLLR W+ PL
Sbjct: 408 WG------FMRLDGQTIANLELLANTANGGKAGTLMGYLDSCATAFAKRLLRRWICHPLQ 461
Query: 698 NSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEAN 747
++ I R D+V L N A E R L ++PD+ERL ARL S+++
Sbjct: 462 DTKAINHRLDSVEELL-CNPECAAELRALLRKVPDLERLSARLRGFSDSS 510
>gi|168029288|ref|XP_001767158.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681654|gb|EDQ68079.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 903
Score = 205 bits (521), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 156/467 (33%), Positives = 228/467 (48%), Gaps = 61/467 (13%)
Query: 286 AREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDK 344
A A KF +L P++ +DA RRP YD RTL++PPD L ++ Q+Q+W KSK+MD
Sbjct: 17 AAAAAKFEWLLPNKIKDAMGRRPDHPLYDKRTLHIPPDVLSKMTASQRQYWTAKSKYMDT 76
Query: 345 VIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHC---GFPERNFSMNVEKLARKGYRV 401
V+FFK+GKFYEL+E DA +G KE+D + C G PE V+KL +GY+V
Sbjct: 77 VLFFKVGKFYELYEFDAEIGQKEMDWKLTLSGVGKCRQVGVPESGIDDAVQKLVARGYKV 136
Query: 402 LVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
VEQ ET EQ K++G +V+R++ VVT T +G L P+A +L+AL E
Sbjct: 137 GRVEQLETSEQ----AKQRGG--GMVQRDLTHVVTPSTRLDGNL---RPEAVHLLALRED 187
Query: 462 N----QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
A G VD A + +G + DD S L LL+++ P EI+
Sbjct: 188 TLDGPHDNALSQGSVAIGFAFVDAAAGKFYVGTINDDCSRSALESLLAQVAPQEILYELG 247
Query: 518 MLSPETERAILRHTRNPLVNDLVPLS-EFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+ + P++ + PL+ EF +A A L K +
Sbjct: 248 GICCQL----------PVM--MTPLTDEFQEAN-------------FAMKLMKDKKYFRS 282
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL---RFAKFELL 633
+ GD G E + + SALG + +L + +++ LL +E+
Sbjct: 283 GGSSGD----FRGPWPEALEILTNKHLAASALGALVAHLTRMKVNDELLPNGVLLSYEVF 338
Query: 634 PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLA 693
S + LD ++ NLE+ EN G +GTL L+ CVT FGKR+LR W+
Sbjct: 339 RGS----------LRLDGQSIVNLELLENKDDGSRAGTLLDYLDKCVTKFGKRMLRRWIC 388
Query: 694 RPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
PL N+ + +R DAV L + A R+ L LPD+ERL+AR+
Sbjct: 389 HPLQNTAELNDRLDAVEELSS-REEMACLIREDLRVLPDLERLVARV 434
>gi|336110072|gb|AEI16804.1| mutS protein 6 [Stenocercus guentheri]
Length = 349
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 184/360 (51%), Gaps = 29/360 (8%)
Query: 316 TLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
TL++P D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +MKG
Sbjct: 1 TLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMKG 60
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVKREIC 432
H GFPE F L +KG++V+ VEQ ETPE +E R + D+VV RE+C
Sbjct: 61 TWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVHREVC 120
Query: 433 AVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
+++KGT T L + + L + S R +G+C VD + LGQ +
Sbjct: 121 RIISKGTQTYSILDGDFSETHHKYLLCVKEKCDDSAGLRRTYGVCFVDTTVGKFYLGQFV 180
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE--- 549
DD S LL+ PV+I+ S ET++ + + + L+ S+FW+A
Sbjct: 181 DDRHSSRFRTLLAHYTPVQILFERGNPSTETQKIMKSLLPSTVQEGLMSGSQFWNASKTL 240
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
T+LE ++ S+ + + AE D L PG SEL LSALG
Sbjct: 241 KTLLEEDYFKDKENVNSVAVLPPVIKSMTAENDSLGLTPGENSEL---------ALSALG 291
Query: 610 GTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLDAPALENL 657
+FYLKK +D+ +L AKFE + P S F +K MVLD L NL
Sbjct: 292 SCVFYLKKCIIDKEILSMAKFEEYVPVDTNIGKGIKPSSIFTKSNQK--MVLDGVTLTNL 349
>gi|156083216|ref|XP_001609092.1| DNA repair protein [Babesia bovis T2Bo]
gi|154796342|gb|EDO05524.1| DNA repair protein, putative [Babesia bovis]
Length = 1313
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 178/731 (24%), Positives = 303/731 (41%), Gaps = 130/731 (17%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
+D R+P D YDP T+++PP R + ++ +QWW K D+++FFKMG
Sbjct: 352 KDRDGRKPTDDNYDPSTIWIPPKGHRWATEYRSGHYTDCMQQWWNIKQDRFDQLLFFKMG 411
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYELF DA + + L++M E +PH GFPE++ + GY+V+VVEQTETP
Sbjct: 412 RFYELFYHDACIVQQICGLRWMGSEAKPHVGFPEKSLHIYASSCVDHGYKVVVVEQTETP 471
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QLE R +E G + V R IC ++T GT+T E+L+ + L+ +T+ ++ +T
Sbjct: 472 QQLEQRNRESGQRQNAVSRAICEIITPGTITRPEMLTKQ--SRPLLLITDVHREDMGTAT 529
Query: 471 D---------------------------------RC--------FGICVVDVATSRIILG 489
D RC F +C D + + LG
Sbjct: 530 DAKCGNDEGFTSPSHNESKTKLPSSLGRRTFELPRCLESGTGRMFCVCSFDASVGSLCLG 589
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
+ L L +++ L P E+ ++ T + + DL ++ + E
Sbjct: 590 TLDISLGMGQLRAIIAALSPAEV--------------VVDSTLSDHLEDLREMATYLGFE 635
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
T + + +T ++ D+ VA + D ++V + LG
Sbjct: 636 LTSF---DCFEDVTHATVGDKDATVAE------------------VDYTDFMNKVNATLG 674
Query: 610 GTLF-----------YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
F YLK L+ LL + +L S + D M LD L LE
Sbjct: 675 HQTFMYQRVILLVQRYLKSVMLN-NLLNYCTISILS-SNYRDC-----MTLDCAVLTQLE 727
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
+F+ S+ GD S +L+ LN AFG+R+LR WL +PL + I ER AV N
Sbjct: 728 LFK-SQEGDVSSSLFGVLNKTSCAFGERMLRQWLLKPLTCANRINERS-AVVEFFHQNFS 785
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
++ L +LPD+ER +L ++ K+ +Y D F+ ++M
Sbjct: 786 VCRAYQDQLCQLPDLERSFGKLLNAAAG----CYKMAVYFDEGI-----FLKQYTMHQMM 836
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLP--------AIVSILKHFKDAFDWVEANNSG 830
+Q +L+ G+ LP AI + H + ++ +
Sbjct: 837 EQF-----MLLQRYVKALFSDCGKTGQDLPILLQDMNKAIQDVAPHCEYFLSLLDISGPK 891
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
GV + D + + ++L K L+E R + + ++ + E E
Sbjct: 892 SCHTRSGVWQESDRVRDLINQTVSALQKELEEIRDMCPSAKFVHTKFRYEVEIQE-KEYR 950
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
R + + +E+ S++ GF R I L+ +LS E + Q ++ Q + +
Sbjct: 951 RIATAKAFEVTSTRSGFVRIHNRVIVSLVADLSDHEFALSQSELQFFQHMVKQLHDRRDV 1010
Query: 951 WRQMVAATAGL 961
+ +++ A L
Sbjct: 1011 FNKLLVIAAEL 1021
>gi|429328637|gb|AFZ80397.1| DNA mismatch repair protein, putative [Babesia equi]
Length = 1173
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/484 (31%), Positives = 228/484 (47%), Gaps = 73/484 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
+D RP D Y+P TL++PP + + +E +QWW+ K H D ++FFKMG
Sbjct: 279 KDIDGNRPTDENYNPSTLWIPPKGHKWATEFKSCHYTECMQQWWKLKQSHFDSLLFFKMG 338
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYELF DA + L++M E +PH GFPE++ GY+V+V+EQTETP
Sbjct: 339 KFYELFYHDACIIQSLCSLRWMGSETKPHVGFPEKSLHTYASTCVDAGYKVVVIEQTETP 398
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QLE R K +G+ DK VKR+IC ++T GT+T E+L ++ E ST
Sbjct: 399 QQLEQRNKTEGTSDKAVKRDICEIITPGTITRPEMLGKQSRPLVFISEDE-------DST 451
Query: 471 DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRH 530
+ +DV+ S+I G + D S L L L P E++ +++ + ++L
Sbjct: 452 GEYLALLSIDVSMSKIRYGVIRKTRDWSGLKTTLIHLCPAEVVVQKALMA---DASLLHS 508
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL-TCLPG 589
R +P EI N ESL + + + D + TC P
Sbjct: 509 IRT------LPYPP---------EITTHMNTDVQESL------LLSRLPQTDYVSTCKPV 547
Query: 590 I-LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV 648
I LSE YL+ LD+ L+ + E + + ++ M
Sbjct: 548 IFLSES-------------------YLRCILLDK-LIEYCSIEPI------EFSEVDAMN 581
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
LDA AL +LE+F S+ G +L+ LN TAFG+RLLRTWL PL N I +R +
Sbjct: 582 LDASALTHLELFL-SQEGTVQNSLFKYLNKTATAFGERLLRTWLLSPLVNIESINQRSEC 640
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
V L N F+ ++ L PD+ER L ++ ++ K V ++D +L E
Sbjct: 641 VTFLMEHNS-FSASLQQQLKAFPDLERALGKILNTA---ANYYKKAVYFDDGIFSKLHEL 696
Query: 769 ISAL 772
+ L
Sbjct: 697 HTLL 700
>gi|403351679|gb|EJY75335.1| DNA repair protein, putative [Oxytricha trifallax]
Length = 1227
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 193/743 (25%), Positives = 328/743 (44%), Gaps = 150/743 (20%)
Query: 277 MGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWW 335
M + +++ + + D FL D RDAK RRP D YD TL++P + + ++ Q+W
Sbjct: 179 MPNQAQKHTVTQDDLPIFLRKDHIRDAKMRRPSDPNYDKTTLHIPHNEWKQFTQCMVQYW 238
Query: 336 EFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKL 394
+ KS++ DK+IFFK+GKFYE+F+ DA + K LD+ +M + + H GFPE+N E L
Sbjct: 239 KIKSENFDKIIFFKLGKFYEIFDYDAEICNKLLDINFMNNQNRMHVGFPEKNKDKYAEVL 298
Query: 395 ARKGYRVLVVEQ-----TETPEQLELRRKE----KGSKDKVVKREICAVVTKGTLTEGEL 445
+ G V+VVEQ + P ++ + K + + V R+IC + ++GT T+ E
Sbjct: 299 VQNGLTVMVVEQMLENKNQAPNKVLNKNYHQNPYKKYEKECVTRDICQIYSRGTFTDIE- 357
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
A D+ Y++AL N + G+C DV+T++ LGQ DD + L +L+
Sbjct: 358 -RAQYDSKYVLALKIDNVN---------IGLCYFDVSTNKCFLGQFEDDESFNTLRTILA 407
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
++R VE+I +++ + E+ I ++P+++ D T L + + E
Sbjct: 408 QIRAVEVIAEKGLINQQIEKMIKSSPQSPILHQYR-----QDQCPTALRTVTTFEKYIQE 462
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
D +L +L DS L A G + +L+ L + L
Sbjct: 463 EKKSIDD---------------FEVLKKL--RQDSKILALQAFGIAIKFLENHLLATSCL 505
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV--------------FEN--------- 662
+ +++L A+ +M+LD+ A+E LE+ FE
Sbjct: 506 KLFRYQLFEPKSMEYSAE--FMILDSAAIEQLELIPVESTTQLQIEKKFERFNPNLQKDQ 563
Query: 663 ----SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
+ S TL+ +NH T FG RLL+ WL P
Sbjct: 564 QVILQKPNTSQATLFDFINHTKTDFGNRLLKKWLLAP----------------------- 600
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
L D++++ RL DA + +Q+ + LH E
Sbjct: 601 -----------LMDIDKINDRL------------------DAIEDLIQD-TTYLH--EFR 628
Query: 779 DQACSSLGAILENTESRQLHHILT------PGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
D S L++ +S +L +LT P +P++ +++ F+ W + + S +
Sbjct: 629 DNI--SKMPDLDSLKSYRLDKLLTIKSDQDPNGLIPSLGKLIEEFEYLIVWKKVSGSEKE 686
Query: 833 I---PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLL-----GDTSITYVTIG----KD 880
PH G+ +D KV +++ L +LK+ R+ + G IG K
Sbjct: 687 FIPEPHEGLSKQFDDTNAKVTKMKQQLDDYLKQIREQILKINEGRFKKQIDQIGFTHSKF 746
Query: 881 LYLLEVPESLR--GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
Y +EVP L P+++EL S+K GF R+ TP +K+++ EL + E E + A+ +
Sbjct: 747 RYEIEVPLELVDGNKKPKEFELTSNKNGFQRFQTPQLKEMIEELEELEEELKEAIIPFVY 806
Query: 939 RLIGQFCEHHNKWRQMVAATAGL 961
L +F ++ + W Q V A L
Sbjct: 807 ALFQRFYDNRSYWDQAVMVMAEL 829
>gi|336109990|gb|AEI16763.1| mutS protein 6 [Xantusia vigilis]
Length = 347
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 186/362 (51%), Gaps = 37/362 (10%)
Query: 318 YLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ 377
++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +MKG
Sbjct: 1 FVPEDYLKNCTPGMRKWWELKSQNFDSVIFYKVGKFYELYHMDAVVGVNKLGLGFMKGTW 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVKREICAV 434
H G PE F L +KG++V+ VEQ ETPE +E R K D+VV+RE+C +
Sbjct: 61 AHAGIPEIAFDKFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKYDRVVRREVCRI 120
Query: 435 VTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++KGT T +GEL + YL+ + E A R +GIC VD R +GQ
Sbjct: 121 ISKGTQTYNILDGEL--SETHNKYLLCIKEKFDDSA--GLHRTYGICFVDTTVGRFYVGQ 176
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE- 549
DD CS L L++ P +I+ S ET++ + + L S+FW+A
Sbjct: 177 FPDDRHCSRLRTLVAHYPPSQILFERGNPSAETQKILKGLLSCTVQEGLAAGSQFWNASK 236
Query: 550 --TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
T++E + A S + + AE D L PG SEL LSA
Sbjct: 237 TLKTLIEEGYFQGKENASSGLVLPPVIRSMTAESDSLGLTPGENSEL---------ALSA 287
Query: 608 LGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDAPALE 655
LGG +FYLKK +D+ LL AKF E +P S F +++ MVLD L
Sbjct: 288 LGGCVFYLKKCIIDQELLSLAKFEEFVPVDADIVKETQSTSVFAKTSQR--MVLDGVTLA 345
Query: 656 NL 657
NL
Sbjct: 346 NL 347
>gi|452823052|gb|EME30066.1| DNA mismatch repair protein MutS isoform 2 [Galdieria sulphuraria]
Length = 1048
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 198/698 (28%), Positives = 320/698 (45%), Gaps = 116/698 (16%)
Query: 296 GPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKH-------------- 341
D RD + R P DV YDP TLY+PP+ R LS QKQ+WE K KH
Sbjct: 116 ATDIRDEQHRLPTDVDYDPSTLYIPPEAFRQLSPFQKQFWELKRKHYGTLQFFDSHKAQK 175
Query: 342 -MDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---EQPHCGFPERNFSMNVEKLARK 397
+D V+FFK GKFYEL++ DA +G L L Y G E G PE +F+ KL
Sbjct: 176 TLDIVLFFKKGKFYELYDCDADIGHSVLGLNYTAGGRVEMRCVGVPETSFARYASKLVDN 235
Query: 398 GYRVLVVEQTETPEQLELRRKEKGSKDK---VVKREICAVVTKGTLTEGELLSANPDASY 454
GY+V VEQ ET RR+ S D V +R + ++TKG+LT E L+ +P + +
Sbjct: 236 GYKVGRVEQVETTTAAAQRRRSSDSVDSKIAVCQRSLVRIMTKGSLTVDE-LNGDPSSHF 294
Query: 455 LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIK 514
L+ + + +S G +DV+ +G++ D + L +L ++PVEII
Sbjct: 295 LLCIHQCIRSEK-------IGFFYLDVSAGYSTVGEMKHDAGLADLEAILLSVQPVEII- 346
Query: 515 PANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV 574
AI + PL L +++ + T L L S+
Sbjct: 347 -----------AINCQQKGPLSE----LLKYFTSTTNCL-------------LVHQHSSY 378
Query: 575 ANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELL- 633
SQ + P L E + + S AL G L YLK ++ +LRF +
Sbjct: 379 GYSQRGAN----FPTQLEEFLLRHSTAS---IALFGCLEYLKSLYISVEVLRFDSTVIWD 431
Query: 634 PCSGFGDMAKK------------PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
C ++K + L + NLE+ + + TL + ++H T
Sbjct: 432 KCCTNEHISKNLSNEVNWEDRCLGNLSLIGSTIFNLEIVTSRPNKIGGHTLLSFIDHTAT 491
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAV-AGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
A GKRL++ W+ PL I R D++ LR ++ L + RK LS+ PD+ER + +
Sbjct: 492 AGGKRLIKQWICTPLICRSQIERRLDSIEIILRKDSKSNILDQVRKQLSQFPDIERQIVK 551
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ + S+++V+++D+ K+++ EF+ L + +D A L +QL
Sbjct: 552 I----QNMAYCSHQIVMFDDSEKRKVLEFLKFL---KCLDHAVEFL--------KKQLPV 596
Query: 800 ILTPGKGLPAIVSILKHF--------KDAFD--WVEANNSGRIIPHGGVDMDYDSACK-K 848
IL P + +S +++F ++ D + E + R +G ++ DS K +
Sbjct: 597 ILFP--EFDSFISFIQNFDNNLLHKCRNVLDDLFNEFPDLDR-TENGEMNFSEDSTFKNE 653
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKG 906
++ IE L + L++ R+ + + I + ++ Y LE +S + ++P D+ L S
Sbjct: 654 IEGIELRLQRILEDFREQM-NIDIQWFHRFREAYQLEFSQSALEKTNIPDDFVLMSQTSD 712
Query: 907 FFRYWTPNIKKLL---GELSQAESEKESA-LKSILQRL 940
R+WTP IK+L+ EL +A + ES+ K ILQ+
Sbjct: 713 KKRFWTPEIKQLVKKRNELLEAHTISESSKFKKILQKF 750
>gi|403365718|gb|EJY82649.1| DNA repair protein, putative [Oxytricha trifallax]
Length = 1348
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 191/726 (26%), Positives = 320/726 (44%), Gaps = 150/726 (20%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
FL D RDAK RRP D YD TL++P + + ++ Q+W+ KS++ DK+IFFK+GK
Sbjct: 317 FLRKDHIRDAKMRRPSDPNYDKTTLHIPHNEWKQFTQCMVQYWKIKSENFDKIIFFKLGK 376
Query: 353 FYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQ----- 406
FYE+F+ DA + K LD+ +M + + H GFPE+N E L + G V+VVEQ
Sbjct: 377 FYEIFDYDAEICNKLLDINFMNNQNRMHVGFPEKNKDKYAEVLVQNGLTVMVVEQMLENK 436
Query: 407 TETPEQLELRRKE----KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESN 462
+ P ++ + K + + V R+IC + ++GT T+ E A D+ Y++AL N
Sbjct: 437 NQAPNKVLNKNYHQNPYKKYEKECVTRDICQIYSRGTFTDIE--RAQYDSKYVLALKIDN 494
Query: 463 QSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPE 522
+ G+C DV+T++ LGQ DD + L +L+++R VE+I +++ +
Sbjct: 495 VN---------IGLCYFDVSTNKCFLGQFEDDESFNTLRTILAQIRAVEVIAEKGLINQQ 545
Query: 523 TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
E+ I ++P+++ D T L + + E D
Sbjct: 546 IEKMIKSSPQSPILHQYR-----QDQCPTALRTVTTFEKYIQEEKKSIDD---------- 590
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
+L +L DS L A G + +L+ L + L+ +++L A
Sbjct: 591 -----FEVLKKL--RQDSKILALQAFGIAIKFLENHLLATSCLKLFRYQLFEPKSMEYSA 643
Query: 643 KKPYMVLDAPALENLEV--------------FEN-------------SRSGDSSGTLYAQ 675
+ +M+LD+ A+E LE+ FE + S TL+
Sbjct: 644 E--FMILDSAAIEQLELIPVESTTQLQIEKKFERFNPNLQKDQQVILQKPNTSQATLFDF 701
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
+NH T FG RLL+ WL P L D+++
Sbjct: 702 INHTKTDFGNRLLKKWLLAP----------------------------------LMDIDK 727
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+ RL DA + +Q+ + LH E D S L++ +S
Sbjct: 728 INDRL------------------DAIEDLIQD-TTYLH--EFRDNI--SKMPDLDSLKSY 764
Query: 796 QLHHILT------PGKGLPAIVSILKHFKDAFDWVEANNSGRII---PHGGVDMDYDSAC 846
+L +LT P +P++ +++ F+ W + + S + PH G+ +D
Sbjct: 765 RLDKLLTIKSDQDPNGLIPSLGKLIEEFEYLIVWKKVSGSEKEFIPEPHEGLSKQFDDTN 824
Query: 847 KKVKEIEASLTKHLKEQRKLL-----GDTSITYVTIG----KDLYLLEVPESLR--GSVP 895
KV +++ L +LK+ R+ + G IG K Y +EVP L P
Sbjct: 825 AKVTKMKQQLDDYLKQIREQILKINEGRFKKQIDQIGFTHSKFRYEIEVPLELVDGNKKP 884
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+++EL S+K GF R+ TP +K+++ EL + E E + A+ + L +F ++ + W Q V
Sbjct: 885 KEFELTSNKNGFQRFQTPQLKEMIEELEELEEELKEAIIPFVYALFQRFYDNRSYWDQAV 944
Query: 956 AATAGL 961
A L
Sbjct: 945 MVMAEL 950
>gi|336109976|gb|AEI16756.1| mutS protein 6 [Eugongylus rufescens]
Length = 345
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 188/366 (51%), Gaps = 40/366 (10%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P TL++P D+L+N + G ++WWE K+++ D VIF+K+GKFYEL+ MDA VG ++ L +M
Sbjct: 1 PXTLFVPEDYLKNCTPGMRKWWEIKAQNFDSVIFYKVGKFYELYHMDAVVGVNKMGLGFM 60
Query: 374 KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKRE 430
KG H GFPE F L GY+V+ VEQ ETPE +E R + D+VV+RE
Sbjct: 61 KGTWAHAGFPEILFDKRSRDLVHLGYKVVRVEQMETPEMMEARCRSMAHPTKFDRVVRRE 120
Query: 431 ICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
IC +++KGT T L + D YL+ + E R +G+C VD + +
Sbjct: 121 ICRIISKGTQTFNILDNDFVDNHNRYLLCIKEKVDDXTRLY--RTYGVCFVDTTVGKFYV 178
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
GQ DD CS L L++ PV+++ S ET++ + + + L+ S+FW+A
Sbjct: 179 GQFSDDRYCSRLRTLVAHYVPVQVLFERGNPSSETQKILKDLLSSTVQESLIAGSQFWNA 238
Query: 549 ETTVLEIKNIYNRITAESLNKADSN--VANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
T+ +I E D + + AE D L PG SEL LS
Sbjct: 239 SKTL--------KILTEEGYFQDIPPLIKSMTAESDSLGLTPGENSEL---------ALS 281
Query: 607 ALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP-----------YMVLDAPAL 654
ALGG +FYLK+ +D+ LL A F E +P ++K+P MVLD L
Sbjct: 282 ALGGCVFYLKRCIIDQELLTMANFEEYVPVD--IHISKEPESSNLFTKTXQRMVLDGVTL 339
Query: 655 ENLEVF 660
NLE+
Sbjct: 340 VNLEIL 345
>gi|449016696|dbj|BAM80098.1| mutS family DNA mismatch repair protein MSH6 [Cyanidioschyzon
merolae strain 10D]
Length = 1108
Score = 200 bits (508), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 187/680 (27%), Positives = 302/680 (44%), Gaps = 88/680 (12%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD+ R P D +YDP T+++PP+ R ++ Q Q+W+ K + D V+ FK GKFYE +++
Sbjct: 193 RDSAGRSPTDPHYDPSTVFVPPEAERKMTPFQLQFWKIKRNYYDTVLLFKKGKFYECYDI 252
Query: 360 DAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
DA +G + L L Y + + G PE F + +L GYRV VEQ E+
Sbjct: 253 DADIGHRVLQLNYTSIGRADMRCVGVPESAFYRHAIRLVDAGYRVGRVEQVESV------ 306
Query: 417 RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGI 476
K + +KV R + ++TKGT+ + + YLM + E ++ P +++ GI
Sbjct: 307 LAAKANSNKVCDRRLVKILTKGTVVDEAGDDVFEEPRYLMIVVEGDRVPGTETIP--LGI 364
Query: 477 CVVDVATSRIILGQVMDDLD-CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
C + VAT+ + LG + + + L LL +RP E+I S E ++R P
Sbjct: 365 CYLCVATAAVHLGVLHTSRERFTELEALLVRVRPREVILD---FSSERLEFLVRSCAAPD 421
Query: 536 VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELI 595
V +R T + S VA L I S+++
Sbjct: 422 VQ---------------------VHRRTLRDVPPNASLVAK----------LSAICSDVL 450
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPY---MVLDAP 652
+ L A G SFLDE L+ F L DMA + LDA
Sbjct: 451 A--------LRACQGA-----ASFLDELLIADQVFPLGNFYSLHDMAPTELYERLELDAA 497
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV--- 709
A+E LE+F S + G+++ L+ C T G+R LR WL P + I +R DA+
Sbjct: 498 AMEGLELFRTSADFNKDGSVFGFLDRCATNMGRRYLRRWLCHPFRDVARICDRLDAIEDI 557
Query: 710 ----AGLRGVNQPFALE------FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
L G N+ + E L LPD+ER L R+ A + + + V+++D
Sbjct: 558 HQMLTSLSGANEMESAEEQHQQHLFSCLRSLPDIERSLVRIHALAV----DRHGAVMFDD 613
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAIL----ENTESRQLHHILTPGKGLPA--IVSI 813
++++++F+ L G + + AI E+ + L +P I +
Sbjct: 614 TNQRKVRDFLRILDGLATAVELVGRIRAIAAQAPESHRRSRRLRWLLSDGAVPLARIEAT 673
Query: 814 LKHFKDA--FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTS 871
L F D FD A ++G + P +A + + IE L + L + R LG
Sbjct: 674 LGAFLDGQVFDADAARHTGVLRPRTDSHSLLATARCEKERIERELEEELAKVRHRLGRVP 733
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
+ + ++ Y +E+P +R ++P D+ L S K RYWTP I+ LL L++ E + E+
Sbjct: 734 VRFYHRVQERYQIELPADVR-NIPDDFVLMSQTKQHRRYWTPTIRSLLTALNRVEEDIET 792
Query: 932 ALKSILQRLIGQFCEHHNKW 951
A + + QF ++ W
Sbjct: 793 AEAQFARTVFEQFDASYSLW 812
>gi|336109956|gb|AEI16746.1| mutS protein 6 [Smaug mossambicus]
Length = 355
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 199/369 (53%), Gaps = 35/369 (9%)
Query: 316 TLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG 375
TL++P D+L N + G ++WWE KS++ D VI +K+GKFYEL+ MDA V +L L++MKG
Sbjct: 1 TLFVPEDYLXNCTPGMRKWWELKSQNFDSVICYKVGKFYELYHMDAVVAVSKLGLEFMKG 60
Query: 376 EQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREIC 432
H GFPE F L +KGY+V+ VEQ ETPE ++ R K D+VV+RE+C
Sbjct: 61 TWAHAGFPEIAFDKFSSVLIQKGYKVVRVEQVETPEMMDARCKTLAHPTKFDRVVRREVC 120
Query: 433 AVVTKGTLTEGELLSANPDAS---YLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
V++KGT T G +L A+ + YL+ + E + S R +G+C +D + +G
Sbjct: 121 RVISKGTQTYG-ILDADFSETHNKYLLCIKE--KVIDSSGLHRSYGVCFIDTTVGKFHVG 177
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
Q +DD CS L LL+ PV+I+ S ET++ + + L+ S+FW+A
Sbjct: 178 QFLDDRHCSRLRTLLAHYPPVQILFERGNPSAETQKIFKGLLPSTVQEGLIADSQFWNAS 237
Query: 550 ---TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
T+LE ++ A + + + AE D L PG SEL VLS
Sbjct: 238 RTLKTLLEEDYFQDKKNASGSHNLPPVIRSMTAESDSLGLTPGENSEL---------VLS 288
Query: 607 ALGGTLFYLKKSFLDETLLRFAKF-ELLPC-----------SGFGDMAKKPYMVLDAPAL 654
ALGG +FYL+K +D+ LL AKF E +P S F +++ MVLD L
Sbjct: 289 ALGGCVFYLRKCIIDQELLSLAKFEEYVPVDVDITKGTGSSSVFAKTSQR--MVLDGVTL 346
Query: 655 ENLEVFENS 663
NLEV +N+
Sbjct: 347 ANLEVLQNA 355
>gi|84999622|ref|XP_954532.1| DNA mismatch repair protein, MutS family [Theileria annulata]
gi|65305530|emb|CAI73855.1| DNA mismatch repair protein, MutS family, putative [Theileria
annulata]
Length = 1279
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 231/483 (47%), Gaps = 76/483 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
+DA+ RRP YD TL++PP R + +E +QWWE K H D ++FFKMG
Sbjct: 270 KDAEGRRPLAEGYDTTTLWIPPRGHRWAYEFRSGHYTECMQQWWEVKKTHFDSLVFFKMG 329
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYELF DA V L++M E +PH GFPE++ G+RV+VVEQTETP
Sbjct: 330 KFYELFYQDACVVQGLTGLRWMGAETKPHVGFPEKSIHFYASACVNAGHRVVVVEQTETP 389
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QL+ R K G+ + VKR++C ++T GT++ E+L+ +M+LT+S +QS
Sbjct: 390 QQLDKRNKALGTSARAVKRDVCDIITPGTVSAPEMLTTQSRPLLIMSLTQSQPESQTQSQ 449
Query: 471 --------------DRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
+ I +DV+ S+I G V D + +L P E++ +
Sbjct: 450 VSTAPESEPSISDGNAIVSIVCLDVSMSKIRFGTVKYTDDLLQVKTVLIHFCPAEVVLDS 509
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+ + ++ +++ + +P S + + + +N+ NR+ ++ ++ VAN
Sbjct: 510 VLFN---KKDLIKAIK------ALPYSAEITSHISQNKSRNLLNRVK----DRWEA-VAN 555
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+ +AL T YL LD+ ++ + FE
Sbjct: 556 --------------------------ECSTALLLTESYLTVVLLDK-IVEYCYFEPF--- 585
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ A+ M +D AL +LE+F ++ G +L+ LNH TAFG+RLLR WL PL
Sbjct: 586 ---NFAQLEVMSMDYSALVHLELFV-TQEGTEKNSLFHYLNHTKTAFGERLLRYWLLNPL 641
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I R +AV L N P + L R PD+ER L ++ S+ N +K +
Sbjct: 642 TDVDSINLRSEAVEFLVQ-NYPLVTTLNQELERFPDLERALGKILNSAS----NYHKRAI 696
Query: 757 YED 759
Y D
Sbjct: 697 YFD 699
>gi|167536029|ref|XP_001749687.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771835|gb|EDQ85496.1| predicted protein [Monosiga brevicollis MX1]
Length = 1131
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 211/831 (25%), Positives = 334/831 (40%), Gaps = 165/831 (19%)
Query: 179 DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLR------GRK 232
DDEE+E V+ E S ED+ +D E ++ DE + VL G +
Sbjct: 221 DDEELEAVKREES-----------------EDLDQDSESEVPDESDG-VLESEPESDGER 262
Query: 233 RKSSGVKKSKSDGNAVNADFKSPIIKPVKIFGSDKLSNGFDN------------------ 274
R ++ ++ ++ +A S K +K F + DN
Sbjct: 263 RSAAKTRRKRAPSSA------SKTQKAIKPFSPTSAHSELDNFAARTSRTPPKTVAPKSN 316
Query: 275 -PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQ 333
P+ + + A +F FL D RD+ RR+P D YDP TL++P LS +KQ
Sbjct: 317 GPLSQSEAGAGATSNAGRFRFLA-DLRDSHRRKPSDPNYDPTTLHIPTQEFEKLSPFEKQ 375
Query: 334 WWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVE 392
+W K + D ++FFK GKFYEL+E DA + +E + + G PE
Sbjct: 376 YWTIKKDNFDTILFFKKGKFYELYEQDAFIANREFQWKITERVNMSMAGVPESTMIDWAT 435
Query: 393 KLARKGYRVLVVEQTETPEQLELR-RKE-KGSKD-----KVVKREICAVVTKGTLTEGEL 445
+ G++V ++ E+ +++R RKE KG + K+++R++ + TKGTL G+
Sbjct: 436 RFLALGFKVARADERESALAMQMRQRKEAKGGQPNKKLPKIIERKLTTIYTKGTLM-GDF 494
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +SY+MA+ ES+ A +GI D AT+ + +D L +L
Sbjct: 495 VVGDL-SSYIMAIKESDDGDA-------YGIVFADTATAEFYFCNITNDQRKIQLETILV 546
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
++ P E + N S E I + + ++ L E W
Sbjct: 547 QIMPKEFVLCRNQCSKELLALIKTNVPHADLSWLDEHHEGWRP----------------- 589
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ S + D L ELIS +A GG + Y +K +D+ +L
Sbjct: 590 -------DFVKSMVDSDNYNLRQTRLEELIS----ADLTWAAFGGLVSYFQKLLVDKHVL 638
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+FE G M +V+D L+NLE+ N+ S G+L+ L H VT FGK
Sbjct: 639 PQGRFETYDPVKHGAM-----LVMDGQTLQNLEILTNNVDRTSKGSLFELLCHTVTPFGK 693
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RL R D VA L + LPD+ERLLAR+ A S
Sbjct: 694 RLFR-----------------DEVAIL--------------MKSLPDLERLLARVHAGS- 721
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA--ILENTESRQLHHILTP 803
+L++F+ L ++ A L + +L +LTP
Sbjct: 722 -----------------CKLKDFLELLDAFARLNDTAHRWVADNRLNQVTAVRLQQLLTP 764
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
GK LP + L+ K +FD +A G + P G D+D+A + + L HL++
Sbjct: 765 GKALPRLEEPLERIKASFDHEKALADGIMEPTMGALSDFDAATTTLDTLTKELDVHLQKA 824
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
+ L +VP + VP D+ L SS K F RY +P + L L
Sbjct: 825 KNRLKSN--------------KVPMADTKGVPSDWRLLSSTKNFKRYHSPEVLARLQPLL 870
Query: 924 QAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAF 974
+AE + + + + + VA A + +L H F
Sbjct: 871 EAEETQRQIRSQFYATTLCKMDSYAEVFSAAVATWAEVDCLLSLYRATHVF 921
>gi|336109998|gb|AEI16767.1| mutS protein 6 [Chamaeleo calyptratus]
Length = 339
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 182/353 (51%), Gaps = 35/353 (9%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSM 389
G ++WWE KS++ D VIF+K+GKFYEL+ MDA G +L L +MKG H GFPE F
Sbjct: 1 GMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVTGVNKLGLVFMKGTWAHSGFPEIAFDR 60
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLT----E 442
L KG++V+ VEQ ETPE +E R K D+VV RE+C +++KGT T +
Sbjct: 61 FANILVEKGHKVVRVEQVETPEMMEARCKSLAHPTRFDRVVHREVCRIISKGTQTYSILD 120
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
GE + YL+ + E P T +G+C VD + +GQ +DD CS L
Sbjct: 121 GEF--SETHNKYLLCIKEKAADPTGLHT---YGVCFVDTTVGKFYVGQFLDDRHCSRLRT 175
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIY 559
LL+ PV+I+ S ET++ +L+ + L+ S+FW+A T ++E
Sbjct: 176 LLAHYTPVQILFERGNPSVETQK-VLKGLLSTAQECLIAGSQFWNASKTLKHLIEDDYFQ 234
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++ A S + + AE D L PG SEL LSALGG ++YL++
Sbjct: 235 DKEHARSRLALPPVIRSMTAESDSLGLTPGENSEL---------ALSALGGCIYYLRRCI 285
Query: 620 LDETLLRFAKF-ELLPCS---GFGDMAKKPY------MVLDAPALENLEVFEN 662
+D +L AKF E +P G G + + MVLD L NLE+ +N
Sbjct: 286 IDREILSLAKFEEYIPVDVDIGKGIKSSCIFAKTSQRMVLDGVTLANLEILKN 338
>gi|336110056|gb|AEI16796.1| mutS protein 6 [Oplurus cyclurus]
Length = 343
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 179/357 (50%), Gaps = 35/357 (9%)
Query: 322 DFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCG 381
D+LRN + G ++WWE KS+H D VIF+K+GKFYEL+ MDA VG +L L +MKG H G
Sbjct: 1 DYLRNCTAGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMKGTWAHSG 60
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVKREICAVVTKG 438
FPE F L +KG++V+ VEQ ETPE +E R + D+VV RE+C +++KG
Sbjct: 61 FPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCRSMSHPTKYDRVVLREVCRIISKG 120
Query: 439 TLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
T T L + YL+++ E + S R +G+C VD + LG+ +DD
Sbjct: 121 TQTYSILDGDFSETHNKYLLSIKE--KCDDSAGLQRTYGVCFVDTTVGKFYLGEFLDDRH 178
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S LL+ PV+++ S ET++ + + + L S+FW+A T +K
Sbjct: 179 SSRFRTLLAHYTPVQVLFERGNPSTETQKILKSLLPSAVHEGLAAGSQFWNASKT---LK 235
Query: 557 NIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
+ + A+S V + AE D L PG EL LSALGG
Sbjct: 236 TLIEEGYFQDKENANSGVVLPPVIKSMTAESDSLGLTPGENHEL---------ALSALGG 286
Query: 611 TLFYLKKSFLDETLLRFAKF-ELLPC---------SGFGDMAKKPYMVLDAPALENL 657
++YLKK +D +L AKF E +P SG MVLD L NL
Sbjct: 287 CVYYLKKCIIDREILSMAKFEEYVPVDSDVGKGIKSGSIFTKTNQRMVLDGVTLANL 343
>gi|403220570|dbj|BAM38703.1| uncharacterized protein TOT_010001218 [Theileria orientalis strain
Shintoku]
Length = 1014
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 175/705 (24%), Positives = 305/705 (43%), Gaps = 115/705 (16%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RDA R+P + Y T+++PP R + +E +QWW K H D ++FFKMG
Sbjct: 81 RDADGRKPTEEDYKVNTMWIPPKNHRWAYEFRSGHYTECMQQWWNIKQNHFDSLVFFKMG 140
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYELF DA + ++L++M E +PH GFPE++ + GY+V+VVEQTETP
Sbjct: 141 RFYELFYHDACILQSLVNLRWMGSETKPHVGFPEKSIHTYAKACVNSGYKVVVVEQTETP 200
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQST 470
+QLE R KE GS +K VKR++C ++T GT+T E+L L++ N+
Sbjct: 201 QQLEKRNKESGSYNKAVKRDVCEIITAGTVTRPEMLDRQSRPLVLVSKEGENR------- 253
Query: 471 DRCFGICVVDVATSRIILGQVMD------------DLDCSVLCCLLSELRPVEIIKPANM 518
+ +DV+ S++ G + + + S L +L L P E++
Sbjct: 254 ---MAVIAIDVSMSKMRFGSLKEQNQRKQQQFGQWNEQFSQLRTILMHLCPAEVV----- 305
Query: 519 LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ 578
+R ++++ + ++P + + + K++Y ++
Sbjct: 306 ----LDRELVKNQELAKMIKVLPYAPEVTSNNGESQHKSLYEKV---------------- 345
Query: 579 AEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
L+ G + AL YLK +D+ L + E L S
Sbjct: 346 ---------------LLEYPVEGRECKEALKLAESYLKVILMDK-LAEYCYVEPLQVS-- 387
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
+ M +D AL +LE+F ++ G + +L+ +N+ T+FG+R+LRTWL PL N
Sbjct: 388 ----EMEVMNMDYSALTHLELF-YTQEGTTKNSLFDYMNNTATSFGERMLRTWLLNPLTN 442
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYE 758
+ I R + VA L N ++ L + PD+ER L ++ A K V ++
Sbjct: 443 AEAIERRSECVAFLFD-NYALVTTIKQDLDKFPDLERSLGKVL---NAASNLHKKAVYFD 498
Query: 759 DAAKKQLQEFISALHGCELMDQACSSL---GAILENTESRQLHHILTPGKGLP--AIVSI 813
+ +L E + L + ++ + N G G P +++
Sbjct: 499 EGVFSKLYELYTMLDRFKKLEDVVLYFLNEAVKMFNAPGLARSQAGAEGSGCPKSKLLAT 558
Query: 814 LK-----------HFKDAFDWVEANNS-GRIIPHG-GVDMDYDSACKKVKEIEASLTKHL 860
++ ++K + E R P V + D K+ E+ A + +H
Sbjct: 559 MRENYTSCSQDIFNYKSMLTFTEDRKCRSRSWPRSLAVQKEIDKVVSKLNEVLAQI-QH- 616
Query: 861 KEQRKLLGDTSITYVTIGKDLYLLEVPES----LRGSVPRDYELRSSKKGFFRYWTPNIK 916
S T+V K Y +E+ E+ S E+ S+K GF R I
Sbjct: 617 -------SAPSATFVNC-KFRYEVEMTETEFHRYNRSTGNTMEITSTKSGFIRARNERIL 668
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
+L+ EL +AE + + + + Q ++ +F ++ K+ +++ A L
Sbjct: 669 ELIDELEEAEFKLKESEEEFYQHIVSEFHKNSYKFCKLIETAAAL 713
>gi|336110040|gb|AEI16788.1| mutS protein 6 [Crotaphytus collaris]
Length = 331
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 166/321 (51%), Gaps = 25/321 (7%)
Query: 322 DFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCG 381
D+LRN + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +MKG H G
Sbjct: 2 DYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNQLGLVFMKGTWAHSG 61
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVKREICAVVTKG 438
FPE F L +KGY+V+ VEQ ETPE +E R + D+VV RE+C +++KG
Sbjct: 62 FPEIAFDRFSNILVQKGYKVVRVEQMETPEMMEARCRSMSHPTKYDRVVHREVCRIISKG 121
Query: 439 TLTEGELLS--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
T T L S YL+ + E A +G+C VD + LGQ +DD
Sbjct: 122 TQTYSILDSDFTETHNKYLLCIKEKCDDSAGLHCT--YGVCFVDTTVGKFYLGQFLDDRH 179
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S LL+ PV+I+ S ET++ + + + L S+FW+A T +K
Sbjct: 180 HSRFRTLLAHYTPVQILFERGNPSTETQKILKSLLPSAVQEGLAAGSQFWNASKT---LK 236
Query: 557 NIYNRITAESLNKADSNVA------NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
+ + A+S V + AE D L PG SEL LSALG
Sbjct: 237 TLIEEGYFQDKENANSGVVLPPVIRSMTAESDSLGLTPGENSEL---------ALSALGC 287
Query: 611 TLFYLKKSFLDETLLRFAKFE 631
+FYLKK +D+ +L A+FE
Sbjct: 288 CVFYLKKCIIDKEILSMARFE 308
>gi|71032141|ref|XP_765712.1| DNA repair protein [Theileria parva strain Muguga]
gi|68352669|gb|EAN33429.1| DNA repair protein, putative [Theileria parva]
Length = 1160
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/479 (30%), Positives = 224/479 (46%), Gaps = 73/479 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD++ R+P YD TL++PP R + +E +QWW+ K H D ++FFKMG
Sbjct: 203 RDSEGRKPLGDGYDSSTLWIPPKGHRWAHEFRSGHYTECMQQWWDVKRTHFDSLVFFKMG 262
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
KFYELF DA + L++M E +PH GFPE++ GYRV+VVEQTETP
Sbjct: 263 KFYELFYQDACILQGLTGLRWMGAETKPHVGFPEKSIHSYASACVNAGYRVVVVEQTETP 322
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP----- 465
+QL+ R K G+ + VKR++C ++T GT+ E+L++ +M+ T+S P
Sbjct: 323 QQLDKRNKASGTTARAVKRDVCDIITPGTVAAPEMLTSQSRPLLIMSGTKSETQPQPAPS 382
Query: 466 ----ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANML-S 520
T I +DV+ S+I G V D + +L P E++ + + +
Sbjct: 383 ESEETKSETPSAVEIVCLDVSMSKIRFGTVKYTDDLLQVKTVLIHFCPAEVVLDSVLYDN 442
Query: 521 PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAE 580
E +AI + V VP + + KN+ N++ +K +S
Sbjct: 443 KELVKAIKALPYSADVTLHVPQN----------KSKNLLNKVK----DKWESE------- 481
Query: 581 GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGD 640
S+ ++L T YL L++ L+ + FE +
Sbjct: 482 --------------------ASECSTSLTLTESYLSLVLLNK-LVDYCYFEPF------N 514
Query: 641 MAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSG 700
++ M +D AL +LE+F ++ G +L+ LNH TAFG+RLLR WL PL +
Sbjct: 515 FSQLEVMGMDYSALVHLELFV-TQEGTEKNSLFHYLNHTKTAFGERLLRYWLLNPLTDVD 573
Query: 701 LIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYED 759
I R +AV L N P + L R PD+ER L ++ ++ N +K +Y D
Sbjct: 574 AINLRSEAVEFLVH-NYPLVTTLNQELERFPDLERSLGKILNTAS----NYHKRAVYFD 627
>gi|336109946|gb|AEI16741.1| mutS protein 6 [Aspidites melanocephalus]
Length = 324
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 160/310 (51%), Gaps = 19/310 (6%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSM 389
G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L +MKG H GFPE F
Sbjct: 3 GMRKWWEXKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLVFMKGSWAHSGFPEIAFDR 62
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELL 446
L +KG++V+ VEQ ETPE +E R K D+VV+RE+C +++KGT T L
Sbjct: 63 FSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTRFDRVVRREVCRIISKGTQTYSILD 122
Query: 447 S--ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
+ YL+ + E A R +G+C VD + +GQ +DD CS LL
Sbjct: 123 GDYSETHNKYLLCIKEKIDDSA--GLHRTYGVCFVDTTVGKFYVGQFLDDRHCSRFRTLL 180
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE---TTVLEIKNIYNR 561
+ PV+I+ S ET++ + + L P S+FW+A T++E N+
Sbjct: 181 AHYTPVQILFERGNPSAETQKILKGLISFTVQESLTPGSQFWNASKTLKTLIEEGYFQNK 240
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
S + AE D L P SEL VLSALGG +FYLKK +D
Sbjct: 241 ENTNSGLTLPPVIRFMTAESDSLGLTPAENSEL---------VLSALGGCVFYLKKCIID 291
Query: 622 ETLLRFAKFE 631
+ LL FE
Sbjct: 292 KELLSMVNFE 301
>gi|431912701|gb|ELK14719.1| DNA mismatch repair protein Msh6 [Pteropus alecto]
Length = 1172
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 230/469 (49%), Gaps = 79/469 (16%)
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNV-----ANSQA 579
R + +++ V L+P S+FWDA T+ + + E LN+ + + + +
Sbjct: 455 RKMAHISKHDKVEGLIPGSQFWDAAKTLRTL--LEEGYFTEKLNEGNGVMLPQVLKSMTS 512
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE-------- 631
E D L PG SEL LSALGG +FYLKK +D+ LL A FE
Sbjct: 513 ESDSLGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSD 563
Query: 632 ----LLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
+ P + F + ++ MVLD+ L NLE+F N +G +
Sbjct: 564 MVSAIRPGAVFAKVNQR--MVLDSVTLNNLEIFLNGTNGTT------------------- 602
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEA 746
+DA+ L V + E L +LPD+ERLL+++ S
Sbjct: 603 ------------------EDAIEDLMVVPDKIS-EVVDLLKKLPDLERLLSKIHNVGSPL 643
Query: 747 NGRNS--NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+N ++ ++YE+ +KK++ +F+SAL G +++ + + ++++ +S+ L I+T
Sbjct: 644 KSQNHPDSRAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVVDDFKSKILKQIVT 703
Query: 803 -----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
P P + L + AFD +A +G I P G D DYD A ++E E SL
Sbjct: 704 MQTKNPEGHFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLL 763
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIK 916
++L++QR +G SI Y IG++ Y LE+PE+ + ++P +YEL+S+KKG RYWT I+
Sbjct: 764 EYLEKQRSRIGCRSIVYWGIGRNRYQLEIPENFITHNLPEEYELKSTKKGCKRYWTKTIE 823
Query: 917 KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
K L L AE ++ +LK ++RL F +++ W+ V L ++L
Sbjct: 824 KKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECITVLDVLL 872
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 80/118 (67%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+
Sbjct: 336 RRDMHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYH 395
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
MDA VG EL L +MKG H GFPE F + L +KGY+V VEQTETPE +E R
Sbjct: 396 MDALVGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEAR 453
>gi|336109958|gb|AEI16747.1| mutS protein 6 [Cylindrophis ruffus]
Length = 325
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 156/305 (51%), Gaps = 15/305 (4%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVE 392
+WWE KS + D VIF+K+GKFYEL+ MDA VG +L L +MKG H GFPE F
Sbjct: 1 KWWELKSXNFDAVIFYKVGKFYELYHMDAVVGVNKLGLVFMKGTWAHSGFPEIAFDRFSN 60
Query: 393 KLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLSAN 449
L +KG++V+ VEQ ETPE +E R K D+VV+RE+C ++++GT T L
Sbjct: 61 ILVQKGHKVVRVEQMETPEMMEARCKSLAHPTRFDRVVRREVCRIISRGTQTYSILDGDY 120
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+ L + S R +G+C VD + +GQ DD CS LL+ P
Sbjct: 121 SETHNKYLLCIKKKIDDSAGLHRIYGVCFVDTTVGKFYIGQFQDDRHCSRFRTLLAHYTP 180
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE---TTVLEIKNIYNRITAES 566
V+II S ET++ + + L P S+FW+A T++E N+ +
Sbjct: 181 VQIIFERGNPSAETQKILKGLISFTVQESLTPGSQFWNASKTLKTLIEEDYFQNKEDTNN 240
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+ + + + AE D L P SEL VLSALG +FYLKK +D+ LL
Sbjct: 241 RHTLPAVIRSMTAESDSLGLTPAENSEL---------VLSALGSCVFYLKKCIIDKELLS 291
Query: 627 FAKFE 631
A FE
Sbjct: 292 MANFE 296
>gi|118355604|ref|XP_001011061.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89292828|gb|EAR90816.1| MutS domain III family protein [Tetrahymena thermophila SB210]
gi|117556985|gb|ABK35678.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1257
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 191/753 (25%), Positives = 330/753 (43%), Gaps = 114/753 (15%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D K + G YDP TL++ L+ +++W KS H DK++ K+G+FYE +
Sbjct: 286 KDKKGNKIGSENYDPTTLFIEESQLKIFKPYMREYWRIKSDHYDKIVLIKLGRFYEAYYE 345
Query: 360 DAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
D+ V + L +Y + + CGFPE + KL +V++V+Q ET +Q + R K+
Sbjct: 346 DSFVCNQILQPKYSRKNK--CGFPEEILYPYLSKLTECNLKVVIVDQLETEKQQKERIKQ 403
Query: 420 KGS-------KDKVVKREICAVVTKGT----LTEGELLSANPDASYLMALTESNQSPASQ 468
S +DK++ R++ A+ TKGT L G L + ++Y++++ QS + +
Sbjct: 404 MKSQNIKLTERDKLMNRDVVAIYTKGTAALQLVRGRKLQLST-STYILSIVTEKQSFSKK 462
Query: 469 STDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL 528
T FG+ + D T +I+L DD S ++ RP EII E+ R +
Sbjct: 463 IT---FGLTLFDSITGKILLACFEDDNIYSTFQKIIYVYRPSEIIYRKQTTDIESLRLLS 519
Query: 529 RHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP 588
+ PL L E T+ + +N I A+ D P
Sbjct: 520 QLPTKPLTTQL--------NEETIWKPTYAFNHI------------ADIFGSDDIQNMWP 559
Query: 589 GILSELISTGDSGSQVL--SALGGTLFYLKKSFL-DETL-------------LRFAKFEL 632
L + ++ S L SAL ++Y+K + L DET+ + +EL
Sbjct: 560 KCLYFYSRSEENPSYQLTYSALSALMYYMKSNLLFDETIPIANFIRIDHENNREISDYEL 619
Query: 633 LPCSG-----FGDMAKKPYM------------------VLDAPALENLEVFENSRSGDSS 669
+ G+ +M ++D+ L NL++ E S S
Sbjct: 620 KESNCDYKIEEGEQINSLHMEQEDVQKQEDNNYEDKRLIMDSQTLSNLDILEVSYGNKES 679
Query: 670 GTLYAQ------LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
L Q L+ T G+RL++ W+A PL + I +R DA+ L+ N +F
Sbjct: 680 NFLLKQYSLLQLLDRTCTKPGERLIKLWVASPLIDKQQIEQRLDAIEDLQNHN-LLRDQF 738
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
R LS L D+E +L+RL++ +N ++ V +ED ++++L+E + + +
Sbjct: 739 RDKLSNLSDLENILSRLYS---YRVKNKSRGVYFEDVSQQRLRELKNFFEDIKQILITIK 795
Query: 784 SLGAILENT-ESRQLHHILTPGKG--------------LPAIVSILKHFKDAFDWVEANN 828
+ NT +S++L ++ K L I+SI K W+
Sbjct: 796 DTFFLESNTFKSKRLKMLVGGNKKDENYNPNDNLHDICLRKILSIEKKIL----WI---G 848
Query: 829 SGRIIPH--GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV 886
S + IP G+ YD+ K++++ E + ++K+ RK GD I + K Y LE+
Sbjct: 849 SKKHIPTPVPGICEAYDNKLKEIEDHENEFSNYIKKIRKQFGDDRIQFCH-SKAPYQLEI 907
Query: 887 P-ESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
P E ++G P D+EL S K R+ TP +K+L+ + + + + L + +F
Sbjct: 908 PIELVKGDKKPADFELTSITKKTQRFHTPQLKQLINKQLLLQDQLKQFLGDFTCVIFDEF 967
Query: 945 CEHHNKWRQMVAATAGL-TLILLDGSLLHAFLI 976
++ N W Q+V A + LI L H ++
Sbjct: 968 FKYRNNWNQIVNVIAEIDCLISLSQVSFHETMV 1000
>gi|323454910|gb|EGB10779.1| hypothetical protein AURANDRAFT_71064 [Aureococcus anophagefferens]
Length = 1140
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 154/286 (53%), Gaps = 33/286 (11%)
Query: 292 FHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFL----RNLSEGQKQWWEFKSKHMDKVIF 347
+ F G DRRDA RPGD +D RTL +P D + LSE Q+QWW KS H D ++F
Sbjct: 285 YAFAGADRRDAAGLRPGDAGFDCRTLKVPKDCAVYRGKGLSEVQRQWWAVKSTHFDCLLF 344
Query: 348 FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
FK+GKFYE++ MDA VG ++ L YMKGEQ H GFPE + VE L KG++V VEQT
Sbjct: 345 FKIGKFYEMYHMDADVGVRDGGLVYMKGEQAHSGFPELAYGKYVEALVAKGHKVARVEQT 404
Query: 408 ETPEQLEL---RRKEKGSK----DKVVKREICAVVTKGTLT----------EGELLSANP 450
ETP+ +L R K+KG K +K ++RE+C+VVT GT T +G
Sbjct: 405 ETPDGTKLRVERLKKKGRKPSSAEKTMRREVCSVVTPGTRTYSVLDMRLEKDGGGFEPVA 464
Query: 451 DASYLMALTESNQSPASQSTDRCF--GICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
+ L A+ E + D F G+CV D T L Q DD + L LL++
Sbjct: 465 GPTLLAAVRE-------REVDGVFTYGVCVCDAPTGTFTLAQFEDDAMRTRLRTLLADKA 517
Query: 509 PVEI-IKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
E+ ++ A S + ++R + V L P +EFW A+ TVL
Sbjct: 518 CAEVLVERAAAASDLVD--VVRRSTTAAVESLAPGAEFWGADKTVL 561
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 147/333 (44%), Gaps = 36/333 (10%)
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
V ++ + +G+L+ ++HC T FG+RLLR WLARPL ++ + +R DAVA L ++
Sbjct: 560 VLGSAAADGRAGSLWQLVDHCKTPFGRRLLREWLARPLVDARDVADRTDAVAELV-EDRA 618
Query: 719 FALEFRKALSRLPDMERLLARLFA------------SSEANGRNSNKVVLYE----DAAK 762
A R L+RLPD+ERLL +L + + VL++ DA K
Sbjct: 619 LADALRSKLARLPDLERLLQQLHTLGAARRAVAAGDDDDLAQHPDARAVLFDAKKFDARK 678
Query: 763 -KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP---GKGLPAIVSILKHFK 818
KQL + + AL C + + +L L P G P + + L F
Sbjct: 679 VKQLADALQALGRCAALAEGADVTAPLLAA--------CLGPAGAGGCFPDLNAKLAAF- 729
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
D+FD EA +G + GVD YD+A L LK+ ++ + Y T
Sbjct: 730 DSFDLAEAKRTGELAAVRGVDDAYDAALDDKAARVRDLDDWLKDAKREHRCPDLKYKTSA 789
Query: 879 KDLYLLEVPESLRG------SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
KD Y +EVPE +P + R+ K + P++ +L+ L AE +A
Sbjct: 790 KDRYCVEVPEQFFARDRAFEHLPAGWTQRTKTKKCRSFLAPDVAELVEALEDAEKRAAAA 849
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
++ L F + ++W VA L +L
Sbjct: 850 KVDQMRSLFAAFDKERDRWAAAVACVGTLDALL 882
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 87 TPSPPPSTPAAAKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDEL 146
TP P P G +V+ KR++V+WP D AWY G V S H V+YDDG+ E
Sbjct: 29 TPKPAKVRP------GSEVVGKRLKVWWPADGAWYAGRVASLTAGGATHEVRYDDGDVEA 82
Query: 147 LDLGKEKIEWVQESVS 162
+DL EK EW+ + S
Sbjct: 83 VDLAVEKYEWLADEAS 98
>gi|145547527|ref|XP_001459445.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427270|emb|CAK92048.1| unnamed protein product [Paramecium tetraurelia]
Length = 1084
Score = 183 bits (465), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 181/713 (25%), Positives = 313/713 (43%), Gaps = 76/713 (10%)
Query: 294 FLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGK 352
FL P+ RD+K RRP + Y+P TLY+ LS KQ+W K + + + FF+ G
Sbjct: 119 FLQPENIRDSKGRRPNEPNYNPSTLYISNYEYEKLSPIFKQYWNVKKNNFEFIAFFRCGS 178
Query: 353 FYELFEMDAHVGAKELD--LQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+ + DA V A+ + L + + P + + L KGY++++++Q E
Sbjct: 179 WIAVLYNDAIVIAQMFNRYLGFWGKDTPCLTIYDNQLPIYQRALLEKGYKIMMIDQQEFS 238
Query: 411 EQLELRRKEKGSKDKVVKREICAVVTKGTLTE-GELLSANPDASYLMALTESNQSPASQS 469
++ KE G ++++REI ++T+GTL E G+ + + + L+ L SN S+
Sbjct: 239 DK---TNKEDG---EIIRREITQMITRGTLQELGD--TDSYEQRNLLVLVFSNAPANSKG 290
Query: 470 TDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
+G+ +VD T++ Q DD + L ++ +PVE+I + + E ER I
Sbjct: 291 HSYIYGVSIVDCTTNQFSFDQFYDDAQSNHLKSVIYNTKPVEVILCS--IPYEIERIIKN 348
Query: 530 HTRNPLVNDLVPLSE----FWDAETTVLEIKNI--------------------------Y 559
+V +P S+ F + LE+ N
Sbjct: 349 ICHPTVVISQLPFSDCQFIFHQLKIEYLELHNKQTNHKSKQLDDLALPVQKNQSEQKMNI 408
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ------------VLSA 607
N+I+ + + + + N Q D T L + ++ S +Q VL +
Sbjct: 409 NQISKQEI-REEQCAENYQLSQDYPTLLIELETQFNHEKKSSNQEDNESNFYSYYYVLQS 467
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE-NSRSG 666
L YL++ + ++ R KF L +M + ++ LDA LE+LE+F+ N ++
Sbjct: 468 FYILLSYLRQLLISNSVYRRGKFNFLD----SNMIRSAHLYLDAQTLESLEIFDVNLKTK 523
Query: 667 -DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
+S +L++ L+ C T GKRLL W+ PL N I ERQ V L P EF+K
Sbjct: 524 VTNSDSLFSYLDRCSTYPGKRLLTKWVQSPLQNYNSIIERQQCVKELCNF-LPQCYEFQK 582
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
+S LPD+ER + R F N +S+K+ K +L+E + L +A
Sbjct: 583 KISSLPDLERAIIRCF-----NTIHSHKLKAVPSCGKTKLKEIKNVLSNVRQAAEAFKIF 637
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
N +S++L I + + L + + +E N P G +YD
Sbjct: 638 DQDNNNFKSQKLQDIFNYKQNTQILKQSLNELEKCLN-MEDNEPK---PIQGASSEYDET 693
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
K+ +I SL L++ + L I Y K Y +++PE+ + + EL + K
Sbjct: 694 LTKITDITDSLQDELEKWKSKLKCPDIIYYH-SKIRYQMQIPENQLSNKQKHKELIITSK 752
Query: 906 G--FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVA 956
+ R+ TP I++ L +L AE E L + +F + ++ Q+++
Sbjct: 753 TPEYERFQTPFIEEQLHQLKLAEHELSQKLLPFINEYFTKFYSYRKEFLQLIS 805
>gi|336109984|gb|AEI16760.1| mutS protein 6 [Trachyboa boulengeri]
Length = 329
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 172/342 (50%), Gaps = 33/342 (9%)
Query: 342 MDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRV 401
D VIF+K+GKFYEL+ MDA VG +L L +MKG H GFPE F L +KG++V
Sbjct: 1 FDAVIFYKVGKFYELYHMDAVVGVNKLGLVFMKGTWAHSGFPEIAFDRFSNILVQKGHKV 60
Query: 402 LVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLTEGELLS--ANPDASYLM 456
+ VEQ ETPE +E R K D+VV+RE+C +++KGT T L + YLM
Sbjct: 61 VRVEQMETPEMMEARCKSLAYPTRFDRVVRREVCRIISKGTQTYNILDGDYSETHNKYLM 120
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
+ E A R +GIC VD + +GQ +DD CS LL+ PV+I+
Sbjct: 121 CIKEKIDDSA--GLHRTYGICFVDTTVGKFYVGQFLDDRHCSRFRTLLAHYTPVQILFER 178
Query: 517 NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT---VLEIKNIYNRITAESLNKADSN 573
LS ET++ + T + + L P S+FW+A T ++E N+ S
Sbjct: 179 GNLSAETQKILKGLTSSTVQESLTPGSQFWNASKTLKSLIEEGYFQNKDNTNSGFVLPPV 238
Query: 574 VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF-EL 632
+ + AE D L P SEL VLSALG +FYLK+ +D+ LL A F E
Sbjct: 239 IRSMTAESDSLGLTPAENSEL---------VLSALGSCVFYLKRCIIDKELLSMANFEEY 289
Query: 633 LP-----------CSGFGDMAKKPYMVLDAPALENLEVFENS 663
+P S F ++ MVLD L NLE+ +N+
Sbjct: 290 IPVDVDIINKTKSVSVFHKTNQR--MVLDGVTLANLEILQNA 329
>gi|449686518|ref|XP_002161963.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial [Hydra
magnipapillata]
Length = 543
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 130/224 (58%), Gaps = 22/224 (9%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRN--LSEGQKQWWEFKSKHMDKVIFFKMGKFYEL 356
R D ++ D YD RTLY+P +L++ +S G KQWW K D VIFFK+GKFYEL
Sbjct: 53 RMDKNKKLHTDPDYDKRTLYVPDSYLQSKEMSPGMKQWWLLKKDLFDTVIFFKVGKFYEL 112
Query: 357 FEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELR 416
+ MDA +G EL L +MKG+ HCGFPE F E L ++GY+V VEQTETP+ + R
Sbjct: 113 YHMDAVIGVAELGLVFMKGKFAHCGFPEVAFGRYSEVLVQRGYKVARVEQTETPQAMNER 172
Query: 417 RKEKGSKDKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTDR 472
KVV+RE+CAV++KGT T EG S ++L+A TE P S+
Sbjct: 173 SA------KVVRREVCAVISKGTRTFSFIEGH--SEESSTAFLLAFTE---RPCDTSSPG 221
Query: 473 C-----FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
C FG+C VD +T++ LGQ DD CS ++S+ P +
Sbjct: 222 CLGGSEFGVCFVDTSTAKFYLGQFTDDRQCSRFLTMISQYPPAQ 265
Score = 96.7 bits (239), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 120/251 (47%), Gaps = 25/251 (9%)
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKP---YMVLDAPALENLEVF 660
+SALGG +YLKK +D LL +F E +P K YMVLD L NLE+
Sbjct: 295 ISALGGCTWYLKKCCIDHELLSMHQFQEYVPMDQNVTTTKDSLPQYMVLDGITLTNLEIT 354
Query: 661 ENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA 720
NS G+++GTL L+ CVT FGKR W+ PL I R DAV L + +
Sbjct: 355 VNS-DGNTNGTLLQLLDQCVTMFGKRTFMQWICSPLCGKAAIDNRLDAVEDLMSIPSLIS 413
Query: 721 LEFRKALSRLPDMERLLARLFASSEANGRNS-----NKVVLYED--AAKKQLQEFISALH 773
E R + +PD+ER+L R+ S + R S ++ + Y D +KK++ + ++AL
Sbjct: 414 -EARTVMKSIPDLERILRRV--HSLGSLRRSKEHPDSRAIFYNDEIYSKKKIGDLLAALD 470
Query: 774 G-------CELMDQACSSLGAILENTESRQLHHILTP---GKGLPAIVSILKHFKDAFDW 823
G +L + ++ + + + LT GL +L + +AFD
Sbjct: 471 GFKKAEQVIDLFQKQLTNFNVVAVGLTNSVVAVSLTDSVVAVGLKNSAVLLMNSANAFDH 530
Query: 824 VEANNSGRIIP 834
+A ++G I P
Sbjct: 531 KKAKDTGLIHP 541
>gi|384252001|gb|EIE25478.1| hypothetical protein COCSUDRAFT_40713 [Coccomyxa subellipsoidea
C-169]
Length = 874
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 209/438 (47%), Gaps = 63/438 (14%)
Query: 311 YYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL 370
Y + + + PP E QKQ+W KS + D +IFFK+GKFYEL+E DA +GA+ L
Sbjct: 9 YQEIQFWWCPP-------ESQKQYWTVKSSYRDTIIFFKVGKFYELYEDDAEIGAQVLGW 61
Query: 371 QYMKGEQPHC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVV 427
+ HC G PE V +L GY+V +EQ ET ++ + R K + +
Sbjct: 62 RMTVTGVGHCRQVGCPESGVEEAVSRLVSAGYKVARMEQMETAQEAKAARGPKAT----I 117
Query: 428 KREICAVVTKGTLTEGELLSANPDASYLMALTES---NQSPASQSTDRCFGICVVDVATS 484
+R++ V T T T + + DA +LMAL E+ N + +SQ + F +D A
Sbjct: 118 RRQLTRVHTPATATG----NVSVDAVHLMALHEAPIQNHATSSQDSRVTFSFAFLDAAAG 173
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
R +G DD S L LL+++ P E++ N LS T+RA+ + V + V +E
Sbjct: 174 RFYVGVADDDAGRSTLGALLTQVAPRELLVRRNALSSTTQRALSTPSVAMEVTN-VTGAE 232
Query: 545 F--WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
F DA + +++++N + N QA G G
Sbjct: 233 FPDPDAIASASSLESMFNGLIVPH---------NIQAMGAG------------------- 264
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
L+AL YLK++ ++ L A+ +++ + + LD P L NLE+ EN
Sbjct: 265 -ALTALSALCLYLKRAKANDELATHAQ-KVVSYETYAGA-----LCLDGPTLTNLELLEN 317
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FAL 721
+ G + G+L AQL+ C + G+RLLR WL RPL + G I +R DA + V +P
Sbjct: 318 TEGG-TEGSLLAQLDTCASPGGRRLLRQWLCRPLLDVGAIEQRLDAADEI--VKRPDLVT 374
Query: 722 EFRKALSRLPDMERLLAR 739
L +PD+ER L R
Sbjct: 375 SLLATLRSMPDLERALGR 392
>gi|336109982|gb|AEI16759.1| mutS protein 6 [Sphenodon punctatus]
Length = 283
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 159/295 (53%), Gaps = 21/295 (7%)
Query: 336 EFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLA 395
E KS++ D VIF+K+GKFYEL+ MDA G EL L +MKG H GFPE F + L
Sbjct: 1 ELKSQNFDCVIFYKVGKFYELYHMDAVTGVSELGLVFMKGTWAHSGFPEIAFGRFSDVLV 60
Query: 396 RKGYRVLVVEQTETPEQLELRRKEKGS---KDKVVKREICAVVTKGTLTEGELLSANPDA 452
+KG++V+ VEQTETPE +E R K D+VV+RE+C ++TKGT T +L +P
Sbjct: 61 QKGHKVVRVEQTETPEMMEARCKSTNHPTKYDRVVRREVCRIITKGTQTY-SVLDGDPSE 119
Query: 453 S---YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+ YL+ + E + A R +G+C VD + + +GQ DD S L++ P
Sbjct: 120 THNKYLLCIKEKAEDCAGH--QRIYGVCFVDTSVGKFYVGQFTDDRHSSRFRTLVAHYPP 177
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE---TTVLEIKNIYNRITAES 566
V+I+ S +T + + + + + L+ S+FW+A T++E ++ AES
Sbjct: 178 VQILFEKGNPSADTHKILKGSLSSAMQDSLISGSQFWNASKTLKTLIEGGYFEDKQNAES 237
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
+ + +E D L PG +EL LSALGG +FYLKK F+D
Sbjct: 238 ELTLPPVIKSMTSENDSLGLTPGENNEL---------ALSALGGCVFYLKKCFID 283
>gi|336110076|gb|AEI16806.1| mutS protein 6 [Uma scoparia]
Length = 324
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 163/315 (51%), Gaps = 35/315 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVE 392
+WWE KS++ D VIF+K+GKFYEL+ MDA +G +L L +MKG H GFPE F
Sbjct: 1 KWWELKSQNFDCVIFYKVGKFYELYHMDAVIGVNKLGLVFMKGTWAHSGFPEIAFDRFSN 60
Query: 393 KLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVKREICAVVTKGTLT----EGEL 445
L +KG++V+ VEQ ET E +E R K D+VV RE+C +++KGT T +G+
Sbjct: 61 ILVQKGHKVVRVEQMETQEMMEARCKSMSHPTKFDRVVYREVCRIISKGTQTYSILDGDF 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ YL+ + E + S R +G+C VD + LGQ DD S LL+
Sbjct: 121 --SETHNKYLLCIKE--KCDDSAGLHRTYGVCFVDTTVGKFYLGQFQDDRHSSRFRTLLA 176
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE-IKNIYNRITA 564
PV+I+ S ET++ + + + L S+FW+A T+ I+ Y +
Sbjct: 177 HYTPVQILFERGNPSAETQKIMKSLLPSTVQEGLTAGSQFWNASKTLKTLIEEGYFQ--- 233
Query: 565 ESLNKADSN--------VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NK +SN + + AE D L PG SEL LSALG +FYLK
Sbjct: 234 ---NKENSNSGVVLPPLIQSMTAESDSLGLTPGENSEL---------ALSALGCCVFYLK 281
Query: 617 KSFLDETLLRFAKFE 631
K +D+ +L AKFE
Sbjct: 282 KCIIDKEILSMAKFE 296
>gi|336109988|gb|AEI16762.1| mutS protein 6 [Varanus exanthematicus]
Length = 215
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/205 (42%), Positives = 119/205 (58%), Gaps = 3/205 (1%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL++P D+L+N + G ++WWE KS++ D VIF+K+GKFYEL+ MDA VG +L L
Sbjct: 3 YDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLL 62
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK---DKVVK 428
+MKG H GFPE F L +KG++V+ VEQ ETPE +E R K D+VV+
Sbjct: 63 FMKGTWAHSGFPEIAFDRFSNILVQKGHKVVRVEQMETPEMMEARCKSLAHPTKFDRVVR 122
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
RE+C +++KGT T L D L + S +G+C VD R L
Sbjct: 123 REVCRIISKGTQTYSVLDGDYSDTHNRYLLCVKEKVDDSAGVHXTYGVCFVDTTVGRFYL 182
Query: 489 GQVMDDLDCSVLCCLLSELRPVEII 513
GQ +DD CS LL+ PV+I+
Sbjct: 183 GQFLDDRHCSRFRTLLAHYAPVQIL 207
>gi|124506031|ref|XP_001351613.1| DNA repair protein, putative [Plasmodium falciparum 3D7]
gi|23504540|emb|CAD51420.1| DNA repair protein, putative [Plasmodium falciparum 3D7]
Length = 1350
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 144/501 (28%), Positives = 232/501 (46%), Gaps = 56/501 (11%)
Query: 471 DRC-FGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR 529
++C FG V D+ATS I +G DD VL +L++L P EI+ + ++ E +I +
Sbjct: 596 NKCNFGFVVSDIATSYIAVGYCNDDESRIVLRTILAQLCPAEILYSSKNINKEV-LSIFK 654
Query: 530 HTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+ P +L L+ F + ++ EI NK N+ ++
Sbjct: 655 NI--PTSPELTCLNSFPNIISSFDEI------------NKYFENMPSN------------ 688
Query: 590 ILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVL 649
+ + V+ A GG + YL+ LD+ + RF K E + ++ YMVL
Sbjct: 689 -----LEIYKEQTSVICAFGGFIVYLRSLLLDKKIFRFCKIE-----KYDLFKRETYMVL 738
Query: 650 DAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV 709
DA AL++LE+ E ++SGD+ +LY +N T FG R LR W+ PL + IRER D V
Sbjct: 739 DATALKHLEILE-TQSGDTKNSLYDYVNKTCTNFGARNLRRWICSPLLDCEKIRERLDVV 797
Query: 710 AGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI 769
L+ Q +L R L +LPD+ERLL ++ + + R + V +++ +L+EF+
Sbjct: 798 DFLKNNEQILSL-IRMKLKKLPDIERLLNKICIQASQSERGA---VFFDNVVNTKLKEFV 853
Query: 770 SALHGCELMDQACSSLGAILENTE--SRQLHHILTPG------KG-LPAIVSILKHFKDA 820
+ L+ + +D + I + E SR TP KG P I I F
Sbjct: 854 TFLNAFKEIDTMLIDVNRIERDGELPSRLFQICNTPDICKDNIKGSYPNIGLITNEF--- 910
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
+ + + P G D D D +K K +E L L+ R L ++ +V K
Sbjct: 911 LEKIYFDGDKEYKPAEGCDEDIDKINEKEKNVENKLNNVLEHMRTQLKIPTLKFVH-AKF 969
Query: 881 LYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
Y +E P+++ S ++ E+ S+KKG+ R IK L+ +L E EK+ A+ Q+L
Sbjct: 970 KYEVECPDNIPKSFLKNVEITSAKKGYVRIHNDEIKSLVEKLEDIEQEKKDAIYPFFQKL 1029
Query: 941 IGQFCEHHNKWRQMVAATAGL 961
F H+ K+ A L
Sbjct: 1030 FHLFYAHYEKYVSACRLVAEL 1050
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 12/169 (7%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLR--------NLSEGQKQWWEFKSKHMDKVIFFKMG 351
RD R P YD T++ PP + + + G +Q+W+ KS++ DK+IFFKMG
Sbjct: 370 RDINLRTPDHADYDSSTIWTPPPDHKWAIEYKQAHYTPGMQQFWKIKSRNFDKIIFFKMG 429
Query: 352 KFYELFEMDAHVGAKELDLQYMKGE-QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
+FYE+F +DA + L +M GE +PH GFPE++ +K+ G++V+V+EQ ETP
Sbjct: 430 RFYEIFYIDACLMHTICSLNWMSGEHKPHLGFPEQSLHFYAKKVINSGHKVVVIEQMETP 489
Query: 411 EQLELRRKEK-GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
++LE R KE G KDK +KREI + TKGT+ +LSA + YL+
Sbjct: 490 KELEQRNKESIGPKDKAIKREINEIYTKGTILHDNMLSA--ETKYLVCF 536
>gi|340506212|gb|EGR32403.1| hypothetical protein IMG5_084640 [Ichthyophthirius multifiliis]
Length = 1002
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 165/690 (23%), Positives = 327/690 (47%), Gaps = 68/690 (9%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
+D + R P D YD TL++P L N +Q+W+ KS++ DK++FF++G+ + +
Sbjct: 68 KDKEGRSPSDPNYDSSTLHIPVKILSNERPLYQQYWQVKSENYDKLVFFRLGRNFMCYYE 127
Query: 360 DAHVGAKELDLQY-MKGEQPHCGFPERNFSMNV-EKLARKGYRVLVVEQTETPEQLELRR 417
DA + + DLQ M G +P + + + + E L + +VV+Q + +
Sbjct: 128 DAFLMKRMFDLQVKMWGNKPFVMIWDSQYPLYIKETLEKANKTCIVVDQVSKKTIQKYIK 187
Query: 418 KEKGSKDKVVKREICAVVTKGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFG 475
+ K ++ + +++KGT T + ++ N D + ++M L ES D G
Sbjct: 188 IKINKKREITQ-----IISKGTYT--DFMNTNEDYNERFMMVLVES-------QIDSSLG 233
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
I ++D T +++L + D + + L +L + +PVE+ N LS +T + + + P
Sbjct: 234 IALIDCTTHKVLLDDIKGDKNGNYLRTILRKYKPVEVYSKKNNLSLQT-KNLCKIISKPQ 292
Query: 536 VNDLVPLSEFWDAETTVLE-IKNIYNRITAESLNKADSNVANSQAEGDGLTCL----PGI 590
N ++ E E +++I+ + E ++ S+V+ + + P I
Sbjct: 293 FN--------FEYENKSFEPLESIFQGLKDE-FSQEQSDVSLQLNQNQQQNNIKREYPEI 343
Query: 591 LSEL--------------ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
++ + +L ++ L YLK L+E + + + FE L
Sbjct: 344 FKKIETLYIQQKEKDEDFMDQSFDYYMLLQSVYLLLNYLKFLKLNENVFQQSTFEFLD-- 401
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSG--DSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
Y+VLD+ A+ENL++FE ++ G+L L++ T FGKR L+ WL
Sbjct: 402 --EKTQSNDYLVLDSHAIENLDIFEVNQITKIQEEGSLLDFLDYTKTKFGKRKLKKWLMY 459
Query: 695 PLYNSGLIRERQDAVAG-LRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL N I+ERQ V L +N + +F K + L D+ER L+++F SS+ + N +
Sbjct: 460 PLKNIKQIQERQTTVQEILENIN--YFEDFLKKIQLLGDLERNLSKVFNSSQFSRLNPSS 517
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSI 813
+++ + ++L+E + +++ Q + L L+ S L +I + LP ++ +
Sbjct: 518 ---FDNFSHQRLKESFLFIKNLKILHQ--NFLEFPLKEFSSNILKNIFQK-QDLPKLLDL 571
Query: 814 LKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
++ ++ + + +G P G+D YD K +++I+ + + + + R+ L + I
Sbjct: 572 IQKIENQ---LFQDENGNCFPKPGIDPTYDEILKNMEQIKDEMNQEVNKWRQKLKNLDIK 628
Query: 874 YVTIGKDLYLLEVPESL-RGSV-PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKES 931
+ + Y ++VPES+ +G + P+++ L S KG+ R+ T I +LL ++ E +
Sbjct: 629 LIK-TRLQYEIQVPESIVQGQLKPKEFSLTSKVKGYQRFQTEQIIQLLKKIKTEEINIQK 687
Query: 932 ALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
AL QF + + +++ + + L
Sbjct: 688 ALAPFCITFFHQFFSQRDFFYKILNSLSDL 717
>gi|340057247|emb|CCC51590.1| putative mismatch repair protein MSH8 [Trypanosoma vivax Y486]
Length = 1002
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 190/735 (25%), Positives = 313/735 (42%), Gaps = 132/735 (17%)
Query: 309 DVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL 368
D + P T+ +P L ++ ++Q+W+ KSK+ D +IFFK GKFYEL+++DA +G +E
Sbjct: 25 DPMHRPSTITIPAKDLEAMAAMERQYWDIKSKYYDVMIFFKKGKFYELYDVDAAIGHREF 84
Query: 369 DLQYM-----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK 423
L+ + +G+ G PE++FS +GY+V VEQ + ++ K ++
Sbjct: 85 GLKLVFDCTNRGKMRLSGIPEQSFSEWARLFVFRGYKVGRVEQMKEEDE----SVSKWNR 140
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
KVV RE+ V+T GTL + +L + A ++++ TD VD++
Sbjct: 141 QKVVPRELVEVLTPGTLKDPLMLCGH-GAVFIVSFYP--------QTDNIVDSFAVDLSR 191
Query: 484 SRIILGQVMDDLDCSV----------------LCCLLSELRPVEIIKPANMLSPETERAI 527
+V+ C V + LL +LRP EII P ++ + ++
Sbjct: 192 ------RVVYHCPCGVENDGKRSTREEEVLNEVAALLQQLRPREIIFPRSLTT-----SV 240
Query: 528 LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCL 587
++ + L LV T +E + + S N E LT
Sbjct: 241 VKEEKKSLAKRLV----------TWIEAEGFTVELVDASFASPSHGSVN---ESCNLTAA 287
Query: 588 PGILSELIST--GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC-------SGF 638
+L+ T + +LS F+L L T+ R + + C
Sbjct: 288 RDLLAHYFRTLKMNDPESILSEAQPYTFHLSTQQL--TVPRSPLNQNISCVPSILQHERR 345
Query: 639 GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
GD+ ++LDA ++ NLE+ N R GD G+L LN C T GKRL R+W+ RP +
Sbjct: 346 GDLG----LILDASSIGNLELVGNLRDGDERGSLNQLLNRCCTNGGKRLFRSWILRPSAS 401
Query: 699 SGLIRERQDAV---------------AGLRGVNQPF-------ALEFRK-----ALSRLP 731
+I+ RQDAV L GV A E R + +
Sbjct: 402 CRVIKARQDAVRFIAENRLNECWGETCELEGVQMAMPTLSKSEACESRTDYISATTTSIC 461
Query: 732 DMER-------------LLARLF---ASSEANGRNSNKVVLYED---AAKKQLQEFISAL 772
+R LLA F S A+ +N + V Y D KK ++ +S +
Sbjct: 462 GSKRIRSSGLFGEKFGILLAVDFERNISRLADLKNDSSQVAYVDPLVQYKKHIELILSTV 521
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
G + M Q S + ++T L + + A+ L + FD A ++ I
Sbjct: 522 DGLKEMVQWAKS---VYKSTAPPLLQELWA---DINAVAPALSSIEGCFDLRVAQSTSVI 575
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVP--ES 889
+P G YD ++ +EA L + LK+ Q + G I++ IG+D +++EVP +
Sbjct: 576 VPSPGTFPTYDKVSDRLDRVEAQLNQMLKQLQENVFGGADISFSHIGRDQFMVEVPLRAA 635
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
LR + P E RS RY ++ L+ E +A+ +K SAL +L+ + N
Sbjct: 636 LRMNCPGFVE-RSRTSSCVRYTVATLEPLIEEHKRAKLDKSSALLQVLRSVATHIL---N 691
Query: 950 KWRQMVAATAGLTLI 964
+ + +A A L+ I
Sbjct: 692 YFPVLYSAAAALSYI 706
>gi|154293501|ref|XP_001547279.1| hypothetical protein BC1G_13901 [Botryotinia fuckeliana B05.10]
Length = 737
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 190/379 (50%), Gaps = 33/379 (8%)
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
++SA G YLK L++ LL F S + + K +VLD L NLE+F N+
Sbjct: 93 LISAFGALFQYLKFLQLEKPLLTQGNF-----SWYNPIQKGTTLVLDGQTLINLEIFSNT 147
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
G+S GTLY L+ C T FGKRL R W++ PL + I ER DAV L N+ + F
Sbjct: 148 FDGNSDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRINERLDAVDFLNRDNE-LSRSF 206
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
+ + S +PD+ERL++R+ A S + ++F+ L G E ++
Sbjct: 207 KSSTSAMPDLERLISRIHAGS------------------CRPEDFVKVLEGFEQIEYIQK 248
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
+ + + + + + L +P + L+ +K AFD +A ++P GV+ D+D
Sbjct: 249 DI--LGKYSSGDGIFNRLVAS--IPDLAEPLQWWKTAFDRKKAKEHKILVPERGVEEDFD 304
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
++ +++EI L LK+ +K + +IGK+++ L+VP S++ VP+D+++ S+
Sbjct: 305 ASQDRIEEINQELASLLKKYQKKFDSKKVELKSIGKEIHQLQVPVSIK--VPKDWKVTSA 362
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
GF RY+ P + ++ +L + + +K + R +F E + W Q V A L
Sbjct: 363 ASGFKRYYFPELTNIIRDLQETQETHGQIVKEVASRFYARFDEDYKTWLQAVKVVAQLDC 422
Query: 964 ILLDGSLLHAFLILQSNSC 982
++ SL A L + SC
Sbjct: 423 LV---SLAAASSALGTTSC 438
>gi|67472182|ref|XP_651951.1| mutS family protein [Entamoeba histolytica HM-1:IMSS]
gi|56468745|gb|EAL46564.1| mutS family protein [Entamoeba histolytica HM-1:IMSS]
Length = 934
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 156/612 (25%), Positives = 268/612 (43%), Gaps = 95/612 (15%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ FL + +D ++ G+ YDP TL++P L ++ +KQ+W K + D VIFF
Sbjct: 33 ERYSFL-INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFA 91
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G KEL L+ + G P+ +F+ KL GY++ V++ E
Sbjct: 92 KGKFYELYENDADIGNKELGLKITNRVNMRMAGVPKASFNTYASKLLELGYKIGCVDEKE 151
Query: 409 TPEQLELRRKE---KGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
T E+ + R G ++ +V+RE+ + T T TE EL S D + MA+ + +
Sbjct: 152 TSEESKKRGATVIVNGKREPNIVRRELTRIYTVSTATEPELCSDTSDM-FCMAIISNGCN 210
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
G+C DV+ RI LG + D + L LL + P EI+
Sbjct: 211 ---------VGVCYGDVSVGRIFLGYLEDTELHNSLHTLLHRVHPKEIL----------- 250
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
N + +D+ + ++L A+ + +G+
Sbjct: 251 ------LLNSISDDIAHI---------------------CKNLKFAEITYVKEPEDINGV 283
Query: 585 TCLP-----GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
LP G + +++ + QV++A Y + +T + F G
Sbjct: 284 --LPLFADRGRVPKVVEKYSTNDQVMTAFTVLYNYFTTLLVPKTTIINGTF------GEY 335
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT-WLARPLYN 698
+ Y+++DA ++ NL +F S+ + GTL +++C TAFGKR+LR +L +PL +
Sbjct: 336 TTLSQDYLIVDAQSIVNLALFA-SKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMD 394
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS--SEANGRNSNKVVL 756
I RQ+ V N + L +PD+ERLL++ +S +E+N
Sbjct: 395 VNKILHRQEVVEFFLE-NNDLIDQIGTFLRVIPDLERLLSQCTSSTITESN--------- 444
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILK 815
FI + G E + + L I+++ E Q + G P + +
Sbjct: 445 -----------FIRMISGFETCQKLMNELKTIVKDMPEVLQTIVLDKNNLGYPNLEEFIS 493
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ +D+ A I G + + D A ++ E+E K L +K+ G+ YV
Sbjct: 494 KLESIYDFTSAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVSIKKIFGEAK--YV 551
Query: 876 TIGKDLYLLEVP 887
IG D +L+ +P
Sbjct: 552 NIGGDDHLIALP 563
>gi|449705043|gb|EMD45176.1| mutS family protein [Entamoeba histolytica KU27]
Length = 934
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 156/612 (25%), Positives = 268/612 (43%), Gaps = 95/612 (15%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ FL + +D ++ G+ YDP TL++P L ++ +KQ+W K + D VIFF
Sbjct: 33 ERYSFL-INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFA 91
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G KEL L+ + G P+ +F+ KL GY++ V++ E
Sbjct: 92 KGKFYELYENDADIGNKELGLKITNRVNMRMAGVPKASFNTYASKLLELGYKIGCVDEKE 151
Query: 409 TPEQLELRRKE---KGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
T E+ + R G ++ +V+RE+ + T T TE EL S D + MA+ + +
Sbjct: 152 TSEESKKRGATVIVNGKREPNIVRRELTRIYTVSTATEPELCSDTSDM-FCMAIISNGCN 210
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
G+C DV+ RI LG + D + L LL + P EI+
Sbjct: 211 ---------VGVCYGDVSVGRIFLGYLEDTELHNSLHTLLHRVHPKEIL----------- 250
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
N + +D+ + ++L A+ + +G+
Sbjct: 251 ------LLNSISDDIAHI---------------------CKNLKFAEITYVKEPEDINGV 283
Query: 585 TCLP-----GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
LP G + +++ + QV++A Y + +T + F G
Sbjct: 284 --LPLFADRGRVPKVVEKYSTNDQVMTAFTVLYNYFTTLLVPKTTIINGTF------GEY 335
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT-WLARPLYN 698
+ Y+++DA ++ NL +F S+ + GTL +++C TAFGKR+LR +L +PL +
Sbjct: 336 TTLSQDYLIVDAQSIVNLALFA-SKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMD 394
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS--SEANGRNSNKVVL 756
I RQ+ V N + L +PD+ERLL++ +S +E+N
Sbjct: 395 VNKILHRQEVVEFFLE-NNDLIDQIGTFLRVIPDLERLLSQCTSSTITESN--------- 444
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILK 815
FI + G E + + L I+++ E Q + G P + +
Sbjct: 445 -----------FIRMISGFETCQKLMNELKTIVKDMPEVLQTIVLDKNNLGYPNLEEFIS 493
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ +D+ A I G + + D A ++ E+E K L +K+ G+ YV
Sbjct: 494 KLESIYDFTSAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVSIKKIFGEAK--YV 551
Query: 876 TIGKDLYLLEVP 887
IG D +L+ +P
Sbjct: 552 NIGGDDHLIALP 563
>gi|407038395|gb|EKE39107.1| mutS family protein [Entamoeba nuttalli P19]
Length = 934
Score = 164 bits (414), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 156/612 (25%), Positives = 268/612 (43%), Gaps = 95/612 (15%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ FL + +D ++ G+ YDP TL++P L ++ +KQ+W K + D VIFF
Sbjct: 33 ERYSFL-INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFA 91
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA +G KEL L+ + G P+ +F+ KL GY++ V++ E
Sbjct: 92 KGKFYELYENDADIGNKELGLKITNRVNMRMAGVPKASFNTYASKLLELGYKIGCVDEKE 151
Query: 409 TPEQLELRRKE---KGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
T E+ + R G ++ +V+RE+ + T T TE EL S D + MA+ + +
Sbjct: 152 TSEESKKRGATVIVNGKREPNIVRRELTRIYTVSTATEPELCSDTSDM-FCMAIISNGCN 210
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
G+C DV+ RI LG + D + L LL + P EI+
Sbjct: 211 ---------VGVCYGDVSVGRIFLGYLEDTELHNSLHTLLHRVHPKEIL----------- 250
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
N + +D+ + ++L A+ + +G+
Sbjct: 251 ------LLNSISDDIAHI---------------------CKNLKFAEITYVKEPEDINGV 283
Query: 585 TCLP-----GILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFG 639
LP G + +++ + QV++A Y + +T + F G
Sbjct: 284 --LPLFADRGRVPKVVEKYSTNDQVMTAFTVLYNYFTTLLVPKTTIINGTF------GEY 335
Query: 640 DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT-WLARPLYN 698
+ Y+++DA ++ NL +F S+ + GTL +++C TAFGKR+LR +L +PL +
Sbjct: 336 TTLSQDYLIVDAQSIVNLALFA-SKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMD 394
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS--SEANGRNSNKVVL 756
I RQ+ V N + L +PD+ERLL++ +S +E+N
Sbjct: 395 VNKILHRQEVVEFFLE-NNDLIDQIGTFLRVIPDLERLLSQCTSSTITESN--------- 444
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILK 815
FI + G E + + L I+++ E Q + G P + +
Sbjct: 445 -----------FIRMISGFETCQKLMNELKTIVKDMPEVLQTIVLDKNNLGYPNLEEFIS 493
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ +D+ A I G + + D A ++ E+E K L +K+ G+ YV
Sbjct: 494 KLEGIYDFTSAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVSIKKIFGEAK--YV 551
Query: 876 TIGKDLYLLEVP 887
IG D +L+ +P
Sbjct: 552 NIGGDDHLIALP 563
>gi|157876856|ref|XP_001686770.1| putative mismatch repair protein MSH8 [Leishmania major strain
Friedlin]
gi|68129845|emb|CAJ09151.1| putative mismatch repair protein MSH8 [Leishmania major strain
Friedlin]
Length = 1014
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 184/730 (25%), Positives = 311/730 (42%), Gaps = 108/730 (14%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T+ +P +L ++ ++Q+W+ KSKH + VIFFK GKFYEL++ DA + +E L+ +
Sbjct: 29 PSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFGLKMV 88
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++++ +GY+V VEQ + E + + +K KVV
Sbjct: 89 LDTSNRGKMRLAGVPEQSYNEWARLFVYRGYKVGRVEQMKESES-----EAQAAKTKVVP 143
Query: 429 REICAVVTKGTLTEGELLSANPDASYL-------------------MALTESNQSPASQS 469
RE+ V+T GTL + +LS + + L ++L + + P S
Sbjct: 144 RELVEVLTPGTLKDPSMLSDHREVFVLSLAPVCRDGELVIDAFAVDLSLRIAYRCPCSSR 203
Query: 470 TDRCFGICVVDVATSRIILGQ------VMDDLDCSVLCCLLSELRPVEIIKPANMLSPE- 522
C D +S + + + + D L LL +L P E+I P++ P+
Sbjct: 204 NREAKTGC--DTISSELSIKRENGVCGSLKDSTLRTLSALLQQLSPKEVIIPSSDWVPKD 261
Query: 523 -TERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG 581
R HT + + W E+ +++I +R +SL+ + V Q
Sbjct: 262 AERRQAFEHTCDEITK--------W-TESEGFSVEHISSR-ALQSLSMT-AMVTAEQVMA 310
Query: 582 DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM 641
T L L+ I+ + ++ + L G + + + L A +
Sbjct: 311 SYFTFLR--LASDIAIFSTATEYTAHLSGAIGADSGTAASDATLNMAASGKTSIMAYERR 368
Query: 642 AKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGL 701
K +VLDA + NLEV N G +L LN C T G+RL R+WL RP +S +
Sbjct: 369 FDKG-LVLDATTVSNLEVLTNLHDGSDKHSLNECLNRCSTNGGRRLFRSWLLRPSASSRV 427
Query: 702 IRERQDAVAGLRGVNQPFALE---------------------FRKALSRLPDMERLLARL 740
I RQDAV L N +L F +S D ER L+RL
Sbjct: 428 IAARQDAVRFLARYNLLHSLRDMEVSEQVGEKRSRSNEGLSLFSSVVS--VDFERFLSRL 485
Query: 741 FASSEANGRNSNKVVLYEDAA---KKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
+ + RN + Y D KK L +S++ QA S++ + +R
Sbjct: 486 SDIKQNDSRN----IAYVDPMVQYKKNLGIILSSV-------QALSAMVGWGKQFLARCR 534
Query: 798 HHILTPGKGLPAIVSIL-----------KHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
G G+PA++ L K + FD A S +IP G +D+A
Sbjct: 535 EVACEQGTGIPALLGELLEEVTTAEASSKRIEGLFDRQAAEESSLLIPSPGTSSVFDAAT 594
Query: 847 KKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSSK 904
K++ +E+ L ++ Q+ + + +GKDL+L+EV + P R+
Sbjct: 595 AKLRHVESKLHDVRRQLQQDVFRGAQAHFTDLGKDLFLIEVAVADAPKMTPAGMVERARN 654
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+Y +I+ L+G +A + K AL ++L + + C +++ + +A+ L+ I
Sbjct: 655 AKSVKYVVSSIEALVGAHKEATAMKAGALLTVLCSVASRIC---DEFPHLFSASRALSYI 711
Query: 965 --LLDGSLLH 972
LL + LH
Sbjct: 712 DCLLSLAQLH 721
>gi|190404939|gb|EDV08206.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
Length = 564
Score = 162 bits (411), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 159/296 (53%), Gaps = 21/296 (7%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI 549
>gi|326668008|ref|XP_003198705.1| PREDICTED: DNA mismatch repair protein Msh3-like [Danio rerio]
Length = 1083
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 170/626 (27%), Positives = 280/626 (44%), Gaps = 95/626 (15%)
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YM 373
+T+Y P + +Q+ E K +H+D V+ + G Y F DA + AKEL++ ++
Sbjct: 185 KTIYTPLE---------EQYMEIKKQHVDTVLCVECGYKYRFFGEDAEIAAKELNITCHL 235
Query: 374 KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
P ++V +L +GY+V VV+QTET + +K + R++ A
Sbjct: 236 DHNFMTASIPTHRLFVHVRRLVSQGYKVGVVKQTETTAI----KASSANKSSLFSRQLHA 291
Query: 434 VVTKGTLT--------------EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVV 479
+ TK TL + E + + +YLM ++ES QS + G+ VV
Sbjct: 292 LYTKSTLVGEDVNPLLKLGDLEQAEDVVQDSGNNYLMCVSESFDK---QSKELTVGMVVV 348
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV--N 537
+ +++ D+ S L + ++PVEI+ P++ LS TER +LR+ V +
Sbjct: 349 QPSIGDVMVDCFKDNTSHSALESRILRIQPVEILVPSD-LSETTER-LLRNIALSSVQAD 406
Query: 538 DLVPL----SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
D + + S ++ T + IK+ Y + A + +G C+ G+ S
Sbjct: 407 DRIRIEKRESAMFEYPTALSIIKDFYR--------GGPHSAAGNHEKGSYSLCM-GLESP 457
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPA 653
+I LG + YL + L++ LL + F+ L + +M+L A
Sbjct: 458 IIC----------CLGPVIQYLTEFKLEKILLCSSSFKRLS-------SDSDHMLLSAAT 500
Query: 654 LENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR 713
++NLE+ N +G G+L L+H T FGKRLLR W+++PL + I+ RQ+AVA +
Sbjct: 501 MKNLEILCNQTTGSVKGSLLWVLDHTQTLFGKRLLRKWVSQPLKSVIDIQARQEAVAEIL 560
Query: 714 GVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
+ L+RLPD+ER L ++ KK+ IS+L
Sbjct: 561 SSESSVLPSIQSLLTRLPDLERGLCSIYH-------------------KKEFYLIISSLS 601
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
+ QA + AI S L +L P ++S +F + A +
Sbjct: 602 RLNVELQAL--MPAIQSQLSSPLLKTLLLDT---PQLLSPAHNFLKVLNEKAAKTGNK-- 654
Query: 834 PHGGVDM-DYDSACKKVKEIEASL---TKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
VD+ D+ K +EIE+ L +H +E R LL + S+ Y T+ +L+EV S
Sbjct: 655 TEMFVDLTDFPVIRKTKEEIESVLLDIMEHRREVRLLLKNPSLDYTTVSGQQFLIEVKNS 714
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNI 915
+ VP D+ SS K F RY TP I
Sbjct: 715 MSSIVPADWVKISSTKVFGRYHTPFI 740
>gi|403160228|ref|XP_003320781.2| hypothetical protein PGTG_02803 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169467|gb|EFP76362.2| hypothetical protein PGTG_02803 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1162
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 166/655 (25%), Positives = 292/655 (44%), Gaps = 90/655 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQPHCGFPE 384
L++ ++QW EFK ++ + VIF ++G LF DA + ++ L + ++ G + FP+
Sbjct: 205 LTQLEQQWAEFKKQYPNLVIFMEVGYKIRLFGEDAVLASQVLSIGHLAIPGRET-AYFPK 263
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +++ ++ G+++ + Q+ET EKG K +V R + V + T TE
Sbjct: 264 TSLYIHMSRMVMAGHKIGLFVQSETRSLRNTELGEKGKKARVFGRHLAGVYSLSTWTES- 322
Query: 445 LLSANPDASYLMALTESN-------------QSPASQSTDR----CFGICVVDVATSRII 487
D + + +T+S SPA++ R + + I+
Sbjct: 323 ------DPNQALGITDSETGLAQNWIVSFHASSPATRHPQREEKVQLSMAAICPQNGEIV 376
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV-PLSEFW 546
+DD S+L ++ LRPVEI+ P + L +E+ I ++PL V P E
Sbjct: 377 WDSWLDDPIRSMLETRMTYLRPVEILVPLSGLDGPSEKLINWLIKDPLARSSVKPRLEST 436
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVA-----NSQAEGDGLTCLPGILSELISTGDSG 601
D + T + + K+ +++A N +EGD + P L ++ D
Sbjct: 437 DHDYTPQSAYKLVSNFCQPPKRKSKASMASQDKGNPVSEGD--STEPEFLHHIVELPDG- 493
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
VL AL G + ++K S+ E++ R F + YM+LDA L+NLE+FE
Sbjct: 494 --VLIALAGLIVHMK-SYQLESIFR-------QPGQFKSFINQSYMILDANTLKNLEIFE 543
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG-LRGVNQPFA 720
NS G+L+ L+ TA GKR+L+ W+ +PL + +++ER DA+ + N P
Sbjct: 544 NSTDRTERGSLFWVLDRTKTAMGKRILKQWIGKPLVDQRILKERADAIEEIIVSQNHPIL 603
Query: 721 LEFRKALS-RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
++ R+ L RLPD+E+ L R + Y +K+L +F+ E+M
Sbjct: 604 IKMRRMLGMRLPDLEKSLVR---------------IQYGKCTEKELLKFL------EVMV 642
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKD-AFDWVEANNSGRIIPHGGV 838
+ ++ G+ +++ + L I + ++ ++ N+ I+
Sbjct: 643 ELTATFGSPSSAGSGKRMFN----SSLLQGIFEVFSAVREQTIEYRSELNAKAILKGEYE 698
Query: 839 DM---------DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
DM D + I+A +HL+ R L + + YVTIG D L+EV
Sbjct: 699 DMFTNADELYPDLTDLKDCLSCIQAESAEHLQACRITLQNPKLEYVTIGSDEMLIEVRHQ 758
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
VP ++ SS + R+ T ++LL AE +K AL I++R G F
Sbjct: 759 QLDRVPENWTKFSSTRAVQRFRTAEGQRLL-----AERDKYRAL--IVRRSRGYF 806
>gi|167384705|ref|XP_001737066.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900342|gb|EDR26686.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 934
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 157/609 (25%), Positives = 269/609 (44%), Gaps = 87/609 (14%)
Query: 289 ADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFF 348
++++ FL + +D ++ G+ YDP TL++P L ++ +KQ+W K + D V+FF
Sbjct: 32 SERYSFL-INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVVFF 90
Query: 349 KMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQT 407
GKFYEL+E DA +G KEL L+ + G P+ +F+ KL GY+V V++
Sbjct: 91 AKGKFYELYENDADIGNKELGLKITNRVNMRMAGVPKASFNTYASKLLELGYKVGCVDEK 150
Query: 408 ETPEQLELRRKE---KGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQ 463
ET E+ + R G ++ +V+RE+ + T T TE EL S D + MA+
Sbjct: 151 ETSEESKKRGATIIVNGKREPNIVRRELTRIYTVSTATEPELCSDTSDM-FCMAI----- 204
Query: 464 SPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPET 523
S D G+C D + R+ LG + D + L LL + P EI+
Sbjct: 205 --VSNGCD--VGVCYGDASVGRVFLGYLEDTELHNSLHTLLHRVHPKEIL---------- 250
Query: 524 ERAILRHTRNPLVNDLVPLSE-FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
N + +D+ + + AE T ++ E ++ AN
Sbjct: 251 -------LLNSISDDIAHICKNLKFAEITYVK--------EPEDISGVLPLFANR----- 290
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMA 642
G + ++I + QV++A Y + +T++ F G
Sbjct: 291 ------GRVPKVIEKYSTNDQVMTAFTILYNYFTTLLIPKTIIINGTF------GEYTTL 338
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT-WLARPLYNSGL 701
+ Y+++DA ++ NL +F S+ + GTL +++C TAFGKR+LR +L +PL +
Sbjct: 339 SQDYLIVDAQSIVNLALFA-SKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMDVNK 397
Query: 702 IRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL--FASSEANGRNSNKVVLYED 759
I RQ+ V N + L +PD+ERLL++ +E+N
Sbjct: 398 ILHRQEVVEFFLE-NNDLIDQIGTFLRVIPDLERLLSQCTSLTITESN------------ 444
Query: 760 AAKKQLQEFISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFK 818
FI + G E + + L AI+++ E Q + G P + + +
Sbjct: 445 --------FIRMVSGFETCQKLINELKAIVKDMPEVLQTIVLDKNNLGYPNLEEFISKLE 496
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
+D+ +A I G + + D A ++ E+E K L +K+ + YV+IG
Sbjct: 497 SIYDFTKAKEEHAITFFNGYNEEIDHAFERRNELENEFAKELVSIQKIFEEAK--YVSIG 554
Query: 879 KDLYLLEVP 887
D +L+ +P
Sbjct: 555 GDDHLIALP 563
>gi|157841276|ref|NP_001103184.1| DNA mismatch repair protein Msh3 [Danio rerio]
gi|123232732|emb|CAM16159.1| novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3)
[Danio rerio]
Length = 1083
Score = 160 bits (404), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 171/628 (27%), Positives = 282/628 (44%), Gaps = 99/628 (15%)
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YM 373
+T+Y P + +Q+ E K +H+D V+ + G Y F DA + AKEL++ ++
Sbjct: 185 KTIYTPLE---------EQYMEIKKQHVDTVLCVECGYKYRFFGEDAEIAAKELNITCHL 235
Query: 374 KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
P ++V +L +GY+V VV+QTET + +K + R++ A
Sbjct: 236 DHNFMTASIPTHRLFVHVRRLVSQGYKVGVVKQTETTAI----KASSANKSSLFSRQLHA 291
Query: 434 VVTKGTLT--------------EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVV 479
+ TK TL + E + + +YLM ++ES QS + G+ VV
Sbjct: 292 LYTKSTLVGEDVNPLLKLGDLEQAEDVVQDSGNNYLMCVSESFDK---QSKELTVGMVVV 348
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLV--N 537
+ +++ D++ S L + ++PVEI+ P++ LS TER +LR+ V +
Sbjct: 349 QPSIGDVMVDCFKDNMSHSELESRILRIQPVEILVPSD-LSETTER-LLRNIALSSVQAD 406
Query: 538 DLVPL----SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE 593
D + + S ++ T + IK+ Y + A + +G C+ G+ S
Sbjct: 407 DRIRIEKRESAMFEYPTALSIIKDFYR--------GGPHSAARNHEKGSYSICM-GLESP 457
Query: 594 LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSG-FGDMAKKP-YMVLDA 651
+I LG + YL + L++ LL CS F ++ P +M+L A
Sbjct: 458 IIC----------CLGPVIQYLTEFKLEKILL---------CSSSFKRLSSDPDHMLLSA 498
Query: 652 PALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG 711
++NLE+ N +G G+L L+H T FGKRLLR W+++PL + I+ RQ+AVA
Sbjct: 499 ATMKNLEILCNQTTGSVKGSLLWVLDHTQTLFGKRLLRKWVSQPLKSVIDIQARQEAVAE 558
Query: 712 LRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISA 771
+ + L+RLPD+ER L ++ K++ IS+
Sbjct: 559 ILSSESSVLPSIQSLLTRLPDLERGLCSIY-------------------HKREFYLIISS 599
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR 831
L + QA + AI S L +L P ++S +F + A +
Sbjct: 600 LSRLNVELQAL--MPAIQSQLSSPLLKTLLLDT---PQLLSPAHNFLKVLNEKAAKTGNK 654
Query: 832 IIPHGGVDM-DYDSACKKVKEIEASL---TKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
VD+ D+ K +EIE+ L +H +E R LL + S+ Y T+ +L+EV
Sbjct: 655 --TEMFVDLTDFPVIRKTKEEIESVLLDIMEHRREVRLLLKNPSLDYTTVSGQQFLIEVK 712
Query: 888 ESLRGSVPRDYELRSSKKGFFRYWTPNI 915
S+ VP D+ SS K F RY TP I
Sbjct: 713 NSMLSIVPADWVKISSTKVFGRYHTPFI 740
>gi|219109807|ref|XP_002176657.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411192|gb|EEC51120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1423
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 182/387 (47%), Gaps = 80/387 (20%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPP-DFLR----NLSEGQKQWWEFKSKHMDKVIFFKMGKFY 354
RDA+ R P YD RTL + D+L N+++ +QWW+ K+++ D V+ FK GKFY
Sbjct: 344 RDAQGRTPDHPDYDRRTLKVNSRDWLNVTGGNMTDAVQQWWDLKARYADTVLLFKTGKFY 403
Query: 355 ELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE 414
E+F DA VG + L YMKG H GFPE ++ ++L R GY+V VEQTETP+ L
Sbjct: 404 EMFHADADVGVQVCGLLYMKGHVAHAGFPEISYGPMADQLVRAGYKVARVEQTETPDALA 463
Query: 415 LRRK----EKGSKDKVVKREICAVVTKGTLTEGEL------LSANPDASYLMALTES--- 461
+R+K G KVV RE+C+++T GT T G L + L+A+ E+
Sbjct: 464 VRKKAHHRRNGPAPKVVNREVCSILTLGTRTFGYLDDDTHIATGQGGVGPLLAIRETLVD 523
Query: 462 ------------NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
Q+P + +GI +VD + +GQ DD+ S + LL+ P
Sbjct: 524 QGERQDDVEVEVQQAPVCE-----YGITLVDAVHGVVTIGQFADDVRRSRMDTLLTNFAP 578
Query: 510 VEI----------------IKPANMLSPETER-AILRHTR--------NPLVNDLV--PL 542
EI I+ A S ++ R I+R T +P + + PL
Sbjct: 579 SEILVEGGPNGASDTLLSLIRTAQKTSLQSTRLEIIRATEQFPQSTALDPEIRRKLDRPL 638
Query: 543 SEF--WDAETTVLEI--KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG 598
S+ WD T+ E+ + Y R + + Q + ++ P +L + G
Sbjct: 639 SQIHPWDVSETLDELHRRRYYPRASKQ------------QTDHVSVSRWPAVLRAAVEGG 686
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLL 625
+ LS+ G LFYL+++ +D LL
Sbjct: 687 --ATLALSSFGAVLFYLQRNLVDGELL 711
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 159/350 (45%), Gaps = 34/350 (9%)
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
+M LD L NLE+ NS ++G+L++++N T G RLLR WL RPL+ I R
Sbjct: 794 HMALDGTTLHNLEILYNSVDHKANGSLWSKINLTKTPHGSRLLRAWLLRPLFRRADIDRR 853
Query: 706 QDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEA-----------NGRN--- 750
DAV L AL E R L++ D+ERLL+R+ + S +G +
Sbjct: 854 ADAVQELVSGGAGMALSEARSVLAKCGDIERLLSRVHSMSGMTRIPGEEDDADDGSSYYP 913
Query: 751 SNKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAI-LENTESRQLHHILTPGKGL 807
S++ VLYE + K+++ +F L G + Q I +++ ++ G
Sbjct: 914 SDRAVLYETSTYTKRKVGDFSKVLKGLQHATQIPELFDGIEIQSGLLSKIVRFTDQGGCF 973
Query: 808 PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE----- 862
P ++ L+ F + FD +A G P G+D YD AC + I++ L + +E
Sbjct: 974 PNMIQELEWFFENFDLDQAAK-GFFEPSRGIDDLYDQACDAIAHIQSELNDYKEEMCSTY 1032
Query: 863 -QRKLLGDTSITYVTI---GKDLYLLEVPESLRGSVPRDYELR----SSKKGFFRYWTPN 914
Q + +S Y+ K+ Y +E+P S+R VP ++ L+ S K RY T
Sbjct: 1033 LQPRSAARSSWKYINTKPESKEKYTIELPASVR--VPDNFILKGKRGSGTKQMNRYRTAQ 1090
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
++ + E A ++ +Q + +F + W AT+ L I
Sbjct: 1091 LEHFVQEFENAYEVQKKRKARGMQLIFAKFDSMRSLWAAAAQATSLLDAI 1140
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 33/209 (15%)
Query: 54 NSNSNRTPSPS-PSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAAAKSYGEDVLRKRIRV 112
+S + + SPS P +T +P+ + K S +P P DVL+ V
Sbjct: 39 SSATTKPSSPSVPLESTNAPVPGDTKPSTDATTHSPKSTTKRPLTPPLRVGDVLQ----V 94
Query: 113 YWPLDKAWYEGCVKSFDKECNK--HLVQYDDGED-ELLDLGKEKIEWVQESVSLL----- 164
YWP DKA+Y+G + + + H + Y DG+ E +DL + + V
Sbjct: 95 YWPDDKAYYQGTLVQIRRATSAPLHCIDYGDGQAPEWIDLNTTQYQRVSNDNQQQNIDNN 154
Query: 165 ------KRLRRDSFKKVVVE-------DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
KR R + E D EE E+ DE DD S D+ N N +D
Sbjct: 155 NNRNQHKRRRIPEPDEPDEEAEFEFSGDLEEPESCADE--DDESAYEQDEQNDN---DDE 209
Query: 212 SEDEEVDLVDEQENKVLRGRKRKSSGVKK 240
+ED+ +V + E++ R KR S ++
Sbjct: 210 NEDQW--MVTDDEDEAPRKPKRHSVSSRR 236
>gi|240281682|gb|EER45185.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 312
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 153/289 (52%), Gaps = 18/289 (6%)
Query: 301 DAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMD 360
D R PG YDPRT+Y+PP S +KQ+WE K K D ++FFK GKFYEL+E D
Sbjct: 16 DIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEND 75
Query: 361 AHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKE 419
A +G + DL+ + G PE + + KG+++ V+Q+E+ E+R K+
Sbjct: 76 ATIGHQLFDLKLTDRVNMRMVGVPEMSLDHWANQFVAKGFKIARVDQSESALGKEMREKQ 135
Query: 420 ------KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES--NQSPASQSTD 471
G +DK+++RE+ V+T GTL +G +L + ++Y +A+ E+ N PA
Sbjct: 136 GKSNGTPGKQDKIIRRELSCVLTSGTLVDGSMLQDDM-STYCVAIKEALVNDLPA----- 189
Query: 472 RCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT 531
FGI VD AT + L + +DD D + +++ RP E++ +++S + R + +T
Sbjct: 190 --FGIAFVDTATGQFYLAEFIDDADMTKFETFVAQTRPQELLLEKSVMSTKALRILKNNT 247
Query: 532 R-NPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQA 579
PL N L EFW+A+ TV E+ ++ E N A A QA
Sbjct: 248 GPPPLWNYLNSCKEFWEADVTVRELDASNYFVSEEGDNIAAWPEALRQA 296
>gi|327263145|ref|XP_003216381.1| PREDICTED: DNA mismatch repair protein Msh3-like [Anolis
carolinensis]
Length = 986
Score = 157 bits (396), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 165/653 (25%), Positives = 287/653 (43%), Gaps = 73/653 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSMNV 391
Q+ E K+++ D ++ + G Y F DA + AKEL++ K P ++V
Sbjct: 87 QFLEMKNQYKDAILCVECGYKYRFFGEDAEIAAKELNIYCHKNHNFMSASIPTHRLFVHV 146
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKG-SKDKVVKREICAVVTKGT----------- 439
+L KGY+V VV+Q ET K G ++ + R++ A+ TK T
Sbjct: 147 RRLVAKGYKVGVVKQIETAA-----LKAAGENRSSLFARKLTALYTKSTILGEDVNPLLK 201
Query: 440 ---LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
L + E + ++ +YL+ ++ES ++ ++ D G+ V T +I D
Sbjct: 202 LNNLVDAEEIPSDVCDNYLLCISESKENIRDKNQDVHIGVVAVQPTTGEVIFDSFQDSAA 261
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
L L+ L+PVEII P ++ S +TE I T L +D + + E + E
Sbjct: 262 RLELESLILRLQPVEIILPKDV-SDQTENIISAVTSLRLQDDRIRIERM---ENKLFENS 317
Query: 557 NIYNRITAESLNKA-DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + IT N+ DS +++ LS L+ VL +L + YL
Sbjct: 318 SAFQLITDFYSNQVLDSTGSHA-------------LSVLVKLDKI---VLCSLAAVIVYL 361
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L+ L + F++L ++ YM L+ L+NLE+ +N S+G+L+
Sbjct: 362 KQFNLERILYNPSNFKMLS-------SEPEYMTLNGITLKNLEILQNQSDMKSNGSLFWI 414
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL S I R DAV+ + ++ + L ++PD+ER
Sbjct: 415 LDHTKTSFGRRRLKKWVTQPLLKSSEINSRLDAVSEVLMSESSVLIQIKTLLHKMPDVER 474
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+ ++ + + S + + QL+ I+A L+ + + A L
Sbjct: 475 GICSIY-----HKKCSTQEFFLIVSTLSQLEASITA-----LVPAIQTQVQAALLRKNLL 524
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
++ +L+P K +I++ EA SG D+ + EI+A
Sbjct: 525 EISDLLSPVKKYLSILN-----------EEAAKSGDKTQLFKDLQDFPLIRSRKDEIQAV 573
Query: 856 LTK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L + HL++ RK+L + YVT+ + +EV SL SVP D+ SS K R+ T
Sbjct: 574 LYQIQMHLQDIRKILKCSFAGYVTVSGQEFQIEVKNSLVFSVPSDWIQVSSTKAVSRFHT 633
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
P I + L+Q + + R + F +H+ + V A + I
Sbjct: 634 PFIVENYRHLNQLREQLVLDCNAEWLRFLDDFSDHYYSISKAVGHLATVDCIF 686
>gi|358057364|dbj|GAA96713.1| hypothetical protein E5Q_03384 [Mixia osmundae IAM 14324]
Length = 1095
Score = 156 bits (395), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 166/654 (25%), Positives = 270/654 (41%), Gaps = 75/654 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGF-PERNFSM 389
++QW + K+ + D V+ F++G + + DA + +K L + +G + + P +
Sbjct: 214 EQQWLDLKAANKDTVLAFEVGYKIQFWNEDALIASKILHIANFQGGKFNSAMVPTHRLML 273
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT----LTEGEL 445
+V++L GY+V +V Q ET +K +++++ KR+I T T L EL
Sbjct: 274 HVKRLVMAGYKVGIVRQVETAAL----KKVGSTRNQLFKRQITERYTLSTWVDELDSSEL 329
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S AS ++ + E + T F +C V T II DD L L
Sbjct: 330 SSEQGRASTIVVVLEDGMTRTDGKT--AFAVCSVTPGTGEIIWDSFDDDHLRHALETRLM 387
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L P E+I P LS +TE I LVN+ + + +R+
Sbjct: 388 HLAPGEVIVPIEKLSSQTESVI-----ATLVNN-----------REASQPRGRIDRVALM 431
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S +K + + + L G E I + +++ AL T+ +D+ L
Sbjct: 432 STSKHVEKLMEFYEQPKDVIDLDGDHVEPIIS----MEIIKALPETVKVALSVLIDQCAL 487
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F + L F ++ +M L L NLE+F+N G + GTL++ L+ T FG+
Sbjct: 488 FFLQNIFLRPKSFLPFGRRAHMTLTGQTLRNLEIFQNQTDGSAKGTLWSALDSTQTVFGR 547
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R+L+ WLA PL + ++ER AV + + + R L+ LPD+ER L R
Sbjct: 548 RMLKHWLAAPLIDPQALQERLKAVTEILTSSSFVIGKLRTVLTGLPDLERGLCR------ 601
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGC--ELMDQACSSLG----------AILENTE 793
V Y +L + +SAL EL A S G AI +
Sbjct: 602 ---------VHYRKITLPELSKMLSALSRVSGELQSMANPSAGEAVRSPLLKRAINTVAQ 652
Query: 794 SRQLHHILTPGKGLPAIVSILKH--FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
SR + LPA K FKD VEA A +
Sbjct: 653 SRSMIERFLNLLNLPACQESRKESMFKD----VEARAPAVF-----------DAQDVIST 697
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
IE L +HL E RKLL + Y+ + + YL+E+ S S+P D+ + +RY
Sbjct: 698 IEFELDQHLAELRKLLKKPRLKYIDVHLEKYLIEISRSDAASIPADWIRINGTNTNYRYR 757
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+P + +LL E +Q+ ++ A + + + +R ++ A L +L
Sbjct: 758 SPRMTELLAERAQSIERRDLAATEACHTYLDELGGEYVTFRAVIRTLAELDCLL 811
>gi|440297793|gb|ELP90434.1| DNA mismatch repair protein msH6, putative [Entamoeba invadens IP1]
Length = 959
Score = 155 bits (393), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 183/726 (25%), Positives = 319/726 (43%), Gaps = 128/726 (17%)
Query: 290 DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
+++ FL D +D +PG+ YDP +L +P L ++ +KQ+W K + D VIFF
Sbjct: 33 ERYKFL-QDVKDKNGHKPGESEYDPTSLLIPKLTLAQMTPFEKQYWNIKKDNFDTVIFFA 91
Query: 350 MGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE 408
GKFYEL+E DA + KE+DL+ + + G P+ +FS KL GY++ V++ E
Sbjct: 92 KGKFYELYENDADIANKEMDLKVVSRVNMRMAGVPKASFSTYASKLLNLGYKIGCVDEME 151
Query: 409 TPEQLELR---RKEKGSKD-KVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
T E+++ R + G K+ +V+RE+ + T TLT+ EL D + M+L
Sbjct: 152 TSEEMKKRGTTVRVNGKKEPNIVRRELRRIYTVSTLTDPELCLDTSDM-FCMSLV----- 205
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDC-SVLCCLLSELRPVEIIKPANMLSPET 523
T G+C DV+ R LG + DD D + L +L ++P E+
Sbjct: 206 ----FTGNNVGVCYGDVSVCRFFLGYI-DDTDLHNNLHTILHRVQPKEV----------- 249
Query: 524 ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDG 583
I+ T +SE +I+NI ++L A+ + + E G
Sbjct: 250 ---IVYKT----------ISE---------DIQNI-----LKNLGFAEISYVEEKTEKFG 282
Query: 584 LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP-----CSGF 638
+ + + +E ++ + G + KSF E ++ + + L+P F
Sbjct: 283 KSEVQKLFTERGKVPNTLEKYSENEG-----VMKSF--EIMVDYFRTLLIPDKSIVNGSF 335
Query: 639 GDM--AKKPYMVLDAPALENLEVFENSRSG-DSSGTLYAQLNHCVTAFGKRLLR-TWLAR 694
G+ + ++++DA ++ NL ++ +R G + GTL +++C T FGKR+LR ++ +
Sbjct: 336 GEYVTSSNDFLIVDAQSIVNLSLY--TRKGKEKEGTLLHFVDNCQTPFGKRILREKFILK 393
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS--EANGRNSN 752
PL + I +RQ AV N + + L LPD+ERLL + AS+ EAN
Sbjct: 394 PLMDVEKILKRQ-AVVEFFIENPTLVEQLKTFLKPLPDLERLLVQCDASTITEAN----- 447
Query: 753 KVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL------TPGKG 806
FI + G E C L L+N + L +L T G
Sbjct: 448 ---------------FIRLIAGFE----TCQKLMGELKNI-ADDLPDLLKVVVKNTNNLG 487
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
P + + + +D+ A + G + D D+A +K E+E K L+ ++
Sbjct: 488 FPDLEEFISRMEKTYDFERAKEERELTFFSGYNEDIDNAFEKRGELEKKFEKELESVKQN 547
Query: 867 LGDTSITYVTIGKDLYLLEVPESL-------RGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+ D + Y+++ + ++L V + S+P+ + + K R + I K+
Sbjct: 548 MSD--VKYISLNGEEHILNVSLKVFEKYIKKAKSLPKGFSEVNRTKNDIRLKSLQIMKIQ 605
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQS 979
E E + + +++ +++G VA T L + + L+ FL L
Sbjct: 606 SEYDVNEKQIADSHRTLFNQIMGD-----------VAKTGILVKAVENIGLVDCFLSLSD 654
Query: 980 NSCSSE 985
S S E
Sbjct: 655 ASQSME 660
>gi|301626456|ref|XP_002942407.1| PREDICTED: DNA mismatch repair protein Msh3-like [Xenopus
(Silurana) tropicalis]
Length = 1016
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 153/621 (24%), Positives = 280/621 (45%), Gaps = 85/621 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
++Q+ E KS H D ++ + G Y F DA + ++EL++ +M P +
Sbjct: 119 EEQYMEIKSHHTDAILCVECGYKYRFFGEDAEIASRELNIYCHMDHNFMTASIPAHRLFV 178
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT-------- 441
+V +L KGY+V VV+QTET + SK + R++ A+ TK TL
Sbjct: 179 HVRRLVAKGYKVGVVKQTETAA----LKAAGESKSSLFTRQLTALYTKSTLIGEDVSPLI 234
Query: 442 ------EGELLSANPDASYLMALTES-NQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
E E + A+ +SYL+ + E+ +++ +S D FG+ V +T ++ + D
Sbjct: 235 NIDDSLEVECIMADVPSSYLLCIFENIDRTKNKKSADAVFGLVAVQPSTGEVMYDRFHDT 294
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ L + L+PVEI+ P++ +S TER I T L +D
Sbjct: 295 KSRTELETRILRLQPVEILLPSD-ISDCTERLISSLTSASLRDD---------------- 337
Query: 555 IKNIYNRITAESLNKADSNVANSQA---------EGDGLTCLPGILSELISTGDSGSQVL 605
+RI E ++K S+ SQA + ++ L+E+++ S V+
Sbjct: 338 -----DRIRIERMDK--SHFEYSQAFQLISEFYGQEQHISAGSQKLTEILTFDKS---VI 387
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
+L T+ YLK+ L++ L + F + +K + ++ L+NLE+ +N
Sbjct: 388 CSLAATIKYLKEFHLEKILYNSSNFTQMS-------SKNECLRMNGTTLKNLEILQNQTD 440
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
+ G+L L+H T FG+R ++ W+ +PL N+ I R +AV+ + + + R
Sbjct: 441 LKTKGSLIWVLDHTRTCFGRRKIKQWVTQPLVNTREINARLEAVSEVLLSDSSVFTQVRS 500
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
LS+LPD+ER + ++ ++ + ++ +S L C + + + +
Sbjct: 501 HLSKLPDLERGVCSIY---------------HKKCSTQEFFLIVSTL--CNISNNMEALI 543
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI-IPHGGVDMDYDS 844
AI +S L I +P ++ + F + + A + + D S
Sbjct: 544 PAIKSQVKSPLLQTIFAE---IPQMLEPMHKFLNVLNESAARTGNKTELFKDLTDFPKIS 600
Query: 845 ACK-KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
A K +++E+ L HL + RK+L + + +Y ++ +L+EV SL VP D+ SS
Sbjct: 601 ARKLEIQEMLLKLEAHLGDIRKILKNPAASYTSVYGQEFLIEVKNSLGSVVPPDWITVSS 660
Query: 904 KKGFFRYWTPNIKKLLGELSQ 924
K R+ +P I + L+Q
Sbjct: 661 TKAVSRFHSPFIVENYRHLNQ 681
>gi|427791863|gb|JAA61383.1| Putative mismatch repair atpase msh6 muts family, partial
[Rhipicephalus pulchellus]
Length = 446
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 14/186 (7%)
Query: 299 RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFE 358
RRDA R + P TL++P F L+ +QWW+ K++H+D ++FFK+GKFYEL+
Sbjct: 268 RRDAAGRLATHPEFSPHTLFIPDSFKAKLTPAMRQWWDMKAEHLDVILFFKVGKFYELYH 327
Query: 359 MDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLE--LR 416
MDA +G +EL L +MKG+ H GFPE + E L KGY+V VEQTETP+ +E R
Sbjct: 328 MDAVIGVEELGLVFMKGDFAHSGFPEIAYGRYSEALILKGYKVARVEQTETPQMMEERCR 387
Query: 417 RKEKGSK-DKVVKREICAVVTKGTLT----EGELLSANPDASYLMALTESNQSPASQSTD 471
+ + SK D+VV+REIC + + T T +G+L NP+ SYL+A+ AS + D
Sbjct: 388 KMHRPSKFDRVVRREICRITCRATRTFGPQDGQL--CNPELSYLLAIVHGQ---ASANMD 442
Query: 472 RCFGIC 477
FGIC
Sbjct: 443 --FGIC 446
>gi|224128344|ref|XP_002320306.1| predicted protein [Populus trichocarpa]
gi|222861079|gb|EEE98621.1| predicted protein [Populus trichocarpa]
Length = 98
Score = 154 bits (389), Expect = 2e-34, Method: Composition-based stats.
Identities = 73/92 (79%), Positives = 83/92 (90%), Gaps = 2/92 (2%)
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK--GFFRYWTPNIKKLLGELSQAESEK 929
ITYVT+GK+ YLLEVPE LRGS+P+DYELRSSKK GF RYWTP+IKK LGELSQ ESEK
Sbjct: 1 ITYVTVGKEAYLLEVPEHLRGSIPQDYELRSSKKMQGFCRYWTPSIKKFLGELSQVESEK 60
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
ESALKSILQRLI FC++H+KWRQ+V+ATAGL
Sbjct: 61 ESALKSILQRLIVSFCKYHDKWRQLVSATAGL 92
>gi|403256359|ref|XP_003920848.1| PREDICTED: DNA mismatch repair protein Msh3 [Saimiri boliviensis
boliviensis]
Length = 1123
Score = 152 bits (385), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 151/652 (23%), Positives = 281/652 (43%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 222 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 281
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 282 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 337
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+N++ ++ F GI V AT ++ D
Sbjct: 338 DDAVNVDEVMTDTSTSYLLCISENNENVRDKNKGNVFIGIVGVQPATGEVVFDSFQDSAS 397
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + T E
Sbjct: 398 RSELETRMSSLQPVELLLPS-ALSKQTEMLIHRATSVSVRDDRIRVERM---DNTYFEYS 453
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T A + G + GI+ + V+ +L + YL+
Sbjct: 454 HAFQAVT--------EFYAKDTVDFKGSKIISGII-------NLEKSVICSLAAIIKYLR 498
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 499 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 551
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 552 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLHKLPDIERG 611
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 612 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHVQSDL 654
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L I+ +P ++S ++H+ + A + + D+ K+ EI+
Sbjct: 655 LRTIILE---IPELLSTVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVS 710
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
K HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ TP
Sbjct: 711 DKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHTP 770
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 771 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVDHLATIDCIF 822
>gi|146104291|ref|XP_001469786.1| putative mismatch repair protein MSH8 [Leishmania infantum JPCM5]
gi|134074156|emb|CAM72898.1| putative mismatch repair protein MSH8 [Leishmania infantum JPCM5]
Length = 1014
Score = 152 bits (384), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 186/743 (25%), Positives = 313/743 (42%), Gaps = 134/743 (18%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T+ +P +L ++ ++Q+W+ KSKH + VIFFK GKFYEL++ DA + +E L+ +
Sbjct: 29 PSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFGLKMV 88
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++++ +GY+V VEQ + E + + +K KVV
Sbjct: 89 LDTSNRGKMRLAGVPEQSYNEWARLFVYRGYKVGRVEQMKETES-----EAQAAKMKVVP 143
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVA------ 482
RE+ V+T GTL + +LS + + ++++L +P + VD++
Sbjct: 144 RELVEVLTPGTLKDPSMLSDHREV-FVLSL-----APVCSDGELVIDAFAVDLSRRVAHW 197
Query: 483 -----------------TSRIILGQ------VMDDLDCSVLCCLLSELRPVE-IIKPANM 518
+S + + + + D L LL +L P E II ++
Sbjct: 198 CTCGSGNKEAKTGCHAVSSELSIKRENGFYGSLKDSTLRALSALLQQLNPKEVIISSSDW 257
Query: 519 LSPETERAILRHTRNPLVNDLVPL--SEFWDAE---TTVLEIKNIYNRITAESLNKA--- 570
+S + ER R + +++ SE + E +T L ++ +TAE + +
Sbjct: 258 VSKDAER---RQAFKHICDEITKWTESEGFSVEHISSTALPSLSMSAMVTAEQVMASYFT 314
Query: 571 ----DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
S++A + L G++ DSG+ + G K S +D R
Sbjct: 315 FLCLASDIAIFSTATEYTAHLSGVIG-----ADSGTAASDTMLGGAASGKSSIMDYER-R 368
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
F K +VLDA + NLEV N G +L LN C T G+R
Sbjct: 369 FDK----------------GLVLDAATVSNLEVLTNLHDGSDKHSLNECLNRCSTNGGRR 412
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL------------EFR--KALSRLP- 731
L R+WL RP +S +I RQ+AV L N +L FR + LS
Sbjct: 413 LFRSWLLRPSASSRVIAARQEAVRFLARYNLLHSLRDMEVSEQAGEKRFRSNEGLSLFSS 472
Query: 732 ----DMERLLARLFASSEANGRNSNKVVLYEDAA---KKQLQEFISALHGCELMDQACSS 784
D ER L+RL + + +N + Y D KK L +S++ M
Sbjct: 473 VVFVDFERFLSRLSDIKQNDSQN----IAYVDPMVQYKKNLGIILSSVQALSAMVGWGKQ 528
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSIL-----------KHFKDAFDWVEANNSGRII 833
A Q G +PA++ L K + FD A SG +I
Sbjct: 529 FFAQCREVACEQ-------GTDIPALLGELLEEVTTAEASSKRIEGLFDRQAAEESGLLI 581
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPES-LR 891
P G YD+A K++ +E+ L ++ Q + + +GKDL+L+EV +
Sbjct: 582 PSPGTSSAYDAATAKLRHVESKLHDVRRQLQEDVFRGAQAHFADLGKDLFLIEVAVADAP 641
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
P R+ +Y +I+ L+ +A + K AL ++L + + C +++
Sbjct: 642 KMTPAGMVERARNAKSVKYVVSSIEALVETHKEATAMKAGALLTVLCSVASRIC---DEF 698
Query: 952 RQMVAATAGLTLI--LLDGSLLH 972
++ +A+ L+ I LL + LH
Sbjct: 699 PRLFSASRALSYIDCLLSLAQLH 721
>gi|398024318|ref|XP_003865320.1| mismatch repair protein MSH8, putative [Leishmania donovani]
gi|322503557|emb|CBZ38643.1| mismatch repair protein MSH8, putative [Leishmania donovani]
Length = 1014
Score = 152 bits (384), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 186/743 (25%), Positives = 313/743 (42%), Gaps = 134/743 (18%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T+ +P +L ++ ++Q+W+ KSKH + VIFFK GKFYEL++ DA + +E L+ +
Sbjct: 29 PSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFGLKMV 88
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++++ +GY+V VEQ + E + + +K KVV
Sbjct: 89 LDTSNRGKMRLAGVPEQSYNEWARLFVYRGYKVGRVEQMKETES-----EAQAAKMKVVP 143
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVA------ 482
RE+ V+T GTL + +LS + + ++++L +P + VD++
Sbjct: 144 RELVEVLTPGTLKDPSMLSDHREV-FVLSL-----APVCSDGELVIDAFAVDLSRRVAHW 197
Query: 483 -----------------TSRIILGQ------VMDDLDCSVLCCLLSELRPVE-IIKPANM 518
+S + + + + D L LL +L P E II ++
Sbjct: 198 CTCGSGNKEAKTGCHAVSSELSIKRENGFYGSLKDSTLRALSALLQQLNPKEVIISSSDW 257
Query: 519 LSPETERAILRHTRNPLVNDLVPL--SEFWDAE---TTVLEIKNIYNRITAESLNKA--- 570
+S + ER R + +++ SE + E +T L ++ +TAE + +
Sbjct: 258 VSKDAER---RQAFKHICDEITKWTESEGFSVEHISSTALPSLSMSAMVTAEQVMASYFT 314
Query: 571 ----DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
S++A + L G++ DSG+ + G K S +D R
Sbjct: 315 FLCLASDIAIFSTATEYTAHLSGVIG-----ADSGTAASDTMLGGAASGKSSIMDYEH-R 368
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
F K +VLDA + NLEV N G +L LN C T G+R
Sbjct: 369 FDK----------------GLVLDAATVSNLEVLTNLHDGSDKHSLNECLNRCSTNGGRR 412
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL------------EFR--KALSRLP- 731
L R+WL RP +S +I RQ+AV L N +L FR + LS
Sbjct: 413 LFRSWLLRPSASSRVIAARQEAVRFLARYNLLHSLRDMEVSEQAGEKRFRSNEGLSLFSS 472
Query: 732 ----DMERLLARLFASSEANGRNSNKVVLYEDAA---KKQLQEFISALHGCELMDQACSS 784
D ER L+RL + + +N + Y D KK L +S++ M
Sbjct: 473 VVFVDFERFLSRLSDIKQNDSQN----IAYVDPMVQYKKNLGIILSSVQALSAMVGWGKQ 528
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSIL-----------KHFKDAFDWVEANNSGRII 833
A Q G +PA++ L K + FD A SG +I
Sbjct: 529 FFAQCREVACEQ-------GTDIPALLGELLEEVTTAEASSKRIEGLFDRQAAEESGLLI 581
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPES-LR 891
P G YD+A K++ +E+ L ++ Q + + +GKDL+L+EV +
Sbjct: 582 PSPGTSSAYDAATAKLRHVESKLHDVRRQLQEDVFRGAQAHFADLGKDLFLIEVAVADAP 641
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
P R+ +Y +I+ L+ +A + K AL ++L + + C +++
Sbjct: 642 KMTPAGMVERARNAKSVKYVVSSIEALVETHKEATAMKAGALLTVLCSVASRIC---DEF 698
Query: 952 RQMVAATAGLTLI--LLDGSLLH 972
++ +A+ L+ I LL + LH
Sbjct: 699 PRLFSASRALSYIDCLLSLAQLH 721
>gi|288932103|ref|YP_003436163.1| DNA mismatch repair protein MutS [Ferroglobus placidus DSM 10642]
gi|288894351|gb|ADC65888.1| DNA mismatch repair protein MutS [Ferroglobus placidus DSM 10642]
Length = 820
Score = 151 bits (382), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 175/661 (26%), Positives = 280/661 (42%), Gaps = 148/661 (22%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH--CGFPE 384
L+ +Q++ K K+ D ++FF++G FYELF+ DA V +KEL + ++ H CG P
Sbjct: 5 LTPMMEQYYRIKQKYKDALLFFRVGDFYELFDDDARVASKELGIVLTSRDKKHAMCGVPH 64
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
++KL KGY+V + EQ E P + K+V+RE+ V+T GT+ E E
Sbjct: 65 HAAYSYIKKLIEKGYKVAICEQVEEP-----------TGKKLVRREVVRVITPGTVVEEE 113
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV--MDDLDCSVLCC 502
LL+ +++YLMAL + + + +DV+T + V +D+ C VL
Sbjct: 114 LLTT--ESNYLMALFKREK----------VALAFLDVSTGEFFVTSVKNVDEAICEVL-- 159
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE + P + E ++++ R RI
Sbjct: 160 ---KYSPVECLIPESFEEVEELEKLVKNVR----------------------------RI 188
Query: 563 TAESLNKADS-----NVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
E N S +VAN QA EL S ++L A G L Y K
Sbjct: 189 EDEQFNLKRSLEVLKDVANFQA------------LEL-----SEEEIL-ACGAVLNYAKN 230
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
S L F+K P + + YMVLD+ ++NLE+F N G GTL ++
Sbjct: 231 SLL------FSK----PALKLQKLERSEYMVLDSTTIKNLEIFRNLVDGGRRGTLLDVID 280
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERL 736
VTA G RLL+ WL RPL + I R DAV L+ + F R+ L + D+ER+
Sbjct: 281 KTVTAMGSRLLKKWLQRPLLDVTEIERRLDAVEELK--EKSFVRRVLRETLEDVYDLERI 338
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKK---------QLQEFISALHGCELMDQACSSL-G 786
+ RL E N +V +++ K Q ++ ++G M++ CS +
Sbjct: 339 ITRL----ELGKANPKDLVALKNSLKAVGKIKKFDFQSKKLRDLVYGMNPMEELCSLIEK 394
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
AI+E+ PA + KD G +I G D + D
Sbjct: 395 AIVEDP---------------PA------NVKD----------GGVIRE-GFDEELDELR 422
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD---LYLLEVPESLRGSVPRDYELRSS 903
K KE E + + + +RK T I + +G + Y +E+P+S ++PR Y + +
Sbjct: 423 KAKKEQEEFIKRLEERERK---RTGIDNLRVGYNNVFGYYIEIPKSKAKNLPRYYIRKQT 479
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
R+ P +K ++ E + I +R+ + H K + A L +
Sbjct: 480 LVNAERFTIPELKDREEKILAYEERIRILEQEIFERIRREVVRHAEKVKDSAERVAELDV 539
Query: 964 I 964
+
Sbjct: 540 L 540
>gi|443924145|gb|ELU43216.1| DNA mismatch repair protein msh6 [Rhizoctonia solani AG-1 IA]
Length = 1011
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 167/714 (23%), Positives = 293/714 (41%), Gaps = 167/714 (23%)
Query: 298 DRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELF 357
D++ R + DPRTL++P + + +KQ+WE K H D V+FF+ GKFYEL+
Sbjct: 237 DKKQKDGVRHAEEGSDPRTLWIPKGAWSSFTPFEKQFWEIKQNHFDTVLFFQKGKFYELY 296
Query: 358 EMDAHVGAKELDLQYM-KGEQPHCGFPERNFSM--------NVEKLARKGYRVLVVEQTE 408
E DA +G E DL+ + + G PE +F + ++ + GY+V V+Q E
Sbjct: 297 ENDAQIGHSEFDLKLTDRVKMKMVGVPESSFQVYIVCGSCSSLTLITSTGYKVGRVDQAE 356
Query: 409 TPEQLELRR------KEKGSK---DKVVKREICAVVTKGTLTEGELLSANPDASYLMALT 459
T E+R+ K KG+ DK+V+RE+ V+T GTL + ELL + A + +++
Sbjct: 357 TQLGAEMRQAANKGPKGKGAAAAGDKIVRRELNKVLTNGTLVDPELLQ-DEQAGHCISIR 415
Query: 460 ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS--ELRPVEIIKPAN 517
E+ + FGICV+D +T L DD+ + L LS R ++++ P+N
Sbjct: 416 ETEEEGE-------FGICVLDASTGEFNLSSFKDDIVRTKLEGNLSVATTRLMKVLLPSN 468
Query: 518 ML-SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
L +P ++ L + R T+ E+K +Y +++ D N +
Sbjct: 469 CLWTPLSKSEGLSYDR------------------TLEELKALYPPEPSDNDGMEDDNSWS 510
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
S +P + I + +LG ++YL++ +D+ +L F +
Sbjct: 511 SG--------VPDAIRSFIGN----ETAIESLGSMIWYLRQLNIDKDILTQKNFNV---- 554
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ + + + LD L ++EV NS G GTL L CVT F
Sbjct: 555 -YDPLQRGKGLALDGQTLSHIEVLVNSE-GTEEGTLLKLLGRCVTPF------------- 599
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+S +PD+ER+++R+ A S +
Sbjct: 600 ------------------------------VSGIPDLERIVSRVHAKSCS---------- 619
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH 816
+++F+ L E + + ++L + E+ E++ + +L L + +K
Sbjct: 620 --------IKDFLKVLSAFENLSKGLATLAEMSEDFENKSVLGLLRQAPDLKKNIKRVKS 671
Query: 817 FKDAFDWVEANNSGRIIPHG-GVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITY- 874
F + D + ++P VD Y ++K++E L K L + LG ++Y
Sbjct: 672 FFNVEDDL-------LVPSSDDVDEAYCEIQTEIKQLEEKLEKKLSGLKSDLGCKDLSYW 724
Query: 875 --VTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESA 932
T KD+Y++ P + + L +A +
Sbjct: 725 HSATGTKDIYIV---------------------------IPLLASTIRALKEARETRTGI 757
Query: 933 LKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
++ R+ +F + W + V TA + +L SL A L S SC E
Sbjct: 758 VRDFKLRVFAEFDADRDVWLRAVKVTAEMDCLL---SLAKASEALGSPSCRPEF 808
>gi|326432290|gb|EGD77860.1| hypothetical protein PTSG_12896 [Salpingoeca sp. ATCC 50818]
Length = 1199
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 160/674 (23%), Positives = 281/674 (41%), Gaps = 84/674 (12%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH--CGFPE 384
L+ ++Q+ + K KH + V+ ++G Y+ F DA + A L++ G P
Sbjct: 164 LTPLEQQFLDVKRKHPNSVLLVEVGYKYQFFGRDAEIAADVLNIFCASGHNNFKIASIPV 223
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
++V +L GY+V VV+QTET +K +K K R++ A+ TKGTL GE
Sbjct: 224 HRLFVHVRRLVDAGYKVGVVKQTETAAL----KKASANKSKPFTRKLAAMYTKGTLI-GE 278
Query: 445 LLSANP------DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ + YL L E + A ++T G+ V+ T +I + DD+ +
Sbjct: 279 DVDVGDDAADVNETGYLCCLCEDIKDEAGENTT--VGLVAVNCTTGDLIYDEFSDDVSRA 336
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L L+ + PVE++ P N+ S T R I + +D V D V ++
Sbjct: 337 ALDTRLAHISPVEVLLPKNLHS-RTARLI-----HAFHSDGVREERLSDDHFDVTRAASV 390
Query: 559 YNRITAESLNKADSNVAN--------SQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
++S + A A + I+S ++S +VL+ +
Sbjct: 391 ITDFFSDSPHTASPTAATPPSPSSKSTATTTSAAAKNATIVSTMLSLP---PRVLACMAA 447
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
L +LK L+ L + +G M+L+A L+NL+V +G G
Sbjct: 448 LLHHLKAFNLERVLALTSSLRRFTTTG-------REMILNACTLKNLDVLREQSTGSHQG 500
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRL 730
+L L+H T+FG+RLLR W+ARPL + I ERQ V Q A + R LS +
Sbjct: 501 SLLWLLDHTCTSFGRRLLRHWVARPLVSFTDIEERQRTVELFSSAFQTGADDLRSLLSGI 560
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
PD+ER L +++ + ++ ++ ++A + + E
Sbjct: 561 PDIERGLLTVYS---------------QRSSPREFHALVTA-------------MSRVRE 592
Query: 791 NTESRQLHHILTPGKGLPAIV-SILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
+ Q H +L L +V ++ + A ++V + +D+ D C +
Sbjct: 593 HFVMLQAHSVLKRSSLLSKLVETVCDALETATNYVGMMKKEAAEKNDKIDLLVD--CHHI 650
Query: 850 -----------KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
++ L H + + LG + Y + + YL+EVP S VP+D+
Sbjct: 651 FPTKRPLEEQLTTVKHELATHKRTICRTLGLNAFEYTCVSGEDYLIEVPRSRSSIVPKDW 710
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
S+ K RY + I + L ++Q + + ++ + F +++ R+ + A
Sbjct: 711 RTISATKQKVRYRSQFIHERLEVMAQCNEQLQIDAAEAWRKFMESFSASYDELRRGIKAL 770
Query: 959 AGLTLILLDGSLLH 972
A L +L SL H
Sbjct: 771 ATLDCLL---SLAH 781
>gi|432873486|ref|XP_004072240.1| PREDICTED: DNA mismatch repair protein Msh3-like [Oryzias latipes]
Length = 1090
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 160/646 (24%), Positives = 270/646 (41%), Gaps = 81/646 (12%)
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNVEKLARKGYRV 401
D ++ + G Y F DA + AKEL++ ++ C P ++V +L G++V
Sbjct: 210 DALLAVECGYKYRFFGDDAEIAAKELNITCHLDHNFMTCSIPSHRLFVHVRRLVSHGHKV 269
Query: 402 LVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL-----------------TEGE 444
VV+QTET + +++ + R++ A+ TK TL + G+
Sbjct: 270 GVVKQTETAAI----KASGANRNALFTRQLSALYTKSTLVGEDVNQICSLEDVDEGSHGD 325
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
++ PD S+L+ ++E+ Q T G+ V +T + L D S L +
Sbjct: 326 VMVDPPD-SFLLCISENWDKLRKQLT---VGLVAVQPSTGDVFLDCFPDGSSRSELESRI 381
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
++ PVEI+ P++ LS ET R +L T D + +E ++
Sbjct: 382 LKINPVEILVPSD-LSEETCRLLLSVTNGSFQAD----------DRARVERRDSAQFEYT 430
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
++N SQ E L S V+ LG + YL++ L+ L
Sbjct: 431 SAINTVTQFYCRSQQEDS---------RSLWRVASFESPVICCLGPLIQYLQEFNLERVL 481
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ F+ L C + M+L+A L NLE+ N G+L+ L+H T FG
Sbjct: 482 RSESSFQRLSC-------ESEAMILNAATLRNLEILNNQTDRGVRGSLFWVLDHSRTPFG 534
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
+RL+R W+++PL + I ERQDAV + + P + L RLPD+ER + ++
Sbjct: 535 RRLMRKWVSQPLTDLQRISERQDAVQEIMESDSPILDSVKSLLPRLPDLERGICSIYHK- 593
Query: 745 EANGRNSNKVVLYEDAAKKQLQEF-ISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
K QEF + + H L Q S + AI T S L +L
Sbjct: 594 -----------------KSSTQEFYLISSHLSRLGLQLQSWIPAIRSQTRSVLLRSVLLD 636
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
L A + + N + G + K++ + + + +HLK+
Sbjct: 637 TPDLLAPAHTFLNVLNEKAARSGNKTELFSDLSGFPV-LQERTKQIHFVLSEIQEHLKDI 695
Query: 864 RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELS 923
R +L ++ Y+T+ +L+EV SL +VP D+ SS K RY +P LL E
Sbjct: 696 RMVLKAPTLNYITVSGQEFLIEVKNSLSSTVPSDWVKISSTKAVGRYHSP----LLVERY 751
Query: 924 QAESEKESALKSILQR----LIGQFCEHHNKWRQMVAATAGLTLIL 965
+ + L QR + QF EH++ ++ ++ A + +
Sbjct: 752 KKLQQLREQLLLDCQREWTDFLDQFGEHYHTMKRAISHLATIDCLF 797
>gi|390459821|ref|XP_002744847.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Callithrix jacchus]
Length = 1126
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 162/654 (24%), Positives = 279/654 (42%), Gaps = 72/654 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + ++ + R++ A+ TK TL GE +
Sbjct: 283 RRLVAKGYKVGVVKQTETAA----LKAVGDNRSSLFSRKLTALYTKSTLI-GEDVNPLIK 337
Query: 447 ---SANPDA-------SYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDL 495
+ N DA SYL+ ++E+N++ + F GI V AT ++ D
Sbjct: 338 LDDAVNVDAIMTDTSTSYLLCISENNENVRDKKKGNVFIGIVGVQPATGEVVFDSFQDSA 397
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
S L +S L+PVE++ P LS +TE I R T + +D + + D T E
Sbjct: 398 SRSELETRMSSLQPVELLLPL-ALSKQTEMLIHRATSVSVRDDRIRVERMDD---TYFEY 453
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G + GI+ + V+ +L + YL
Sbjct: 454 SHAFQAVT--------EFYAKDTVDFKGSKIISGII-------NLEKPVICSLAAIIKYL 498
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L
Sbjct: 499 KEFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWV 551
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 552 LDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLHKLPDVER 611
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L ++ KV + E K +Q I S AI+ +S
Sbjct: 612 GLCSIY---------HKKVSVIEIYXKLAVQNLI----------HLKSDQYAIVPIIKSH 652
Query: 796 QLHHIL-TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
L +L T +P ++ ++H+ + A + + D+ K+ EI+
Sbjct: 653 VLAPMLRTIILEIPELLGPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQG 711
Query: 855 SLTK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
K HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+
Sbjct: 712 VSDKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFH 771
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+P I + L+Q + + + +F EH++ + V A + I
Sbjct: 772 SPFIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATIDCIF 825
>gi|348527286|ref|XP_003451150.1| PREDICTED: DNA mismatch repair protein Msh3-like [Oreochromis
niloticus]
Length = 1114
Score = 150 bits (378), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 164/659 (24%), Positives = 280/659 (42%), Gaps = 91/659 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
++Q + K +H D ++ + G Y F DA + AKEL++ ++ C P +
Sbjct: 222 EQQVIQLKQQHKDALLAVECGYKYRFFGEDAEIAAKELNIVCHLDHNFMTCSIPTHRLFV 281
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT-------- 441
+V +L G++V VV+QTET + +++ + R++ A+ TK TL
Sbjct: 282 HVRRLVSHGHKVGVVKQTETSAI----KASGANRNALFTRQLSALYTKSTLVGEDVNPVC 337
Query: 442 ------EG---ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
EG +++S PD S+L+ ++E+ + T G+ V +T ++L
Sbjct: 338 RLGDVEEGGCDDVVSDPPD-SFLICISENWDKLKKRLTA---GLVAVQPSTGDVLLDCFP 393
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTV 552
D S L C + ++ PVEI+ P++ LS +TER L++ + S D V
Sbjct: 394 DGPSRSELECRVLKINPVEILVPSD-LSEQTER---------LLHSITNASAQADDRVRV 443
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E ++ A ++N S ++QA+G L S S V+S LG +
Sbjct: 444 -ERRDSAEFEFASAMNTLTSFYCHTQAKGS---------RSLSSVASLESPVISCLGPLI 493
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
YL++ L+ L + F L C + M L A L NLE+ N G G+L
Sbjct: 494 QYLQEFNLERVLRSESSFRRLTC-------ESEIMTLSASTLRNLEILNNQTDGSVKGSL 546
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
L+H T FG+RL+R W+++PL + I ERQDAV + + R LSRLPD
Sbjct: 547 LWVLDHTRTPFGRRLMRKWVSQPLTDLQSISERQDAVQEILESDSLTLNSIRSLLSRLPD 606
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ER + ++ K QEF ++ + S LG L+
Sbjct: 607 LERGICSIYHK------------------KSSTQEFY-------VISSSLSRLGLELQTL 641
Query: 793 ESRQLHHIL----------TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
I TP + +PA S LK + ++ N +
Sbjct: 642 LPAMRSQISSVLLRSLLLDTPDQLIPA-QSFLKVLNE--KAAKSGNKTELFSDLSGFPVL 698
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
++++ + + H K+ R +L ++ Y T+ +L+EV S+ VP D+ S
Sbjct: 699 QERREQIQTVLREIQDHRKDIRLILKAPALEYTTVSGQEFLIEVKNSVSSIVPPDWVKIS 758
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
S K RY +P + +L Q + + + QF EH++ ++ ++ A +
Sbjct: 759 STKAVSRYHSPFLVDRYKKLQQLREQLMLDCQREWTNFLDQFGEHYHTMKRAISHLATM 817
>gi|126321607|ref|XP_001369923.1| PREDICTED: DNA mismatch repair protein Msh3-like [Monodelphis
domestica]
Length = 1236
Score = 149 bits (377), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 156/655 (23%), Positives = 279/655 (42%), Gaps = 77/655 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 306 QYLEMKEQHKDAILCIECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 365
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL----------- 440
+L KG++V VV+QTET L +K + R++ A+ TK TL
Sbjct: 366 RRLVAKGHKVGVVKQTETAALKALGE----NKSSLFTRKLTALYTKSTLIGEDVNPLIKL 421
Query: 441 ---TEGELLSANPDASYLMALTESNQS-PASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
E ++++ +YL+ + E+ ++ Q + GI V AT ++ D +
Sbjct: 422 DDPVNVEEIASDTSNNYLLCICENKENLKDKQKRNVTIGIVGVQPATGEVVFDSFQDSIS 481
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L + +L+PVE++ P+ M S TE+ I T + +D + + + E
Sbjct: 482 RSELETRILKLQPVELLLPSEM-SDHTEKFIKSVTSVSVRDDRIRIERM---DNLYFEYS 537
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + IT D + S GIL + V+S+L + YLK
Sbjct: 538 HAFQLITEFYAEVLDVKASQS---------FSGIL-------NLDKLVISSLAAIIRYLK 581
Query: 617 KSFLDETLLR---FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
+ L++ L F KF ++ +M ++ AL+NLE+ +N G+L
Sbjct: 582 EFNLEKMLYNPRNFKKFS----------SEMEFMTINGTALKNLEILQNQVDSKFRGSLL 631
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+H T FG+R L+ W+ +PL S I R DAV+ + + L +LPD+
Sbjct: 632 WVLDHTKTPFGRRKLKKWVTQPLLKSKEINARLDAVSEVLLSESSVLAHIQNHLCKLPDL 691
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER L ++ ++ + ++ + AL C L + + + AI +
Sbjct: 692 ERGLCSIY---------------HKKCSTQEFFIIVKAL--CHLKIEIQALIPAINSQVK 734
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L L +P ++ ++H+ + A + + D+ S + +EI+
Sbjct: 735 SDLLKKFLLE---IPELLDPVEHYFNILSEQAAKIGDKTELFKDLS-DFPSISTRKEEIQ 790
Query: 854 ---ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
A + HL+E R+LL + S+ Y T+ +L+EV SL S+P D+ S K R+
Sbjct: 791 MVTAKVNLHLQEIRRLLKNPSVHYKTVLGQEFLIEVKNSLTSSIPSDWVKIGSTKAVSRF 850
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+P I + L+Q + + + F EH++ + V A + I
Sbjct: 851 HSPFIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHYHSLCKAVHHLATIDCIF 905
>gi|345304732|ref|XP_001512218.2| PREDICTED: DNA mismatch repair protein Msh3 [Ornithorhynchus
anatinus]
Length = 1057
Score = 149 bits (375), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 158/654 (24%), Positives = 283/654 (43%), Gaps = 74/654 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 161 QFMEMKQQHKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 220
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL----------- 440
+L G++V VV+QTET + +K + R++ A+ TK TL
Sbjct: 221 RRLVANGHKVGVVKQTETAALKAIGE----NKSSLFTRKLTALYTKSTLIGEDVNPLTLD 276
Query: 441 --TEGELLSANPDASYLMALTES-NQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ E + + ++YL+ + E+ NQ F GI V AT ++ D
Sbjct: 277 DTVDVEDTAIDTSSNYLLCICENQNQENVKDKKGAIFIGIVGVQPATGEVVFDSFQDSGS 336
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L + ++PVE++ P++ LS ++E+ I R T + +D + + ++ E
Sbjct: 337 RSELETRILRMQPVELLLPSH-LSDQSEKCINRITSICVRDDRIRVERM---DSLHFEYS 392
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ +T E +K +V Q G GIL D V+ +L + YLK
Sbjct: 393 QAFQLMT-EFYSK---DVLGIQ----GPPSFSGIL-------DLDKPVICSLAAVIKYLK 437
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++TL F+ L ++ YM ++ L+NLE+ +N + G+L L
Sbjct: 438 EFNLEKTLYNTRNFKQLS-------SEMEYMTINGTTLKNLEILQNQTDLKTKGSLLWVL 490
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T FG+R L+ W+ +PL S I R DAV+ + + + L RLPD+ER
Sbjct: 491 DHTKTPFGRRRLKKWVTQPLLKSREINARLDAVSEVLLYESSMFGQLQNHLCRLPDLERG 550
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTESR 795
L ++ K QEF + C L + + AI N +S
Sbjct: 551 LCSIYHK------------------KCSTQEFYLIVKNLCRLKTEIQPLIPAIHSNVKSS 592
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKK---VKE 851
L + +P ++ ++++ + A + H D+ D+ S K+ +++
Sbjct: 593 LLRKLFLE---IPELLDPVEYYLKILNEQAAKTGDK--THLFQDLTDFPSIRKRKDEIQD 647
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ + + HL+E R++L + S YVT+ +++EV SL S+P D+ S K R+
Sbjct: 648 VTSQIHAHLQEIRRILKNPSAQYVTVSGQEFMIEVKNSLTSSIPSDWAKVGSTKAVSRFH 707
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+P I + L+Q + + + F EH++ + V A + I
Sbjct: 708 SPFIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHYHSLCKAVHHLATVDCIF 761
>gi|147852830|emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
Length = 1090
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 120/212 (56%), Gaps = 17/212 (8%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQK 332
N G+VS+ S KF +L P R RDA RRRPGD YD RTLY+PPD L+ +S QK
Sbjct: 226 NKNYGEVSDTTS-----KFEWLDPSRKRDANRRRPGDALYDKRTLYIPPDALQKMSASQK 280
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSM 389
Q+W K ++MD V+FFK+GKFYEL+E+DA +G KELD + G+ G E
Sbjct: 281 QYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDE 340
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
V+KL +GY+V +EQ ET EQ K +GS V++R++ VVT T +G +
Sbjct: 341 AVQKLIARGYKVGRMEQLETSEQ----AKARGSTS-VIQRKLVHVVTPSTACDGNI---G 392
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDV 481
PDA +L+++ E + C V +
Sbjct: 393 PDAVHLLSVKEVSPKEVIYENQGILTFCFVQL 424
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Query: 645 PYMV------LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYN 698
PY V +D L NLE+F N ++ GTLY L++CVT+ GKRLLR W+ PL +
Sbjct: 525 PYQVYSGCLRMDGQTLVNLEIFSN----NADGTLYKYLDNCVTSSGKRLLRNWICHPLKD 580
Query: 699 SGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
I R + V L + + + L +LPD+ERLL ++ AS +++
Sbjct: 581 VQGINNRLNVVEHLMTXTETMSF-IAQCLRKLPDLERLLGQVKASVQSSA 629
>gi|71020383|ref|XP_760422.1| hypothetical protein UM04275.1 [Ustilago maydis 521]
gi|74700862|sp|Q4P6I8.1|MSH3_USTMA RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|46100091|gb|EAK85324.1| hypothetical protein UM04275.1 [Ustilago maydis 521]
Length = 1154
Score = 149 bits (375), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 171/676 (25%), Positives = 288/676 (42%), Gaps = 81/676 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ E K++H ++ ++G + + DA + +KEL + C FPERN
Sbjct: 238 EKQILELKAEHPGVLLIIEVGYKLKFYGEDARIASKELSIM--------C-FPERNLLTA 288
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT- 439
++V++L + G++V VV Q ET L+ K + V R++ A+ T T
Sbjct: 289 MIPVHRLHIHVKRLIQAGHKVGVVRQIETRA---LKAASKNAYTPFV-RKLTALYTASTW 344
Query: 440 ---LTEGELLSANPDASY------LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
L+ + L+AN +Y LMA+ E ++ +Q+ GI V+V T + Q
Sbjct: 345 VDDLSSLDDLAANMGDAYTNQPKSLMAIVEQSERGNAQADRVSIGIVSVEVNTGHLTYDQ 404
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL-----VNDLVPLSEF 545
D S L ++ L P E++ P + P TE+ I N + L + ++
Sbjct: 405 FSDGHARSELETRIAHLAPAEVLIPPQLTKP-TEKVISYLLGNGADGGVRIERLAAMPDY 463
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
A +V Y ES + +E D + + L D S L
Sbjct: 464 NQAFQSV---TRFYRDRGLESPEVPEVPEVPGSSEADTTR----LATTLADGADKRSSPL 516
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFEL----LPCSGFGDMAKKPYMVLDAPALENLEVFE 661
+L +L L L + + F+L + F + + M+L++ L NLE+F
Sbjct: 517 ISLIVSLPQLSLIALAQIIQHLQAFQLESICTLSTNFRSFSSRTTMLLNSNTLANLEIFR 576
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
+ G+L L+ C +A G+RLLR W++RPL + ++ER DAV LR
Sbjct: 577 TANEQTERGSLIWLLDKCKSAMGRRLLRKWVSRPLTDIDKLQERLDAVEALRDGKSYVLR 636
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQA 781
L LPD+ER LAR+ Y A +L + +L+ + +
Sbjct: 637 RLDSVLHGLPDLERGLARM---------------TYGRATPTELATVLLSLN--RVTQEF 679
Query: 782 CSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
+ A + S H+L+ G + + L + ANN + +D D
Sbjct: 680 KADEAATWKTQSSLIDTHLLSLASGKQVVQTYLNQI--SIKEARANNKADLY----LDAD 733
Query: 842 YDSACKKVKE----IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
A + K+ I+ L +HL+E RKLL S+ YV++ YL+EV + VP +
Sbjct: 734 VFPAIQASKDNMAIIDGELREHLREIRKLLHRPSLDYVSVAGVDYLVEVRVADAKKVPVE 793
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE-HHNKWRQMVA 956
+ S+ K R+ TP + +L Q + ++A + R + + C+ + R +VA
Sbjct: 794 WLRVSATKSMVRFHTPEVMRLSKIRDQHKETLDAAAQEAFARFVRELCKSEYVVLRNVVA 853
Query: 957 ATAGLTLILLDGSLLH 972
+ A L ++L SL H
Sbjct: 854 SLAVLDVLL---SLAH 866
>gi|311249783|ref|XP_003123799.1| PREDICTED: DNA mismatch repair protein Msh3 [Sus scrofa]
Length = 1094
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 152/657 (23%), Positives = 279/657 (42%), Gaps = 80/657 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K V R++ A+ TK TL ++
Sbjct: 283 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLIGEDVNPLVKL 338
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD--- 493
+ + SYL+ L E+ ++ + F GI V AT ++ D
Sbjct: 339 DDAVNVDEIMTDTSTSYLLCLCENKENVKDRKKGNIFIGIVGVQPATGEVVFDSFQDSAS 398
Query: 494 --DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+L+ +LC L+PVE++ P+++ P TE I R T + +D +
Sbjct: 399 RSELETRILC-----LQPVELLLPSDLSEP-TEMLIHRATAVSVRDDRI----------R 442
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
V + N+Y + + + A + G L GI+ V+ +L
Sbjct: 443 VERMDNMYFEY-SHAFQEVTEFYAKDIVDNKGSQSLSGIIK-------LEKPVICSLAAI 494
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N + G+
Sbjct: 495 IRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDMKTKGS 547
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L+ L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LP
Sbjct: 548 LFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVVHSESSVFGQIESHLRKLP 607
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER L ++ ++ + ++ + L+ + QA + A+ +
Sbjct: 608 DIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IPAVNSH 650
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--- 848
+S L L +P ++S ++H+ + A N + + D+ K+
Sbjct: 651 VQSNLLQTCLLE---IPELLSPVEHYLKILNEQAAKNGDKTELFKDLS-DFPVIKKRKDE 706
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++E+ + HL+E RK+L + S YVT+ +++EV S +P D+ S K
Sbjct: 707 IQEVTNKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPTDWVKVGSTKAVS 766
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ +P I + L+Q + + + F EH++ + V A I
Sbjct: 767 RFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSEHYHSLCKAVHHLATADCIF 823
>gi|300088042|ref|YP_003758564.1| DNA mismatch repair protein MutS [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527775|gb|ADJ26243.1| DNA mismatch repair protein MutS [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 852
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 155/628 (24%), Positives = 265/628 (42%), Gaps = 117/628 (18%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPE 384
+ Q+ K ++ + ++FF++G FYE F+ DA A+EL++ E P G P
Sbjct: 10 RSQYLSIKRRYPEAIVFFRLGDFYETFDTDAETTARELEIVLTAREMGKGVKVPMAGIPY 69
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +L +G++V + EQT P G + +V+RE+ +VT GT+ E
Sbjct: 70 HAVDNYLARLIARGHKVAICEQTTRP----------GDQKGLVEREVVRMVTPGTVIEPN 119
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
LL + +YL A+T + D G+ VD++T +L + L L
Sbjct: 120 LLDGRRN-NYLAAVT---------ADDETAGLAYVDISTGEF----AATELPRARLSAEL 165
Query: 505 SELRPVEIIKPAN-MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+P EI+ N P+ +P S D E +
Sbjct: 166 ERLQPAEILLAENGSFQPDGG---------------IPASRLPDRE---------FEPEP 201
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
A L K + VA EG GL LP ++TG +G+ V YLK++
Sbjct: 202 AAELLKNELGVAT--LEGFGLDSLP------LATGSAGAVVA--------YLKQT----- 240
Query: 624 LLRFAKFELLPCSGFGDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
E++ G + + +M LD + NLE+F N+ +G+++G+L L+ VT
Sbjct: 241 -----HKEVISSLGHPSVYRTAEFMALDDNTVTNLEIFRNATTGETAGSLLGVLDVTVTT 295
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLLR WL +PL + IR+RQD+VA L + A + R L D+ER++ R+ A
Sbjct: 296 MGARLLRRWLGQPLLEAETIRKRQDSVAWLYHRHAERA-DIRHLLKGFADLERVINRVRA 354
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ Q +E I+ L+ + +LG ++ + + H L
Sbjct: 355 FT------------------AQPREIIALKRSLALLPKLVRALG---DDPATADIRHGL- 392
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL-- 860
K L +VS+++ +E +G + G + + + +++++ A H+
Sbjct: 393 --KDLSVVVSLIE------TALENEPTGNVGEGGIIRRGFSAELDELRDLAAGAKSHIAR 444
Query: 861 --KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
E+R G S+ Y LEV + VP + + + RY TP +K+
Sbjct: 445 LEAEERSATGIKSLKAGYNHVFGYYLEVSSANLSQVPERFIRKQTLANAERYITPELKEY 504
Query: 919 LGELSQAESEKESALKSILQRLIGQFCE 946
+ + E+ I +R++GQ E
Sbjct: 505 EARILSSRERLEATESDIYRRVLGQIAE 532
>gi|332224846|ref|XP_003261579.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Nomascus leucogenys]
Length = 1125
Score = 146 bits (369), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 280/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYIEMKQQHRDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 283 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTAIYTKSTLIGEDVNPLIKL 338
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 339 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 398
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE + R T + +D + V +
Sbjct: 399 RSELETRMSSLQPVELLLPS-ALSEQTEALVHRATSVSVQDDRI----------RVERMD 447
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 448 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 499
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 500 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 552
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 553 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 612
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 613 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 655
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L I+ +P ++S ++H+ + A + + D+ S K+ EI+ +
Sbjct: 656 LRTIILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPSIKKRKDEIQGVI 711
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E R++L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 712 DEIRMHLQEIRRILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 771
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 772 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 823
>gi|355750038|gb|EHH54376.1| hypothetical protein EGM_15199, partial [Macaca fascicularis]
Length = 1121
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 150/651 (23%), Positives = 278/651 (42%), Gaps = 69/651 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 221 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 280
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++L D
Sbjct: 281 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDILFGQLD 336
Query: 452 -------------ASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLDC 497
SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 337 DAVNVDEIMTDTSTSYLLCISENKENVRDKKKGIVFIGIVGVQPATGEVVFDSFQDSASR 396
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
S L +S L+PVE++ P+ LS +TE I R T + +D + V + N
Sbjct: 397 SELETRMSNLQPVELLLPS-ALSEQTEMLIHRATSVSVQDDRI----------RVERMDN 445
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
IY + + A + G + GI+ + V+ +L + YLK+
Sbjct: 446 IYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLKE 497
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
L++ L + F+ L +K +M ++ L NLE+ +N + G+L L+
Sbjct: 498 FNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVLD 550
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER L
Sbjct: 551 HTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERGL 610
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
++ ++ + ++ + L+ + QA + A+ + +S L
Sbjct: 611 CSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHVQSDLL 653
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA--- 854
++ +P ++S ++H+ + A + + D+ K+ EI+
Sbjct: 654 RTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVSD 709
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 710 KIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSPF 769
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ + L+Q + + + +F EH++ + V A + I
Sbjct: 770 VVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHYLCKAVHHLATVDCIF 820
>gi|284162159|ref|YP_003400782.1| DNA mismatch repair protein MutS [Archaeoglobus profundus DSM 5631]
gi|284012156|gb|ADB58109.1| DNA mismatch repair protein MutS [Archaeoglobus profundus DSM 5631]
Length = 817
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 156/611 (25%), Positives = 274/611 (44%), Gaps = 132/611 (21%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH--CG 381
+ L+ +Q++ K ++ D ++FF++G FYELF+ DA + ++EL + ++ H G
Sbjct: 1 MEELTPMMRQYYRIKERYKDALLFFRVGDFYELFDEDAKIASQELGIVLTSRDKKHPMAG 60
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P +++L KGY+V + EQ E P K KG +V+RE+ V+T GTL
Sbjct: 61 VPHHAVFPYIKRLIEKGYKVAICEQVEDPS------KAKG----LVRREVVRVITPGTLI 110
Query: 442 EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLC 501
E ELL+ + +YLM++ + R +GI ++DV+T L ++ D +
Sbjct: 111 EEELLT--KENNYLMSIYKG----------RIYGIALIDVSTGE-FLTTALESFDEVI-- 155
Query: 502 CLLSELRPVEIIK--PANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
E++K PA + PE F + E E+K
Sbjct: 156 --------AEVLKFSPAECIVPEG---------------------FEELE----ELKKHV 182
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS---GSQVLSALGGTLFYLK 616
N +L++ + + S IL E + + + + A G L Y+K
Sbjct: 183 N--VVHTLSQDEYSFKESLE----------ILKECVQDFERLELEEECVRACGSALRYVK 230
Query: 617 KSFLDETL-LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+S L +T+ +R K+ + YM+LD+ L+NLEVF N G GTL
Sbjct: 231 ESLLIKTMKIRLQKY-----------VSRDYMILDSTTLKNLEVFRNLIDGSRRGTLIDV 279
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDME 734
L+ TA G RLL+ WL RPL N I +R +AV L + F + R+ L + D+E
Sbjct: 280 LDKTATAMGSRLLKRWLQRPLLNVDEIEKRLEAVEEL--FEKSFLRQSLREVLREVYDLE 337
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
R+++R+ E N+ +V +++ K A + + N S
Sbjct: 338 RIVSRI----EYRKANARDLVALKNSLK------------------AVEKIKSFTFN--S 373
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIE 853
R+L I+ +GL A+ +++ ++A +N I GG+ D Y +++ I+
Sbjct: 374 RRLKEIV---EGLKALRDVVELIENAI----VDNPPINIKDGGIIRDGYSRELDELRRIK 426
Query: 854 A---SLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
+ K+++E+ + T I + +G + Y +EVP+S VP+ Y+ + +
Sbjct: 427 VDHENFIKNIEERER--KATGIDKLKVGYNTVIGYYIEVPKSKLRFVPKHYKRKQTLVNA 484
Query: 908 FRYWTPNIKKL 918
R+ P ++ +
Sbjct: 485 ERFTIPELEDI 495
>gi|332982487|ref|YP_004463928.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
gi|332700165|gb|AEE97106.1| DNA mismatch repair protein MutS [Mahella australiensis 50-1 BON]
Length = 882
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 172/672 (25%), Positives = 289/672 (43%), Gaps = 151/672 (22%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ +L+ +Q+ + K ++ D ++FF++G FYE+F DA + +KEL+L M+
Sbjct: 1 MASLTPMMQQYLQLKERYKDCLLFFRLGDFYEMFFDDAVLASKELELTLTGRDCGMEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + +L KGY+V + EQ E P KG +V+R++ ++T
Sbjct: 61 PMCGVPYHAVDTYIARLVEKGYKVAICEQMEDPAL------AKG----LVERDVIRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+T+G +L + +YL+ A + D C GI VD++T R + Q L
Sbjct: 111 GTITDGSMLDEKEN-NYLLC--------AHVNGDNC-GIAFVDISTGRCSITQ----LQT 156
Query: 498 SVLCCLLSELRPVEIIK------PANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+ L L+ ++P E++ A ML +R ++ + D V D
Sbjct: 157 AGLADELARIQPAEMMANEPFFDQAGMLKTVQQRLDIKPGHCSVEFDDV------DKAYA 210
Query: 552 VLEIK---NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+LE ++ + ++ E + +A + L ++S LI T + L+ +
Sbjct: 211 MLEANMSADVLDYVSKEEMPQA-------------VCALASLISYLIETQKTA---LANI 254
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
GG Y + YM+LDA NLE+ E RSG
Sbjct: 255 GGIEVY---------------------------HIQQYMILDAATRRNLELCETMRSGSH 287
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKAL 727
GTL L+H TA G R+L++W+ +PL N + ERQ+AV + NQP + + ++AL
Sbjct: 288 KGTLMWVLDHTSTAMGGRMLKSWIEQPLLNINALNERQEAVEAM--ANQPLWKDDIKEAL 345
Query: 728 SRLPDMERLLAR----------LFASSEANGR--NSNKVVLYEDAAK-KQLQEFISALHG 774
S + D+ERL+++ L A ++ GR N++ L AA+ K L + I +
Sbjct: 346 SGIYDIERLMSKAVYGNINARDLIALKQSLGRLPRLNELALQGKAARLKTLGQRIDVMDD 405
Query: 775 C-ELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII 833
L+D+A + P P V KD +D ++ + R I
Sbjct: 406 IYTLIDKAIAD-----------------DP----PLSVKDGNIIKDGYD--QSVDELRDI 442
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESL 890
H G L++Q + T I + +G + Y +EV +S
Sbjct: 443 SHNG----------------RQWISRLEQQER--DRTGIKSLKVGYNKVFGYYIEVTKSY 484
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHN 949
VP DY + + RY TP +K++ ++ A SE+ AL+ I + H
Sbjct: 485 YDMVPADYIRKQTLANAERYITPELKEMENKILSA-SERLVALEYQIFADIRDTVVGHIK 543
Query: 950 KWRQMVAATAGL 961
+ +Q +A A L
Sbjct: 544 RVQQTASAIAEL 555
>gi|395511357|ref|XP_003759926.1| PREDICTED: DNA mismatch repair protein Msh3 [Sarcophilus harrisii]
Length = 1038
Score = 145 bits (366), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 153/652 (23%), Positives = 278/652 (42%), Gaps = 71/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 144 QYLEMKEQHKDAILCIECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 203
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL----------- 440
+L KG++V VV+QTET + +K + R++ A+ TK TL
Sbjct: 204 RRLVAKGHKVGVVKQTETAALKAIGE----NKSSLFTRKLTALYTKSTLIGEDVNPLIKL 259
Query: 441 ---TEGELLSANPDASYLMALTESNQSPA-SQSTDRCFGICVVDVATSRIILGQVMDDLD 496
E ++++ +YL+ + E+ ++ Q + GI V T ++ D +
Sbjct: 260 DDPVNVEEITSDTSNNYLLCICENKENMKDKQKGNITIGIVGVQPTTGEVVFDSFQDSVS 319
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S+L+PVE++ P+ M S TER I T + +D + + + E
Sbjct: 320 RSELETRISKLQPVELLLPSEM-SDHTERFIRSITSVSVQDDRIRVERM---DNLYFEYS 375
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +IT D + S GIL + V+ +L + YLK
Sbjct: 376 HAFQQITEFYAEVLDIKASQS---------FSGIL-------NLDKPVICSLAAVIRYLK 419
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + L ++ +M ++ AL+NLE+ +N G+L L
Sbjct: 420 EFNLEKMLHNPRNLKKLS-------SELEFMTINGTALKNLEILQNQTDSKFRGSLLWVL 472
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T FG+R L+ W+ +PL S I R DAV+ + + L +LPD+ER
Sbjct: 473 DHTKTPFGRRKLKKWVTQPLLKSREINARLDAVSEIILSESSVFGHIQNHLCKLPDIERG 532
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + AL C L + + + AI +S
Sbjct: 533 LCSIY---------------HKKCSTQEFFLIVKAL--CHLKREIQALIPAITSQIKSDL 575
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L L +P ++ ++H+ + + A + + D+ S K+ +EI+
Sbjct: 576 LKQFLLE---IPEHLNPVEHYFNILNEQAAKIGDKTELFKDL-TDFPSISKRKEEIQVVT 631
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
TK HL+E R++L S + T+ +L+EV SL S+P D+ S K R+ +P
Sbjct: 632 TKINLHLQEIRRILKSPSAHFKTVLGQEFLIEVKNSLVSSIPSDWVKIGSTKAVSRFHSP 691
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + F EH++ + V A + I
Sbjct: 692 FIVENYRHLNQLREQLVLDCNTEWLNFLDHFSEHYHSLCKAVHHLATVDCIF 743
>gi|443734709|gb|ELU18590.1| hypothetical protein CAPTEDRAFT_214274 [Capitella teleta]
Length = 440
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 131/260 (50%), Gaps = 25/260 (9%)
Query: 173 KKVVVED--DEEMENVEDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRG 230
K+ ++E+ DE++ ED+ DSS DD ++ V E E D E E+ V +
Sbjct: 181 KRRIIENNSDEDLSESEDDFKPGIIDSSSDDESEAV------ESSEPDTASESESPVKQK 234
Query: 231 RKRKSSGVKKSKSDGNAVNADFKSPIIKP------VKIFGSDKLSN--GFDNPVMGDVSE 282
RKR + F +P KP G +S F P D
Sbjct: 235 RKRNHDSQPSPMLKPSRTLQSFMTPSPKPNSEKPFTPSVGDRTISKLAAFSAP---DTPS 291
Query: 283 RFSAREADKF-----HFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWE 336
SA + + FL P++ RDA++R YD RT+Y+P FL + +QWW+
Sbjct: 292 TPSAEDGRVYPHMTEDFLQPEKMRDAEKRTRDHPEYDARTIYVPDAFLNKQTPAMRQWWQ 351
Query: 337 FKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLAR 396
K+KH D ++FFKMGKFYELF MDA + EL L YMKGEQ H GFPE + E L +
Sbjct: 352 LKAKHFDTILFFKMGKFYELFHMDATIAVNELGLIYMKGEQAHAGFPEIAYGRYAETLIQ 411
Query: 397 KGYRVLVVEQTETPEQLELR 416
KGY+V +EQTETP+ ++ R
Sbjct: 412 KGYKVGRIEQTETPDMVQER 431
>gi|258515354|ref|YP_003191576.1| DNA mismatch repair protein MutS [Desulfotomaculum acetoxidans DSM
771]
gi|257779059|gb|ACV62953.1| DNA mismatch repair protein MutS [Desulfotomaculum acetoxidans DSM
771]
Length = 897
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 160/605 (26%), Positives = 255/605 (42%), Gaps = 119/605 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
KQ+ + K +H D ++FF++G FYE+F DAH ++ELD+ E P CG P
Sbjct: 8 KQYLQIKERHTDAILFFRLGDFYEMFFEDAHCASRELDITLTGREGGREERIPMCGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY+V + EQ E P+ + KG +V+RE+ V+T GT+ G
Sbjct: 68 AAEGYIARLVEKGYKVAICEQVEDPKAV------KG----IVRREVVRVITPGTILSGSF 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +++++++ + +G+ VVD+ T ++ + +D + L +S
Sbjct: 118 IEDKRN-NFIISVSREKEH---------YGLAVVDLGTGLFMVTEFA--IDDTALAEEIS 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L+P E + + S I N ++ PL F T K++ + I E
Sbjct: 166 RLQPSEAVVARDSFSKSELGIIFSGIFNITISQQ-PLDFF----TFTQAYKSLVDNIGEE 220
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
L + N E C A GG L YLK++
Sbjct: 221 KLTE------NKLLEMTAAVC--------------------AAGGLLTYLKET------- 247
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K L + +MVLDA +NLE+ ++ R G G+L L+ VTA G
Sbjct: 248 --QKTALQHLNAITVYKPSRFMVLDATTRKNLELTKSLREGTKWGSLLWVLDRTVTAMGG 305
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLARL-FAS 743
RLL+ WL +PL ++ I R DAVA L + F + ++ LS+L D+ERL R+ + +
Sbjct: 306 RLLKNWLEQPLLSAAKINLRLDAVAEL--IKDGFIRYDLKEILSKLYDLERLTGRIAYGT 363
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
+ A N+ KV L A Q++E IL T S L
Sbjct: 364 AGARDLNAIKVSL---AVLPQIKE--------------------ILARTSSVLLSK---- 396
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-------DMDY-DSACKKVKEIEAS 855
L + IL D + +N + GG+ +DY SA K K A
Sbjct: 397 ---LSEQIEILDELYDLLERAVIDNPPVSVREGGMIKTGFNEKVDYLRSAGKDAKNWVAE 453
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
+ +E+ T I + +G + Y LEV +S VP +Y + + RY T
Sbjct: 454 MEARERER------TGIKSLKVGFNKVFGYYLEVTKSNIHLVPEEYIRKQTLANAERYIT 507
Query: 913 PNIKK 917
P +K+
Sbjct: 508 PQLKE 512
>gi|120660058|gb|AAI30437.1| MutS homolog 3 (E. coli) [Homo sapiens]
Length = 1137
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 283/652 (43%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRIRVERM---DNIYFEYS 466
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K ++ SQ I+S +++ V+ +L + YLK
Sbjct: 467 HAFQAVT-EFYAKDTVDIKGSQ-----------IISGIVNLEKP---VICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 835
>gi|284813531|ref|NP_002430.3| DNA mismatch repair protein Msh3 [Homo sapiens]
gi|317373576|sp|P20585.4|MSH3_HUMAN RecName: Full=DNA mismatch repair protein Msh3; Short=hMSH3;
AltName: Full=Divergent upstream protein; Short=DUP;
AltName: Full=Mismatch repair protein 1; Short=MRP1
Length = 1137
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 283/652 (43%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRIRVERM---DNIYFEYS 466
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K ++ SQ I+S +++ V+ +L + YLK
Sbjct: 467 HAFQAVT-EFYAKDTVDIKGSQ-----------IISGIVNLEKP---VICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 835
>gi|30089006|gb|AAP13535.1| mutS homolog 3 (E. coli) [Homo sapiens]
Length = 1140
Score = 144 bits (364), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 283/652 (43%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 238 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 297
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 298 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 353
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 354 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 413
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 414 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRIRVERM---DNIYFEYS 469
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K ++ SQ I+S +++ V+ +L + YLK
Sbjct: 470 HAFQAVT-EFYAKDTVDIKGSQ-----------IISGIVNLEKP---VICSLAAIIKYLK 514
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 515 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 567
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 568 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 627
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 628 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 670
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 671 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 726
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 727 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 786
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 787 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 838
>gi|40225466|gb|AAH11817.1| MSH3 protein, partial [Homo sapiens]
Length = 848
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 279/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 226 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAALKAI----GDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 342 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 401
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 402 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 450
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 451 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 502
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 503 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 555
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 556 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 615
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 616 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 658
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 659 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 714
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 715 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 774
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 775 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 826
>gi|426384231|ref|XP_004058675.1| PREDICTED: DNA mismatch repair protein Msh3 [Gorilla gorilla
gorilla]
Length = 1128
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 279/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 226 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 342 DDAVNVDEIMTDTSTSYLLCISENKENIRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 401
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 402 RSELETRMSSLQPVELLLPS-ALSEQTETLIHRATSVSVQDDRI----------RVERMD 450
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 451 NIYFEY-SHAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 502
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 503 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 555
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 556 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 615
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 616 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 658
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 659 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 714
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 715 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 774
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 775 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 826
>gi|426230068|ref|XP_004009104.1| PREDICTED: DNA mismatch repair protein Msh3 [Ovis aries]
Length = 1119
Score = 144 bits (363), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 161/722 (22%), Positives = 308/722 (42%), Gaps = 97/722 (13%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKR------RRPGDVYYDPRTLYLPPDFLRNL 327
N V + S+ ++++ KF GP +R + +P + +++Y P +
Sbjct: 168 NAVSSEDSKSQTSQKDKKFSHFGPSQRSYENLQKTSDSKPSN--KRTKSIYTPLEL---- 221
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERN 386
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P
Sbjct: 222 -----QYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHR 276
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL- 445
++V +L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 277 LFVHVRRLVAKGYKVGVVKQTETAA----LKAIGDNKSSLFSRKLTALYTKSTLIGEDVN 332
Query: 446 -------------LSANPDASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQV 491
+ + SYL+ + E+ ++ + + GI V AT ++
Sbjct: 333 PLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKKGNVSIGIVGVQPATGEVVFDSF 392
Query: 492 MD-----DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
D +L+ +LC L+PVE++ P++ LS +TE I R T + +D + +
Sbjct: 393 QDSASRSELETRILC-----LQPVELLLPSD-LSEQTETLIHRVTAMSVRDDRIRVERM- 445
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+ E + + +T E K ++ +SQ+ S++I+ V+
Sbjct: 446 --KNVYFEYSHAFQEVT-EFYAKDVVDIKDSQS-----------FSDIINLEKP---VIC 488
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
+L + YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N
Sbjct: 489 SLAAIIRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDM 541
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
+ G+L+ L+H T+FG+R L+ W+ +PL I R DAV+ + +
Sbjct: 542 KTKGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENH 601
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L +LPD+ER L ++ ++ + ++ + L+ + QA +
Sbjct: 602 LRKLPDIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IP 644
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ + ES L + +P ++S ++H+ + A + + D+
Sbjct: 645 VVNSHVESELLQTFILE---IPELLSPVEHYLKILNEQAAKTGDKTELFKDLS-DFPLIK 700
Query: 847 KKVKEIEASLTK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
K+ EI+ K HL+E RK+L + S YVT+ +++EV S +P D+ S
Sbjct: 701 KRKDEIQDVTNKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPTDWVKVGS 760
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
K R+ +P I + L+Q + + + F EH++ + V A +
Sbjct: 761 TKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFSEHYHTLCKAVHHLATIDC 820
Query: 964 IL 965
I
Sbjct: 821 IF 822
>gi|395825567|ref|XP_003785999.1| PREDICTED: DNA mismatch repair protein Msh3 [Otolemur garnettii]
Length = 1126
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 143/611 (23%), Positives = 265/611 (43%), Gaps = 70/611 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 224 QYIELKQQHKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 283
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 284 RRLVAKGYKVGVVKQTETAA----LKAIGDNKSSLFSRKLTALYTKSTLIGEDVNPLIKL 339
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + YL+ + E+ ++ + F GI V AT ++ D
Sbjct: 340 DDAVNVDEIVTDTSTGYLLCICENKENVKDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 399
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 400 RSELETRISCLQPVELLLPS-ALSEQTETLIHRATAVSVRDDRI----------RVERMD 448
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
N+Y + + A + G + GI+ + V+ +L + YLK
Sbjct: 449 NVYFEYS-HAFQAVMEFYAKDVVDIKGSQSISGII-------NLTKPVICSLASLIRYLK 500
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L ++K +M ++ L NLE+ +N + G+L L
Sbjct: 501 EFNLEKVLSKPENFKQLS-------SEKEFMTINGTTLRNLEILQNQTDMKTRGSLLWVL 553
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H TAFG+R L++W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 554 DHTKTAFGRRKLKSWVTQPLLKLREINARLDAVSEVLHSESGVFGQIENHLRKLPDIERG 613
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + LH + QA + A+ + +S
Sbjct: 614 LCSIY---------------HKKCSTQEFFLIVKTLHHLKSEFQAL--IPAVNSHIQSDL 656
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKEIE 853
L ++ +P ++S ++H+ + A + + D+ K+ ++E+
Sbjct: 657 LRTVILE---IPELLSPVEHYLKILNEQAAKIGDKTELFQDLS-DFPLIKKRKDEIQEVT 712
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S VP D+ S K R+ +P
Sbjct: 713 DKIRIHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCVPTDWVKVGSTKAVSRFHSP 772
Query: 914 NIKKLLGELSQ 924
I + L+Q
Sbjct: 773 FIVENYRHLNQ 783
>gi|410297266|gb|JAA27233.1| mutS homolog 3 [Pan troglodytes]
Length = 1131
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 283/652 (43%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 229 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 288
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 289 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 344
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 345 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 404
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 405 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRIRVERM---DNIYFEYS 460
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K ++ SQ I+S +++ V+ +L + YLK
Sbjct: 461 HAFQAVT-EFYAKDTVDIKGSQ-----------IISGIVNLEKP---VICSLAAIIKYLK 505
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 506 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 558
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 559 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 618
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 619 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 661
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 662 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 717
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 718 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 777
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 778 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 829
>gi|158260735|dbj|BAF82545.1| unnamed protein product [Homo sapiens]
Length = 1128
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 279/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 226 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 342 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 401
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 402 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 450
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 451 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 502
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 503 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 555
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 556 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 615
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 616 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 658
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 659 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 714
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 715 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 774
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 775 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 826
>gi|397503403|ref|XP_003822314.1| PREDICTED: DNA mismatch repair protein Msh3 [Pan paniscus]
Length = 1131
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 279/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 229 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 288
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 289 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 344
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 345 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 404
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 405 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 453
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 454 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 505
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 506 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 558
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 559 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 618
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 619 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 661
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 662 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 717
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 718 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 777
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 778 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 829
>gi|120660370|gb|AAI30435.1| MutS homolog 3 (E. coli) [Homo sapiens]
Length = 1137
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 279/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 459
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 460 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 835
>gi|1490521|gb|AAB06045.1| hMSH3 [Homo sapiens]
gi|119616268|gb|EAW95862.1| mutS homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
Length = 1128
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 283/652 (43%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 226 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 342 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 401
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 402 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRIRVERM---DNIYFEYS 457
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K ++ SQ I+S +++ V+ +L + YLK
Sbjct: 458 HAFQAVT-EFYAKDTVDIKGSQ-----------IISGIVNLEKP---VICSLAAIIKYLK 502
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 503 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 555
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 556 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 615
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 616 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 658
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 659 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 714
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 715 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 774
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 775 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 826
>gi|261414600|ref|YP_003248283.1| DNA mismatch repair protein MutS [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371056|gb|ACX73801.1| DNA mismatch repair protein MutS [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 879
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 169/645 (26%), Positives = 258/645 (40%), Gaps = 109/645 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q++E K ++ ++FF+MG F+ELFE DA + +K L L G P CGFP
Sbjct: 8 QQYYEIKKENPGCILFFRMGDFFELFEDDAVIASKILGLTLTSRNNGASGATPLCGFPHH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
V K+ GYR+ + EQ E P + KG +VKR+I +++ GT E
Sbjct: 68 AAERYVPKMVAAGYRIAICEQVEDP------KLAKG----IVKRDIVEIISAGTAMNEEN 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+A +A+YL A + + DV T + + C S
Sbjct: 118 LNAK-EANYLCAYVPATSDDGKGGNGDVAAFAIADVTTGYLATCRS----SVQAFECEFS 172
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P EI+ P P +++ N LV +L + D VL + E
Sbjct: 173 RRMPKEIVIPEGTTIPSAIMDLIK-AENVLVTELPAILFAEDQAKDVL-----FTHFKVE 226
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+L DGL G+ + T +G AL L KKS L
Sbjct: 227 AL--------------DGL----GLDGRVFETSVTG-----ALLQYLINQKKSELSH--- 260
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F E+L YM LD L NLE+ + D S TL + L+ VTA G
Sbjct: 261 -FTTLEILNLDD--------YMTLDPSTLRNLELVRPLNADDYSSTLCSVLDFTVTAMGG 311
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASS 744
R L+ W++ PL IRER++AV L V P AL E +++L+ + DMERL+ R+ S
Sbjct: 312 RTLKDWVSHPLIAVDRIREREEAVGEL--VQNPVALDELKESLTSILDMERLMGRV-GSG 368
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHIL 801
AN R+ L G S + +LE + L L
Sbjct: 369 RANARD---------------------LAGMGRSLSQASKVADVLEGLHAPLFEGLRETL 407
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
KG +LK+F D G I P G + D+ + +KE +
Sbjct: 408 NAAKGRGE--DLLKYFNDDLPMT-VREGGMIRP--GASAELDAMNEDIKERREWIASLEG 462
Query: 862 EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGS----VPRDYELRSSKKGFFRYWTPN 914
+R+ LG I + +G + Y +E+ ++ +P +Y + + RY TP
Sbjct: 463 RERERLG---IPSLKVGYNRVFGYYIEITKAQMAKATQPIPDEYIRKQTTVNGERYITPE 519
Query: 915 IKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
+K+ +S AE + ++ ++ + E N WR + A
Sbjct: 520 MKECESVISNAEVN----IHALEYKIFCELRERVNSWRAELQGIA 560
>gi|449514801|ref|XP_002190416.2| PREDICTED: DNA mismatch repair protein Msh3 [Taeniopygia guttata]
Length = 963
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 159/649 (24%), Positives = 283/649 (43%), Gaps = 72/649 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K K+ D V+ + G Y F DA + AKEL++ ++ P ++V
Sbjct: 61 QFIEMKKKYKDAVLCVECGYKYRFFGQDAEIAAKELNIYCHLDHNFMTASIPSHRLFVHV 120
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKG-SKDKVVKREICAVVTKGTL---------- 440
+L KG++V V++Q ET K G +K + R++ A+ TK TL
Sbjct: 121 RRLVAKGHKVGVIKQMETAA-----LKAAGENKSSLFSRKLTALYTKSTLIGEDVNPLLK 175
Query: 441 ----TEGELLSANPDASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
+ E ++A+ +YL+ + E+ S + D GI + T +I D
Sbjct: 176 LDDAVDVEEVTADVPDNYLLCICENGDSLKDRKKGDIVTGIVAIQPTTGEVIFDSFRDCA 235
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
S L + L+PVEII P+ LS ++E+ I T L +D + + E E
Sbjct: 236 SRSELESRVLRLQPVEIILPSR-LSDQSEKLIHSITSMRLQDDRIRIERM---ENLNFEY 291
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + ++T + + G T P LS ++S V+ +L + YL
Sbjct: 292 SHAFQKVT---------DFYAKEVPG---TAGPQNLSVILSLDKP---VICSLAAVITYL 336
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L ++ YM L+ ++NLE+ +N + G+L
Sbjct: 337 KEFNLEKMLYNPSNFKQLS-------SEAEYMTLNGTTMKNLEILQNQTDMKTKGSLLWV 389
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + + L +LPD+ER
Sbjct: 390 LDHTKTSFGRRRLKKWVTQPLLKLSEINARLDAVSEILLSESSVFGQIQNLLCKLPDLER 449
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L +F ++ + ++ +S L +L QA + I + S
Sbjct: 450 GLCSVF---------------HKKCSTQEFFLIVSTLSRLDLEIQAF--VPVIQSHVRSP 492
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
L + L +P ++S +K + + EA +G D+ + KK +EI+
Sbjct: 493 LLKNALLE---IPELLSPVKQYLKILNE-EAAKTGDKTQLFKDLTDFPAIRKKKEEIQDV 548
Query: 856 LTK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L+K HL + RK + + S YV + +L+EV S + SVP D+ + SS + R+ +
Sbjct: 549 LSKIQLHLPDIRKQIKNPSAEYVAVSGQEFLIEVKNSHKSSVPSDWVMVSSTRAVSRFHS 608
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
P + + L + + A + + F EH++ + + A +
Sbjct: 609 PLVTENYRVLQRLREQLGLACSAEWLCFLDHFSEHYHPVSKAICHLATV 657
>gi|109077790|ref|XP_001110439.1| PREDICTED: DNA mismatch repair protein Msh3 [Macaca mulatta]
Length = 1124
Score = 143 bits (361), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 148/652 (22%), Positives = 278/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 283 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 338
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 339 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGIVFIGIVGVQPATGEVVFDSFQDSAS 398
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 399 RSELETRMSNLQPVELLLPS-ALSEQTEMLIHRATSVSVQDDRI----------RVERMD 447
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 448 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 499
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 500 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 552
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 553 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 612
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 613 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHVQSDL 655
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA-- 854
L ++ +P ++S ++H+ + A + + D+ K+ EI+
Sbjct: 656 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVS 711
Query: 855 -SLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 712 DKIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 771
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ + L+Q + + + +F EH++ + V A + I
Sbjct: 772 FVVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHYLCKAVHHLATVDCIF 823
>gi|385304493|gb|EIF48508.1| protein required for mismatch repair in mitosis and forms a complex
with msh2p to repair bo [Dekkera bruxellensis AWRI1499]
Length = 669
Score = 142 bits (359), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 152/281 (54%), Gaps = 15/281 (5%)
Query: 283 RFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHM 342
RFS +++ +L + +DA+ R D YD RTLY+P S +KQ+W K K
Sbjct: 306 RFSKENEERYQWL-VNVKDAEGRPETDPEYDSRTLYIPNSAWSKFSAFEKQYWAIKCKMW 364
Query: 343 DKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQPHCGFPERNFSMNVEKLARKGY 399
D V+FFK GKF+EL+E DA + ++ DL+ + G PE +F ++ +GY
Sbjct: 365 DTVVFFKKGKFFELYENDADIAHQKFDLKLAGTGRANMRLAGIPEMSFDYWAKRFVDEGY 424
Query: 400 RVLVVEQTETPEQLELRRKE---KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLM 456
+V V Q ET ++R + K KV+KRE+ V+T GTLT+ +L+ + + Y +
Sbjct: 425 KVAKVIQKETSLGKQMRERNSRGKSKASKVIKRELDCVLTCGTLTDQNMLTDDM-SKYCL 483
Query: 457 ALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
++ E AS++ FG+C VD +T ++ + Q DD +C L LL++++P+E++
Sbjct: 484 SIKERVNEDASKT----FGVCFVDTSTGKLEVTQFDDDPECGRLETLLAQVQPMEVLVEX 539
Query: 517 NMLSPETERAILRHTRN--PLVNDLVPLSEFWDAETTVLEI 555
+ +SP + ILR + N L P +EF ++T ++
Sbjct: 540 SKISPLAMK-ILRFNSHAGAFFNFLKPETEFLGFDSTFEQL 579
>gi|197097574|ref|NP_001125043.1| DNA mismatch repair protein Msh3 [Pongo abelii]
gi|55726784|emb|CAH90153.1| hypothetical protein [Pongo abelii]
Length = 1023
Score = 142 bits (359), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 279/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 121 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 180
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 181 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 236
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 237 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 296
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 297 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRTTSVSVQDDRI----------RVERMD 345
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 346 NIYFEY-SHAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 397
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 398 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 450
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 451 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 510
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 511 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 553
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 554 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 609
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 610 DEIQMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 669
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 670 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 721
>gi|156121255|ref|NP_001095775.1| DNA mismatch repair protein Msh3 [Bos taurus]
gi|151555688|gb|AAI49015.1| MSH3 protein [Bos taurus]
Length = 929
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 159/722 (22%), Positives = 309/722 (42%), Gaps = 97/722 (13%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKR------RRPGDVYYDPRTLYLPPDFLRNL 327
N V + S+ ++++ F LGP ++ + +P + +++Y P +
Sbjct: 167 NAVSSEDSKSQTSQKDKTFSHLGPSQKSYENLQKTSDSKPSN--KRTKSIYTPLEL---- 220
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERN 386
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P
Sbjct: 221 -----QYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHR 275
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL- 445
++V +L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 276 LFVHVRRLVAKGYKVGVVKQTETAALKAI----GDNKSSLFSRKLTALYTKSTLIGEDVN 331
Query: 446 -------------LSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQV 491
+ + SYL+ + E+ ++ + GI V AT ++
Sbjct: 332 PLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKRGSVSIGIVGVQPATGEVVFDSF 391
Query: 492 MD-----DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
D +L+ +LC L+PVE++ P++ LS +TE I R T + +D + +
Sbjct: 392 QDSASRSELETRILC-----LQPVELLLPSD-LSEQTETLIHRVTAMSVRDDRIRVERM- 444
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+ E + + +T E K ++ SQ+ S++I+ V+
Sbjct: 445 --KNVYFEYSHAFQEVT-EFYAKDVVDIKGSQS-----------FSDIINLEKP---VIC 487
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
+L + YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N
Sbjct: 488 SLAAIIRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDM 540
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
+ G+L+ L+H T+FG+R L+ W+ +PL I R DAV+ + +
Sbjct: 541 KTKGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENH 600
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L +LPD+ER L ++ ++ + ++ + L+ + QA +
Sbjct: 601 LRKLPDIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IP 643
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
A+ + ES L + +P ++S ++H+ + A + + D+
Sbjct: 644 AVNSHVESELLQTFILE---IPGLLSPVEHYLKILNEQAAKIGDKTELFKDLS-DFPLIK 699
Query: 847 KK---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
K+ ++++ + HL+E RK+L + S YVT+ +++EV S +P D+ S
Sbjct: 700 KRKDEIQDVTKKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPTDWVKIGS 759
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
K R+ +P I + L+Q + + + F EH++ + V A +
Sbjct: 760 TKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFNEHYHTLCKAVHHLATIDC 819
Query: 964 IL 965
IL
Sbjct: 820 IL 821
>gi|364506056|pdb|3THW|B Chain B, Human Mutsbeta Complexed With An Idl Of 4 Bases (Loop4)
And Adp
gi|364506059|pdb|3THX|B Chain B, Human Mutsbeta Complexed With An Idl Of 3 Bases (Loop3)
And Adp
gi|364506063|pdb|3THY|B Chain B, Human Mutsbeta Complexed With An Idl Of 2 Bases (Loop2)
And Adp
gi|364506067|pdb|3THZ|B Chain B, Human Mutsbeta Complexed With An Idl Of 6 Bases (Loop6)
And Adp
Length = 918
Score = 142 bits (358), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 279/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 19 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 78
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 79 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 134
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 135 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 194
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + V +
Sbjct: 195 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRI----------RVERMD 243
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
NIY + + A + G + GI+ + V+ +L + YLK
Sbjct: 244 NIYFEYS-HAFQAVTEFYAKDTVDIKGSQIISGIV-------NLEKPVICSLAAIIKYLK 295
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 296 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 348
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 349 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 408
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 409 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 451
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 452 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 507
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 508 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 567
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 568 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 619
>gi|296485077|tpg|DAA27192.1| TPA: mutS homolog 3 [Bos taurus]
Length = 925
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 158/722 (21%), Positives = 307/722 (42%), Gaps = 97/722 (13%)
Query: 274 NPVMGDVSERFSAREADKFHFLGPDRRDAKR------RRPGDVYYDPRTLYLPPDFLRNL 327
N V + S+ ++++ F LGP ++ + +P + +++Y P +
Sbjct: 167 NAVSSEDSKSQTSQKDKTFSHLGPSQKSYENLQKTSDSKPSN--KRTKSIYTPLEL---- 220
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERN 386
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P
Sbjct: 221 -----QYLEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHR 275
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL- 445
++V +L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 276 LFVHVRRLVAKGYKVGVVKQTETAALKAI----GDNKSSLFSRKLTALYTKSTLIGEDVN 331
Query: 446 -------------LSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQV 491
+ + SYL+ + E+ ++ + GI V AT ++
Sbjct: 332 PLVKLDDAVNVDEVMTDTSTSYLLCICENKENVKDKKRGSVSIGIVGVQPATGEVVFDSF 391
Query: 492 MD-----DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
D +L+ +LC L+PVE++ P++ LS +TE I R T + +D + +
Sbjct: 392 QDSASRSELETRILC-----LQPVELLLPSD-LSEQTETLIHRVTAMSVRDDRIRVERM- 444
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+ E + + +T E K ++ SQ+ D + + V+
Sbjct: 445 --KNVYFEYSHAFQEVT-EFYAKDVVDIKGSQSFSDII--------------NLEKPVIC 487
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
+L + YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N
Sbjct: 488 SLAAIIRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDM 540
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
+ G+L+ L+H T+FG+R L+ W+ +PL I R DAV+ + +
Sbjct: 541 KTKGSLFWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENH 600
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L +LPD+ER L ++ ++ + ++ + L+ + QA +
Sbjct: 601 LRKLPDIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IP 643
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
A+ + ES L + +P ++S ++H+ + A + + D+
Sbjct: 644 AVNSHVESELLQTFILE---IPGLLSPVEHYLKILNEQAAKIGDKTELFKDLS-DFPLIK 699
Query: 847 KK---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
K+ ++++ + HL+E RK+L + S YVT+ +++EV S +P D+ S
Sbjct: 700 KRKDEIQDVTKKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPTDWVKIGS 759
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
K R+ +P I + L+Q + + + F EH++ + V A +
Sbjct: 760 TKAVSRFHSPFIVENYRHLNQLREQLVLDCSAEWLAFLENFNEHYHTLCKAVHHLATIDC 819
Query: 964 IL 965
IL
Sbjct: 820 IL 821
>gi|451998559|gb|EMD91023.1| hypothetical protein COCHEDRAFT_1176734 [Cochliobolus
heterostrophus C5]
Length = 1096
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 161/668 (24%), Positives = 276/668 (41%), Gaps = 84/668 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KH+D +I ++G Y+ F DA + +KEL + + G E P
Sbjct: 195 QYLDIKRKHLDTIIVMEVGYKYKFFGEDARIASKELGIVCIPGKFRYDEHPSEAHLDKFA 254
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
FP ++V++L + ++V VV Q ET + +++ R++ + TKG
Sbjct: 255 SASFPTHRLQVHVKRLVQANHKVGVVRQVETAA----LKAAGNNRNAPFVRKLTNLYTKG 310
Query: 439 TL----------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
T TEG S YL+ +TES+ G+ V AT II
Sbjct: 311 TYVDDVEGLETPTEGSGTSTQ-STGYLLCITESHAKGWGTDEKVQVGLVAVQPATGDIIY 369
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
D S + LL + P E + + LS T + ++ H N S
Sbjct: 370 DDFEDGFMRSEIETLLLHIAPAEFLVVGD-LSKATNK-LIEHLSASKTNVFGDRSRVERV 427
Query: 549 ETTVLEIKNIYNRITAESLNKADSNV-ANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
E Y+ I+ K S+ A+S+ +G +L ++ + + LSA
Sbjct: 428 EKPKTMAAQAYSHISNFYAGKMKSSTDADSEKQG-------AVLDKVHQLSEHVTMCLSA 480
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + YL + L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 481 M---ITYLSEYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDFT 529
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKA 726
S G+L+ +N T FG+RLLR W+ RPL + + ER AV L+ ++ +
Sbjct: 530 SKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKAKLEERIAAVEELKEGEHTIPVDKLKFV 589
Query: 727 LSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
L ++ D+E++L R++ Y+ + +L + AL E+ Q S+
Sbjct: 590 LGKIKTDLEKVLIRIY---------------YKKCTRPELLSALQALQ--EISSQYLSAQ 632
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRII----PHGGVDMD 841
S L ++ +P I L F D + A + + H D+
Sbjct: 633 TPEQSGFSSTLLSEAVS---NVPKIYEDLNGFLDKINASAAKDDDKYSFFREEHEAEDI- 688
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLRGSVPRD 897
+ + +E L H KE LG + + YVT+ YL+EV PE + VP
Sbjct: 689 -NDLKLSIASVEDDLNTHRKEAAAKLGKSKVDYVTVAGIEYLIEVKRKSPEEKK--VPAS 745
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
++ S+ K R+ TP +K++L E Q + +A RL+ + + + R +A+
Sbjct: 746 WQQISATKAVLRFHTPEVKRMLQERDQYKESLAAACDRAYMRLLEEISSKYQQLRDCIAS 805
Query: 958 TAGLTLIL 965
A L +L
Sbjct: 806 LATLDALL 813
>gi|291394958|ref|XP_002713953.1| PREDICTED: mutS homolog 3 [Oryctolagus cuniculus]
Length = 1057
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 276/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 161 QFLEVKRQHQDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFLTASIPTHRLFVHV 220
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT---------- 441
+L KGY+V VV+QTET + +K + R++ A+ TK TL
Sbjct: 221 RRLVAKGYKVGVVKQTETAA----LKAVGDNKSSLFSRKLTALYTKSTLIGEDVNPLIKL 276
Query: 442 EGEL----LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+G + + + ++YL+ + E+ + + F G+ V AT ++ D
Sbjct: 277 DGAMNVDEIMTDASSNYLLCICENKEKAKDKKKGSIFIGVVGVQPATGEVVYDSFQDSAS 336
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P++ LS +TER I R T + +D + + D E
Sbjct: 337 RSELETRISALQPVELLLPSH-LSEQTERLIHRATAVSVRDDRMRVERMEDVH---FEYS 392
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T A + +G L GIL + V+ +L + YLK
Sbjct: 393 HAFQMVT--------EFYAKDETQGKCSQSLSGIL-------NLEKPVVCSLAAVIRYLK 437
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L ++ +M ++ L NLE+ +N + G+L+ L
Sbjct: 438 EFNLEKMLSKPENFKQLS-------SEVEFMTINGTTLRNLEILQNQTDMKTKGSLFWVL 490
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L++LPD+ER
Sbjct: 491 DHTKTSFGRRKLKKWVTQPLLKLRDINARLDAVSEVLHSESSVFGQIENHLNKLPDIERG 550
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG---CELMDQACSSLGAILENTE 793
L ++ + + + +V K + Q + A++ +L+ + +L E
Sbjct: 551 LCSIY-HKKCSTQEFFLIVKTLCHLKSEFQALVPAVNSQVHSDLLRTCALDIPELLRPAE 609
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
R L + + + K D F ++ + +++E+
Sbjct: 610 -RYLQVLNEQAAKIGDKTELFKDLSD-FPLIKKRKN------------------EIQEVT 649
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 650 EKIQVHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSSLSCIPADWIKVGSTKAVSRFHSP 709
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + F HH+ + V A + I
Sbjct: 710 FIVENYRRLNQLREQLALDCGAEWLGFLETFSGHHDSLCKAVHHLATVDCIF 761
>gi|181842|gb|AAB47281.1| MSH3 [Homo sapiens]
gi|49615092|dbj|BAD27111.1| hMSH3 protein [Homo sapiens]
Length = 1137
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 148/652 (22%), Positives = 282/652 (43%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRIRVERM---DNIYFEYS 466
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K ++ SQ I+S +++ V+ +L + YLK
Sbjct: 467 HAFQAVT-EFYAKDTVDIKGSQ-----------IISGIVNLEKP---VICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ R
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIGRG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 835
>gi|401420108|ref|XP_003874543.1| putative mismatch repair protein MSH8 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490779|emb|CBZ26043.1| putative mismatch repair protein MSH8 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1014
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 188/752 (25%), Positives = 307/752 (40%), Gaps = 147/752 (19%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P T+ +P +L ++ ++Q+W+ KSKH + V+FFK GKFYEL++ DA + +E L+ +
Sbjct: 29 PSTISIPHKYLDAMANMERQYWDIKSKHYNVVVFFKKGKFYELYDYDAVIANREFGLKMV 88
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE++++ +GY+V VEQ + E K K ++V+
Sbjct: 89 LDTSNRGKMRLAGVPEQSYNEWARLFVFRGYKVGRVEQMKESESEVQTAKMKVVPRELVE 148
Query: 429 ----------------REICAVVTKGTLTEGELL--SANPDASYLMALTESNQSPASQST 470
RE+ + +GEL+ + D S +A S ++
Sbjct: 149 VLTPGTLKDPSMLSDHREVFVLSLAPVFRDGELVIDAFAVDLSRRVAYRCPCGSRKREAK 208
Query: 471 DRCFGICV-VDVATSRIILGQVMDDLDCSVLCCLLSELRPVE-IIKPANMLSPETER-AI 527
C I + + + G + + L LL +L P E II ++ +S + ER
Sbjct: 209 TGCDTISSSLSIKRENGVYGSLKNS-TLRALSALLQQLSPKEVIISSSDWVSNDAERRQT 267
Query: 528 LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR----------ITAESLNKA------- 570
+HT + + W E+ +++I +R +TAE + +
Sbjct: 268 FKHTCDEITK--------W-TESEGFSVEHISSRALPSLSMTTMVTAEQVMTSYFTFLCL 318
Query: 571 DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKF 630
S++A + T L G++ T S + + A G K S +D RF K
Sbjct: 319 ASDIAIFSTATEYTTHLSGVIGTDSETAASDATLDGAASG-----KSSIMDYEH-RFDK- 371
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
+VLDA + NLEV N G +L LN C T G+RL R+
Sbjct: 372 ---------------GLVLDATTVSNLEVLTNLHDGSEKHSLNECLNRCSTNGGRRLFRS 416
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG-- 748
WL RP +S +I RQDAV L N L L DME SE G
Sbjct: 417 WLLRPSASSRVIAARQDAVQFLTRYN---------LLHSLTDME--------VSEQVGEK 459
Query: 749 --RNSNKVVLYEDAAKKQLQEFISALHG-----------CELMDQACSSLGAILENTESR 795
R+S + L+ + F+S L + M Q +LG IL + R
Sbjct: 460 RSRSSEGLSLFSSVVSVDFERFLSRLSDIRQNDSQKIAYVDPMVQYKKNLGIILSSV--R 517
Query: 796 QLHHILTPGK---------------GLPAIVSIL-----------KHFKDAFDWVEANNS 829
L ++ GK G+PA++ L K + FD A S
Sbjct: 518 ALSAMVGWGKQFFARCREVACEQGTGIPALLGELLEEVTAAEASNKRIEGLFDRQAAEES 577
Query: 830 GRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVP- 887
G +IP G +D+A K++ +E+ L ++ Q+ + + +GKDL+L+EV
Sbjct: 578 GLLIPSPGTSSVFDAATTKLRHVESKLHDVRRQLQQDVFRGAQAHFTDLGKDLFLIEVAV 637
Query: 888 -----ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+ G V R RS+K +Y +I+ L+ +A + K AL ++L +
Sbjct: 638 ADAPKMTPAGMVERA---RSAKS--VKYVVSSIEALVESHKEATAMKAGALLTVLCSVSS 692
Query: 943 QFCEHHNKWRQMVAATAGLTLILLDGSLLHAF 974
+ C+ + A + + +L L HAF
Sbjct: 693 RICDEFPRLFSASRALSYIDCLLSLAQLHHAF 724
>gi|296034483|gb|ADG85113.1| mismatch repair protein [Solanum lycopersicum]
Length = 782
Score = 141 bits (356), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 187/384 (48%), Gaps = 61/384 (15%)
Query: 374 KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
+G+ G E V+KL +GY+V +EQ ET EQ K +GS V++R++
Sbjct: 4 RGKCRQVGISESGIDEAVQKLLARGYKVGRMEQLETSEQ----AKSRGSTS-VIRRKLVH 58
Query: 434 VVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
V+T T +EG + PDA +L+A+ E+ + + ST G VD A ++ +G V D
Sbjct: 59 VLTPSTTSEGNI---GPDAVHLLAVKETCKELGNGSTT--IGFAFVDCAALKVWVGSVED 113
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRN----PLVNDLVPLSEFWD-A 548
D C+ L LL ++ P E+I A LS + ++A+ +++ PL++ + P ++F D A
Sbjct: 114 DASCAALEALLMQVSPKEVIFNARGLSKDAQKALKKYSSTGPAAPLLSPVQPGADFVDPA 173
Query: 549 ET-TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
E L++K + R S NK D G+ L A
Sbjct: 174 EVKNFLDLKGYFKR----SCNKWDHAF----------------------DGEDHDVALCA 207
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDM----AKKPYMVLDAPALENLEVFENS 663
LG + +L++ L+E L GD+ K + +D L NLE+F N+
Sbjct: 208 LGSLVNHLERLMLNEVLHN------------GDILSYEVYKGCLKMDGQTLVNLEIFNNN 255
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
G SGTLY L++CVT GKRLLR W+ PL + I R D V L V+ L
Sbjct: 256 VDGSPSGTLYRYLDNCVTLPGKRLLRKWICHPLKDVEKINHRLDVVDKL--VDNA-TLST 312
Query: 724 RKALSRLPDMERLLARLFASSEAN 747
+ L +LPD++RLL R+ AS +++
Sbjct: 313 AQYLRKLPDLDRLLGRVKASIQSS 336
>gi|156377857|ref|XP_001630862.1| predicted protein [Nematostella vectensis]
gi|156217891|gb|EDO38799.1| predicted protein [Nematostella vectensis]
Length = 886
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 165/664 (24%), Positives = 278/664 (41%), Gaps = 85/664 (12%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
++Q+ E K+++ D V+F + G ++ F DA + AKEL++ +M P +
Sbjct: 12 EQQFMEIKARNSDAVLFIECGYKFKFFGDDAEIAAKELNIMCFMDHNFMVASIPTHRLHI 71
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT--EGELLS 447
+V++L KGY+V VV+Q ET + +K V RE+ A+ TK TL + E+L
Sbjct: 72 HVKRLVNKGYKVGVVKQMETAA----LKAASDNKSNVFTRELHALYTKSTLVGEDMEVLR 127
Query: 448 ANPDAS------------YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
DA+ YLM + E + + T +GI V +T II D
Sbjct: 128 GKEDAAGGDEVSLEAHGGYLMCVHEEDSGAKTGIT---YGIVAVQPSTGEIIYDYFPDSP 184
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAIL------RHTRNPLVNDLVP---LSEFW 546
CS L L L P E++ + E R+ L + +P+ + +P S
Sbjct: 185 SCSELETRLEHLSPSELLIHDTL--SERTRSFLDVFSSYYKSADPIRTERIPDPLPSSQS 242
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
DA N+I E N D +S + L + V
Sbjct: 243 DA-----------NQILQEFCNSTDETFGSSSPNSQE--------TLLQTLLTLPLPVQK 283
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
YLK LD+ L FE F +AK +M L+ AL+NLE+ + S+ G
Sbjct: 284 CFISLQKYLKDFKLDKVLKLAGNFE-----KFSTIAK--FMKLNGCALQNLEILK-SQCG 335
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV--NQPFALEFR 724
G+L L+H T FGKRLL+ W+ +PL I ER AV+ L + +QP
Sbjct: 336 SRKGSLLGILDHTSTPFGKRLLKRWITQPLLEKREIEERLKAVSCLSALSSDQPLLKSIH 395
Query: 725 KALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
+ LS +PD+E+ L ++ Y+ + + AL +L D+ S+
Sbjct: 396 RLLSHIPDLEKGLCAIY---------------YKKCSTVEFLSIAKAL--SKLHDELKST 438
Query: 785 -LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFD--WVEANNSGRIIPHGGVDMD 841
L + E S L T +P ++S ++ F + D + + ++
Sbjct: 439 ELNSAKELAGSSILSRTFTE---VPDLLSGVEDFLNQIDEKAAKCGDKTKLFTDPSKFPP 495
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
+ +++ + A L +H E R+ + S+ Y T+ + +L+EV + SVP D+
Sbjct: 496 VLTCIQEIDGLTAELKEHRSEIRRTIQHPSVDYCTVSGNEFLIEVRNAKLPSVPADWIKI 555
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
S+ K R+ TP +++ + Q + A + + F + ++ + V A L
Sbjct: 556 SATKQICRFRTPFVEEKFKSICQWREKLAQACQEAWLEFLDIFSTSYTRFHRAVKLVANL 615
Query: 962 TLIL 965
I+
Sbjct: 616 DCIM 619
>gi|392567582|gb|EIW60757.1| hypothetical protein TRAVEDRAFT_57899 [Trametes versicolor
FP-101664 SS1]
Length = 1084
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 148/611 (24%), Positives = 256/611 (41%), Gaps = 72/611 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF----- 387
Q E K+K+ V+ + G F+ DA + +KEL + FP+RNF
Sbjct: 217 QVRELKAKYPGTVLMIQSGYKMLFFDEDAKIASKELGM---------VCFPKRNFLTAMI 267
Query: 388 -----SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
++++KL GY+V +VEQTET +K +++++ RE+ + T T +
Sbjct: 268 PLHRRDVHMKKLLSHGYKVGIVEQTETAAL----KKAGETRNELFGREVTHMYTAATFVD 323
Query: 443 --GELLSANPD-ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ +P+ A LM E + + + +T ++ + D+ +
Sbjct: 324 DLNSVDELDPNSAPPLMCFLEEPKGGMGTDERVTIAMIAISPSTGDVVWDEFEDNHMRTE 383
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L + +P E++ P+ LSP TE+ I T + + + F + + + +
Sbjct: 384 LETRMVHTKPYELLLPSKKLSPATEKMIKHFTEHSHTEHRMRIERF----SKQMAYTDAF 439
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++ +K +N + GD L ++E V+ L +L YL +F
Sbjct: 440 AILSKFYTDKTHANASEGFNNGD----LMAAITEF------SKIVVITLAQSLNYLA-TF 488
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LR +F F ++ +M+L+A L NLE++ N + G+L L+
Sbjct: 489 NVADALRETRF-------FSKFTERTHMLLNANTLTNLEIYVNDTDYTTKGSLMWILDRT 541
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
T FG RLLR+W+ +PL ++ +RER DAV + P + R+ L RLPD+ R L R
Sbjct: 542 STKFGARLLRSWVGKPLVDAAALRERTDAVEEILSNRSPRLTQLRELLRRLPDLARGLCR 601
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ Y ++L + A + + LH
Sbjct: 602 ---------------IQYGKCTPQELAVLLKAFRRVS-TTFTPPHPAQSQQAAPAAGLHA 645
Query: 800 ILTPG--KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD----MDYDSACKKVKEIE 853
L G + LP + +K DA D+ A +D +D +AC +V E E
Sbjct: 646 GLLVGIVESLPRLRDPVKEICDAVDFAAAEQGKEEAMWTDIDRFPELDSLTACIQVAESE 705
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L LK RK+L ++ Y + Y++E+ + R +P ++ L SS K RY TP
Sbjct: 706 --LMDELKTIRKVLKKPALKYTEWNGEEYVVEIRKDERRDIPVNWTLLSSTKFARRYHTP 763
Query: 914 NIKKLLGELSQ 924
++ L E +Q
Sbjct: 764 EVRAKLQERAQ 774
>gi|323703567|ref|ZP_08115212.1| DNA mismatch repair protein MutS [Desulfotomaculum nigrificans DSM
574]
gi|323531470|gb|EGB21364.1| DNA mismatch repair protein MutS [Desulfotomaculum nigrificans DSM
574]
Length = 873
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/431 (29%), Positives = 191/431 (44%), Gaps = 70/431 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGE---QPHC 380
L+ +Q+ E K ++ D ++FF++G FYE+F DA + ++EL++ GE P C
Sbjct: 3 LTPMMRQYLEIKEQYPDAILFFRLGDFYEMFFEDAKLASRELEITLTGRDAGEPERVPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY++ + EQ E P+ S +VKRE+ V+T GT+
Sbjct: 63 GVPFHAADNYIAKLIDKGYKIAICEQVEDPK----------SAKGLVKREVIRVITPGTV 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+G +LS + D +YL+A+ QS +D G+ V T + L Q++D+
Sbjct: 113 IDGNMLS-DKDNNYLVAVCRIGQSYGLAVSDLSTGLFQVTQMTGQWALNQLLDE------ 165
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L L P E++ P ++ E + F + E T I ++ +
Sbjct: 166 ---LIRLAPREVVLPHSLWQDEGVK-----------------KSFQELEGTT--ITSLAD 203
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+I + + QA+ L C V A GG L Y
Sbjct: 204 QIFTQEQAQQAITEHFGQAKTTALDCW------------QSPAVCGAAGGLLHY------ 245
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
LL K +L + + YM+LD A NLE+ ++ R G G+L + L+
Sbjct: 246 ---LLETQKRKLQHITEITSYFTQSYMILDGIARRNLEICKSLRDGGKKGSLLSVLDLTR 302
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
+A G RLL+ WL +PL + I ER DAV L V+ E AL + DMERL AR
Sbjct: 303 SAMGGRLLKAWLEQPLIDIKAINERLDAVQEL--VDSVLLRDELATALKNVYDMERLTAR 360
Query: 740 LFASSEANGRN 750
A AN R+
Sbjct: 361 A-AYGSANARD 370
>gi|281350300|gb|EFB25884.1| hypothetical protein PANDA_004330 [Ailuropoda melanoleuca]
Length = 1074
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 149/655 (22%), Positives = 283/655 (43%), Gaps = 78/655 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 211 QYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 270
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++L D
Sbjct: 271 RRLVAKGYKVGVVKQTETAA----LKAVGDNRSSLFSRKLTALYTKSTLIGEDILFKVDD 326
Query: 452 A------------SYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD----- 493
A S+L+ + E+ ++ + F GI V AT ++ D
Sbjct: 327 AVNVDEIITDSSTSFLLCICENKENIKDKKKGNIFIGIVGVQPATGEVVFDSFQDSASRS 386
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
+L+ +LC L+PVE++ P++ LS +TE I R T + +D + + +
Sbjct: 387 ELETRILC-----LQPVELLLPSH-LSEQTEALIHRATAASVRDDRIRVERM---DNMYF 437
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
+ + + +T E K ++ SQ+ GI+ + V+ +L +
Sbjct: 438 DYSHAFQAVT-EFYAKDAVDIQASQS-------FSGII-------NLEKPVICSLAAIIR 482
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N + G+L
Sbjct: 483 YLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDMKTKGSLL 535
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+
Sbjct: 536 WVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDI 595
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER L ++ ++ + ++ + L+ + QA + A+ +
Sbjct: 596 ERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IPAVNSHVR 638
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VK 850
S L + +P ++S ++H+ + A + + D+ K+ ++
Sbjct: 639 SDLLQTFILE---IPELLSPVEHYLRILNEQAAKTGDKTELFKDL-TDFPLIKKRKDEIQ 694
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E+ + HL+E RK+L + SI YVT+ +++E+ S +P D+ S K R+
Sbjct: 695 EVTDKIQIHLQEIRKILKNPSIRYVTVSGQEFMIEMKNSAVSCIPTDWVKVGSTKAVSRF 754
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+P I + L+Q + + + F EH++ + V A + I
Sbjct: 755 HSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSEHYHSLCKAVHHLATIDCIF 809
>gi|351706766|gb|EHB09685.1| DNA mismatch repair protein Msh3, partial [Heterocephalus glaber]
Length = 1071
Score = 140 bits (354), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 160/668 (23%), Positives = 267/668 (39%), Gaps = 96/668 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 166 QYLEVKQQHPDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHSFMTASIPTHRLFVHV 225
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS---- 447
+L KGY+V VV+QTET + S+ R++ A+ TK TL ++LS
Sbjct: 226 RRLVAKGYKVGVVKQTETAAL----KAVGDSRSSPFARKLTALYTKSTLIGEDILSEWNF 281
Query: 448 ----------------ANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQ 490
+ A YL+ + E S + F G+ V AT ++L
Sbjct: 282 SLIKLDDGAVGVDEVTTDASAGYLLCICEDKDSAKGKRKGSVFIGVVAVQPATGELLLDA 341
Query: 491 VMDD---LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D L+ C L + A +L PE L +P V+ V L D
Sbjct: 342 FQDTALRLELETRLCSL---------QLAELLLPER----LSEWSHPTVSHPV-LCHLRD 387
Query: 548 AETTVLEIKNIYN------RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
V + N+Y ++ E K +V SQ+ GI+ +
Sbjct: 388 DRIRVERMDNVYFEYSHAFQVVTEFYTKDPVDVRGSQS-------FSGII-------NLE 433
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
V+ L + YLK+ L++ L + F+ L ++ M ++ L NLE+ +
Sbjct: 434 KPVICCLAAIIRYLKEFNLEKILSKPENFKQLS-------SEMELMTMNGTTLRNLEILQ 486
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
N G S G+L L+H TAFG+RLLR W+ PL I R AV+ + G
Sbjct: 487 NQTDGKSKGSLLWVLDHTHTAFGRRLLRKWVTHPLLRLSEINARLCAVSEVLGSESSVFA 546
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQ 780
+ L +LPDMER L ++ K QEF + C L +
Sbjct: 547 QIESLLQKLPDMERGLGSIYHR------------------KCSTQEFFLIVRTLCHLKSE 588
Query: 781 ACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM 840
+ + + +S L I+ +P ++S ++H+ A + +
Sbjct: 589 LQVLMPVVNSHVQSDLLRMIVLE---IPELLSPVEHYLKILSEQAAKIGDKTELFKDLS- 644
Query: 841 DYDSACKK---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
D+ K+ ++++ A + HL+E RK+L + S YVT+ +++EV S +P D
Sbjct: 645 DFPLIKKRKDEIQDVTAKIQTHLQEIRKILKNPSAQYVTVSGQEFMIEVKNSAVSCIPPD 704
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
+ S K R+ +P + + L Q + + R + F EH++ + V
Sbjct: 705 WVKVGSTKAVSRFHSPLVVESYRLLQQLREQLVLDCNAEWLRFLESFGEHYHSLCKAVRH 764
Query: 958 TAGLTLIL 965
A + I
Sbjct: 765 LATIDCIF 772
>gi|385799933|ref|YP_005836337.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM
2228]
gi|309389297|gb|ADO77177.1| DNA mismatch repair protein MutS [Halanaerobium praevalens DSM
2228]
Length = 868
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 165/682 (24%), Positives = 284/682 (41%), Gaps = 124/682 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ- 377
+ L+ KQ+ + K+K+ D ++FF++G FYE+F DA AK LD+ GE+
Sbjct: 1 MAKLTPMMKQYHDLKNKYQDSILFFRLGDFYEMFGQDAKKAAKILDIALTARNKGGGEKI 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + + +EKL + G +V + EQ E P + +VKR++ VVT
Sbjct: 61 PMAGVPYHSAASYIEKLIKNGIKVAICEQLEDP----------SASSGIVKRDVIRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ E E+L+ N E+N A+ +G D++T L +
Sbjct: 111 GTVIENEILAEN----------ENNYLAAAFKYGNYYGFSYTDISTGEFYLTEF------ 154
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
P +E L+ N + + L + + E++N
Sbjct: 155 -----------------------PASETDKLKDEINRISPREILLDQKIAQTKLIKELQN 191
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGI-LSELISTGDSGSQVLSALGGTLFYLK 616
IYN NK + + L L G E+ + + QVL+ LG T K
Sbjct: 192 IYNFTLNILENKKYDRLYQGILDHFQLKSLEGFGCEEMKAAVYAAGQVLAYLGDT---QK 248
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
++ TLL+ E YMVLD+ + NLE+ R SG+L + +
Sbjct: 249 RTINQITLLKAYHLE-------------DYMVLDSASRRNLELTATIRDNQRSGSLLSII 295
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ VT+ G R ++ W+ +PL I +R A+ + N + R L+ + D+ER+
Sbjct: 296 DQTVTSMGGREIKKWINQPLIQKKAIEQRHTALEEIID-NYQVLDKLRAELNEIYDLERI 354
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
++++ S AN R+ V L AK ++ +++N +S
Sbjct: 355 MSKITYQS-ANARDL--VALKNSLAK-------------------LPAVENLMQNLKSDL 392
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM-DYDSACKKVKEIEAS 855
+ + T +L+ D + + I GG+ DY+S+ +++++ +S
Sbjct: 393 IIEMQTK-------FDLLEDMHDLIEKAIKSEPPTTITEGGIIASDYNSSLDQLRDLVSS 445
Query: 856 ----LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
+TK KE+R+ T I + +G + Y LEV S VP YE + +
Sbjct: 446 GKDWITKLQKEERE---KTGINTLKVGFNKVFGYYLEVTNSHTDKVPERYERKQTLSNSE 502
Query: 909 RYWTPNIKKLLGELSQAE---SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
RY P +K+ E+ AE ++ E L ++ I Q E N+ ++A
Sbjct: 503 RYIIPKLKEKEAEVLGAEEKINDLEHKLFIEIREKIAQEVERINQTAAVIAQ-------- 554
Query: 966 LDGSLLHAFLILQSNSCSSEMN 987
LD L ++L +++N E+N
Sbjct: 555 LDVLLAFSYLAIENNYTKPEVN 576
>gi|410923475|ref|XP_003975207.1| PREDICTED: DNA mismatch repair protein Msh3-like [Takifugu
rubripes]
Length = 1084
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 161/664 (24%), Positives = 280/664 (42%), Gaps = 93/664 (14%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q + K +H D ++ + G Y F DA + AK L++ ++ C P +
Sbjct: 194 EQQVVQLKEQHKDALLAVECGYKYRFFGEDAEIAAKVLNIFCHLDHNFMTCSIPTHRLFV 253
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT-------- 441
+V +L G++V V++QTET + S++ + R++ + TK TL
Sbjct: 254 HVRRLVSHGHKVGVIKQTETTAI----KASGTSRNTLFTRQLSGLYTKSTLVGEDVNPVC 309
Query: 442 ------EGELLSA--NPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
EG A +P S+L+ ++E+ Q T G+ V+ +T ++ D
Sbjct: 310 KLADVEEGSSGDAALDPPESFLLCVSETWDKLRKQLT---VGLVVIQPSTGDVLFDCFPD 366
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
S L + ++ PVEI+ P++ SPET R LV + S D V
Sbjct: 367 GPSRSELESRVVKINPVEILVPSDA-SPETHR---------LVQSIANASTQADDRVRV- 415
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
E ++ A ++N +S+ +G L S S V+ LG +
Sbjct: 416 EKRDCGQFEFASAMNTVTEFYCHSEEKG---------CRSLSSVASLESPVICCLGPLIQ 466
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL++ L+ L + F+ L + G M L+A L NLE+ N G + G+L
Sbjct: 467 YLREFNLERVLRSESSFQRLSRASEG-------MRLNAATLRNLEILNNQTDGGAKGSLL 519
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+H T FG+RLLR W+ +PL +S + +R DAV + N R LS LPD+
Sbjct: 520 WVLDHTRTHFGRRLLRRWVGQPLTDSESVSQRLDAVQEILESNSVTLNPVRSLLSHLPDL 579
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
+R + ++ K QEF C + + L A+L +
Sbjct: 580 DRGIGSIYHR------------------KSSTQEFYII---CSSLARLSLELEALLPAIQ 618
Query: 794 SRQLHHILTPGKGL----PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC--- 846
S+ +LT GL P +++ ++F + A + + ++ D A
Sbjct: 619 SQVRSSLLT---GLLLDTPNLLAPAQNFLKMLNEKAAKSGNK------TELFSDLAAFPV 669
Query: 847 -----KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELR 901
++++++ + H +E R L + Y T+ +L+EV SL SVP ++
Sbjct: 670 LKERKEQIQDVIDEIHNHRQEIRLTLKVPTFDYTTVSGQEFLIEVKNSLSSSVPPEWVKV 729
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
SS K RY TP + + +L Q + +S + QF EH++ ++ ++ A L
Sbjct: 730 SSTKAVSRYHTPFLVERYRKLLQLREQLLLDCQSEWIHFLDQFGEHYHLMKRAISHLATL 789
Query: 962 TLIL 965
+
Sbjct: 790 DCLF 793
>gi|333923601|ref|YP_004497181.1| DNA mismatch repair protein mutS [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749162|gb|AEF94269.1| DNA mismatch repair protein mutS [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 873
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 191/431 (44%), Gaps = 70/431 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGE---QPHC 380
L+ +Q+ E K ++ D ++FF++G FYE+F DA + ++EL++ GE P C
Sbjct: 3 LTPMMRQYLEIKEQYPDAILFFRLGDFYEMFFEDAKLASRELEITLTGRDAGEPERVPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY++ + EQ E P+ S +VKRE+ V+T GT+
Sbjct: 63 GVPFHAADNYIAKLIDKGYKIAICEQVEDPK----------SAKGLVKREVIRVITPGTV 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+G +LS + D +YL+A+ QS +D G+ V T + L Q++D+
Sbjct: 113 IDGNMLS-DKDNNYLVAVCRIGQSYGLAVSDLSTGLFQVTQMTGQWALNQLLDE------ 165
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L L P E++ P ++ E + F + E T I ++ +
Sbjct: 166 ---LIRLAPREVVLPHSLWQDEGVK-----------------KSFQELEGTT--ITSLAD 203
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+I + + QA+ L C V A GG L Y
Sbjct: 204 QIFTQEQAQQALTEHFGQAKTTALDCW------------QSPAVCGAAGGLLHY------ 245
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
LL K +L + + YM+LD A NLE+ ++ R G G+L + L+
Sbjct: 246 ---LLETQKRKLQHITEITSYFTQSYMILDGIARRNLEICKSLRDGGKKGSLLSVLDLTR 302
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
+A G R+L+ WL +PL + I ER DAV L V+ E AL + DMERL AR
Sbjct: 303 SAMGGRMLKAWLEQPLIDIKAINERLDAVQEL--VDSVLLRDELATALKNVYDMERLTAR 360
Query: 740 LFASSEANGRN 750
A AN R+
Sbjct: 361 A-AYGSANARD 370
>gi|451848741|gb|EMD62046.1| hypothetical protein COCSADRAFT_147401 [Cochliobolus sativus
ND90Pr]
Length = 1144
Score = 140 bits (352), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 161/670 (24%), Positives = 280/670 (41%), Gaps = 88/670 (13%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KH+D +I ++G Y+ F DA + +KEL + + G E P
Sbjct: 243 QYLDIKRKHLDTIIVMEVGYKYKFFGEDARIASKELGIVCIPGKFRYDEHPSEAHLDKFA 302
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
FP ++V++L + ++V VV Q ET + +++ R++ + TKG
Sbjct: 303 SASFPTHRLQVHVKRLVQANHKVGVVRQVETAA----LKAAGNNRNAPFVRKLTNLYTKG 358
Query: 439 TL----------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
T TEG SA YL+ +TESN G+ V AT II
Sbjct: 359 TYVDDVEGLETPTEGSGASAQ-STGYLLCITESNAKGWGTDEKVQVGLVAVQPATGDIIY 417
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFW 546
D S + L + P E + + LS T + I L ++ + D +
Sbjct: 418 DDFEDGFMRSEIETRLLHIAPAEFLVVGD-LSKATNKLIEHLSASKTNVFGDRSRVERVE 476
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+T + + + A + S A+S+ +G +L ++ + + LS
Sbjct: 477 KPKTMAAQAHSHISNFYAGKMK--SSTDADSEKQG-------AVLDKVHQLSEHVTICLS 527
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
A+ + YL + L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 528 AM---ITYLSEYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDY 576
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRK 725
S G+L+ +N T FG+RLLR W+ RPL + + ER AV L+ ++ +
Sbjct: 577 TSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKVKLEERIAAVEELKEGEHTIPVDKLKF 636
Query: 726 ALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
L + D+E++L R++ Y+ + +L + AL E+ Q S+
Sbjct: 637 VLGEIKTDLEKVLIRIY---------------YKKCTRPELLSALQALQ--EISSQYLSA 679
Query: 785 LGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRII----PHGGVD 839
+S L +L+ +P I L F D + A + + H D
Sbjct: 680 QTP----EQSGFLSTLLSEAVSNVPKIYEDLNGFLDKINASAAKDDDKYSFFREEHEAED 735
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLRGSVP 895
+ + + +E L+ H KE LG + + YVT+ YL+EV PE + VP
Sbjct: 736 I--NDLKLSIASVEDDLSTHRKEAAAKLGKSKVDYVTVAGIEYLIEVKRKSPEEKK--VP 791
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
++ S+ K R+ TP +K++L E Q + +A RL+ + + + R +
Sbjct: 792 ASWQQISATKATLRFHTPEVKRMLQERDQYKESLAAACDRAYMRLLEEISSKYQQLRDCI 851
Query: 956 AATAGLTLIL 965
A+ A L +L
Sbjct: 852 ASLATLDALL 861
>gi|363744798|ref|XP_003643127.1| PREDICTED: DNA mismatch repair protein Msh3-like [Gallus gallus]
Length = 1090
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 159/670 (23%), Positives = 285/670 (42%), Gaps = 87/670 (12%)
Query: 315 RTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK 374
+T+Y P + Q+ E K ++ D ++ + G Y F DA + +KEL++
Sbjct: 178 KTIYTPLEL---------QFIEMKKRYKDAILCVECGYKYRFFGEDAEIASKELNIC--- 225
Query: 375 GEQPH----CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
Q H P ++V +L KG++V V++Q ET + +K + R+
Sbjct: 226 CHQDHNFMTASIPTHRLFVHVRRLVAKGHKVGVIKQMETAA----LKAAGENKSSLFSRK 281
Query: 431 ICAVVTKGTL--------------TEGELLSANPDASYLMALTESNQSPASQST-DRCFG 475
+ A+ TK TL + E ++ + +YL+ + E+ ++ ++ D G
Sbjct: 282 LTALYTKSTLIGEDVNPLLKLDDSVDVEEVTTDVPDNYLLCICENGENVKNRKKGDIVIG 341
Query: 476 ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL 535
+ + T ++ D L L L+PVE+I P++ LS ++E+ I T L
Sbjct: 342 VMAIQPTTGEVVFDSFGDCASRLELESRLLRLQPVELILPSS-LSDQSEKLINSVTSMRL 400
Query: 536 VNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELI 595
+D + + + E N + +T A + G P LS ++
Sbjct: 401 RDDRIRVERMKNYH---FEYSNAFQLVT--------DFYAKEVPDITG----PQKLSVIL 445
Query: 596 STGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALE 655
S V+ AL + YLK+ L++ L + F+ L ++ YM ++ ++
Sbjct: 446 SLDKP---VICALAAVITYLKEFNLEKMLYNPSNFKQLS-------SETEYMTINGTTMK 495
Query: 656 NLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV 715
NLE+ +N + G+L L+H T+FG+R L+ W+ +PL I R DAV+ +
Sbjct: 496 NLEILQNQTDLKTKGSLLWVLDHTKTSFGRRRLKKWVIQPLMKCSEINARLDAVSEILLS 555
Query: 716 NQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC 775
+ + L +LPD+ER L +F K QEF +
Sbjct: 556 ESSVFGQIQNLLCKLPDLERGLCSVFHK------------------KCSTQEFFLIVSTL 597
Query: 776 ELMDQACSSLGAILE-NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIP 834
+D +L ++ + +S L + L +P ++S +KH+ + EA +G
Sbjct: 598 SRLDSEIQALVPVIHSHVKSPLLQNALLE---IPELLSPVKHYLKILNE-EAAKTGDKTQ 653
Query: 835 HGGVDMDYDSACKKVKEIEASLTK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLR 891
D+ KK +EI L+K HL E RK + + S YVT+ +L+EV S
Sbjct: 654 LFKDLTDFPVIRKKKEEILDVLSKIQLHLLEIRKQIKNPSAEYVTVSGQEFLVEVKNSHI 713
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
SVP ++ + SS K R+ +P I + L+Q + + R + F EH++
Sbjct: 714 SSVPSNWVMVSSTKAVSRFHSPFITENYRHLNQLREQLVLDCGAEWLRFLDHFSEHYHTV 773
Query: 952 RQMVAATAGL 961
+ + A +
Sbjct: 774 SKAIGHLATI 783
>gi|134299738|ref|YP_001113234.1| DNA mismatch repair protein MutS [Desulfotomaculum reducens MI-1]
gi|189030714|sp|A4J5Q6.1|MUTS_DESRM RecName: Full=DNA mismatch repair protein MutS
gi|134052438|gb|ABO50409.1| DNA mismatch repair protein MutS [Desulfotomaculum reducens MI-1]
Length = 868
Score = 139 bits (349), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 165/610 (27%), Positives = 265/610 (43%), Gaps = 119/610 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGE---QPHC 380
L+ +Q+ + K +H + ++FF++G FYE+F DA + ++EL++ GE P C
Sbjct: 3 LTPMMQQYLDIKKQHPNTILFFRLGDFYEMFFEDAKLASQELEITLTGRDAGEPERVPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY+V + EQ E P + KG +VKRE+ V+T GTL
Sbjct: 63 GVPFHAADSYISKLIEKGYKVAICEQVEDP------KVTKG----IVKREVIRVITPGTL 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+G +LS D +YL+A++++ S++ C G+ V D++T + ++ L
Sbjct: 113 MDGSMLS-EKDNNYLVAISQT-------SSNNC-GMAVADLSTGLFQVTEMEGHWSLESL 163
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+ L P E+ +L+P+ + +H + + +P + F TT+ E + + +
Sbjct: 164 LDEILRLTPREV-----LLTPDLK----KHEKTVQAFNFLPSTVF----TTLEETQQVSD 210
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
I E LN ++ + C+ A G L YL +
Sbjct: 211 YI--ELLNNQFGQKVSAVYKDRPAVCM-------------------AAGILLQYLINT-- 247
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K +L + + + YM+LD A NLE+ ++ R GD GTL L+
Sbjct: 248 -------QKRQLNHITEITAYSPRAYMMLDGIARRNLEISKSLRDGDKRGTLLWVLDATK 300
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
TA G R+L+ WL +PL ++ I+ER DAV L VN E AL ++ D+ERL AR
Sbjct: 301 TAMGGRMLKNWLEQPLIDTLKIQERLDAVEEL--VNSILLREEISGALKQIYDLERLAAR 358
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTESRQLH 798
A ANGR+ + AL G E + +L A+ S +L
Sbjct: 359 A-AYGSANGRD------------------MIALRGSLEKLPFIHDALAAV----SSTRLK 395
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-----DMDYD---SACKKVK 850
I T + L + D A N + GG+ D + D +A + K
Sbjct: 396 RIYTE-------FNTLSDLRKVLDLALAENPPVSLRDGGLIKDGFDQEVDQLRNAARDGK 448
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
A L KE +T I + +G + Y LEV + VP Y+ R +
Sbjct: 449 TWLAGLEAREKE------NTGIKNLKVGFNKVFGYYLEVTRANLSMVPEYYQRRQTLANA 502
Query: 908 FRYWTPNIKK 917
R+ TP +K+
Sbjct: 503 ERFITPELKE 512
>gi|420155624|ref|ZP_14662482.1| DNA mismatch repair protein MutS [Clostridium sp. MSTE9]
gi|394758853|gb|EJF41689.1| DNA mismatch repair protein MutS [Clostridium sp. MSTE9]
Length = 871
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 165/652 (25%), Positives = 278/652 (42%), Gaps = 100/652 (15%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQ--- 377
+ +LS KQ++E K ++ D ++FF++G FYE+F DA + ++EL+L G++
Sbjct: 1 MADLSPMMKQYFEIKEQNPDTLLFFRLGDFYEMFFEDAKLASRELELTLTGRDCGQEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + +L KGY+V + EQ E P KG +VKR + V+T
Sbjct: 61 PMCGVPFHSAESYIARLVAKGYKVAICEQMEDPAL------AKG----LVKRAVIRVITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ E +L +++N + + + G+C D++T + +++ D
Sbjct: 111 GTVMESSMLDE----------SKNNFICSVFAGEHAAGVCFADISTGELRATELLAD--- 157
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE-TTVLEIK 556
L L S++R N L+ + R IL NP + L +F + + LE
Sbjct: 158 -SLQELESQVR--------NELARFSPREILI---NPQTLQMTGLGKFIKEKLSAALECL 205
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
AE L KA + + + G++ P A+G L YLK
Sbjct: 206 PQEETTGAEQLLKA--QFSPERLDSSGVSAYP--------------LTAQAVGCLLLYLK 249
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
K+ L R E+ S F M LD A NLE+ E R G+L L
Sbjct: 250 KT-QRTGLERMDTIEMYSGSQF--------MGLDLSARRNLELLETMRGKSKRGSLLWVL 300
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ TA GKRL+R W+ RPL N I RQ+AV L ++ F + LS + D+ERL
Sbjct: 301 DKTKTAMGKRLIRVWIERPLLNPAQILRRQNAVEEL-SMDSMFRDAVAEQLSGIHDLERL 359
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ R ++Y A ++L+ +AL + Q + + L R+
Sbjct: 360 MTR---------------IVYGSANARELRSLCAALSRLPELKQLLGGVSSAL----LRE 400
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEAS 855
+ + P + + A++ + F E G I P ++D + KEI A
Sbjct: 401 IREKIDPLEDVAALIESAIVDEPPFSIREG---GMIRPGYHEELDELRTDMGSGKEIIAQ 457
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L +E+ T I + +G + Y +EV S R VP +Y + + R+ T
Sbjct: 458 LEAGEREK------TGIPKLKVGYNRVFGYYIEVSNSYRDKVPDEYIRKQTLTNCERFIT 511
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
P++K+L G + A + + +++ + + + +A A L ++
Sbjct: 512 PDLKQLEGRILGAHEKSVQLETQLFEQVRAEAASQLERVQATASAVAQLDVL 563
>gi|321253333|ref|XP_003192701.1| hypothetical protein CGB_C2370C [Cryptococcus gattii WM276]
gi|317459170|gb|ADV20914.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1189
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 163/680 (23%), Positives = 276/680 (40%), Gaps = 110/680 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ+ + K ++ D ++ ++G Y+ DA ++EL + FP RNF
Sbjct: 244 EKQFMDIKEQNKDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPSRNFFTA 294
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
++V+KL GY+V V+ QTET +K +++ R++ + T T
Sbjct: 295 SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFTRKLTHLFTAATY 350
Query: 441 TEGELLSAN---------------PDASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
E LS++ P + L+A+ E + AS + +CVV T
Sbjct: 351 VEDPSLSSSSPIRFDDPVIPGTTPPPTNALVAIVEQHADEASDDRVKVGLVCVVP-GTGD 409
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-----------RNP 534
I + D + L L+ L P E++ P LS TE+ + T R
Sbjct: 410 ITWDEFEDSKIRTELETRLAHLSPAELLLPKQKLSKVTEKVLTYFTDEVKYRGSNAVRIE 469
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN-----------------KADSNVANS 577
++D+ +D T K N + N K AN+
Sbjct: 470 RIDDIPEYDAAFDFLTNFYHDKEHRNITSKGDENDERHPMTGGNEQWSLQRKLRQGGANT 529
Query: 578 QAEGDGLTCLPGILSE---LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLP 634
E D L +S +++ D QV+ ++ + Y+K+ L+
Sbjct: 530 SLEMDEKIYLASGVSSGKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFRH-------- 581
Query: 635 CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
S F A + +M+L + L NLE+++N G G+L L+HC T GKRLLR W+ R
Sbjct: 582 TSSFVRFANRSHMLLSSNTLTNLEIYQNQTDGGLYGSLMWLLDHCKTRMGKRLLREWVGR 641
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKV 754
PL + ++ R DA+ + N + R L +PD+ R L R
Sbjct: 642 PLLDVTALKARADAIEEIMENNSYHMEKLRSLLLNMPDLVRGLTR--------------- 686
Query: 755 VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSIL 814
V Y A +L + L L + + G + S L++I LP +++
Sbjct: 687 VQYGKATPNELATLLITL--VRLASEFKPNTGNVF---RSCLLNNI---PNTLPTVLNTS 738
Query: 815 KHFKDAFDWVEA--NNSGRIIPHGGV--DMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
+ F +A + +A N+ + G ++ C V EIE L +HL E RK+L
Sbjct: 739 QRFLNALNLKQARENDEANLWADPGKFPEIQDVKDCICVCEIE--LNEHLMEVRKILKKP 796
Query: 871 SITYVTIGKDLYLLEVPESLRGS-VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
++ Y+T+ YL+EVP +R + VP + S+ + RY TP I ++ E +Q + +
Sbjct: 797 TLKYITVSGIEYLVEVP--IRDTIVPAQWVKISATRTVNRYHTPKILAIMKERTQHQEKL 854
Query: 930 ESALKSILQRLIGQFCEHHN 949
+ E+H+
Sbjct: 855 SLVAHEAFTAFQSEVAEYHD 874
>gi|301761694|ref|XP_002916275.1| PREDICTED: DNA mismatch repair protein Msh3-like, partial
[Ailuropoda melanoleuca]
Length = 1123
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 146/657 (22%), Positives = 282/657 (42%), Gaps = 80/657 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 223 QYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 282
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 283 RRLVAKGYKVGVVKQTETAA----LKAVGDNRSSLFSRKLTALYTKSTLIGEDVNPLVKV 338
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD--- 493
+ + S+L+ + E+ ++ + F GI V AT ++ D
Sbjct: 339 DDAVNVDEIITDSSTSFLLCICENKENIKDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 398
Query: 494 --DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+L+ +LC L+PVE++ P++ LS +TE I R T + +D + + +
Sbjct: 399 RSELETRILC-----LQPVELLLPSH-LSEQTEALIHRATAASVRDDRIRVERM---DNM 449
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ + + +T E K ++ SQ+ GI+ + V+ +L
Sbjct: 450 YFDYSHAFQAVT-EFYAKDAVDIQASQS-------FSGII-------NLEKPVICSLAAI 494
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N + G+
Sbjct: 495 IRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEILQNQTDMKTKGS 547
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LP
Sbjct: 548 LLWVLDHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLP 607
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER L ++ ++ + ++ + L+ + QA + A+ +
Sbjct: 608 DIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IPAVNSH 650
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--- 848
S L + +P ++S ++H+ + A + + D+ K+
Sbjct: 651 VRSDLLQTFILE---IPELLSPVEHYLRILNEQAAKTGDKTELFKDL-TDFPLIKKRKDE 706
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++E+ + HL+E RK+L + SI YVT+ +++E+ S +P D+ S K
Sbjct: 707 IQEVTDKIQIHLQEIRKILKNPSIRYVTVSGQEFMIEMKNSAVSCIPTDWVKVGSTKAVS 766
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ +P I + L+Q + + + F EH++ + V A + I
Sbjct: 767 RFHSPFIVENYRHLNQLREQLVLDCSAEWLDFLENFSEHYHSLCKAVHHLATIDCIF 823
>gi|354491562|ref|XP_003507924.1| PREDICTED: DNA mismatch repair protein Msh3 [Cricetulus griseus]
Length = 1075
Score = 138 bits (347), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 159/653 (24%), Positives = 273/653 (41%), Gaps = 72/653 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K KH D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 179 QYIDVKQKHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 238
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+Q ET + +K V R++ A+ TK TL GE +
Sbjct: 239 RRLVAKGYKVGVVKQMETAA----LKAIGDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 293
Query: 447 ---SANPD-------ASYLMALTESNQ-SPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
S N D SYL+ + E + S + + GI V AT ++ D
Sbjct: 294 LDDSVNIDEVMTETSTSYLLCIYEEKENSKDKKKGNISIGIVGVQPATGEVVYDCFQDSA 353
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P++ LS TE I R T + +D + + + T E
Sbjct: 354 SRLELETRISSLQPVELLLPSH-LSELTEMLIHRATAVSIRDDRIRVERM---DNTYFEY 409
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G GI+ + V+ +L + YL
Sbjct: 410 SHAFQAVT--------EFYAREVVDSKGSQNFSGII-------NLEKPVICSLAAIIRYL 454
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 455 KEFNLEKILSKPENFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 507
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DA++ + + L +LPD+ER
Sbjct: 508 LDHTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESSVFEQIENHLRKLPDIER 567
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFI---SALHGCELMDQACSSLGAILENT 792
L ++ + + + +V K +LQ I S+L +L+ A+L
Sbjct: 568 GLCSIY-HKKCSTQEFFLIVKSLSHLKSELQALIPAVSSLVQSDLLQTLILETPALLSPV 626
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
E H++ + + + FKD D+ P D +++E+
Sbjct: 627 E----HYLKILNEQAAKVGDKTELFKDLTDF----------PLIKKRKD------EIQEV 666
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
S+ HL+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 667 TQSIQMHLQELRKMLNRPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFHP 726
Query: 913 PNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
P I + L+Q + + + F EH++ + V A + I
Sbjct: 727 PFIVENYRRLNQLREQLVLDCSAEWLDFLENFGEHYHTLCKAVNHLATVDCIF 779
>gi|410671188|ref|YP_006923559.1| DNA mismatch repair protein [Methanolobus psychrophilus R15]
gi|409170316|gb|AFV24191.1| DNA mismatch repair protein [Methanolobus psychrophilus R15]
Length = 887
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 175/660 (26%), Positives = 282/660 (42%), Gaps = 112/660 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY-MKG------E 376
+ ++ +Q++ K +H D +IFF+MG FYE F DA A+EL++ +G +
Sbjct: 1 MNQITPAMQQFYSAKEEHGDALIFFRMGDFYESFGEDAKTIARELEITLTTRGRDKDGKD 60
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + +L +KGY+V + EQ E P+ VVKR + VVT
Sbjct: 61 MPLAGIPYHAIDNYLPRLIKKGYKVAICEQLEDPKL----------AKGVVKRGVVRVVT 110
Query: 437 KGTLTEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
GT + + PDAS YLMAL + FGI +D++T + Q+ D
Sbjct: 111 PGTAMDPSMF---PDASNNYLMALYGEGKD---------FGIAFLDISTGEFLTTQLADS 158
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPE--TERAILRHTRNPLVNDLVPLSEFWDAETTV 552
+ + + P E I PA ML+ E ER + +L + ++ + V
Sbjct: 159 SPYDRIASEAARMGPSECIMPAAMLADEKLVER----------IRELKIIIHKYEEDAFV 208
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
+ +A+ + + V S EG G + LP +S+ G L
Sbjct: 209 HD--------SADKVLREHFKV--STLEGMGCSGLPF--------------AVSSAGAAL 244
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
Y +T +R EL +MVLDA L NLE+ +N R S TL
Sbjct: 245 QYAI-----DTQMR----ELSQVQHLKTYFDSEFMVLDAITLRNLEIVKNVRGEGSDSTL 295
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
L+ T G RLL+ WL +PL + I R DAV+ L G N + R LS + D
Sbjct: 296 LNVLDETRTPMGGRLLQKWLLKPLVSVDDINYRLDAVSQLLG-NTLVRFDLRSHLSYVKD 354
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC---ELMDQACSSLGAIL 789
MERL+ R+ + +N R+ ++ + + + + + ++ GC EL+D S L +
Sbjct: 355 MERLVGRVLYGN-SNARD----LVALRRSMEAVPQIVDSMRGCGKSELLDDIVSQLSSF- 408
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
TE +L ++ VS+ G +I G Y+ ++
Sbjct: 409 --TELEELTELIGRAIVDEPPVSV--------------RDGGMIKSG-----YNERLDEL 447
Query: 850 KEIEASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKK 905
+ + S + E Q+K T I + +G + Y LE+ ++ VP DY + +
Sbjct: 448 RGLSKSGKHWIAEFQQKERDRTGIKSLKVGYNKVFGYYLEITKANISQVPDDYIRKQTMT 507
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R++TP +K+ ++ A+ EK AL+ L + H+K Q AAT G+ +L
Sbjct: 508 NAERFYTPQLKERESDILSAD-EKMVALEYELLCEVNAVVASHSKQLQDTAATIGMLDVL 566
>gi|91773655|ref|YP_566347.1| DNA mismatch repair protein MutS [Methanococcoides burtonii DSM
6242]
gi|121691668|sp|Q12VC9.1|MUTS_METBU RecName: Full=DNA mismatch repair protein MutS
gi|91712670|gb|ABE52597.1| DNA mismatch repair protein MutS [Methanococcoides burtonii DSM
6242]
Length = 887
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 163/647 (25%), Positives = 273/647 (42%), Gaps = 102/647 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ-PH 379
L+ KQ+++ K +H D +IFF+MG FYE F DA + AKEL++ ++GE+ P
Sbjct: 4 LTPAMKQYYDAKKQHSDALIFFRMGDFYESFGEDAKIIAKELEITLTTRGKDIEGEKMPL 63
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + +L +KGY+V + EQ E P +K KG ++KR + VVT GT
Sbjct: 64 AGIPYHALDNYLPRLIKKGYKVAICEQLEDP------KKAKG----IIKRGVVRVVTPGT 113
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ + + +P +YLM+++ D +G+ +DV+T + Q D
Sbjct: 114 AIDTSMFT-DPSNNYLMSIS---------GGDGDYGVSFLDVSTGEFLTTQFADKSPYDR 163
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + +RP E I M S E L+ N LV E +D +++ ++ +
Sbjct: 164 IASEAARMRPSECIISRTMFSDERLVERLKEL-NVLVQGFK--DEAFDVDSSRKLLERHF 220
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
N S EG G LP +T +G+ + AL
Sbjct: 221 NV---------------STLEGMGCAGLP------YATSSAGAALDYAL----------- 248
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
T +R EL S + +M+LD+ L NLE+ +N R + ++ L+
Sbjct: 249 --TTQMR----ELGHVSELSTYSDSEFMMLDSITLRNLEIVKNVRGEGNDTSILKVLDDT 302
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
T G RLL+ WL +PL N I R DA+ L + + R LS + D+ERL+ R
Sbjct: 303 NTPMGGRLLQKWLLKPLINVDSIDHRLDALECLAN-DTMLRFDVRSHLSFVKDIERLIGR 361
Query: 740 -LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
++ +S A + K L + Q+ E + GCE++ L
Sbjct: 362 VVYGNSNARDLIALKRSL---GSVPQIVESMGDDPGCEMLINIRDGL------------- 405
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEASLT 857
G + +I+K DA + + GG + Y+ ++K +
Sbjct: 406 ------LGFEQLENIVKLIDDAI----VDEPPVSVREGGMIRSGYNEKLDELKGMSTGGK 455
Query: 858 KHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ Q+K T I + +G + Y +E+ +S +P DY + + + R++TP
Sbjct: 456 TWIASFQQKERDRTGIKSLKVGYNRVFGYYIEITKSNIAQIPDDYIRKQTMRNAERFYTP 515
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG 960
+K+ + A+ EK +AL++ L I H Q +A G
Sbjct: 516 ELKEWEDVILSAD-EKITALENELFTEITSRIASHASDLQRIAVLIG 561
>gi|68299763|ref|NP_034959.2| DNA mismatch repair protein Msh3 [Mus musculus]
Length = 1095
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 154/654 (23%), Positives = 274/654 (41%), Gaps = 74/654 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAA----LKAIGDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + GI V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGIVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSVP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ P ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIVEA---PELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 679
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 680 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 739
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
P I + L+Q + + + F EH++ + V A + I
Sbjct: 740 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIF 793
>gi|254479232|ref|ZP_05092577.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
gi|214034833|gb|EEB75562.1| DNA mismatch repair protein MutS [Carboxydibrachium pacificum DSM
12653]
Length = 866
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 156/597 (26%), Positives = 257/597 (43%), Gaps = 103/597 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLVKKGYKVAICEQLEDPS------KAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKSN-NYLVSVYREKDN---------YGICAVDVTTGELYATEIKNCKDGKRIYDEIA 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII L + ++ N VN PL+ ++A + ++E
Sbjct: 168 KYSPSEIISNEEFLKNNKYIKVFKNN-NCAVNAYKPLN--YEASSELIE----------- 213
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ D V + E V+ +LG L YLK+ L +T L
Sbjct: 214 --KQFDKKVEELELEDKKF-------------------VIHSLGALLSYLKE--LQKTSL 250
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ + + + D YM LD+ A+ NLE+ E++R+ G+L L+ VT G
Sbjct: 251 K----HINKLTLYQD---NSYMGLDSNAIRNLEILESNRNKSKKGSLLGVLDRTVTPMGG 303
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL + I +R DAV L N +E ++ L+++ D+ERL ++
Sbjct: 304 RLLKKWLEEPLIDKDEIEKRLDAVEELFN-NYRERIELKELLNKVYDLERLASK------ 356
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + IL SR L I
Sbjct: 357 ---------IVYQSVTPK---DFIS----IKLSLQNLPKIKNILSKFSSRLLKEIYEKLD 400
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
L + ++ K KD D G II G +M D K E + + E+R
Sbjct: 401 VLQDVYELIDKSIKD--DPSNQLKEGNIIKDGYNEM-VDKLRKASTEGKNWIANLEAEER 457
Query: 865 KLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+ T I + IG + Y +EV +S VP Y + + RY TP +K++
Sbjct: 458 E---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEI 511
>gi|149727014|ref|XP_001503905.1| PREDICTED: DNA mismatch repair protein Msh3 [Equus caballus]
Length = 1128
Score = 137 bits (344), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 147/652 (22%), Positives = 276/652 (42%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 227 QYIEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 286
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 287 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSLFSRKLTALYTKSTLIGEDVNPLVKL 342
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ + E+ ++ + F G+ V AT ++ D
Sbjct: 343 DDAVNVDEIITDTSTSYLLCICENKENVKDKKKGNIFIGLVGVQPATGEVVFDSFQDSAS 402
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L + L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 403 RSELETRILSLQPVELLLPST-LSEQTELLIRRATAVSVRDDRIRVERM---DNMYFEYS 458
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K +V SQ+ GI+ + V+ +L + YLK
Sbjct: 459 HAFQMVT-EFYAKDVVDVKGSQS-------FSGII-------NLEKAVICSLAAIIRYLK 503
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
L++ L + F+ G+M +M ++ L NLE+ +N + G+L L
Sbjct: 504 DFNLEKVLSKPKNFKQFS----GEME---FMTINGTTLRNLEILQNQTDMKTKGSLLWVL 556
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H TAFG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 557 DHTKTAFGRRKLKKWVTQPLLKIRDINARLDAVSEVLYSESSVFGQIENHLRKLPDIERG 616
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + LH + QA + A+ + +S
Sbjct: 617 LCSIY---------------HKKCSTQEFFLIVKTLHHLKSEFQAL--VPAVNSHVQSDL 659
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKEIE 853
L + +P ++S ++ + + A + + D+ K+ ++E+
Sbjct: 660 LRTFILE---IPELLSPVERYLKILNEQAAKIGDKTELFKDLS-DFPLIKKRKDEIQEVT 715
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ +HL+E RK++ + S YVT+ +L+EV S +P D+ S K R+ +P
Sbjct: 716 HRIQRHLQEIRKIIKNPSAQYVTVSGQEFLIEVKNSAVSCIPTDWVKIGSTKAVSRFHSP 775
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ + L+Q + + + F EH++ + V A + I
Sbjct: 776 FVVENYRHLNQLREQLVLDCSAEWLEFLENFSEHYHSLCKAVHHLATVDCIF 827
>gi|187956273|gb|AAI50760.1| MutS homolog 3 (E. coli) [Mus musculus]
Length = 1095
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 153/654 (23%), Positives = 274/654 (41%), Gaps = 74/654 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAA----LKAIGDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + G+ V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDISTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSVP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ P ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIVEA---PELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 679
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 680 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 739
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
P I + L+Q + + + F EH++ + V A + I
Sbjct: 740 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIF 793
>gi|291542654|emb|CBL15764.1| DNA mismatch repair protein MutS [Ruminococcus bromii L2-63]
Length = 859
Score = 136 bits (342), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 151/604 (25%), Positives = 256/604 (42%), Gaps = 100/604 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KGEQ-PHCGFPER 385
+Q+++ K ++ D ++FF++G FYE+F DA + +KEL+L + E+ P CG P
Sbjct: 3 QQYFKIKEENKDSILFFRLGDFYEMFYDDAKLASKELELTLTGRDCGQAERAPMCGVPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L KGY+V + EQTE P K KG +VKR+I V+T GT+ E +
Sbjct: 63 SCEGYIARLVAKGYKVAICEQTEDPA------KAKG----LVKRDIIRVITPGTVMESSM 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + + +Y+ + N++ G+C D++T + ++ + +VL L+
Sbjct: 113 LDESKN-NYICCMYSKNKT---------IGLCFCDISTGELYATEIRGNDSYNVLTNQLT 162
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P EI+ +++ L L +F A+ + ++ + + E
Sbjct: 163 SYNPREILIGGDIVK------------------LKELPKFIKAKLSA-GVEMLEDEKFDE 203
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S+ ++V SQ E + ST S V+ LG L YL+ + L
Sbjct: 204 SVC---TDVVKSQFEDE------------YSTVSDKSVVVCVLGALLSYLRDT-QKTGLE 247
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
R E + YM LD NLE+ + + D G+L L+ TA GK
Sbjct: 248 RINHIEFYK--------ENQYMSLDYNTQRNLELTQTMLTKDKKGSLLWVLDKTKTAMGK 299
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RL+R+WL PL N I RQ A+ L N ++ LS + D+ERL+ R
Sbjct: 300 RLMRSWLEHPLLNITSINNRQSAIEELVNDNM-LRMDVTDTLSGIFDIERLMTR------ 352
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y A + L+ A+ Q + +L + +S L +I
Sbjct: 353 ---------IVYGSANARDLRSLCGAI-------QNLPQISDLLVDCKSVYLKYIYKSID 396
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
L I S++ G I G + + DS + + + L + EQR
Sbjct: 397 KLEDIHSLIDSAIVEEPPFTVREGGMI--KRGYNEELDSVTGDMNDSKGILARIEAEQRD 454
Query: 866 LLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+ G I + +G + Y +EV S + VP Y + + RY T ++K + G +
Sbjct: 455 ITG---IPKLKVGYNRVFGYYIEVSNSYKSMVPETYIRKQTLTNCERYITQDLKDVEGRI 511
Query: 923 SQAE 926
A+
Sbjct: 512 LGAK 515
>gi|403416984|emb|CCM03684.1| predicted protein [Fibroporia radiculosa]
Length = 1089
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 157/621 (25%), Positives = 261/621 (42%), Gaps = 103/621 (16%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFS---- 388
Q + K+KH ++ ++G F DA + KEL FP RNFS
Sbjct: 206 QVLDLKAKHPGTLLMVEVGYRMNFFGEDAEIVGKELGF---------VCFPSRNFSSAAM 256
Query: 389 -------MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVV-KREICAVVTKGTL 440
++++KL KGY+V +VEQTET K+ G KV+ R++ + T T
Sbjct: 257 IPVHRQEVHLKKLLSKGYKVGIVEQTETAAL-----KKVGDNRKVLFTRKLTHLYTAATY 311
Query: 441 TEGELLSANPD------ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
E EL S PD A LM L E + G+ V+ +T ++ + D+
Sbjct: 312 IE-ELDS--PDDLEPATAPPLMCLVEELKGGMGADERVQIGMIVICPSTGDVVWDEFEDN 368
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTR--NPLVNDLVPLSEFWDAETTV 552
+ L + +P E++ P LS +E+ ++ T NPL + E + + T
Sbjct: 369 HMRTELETRMVHSKPYELLLPEGRLSNPSEKLLVYFTEQPNPLTAEHQIRVERFKQDLTY 428
Query: 553 LEIKNIYNRITAESLNKADSNVA-NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E ++ +T +K+ S A +S G + + G V++AL T
Sbjct: 429 TEA---FSYLTDFYSDKSKSAFASDSYNTGKLMAAVTGF----------PKLVVAALAYT 475
Query: 612 LFYLKKSFLDETLLRFAKFELLPC----SGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ YL A F++ C + F A++ +M+L+ L NLE++ N
Sbjct: 476 IKYL------------ANFDIENCLVETNFFTKFAERTHMLLNGNTLTNLEIYRNETDYT 523
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
+ G+L L+H T FG R+LR+W+ RPL N +++ER AV + P R+ L
Sbjct: 524 TKGSLIWILDHTSTKFGARMLRSWVGRPLTNVKILKERISAVEEILADGTPKLTHLRELL 583
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
RLPD+ + L R + Y ++L + A S + A
Sbjct: 584 RRLPDLAKGLCR---------------IQYGKCTPQELAVLLPAF----------SKIAA 618
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM------- 840
+ LH K L IV+ L + ++ + + A+ S ++ G +
Sbjct: 619 AFQPING--LHDAPFKSKILNEIVAALPNLREPMNELMASISLKMAKEGKKEALWADPDK 676
Query: 841 --DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
+ DS ++ +E+ L LK R+ + ++ Y T + YL+E+ + +P +
Sbjct: 677 YPEIDSITVSIQIVESELMDELKNIRRRIKKPALMYGTWNGEEYLVEIRKDENREIPVTW 736
Query: 899 ELRSSKKGFFRYWTPNIKKLL 919
L SS K RY TP +KK L
Sbjct: 737 FLVSSTKIMRRYHTPEVKKKL 757
>gi|333978769|ref|YP_004516714.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822250|gb|AEG14913.1| DNA mismatch repair protein mutS [Desulfotomaculum kuznetsovii DSM
6115]
Length = 868
Score = 135 bits (341), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 166/608 (27%), Positives = 246/608 (40%), Gaps = 111/608 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
KQ+ + K + D ++FF++G FYE+F DA V ++EL++ G P CG P
Sbjct: 9 KQYLQIKQNYQDAILFFRLGDFYEMFFDDALVASRELEITLTGRDAGAAGRVPMCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L +GY+V + +Q E P +V+RE+ VVT GT+ E
Sbjct: 69 AADTYIARLIERGYKVAICDQVEDP----------ADARGIVRREVTRVVTPGTIME--- 115
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
++L A+ E + +G+ VVDV T ++ Q+ D D L L
Sbjct: 116 CLEERKHNFLAAVVEKGNA---------YGLAVVDVTTGLFMVTQI-DGRDA--LLDELI 163
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L P E++ P L E A+ +++ FW + R E
Sbjct: 164 RLEPAEVLLPDIPLYRELAGAVKSRLPKAVIS-------FWSPAA--------FER--GE 206
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
++ + GL+ LP +L A GG L YLK +
Sbjct: 207 AVRSLQEQLGTGWTR-SGLSGLP-------------LAILCA-GGMLNYLKAT------- 244
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K EL + + YM LD NLE+ + R G GTL L+H VTA G
Sbjct: 245 --QKRELGQINRVEIYSGGQYMHLDGVTRRNLELTSSLRDGSRWGTLLWVLDHTVTAMGG 302
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLARLFASS 744
RLL++WL RPL + IR RQDAV L VN A E + L + D+ERL +R
Sbjct: 303 RLLKSWLERPLLDVQAIRARQDAVEEL--VNDSLARQELQHLLKTIYDLERLSSR----- 355
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V+Y A + L ++L + +L N ++ I
Sbjct: 356 ----------VVYGTAGPRDLLALKNSL-------AVLPKVKKVLCNKKAPLWQEIAGDL 398
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHG---GVDMDYDSACKKVKEIEASLTKHLK 861
L +V +L DA D + G II G VD A ++ K A L K
Sbjct: 399 DCLEDVVQLLDEAIDA-DPPAGSREGGIIREGYHPEVD-RLRQASREGKNWLAQLEAREK 456
Query: 862 EQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
E+ T I + +G + Y LEV VP DY + + G R+ TP +K+L
Sbjct: 457 ER------TGIRSLKVGFNKVFGYYLEVTRPNLDLVPADYIRKQTLAGAERFITPELKEL 510
Query: 919 LGELSQAE 926
++ AE
Sbjct: 511 EEQILGAE 518
>gi|449543528|gb|EMD34504.1| hypothetical protein CERSUDRAFT_97762 [Ceriporiopsis subvermispora
B]
Length = 1096
Score = 135 bits (341), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 160/657 (24%), Positives = 280/657 (42%), Gaps = 66/657 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q + K+K+ ++ ++G +E DA + +KEL + Y K P +++
Sbjct: 209 QIRDLKAKYPGILLMVEVGYKIIFYEDDARIASKELGIMCYPKRNFMQASIPVHRKEVHL 268
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG-----ELL 446
+KL +GY+V +VEQTET +K ++ RE+ + T T + +L
Sbjct: 269 KKLLSQGYKVGIVEQTETAAL----KKVGDNRGAPFTRELNHLYTSATYVDALNSVDDLE 324
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+P + LM L ES + S I V+ +T +I + D+ L +
Sbjct: 325 PTSPPS--LMCLVESLRGGMSVDERVSVAIVVITPSTGDVIWDEFEDNSMRIELETRMVH 382
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
+RP E++ PA+ LS TE+ I N + + + + + DA L + ++
Sbjct: 383 MRPQELLLPASKLSRSTEKLISYTAENAVSDQKIRIERYEDA----LSYTDAFS-----V 433
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
L+K ++ A +G T G L + S D Q AL ++ YL +++ LL
Sbjct: 434 LSKFYADDTKFAAASEGFTS--GKL--MASIADFPKQAAMALAHSVQYLSGFGVEDCLLE 489
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
KF F ++ +M+L+ L NLE++ N G+L L+ T FG R
Sbjct: 490 -TKF-------FAKFTERTHMLLNGNTLTNLEIYRNETDYTPKGSLMWILDRTTTKFGAR 541
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA 746
LR W+ RPL +S ++R+R +A+ + P R+ L RLPD+ R L R
Sbjct: 542 TLRQWVGRPLVDSTVLRQRAEAIDEIIRDTSPRLTLLRQLLKRLPDLARGLCR------- 594
Query: 747 NGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG 806
+ Y ++L + A A GA + +S+ L+ I T
Sbjct: 595 --------IQYGKCTPQELAVLLRAFERIAATFNAADP-GA-RPSFKSQLLNDIFTT--- 641
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM--DYDSACKKVKEIEASLTKHLKEQR 864
LP + + + D +A+ + ++ + D+ ++ +E L LK R
Sbjct: 642 LPKLKEPILSLLEDVDLKKASEGDKEQMWSDLEKYPEMDNLTLSIQVLETELMDELKNIR 701
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
K+L ++TY + YL+EV ++ +P + + S + R+ TP + ++L + +Q
Sbjct: 702 KILKKPALTYTANAGEEYLIEVKKNENREIPPQWTMVSGTRSVRRFRTPELIQVLAKRAQ 761
Query: 925 AESEKESALKSILQRLIGQFC-----EHHNKWRQMV--AATAGLTLILLDGSLLHAF 974
+ AL + QR+ F EH+ R V A A L L +LL +
Sbjct: 762 C----KEALAAEAQRIYLAFLKRISQEHYGLLRDTVNKLAVADCLLSLAQVALLEGY 814
>gi|344272419|ref|XP_003408029.1| PREDICTED: DNA mismatch repair protein Msh3 [Loxodonta africana]
Length = 1111
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 152/659 (23%), Positives = 277/659 (42%), Gaps = 84/659 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D ++F + G Y F DA + A+EL++ ++ P ++V
Sbjct: 212 QYIEMKQQHKDVILFVECGYKYRFFGDDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 271
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + ++ V R++ A+ TK TL GE +
Sbjct: 272 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSTVFSRKLTALYTKSTLI-GEDVNPLIK 326
Query: 447 ---SANPD-------ASYLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMD-- 493
+ N D +YL+ + E+ + + GI V AT ++ D
Sbjct: 327 LDDAVNVDEIITDTYTNYLLCICENRDTVKDKKKGTISIGIVGVQPATGEVVFDSFQDSA 386
Query: 494 ---DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
+L+ +LC L+PVE++ P+ LS +T I R T + +D +
Sbjct: 387 SRSELETRILC-----LQPVELLLPSG-LSEQTATLIRRVTAASVRDDRI---------- 430
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
V + NIY + + A + G GI+ + V+ +L
Sbjct: 431 RVERMDNIYFEYSC-AFQTVIDFYAYDIVDAKGSQNFSGIM-------NLEKPVICSLAA 482
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
+ YLK+ L++ L + F+ L ++ +M ++ L NLE+ +N + + G
Sbjct: 483 IIRYLKEFNLEKMLSKPKNFKQLS-------SEMEFMTINGTTLRNLEILQNQANMKTHG 535
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRL 730
+L L+H T+FG+R L+ W+ +PL I R DAV+ + + L +L
Sbjct: 536 SLLWVLDHTKTSFGRRKLKKWVTQPLLKLREINTRLDAVSEVLHSESTVFGQIENHLRKL 595
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
PD+ER L ++ ++ + ++ + L+ LM + S + A
Sbjct: 596 PDIERGLCSIY---------------HKKCSTQEFFLIVKTLY--HLMLEFQSLIPAANS 638
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK-- 848
+ +S+ L + +P ++S ++H+ + A + D+ KK
Sbjct: 639 HIQSQLLQTFILE---IPELLSPVEHYLKILNEHAAKIGDKT--ELFKDLSNFPLIKKRK 693
Query: 849 --VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
++EI + HL+E R++L + S YVT+ +++EV S +P D+ S K
Sbjct: 694 EEIQEITNKIQIHLQEIRRILKNPSAQYVTVSGQEFMIEVKNSALSCIPTDWVKVGSTKA 753
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ +P I + L+Q + + + F EH++ V A + I
Sbjct: 754 VSRFHSPFIVENYRHLNQLREQLVLDCSTEWLGFLENFNEHYHSLCNAVYHLATIDCIF 812
>gi|294496664|ref|YP_003543157.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
gi|292667663|gb|ADE37512.1| DNA mismatch repair protein MutS [Methanohalophilus mahii DSM 5219]
Length = 881
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 179/652 (27%), Positives = 272/652 (41%), Gaps = 107/652 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQ 377
+ ++ +Q++ K +H D +IFF+MG FYE F DA A+ELD+ GE+
Sbjct: 1 MSKITPAMQQYYAAKEQHPDSLIFFRMGDFYESFGEDAKTIAQELDITLTTRGKGKDGEK 60
Query: 378 -PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + +L RKGY+V V EQ E P+ + VVKR + VVT
Sbjct: 61 MPLAGIPYHAVDNYLPRLVRKGYKVAVCEQLEDPK----------NAKGVVKRGVVRVVT 110
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT+ + +LS +P +YLMA+ D+ FG+ +DV+T + Q+ D
Sbjct: 111 PGTVIDSSMLS-DPSNNYLMAIA---------GRDKDFGVAFLDVSTGEFLTTQINDQPP 160
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
+ ++ +RP E I ++ E ++ L + + +EF A T
Sbjct: 161 FDGIAGEVARMRPAECIVLPQLMENEELQSRLAELK-------LSTTEFDAASTD----P 209
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+R E L S EG G LP +++ ++ AL L
Sbjct: 210 AYADRHLCEHLGV-------STLEGMGCAGLP--FAKMAAS--------CALEYAL---- 248
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
ET +R EL + +M+LD+ L NLEV +N R T+ L
Sbjct: 249 -----ETQMR----ELNHVQFLHTYSSSEFMILDSITLRNLEVVKNVRGEGRDTTILQVL 299
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ T G RLL+ W+ +PL N I +R DAV L N + R LS + D+ERL
Sbjct: 300 DETKTPMGSRLLQKWILKPLLNVSHINKRLDAVEELSD-NTLLRFDVRSHLSYVKDVERL 358
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ R+ NSN L A KK L QA SL LE
Sbjct: 359 VGRVVYG------NSNARDLV--ALKKSL--------------QAIPSLLETLEGEHKAM 396
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVE----ANNSGRIIPHGGVDMDYDSACKKVKEI 852
L I+ K I ++ + A VE + G +I G Y ++KEI
Sbjct: 397 LARIVQGMKDFREIDTLTDLIERAI--VEEPPLSVREGGLIKPG-----YSEELDELKEI 449
Query: 853 EASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
++ + Q+K T I + +G + Y LEV + VP DY + +
Sbjct: 450 SSNAKSWIASFQQKERDRTGIKSLKVGYNKVIGYYLEVTKPNISQVPDDYIRKQTMTNAE 509
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG 960
R++TP +K G++ A+ EK AL+ L + +H+K Q +A G
Sbjct: 510 RFYTPQLKDWEGKILSAD-EKRVALEYELFNEVISVVANHSKQLQEMAVLLG 560
>gi|328541679|ref|YP_004301788.1| DNA mismatch repair protein mutS [Polymorphum gilvum SL003B-26A1]
gi|326411431|gb|ADZ68494.1| DNA mismatch repair protein mutS [Polymorphum gilvum SL003B-26A1]
Length = 905
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 196/435 (45%), Gaps = 66/435 (15%)
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY 372
DPR PD ++ Q+ E K+ + D ++F++MG FYELF DA V ++ L +
Sbjct: 4 DPRPDAAAPD--ARVTPMMAQYIEIKAANPDSLLFYRMGDFYELFFEDAEVASRALGITL 61
Query: 373 MK-----GEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKV 426
K GE P CG P ++KL G+RV V EQTE P + +++GSK V
Sbjct: 62 TKRGKHLGEDIPMCGVPVHAADDYLQKLIALGHRVAVCEQTEDPAEA----RKRGSK-SV 116
Query: 427 VKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
V+R++ +VT GTLTE LL A + ++L A+T S D FG+ +D++T
Sbjct: 117 VRRDVIRLVTPGTLTEERLLQAGSN-NFLAAVTRLRGG--SSLGDGVFGLAWIDMSTGAF 173
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE-F 545
+ + D L L+++ P E I P ++L + + +R + L P+ F
Sbjct: 174 HVAET----DAGRLAADLAQIDPRETILPDSLL----QESAIRQLFDSFSTALSPVPRAF 225
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
+D T + + + G++ L G G L
Sbjct: 226 FDGSTAADRLASYF-----------------------GVSTLDGF-------GSFSRAEL 255
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
+A G L Y++K+ L E + L P S A + M++D NLE+ + S
Sbjct: 256 AAAAGILAYIEKTQLGE------RPPLDPPS---REAARGTMLIDPATRANLEL-TRTLS 305
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G+ G+L A ++ VT G RLL + LA PL + I R DAV G + R
Sbjct: 306 GERQGSLLAAIDRTVTGAGARLLASRLAGPLTDPQAIARRHDAV-GFFLDEEMMRERLRG 364
Query: 726 ALSRLPDMERLLARL 740
L PD+ R LAR+
Sbjct: 365 ELKAAPDIARALARI 379
>gi|190359894|sp|Q0UXL8.3|MSH3_PHANO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
Length = 1119
Score = 134 bits (337), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 157/658 (23%), Positives = 267/658 (40%), Gaps = 69/658 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KHMD VI ++G ++ F DA +KEL + + G E P
Sbjct: 224 QYLDIKRKHMDTVIVMEVGYKFKFFGEDARTASKELGIVCIPGKFRYDEHPSEAHYDRFA 283
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
FP ++V++L + ++V VV Q ET + +++ R++ + TKG
Sbjct: 284 SASFPVHRLQVHVKRLVKANHKVGVVRQLETAAL----KAAGNNRNTPFVRKLTNLYTKG 339
Query: 439 TLT---EG-ELLSANPDAS-YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T EG E +A A+ YL+ +TE+N G+ V AT II D
Sbjct: 340 TYVDDIEGLETPTAGAQATGYLLCVTETNAKGWGTDEKVQVGLVAVQPATGDIIYDDFED 399
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
S + L + P E + + LS T++ ++ H N S E
Sbjct: 400 GFMRSEIETRLLHIAPAEFLIVGD-LSKATDK-LIHHLSASKTNVFGDRSRVERVEKPKT 457
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
Y+ I+ +K S+ +G IL ++ + + LSA+ +
Sbjct: 458 MAAQAYSHISNFYADKMKSSQEGGSEQG-------AILDKVHQLSEHVTICLSAM---IT 507
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL L E + K+ F + + YM+L+ L +LE+++N S G+L+
Sbjct: 508 YLSDYAL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDYTSKGSLF 559
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SRLP 731
++ T FG+RLLR W+ RPL + + ER AV L+ A++ K L
Sbjct: 560 WTMDRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVEELKEGEHTIAVDKVKFLLGKIKT 619
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAIL 789
D+E++L R++ + + + +D A + L G L+ +A S++ I
Sbjct: 620 DLEKVLIRIYYKKCSRPELLAALQILQDIASQYLSAKTPEQSGFSSILLSEAVSNVPKIY 679
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
E+ S L I + D + + D + +
Sbjct: 680 EDVNS-----------FLEKINAKAAKDDDKYGFFREEFEAE---------DINDLKLSI 719
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGF 907
+E L H K+ LG T + YVT+ YL+EV VP ++ S+ K
Sbjct: 720 ASVEDDLNTHRKDAAAKLGKTKVDYVTVAGIEYLIEVKRKSVEEKKVPASWQQISATKTT 779
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ TP +K++L E Q + +A + +RL+ + R V++ A L +L
Sbjct: 780 LRFHTPEVKRMLQERDQYKESLAAACDTAFKRLLDDIAAKYQSLRDCVSSLATLDALL 837
>gi|421076048|ref|ZP_15537050.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
gi|392525907|gb|EIW49031.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
Length = 864
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 204/458 (44%), Gaps = 89/458 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQ--PHCGFPERNF 387
+Q+ E KSKH ++++FF+MG FYE+F DA + ++EL++ G Q P CG P
Sbjct: 10 EQYLEIKSKHENEILFFRMGDFYEMFFTDAELASRELEITLTARDGGQRVPMCGIPYHAA 69
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ KL KGY+V + EQ E P+Q KG +VKRE+ ++T GT+ LL
Sbjct: 70 DTYIAKLISKGYKVAICEQVEDPKQ------AKG----IVKREVIKIITPGTIIAENLL- 118
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
PD +N + + D++T + + + L L L
Sbjct: 119 --PD-------NNNNYLAVLYEEEEELILAAADISTGECLWATFLGSQRLTALYDQLFRL 169
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
P E++ + + ++ L+ F I NRI
Sbjct: 170 MPTELVLASK------------------IENIEKLNTF------------ISNRI----- 194
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ--VLSALGGTLFYLKKSFLDETLL 625
S+ ++ D L + + + D Q L+A+G L+YL ++
Sbjct: 195 ----SHCTHTTLAIDNLKLVSDLPKQHFMMDDLPQQDVALAAIGCLLYYLHQT------- 243
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K +L + + Y+ +D+ ++ NLEV N R G TL L++ TA G
Sbjct: 244 --VKTDLSHINRLINYNAFEYLTIDSTSMRNLEVTRNVRDGGKKDTLLYVLDYTKTAMGG 301
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
RLL+ WL PL N+ I +RQD++A L + +P + + L+ + D+ER+L R+ +
Sbjct: 302 RLLKKWLEYPLMNTTHIIQRQDSIAEL--LEKPTLRQTIHETLANIYDLERILTRIEVGT 359
Query: 745 EANGRN-----SNKVVLYEDAAKKQLQE----FISALH 773
A+ R+ S+ VVL K+QLQ+ F+S LH
Sbjct: 360 -ASARDLIALKSSLVVL--PTIKEQLQKTNTIFLSNLH 394
>gi|402817014|ref|ZP_10866603.1| DNA mismatch repair protein MutS [Paenibacillus alvei DSM 29]
gi|402505120|gb|EJW15646.1| DNA mismatch repair protein MutS [Paenibacillus alvei DSM 29]
Length = 915
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 168/646 (26%), Positives = 264/646 (40%), Gaps = 143/646 (22%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ------PH 379
L+ +Q+ K + D +FF++G FYE+F DA + +KEL++ +G P
Sbjct: 4 LTPMMEQYLSIKEQVKDAFLFFRLGDFYEMFFDDAILASKELEITLTGRGSSGAEDRIPM 63
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + +++L KGY+V + EQ E P + VV+REI +VT GT
Sbjct: 64 CGVPYHSADNYIQRLIEKGYKVAICEQVEDP----------ATAKGVVRREIVRIVTPGT 113
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ--VMDDLDC 497
+ EG+LL + YL+ L++ + S A + D G +V A +GQ ++D+L+
Sbjct: 114 VMEGKLLDDKTN-HYLVCLSQGSTSNALAACDLSTGEMIVTSAP----IGQSWIIDELNV 168
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ P EII A +L E E PL++ W+ + E
Sbjct: 169 YM---------PTEIIGHAALLQ-EAE----------------PLTKSWNRSVLLTE--- 199
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
N+ D +A Q T L D Q L+ L G
Sbjct: 200 ---------WNRQDEALARQQFGEAVWTRLE----------DERQQALAILMG------- 233
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+L ET K L + Y+VLD NLE+ E R G+L L+
Sbjct: 234 -YLQET----QKRSLSQLTNIRTYDPDQYLVLDPFTRRNLELTETVRERAKKGSLLWLLD 288
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
T+ G RLLR W+ +PL N +I ER +AV L + + E R+ LS + D+ERL+
Sbjct: 289 RTETSMGARLLRRWIDKPLMNRNVIEERLEAVETLYH-HLIWREELREQLSSVYDLERLV 347
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
R+ A ANGR+ L S+L ++ Q C E T S L
Sbjct: 348 GRI-AFGTANGRD--------------LVALKSSLSQIPMLKQLC-------EQTSSATL 385
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEASL 856
+D D + + GG + YD +++E +
Sbjct: 386 -------------------LRDWIDSAIVDEPPVSVRDGGLIKPGYDEYLDQLREASVNG 426
Query: 857 TKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKKGFFRYW 911
+ + E +RK T I + IG + Y +EV +S S+P YE + + R+
Sbjct: 427 KRWIAELERKEKESTGIKSLKIGYNKVFGYYIEVTKSNLSSLPEGRYERKQTLANAERFV 486
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
TP +K EKE+ + +++G E ++ RQ + +
Sbjct: 487 TPELK-----------EKEALILEAEDKMLGLEYERFSELRQRIGS 521
>gi|345798537|ref|XP_536307.3| PREDICTED: DNA mismatch repair protein Msh3 [Canis lupus
familiaris]
Length = 1066
Score = 134 bits (336), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 142/616 (23%), Positives = 264/616 (42%), Gaps = 80/616 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 166 QYIELKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 225
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 226 RRLVAKGYKVGVVKQTETAA----LKAVGDNKSSLFSRKLTALYTKSTLIGEDVNPLVKL 281
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD--- 493
+ + S+L+ + E+ ++ + F GI V T ++ D
Sbjct: 282 DDAINVDEVMTDTSTSFLLCICENEENVKDKKKGNIFIGIVGVQPVTGEVVFDSFQDSAS 341
Query: 494 --DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+L+ +LC L+PVE++ P+ LS +TE + R T + +D + + +
Sbjct: 342 RSELETRILC-----LQPVEMLLPSR-LSEQTETLVHRATAASVRDDRIRVERM---DNV 392
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E + + +T E K ++ SQ+ GI+ + V+ +L
Sbjct: 393 YFEYSHAFQAVT-EFYAKDAVDIQASQS-------FSGII-------NLEKPVICSLAAV 437
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YLK+ L++ L + F+ G+M +M ++ L NLE+ +N + G+
Sbjct: 438 IRYLKEFNLEKVLSKPKNFKQFS----GEM---EFMTINGTTLRNLEILQNQTDMKTKGS 490
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LP
Sbjct: 491 LLWVLDHTKTSFGRRKLKKWVVQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLP 550
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG---CELMDQACSSLGAI 788
D+ER L ++ + + + +V K + Q I A++ +L+ + +
Sbjct: 551 DIERGLCSIY-HKKCSTQEFFLIVKTLYHLKSEFQALIPAVNSHVQSDLLRTFILEIPEL 609
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
L E H++ + I + FKD D+ P D +
Sbjct: 610 LSPVE----HYLRILNEQAAKIGDKTELFKDLTDF----------PLIKKRKD------E 649
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++E+ + HL+E RK+L + S+ YVT+ +++E+ S +P D+ S K
Sbjct: 650 IQEVTDKIQMHLQEIRKILKNPSLQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVS 709
Query: 909 RYWTPNIKKLLGELSQ 924
R+ +P I + L+Q
Sbjct: 710 RFHSPFIVENYRHLNQ 725
>gi|396478621|ref|XP_003840576.1| similar to DNA mismatch repair protein msh3 [Leptosphaeria maculans
JN3]
gi|312217148|emb|CBX97097.1| similar to DNA mismatch repair protein msh3 [Leptosphaeria maculans
JN3]
Length = 1139
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 158/669 (23%), Positives = 278/669 (41%), Gaps = 72/669 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ E K KH+D VI ++G Y+ F DA +KEL + + G E P
Sbjct: 229 LTPMEMQYLEIKRKHLDTVIVMEVGYKYKFFGEDARTASKELGIVCIPGKFRYDEHPSEA 288
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
FP ++V++L + ++V VV Q ET + +++ R++
Sbjct: 289 HLDRFASASFPTHRLQVHVKRLVQANHKVGVVRQIETAA----LKAAGNNRNAPFVRKLT 344
Query: 433 AVVTKGTLT---EG-ELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVVDVAT 483
+ TKGT EG E +A A YL+ +TE+N G+ V AT
Sbjct: 345 NLYTKGTYVDDVEGLETSTAGAGAGAQSTGYLLCITETNAKGWGSDEKVHVGLVAVQPAT 404
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
II D S + + + P E + + LS T++ +++H N S
Sbjct: 405 GDIIYDDFEDGFMRSEIETRMLHIAPAEFLVVGD-LSKATDK-LIQHLSASKTNVFGDRS 462
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVA-NSQAEGDGLTCLPGILSELISTGDSGS 602
E Y+ I+ K S+ +S+++ G IL ++ + +
Sbjct: 463 RVERVEKPKTMAAQAYSHISNFYAGKMKSSQGGDSESDQQG-----AILDKVHQLSEHVT 517
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LSA+ + YL L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 518 ICLSAM---ITYLTDYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQN 566
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFAL 721
+ + G+L+ ++ T FG+RLLR W+ RPL + + ER AV L+ G N
Sbjct: 567 ATDYTAKGSLFWTMDRTKTRFGQRLLRKWIGRPLIDKARLEERIAAVEELKEGENTIPVD 626
Query: 722 EFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LM 778
+ + L R+ D+E++L R++ + + +D + + L G + L+
Sbjct: 627 KLKFLLGRIKTDLEKVLIRIYYKKCSRPELLAALQTLQDLSSQYLSSKTPEKSGFKSILL 686
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV 838
+A S++ I E+ S L I + D + + +
Sbjct: 687 SEAVSNVPKIYEDVNSF-----------LDQINAKAAKEDDKYSFFREEHEAE------- 728
Query: 839 DMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE--SLRGSVPR 896
D + + +E L H K+ LG + I YVT+ YL+EV + VP
Sbjct: 729 --DINDFKLSIASVEDDLNSHKKDAGAKLGKSKIDYVTVAGIEYLIEVKRKSTEEKKVPA 786
Query: 897 DYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVA 956
++ S+ K R+ TP +K++L E Q + +A + RL+ + + R V+
Sbjct: 787 SWQQISATKSTLRFHTPEVKRMLQERDQYKESLAAACDAAFIRLLEAISSKYQQLRDCVS 846
Query: 957 ATAGLTLIL 965
+ A L +L
Sbjct: 847 SLATLDALL 855
>gi|405960067|gb|EKC26017.1| DNA mismatch repair protein Msh3 [Crassostrea gigas]
Length = 1104
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 162/650 (24%), Positives = 277/650 (42%), Gaps = 93/650 (14%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH----CGFPERN 386
++Q+ E K K+ D ++F + G Y F DA A L + Q H P
Sbjct: 217 EQQYIELKEKYPDTLLFVECGYKYRFFGEDAENAAHVLKIY---CHQDHNFMTASIPVHR 273
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL------ 440
++V +L GY+V VV+Q ET + G R++ A+ TK TL
Sbjct: 274 LFVHVRRLVAAGYKVGVVKQMETAALKACGDNKSGP----FTRQLTAMYTKSTLFVNFSE 329
Query: 441 -TEGEL-LSANPDASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDLDC 497
+GE+ + + + YLM + + P + + GI V +T +I D
Sbjct: 330 ELQGEINVEESCSSEYLMCVYDV---PCDRDVKHQTIGILAVQPSTGDVIYDSFEDSDLR 386
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETER-----AILRHTRNPLVNDLVPLSEFWDAETTV 552
S L + ++PVE++ + LS T++ A +R T + + EF D E V
Sbjct: 387 SQLETRILHIQPVELL-SSKTLSDATQKLLSDIATMRSTDDDRLR-----QEFCDDE--V 438
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E ++ + R+ S+ + P +L +I+ + V+S L L
Sbjct: 439 FEFRSAFTRV---------SDFYKKHGKD------PSVLQLVINLPYA---VISCLAAVL 480
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
YL+ L + L + F S F + +K Y+ L + NLE+F N G ++
Sbjct: 481 NYLENFGLQKALQDTSNF-----SQFSEKSK--YLCLPGNTVRNLELFSNQNDGKEKNSV 533
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV-AGLRGVNQPFALEFRKALSRLP 731
Y +N VT +G R L+ WLA PL ++ I +RQ+AV L +N + R L + P
Sbjct: 534 YWLMNQTVTKYGSRKLKAWLACPLKDNKEILQRQEAVNTILDNLNCSVLTKLRSVLGKSP 593
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER L ++ K +QE C + A + A+ +
Sbjct: 594 DLERGLCSIYHE------------------KCSVQELYVV---CRSLSAALCEVEAMKKW 632
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFD--WVEANNSGRIIPHGGVDMDYDSACKKV 849
+L+ +P ++S +K FK+A + V+AN+ I + D ++
Sbjct: 633 LTENSCSLLLSLFNEIPDLLSDVKQFKEALNEAAVKANDKTNIFTNEDDFPDIRKRKNQI 692
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ + + H +E R L S+ YVT+ YL+EV + VP+D+ +S K R
Sbjct: 693 ETVRREIVDHRREVRIALRQPSLDYVTVMGVEYLIEVKNAHMNLVPKDWFKINSTKAVGR 752
Query: 910 YWTPNIKKLLGELSQAESE----KESALKSILQRLIGQFCEHHNKWRQMV 955
+ +P I+ + ELSQ + + ++A S LQ QF + ++++ V
Sbjct: 753 FHSPFIQDKVKELSQLQEQLVLDSQAAWLSFLQ----QFNDGFRRYKKAV 798
>gi|20807804|ref|NP_622975.1| DNA mismatch repair protein MutS [Thermoanaerobacter tengcongensis
MB4]
gi|44888228|sp|Q8RA71.1|MUTS_THETN RecName: Full=DNA mismatch repair protein MutS
gi|20516362|gb|AAM24579.1| MutS-like ATPases involved in mismatch repair, family 2
[Thermoanaerobacter tengcongensis MB4]
Length = 869
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 155/599 (25%), Positives = 257/599 (42%), Gaps = 107/599 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 11 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 71 AADFYIDKLVKKGYKVAICEQLEDPS------KAKG----LVKRDVVRIYTPGTIINPES 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + +GIC VDV T + ++ + + + ++
Sbjct: 121 MDEKSN-NYLVSVYREKDN---------YGICAVDVTTGELYATEIKNCKNGKRIYDEIA 170
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII L + ++ N VN PL+ ++A + ++E
Sbjct: 171 KYSPSEIISNEEFLKNNKYIKVFKNN-NCAVNAYKPLN--YEASSELIE----------- 216
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ D V + E V+ +LG L YLK+ L +T L
Sbjct: 217 --KQFDKKVEELELEDKKF-------------------VIHSLGALLSYLKE--LQKTSL 253
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ + + + D YM LD+ A+ NLE+ E++R+ G+L L+ VT G
Sbjct: 254 K----HINKLTLYQD---NSYMGLDSNAIRNLEILESNRNKSKKGSLLGVLDRTVTPMGG 306
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL + I +R DAV L N +E ++ L+++ D+ERL ++
Sbjct: 307 RLLKKWLEEPLIDKDEIEKRLDAVEELFN-NYRERIELKELLNKVYDLERLASK------ 359
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + IL SR L I
Sbjct: 360 ---------IVYQSVTPK---DFIS----IKLSLQNLPKIKNILSKFSSRLLKEIYEKLD 403
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDM--DYDSACKKVKEIEASLTKHLKE 862
L + ++ K KD D G II G +M A + K A+L +E
Sbjct: 404 VLQDVYELIDKSIKD--DPSNQLKEGNIIKDGYNEMVDKLRKASTEGKNWIANLEADERE 461
Query: 863 QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+ T I + IG + Y +EV +S VP Y + + RY TP +K++
Sbjct: 462 K------TGIKNLRIGYNKVFGYYIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEI 514
>gi|358391487|gb|EHK40891.1| hypothetical protein TRIATDRAFT_78319 [Trichoderma atroviride IMI
206040]
Length = 1099
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 150/665 (22%), Positives = 282/665 (42%), Gaps = 74/665 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ E K KHMD ++ ++G + F DA V AKEL + + G E P
Sbjct: 197 LTPMELQFLEIKRKHMDTILIVEVGYKFRFFGEDARVAAKELSIVCIPGKMRYDEHPSEA 256
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++ ++L G++V VV Q ET +K +++ R++
Sbjct: 257 HLDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLT 312
Query: 433 AVVTKGTLTE--GELLSAN---PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
V TKGT + GEL S + P YL+ +TE+ + + GI V AT II
Sbjct: 313 NVYTKGTYIDENGELDSQDASAPSGGYLLCITETATKGSGADENVNVGILAVQPATGDII 372
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR--HTRNPLVNDLVPLSEF 545
D S + L + P E + + L+ T++ IL + + D +
Sbjct: 373 YDTFEDGFMRSEIETRLLHISPCEFVIVGD-LTKGTDKLILHLSGSSTNVFGDRSRVERV 431
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
++T E + + A+ + +A N S +L +++ ++ + L
Sbjct: 432 PKSKTMAAEAYSHVTQFYADKVKEASDNETAS-----------ALLDKVLKLPEAVTICL 480
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+ + +L++ L E + K+ F + + +M+++ LE+LE++ NS
Sbjct: 481 SAM---ITHLQEYGL-EHIFGLTKY-------FQSFSTRSHMLVNGTTLESLEIYRNSTD 529
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G+L+ ++ +T FG+RLLR W+ RPL + + ER AV L ++
Sbjct: 530 HSHRGSLFWAVDKTLTRFGQRLLRKWVGRPLLDRERLEERLAAVQELLD---------KQ 580
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
+ S + D+ERLL ++++A+ S + Y + +L +S L + + SS+
Sbjct: 581 STSPVDDLERLL----STTKADLERSLIRIYYGKCTRPEL---LSVLQTLQKIASHYSSI 633
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
+ + + L I+ LP I+ + + D + A + +G ++ +
Sbjct: 634 KSPSDVAFNSPL--IVNAIVALPKILDTVISYLDRINMYAAKKDDK---YGFFREEFHTE 688
Query: 846 CKK-----VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYEL 900
+ + +E L +H + + + YVT+ YL+ VP +VP +
Sbjct: 689 EIQDHQMGIAHVEHELDEHRAVAAQKIKQKMVEYVTVAGIEYLIAVPNKDIKNVPASWSK 748
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG 960
S K R+ TP + +L+ E Q+ +A + + + + R ++A A
Sbjct: 749 ISGTKALSRFHTPEVIRLITERDQSREALAAACDKAFKDFLAEIAAEYQPLRDAISALAT 808
Query: 961 LTLIL 965
L +L
Sbjct: 809 LDCLL 813
>gi|435853699|ref|YP_007315018.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM
5150]
gi|433670110|gb|AGB40925.1| DNA mismatch repair protein MutS [Halobacteroides halobius DSM
5150]
Length = 878
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 163/614 (26%), Positives = 256/614 (41%), Gaps = 122/614 (19%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KG---EQ 377
+ +L+ +Q++ K + ++++FF++G FYE+F DA + A+EL+L KG E
Sbjct: 1 MSDLTPLMQQYFSIKDNYQEEILFFRLGDFYEMFAKDAQIAARELELTLTARNKGSGEET 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P ++ + +L GY+V + EQ E P+ + +VKRE+ VVT
Sbjct: 61 PMAGVPCKSAESYIAQLIEMGYKVAICEQVEDPK----------ATSGLVKREVVRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ +LL + D +YL A+ NQ FG VVDV+T + Q+
Sbjct: 111 GTVVNNDLLE-DKDNNYLAAII-GNQD--------GFGFAVVDVSTGEFVTTQLDGPTQI 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ + LS + P EI+ + E + + NP+ LS+ + TT K
Sbjct: 161 NKVIDELSRINPAEILLDNKVEETEEIIEFIDNQLNPI------LSKTKEGFTT----KE 210
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y +T + +V N EG G LP + A G L
Sbjct: 211 AYRLLTDQF------DVVN--LEGFGCEELP--------------LAIQAAGAIL----- 243
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
FL ET K L + + YMVLDA NLE+ + R G+L L+
Sbjct: 244 DFLVET----QKRSLNHINQLATYSTTDYMVLDANTRRNLELTQTMRDKSKRGSLLWVLD 299
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERL 736
VTA G R L+ W+ +PL I R DAV + FA E ++ L+ + D+ERL
Sbjct: 300 QTVTAMGGRKLKKWVEQPLLELDRIEYRLDAVEEI--TKNIFAKEELKELLTEVYDIERL 357
Query: 737 LARLFASSEANGRN------------SNKVVL--YEDAAKKQLQEFISALHGCELMDQAC 782
L ++ S AN R+ K VL ++ K+LQ+ + L D AC
Sbjct: 358 LGKIIYGS-ANARDLISLKSSLHILPEVKEVLDQFKTPKLKKLQDNLDKLE-----DVAC 411
Query: 783 SSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
++EN+ LT G SI+K G D
Sbjct: 412 -----LIENSIKEDPPTTLTEG-------SIIKK--------------------GYDNQL 439
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
D + ++ + + K++R+ G +S+ Y +EV ++ +VP DY +
Sbjct: 440 DELLEAMENGKQWIIDLQKQERERTGISSLKVGHNKVHGYYIEVTKANLDAVPEDYVRKQ 499
Query: 903 SKKGFFRYWTPNIK 916
+ RY TP +K
Sbjct: 500 TLSNSERYITPELK 513
>gi|302389749|ref|YP_003825570.1| DNA mismatch repair protein MutS [Thermosediminibacter oceani DSM
16646]
gi|302200377|gb|ADL07947.1| DNA mismatch repair protein MutS [Thermosediminibacter oceani DSM
16646]
Length = 863
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/425 (28%), Positives = 182/425 (42%), Gaps = 72/425 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM----KGEQPHCGFPERNF 387
KQ+ E K K+ D ++FF++G FYE+F DAH+ A+EL++ + P G P
Sbjct: 7 KQYREIKEKYKDYIVFFRLGDFYEMFFDDAHIAARELEIALTSRDPENRVPMAGVPYHAA 66
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ KL KGY+V++ EQ E P+Q KG +VKRE+ ++T GT+TE L
Sbjct: 67 DQYIYKLISKGYKVVICEQVEDPKQ------AKG----IVKREVVKIITPGTITEISALE 116
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
+ +YL+ + N FGI D+ T + ++ L LS+L
Sbjct: 117 EKKN-NYLVCIYRENND---------FGIAATDLMTGEFLTTEIHCAYPYQELLDELSKL 166
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE--FWDAETTVLEIKNIYNRITAE 565
P E + A L + L N N L+ E ++ AE+
Sbjct: 167 EPRECLVNAGFL----QDTFLNKAVNTNFNILLTFKENDYFQAESA-------------- 208
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ SQ G+ L I +T SG+ L YL+++
Sbjct: 209 ------RELLMSQFSGNE---LEDIFKRPFATIASGA--------CLNYLRET------- 244
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ L + + YM LD NLE+ ++ G G+L L+ VT+ G
Sbjct: 245 --QRLSLSHINSIRYYERTEYMALDVTCRRNLELTQSLMDGKKQGSLLWVLDKTVTSMGG 302
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
R LR W+ +PL + I+ERQDAV L N E R+ L L D+ERL +L +
Sbjct: 303 RTLRKWIEQPLIDIIKIKERQDAVEELYQ-NYFLRQELREQLKNLYDLERLTGKLVCGN- 360
Query: 746 ANGRN 750
N R+
Sbjct: 361 LNARD 365
>gi|304440469|ref|ZP_07400358.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371221|gb|EFM24838.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 864
Score = 133 bits (335), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 156/641 (24%), Positives = 275/641 (42%), Gaps = 120/641 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
L ++ +Q+ E K + D ++F+++G FYE+F DA +KELDL + +
Sbjct: 6 LEKVTPMMRQYLETKKNYEDAILFYRLGDFYEMFFDDAITASKELDLALTGRGGGLDDKI 65
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P F + KL KGY+V + +Q E P + KG +VKRE+ VVT
Sbjct: 66 PMCGIPHHVFKNYLSKLIDKGYKVAICDQVEDP------KLAKG----IVKREVTKVVTP 115
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT T+ + + A + +++ +L + S + D G+ ++TS++ L + D
Sbjct: 116 GTFTDTDYIEAGSN-NFMTSLYVRDNSVSITYVDYSTGML---LSTSKVFLNEGSRD--- 168
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ ++S++ P E++ ++ + ER + +N E + EIKN
Sbjct: 169 EYIDLIVSKISPKEVV-----INSDAERYFDKSVLKNYIN-----------EKNIEEIKN 212
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
E L S + + EL+++ + L L L + K
Sbjct: 213 ------KEYLKHLSSELKD----------------ELLNSKYRENISLEILLNYLSNVSK 250
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ L+ + D+ + M+LD ++ NLE+ + S SG+L L+
Sbjct: 251 TKLNHIV------------KIADINLEQKMILDENSMRNLEILKGLNSNRKSGSLLEVLD 298
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+ T+ G+RLLR W+ PL N I++RQD V + F L + R LS + DMER
Sbjct: 299 YTKTSMGQRLLRRWIEEPLLNVDEIKKRQDYVEEFKS---DFILLDDVRSILSSIIDMER 355
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+ ++ + +E N N + + + E S L G +L I + E +
Sbjct: 356 QMVKI-SDNEINPNEFNAL----KGSLASVMELKSYLEGSNF-----KNLNEI--SYELK 403
Query: 796 QLHHILTPGKGL-----PAIVSILKHFKDAFDWVEANNSGRIIPHGG---VDMDYDSACK 847
L++I+ + P +K KD ++ E + R+ G +D++
Sbjct: 404 PLYNIIEEIDSMIVEDAPVKTVDVKFIKDGYNE-ELDELFRLSKDGKKFLIDLE------ 456
Query: 848 KVKEIEASLTKHLK-EQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
KE E + K+LK + K+LG Y +EV +S VP Y + + G
Sbjct: 457 -AKEKEETGIKNLKIKYNKILG-------------YFIEVTKSALDMVPERYIRKQTLVG 502
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
R++T +K++ ++ A E S + LI F ++
Sbjct: 503 SERFFTIELKEMESKILNAHDEANSLQLKLYDNLIENFKKY 543
>gi|58264676|ref|XP_569494.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|338818295|sp|P0CO92.1|MSH3_CRYNJ RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|57225726|gb|AAW42187.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1191
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 164/658 (24%), Positives = 270/658 (41%), Gaps = 113/658 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ+ E K ++ D ++ ++G Y+ DA ++EL + FP RNF
Sbjct: 243 EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPNRNFFTA 293
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
++V+KL GY+V V+ QTET +K +++ R++ + T T
Sbjct: 294 SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFARKLTHLFTAATY 349
Query: 441 TEGELL-------------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
E L +A P + L+A+ E AS + +CVV
Sbjct: 350 VEDPSLSSSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVP- 408
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL-------RHTRNP 534
T I + D + L L+ L P E++ P LS TE+ + RN
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLSKATEKVLTYFAGEPKHRGRNA 468
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYN-RITAESLNKADSN-VANSQAEGDGLTCLPGILS 592
+ + + +DA L N Y+ + +++K D N + EG+ L LS
Sbjct: 469 VRIERIDNIPEYDAAFDFL--TNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLS 526
Query: 593 E-----------LISTGDSGS-----------QVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ +++G S S QV+ ++ + Y+K+ L+
Sbjct: 527 QDGADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKH---- 582
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
S F A + +M+L + L NLE+++N G G+L L+HC T GKRLLR
Sbjct: 583 ----TSSFVRFANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLRE 638
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RPL + ++ R DA+ + N + R L +PD+ R L R
Sbjct: 639 WVGRPLLDVAALKARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR----------- 687
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
V Y A +L + L L + ++G + S L++I LP I
Sbjct: 688 ----VQYGKATPNELATLLITL--VRLASEFKPNMGNVF---RSCLLNNI---PNTLPTI 735
Query: 811 VSILKHFKDAFDWVEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
+ + F +A + +A N+ + P D+ C V E+E L +HL E RK+
Sbjct: 736 LDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKI 793
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
L ++ Y+T+ YL+EVP VP + S+ + RY TP I + E +Q
Sbjct: 794 LKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKERTQ 851
>gi|300794684|ref|NP_001178886.1| DNA mismatch repair protein Msh3 [Rattus norvegicus]
Length = 1105
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 158/661 (23%), Positives = 276/661 (41%), Gaps = 88/661 (13%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDVKQLHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + FGI V AT ++ D
Sbjct: 308 LDDSVNIDEAVTDTSTNYLLCIYEEKENIKDKKKGNISFGIVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS-------EFWDA 548
L + L+PVE++ P+ + P TE I R T + +D + + E+ A
Sbjct: 368 SRLELETRTASLQPVELLLPSQLSEP-TEMLIRRATAVSVGDDRIRVERMNNTHFEYSHA 426
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
TV+E Y R T ++ G L G++ V+ AL
Sbjct: 427 FQTVMEF---YARETVDT---------------QGSQSLSGVI-------HLEKPVICAL 461
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ YLK+ LD+ L + F+ L SG +M ++ L NLE+ +N +
Sbjct: 462 AAIIRYLKEFNLDKVLSKPENFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKT 514
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
G+L L+H T+FG+R L+ W+ +PL I R DA++ + + L
Sbjct: 515 RGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESSVFEQIENLLR 574
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGA 787
+LPD+ER L ++ K QEF + C+L + + + A
Sbjct: 575 KLPDVERGLCSIYHK------------------KCSTQEFFLIVKNLCQLKSELQALMPA 616
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ + +S L + +P ++S ++ + + A + + D+ K
Sbjct: 617 VNSHVQSDLLRARVLE---VPELLSPVEPYLKVLNEQAAKAGDKTELFKDLS-DFPLIKK 672
Query: 848 K---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ ++E+ S+ HL+E RK+L S+ YVT+ +++E+ S VP D+ S
Sbjct: 673 RKNEIQEVIHSIQMHLQELRKILKLPSLQYVTVSGQEFMVEIKNSAVSCVPTDWVKVGST 732
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K R+ +P + + L+Q + + + F EH++ + V A + I
Sbjct: 733 KAVSRFHSPFVVENYRRLNQLREQLVLDCNAEWLDFLENFGEHYHTLCKAVDHLATVDCI 792
Query: 965 L 965
Sbjct: 793 F 793
>gi|296132996|ref|YP_003640243.1| DNA mismatch repair protein MutS [Thermincola potens JR]
gi|296031574|gb|ADG82342.1| DNA mismatch repair protein MutS [Thermincola potens JR]
Length = 882
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 167/628 (26%), Positives = 264/628 (42%), Gaps = 122/628 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ E KS++ D ++FF++G FYE+F DA +KEL++ + P CG P
Sbjct: 9 QQYLEIKSQYPDAILFFRLGDFYEMFFEDAEKASKELEITLTARDGGNDKKVPMCGVPFH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL KGY V + EQ E P G+ +VKRE+ V+T GT+ E +
Sbjct: 69 AATTYIAKLINKGYNVAICEQVEDP----------GAAKGIVKREVIRVITPGTVLEENM 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + ++L+A+ + D +G+ V DV+T + ++ + L +S
Sbjct: 119 LDEKQN-NFLIAVNKD---------DFGYGLAVADVSTGYFAVTELRGAKALNQLIDEIS 168
Query: 506 ELRPVEIIKPANML-SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
L+PVE + P N++ + + IL+ + L + IKN
Sbjct: 169 RLQPVECLIPDNLVKNMDLTTEILKQVKLSL----------HSYSSVHFSIKN------- 211
Query: 565 ESLNKADSNVANSQAEG--DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
A S + A G +G CL +S G S + L A FL E
Sbjct: 212 -----ATSTLLRHFATGSLEGFGCLE------MSVGISCAGALMA-----------FLAE 249
Query: 623 TLLRFAKF--ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
T K +L+P + YM+LD NLE+ R GTL L++
Sbjct: 250 TQKNSLKHINKLIPYT------TTSYMLLDPSTRRNLELTRTIRDSSRKGTLLWVLDYTQ 303
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
TA G RLL+TWL +PL + I R D V L VN F + +K + + D+ERL R
Sbjct: 304 TAMGGRLLKTWLEQPLTDITAIETRLDTVEEL--VNNVFMRGDLQKLFTEVYDLERLAGR 361
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ A AN R+ A KK L Q + ILE S L
Sbjct: 362 I-AFGSANARDLI-------ALKKSL--------------QVLPKVKEILEKAYSPGLIQ 399
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD---SACKKVKEIEASL 856
+ L + S+++ D + + G I G + + D A + K A L
Sbjct: 400 LYRQLDILEDVASLIESAIDDNPPITLRDGG--IIKKGYNEEIDRLRKASRDGKTWIAEL 457
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ KE+ T I + +G + Y +EV + +VP DY + + R+ TP
Sbjct: 458 ERREKER------TGIKSLKVGYNKVFGYYIEVTRANLDAVPDDYIRKQTLANAERFITP 511
Query: 914 NIKK----LLG---ELSQAESEKESALK 934
++K+ +LG +++Q E E A++
Sbjct: 512 DLKEYESLILGAEEKITQLEYELFQAVR 539
>gi|298676066|ref|YP_003727816.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum
Z-7303]
gi|298289054|gb|ADI75020.1| DNA mismatch repair protein MutS [Methanohalobium evestigatum
Z-7303]
Length = 887
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 165/649 (25%), Positives = 268/649 (41%), Gaps = 112/649 (17%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGF 382
+Q++E K K+ D ++FF+MG FYE F+ DA ++EL++ KGE+ P G
Sbjct: 7 AMQQYYEMKKKYSDALLFFRMGDFYECFDEDAKTVSEELEITLTNRNGNKKGEKRPLAGI 66
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
P + +L +KGY+V + EQ E P + + K VVT GT +
Sbjct: 67 PYHAVDNYLPRLIKKGYKVAICEQLEDPREAKGVVKRGVV----------RVVTPGTAID 116
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ + + +YLMA++E N FG+ +DV+T + Q+ D+ +
Sbjct: 117 STMFTDAAN-NYLMAISEKNNE---------FGLSFLDVSTGEFLTTQLSDEPPYDRIAS 166
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF----WDAETTVLEIKNI 558
++ +RP E I P + + +L+ + + L E+ ++ T L++
Sbjct: 167 EIARMRPAECILPPYLYNNSEIAQLLKDMK-------ITLHEYDSSAFETNTARLQLLQH 219
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+N T + G+ C D + +SA G TL Y
Sbjct: 220 FNVSTLK-----------------GMGC------------DDLTLAISASGATLQYTL-- 248
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
ET +R EL + +MVLD+ L NLEV ++ R + T+ L+
Sbjct: 249 ---ETQMR----ELGHVHTLKSYSDSDFMVLDSITLRNLEVIKSVRGEGNDATILKVLDD 301
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
T G RLL+ WL +PL + I R DAV L+ + R LS + D+ERL+
Sbjct: 302 TKTPMGGRLLQKWLVKPLISIDKINRRLDAVQNLKE-ETLVRFDLRSYLSYVKDVERLIG 360
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQ---EFISALHGCELMDQACSSLGAILENTESR 795
R+ NSN L A KK L+ + I L C+ D IL +
Sbjct: 361 RIVYG------NSNARDLV--ALKKSLEVVPDIIGCLKECDQSD--------IL-----K 399
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEA 854
++H+ L+ L I +++ G I P ++D + KE A
Sbjct: 400 EIHNELSSFTELGDITELIEKGITDEPPATVREGGLIKPGYSEELDELKDMSRHSKEWIA 459
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
S K +E+ T I + +G + Y +EV + VP DY + + R++
Sbjct: 460 SFQKQERER------TGINSLKVGYNKVFGYYIEVTKPNIKYVPDDYIRKQTMANAERFY 513
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG 960
TP +K+ + A+ EK +L+ L I H+K Q A G
Sbjct: 514 TPELKERENMIISAD-EKIVSLEYNLFTDINSKVASHSKNLQRTATLIG 561
>gi|387849|gb|AAB60711.1| MutS homologue; major mRNA product contains exon 1a and exon 9b;
alternative protein produced from exon 1b and exon 9b
[Mus musculus]
Length = 1091
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 152/654 (23%), Positives = 273/654 (41%), Gaps = 77/654 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + G+ V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSEP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIV------ELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 676
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 677 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 736
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
P I + L+Q + + + F EH++ + V A + I
Sbjct: 737 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIF 790
>gi|302391923|ref|YP_003827743.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM
5501]
gi|302204000|gb|ADL12678.1| DNA mismatch repair protein MutS [Acetohalobium arabaticum DSM
5501]
Length = 893
Score = 133 bits (334), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 176/689 (25%), Positives = 282/689 (40%), Gaps = 137/689 (19%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KGEQ-P 378
+ L+ +Q++ K ++ D ++ F++G FYE+F DA + A+EL+L KG++ P
Sbjct: 3 KELTPMMQQYFSIKDEYDDAILLFRLGDFYEMFADDAELAARELELTLTSRNKGKGKKTP 62
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
G P + + L KGYRV + EQ E P + + +VKRE+ V+T G
Sbjct: 63 MAGIPYHSAESYIATLIDKGYRVAICEQVEDPSE----------TNGLVKREVVRVITPG 112
Query: 439 TLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
T+ + E+L + + +YL A+ + + FGI +D++T ++ + S
Sbjct: 113 TVIDNEMLD-DKNNNYLSAVV---------ANEEGFGIATIDISTGDFSTTELTGEEAQS 162
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L L+ + P E + N+ + +P++N EIK
Sbjct: 163 NLIDELARINPAECLVDTNLYEKTEVITYINQQLDPIIN----------------EIKER 206
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+N A L D NS DG C + ++A G L
Sbjct: 207 FNYSQAYDL-LIDHFEVNSL---DGFGC------------EDLKFAVTAAGAVL-----D 245
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
FL ET K L + + K YM LDA NLE+ + R G+L L+
Sbjct: 246 FLIET----QKRTLGHLNQLTTYSTKDYMTLDANTRRNLELTKTIRDQSYKGSLLWVLDQ 301
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
VTA G R L+ WL +PL + I R DAV L+ N E + L+ + D+ERL++
Sbjct: 302 TVTAMGGRKLQKWLEQPLLDVEGINNRLDAVGELKD-NIFLKEELKDNLTEVYDLERLMS 360
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC-ELMDQACSSLGAILENTESRQL 797
++ S AN R+ L+ I+ L EL+ Q SS
Sbjct: 361 KITYGS-ANARDL-----------IALKTSIANLPAIKELLTQFESS------------- 395
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEAN---------NSGRIIPHGGVDMDYD---SA 845
L + L +D + +E++ G II G D + D A
Sbjct: 396 --------KLKSAADKLDTLEDVHELIESSIKEEPPTTVTEGDIIK-TGYDEELDEFRQA 446
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRS 902
+ K+ A+L K KE+ T I + +G + Y +EV ++ VP +YE +
Sbjct: 447 MNEGKDWIANLEKEEKER------TGIKSLKVGFNKVHGYYIEVTKANLDLVPDNYERKQ 500
Query: 903 SKKGFFRYWTPNIK----KLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
+ RY TP +K K+LG + E E L + ++ + Q E K +VA
Sbjct: 501 TLSNSERYITPELKEKESKILGA-EEKSVELEYQLFTEIREKVAQETERVQKVADIVAQ- 558
Query: 959 AGLTLILLDGSLLHAFLILQSNSCSSEMN 987
LD A + + +N C E+N
Sbjct: 559 -------LDVLASLAEVAINNNYCHPEVN 580
>gi|303232158|ref|ZP_07318861.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-049-V-Sch6]
gi|302513264|gb|EFL55303.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-049-V-Sch6]
Length = 873
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 187/417 (44%), Gaps = 78/417 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ + KS+H D+++FF++G FYELF DA + ++EL++ + P CG P
Sbjct: 10 EQYLDIKSRHSDELLFFRLGDFYELFNEDALIASRELNITLTGRPTGNEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIQVITPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N + + E+ + + DV+T +I +V D + S +
Sbjct: 120 NDARSNNFLALFYLVKEA------------WILVFSDVSTGEVIWDRVPQD-NISQIYDS 166
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P++ + + N +V L P + F
Sbjct: 167 LSMYRPAEIIIPKGTILPQSIVDFIHNQFNNVV--LSPFTSF------------------ 206
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
ES++ A +AN+ + GL VL+ALG L YL+
Sbjct: 207 -ESVDFA-CKLANNHFQDMGLM---------------EEDVLAALGFMLLYLQDVI---- 245
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + M ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 246 -----KTEIAHINYVHQMDVGNRLILDTSSLRHLEITHNLRDGGVKGTLLDVLDRTLTPM 300
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AVA L N E + L + D ER++ R+
Sbjct: 301 GARLLKQWLESPLTDISTIQRRQAAVAELISRNGE-RCEIQSYLDCIYDFERIVGRI 356
>gi|410948910|ref|XP_003981170.1| PREDICTED: DNA mismatch repair protein Msh3 [Felis catus]
Length = 1126
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 148/657 (22%), Positives = 280/657 (42%), Gaps = 80/657 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K + D ++ + G Y F DA V A+EL++ ++ P ++V
Sbjct: 226 QYIELKQQQKDAILCVECGYKYRFFGEDAEVAARELNIYCHLDHNFMTASIPTHRLFVHV 285
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + +K + R++ A+ TK TL ++
Sbjct: 286 RRLVAKGYKVGVVKQTETAA----LKAIGDNKSSLFSRKLTALYTKSTLIGEDVNPLVKL 341
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMD--- 493
+ + ++L+ + E ++ + F G+ V AT ++ D
Sbjct: 342 DDAINVDEIVTDNSTNFLLCICEDQENVKDKKKGNIFIGMVGVQPATGEVVFDSFQDSAS 401
Query: 494 --DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+L+ +LC L+PVE++ P++ LS +TE I R T + +D + + +
Sbjct: 402 RLELETRILC-----LQPVELLLPSH-LSEQTEMLIHRATAARVRDDRIRVERM---DNM 452
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E + + +T E K ++ SQ+ GI+ + V+ +L
Sbjct: 453 YFEYSHAFQAVT-EFYAKDVVDIQGSQS-------FSGII-------NLEKTVICSLAAI 497
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YLK+ L++ L + F+ L G+M +M ++ L NLE+ +N + G+
Sbjct: 498 IRYLKEFNLEKVLSKPKNFKQLS----GEME---FMTINGTTLRNLEIIQNQTDMKTKGS 550
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+H T+FGKR L+ W+ +PL I R DAV+ + + L +LP
Sbjct: 551 LLWVLDHTKTSFGKRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLP 610
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ER L ++ ++ + ++ + L+ + QA + A+ +
Sbjct: 611 DIERGLCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAL--IPAVNSH 653
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--- 848
S L + +P ++S ++ F + +A SG D+ K+
Sbjct: 654 VRSDLLQTFILE---IPELLSPVERFLKLLNE-QAAKSGDKTELFKDLSDFPLIKKRKDE 709
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
++E+ + HL++ RK+L + S YVT+ +++E+ S +P D+ S K
Sbjct: 710 IQEVTHRIQIHLQDIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVS 769
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ +P I + L+Q + + + F EH++ + V A + I
Sbjct: 770 RFHSPFIVENYRRLNQLREQLVLDCSAEWLDFLEDFSEHYHSLCKAVHHLATVDCIF 826
>gi|334340541|ref|YP_004545521.1| DNA mismatch repair protein MutS [Desulfotomaculum ruminis DSM
2154]
gi|334091895|gb|AEG60235.1| DNA mismatch repair protein MutS [Desulfotomaculum ruminis DSM
2154]
Length = 869
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 159/610 (26%), Positives = 259/610 (42%), Gaps = 120/610 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
L+ +Q+ E K ++ D ++FF++G FYE+F DA + ++EL++ + P C
Sbjct: 3 LTPMMEQYLEIKEQYADAILFFRLGDFYEMFFEDAKLASRELEITLTGRDAGQPEKVPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY+V + EQ E P K SK +VKRE+ VVT GT+
Sbjct: 63 GVPFHAADNYIHKLIEKGYKVAICEQVEDP---------KASKG-LVKREVIRVVTPGTV 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+G L+ + + +YL+A+ + P + G+ + D++T + Q+ VL
Sbjct: 113 MDGSSLN-DKENNYLVAIY---RYPGN-----IIGLALTDLSTGLFQVTQLEGQYAPDVL 163
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL-SEFWDAETTVLEIKNIY 559
L L P EI+ P + +S L+ +V PL S + E + +K +
Sbjct: 164 KDELERLAPREIVVPEDQISTGLR---LQEAAGLVVT---PLESRAFGPEAAIPTLKQHF 217
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++ +A+ V + A G+L
Sbjct: 218 GPKVSDDFLQANPAVTGAAA---------GLL---------------------------- 240
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
E L+R + +L + +MVLD A NLE+ + R G+ G+L L+
Sbjct: 241 --EYLIRTQRRKLNHITSISRYTPGSFMVLDGVARRNLEISRDIRDGEKKGSLLGVLDAT 298
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLA 738
TA G R+LR WL +PL + I +R DAVA L V+ E ++L + D+ERL A
Sbjct: 299 KTAMGGRMLRRWLEQPLIDINRINDRLDAVAEL--VHSALLRDELTQSLKHIYDLERLTA 356
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
+ A ANGR+ ++ A+ ++L AL C+ CS L I + +
Sbjct: 357 KA-AYGSANGRDMLALL----ASLEKLPLLRQALKDCQ-----CSLLRKIYDRFDC---- 402
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-------DMD-YDSACKKVK 850
L K+ + A N + GG+ ++D SA + K
Sbjct: 403 ---------------LTDLKELLNVALAENPPVSLREGGLIKTGFHPEVDQLRSAARDGK 447
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
ASL +E+ TSI + +G + Y LEV + VP Y+ R +
Sbjct: 448 NWLASLEAREREK------TSIKSLKVGFNKVFGYYLEVTRANLNLVPDYYQRRQTLANA 501
Query: 908 FRYWTPNIKK 917
R+ TP++K+
Sbjct: 502 ERFITPDLKE 511
>gi|221505747|gb|EEE31392.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG]
Length = 1682
Score = 132 bits (333), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 18/175 (10%)
Query: 300 RDAKRRRPGDVY--YDPRTLYLP-PD--FLR-----NLSEGQKQWWEFKSKHMDKVIFFK 349
RD RR D YD +L++P PD R +++ G Q+WE K +H DK+I FK
Sbjct: 517 RDISGRRAIDCGEDYDFSSLWIPSPDSQLARAHARPHMTPGMAQYWEIKKEHFDKLILFK 576
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKG----EQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+GKFYEL DA + LDL++M G +PHCGFPE+N +L + GY+V+VVE
Sbjct: 577 IGKFYELVYGDACAAHRILDLKWMGGGGADAKPHCGFPEQNLHFQARQLVQAGYKVVVVE 636
Query: 406 QTETPEQLELRRKE--KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
Q ETP++LE R + G+KDK V+RE+C V + GT+ ++L A YL+ L
Sbjct: 637 QMETPKELEKRNSQAAAGAKDKAVRREVCEVYSAGTVRHADMLGQA--ARYLLVL 689
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 140/519 (26%), Positives = 226/519 (43%), Gaps = 69/519 (13%)
Query: 474 FGICVVDVATSRIILGQVMDDLDCS--VLCCLLSELRPVEII-KPANMLSPETERAILRH 530
F C+VDV+T R+ L ++ DD + L LL++ PVE++ P N+ P + +L+
Sbjct: 778 FAACLVDVSTCRVSLVRLSDDPTAAWPSLRLLLAQTLPVEVVYSPTNI--PASVLKLLKF 835
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+P L PL+ F D E+ + I +R+ A + S+ ++S + +
Sbjct: 836 LPSP--PQLSPLTSFPDLLGAHTEVDRYITSRLDALTSKSNASSSSSSSSASSPASRSSS 893
Query: 590 ILS----------ELIST-GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
+ S EL T D + A+GG YL++ LD ++L +FE
Sbjct: 894 LSSSSSSSPAQSLELCRTLCDRWPSLHCAVGGLCVYLRECRLDASVLPLCQFESF----- 948
Query: 639 GDMAKKP----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+P +VLDA AL LE+ + ++ G + L L+ VTAFG RLLR WL
Sbjct: 949 -----RPRDASVLVLDAHALRQLEILQ-TQDGCAKQALLGYLDRTVTAFGHRLLRRWLVA 1002
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL N + R DAV L N P ++ + RKAL PD+ERL A++ A R +
Sbjct: 1003 PLRNVAELTRRLDAVDWL--CNSPESVADIRKALQACPDIERLSAKICAQGLQGER---R 1057
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP---------- 803
V ++ +K L +F + L ++ L L + ++
Sbjct: 1058 AVYFDHFHQKLLADFFALLDAFLSVESLAKRLAQRLATSHGQEAAEEREAAEEREGEEGR 1117
Query: 804 -------------GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
G P + ++ + K V N G IP GV YD +++
Sbjct: 1118 GGRLLDLCADREHGGLFPPLGELVANLKSK---VAINADGHKIPAKGVLAAYDDTVTEMQ 1174
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE--LRSSKKGFF 908
E++ L L + R S+ +V K Y +E P+++ + R +E + SS+KGFF
Sbjct: 1175 EVQQKLENLLDDLRSSWKMKSLQFVH-SKFKYEVECPDTVSKELLRTHECDITSSRKGFF 1233
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
R+ TP I +L+ EL E +++ L F H
Sbjct: 1234 RFRTPEICELVAELEDLEQKQKDMFYPFFSILFNAFYSH 1272
>gi|221484273|gb|EEE22569.1| DNA mismatch repair protein, putative [Toxoplasma gondii GT1]
Length = 1676
Score = 132 bits (333), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 18/175 (10%)
Query: 300 RDAKRRRPGDVY--YDPRTLYLP-PD--FLR-----NLSEGQKQWWEFKSKHMDKVIFFK 349
RD RR D YD +L++P PD R +++ G Q+WE K +H DK+I FK
Sbjct: 511 RDISGRRAIDCGEDYDFSSLWIPSPDSQLARAHARPHMTPGMAQYWEIKKEHFDKLILFK 570
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKG----EQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+GKFYEL DA + LDL++M G +PHCGFPE+N +L + GY+V+VVE
Sbjct: 571 IGKFYELVYGDACAAHRILDLKWMGGGGADAKPHCGFPEQNLHFQARQLVQAGYKVVVVE 630
Query: 406 QTETPEQLELRRKE--KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
Q ETP++LE R + G+KDK V+RE+C V + GT+ ++L A YL+ L
Sbjct: 631 QMETPKELEKRNSQAAAGAKDKAVRREVCEVYSAGTVRHADMLGQA--ARYLLVL 683
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 224/519 (43%), Gaps = 69/519 (13%)
Query: 474 FGICVVDVATSRIILGQVMDDLDCS--VLCCLLSELRPVEII-KPANMLSPETERAILRH 530
F C+VDV+T R+ L ++ DD + L LL++ PVE++ P N+ P + +L+
Sbjct: 772 FAACLVDVSTCRVSLVRLSDDPTAAWPSLRLLLAQTLPVEVVYSPTNI--PASVLKLLKF 829
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEI-KNIYNRITA----------ESLNKADSNVANSQA 579
+P L PL+ F D E+ + I +R+ A S + A S + S +
Sbjct: 830 LPSP--PQLSPLTSFPDLLGAHTEVDRYITSRLDALTSKSNASSSSSSSSASSPASQSSS 887
Query: 580 EGDGLTCLPGILSELIST-GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGF 638
+ P EL T D + A+GG YL++ LD ++L +FE
Sbjct: 888 LSSSSSSSPAQSLELCRTLCDRWPSLHCAVGGLCVYLRECRLDASVLPLCQFESF----- 942
Query: 639 GDMAKKP----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLAR 694
+P +VLDA AL LE+ + ++ G + L L+ VTAFG RLLR WL
Sbjct: 943 -----RPRDASVLVLDAHALRQLEILQ-TQDGCAKQALLGYLDRTVTAFGHRLLRRWLVA 996
Query: 695 PLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRNSNK 753
PL N + R DAV L N P ++ + RKAL PD+ERL A++ A R +
Sbjct: 997 PLRNVAELTRRLDAVDWL--CNSPESVADIRKALQACPDIERLSAKICAQGLQGER---R 1051
Query: 754 VVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP---------- 803
V ++ +K L +F + L ++ L L + ++
Sbjct: 1052 AVYFDHFHQKLLADFFALLDAFLSVESLAKRLAQRLATSHGQEGAEEREAAEEREGEEGR 1111
Query: 804 -------------GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
G P + ++ K V N G IP GV YD +++
Sbjct: 1112 GGRLLDLCADREHGGLFPPLGELVASLKSK---VAINADGHKIPAKGVLAAYDDTVTEMQ 1168
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE--LRSSKKGFF 908
E++ L L + R S+ +V K Y +E P+++ + R +E + SS+KGFF
Sbjct: 1169 EVQQKLENLLDDLRSSWKMKSLQFVH-SKFKYEVECPDTVSKELLRTHECDITSSRKGFF 1227
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
R+ TP I +L+ EL E +++ L F H
Sbjct: 1228 RFRTPEICELVAELEDLEQKQKDTFYPFFSILFNAFYSH 1266
>gi|429759390|ref|ZP_19291889.1| DNA mismatch repair protein MutS [Veillonella atypica KON]
gi|429179666|gb|EKY20905.1| DNA mismatch repair protein MutS [Veillonella atypica KON]
Length = 873
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 187/417 (44%), Gaps = 78/417 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ + KS+H D+++FF++G FYELF DA + ++EL++ + P CG P
Sbjct: 10 EQYLDIKSRHSDELLFFRLGDFYELFNEDALIASRELNITLTGRPTGNEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIQVITPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N + + E+ + + DV+T +I +V D + S +
Sbjct: 120 NDARSNNFLALFYLVKEA------------WILVFSDVSTGEVIWDRVPQD-NISQIYDS 166
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P++ + + N +V L P + F
Sbjct: 167 LSMYRPAEIIVPEGTILPQSIVDFIHNQFNNVV--LSPFTSF------------------ 206
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
ES++ A +AN+ + GL VL+ALG L YL+
Sbjct: 207 -ESVDFA-CKLANNHFQDMGLM---------------EEDVLAALGFMLLYLQDVI---- 245
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + M ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 246 -----KTEIAHINYVHQMDVGNRLILDTSSLRHLEITHNLRDGGVKGTLLDVLDRTLTPM 300
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AVA L N E + L + D ER++ R+
Sbjct: 301 GARLLKQWLESPLTDISTIQRRQAAVAELISRNGE-RCEIQGYLDCIYDFERIVGRI 356
>gi|237838321|ref|XP_002368458.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
gi|211966122|gb|EEB01318.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
Length = 1607
Score = 132 bits (332), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 104/175 (59%), Gaps = 18/175 (10%)
Query: 300 RDAKRRRPGDVY--YDPRTLYLP-PD--FLR-----NLSEGQKQWWEFKSKHMDKVIFFK 349
RD RR D YD +L++P PD R +++ G Q+WE K +H DK+I FK
Sbjct: 439 RDISGRRAIDCGEDYDFSSLWIPSPDSQLARAHARPHMTPGMAQYWEIKKEHFDKLILFK 498
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKG----EQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
+GKFYEL DA + LDL++M G +PHCGFPE+N +L + GY+V+VVE
Sbjct: 499 IGKFYELVYGDACAAHRILDLKWMGGGGADAKPHCGFPEQNLHFQARQLVQAGYKVVVVE 558
Query: 406 QTETPEQLELRRKE--KGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMAL 458
Q ETP++LE R + G+KDK V+RE+C V + GT+ ++L A YL+ L
Sbjct: 559 QMETPKELEKRNSQAAAGAKDKAVRREVCEVYSAGTVRHADMLGQA--ARYLLVL 611
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 140/522 (26%), Positives = 224/522 (42%), Gaps = 72/522 (13%)
Query: 474 FGICVVDVATSRIILGQVMDDLDCS--VLCCLLSELRPVEII-KPANMLSPETERAILRH 530
F C+VDV+T R+ L ++ DD + L LL++ PVE++ P N+ P + +L+
Sbjct: 700 FAACLVDVSTCRVSLVRLSDDPTAAWPSLRLLLAQTLPVEVVYSPTNI--PASVLKLLKF 757
Query: 531 TRNPLVNDLVPLSEFWDAETTVLEI-KNIYNRITAESLNKADSNVANSQAEGDGLTCLPG 589
+P L PL+ F D E+ + I +R+ A + S+ ++S + +
Sbjct: 758 LPSP--PQLSPLTSFPDLLGAHTEVDRYITSRLDALTSKSNASSSSSSSSSSSASSPASL 815
Query: 590 ILS-------------ELIST-GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPC 635
S EL T D + A+GG YL++ LD ++L +FE
Sbjct: 816 SSSLSSSSSSSPAQSLELCRTLCDRWPSLHCAVGGLCVYLRECRLDASVLPLCQFESF-- 873
Query: 636 SGFGDMAKKP----YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
+P +VLDA AL LE+ + ++ G + L L+ VTAFG RLLR W
Sbjct: 874 --------RPRDASVLVLDAHALRQLEILQ-TQDGCAKQALLGYLDRTVTAFGHRLLRRW 924
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEANGRN 750
L PL N + R DAV L N P ++ + RKAL PD+ERL A++ A R
Sbjct: 925 LVAPLRNVAELTRRLDAVDWL--CNSPESVADIRKALQACPDIERLSAKICAQGLQGER- 981
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP------- 803
+ V ++ +K L +F + L ++ L L + ++
Sbjct: 982 --RAVYFDHFHQKLLADFFALLDAFLSVESLAKRLAQRLATSHGQEGAEEREAAEEREGE 1039
Query: 804 ----------------GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
G P + ++ K V N G IP GV YD
Sbjct: 1040 EGRGGRLLDLCADREHGGLFPPLGELVASLKSK---VAINADGHKIPAKGVLAAYDDTVT 1096
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE--LRSSKK 905
+++E++ L L + R S+ +V K Y +E P+++ + R +E + SS+K
Sbjct: 1097 EMQEVQQKLENLLDDLRSSWKMKSLQFVH-SKFKYEVECPDTVSKELLRTHECDITSSRK 1155
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
GFFR+ TP I +L+ EL E +++ L F H
Sbjct: 1156 GFFRFRTPEICELVAELEDLEQKQKDTFYPFFSILFNAFYSH 1197
>gi|320354737|ref|YP_004196076.1| DNA mismatch repair protein MutS [Desulfobulbus propionicus DSM
2032]
gi|320123239|gb|ADW18785.1| DNA mismatch repair protein MutS [Desulfobulbus propionicus DSM
2032]
Length = 889
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 193/457 (42%), Gaps = 77/457 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPE 384
+Q+ E K ++ ++F++MG FYE+F DA V AK L + P CG P
Sbjct: 12 QQYLEIKEQYPGTILFYRMGDFYEMFFEDAVVAAKVLGITLTSRSHKDEANKIPMCGVPF 71
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
S + K+ + GYRV + EQ E P ++ KG +V+RE+ VVT G T+ +
Sbjct: 72 HAVSGYLGKMVKAGYRVAICEQVEDP------KEAKG----IVRREVIRVVTPGVTTDDQ 121
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCL 503
LL D Y+ AL +S + + G+ ++D++T R + +V D L +
Sbjct: 122 LLDEKADC-YVCALVVQKKS----TKEHLAGLALLDISTGRFQICEVSFSPKDPGALVDV 176
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN----IY 559
S LRP E +L P+ E ++ L PL+ + L + +
Sbjct: 177 FSRLRPAE------LLIPQAE-----------LDTLAPLTHLLSQQMGQLCLTARPDFHF 219
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+TA + AN G C D+ + + A G L YL+++
Sbjct: 220 ETVTAIATLTEHFRTANLA----GFGC------------DAYTAAIDAAGALLLYLRET- 262
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
K EL + + Y+++D + NLE+ E G G+L A L+
Sbjct: 263 --------QKSELAHVKRIMPLHQSGYLIIDDASRRNLELTETLVGGQRQGSLLATLDRT 314
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLA 738
T G RLLR WL PL + I R D V L + QP R L + D+ERL +
Sbjct: 315 ATPMGARLLRRWLLFPLQDRKEILRRLDGVEEL--IEQPAVRNTLRSLLDSIYDLERLSS 372
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC 775
RL N R+ + + + QL + L+GC
Sbjct: 373 RLVL-GHGNARDLSAI----KTSLAQLPDLHHQLNGC 404
>gi|121533677|ref|ZP_01665504.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
gi|121307668|gb|EAX48583.1| DNA mismatch repair protein MutS [Thermosinus carboxydivorans Nor1]
Length = 861
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 160/615 (26%), Positives = 251/615 (40%), Gaps = 134/615 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPE 384
+Q+ E K +H DK++FF++G FYE+F DA + A+EL++ + G P CG P
Sbjct: 10 EQYREIKRQHADKILFFRLGDFYEMFFEDAEIAARELEIT-LTGRDGGAGRRVPMCGVPF 68
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +L KGY+V + EQ E P+Q KG +V+RE+ ++T GT+
Sbjct: 69 HAADTYIARLINKGYKVAICEQVEDPKQ------AKG----IVRREVIKIITPGTVLSDV 118
Query: 445 LLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
LL PD S YL+ + E N + D++T + LC
Sbjct: 119 LL---PDKSNNYLVVIHEQND---------IITMAGADISTGECYWADFAGPYRLNTLCD 166
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L L P EI+ + ET L + T L I+N +
Sbjct: 167 HLYRLSPAEIVLTGLLTDKETLDTFLA-------------NRLHGCTITNLAIEN--SET 211
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
T E L + + + LP SG+ + A+G L+YL ++
Sbjct: 212 TQELLQH---HFPDEE--------LP----------HSGAAI--AVGHLLYYLHQTL--- 245
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
K +L + +M +D AL NLE+ N R G TL + L+ TA
Sbjct: 246 ------KTDLSHVNRLMRYNAAEFMTIDTAALRNLEITRNLRDGGRKDTLLSILDFTQTA 299
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLR---GVNQPFALEFRKALSRLPDMERLLAR 739
G RLL+ WL PL + I RQDAV L GV Q ++ L + D+ER++ R
Sbjct: 300 MGGRLLKKWLEYPLLSVHEIIRRQDAVDELLTNPGVRQV----LQEKLGHIYDLERIVTR 355
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISA-LHGCELMDQACSSLGAILENTESRQLH 798
+ ANGR+ A K+ L + LH + +GA +E E
Sbjct: 356 AEVGT-ANGRDLI-------ALKQSLSSLPTIKLHVQSMQSALLGEIGAKMETYED---- 403
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEASLT 857
IV+++ D +N + GG + Y+ +++EI
Sbjct: 404 -----------IVALI-------DRAIVDNPPHSVRDGGIIKTGYNQELDELREIAQDSQ 445
Query: 858 KHL-----KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ L +E+ + T I + +G + Y +EV + R +VP +Y + + R
Sbjct: 446 QWLMAFEAREKER----TGIKSLKVGYNKVFGYYIEVTNANRAAVPSEYIRKQTLTSAER 501
Query: 910 YWTPNIK----KLLG 920
Y TP +K K+LG
Sbjct: 502 YITPELKEFETKVLG 516
>gi|134109935|ref|XP_776353.1| hypothetical protein CNBC5700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818294|sp|P0CO93.1|MSH3_CRYNB RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|50259027|gb|EAL21706.1| hypothetical protein CNBC5700 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1191
Score = 132 bits (332), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 163/658 (24%), Positives = 270/658 (41%), Gaps = 113/658 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ+ E K ++ D ++ ++G Y+ DA ++EL + FP RNF
Sbjct: 243 EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPNRNFFTA 293
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
++V+KL GY+V V+ QTET +K +++ R++ + T T
Sbjct: 294 SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFARKLTHLFTAATY 349
Query: 441 TEGELL-------------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
E L +A P + L+A+ E AS + +CVV
Sbjct: 350 VEDPSLSSSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVP- 408
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL-------RHTRNP 534
T I + D + L L+ L P E++ P L+ TE+ + RN
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLTKATEKVLTYFAGEPKHRGRNA 468
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYN-RITAESLNKADSN-VANSQAEGDGLTCLPGILS 592
+ + + +DA L N Y+ + +++K D N + EG+ L LS
Sbjct: 469 VRIERIDNIPEYDAAFDFL--TNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLS 526
Query: 593 E-----------LISTGDSGS-----------QVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ +++G S S QV+ ++ + Y+K+ L+
Sbjct: 527 QDGADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKH---- 582
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
S F A + +M+L + L NLE+++N G G+L L+HC T GKRLLR
Sbjct: 583 ----TSSFVRFANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLRE 638
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RPL + ++ R DA+ + N + R L +PD+ R L R
Sbjct: 639 WVGRPLLDVAALKARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR----------- 687
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
V Y A +L + L L + ++G + S L++I LP I
Sbjct: 688 ----VQYGKATPNELATLLITL--VRLASEFKPNMGNVF---RSCLLNNI---PNTLPTI 735
Query: 811 VSILKHFKDAFDWVEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
+ + F +A + +A N+ + P D+ C V E+E L +HL E RK+
Sbjct: 736 LDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKI 793
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
L ++ Y+T+ YL+EVP VP + S+ + RY TP I + E +Q
Sbjct: 794 LKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKERTQ 851
>gi|114327080|ref|YP_744237.1| DNA mismatch repair protein MutS [Granulibacter bethesdensis
CGDNIH1]
gi|122327938|sp|Q0BV38.1|MUTS_GRABC RecName: Full=DNA mismatch repair protein MutS
gi|114315254|gb|ABI61314.1| DNA mismatch repair protein mutS [Granulibacter bethesdensis
CGDNIH1]
Length = 926
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 183/420 (43%), Gaps = 93/420 (22%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPERN 386
QW+ K++H D ++FF+MG FYELF DA A LD+Q K GE P CG P
Sbjct: 56 QWFVLKNQHPDALLFFRMGDFYELFFQDAENAAATLDIQLTKRGLHEGEPIPMCGVPVHA 115
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
M + +L R+G+RV +VEQ E P+ R KG ++R++ +VT GT+TE LL
Sbjct: 116 AEMYLSRLIRRGWRVAIVEQMENPKN----RAGKGP----IRRDVVRLVTPGTITEETLL 167
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A + L+A+T+S G +D++T + LD S L LL
Sbjct: 168 DAG-RPNLLLAITQSGNR---------LGAAWLDISTGLF----ETESLDESGLTALLGR 213
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA----ETTVLEIKNIYNRI 562
L P EI+ P+++ H E WDA E V + N R+
Sbjct: 214 LDPAEILCPSSL-----------HL------------EMWDARRGPEQPVSDPANARARL 250
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
AE+ + + NV S + + + + Q L
Sbjct: 251 -AEAYDVSHINVFGSFTDAEAMAAM---------------QALD---------------- 278
Query: 623 TLLRFAKFELLPCSGFG-DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+R A+ LP G + + + +DA +LE+ + +R G + TL + + +T
Sbjct: 279 -YVRDAQMGALPRLGHPVPVGEAGRLAMDASTRASLEI-DRARDGGTERTLLSAVQRTLT 336
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARL 740
G R+L WL PL + +I RQD L + QP ++ R+ L PDM R L R+
Sbjct: 337 PAGGRMLAAWLGAPLTDRTVITARQDGWGWL--LEQPTLSMRLRETLRGCPDMARALGRI 394
>gi|389693740|ref|ZP_10181834.1| DNA mismatch repair protein MutS [Microvirga sp. WSM3557]
gi|388587126|gb|EIM27419.1| DNA mismatch repair protein MutS [Microvirga sp. WSM3557]
Length = 906
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 195/415 (46%), Gaps = 66/415 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHCGFPERN 386
Q+ E K+ + D ++F++MG FYELF DA + ++ L + ++ + P CG P
Sbjct: 33 QYIEIKAANPDSLLFYRMGDFYELFFEDAEIASQSLGIVLTKRGKHQGQDIPMCGVPVER 92
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+++L G+RV V EQTE P + K++GSK V + ++ +VT GT+TE LL
Sbjct: 93 ADDYLQRLIGLGHRVAVCEQTEDPAEA----KKRGSKSVVRR-DVVRLVTPGTITEERLL 147
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A+YL+A+ S T C+G+ VD++T +L + D + L ++
Sbjct: 148 EPG-RANYLLAIARRRAS----DTQWCYGLAAVDISTGHFVLSET----DGTGLSAEIAR 198
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS-EFWDAETTVLEIKNIYNRITAE 565
P EI+ P + R+ + TR + PLS E D + +K+ + T +
Sbjct: 199 FEPREILVPDVIHDDPDLRSFWQETRA----SITPLSREGLDPASAERRLKDYFGVATLD 254
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
S A S AE ++A G LFY++K+ +D
Sbjct: 255 SFG------AFSPAE------------------------ITAAGSALFYIEKTQID---- 280
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
++ L P S A + +DA NLE+ + SG+ +G+L A ++ VT G
Sbjct: 281 --SRPALNPPSRDTSGAA---LAIDAATRANLEL-TRTLSGERAGSLLATIDCTVTPGGA 334
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
RLL LA PL + IR+RQDAV L G N R+ L R PD+ R ++RL
Sbjct: 335 RLLAERLAGPLTHPDRIRDRQDAVTTLVG-NNDLRDRLRRILKRSPDLARAISRL 388
>gi|400971|sp|P13705.3|MSH3_MOUSE RecName: Full=DNA mismatch repair protein Msh3; AltName:
Full=Protein repair-1; Short=REP-1; AltName:
Full=Protein repair-3; Short=REP-3
gi|200706|gb|AAA40052.1| Citations 2 and 3 contain revisions to the original sequence in
Citation 1. The name of the gene was changed after
Citation 1 from Rep-1 to Rep-3 to avoid naming conflict
with an unrelated gene.; complete cds of major mRNA [Mus
musculus]
Length = 1091
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 152/654 (23%), Positives = 273/654 (41%), Gaps = 77/654 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + G+ V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSEP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEMVQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIV------ELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 676
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 677 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 736
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
P I + L+Q + + + F EH++ + V A + I
Sbjct: 737 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIF 790
>gi|392960659|ref|ZP_10326125.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|421054583|ref|ZP_15517550.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|421057355|ref|ZP_15520199.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
gi|421065506|ref|ZP_15527247.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|421071446|ref|ZP_15532564.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392440685|gb|EIW18354.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|392447073|gb|EIW24336.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392454795|gb|EIW31614.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|392458760|gb|EIW35254.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|392463263|gb|EIW39233.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
Length = 864
Score = 131 bits (330), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 205/458 (44%), Gaps = 89/458 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQ--PHCGFPERNF 387
+Q+ E KS+H ++++FF+MG FYE+F DA + ++EL++ G Q P CG P
Sbjct: 10 EQYLEIKSQHENEILFFRMGDFYEMFFTDAELASRELEITLTARDGGQRVPMCGIPYHAA 69
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ KL KGY+V + EQ E P+Q KG +VKRE+ ++T GT+ LL
Sbjct: 70 DTYIAKLISKGYKVAICEQVEDPKQ------AKG----IVKREVIKIITPGTIIAENLL- 118
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
PD + +N + + D++T + + + L L L
Sbjct: 119 --PDNN-------NNYLAVLYEEEEELILAAADISTGECLWATFLGSQRLTALYDQLFRL 169
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
P E++ + + ++ L+ F I NRI
Sbjct: 170 MPTELVLASK------------------IENIEKLNTF------------ISNRI----- 194
Query: 568 NKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ--VLSALGGTLFYLKKSFLDETLL 625
+ ++ D L + + + T D Q L+A+G L+YL ++
Sbjct: 195 ----PHCTHTTLTIDNLMLVSDLPKQHFMTDDLPQQDVALAAIGCLLYYLHQT------- 243
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K +L + + Y+ +D+ ++ NLEV N R G TL L++ TA G
Sbjct: 244 --VKTDLSHINRLINYNAFEYLTIDSTSMRNLEVTRNVRDGGKKDTLLYVLDYTKTAMGG 301
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
RLL+ WL PL N+ I +RQD++A L + +P + + L+ + D+ER+L R+ +
Sbjct: 302 RLLKKWLEYPLMNTTHIIQRQDSIAEL--LEKPTLRQTIHETLANIYDLERILTRIEVGT 359
Query: 745 EANGRN-----SNKVVLYEDAAKKQLQE----FISALH 773
A+ R+ S+ +VL K+QLQ+ F+S LH
Sbjct: 360 -ASARDLIALKSSLMVL--PTIKEQLQKTNTVFLSNLH 394
>gi|393238523|gb|EJD46059.1| hypothetical protein AURDEDRAFT_87246 [Auricularia delicata
TFB-10046 SS5]
Length = 960
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 158/660 (23%), Positives = 278/660 (42%), Gaps = 78/660 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKEL-DLQYMKGEQPHCGFPERNFSM 389
+KQ FK K+ ++ F++G Y + DA V A+ L + Y FP + S
Sbjct: 83 EKQVMHFKEKYSGILLIFEVGYKYRFYGEDARVAAQALGHVCYRNRNFLSASFPVTSRSQ 142
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V+KL G++V ++ Q ET +K +++K+ +R++ + T T + N
Sbjct: 143 HVKKLLSLGHKVGIIGQAETAAL----KKVGNNRNKLFERKLLHLWTSATYIDDLDSHDN 198
Query: 450 PDASY------LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
D + +M L E Q+ ++ G+ V +T ++ + D + L
Sbjct: 199 TDEMHQGSPPSIMCLVEERQNTTGENVR--IGLVSVTSSTGDVVYDEFEDTRVRTELETR 256
Query: 504 LSELRPVEIIKPANMLSPETERAI-------LR-HTRNPLVNDLVPLSEFWDAETTVLEI 555
++ L+P E++ P+ L+ T+ + +R TR + S +DA + +
Sbjct: 257 IAYLKPWELLLPSKGLTKLTDEMLKLVDTYSMRGQTRTERFKSNMDYSAAFDALSKASKA 316
Query: 556 KNIYNRITAE--SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
+ + S+ KA + S+A + LP QV+ A+
Sbjct: 317 GGDDDAASGRKFSITKASCQLTQSRAVVAAILDLP-------------RQVVVAIAQVFK 363
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL++ L LL F ++K +M+L+A L NLEVF+N + G+L+
Sbjct: 364 YLEQYKLSHVLLH--------AKAFRRFSEKTHMLLNASTLTNLEVFQNQTTLTKKGSLW 415
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRL- 730
L+ T FG RLL+ W+ RPL + ++ER DAV +R ++ L + R+ L R
Sbjct: 416 GLLDRTETTFGSRLLKDWIGRPLVDRARLQERLDAVEEIRTPSENGHLIDQLRELLKRFS 475
Query: 731 ------PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
PD+ + L+++ NG+ ++L +SA ++ +
Sbjct: 476 SKAFEYPDLAKGLSKI-----QNGK----------CTPQELGRILSAFR--KIANTFKGF 518
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM--DY 842
SR L+ IL LP+I I++ + F + A + DM
Sbjct: 519 DAEFGPGMRSRLLNDILAT---LPSIRDIVERLTENFSFDAAAKGQKEHLWRNEDMYPAV 575
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYE 899
DS + E+ L LKE RK++ ++ Y + L Y++E+ +S +VP D++
Sbjct: 576 DSRIFAITATESDLQDELKEIRKIVHMPALKYKEVTSALADEYVVEIEKSANIAVPEDWD 635
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
L S K + RY + KLL L Q + + LQ + EH+ R V A
Sbjct: 636 LVSRTKKYSRYRSAGAAKLLFILEQHREMLDQESEEALQDFQRKISEHYVALRHAVTQLA 695
>gi|303228559|ref|ZP_07315387.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-134-V-Col7a]
gi|302516806|gb|EFL58720.1| DNA mismatch repair protein MutS [Veillonella atypica
ACS-134-V-Col7a]
Length = 873
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 186/417 (44%), Gaps = 78/417 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ + KS+H D+++FF++G FYELF DA + ++EL++ + P CG P
Sbjct: 10 EQYLDIKSRHCDELLFFRLGDFYELFNEDALIASRELNITLTGRPTGNEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIQVITPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N + + E+ + + DV+T +I +V ++ S +
Sbjct: 120 NDARSNNFLALFYLVKEA------------WILVFSDVSTGEVIWDRV-PQVNISQIYDS 166
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P++ + + N +V L P + F
Sbjct: 167 LSMYRPAEIIVPEGTILPQSIVDFIHNQFNNVV--LSPFTSF------------------ 206
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
ES+ A +AN+ + GL VL+ALG L YL+
Sbjct: 207 -ESVEHA-CKLANNHFQDMGLM---------------EEDVLAALGFMLLYLQDVI---- 245
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + M ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 246 -----KTEIAHINYAHQMDVGNRLILDTSSLRHLEITHNLRDGGVKGTLLDVLDRTLTPM 300
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AVA L N E + L + D ER++ R+
Sbjct: 301 GARLLKQWLESPLTDISTIQRRQAAVAELISRNGE-RCEIQSYLDCIYDFERIVGRI 356
>gi|365135104|ref|ZP_09343629.1| DNA mismatch repair protein MutS [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613074|gb|EHL64598.1| DNA mismatch repair protein MutS [Subdoligranulum sp. 4_3_54A2FAA]
Length = 868
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 155/607 (25%), Positives = 258/607 (42%), Gaps = 109/607 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQ---PHC 380
LS +Q+++ K +H DK++FF++G FYE+F DA + +KEL+L G++ P C
Sbjct: 4 LSPMMQQYFDIKKQHPDKILFFRLGDFYEMFYDDAILASKELELTLTGRDCGQEERAPMC 63
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P ++ V +L KGY+V + EQ E P KG +VKR+I VVT GT+
Sbjct: 64 GVPFHSYENYVARLIAKGYKVAICEQMEDPAL------AKG----LVKRDIIRVVTPGTV 113
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT----SRIILGQVMDDLD 496
E +L + ++N + T++ G+C DV+T + ++ G+ +
Sbjct: 114 IESSMLQDD----------KNNYIASIYITEKKAGVCFADVSTGTAHATVLTGEKLGPEI 163
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S LC P E++ A +L + A ++ L E D
Sbjct: 164 ISELC----RYSPSEVLFNAAILDYKEVTAYIKQ-------QLACSVELLD--------- 203
Query: 557 NIYNRITAESLNKADSNVANSQAE-GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
E+ D+ + +A+ GD G+ E S +AL L YL
Sbjct: 204 --------EAAFAPDACMEEMRAQFGDAPEKTAGLAPE--------SPAFTALAVLLGYL 247
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K++ K + + A+ YM L NLE+ E R + GTL
Sbjct: 248 KET---------QKKGVERLKTVHNYAEAQYMQLSPVTRANLELTETMRGREKKGTLLWV 298
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+ TA GKRL+R W+ +PL N I R D V L G + A + ALS++ D+ER
Sbjct: 299 LDKTQTAMGKRLMRAWIEQPLVNVAAINARLDGVEELVGDSVARA-DIAAALSKIFDIER 357
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L+ R +Y A+ +++ + CE + + L A+ + S
Sbjct: 358 LMTR---------------TVYGSASPREIYALAAT---CEQLPR----LKALARSFGSA 395
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
++ +L L I ++ F V+ N + G + Y++ ++++I
Sbjct: 396 EITALLADIDELSDIKELI------FAAVDENAPAMLKDGGVIRPGYNTEVDELRDIVHG 449
Query: 856 LTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+L + KL +T I + IG + Y +EV S VP ++ + + RY
Sbjct: 450 GKGYLATLEAKLKEETGIRTLKIGYNRVFGYYIEVSRSFSNQVPANFVRKQTLANAERYI 509
Query: 912 TPNIKKL 918
T ++K L
Sbjct: 510 TEDLKVL 516
>gi|402080962|gb|EJT76107.1| DNA mismatch repair protein MSH3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1148
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 157/674 (23%), Positives = 272/674 (40%), Gaps = 84/674 (12%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------QP 378
L+ + Q+ + K KHMD V+ ++G + F DA + AKEL + + G+ +
Sbjct: 221 LTPMEMQFLDIKRKHMDTVLIVEVGYKFRFFGEDARIAAKELSIVCVSGKFRYDEHSSEA 280
Query: 379 H------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
H P ++ ++L G++V VV Q ET +K +++ R++
Sbjct: 281 HLDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQVETAAL----KKAGDNRNAPFVRKLT 336
Query: 433 AVVTKGTLTEGELL--------SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
V TKGT + +L S P YL+ +TES A G+ V AT
Sbjct: 337 NVYTKGTYIDDDLGEPAPTTEGSGAPAGGYLLCITESAAKGAGTDEKVDVGLIAVQPATG 396
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLVP 541
II D + L L + P E++ + LS TE+ ++RH N D
Sbjct: 397 DIIYDSFEDGFMRNELETRLLHISPCELLIVGD-LSRATEK-LVRHLSGSASNVFGDRTR 454
Query: 542 LSEFWDAETTVLEIKNIYNRITAESL--NKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+ +T E + + A L N D +L++++ +
Sbjct: 455 VERVAKGKTMAAEASSHVTQFYAGKLKGNSHDERAVE-------------LLNKVLGLPE 501
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
+ LSA+ + +L + F E + K+ F + + +M+++ LE+LEV
Sbjct: 502 PVTLCLSAM---ITHLTE-FGLEHIFDLTKY-------FQSFSTRSHMLINGTTLESLEV 550
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
+ N G+L+ L+ T FG+R+LR WL RPL + G + +R AV L
Sbjct: 551 YRNQTDHSEKGSLFWALDKTKTRFGQRMLRKWLGRPLLDKGRLDDRVAAVEEL------- 603
Query: 720 ALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
F K + D L RL AS + + S + Y + +L + L
Sbjct: 604 ---FEKRATAHADK---LQRLVASIKTDLERSLIRIYYGRCTRSELLAVLQTLQ------ 651
Query: 780 QACSSLGAILENTESRQLHHILTPGK-GLPAIVSILKHFKDAFDWVEANNSGRI------ 832
+ + E +E+ ++T LPAI + + + + A N+ +
Sbjct: 652 RIAVEYARVKEPSETGFESQLVTDAICSLPAIRDTVVEYLNRINPEAARNNDKYDFFRDD 711
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLLEVPESLR 891
G D D + + +E L H + LG ++ YVT+ YL+EVP +
Sbjct: 712 TGEDGEDNDISNHKLSIASVEQDLDAHRADAAVTLGRKKAVDYVTVAGIEYLIEVPNTDL 771
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
VP + S K R+ TP++ +L+ E Q + +A + + ++ + +
Sbjct: 772 RRVPASWAKISGTKKLSRFHTPDVVRLVAERDQHKEALAAACDAAFKAMLASIADEYQPL 831
Query: 952 RQMVAATAGLTLIL 965
R VA+ A L +L
Sbjct: 832 RDAVASLATLDCLL 845
>gi|406601346|emb|CCH47006.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 1047
Score = 130 bits (328), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 151/661 (22%), Positives = 275/661 (41%), Gaps = 88/661 (13%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG------EQP------- 378
+Q + K H+DK++ ++G Y+ + DA K L++ + G E P
Sbjct: 162 QQVKDLKLLHLDKILAIQVGYKYKFYCEDAVKVHKILNIMLVPGKINIIDESPTDKLYNK 221
Query: 379 --HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
+C PE +++++L +G ++ +V+Q ET + K + KR + V T
Sbjct: 222 LAYCSIPEPRLHIHLQRLLDRGLKIGIVDQIETSAIKSVESKNSA----LFKRRLSNVFT 277
Query: 437 KGTLTEGELLSANPDASY--LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
K T E + ++ D + L+++ E + Q+ + + + T II DD
Sbjct: 278 KSTYIEYDEVNQEKDKNINSLLSIVEES---VDQNDNVLITLVSIQPLTGEIIYDTFQDD 334
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ L L + P+E I N +S TE +F ++ +
Sbjct: 335 FLRNELETRLLHMEPIEFIYFENDISELTESC---------------FQKFISINSSNIR 379
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
I N+I +S + + + L E IS Q +L + Y
Sbjct: 380 I----NKIPILKKKFFESYLNDYVLDNPKLF-------EFISEQSKEFQTCCSL--LIDY 426
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
LK+ LD + F+++ + + + +K +M+L++ +L NLE+F NS + + G+L
Sbjct: 427 LKEFQLD------SSFKIV--TNYSNFIQKNHMILNSNSLTNLEIFINSTNNEQFGSLLW 478
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
++H T FG RLLR W++ PL + I +R DAV ++ F L PD+E
Sbjct: 479 LMDHTRTKFGYRLLRKWISNPLIDREQIEKRFDAVENIQSNFNHFLENLANLLKNSPDLE 538
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA--ILENT 792
++L RL Y +K+L F L E + + G IL N
Sbjct: 539 KILNRLH---------------YGKVKRKELYIF---LFKFEEISKLIIKFGKFEILNNL 580
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFK--DAFDWVEANNSGRIIPHGGVD---MDYDSACK 847
+S L + T + + I + ++ + ++ +N I+ + ++ ++ D
Sbjct: 581 KSSYLKQLFTQLIEISESLKISNYVSMINSPNAMDDHNDDHILKYFNLNTLKINQDEIIT 640
Query: 848 K---VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + I+ K L+ R L S+ YVT ++ YL+E+ L VP+D+ +
Sbjct: 641 QDIEISNIKDEFQKELQNVRDFLKRPSMDYVTSSREPYLVEIRAGLSRIVPKDWVKINGS 700
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K RY TP I KL+ L A S+ QR + +++ + Q + A +
Sbjct: 701 KLVSRYRTPQIIKLMKLLEYHMELYLKACHSVFQRFVQDLDKNYTELNQFIKILAQYDCL 760
Query: 965 L 965
L
Sbjct: 761 L 761
>gi|407473973|ref|YP_006788373.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
gi|407050481|gb|AFS78526.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
Length = 900
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 187/432 (43%), Gaps = 68/432 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPHC 380
L+ KQ++E K K+ D ++FF++G FYE+F DA + ++EL++ E P C
Sbjct: 4 LTPMMKQYFEIKEKYTDCILFFRLGDFYEMFFDDALIASRELEITLTGREWGQEEKAPMC 63
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + L KGY+V + EQ E P + +V+R++ VVT GT+
Sbjct: 64 GVPFHSADSYIATLVDKGYKVAICEQVEDPSE----------AVGIVERDVVRVVTPGTI 113
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ + L + +YL + S D C GI VD++T + Q+ D V
Sbjct: 114 IDTKALDEKTN-NYLCCI-------YFDSNDSCAGISYVDISTGELYTTQIASKKDTLVN 165
Query: 501 CCL--LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ L+++RP E+I N+L E I+ R + P + W E L I NI
Sbjct: 166 SIIDELAKIRPTELI-VNNLLI--NENMIIDTIRKKFSIFINPYHD-WAFENP-LAIDNI 220
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ + SLN G GL D ++S G L YL ++
Sbjct: 221 KRQFSTMSLN------------GLGL-------------ADKSYSIIST-GALLEYLNET 254
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K L + + + YM+LD NLE+ E R G+L + L+
Sbjct: 255 ---------QKTSLKHINNINIYSLESYMILDINTRRNLELTETIRGKSKKGSLLSVLDR 305
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
T+ G RLL+ W+ PL + I R D V N + ++ L + D+ERL+
Sbjct: 306 TSTSMGARLLKKWIEEPLIDKEKIEYRLDIVEYFTE-NIILMNDIKEILKNVYDIERLMG 364
Query: 739 RLFASSEANGRN 750
R+ + NGR+
Sbjct: 365 RIVYGN-CNGRD 375
>gi|381207942|ref|ZP_09915013.1| DNA mismatch repair protein MutS [SAR324 cluster bacterium JCVI-SC
AAA005]
Length = 886
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 189/419 (45%), Gaps = 67/419 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHCGFPER 385
+Q+ + K +H DK++FF+MG FYE+F DA A L + + +G P CG P R
Sbjct: 3 RQFHDAKRQHPDKILFFRMGDFYEMFGDDAVTAAPILQIALTSRNKQQEGAIPMCGVPYR 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
F + +L GY+V + EQTE P K KG +V REI +VT GT EL
Sbjct: 63 AFESYLNRLTAAGYKVAICEQTEDPA------KAKG----LVNREIVRIVTPGTTVSPEL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D YL+AL + PA G+ D++T + + + ++ + S+ L
Sbjct: 113 LPPD-DNHYLVALLWQVR-PAG------IGLARADLSTGELEITE-FEESEKSLCLDFLR 163
Query: 506 ELRPVEIIKPANMLSPETE--RAILRHTRN-PLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+LRP E++ P E + + IL+ + P V D V+ I++ Y+
Sbjct: 164 QLRPSEVLLPEARTEGEAQFVQTILQLLKQLPKVGD------------QVVTIRSAYD-- 209
Query: 563 TAESLNKADSNVANSQA-EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
D+ A + E G+ L G E + G A G L Y+ ++
Sbjct: 210 -------FDTQTARQRLLEHFGILNLAGFGVEELMRGTR------AAGALLQYMGET--- 253
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ L + + + M LD + NLE+FE S +G TL+ LN CVT
Sbjct: 254 ------QQCSLSHITSIRQLQRSQTMPLDETTIRNLEIFETS-TGQKRHTLFHVLNQCVT 306
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
G R LR WL PL ++G + R DA+ + + + R+ LS + D+ R+ R+
Sbjct: 307 PMGARQLRQWLRYPLLDNGSLEARYDAIEEFQQLGR-MRQGLREQLSHVQDLPRIAGRI 364
>gi|374296085|ref|YP_005046276.1| DNA mismatch repair protein MutS [Clostridium clariflavum DSM
19732]
gi|359825579|gb|AEV68352.1| DNA mismatch repair protein MutS [Clostridium clariflavum DSM
19732]
Length = 872
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 194/445 (43%), Gaps = 95/445 (21%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ L+ +Q+ + K ++ D ++FF++G FYE+F DA + +KEL++ ++
Sbjct: 1 MATLTPMMQQYMDIKKQYEDCILFFRLGDFYEMFFTDAEIASKELEITLTGKDCGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + KL KGY+V + EQ E P + +VKR++ +VT
Sbjct: 61 PMCGVPFHSADSYICKLINKGYKVAICEQVEDP----------ATAKGIVKRDVIRIVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDV------ATSRII---L 488
GT+T+ +L + +YLM+L + FGI VD+ +TS II +
Sbjct: 111 GTVTDSAMLDDKKN-NYLMSLYKYKN---------FFGIAFVDITTGDFTSTSIIIGNTI 160
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
G++MD+ ++ P EI+ AN EF
Sbjct: 161 GKLMDE---------IARFSPSEIV--AN-------------------------GEFLKD 184
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAE-GDGLTCLPGILSELISTGDSGSQVLSA 607
E V +K +N S + + E G + S+ + ++A
Sbjct: 185 ENLVKAVKTRFNTYI--------STIEDKYFEIGYAMDKFKSYFSDHEICENEFDIYINA 236
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
G L YL+++ K L F + YM+LDA NLE+ E R +
Sbjct: 237 SGALLEYLEQT---------QKVNLNHIQSFNKYKIEEYMILDAATRRNLELTETMREKN 287
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA--LEFRK 725
G+L L+ +T+ G R LR W+ +PL N IR+R +AV R F +E R+
Sbjct: 288 RKGSLLWVLDRTMTSMGGRTLRKWIEQPLINIYDIRDRLNAV---REFKDKFMVRMEVRE 344
Query: 726 ALSRLPDMERLLARLFASSEANGRN 750
L R+ D+ERL+ ++ S AN R+
Sbjct: 345 LLKRVYDIERLMGKIVLGS-ANCRD 368
>gi|85683149|gb|ABC73550.1| CG7003 [Drosophila miranda]
Length = 322
Score = 130 bits (327), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 157/313 (50%), Gaps = 31/313 (9%)
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGFGDMA-------KKPY 646
++ D+ L ALG ++++ K L+ +L A++++ +P + ++ +
Sbjct: 17 LTPSDNYKLALKALGQCVYFINKCLLEPKVLPMARYQMYVPPDQLAEAKPAVVSALRRSH 76
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
MVLDA L NL + TL + L+HC T FGKRLL WL P + +++ERQ
Sbjct: 77 MVLDATTLSNLRIIGEEH------TLQSTLDHCCTKFGKRLLHHWLCAPSCDIEILKERQ 130
Query: 707 DAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEA--NGRNSNKVVLYEDAA 761
A+ L + P L E R L+ +PD ER LA+ LF + + G ++ +L+E+
Sbjct: 131 AAIGEL--LRLPSELQEMRALLAPMPDFERNLAQIHLFGNKQVKQTGHPDSRAILFEEKI 188
Query: 762 --KKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILTPGKGLPAIVSILKH 816
K++L F++ L G A + L + + E+ +++ + T G P + L++
Sbjct: 189 YNKQKLVGFMAVLKGF----NALTKLPLMFQQCETPLIKRITQLTTSGGSFPDLSEELRY 244
Query: 817 FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVT 876
F AFD A +G I P G+D +YD +++EIE L +L EQ + G +TY
Sbjct: 245 FATAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIEEIEKRLKTYLVEQERHFG-CRVTYFG 303
Query: 877 IGKDLYLLEVPES 889
K Y L+VPES
Sbjct: 304 SDKKRYQLDVPES 316
>gi|268326266|emb|CBH39854.1| DNA mismatch repair protein [uncultured archaeon]
Length = 864
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 187/427 (43%), Gaps = 81/427 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM--------KGEQPHCGFP 383
KQ+++ K K+ D +IFF++G FYE F DA V +KEL++ G+ P G P
Sbjct: 9 KQYYQIKEKYSDAIIFFRVGDFYETFGEDAKVASKELNIALTATGRGKGATGKIPMAGVP 68
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +++L KGY+V + EQ E +K SK K+ KRE+ ++T GT+ E
Sbjct: 69 YHAVTPYIKQLIMKGYKVAICEQIE----------DKASK-KIEKREVVRLITPGTIIED 117
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L ++YLM + GI +VDV+T L ++ D+ L
Sbjct: 118 AFLEER-HSNYLMCVNLLGGK---------VGIAIVDVSTGEFSLTELEDE------SSL 161
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+EL E +KPA ++ P++ L D +S + D + KN Y +
Sbjct: 162 LNEL---ERVKPAEIILPDS-------LELELELDTCTISRYDD---YYFDYKNAYTTLI 208
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
G+ L G + G ++A G S+L +T
Sbjct: 209 NHF----------------GVISLDGFGCSDLKVG------ITAAGAV-----TSYLRDT 241
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
R P + F YMVLD+ + NLE+F N R G GTL + L+ +T
Sbjct: 242 QKRILAHIKSPKTFF----ISDYMVLDSVTVRNLEIFNNIRDGTQRGTLVSVLDKTLTGM 297
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ L PL + G IR R++ V G + + + DMER+++R+ +
Sbjct: 298 GSRLLKKNLQFPLLDPGEIRSREEVVNAFYG-DILLRESLKTVFKEISDMERIISRV-SY 355
Query: 744 SEANGRN 750
AN R+
Sbjct: 356 GNANARD 362
>gi|401679865|ref|ZP_10811789.1| DNA mismatch repair protein MutS [Veillonella sp. ACP1]
gi|400218992|gb|EJO49863.1| DNA mismatch repair protein MutS [Veillonella sp. ACP1]
Length = 873
Score = 130 bits (326), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 186/417 (44%), Gaps = 78/417 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ + KS+H D+++FF++G FYELF DA + ++EL++ + P CG P
Sbjct: 10 EQYLDIKSRHSDELLFFRLGDFYELFNEDALIASRELNITLTGRPTGNEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIQVITPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N + + E+ + + D++T +I +V + + S +
Sbjct: 120 NDARSNNFLALFYLVKEA------------WILVFSDISTGEVIWDRVPQN-NISQIYDS 166
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ + + N +V L P + F
Sbjct: 167 LSMYRPAEIIVPEGTILPQAIVDFIHNQFNNVV--LSPFTSF------------------ 206
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
ES++ A +AN+ + GL VL+ALG L YL+
Sbjct: 207 -ESVDSA-CKLANNHFQDMGLM---------------EEDVLAALGFMLLYLQDVI---- 245
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + M ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 246 -----KTEISHINYVHQMDVGNRLILDTSSLRHLEITHNLRDGGVKGTLLDVLDRTLTPM 300
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AVA L N E + L + D ER++ R+
Sbjct: 301 GARLLKQWLESPLTDIPTIQRRQAAVAELISRNAE-RCEIQSYLDCIYDFERIVGRI 356
>gi|255994617|ref|ZP_05427752.1| DNA mismatch repair protein MutS [Eubacterium saphenum ATCC 49989]
gi|255993330|gb|EEU03419.1| DNA mismatch repair protein MutS [Eubacterium saphenum ATCC 49989]
Length = 901
Score = 129 bits (325), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 195/441 (44%), Gaps = 90/441 (20%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY---MKG---EQP 378
+ L+ +Q+ E K + ++FF++G FYE+F DA + +KEL L M G + P
Sbjct: 5 KTLTPMMRQYIEIKENNPSCILFFRLGDFYEMFFEDAELVSKELQLTLTARMSGNGEKAP 64
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
CG P + +L +KGY++ + EQ +TPE+ S K+V+REI V+T G
Sbjct: 65 MCGVPYHAADAYIARLVKKGYKIAICEQMQTPEE---------SNGKLVEREIVRVITPG 115
Query: 439 TLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV--MDDLD 496
T+ + ++L A ++Y++++T++N + FG+ D++T + + +V DL+
Sbjct: 116 TVLDEKILRAGS-SNYILSITQNN--------NNTFGLAYSDISTGELSVLEVYSTSDLE 166
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
V+ + PVEII P T + E+
Sbjct: 167 NEVVT-----INPVEIIMP----------------------------------TALKEVS 187
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS-GSQVLSALGGTLFYL 615
+ + ++ D++ + + GI S L+ G S + ++ALG L Y+
Sbjct: 188 GVVEAASGFYISYLDTDYYKQSNINEAIFSQFGIKS-LLGIGISEDAAYVNALGALLIYI 246
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAK------KPYMVLDAPALENLEVFENSRSGDSS 669
+++ S G + + YM LD + +LE+ E D +
Sbjct: 247 RRT---------------QRSSLGHIVEVHQETPSNYMSLDKSTMRSLELIEPLYEADGN 291
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSR 729
+L L T+ G RLLR+WL RPL N I +R DA+ + RKAL
Sbjct: 292 YSLVDILGRTKTSMGARLLRSWLKRPLKNLQNITKRHDAIEKFVEHKEDIK-TIRKALGN 350
Query: 730 LPDMERLLARLFASSEANGRN 750
+ D +R+ R+ + AN R+
Sbjct: 351 IYDFKRICGRI-GAGRANARD 370
>gi|125973295|ref|YP_001037205.1| DNA mismatch repair protein MutS [Clostridium thermocellum ATCC
27405]
gi|256003775|ref|ZP_05428763.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
2360]
gi|281417499|ref|ZP_06248519.1| DNA mismatch repair protein MutS [Clostridium thermocellum JW20]
gi|385778793|ref|YP_005687958.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
1313]
gi|419723190|ref|ZP_14250325.1| DNA mismatch repair protein MutS [Clostridium thermocellum AD2]
gi|419724906|ref|ZP_14251961.1| DNA mismatch repair protein MutS [Clostridium thermocellum YS]
gi|171769986|sp|A3DDI3.1|MUTS_CLOTH RecName: Full=DNA mismatch repair protein MutS
gi|125713520|gb|ABN52012.1| DNA mismatch repair protein MutS [Clostridium thermocellum ATCC
27405]
gi|255992336|gb|EEU02430.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
2360]
gi|281408901|gb|EFB39159.1| DNA mismatch repair protein MutS [Clostridium thermocellum JW20]
gi|316940473|gb|ADU74507.1| DNA mismatch repair protein MutS [Clostridium thermocellum DSM
1313]
gi|380771526|gb|EIC05391.1| DNA mismatch repair protein MutS [Clostridium thermocellum YS]
gi|380780957|gb|EIC10620.1| DNA mismatch repair protein MutS [Clostridium thermocellum AD2]
Length = 870
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 149/631 (23%), Positives = 264/631 (41%), Gaps = 138/631 (21%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ +L+ +Q+ E K ++ D ++FF++G FYE+F DA V ++EL++ ++
Sbjct: 1 MASLTPMMQQYLEIKEQYKDCILFFRLGDFYEMFFSDAEVASRELEITLTGKDCGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + KL KGY+V + EQ E P KG +VKR++ +VT
Sbjct: 61 PMCGVPFHSADSYIAKLISKGYKVAICEQIEDPAL------AKG----LVKRDVIRIVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+T+ +L + +YLM++ ++ +GI VD+ T + +
Sbjct: 111 GTVTDSAMLDEKKN-NYLMSIYKNKNY---------YGIACVDLTTGEFLSTHITFGNTF 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ L +++ P EI+ E + L+ + ++ L +F++ E ++ +++N
Sbjct: 161 NKLMDEIAKFSPSEIVVNGEFFHDENIKKTLKQRFDVYISGLE--DKFFEKEFSIQKVRN 218
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
+ E ++ ++A G L YL++
Sbjct: 219 YFKDYVIEE--------------------------------NAFDLYINASGALLEYLEQ 246
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ K L F + YM+LD NLE+ E R + G+L L+
Sbjct: 247 T---------QKVNLSHIQNFNVYRIEEYMILDMATRRNLELTETMREKNRKGSLLWVLD 297
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T+ G R LR W+ +PL N I++R DAV + + F + E R+ L + D+ER
Sbjct: 298 RTMTSMGGRTLRKWIEQPLINLHDIKDRLDAVNEFK---ERFMIRSEVRELLRAVYDIER 354
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L+ ++ S AN R+ IS H S+G
Sbjct: 355 LMTKVILGS-ANCRD-----------------LISIKH----------SIG--------- 377
Query: 796 QLHHILTPGKGLPAIVSILKH-----FKDAFDWVE---------ANNSGRIIPHGGVDMD 841
Q+ +I + L A +++L + D ++ ++ A G II G + +
Sbjct: 378 QVPYIKELLRDLKADLNVLSYNELDTLTDVYEIIDKAIVDDPPVAVKEGGIIKE-GFNEE 436
Query: 842 YD---SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVP 895
D SA K K+ A L +E+ T I + +G + Y +EV +S VP
Sbjct: 437 VDRLRSASKDGKKWIAHLESKERER------TGIKNLKVGFNKVFGYYIEVTKSYYSQVP 490
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
DY + + RY TP +K++ + AE
Sbjct: 491 DDYIRKQTLANCERYITPELKEIENTVLGAE 521
>gi|226229317|ref|YP_002763423.1| DNA mismatch repair protein MutS [Gemmatimonas aurantiaca T-27]
gi|226092508|dbj|BAH40953.1| DNA mismatch repair protein MutS [Gemmatimonas aurantiaca T-27]
Length = 912
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 168/653 (25%), Positives = 264/653 (40%), Gaps = 103/653 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K++H D ++FF+MG FYE+F DA ++ + L E P G P +
Sbjct: 10 QQYREIKARHQDAILFFRMGDFYEMFYEDAETASRAIGLTLTARNNGGAAEVPLAGIPVK 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L +GYRV + EQ E P + KG +VKRE+ +T G +L
Sbjct: 70 AAAEYLRRLVSQGYRVAICEQVEDP------KLAKG----LVKREVVETITPGAAFADDL 119
Query: 446 LSANPDASYLMALTESNQSPASQSTDRC-FGICVVDVATSRI-ILGQVMDDLDCSVLCCL 503
L A+Y+ AL D GI D++T + + G + D +
Sbjct: 120 LD-GARANYVCALAMVRDVMRDAPRDAVPVGIAAADLSTGEVRLFGVTIGDA-----PAV 173
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L P E++ N PE +LR LV E W+ + L ++ +
Sbjct: 174 LARLAPRELLLVKNAAHPELA-PVLRQAEQALVTS----REGWEFDAQ-LAADDLARQFD 227
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
SL EG GL T D+
Sbjct: 228 IRSL------------EGFGL-----------GTDDA---------------AAVGAAGA 249
Query: 624 LLRFAKFELLPCSGFGDMAKKPY------MVLDAPALENLEVFENSRSG--DSSGTLYAQ 675
LLR+ + EL P G +A+ M LD NLE+ E+ R D++GTL +
Sbjct: 250 LLRYLR-ELQP-GGLPHLARPTMERSGGVMPLDEMTRRNLELVESLRGDQRDNNGTLLSV 307
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDME 734
L+ T G R+LR WL PL I +R DAV L V P R AL + D+E
Sbjct: 308 LDRTTTPMGHRMLRQWLLAPLLEQPAIEQRLDAVTAL--VRDPVGRTALRDALDGVRDVE 365
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL AS A GR + + + + +L A+HG L + A + G +L S
Sbjct: 366 RL-----ASKAAAGRATPRELRALGDSLARLPLVAKAVHGV-LSNGAGHTAGGVL----S 415
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
L + + ++L A + I P GVD D D + +++
Sbjct: 416 AMLADWDDGAESAERLTTMLV----ARPPLTIGEEDTIAP--GVDHDLDE-LRVLRDGGK 468
Query: 855 SLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+++Q + T IT + +G + Y LE+ + R VP DY+ R + G RY
Sbjct: 469 DAIATIQQQER--ARTGITSLKVGYNRVFGYFLEISNANRHLVPDDYQRRQTLTGAERYV 526
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
TP +K+ ++ A ES + + + L +W+Q+ A + ++
Sbjct: 527 TPALKEYEEKVLNAAERIESRERELFETLRRDVGVQITRWQQVARRVATIDVL 579
>gi|302498746|ref|XP_003011370.1| hypothetical protein ARB_02429 [Arthroderma benhamiae CBS 112371]
gi|291174920|gb|EFE30730.1| hypothetical protein ARB_02429 [Arthroderma benhamiae CBS 112371]
Length = 1141
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 159/677 (23%), Positives = 274/677 (40%), Gaps = 102/677 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ ++Q E K+KH+D V+ ++G Y+ + DA + AK L + + G E P
Sbjct: 232 LTPMERQIMEIKNKHLDAVLLIQVGYKYQFYGEDARIAAKVLSIVCIPGKLRFDEHPSEA 291
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L GY+V VV+Q ET + +++ R++
Sbjct: 292 HLTRFASASVPIHRLHVHVKRLVAAGYKVGVVKQLETAA----LKAAGDNRNAPFVRKLT 347
Query: 433 AVVTKGTLTEG----ELLSA-NPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+ TK T E EL A P YL+ LTES GI V AT +I
Sbjct: 348 NMYTKATYIEDDAELELSGALEPSTGYLLCLTESGAKGQGDGEKVQIGIVAVQPATGNVI 407
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEF 545
D S + L + P E++ + LS T + + L R D V +
Sbjct: 408 YDSFEDGFMRSEIETRLLHIAPCELLLVGD-LSAATNKLVQHLAKGRMTTFGDSVRIERR 466
Query: 546 WDAETTVLE----IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
++T E I + Y A + + D+N +N +L +++ D
Sbjct: 467 EKSKTAAAEAHSHISSFYAGKMAATGSPEDTNASN-------------LLDQVLKLPDDV 513
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
+ LSA+ + +L + L E + K+ F + + +M+L+ L NLE+++
Sbjct: 514 TICLSAM---IKHLTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTNLEIYQ 562
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ-PFA 720
N S G+L+ +N T FG+RLLR W+ RPL + + ER +AV L ++
Sbjct: 563 NQTDYSSKGSLFWSMNRTRTKFGQRLLRRWVGRPLLDKAKLEERTEAVTELLDSDKSTLT 622
Query: 721 LEFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
LS++ D+E+ L R++ Y ++ +L + + M
Sbjct: 623 YNLGATLSQVRVDLEKALIRVY---------------YGKCSRPELLTMLKS------MQ 661
Query: 780 QACSSLGAILENTESRQLHHILTPGKG-LPA----IVSILKHFK-------DAFDWVEAN 827
+S + +S IL+ LP +VS L D +D+ +
Sbjct: 662 SIAASFAHVKSPADSAFKSPILSESIAILPTMHDDVVSYLNKINETAAKKDDKYDFFRES 721
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
I + + IE L HLK + LG + YV++ YL+EV
Sbjct: 722 EESEEIGEHRL---------MIGTIEYELKDHLKSIAETLGKKKVQYVSVAGIDYLVEV- 771
Query: 888 ESLRGS---VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E+ +G+ VP + S K R+ TP + K++ E Q + +A + +L+
Sbjct: 772 ENSQGALKKVPASWRKISGTKKVSRFHTPEVVKMMRERDQQKESLAAACDTAFLKLLSDI 831
Query: 945 CEHHNKWRQMVAATAGL 961
+ +R + A A +
Sbjct: 832 STKYQLFRDCIQALATI 848
>gi|338814536|ref|ZP_08626550.1| DNA mismatch repair protein MutS [Acetonema longum DSM 6540]
gi|337273472|gb|EGO62095.1| DNA mismatch repair protein MutS [Acetonema longum DSM 6540]
Length = 868
Score = 129 bits (323), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 159/613 (25%), Positives = 253/613 (41%), Gaps = 129/613 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K +H ++++FF++G FYE+F DA + ++EL++ + P CG P
Sbjct: 10 EQYRDIKRQHQEEILFFRLGDFYEMFFTDAELASRELEITLTSRDGGPGTRIPMCGVPYH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL KGY+V + EQ E P+Q + +V+RE+ ++T GT+ L
Sbjct: 70 AAENYIAKLINKGYKVAICEQVEDPKQAQ----------GIVRREVIKIITPGTVLSDAL 119
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A + +YL+AL E +QS + VD++T + C L
Sbjct: 120 LQAKTN-NYLVALHEEDQSVC---------LAAVDISTGECQWTAFSGVNRIASTCDHLF 169
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY-NRITA 564
L P EI+ F + ++I+N NRI
Sbjct: 170 TLMPAEIL-------------------------------FAGVFSEAVQIRNFAANRIPG 198
Query: 565 ---ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
++ DS + + +P L E D G+ L+ + L+YL ++
Sbjct: 199 CMDSTIKLEDSELLRQLPQQH---FVPEELPE-----DQGA--LTCISYLLYYLHQTVKS 248
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ + L FG+ ++VLDA AL NLEV N R G TL A ++ T
Sbjct: 249 D----LSHINKLTQFIFGE-----HLVLDAIALRNLEVTRNLRDGGKKDTLLAVIDFTKT 299
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL+ WL PL IR RQ+AVA L G + L ++ D ER+L R+
Sbjct: 300 AMGGRLLKKWLESPLKKISEIRNRQEAVAELIG-KPSLRTILQDNLHQIYDFERILTRI- 357
Query: 742 ASSEANGRNSNKVVLYEDA------AKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
E N+ +V + + KK LQ+ C + ++ A +T+
Sbjct: 358 ---EVGSANAKDLVALKQSLGVLPDVKKSLQQV-----SCYNLHSLADTMAA---HTDIT 406
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
L H AIV F E G I P +D+D +++EI +
Sbjct: 407 NLIH--------SAIVD-----DPPFSVREG---GMIKPGYNLDLD------ELREISHN 444
Query: 856 LTKHLKEQRKLLGD-TSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
K ++E + T I + IG + Y +EV + +VP Y + + RY
Sbjct: 445 SKKMIQELETAERERTGIKSLKIGFNKVFGYYIEVTHTNTANVPDHYTRKQTLANAERYI 504
Query: 912 TPNIK----KLLG 920
TP +K K+LG
Sbjct: 505 TPALKEFEIKILG 517
>gi|281210061|gb|EFA84229.1| DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 1354
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 149/667 (22%), Positives = 282/667 (42%), Gaps = 99/667 (14%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q E K ++ D V+ + G ++ F DA + + L++ Y+ + P +
Sbjct: 417 EQQVIEIKKQYPDTVLMVECGYKFKFFGNDAEIATRVLNIYSYVAKNFLNASVPVQRLYF 476
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT------LTEG 443
++ +L GY+V VVEQ ET + SK + +R++ + T T + E
Sbjct: 477 HLRRLVYAGYKVGVVEQIETAA----LKAVSSSKSQPFERKLTRLYTASTFIDDIDINEN 532
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+ ++ +P+ YL++ TE Q T+ F V ++T II DD+ + L
Sbjct: 533 DPVNISPN--YLVSFTE--QYKTEDLTEISF--VAVSISTGEIICDTFKDDVLRTHLETR 586
Query: 504 LSELRPVEIIKPAN---------------------MLSPETERAILRHTRNPLVNDLVPL 542
L+ L+P E++ P LS T++ I + + V
Sbjct: 587 LTHLKPTEVLLPPERTIEKQQQDTTTTTVVSPPYLYLSNLTKKCIKTYCKLNNVRVQTMT 646
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
E +D + + + Y +AD + AN+ + + LP +
Sbjct: 647 EELYDYDRALSSLVEFY---------EADKSTANTLS---SVMMLPK------------A 682
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
QV+ L L YLK+ +LL+ + + F + +++L +ENLE+ +N
Sbjct: 683 QVI-CLNIQLSYLKEFIQFTSLLKVS-------TNFKTFTLQNHLILPHSTIENLEILKN 734
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL----RGVNQP 718
G+L+ LN T G+RL+ WL +PL LI+ERQDAV L + +
Sbjct: 735 EWDKSEKGSLFWVLNQTQTIAGRRLIVEWLCKPLMKLELIKERQDAVNELITSTKTTSHN 794
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM 778
F K +PD++R L++++ S+ + +F+S + + +
Sbjct: 795 LISTFLKG--SIPDLQRNLSKIYYQSQCLPK-----------------DFLSTMKSFQKL 835
Query: 779 DQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR--IIPHG 836
DQ + L+ +S+ L+ I T + L+ + + D A+ + + H
Sbjct: 836 DQLFKEVSG-LKELKSKLLNDIFTNEQSNTKFNERLQFYLSSIDHTAASKDEKENLWSHS 894
Query: 837 GVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD--LYLLEVPESLRGSV 894
+ +K+K ++ L+ HL++ RK LG ++ Y+ K+ YL+E+P + + SV
Sbjct: 895 NIYPLIVETQEKIKTVQEELSDHLRKIRKDLGKPTLEYLHQPKNNLEYLIELPINFK-SV 953
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P+D+ ++ + RY P + L L Q K + +F E ++ + +
Sbjct: 954 PKDWLKVNATQKLARYHVPAVVTTLKLLQQNRELLTIRAKESWLDFLSKFSEDYSLFSNV 1013
Query: 955 VAATAGL 961
++ A L
Sbjct: 1014 ISKLANL 1020
>gi|268325178|emb|CBH38766.1| DNA mismatch repair protein [uncultured archaeon]
Length = 864
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 187/427 (43%), Gaps = 81/427 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM--------KGEQPHCGFP 383
+Q+++ K K+ D +IFF++G FYE F DA V +KEL++ G+ P G P
Sbjct: 9 EQYYQIKEKYSDAIIFFRVGDFYETFGEDAKVASKELNIALTATGRGKGATGKIPMAGVP 68
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +++L KGY+V + EQ E +K SK K+ KRE+ ++T GT+ E
Sbjct: 69 YHAVTPYIKQLIMKGYKVAICEQIE----------DKASK-KIEKREVVRLITPGTIIED 117
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L ++YLM + GI +VDV+T L ++ D+ L
Sbjct: 118 AFLEER-HSNYLMCVNLLGGK---------VGIAIVDVSTGEFSLTELEDE------SSL 161
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+EL E +KPA ++ P++ L D +S + D + KN Y +
Sbjct: 162 LNEL---ERVKPAEIILPDS-------LELELELDTCTISRYDD---YYFDYKNAYTTLI 208
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
G+ L G + G ++A G YL+ +T
Sbjct: 209 NHF----------------GVISLDGFGCSDLKVG------ITAAGAVTSYLR-----DT 241
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
R P + F YMVLD+ + NLE+F N R G GTL + L+ +T
Sbjct: 242 QKRILAHIKSPKTFF----ISDYMVLDSVTVRNLEIFNNIRDGTQRGTLVSVLDKTLTGM 297
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ L PL + G IR R++ V G + + + DMER+++R+ +
Sbjct: 298 GSRLLKKNLQFPLLDPGEIRSREEVVNAFYG-DILLRESLKTVFKEISDMERIISRV-SY 355
Query: 744 SEANGRN 750
AN R+
Sbjct: 356 GNANARD 362
>gi|322706947|gb|EFY98526.1| DNA mismatch repair protein msh3 [Metarhizium anisopliae ARSEF 23]
Length = 1101
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 155/663 (23%), Positives = 274/663 (41%), Gaps = 70/663 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KH+D ++ ++G + F DA AKEL + + G E P
Sbjct: 199 LTPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARTAAKELGIVCIPGKMRYDEHPSEA 258
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P S++ ++L G++V VV Q ET +K +++ R++
Sbjct: 259 HLDRFASASVPVHRLSVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNTPFVRKLT 314
Query: 433 AVVTKGTLTE--GEL---LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
V TKGT + GEL P YL+ +TE+ + GI V AT II
Sbjct: 315 NVYTKGTYIDEVGELDQRAEGAPAGGYLLCITETKSKGSGTDEKVDVGILAVQPATGDII 374
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D S + L + P E + + L+ T++ +++H N S
Sbjct: 375 HDNFEDGFMRSEIETRLLHISPCEFLIVGD-LTKGTDK-LVQHLSGSSTNVFGDRSRVER 432
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
Y+ +T +K N A +L +++ + + LSA
Sbjct: 433 VPRPPTMAAEAYSHVTQFYADKLKDTSQNETASA--------LLDKVLKLPEPVTICLSA 484
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + +LK+ L E + K+ F + +M+++ LE+LEV+ NS
Sbjct: 485 M---INHLKEYGL-EHIFDLTKY-------FQSFTTRSHMLVNGTTLESLEVYRNSTDHA 533
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
G+L+ L+ +T FG+RLLR W+ RPL + + ER AV L +++
Sbjct: 534 ERGSLFWALDKTLTRFGQRLLRKWVGRPLLDQDRLDERLAAVEELLN---------KQST 584
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
+ + D+E+LL A+++ + S + Y K E +S LH + + SS+ +
Sbjct: 585 APVDDLEKLL----ATTKTDLERSLIRIYY---GKCTRPELLSVLHTLQKIATHYSSIKS 637
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
N S L + T LP I++ + + + + A + + DY +
Sbjct: 638 PSGNPFSSPL--LATSINALPQILNTVVSYLERINLEAARKDDK---YAFFREDYQTEDI 692
Query: 848 K-----VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
+ + +E L +HLK L + YVT+ +L+EVP S +VP + S
Sbjct: 693 QDQQMGIAHVEHELGEHLKVAAAKLKKKKVDYVTVAGIEFLIEVPNSDIKNVPASWSKIS 752
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLT 962
K R+ TP + +++ E Q +A + L+ + + R V++ A L
Sbjct: 753 GTKKVSRFHTPEVMRMISERDQHREALAAACDKAFKDLLAEISSDYQPLRDAVSSLASLD 812
Query: 963 LIL 965
+L
Sbjct: 813 CLL 815
>gi|330934360|ref|XP_003304515.1| hypothetical protein PTT_17141 [Pyrenophora teres f. teres 0-1]
gi|311318822|gb|EFQ87396.1| hypothetical protein PTT_17141 [Pyrenophora teres f. teres 0-1]
Length = 1134
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 158/666 (23%), Positives = 270/666 (40%), Gaps = 84/666 (12%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KH+D V+ ++G Y+ F DA +KEL + + G E P
Sbjct: 227 LTPMEMQYLDIKRKHLDTVVIMEVGYKYKFFGEDARTASKELGIVCIPGKFRYDEHPSEA 286
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREI 431
FP ++V++L + ++V VV Q ET K G+ ++ R++
Sbjct: 287 HLDRFASASFPTHRLQVHVKRLVQANHKVGVVRQVETAA-----LKAAGTNRNTPFVRKL 341
Query: 432 CAVVTKGTLT---EG-ELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVVDVA 482
+ TKGT EG E +A A YL+ +TESN G+ V A
Sbjct: 342 TNLYTKGTYVDDIEGLETPTAGSGAGAQSTGYLLCITESNAKGWGTDEKVQVGLVAVQPA 401
Query: 483 TSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL 542
T II D S + L + P E + + LS TE+ +++H N
Sbjct: 402 TGDIIYDDFEDGFLRSEIETRLLHIAPAEFLVVGH-LSKATEK-LIQHLSASKTNVFGDR 459
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
S E Y+ I+ K N Q +GD + + +L
Sbjct: 460 SRVERVEKPNTMAAQAYSHISNFYAGKMK---PNQQLDGDKQGAILDKVHQL------SE 510
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
V L + YL + L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 511 HVTICLSAMITYLSEYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQN 562
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFAL 721
S G+L+ +N T FG+RLLR W+ RPL + + ER AV L+ G N
Sbjct: 563 QTDFTSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKSKLEERIAAVEELKDGENTIPVD 622
Query: 722 EFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ + L ++ D+E++L R++ Y+ + +L L + + +
Sbjct: 623 KLKFMLGKIKTDLEKVLIRIY---------------YKKCTRPEL------LAALQTLQE 661
Query: 781 ACSSLGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRII----PH 835
++ ES +L+ +P I L F + + A + + H
Sbjct: 662 ISGKYLSVKSPEESGFTSTLLSESVSNVPKIYDHLNSFLEKINARAAKDDDKYSFFREEH 721
Query: 836 GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLR 891
D+ + + +E L H K+ LG + + YVT+ YL+EV PE +
Sbjct: 722 EAEDI--NDLKLSIASVEDDLNTHRKDAAAKLGKSKVDYVTVAGIEYLIEVKRKAPEEKK 779
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
VP ++ S+ K R+ TP +K++L E Q + +A + L+ + +
Sbjct: 780 --VPASWQQISATKTTLRFHTPEVKRMLQERDQYKESLAAACDKAFKDLLEDISSKYQQL 837
Query: 952 RQMVAA 957
R V++
Sbjct: 838 RDCVSS 843
>gi|226289518|gb|EEH45022.1| DNA mismatch repair protein Msh3 [Paracoccidioides brasiliensis
Pb18]
Length = 1157
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 159/687 (23%), Positives = 275/687 (40%), Gaps = 110/687 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ ++Q E K KHMD V+ ++G + F DA V AKEL + + G E P
Sbjct: 242 LTPMERQIIEIKKKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKFRFDEHPSEA 301
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L GY+V VV Q ET + +++ R++
Sbjct: 302 HLTRFASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAAL----KAAGDNRNAPFVRKLT 357
Query: 433 AVVTKGTLT------EGELL---SANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
+ TKGT EG S + Y++ +TESN GI V AT
Sbjct: 358 NLYTKGTYIDDVEDLEGPRCNSSSVSTSTGYMLCMTESNAKGWGNDEKVHVGIVAVQPAT 417
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+I D S + L + P E I M S TE+ ++RH N
Sbjct: 418 GDVIYDDFEDGFMRSEIETRLLHIAPCEFIIVGEM-SKATEK-LVRHLSGSKTN------ 469
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEG-DGLTCLPGILSELISTGDSGS 602
+ + V + + N + A + +A G DG +L +++ + +
Sbjct: 470 -IFGDKMRVESVSRLKNAAVESHSHVASFYASRMKARGTDGDVTATHLLEKVLRLPEDVT 528
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LS++ + Y+ + L E + K+ F + + +M+L+ L NLE+++N
Sbjct: 529 ICLSSM---IIYMSQYGL-EHVFDLTKY-------FQPFSARSHMLLNGNTLTNLEIYQN 577
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G+L+ L+ T FG+RLLR W+ RPL N + ER A+ L+ + E
Sbjct: 578 QTDHTSKGSLFWTLDRTKTKFGQRLLRKWVGRPLLNKSELEERIAAIEELQDTARTVPTE 637
Query: 723 -FRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ LS++ D+E+ L R++ GR + E ++ L L+
Sbjct: 638 RLKSLLSKVKADLEKSLIRIY-----YGRCTRP-------------ELLTVLQTMLLI-- 677
Query: 781 ACSSLGAILENTESRQLHHILTPG------KGLPAIVSILKHFKDAFDWVEANNSGRIIP 834
S + HI +P + A+++ L ++ D V N +I
Sbjct: 678 -------------SDEFFHIKSPADLGFSSSAINAVIAALPAIRE--DIVTYLN--KINA 720
Query: 835 HGGVDMDYDSACKK-------------VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
H D + ++ + ++E L +H ++LG + Y T+
Sbjct: 721 HAAKQDDKYNFFRESEETEEILESNLGIADVEHRLKEHCAVAAEILGKKKVQYATVAGIE 780
Query: 882 YLLEV---PESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
YL+EV P +L+ VP + S K R+ TP + + + E Q + +A
Sbjct: 781 YLIEVENSPYNLK-KVPASWRKISGTKKVSRFHTPEVVQYIRERDQFKEALAAACDKAFH 839
Query: 939 RLIGQFCEHHNKWRQMVAATAGLTLIL 965
L+ + + ++R + A A L +L
Sbjct: 840 ALLADISKKYQEFRDCIQALAKLDCLL 866
>gi|71747656|ref|XP_822883.1| mismatch repair protein MSH8 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832551|gb|EAN78055.1| mismatch repair protein MSH8, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 997
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 182/425 (42%), Gaps = 73/425 (17%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P ++ +PP L ++ ++Q+WE KSKH D VIFFK GKFYEL++ DA + +E L+ +
Sbjct: 30 PSSITIPPRDLEAMAAMERQYWEVKSKHYDVVIFFKKGKFYELYDQDAAMAHREFGLKLV 89
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE+ FS +GY+V VEQ + E K ++ KVV
Sbjct: 90 VDTTNRGKMRLAGVPEQTFSEWARLFVFRGYKVGRVEQMK-----EEGESSKNARPKVVP 144
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMAL----TESNQSPASQSTDRCFGICVVDVATS 484
RE+ ++T GT+T+ ++S A +++AL + S A + R C
Sbjct: 145 RELVEILTPGTITDPMMISGY-GAVFVLALYPMGSGSVDGMAVDLSRRVVFHCPCGTNGK 203
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
G V + L+ + LL ++RP EII P + E
Sbjct: 204 ESAAGFVEEVLN--EVSALLQQIRPREIIIPRGAVDAPGE-------------------- 241
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
E K + R E + V + G L LP L G +Q
Sbjct: 242 ---------EPKGSFGRRLFEWVEGEGFQVELVEEVGTSLRKLPLEERSLKEAGRFLAQY 292
Query: 605 LSALGGTLFYLKKSFLDETLL--RFAKFELLP--------------CSG----FGDMAKK 644
+ LK S +D LL R F LL CS + + +
Sbjct: 293 FRS-------LKLSNVDSILLEARPYNFHLLKQQVTSGVPSNDRSRCSDSTLLWYERRED 345
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
P +VLDA + NLE+ N R G+L+ +N C T GKRL R+W+ RP + +I
Sbjct: 346 PGLVLDAATVSNLELVGNLRDDSERGSLFNLINRCCTNGGKRLFRSWILRPSASPRVINA 405
Query: 705 RQDAV 709
RQ+AV
Sbjct: 406 RQEAV 410
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 31/261 (11%)
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA--KKQLQEFISALHGCE 776
FA +F + LSRL D++ +S ++ + KK LQ IS + E
Sbjct: 479 FATDFERNLSRLADLKG--------------DSQQIAFVDPLVQYKKHLQLIISTVVAFE 524
Query: 777 LMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG 836
M +++ ++L T G PA+ SI K FD A SG I+P
Sbjct: 525 EMLDWSNNVQKECAPPLLQELWG--TMGAVAPAVASI----KACFDRKAAEVSGVIVPSQ 578
Query: 837 GVDMDYDSACKKVKEIEASLTKHLKEQR-KLLGDTSITYVTIGKDLYLLEVP--ESLRGS 893
G YD A + + IE L + L E R + +ITY IG++ +L+EVP E+ +
Sbjct: 579 GACPAYDEATECLDIIEKKLDEVLGELRDNIFNGAAITYSHIGRENFLVEVPLMEAPKRC 638
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
P E RS RY ++ L+ E +A+++K AL +++ + N +
Sbjct: 639 PPGFIE-RSRTSACVRYTVAGLEPLVEEHKRAKTKKADALLLVVRNIASHI---FNYFPV 694
Query: 954 MVAATAGLTLI--LLDGSLLH 972
+ ATA L LL + LH
Sbjct: 695 LYEATAALCYFDCLLSLASLH 715
>gi|14009831|gb|AAK51796.1|AF350880_1 putative mismatch repair protein MSH8 [Trypanosoma brucei]
gi|261332699|emb|CBH15694.1| mismatch repair protein [Trypanosoma brucei gambiense DAL972]
Length = 997
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 182/425 (42%), Gaps = 73/425 (17%)
Query: 314 PRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM 373
P ++ +PP L ++ ++Q+WE KSKH D VIFFK GKFYEL++ DA + +E L+ +
Sbjct: 30 PSSITIPPRDLEAMAAMERQYWEVKSKHYDVVIFFKKGKFYELYDQDAAMAHREFGLKLV 89
Query: 374 -----KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVK 428
+G+ G PE+ FS +GY+V VEQ + E K ++ KVV
Sbjct: 90 VDTTNRGKMRLAGVPEQTFSEWARLFVFRGYKVGRVEQMK-----EEGESSKNARPKVVP 144
Query: 429 REICAVVTKGTLTEGELLSANPDASYLMAL----TESNQSPASQSTDRCFGICVVDVATS 484
RE+ ++T GT+T+ ++S A +++AL + S A + R C
Sbjct: 145 RELVEILTPGTITDPMMISGY-GAVFVLALYPMGSGSVDGMAVDLSRRVVFHCPCGTNGK 203
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
G V + L+ + LL ++RP EII P + E
Sbjct: 204 ESAAGFVEEVLN--EVSALLQQIRPREIIIPRGAVDAPGE-------------------- 241
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
E K + R E + V + G L LP L G +Q
Sbjct: 242 ---------EPKGSFGRRLFEWVEGEGFQVELVEEVGTSLRKLPLEERSLKEAGRFLAQY 292
Query: 605 LSALGGTLFYLKKSFLDETLL--RFAKFELLP--------------CSG----FGDMAKK 644
+ LK S +D LL R F LL CS + + +
Sbjct: 293 FRS-------LKLSNVDSILLEARPYNFHLLKQQVTSGVPSNDRSRCSDSTLLWYERRED 345
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
P +VLDA + NLE+ N R G+L+ +N C T GKRL R+W+ RP + +I
Sbjct: 346 PGLVLDAATVSNLELVGNLRDDSERGSLFNLINRCCTNGGKRLFRSWILRPSASPRVINA 405
Query: 705 RQDAV 709
RQ+AV
Sbjct: 406 RQEAV 410
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 31/261 (11%)
Query: 719 FALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA--KKQLQEFISALHGCE 776
FA +F + LSRL D++ +S ++ + KK LQ IS + E
Sbjct: 479 FATDFERNLSRLADLKG--------------DSQQIAFVDPLVQYKKHLQLIISTVVAFE 524
Query: 777 LMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG 836
M +++ ++L T G PA+ SI K FD A SG I+P
Sbjct: 525 EMLDWSNNVQKECAPPLLQELWG--TMGAVAPAVASI----KACFDRKAAEVSGVIVPSQ 578
Query: 837 GVDMDYDSACKKVKEIEASLTKHLKEQR-KLLGDTSITYVTIGKDLYLLEVP--ESLRGS 893
G YD A + + IE L + L+E R + +ITY IG++ +L+EVP E+ +
Sbjct: 579 GACPAYDEATECLDIIEKKLDEVLRELRDNIFNGAAITYSHIGRENFLVEVPLMEAPKRC 638
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
P E RS RY ++ L+ E +A+++K AL +++ + N +
Sbjct: 639 PPGFIE-RSRTSACVRYTVAGLEPLVEEHKRAKTKKADALLLVVRNIASHI---FNYFPV 694
Query: 954 MVAATAGLTLI--LLDGSLLH 972
+ ATA L LL + LH
Sbjct: 695 LYEATAALCYFDCLLSLASLH 715
>gi|340924203|gb|EGS19106.1| hypothetical protein CTHT_0057300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1151
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 162/666 (24%), Positives = 274/666 (41%), Gaps = 75/666 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ E K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 237 LTPMEIQFLEIKRKHMDTILIVEVGYKFRFFGEDARIAAKELSIVCIPGKLRYDEHPSEA 296
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P +++V++L G++V +V Q ET +K +++ R++
Sbjct: 297 HLDRFASASIPVHRLNVHVKRLVAAGHKVGIVRQIETAAL----KKAGDNRNAPFVRKLT 352
Query: 433 AVVTKGTLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
V TKGT + GEL + YL+ LTES G+ V AT
Sbjct: 353 NVYTKGTYIDETGELDQPGEATGASAGGYLLCLTESPAKGLGTDEKVDVGLIAVQPATGD 412
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF 545
II D + L + P E + LS T++ +++H N F
Sbjct: 413 IIYDSFEDGFMRREIETRLLHISPCEFLI-VGELSKATDK-LIQHLSGSSTN------VF 464
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
D K N + AE+ + A+ E D + +L +++ +S + L
Sbjct: 465 GDKSRVERVPKG--NTMAAEAYSHVTQFYASKTNEKDPKSA--ALLEKVLKLPESVTICL 520
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+ + +L + L E + K+ F + + +M+L+ LE+LEV+ N+
Sbjct: 521 SAM---ITHLTEYGL-EHIFALTKY-------FQSFSTRQHMLLNGTTLESLEVYRNATD 569
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FR 724
G+L L+ T G+RLLR W+ RPL + ++ER +AV L + ++
Sbjct: 570 HSEKGSLLWALDKTQTRPGRRLLRKWIGRPLLDHEQLQERVEAVEELLENQNTYKVDKLT 629
Query: 725 KALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
LS + D+ER L R++ Y A + +L +S L + + S
Sbjct: 630 NMLSNIKADLERSLIRIY---------------YGKATRPEL---LSTLQALQRISIEYS 671
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
+L + +L I LPAI +I+ + D + A + + + D
Sbjct: 672 TLKTPADTGFKSRL--IAEAIMSLPAIGNIVTSYLDKINAQAARKDDK-YAFFLEEYETD 728
Query: 844 SACKK---VKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
K + +EA L H K+ LG T + YVT+ YL+EVP + VP +
Sbjct: 729 DITKHKLGIAAVEADLDLHRKDAAAKLGKKTPVNYVTVAGIEYLIEVPNTDLKYVPASWV 788
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA 959
S K R+ TP + +L+ E Q + +A + L+ + R VA+ A
Sbjct: 789 KISGTKKLSRFHTPEVIRLMNERDQHKEALAAACDAAFSNLLKSLAAEYQPLRDAVASLA 848
Query: 960 GLTLIL 965
+ +L
Sbjct: 849 TIDCLL 854
>gi|307354004|ref|YP_003895055.1| DNA mismatch repair protein MutS [Methanoplanus petrolearius DSM
11571]
gi|307157237|gb|ADN36617.1| DNA mismatch repair protein MutS [Methanoplanus petrolearius DSM
11571]
Length = 881
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 179/417 (42%), Gaps = 71/417 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGFPE 384
+Q++E KSKH V+FF+MG FYE F DA V ++ELD+ GE+ P G P
Sbjct: 10 RQFYEMKSKHPGTVLFFQMGDFYETFGEDAEVVSRELDITLTSRGRDKNGEKMPLAGVPI 69
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ +L +KGYRV V +Q E P +K KG +VKR++ ++T GT+ +
Sbjct: 70 HAGESYISRLVKKGYRVAVCDQIEDP------KKAKG----IVKRDVVRIITPGTIIDSG 119
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
++ N SYLM++ P D G +D++T + + S + +
Sbjct: 120 MIE-NSGPSYLMSVM-----PGRDGED--LGFAFLDISTGEFFISGSGNGEMFSQINSEI 171
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ RP E I P N ++ RN LV +T +I N +
Sbjct: 172 ARYRPSECIVPENCPKKISDYIT---GRNVLVTGY---------DTLHFDIDTARNYL-- 217
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
L K + N +G C+ LS + A G L Y ++
Sbjct: 218 --LEKFEVNSL------EGYGCMGMDLS------------VCAAGACLSYACET------ 251
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +L GF MVLDA L NLEV EN R+ +LY L+ T G
Sbjct: 252 ---QKSDLSHIRGFSTRLPSGSMVLDAITLRNLEVLENIRTRQGKNSLYDILDETKTPMG 308
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
R+LR+WL PL + I R +AV N + E R L R D+ER+ AR+
Sbjct: 309 SRVLRSWLTAPLVDRDNINSRLNAVEFF--FNNLYIRESLRFLLHRYADIERIAARI 363
>gi|326389401|ref|ZP_08210968.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
gi|325994406|gb|EGD52831.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus JW
200]
Length = 867
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 252/601 (41%), Gaps = 110/601 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDIKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N VN + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFKNN-NCAVN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKPYMANS------LAALFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++R+ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R +AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLEAVEELFN-DYKNRQDLKQFLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASTEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP Y + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAERYVTPELKE 511
Query: 918 L 918
+
Sbjct: 512 I 512
>gi|169334038|ref|ZP_02861231.1| hypothetical protein ANASTE_00431 [Anaerofustis stercorihominis DSM
17244]
gi|169258755|gb|EDS72721.1| DNA mismatch repair protein MutS [Anaerofustis stercorihominis DSM
17244]
Length = 891
Score = 128 bits (321), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 196/437 (44%), Gaps = 76/437 (17%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ +L+ KQ+ + + D ++F+++G FYE+F DA +KELDL ++ +
Sbjct: 1 MASLTPMMKQYLQTHEEVPDTILFYRLGDFYEMFFDDAKTASKELDLVLTGRDCGLEEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + KL KGY+V + EQ E P + KG +VKRE+ V++
Sbjct: 61 PMCGVPYHSADTYIAKLVEKGYKVAICEQVEDP------KTAKG----LVKREVQRVISP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+TEG++L + +Y+M + + FG+ D+ T + + +
Sbjct: 111 GTITEGKMLKEGEN-NYIMCIYYNKLE---------FGVTYCDITTGEFNVLSLSGENRG 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSP-ETERAILRHTRNPLVNDLVPLSEFWD--AETTVLE 554
+ L LLS + P +II + + ++ I T+ L + PL+ F+ A+ +L
Sbjct: 161 NELLSLLSRINPAQIIVNTILFEDLDLKKNISNVTKVML--EPHPLNYFFHDKAKEYILN 218
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
N+Y+ L S G ++++ G L
Sbjct: 219 QFNVYS---------------------------------LSSIGLDNNEIIVRSAGALL- 244
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+LDET K L+ + K YM LD NLE+ EN R+ + TL
Sbjct: 245 ---KYLDET----QKRALIHINEIKINEDKDYMHLDYNTKRNLEIVENLRTNNKKDTLLD 297
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDM 733
L++ VT+ G R L+ W+ PL N I RQDA+ ++ LE L + DM
Sbjct: 298 VLDNTVTSMGARELKKWVLEPLTNKDKIILRQDAIKLF--IDDVMILEDITSNLKYVKDM 355
Query: 734 ERLLARLFASSEANGRN 750
ER+++RL + ANGR+
Sbjct: 356 ERIISRL-SLDIANGRD 371
>gi|30686920|ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein MSH3; Short=AtMSH3;
AltName: Full=MutS protein homolog 3
gi|3319876|emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
Length = 1081
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 157/692 (22%), Positives = 282/692 (40%), Gaps = 97/692 (14%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFP 383
R + ++Q E KSK+ D V+ ++G Y F DA + A+ L + +M P
Sbjct: 102 RKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVP 161
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +V +L GY++ VV+QTET + ++ R + A+ TK TL
Sbjct: 162 TFRLNFHVRRLVNAGYKIGVVKQTETAAI----KSHGANRTGPFFRGLSALYTKATLEAA 217
Query: 444 ELLSAN--------PDASYLMAL------TESNQSPASQSTDRCFGICVVDVATSRIILG 489
E +S +++L+ + +E+ S D G+ V+++T ++
Sbjct: 218 EDISGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYE 277
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF--WD 547
+ D+ S L ++ L P E++ LS +TE+ ++ H P N V + +
Sbjct: 278 EFNDNFMRSGLEAVILSLSPAELLL-GQPLSQQTEKFLVAHA-GPTSNVRVERASLDCFS 335
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
V E+ ++ +I+A +L D +A G++CL + + + + A
Sbjct: 336 NGNAVDEVISLCEKISAGNLE--DDKEMKLEAAEKGMSCL-----TVHTIMNMPHLTVQA 388
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L T +LK+ + L + A F ++ M L A L+ LEV +N+ G
Sbjct: 389 LALTFCHLKQFGFERILYQGASFR--------SLSSNTEMTLSANTLQQLEVVKNNSDGS 440
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--------------- 712
SG+L+ +NH +T +G RLLR W+ PL + LI R DAV+ +
Sbjct: 441 ESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSE 500
Query: 713 -------RGVNQP-FALEFRK---ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
R + P F L A+SR D++R + R+F +
Sbjct: 501 LVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRT----------------- 543
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH---FK 818
+ EFI+ + L + LG I +++E R + L ++S++
Sbjct: 544 -AKATEFIAVMEAILLAGKQIQRLG-IKQDSEMRSMQSATVRSTLLRKLISVISSPVVVD 601
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDS---------ACKKVKEIEASLTKHLKEQRKLLGD 869
+A + A N + +D+ S A + V I L + RK L
Sbjct: 602 NAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAI 661
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
++ ++ + +L+E+P + VP ++ +S K RY P I L EL+ A
Sbjct: 662 RNLEFLQVSGITHLIELP--VDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHL 719
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
++ + F ++ ++ V A A L
Sbjct: 720 AIVNRASWDSFLKSFSRYYTDFKAAVQALAAL 751
>gi|392940989|ref|ZP_10306633.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
gi|392292739|gb|EIW01183.1| DNA mismatch repair protein MutS [Thermoanaerobacter siderophilus
SR4]
Length = 867
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 252/601 (41%), Gaps = 110/601 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDIKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N VN + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFKNN-NCAVN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKLYMANS------LATLFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++R+ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R +AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLEAVEELFN-DYKNRQDLKQFLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASTEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP Y + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAERYVTPELKE 511
Query: 918 L 918
+
Sbjct: 512 I 512
>gi|167037586|ref|YP_001665164.1| DNA mismatch repair protein MutS [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320116001|ref|YP_004186160.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856420|gb|ABY94828.1| DNA mismatch repair protein MutS [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319929092|gb|ADV79777.1| DNA mismatch repair protein MutS [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 867
Score = 127 bits (320), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 157/597 (26%), Positives = 252/597 (42%), Gaps = 102/597 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDIKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N VN + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFKNN-NCAVN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKPYMANS------LAALFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++R+ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNRNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL + I R +AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLSKEHIDARLEAVEELFN-DYKNRQDLKQFLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
L I ++ K KD D G II GG + D K E + + E+R
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNII-KGGYNEIVDKLRKASTEGKNWIANLEAEER 458
Query: 865 KLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+ T I + IG + Y +EV +S VP Y + + RY TP +K++
Sbjct: 459 E---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAERYVTPELKEI 512
>gi|297799442|ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata]
gi|297313441|gb|EFH43864.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata]
Length = 1078
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 156/654 (23%), Positives = 269/654 (41%), Gaps = 96/654 (14%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFP 383
R + ++Q E K K+ D V+ ++G Y F DA + A+ L + +M P
Sbjct: 103 RKYTPLEQQVVELKRKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHSFMTASVP 162
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +V +L GY++ VV+QTET + ++ R + A+ TK TL
Sbjct: 163 TFRLNFHVRRLVNAGYKIGVVKQTETAAI----KSHGANRSGPFFRGLSALYTKATLEAA 218
Query: 444 ELLSAN--------PDASYLMALTE---SNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
E +S +++L+ + + + ++ S D G+ V+++T ++ G+
Sbjct: 219 EDISGGGGGEEGFGAQSNFLVCVVDERVNTETGIEMSFDVRVGVVGVEISTGEVVYGEFN 278
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV---PLSEFWDAE 549
D+ S L ++ P E++ LS +TE+ +L H P N V L F +
Sbjct: 279 DNFMRSGLEAVILSFSPAELLL-GQPLSQKTEKFLLAHA-GPTSNIRVERASLDRFGNG- 335
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
V E+ ++ +I+A +L D +A +G++CL + + + + AL
Sbjct: 336 NAVDEVISLCEKISASNLE--DDKEIKVEAAEEGMSCLT-----VHTIMNMPHLTVQALA 388
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
+LK+ + L + A F L S M L A L+ LEV N+ G S
Sbjct: 389 LIFCHLKQFGFERILYQGASFRSLSSS--------TEMTLSANTLQQLEVVRNNSDGSES 440
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL----------------- 712
G+L+ +NH +T +G RLLR W+ PL N LI R DAV+ +
Sbjct: 441 GSLFHNMNHTLTVYGSRLLRHWVTHPLCNRNLISARLDAVSEIAACMGSHSSSQNSDELV 500
Query: 713 -----RGVNQP-FALEFRK---ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
R + P F L ALSR D++R + R+F +
Sbjct: 501 EDGSERTIVSPEFYLVLSSVLTALSRSSDIQRGITRIFHRT------------------A 542
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH---FKDA 820
+ EFI+ + L + LG I ++ E R + L ++S+ +A
Sbjct: 543 KATEFIAVMEAILLAGKQFKRLG-IKQDCEMRSMQSATVQSSLLKKLISVAASPAVVDNA 601
Query: 821 FDWVEANNSGRIIPHGGVDMDYDS---------ACKKVKEIEASLTKHLKEQRKLLGDTS 871
+ A N + +D+ S A + V I+ L + RK L +
Sbjct: 602 AKLLSALNKEGAVRGDLLDILITSSDQFPELAEARQAVLVIKEKLDSLISSFRKKLAIRN 661
Query: 872 ITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+ ++ + +L+E+P + VP ++ +S K RY P I L EL+ A
Sbjct: 662 LEFLQVSGITHLIELP--VDAKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALA 713
>gi|188586122|ref|YP_001917667.1| DNA mismatch repair protein MutS [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350809|gb|ACB85079.1| DNA mismatch repair protein MutS [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 869
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 156/641 (24%), Positives = 267/641 (41%), Gaps = 132/641 (20%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--------GE 376
R ++ +Q+ + K ++ D ++FF++G FYE+F DA + AKEL++ K
Sbjct: 6 RKITPMIQQYLDIKEEYPDAILFFRVGDFYEMFFEDAELAAKELEIVLTKRSVDKKDSNP 65
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + + KL KGY+V + EQ E P+Q KG +VKRE+ ++T
Sbjct: 66 IPLAGIPYHSCETYIGKLLDKGYKVAICEQVEDPQQ------AKG----IVKREVVQLIT 115
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT+ + L + ++L+ L E + FG+ VDV+T + ++
Sbjct: 116 PGTVLDSNFLK-EKEHNFLVGLCEDHN---------YFGLATVDVSTGDFFVTEISKTNY 165
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
V+ +L+ + P EII + E R A+ + ++K
Sbjct: 166 DKVIDEILT-VSPREII-----IDEEKTR----------------------ADKILSKLK 197
Query: 557 NIYNRITAES---LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
N +T +S NKA ++ SQ + L E D S +++ GG
Sbjct: 198 NYGILVTNKSQPTFNKA-CDILKSQFNVESL--------EGFGLADQKSSIIA--GG--- 243
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
FL + L+ K L + + Y+V+D+ +NLE+ E R G+L
Sbjct: 244 -----FLVQYLIDTQKTTLEHLQNVKPYSTESYLVMDSNTRKNLELCETIRQQRKEGSLL 298
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
L+ +TA G R+LR W+ PL N I R AV +N + E + L + D+
Sbjct: 299 WVLDKTLTAMGGRMLRNWIQHPLLNVDAINHRLQAVEFF--LNFMYREELARTLKNVYDL 356
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ER+L + ++Y+ A K L I+ + E++ + +L+N E
Sbjct: 357 ERVLGK---------------IIYDRATPKDL---IALSNSLEIL----PDVKDLLKNDE 394
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI------IPHGGVDMD-YDSAC 846
L+ ++ D D VE NS + + GG+ D +D
Sbjct: 395 DGTLN-------------DLMDRLPDLMDLVELINSAIVPDPPATVKEGGIIKDGFDEEL 441
Query: 847 KKVKEIE-------ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYE 899
K+K++ A+L KE R + + Y + Y +EV + VP DY
Sbjct: 442 DKIKDLSRGGKEWIANLEAKEKE-RTGIKSLKVRYNKVFG--YYIEVTKKNLDLVPEDYI 498
Query: 900 LRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
+ + R+ TP++K+ ++ +AE E I Q++
Sbjct: 499 RKQTLVNAERFVTPDLKEYEDKILKAEEEMTDLEYKIFQKI 539
>gi|389749124|gb|EIM90301.1| DNA mismatch repair protein MSH3 [Stereum hirsutum FP-91666 SS1]
Length = 1098
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 136/624 (21%), Positives = 263/624 (42%), Gaps = 56/624 (8%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q + K K+ ++ F++G Y ++ DA + AKEL + ++K P +++
Sbjct: 207 QVRQLKDKYEGVLLMFEVGYKYMFYDNDARIAAKELGIVCFVKRNFETASIPTHRGDIHL 266
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE--GELLSAN 449
+KL +G++V ++ QTET +K +++ RE+ + T T + + ++
Sbjct: 267 KKLLSQGHKVGIIAQTETAAL----KKVGENRNAPFTRELAHLYTATTFVDEMDSVDASG 322
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
A LM + E + G+ VV T + + D + L + +P
Sbjct: 323 ASAPLLMCVVEEPKGGMGVDEKVIVGMIVVCPNTGDVTWDEFEDGHMRTELETRMVHTKP 382
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ LS TER + + + + + + D T + + ++A K
Sbjct: 383 AELLLSGQKLSKPTERMLGYFVTHANGDHKIRMERYKDPMT----YSDAFEYVSAFYTRK 438
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
S+ A+ + L + + D QV+ AL + +L+ + ++LL K
Sbjct: 439 TTSSKASESFKSGEL---------MAAVTDFPKQVVIALAQCIRHLEAFDIADSLLA-TK 488
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
F F +M+L+ L NLE++ N + G+L L+ T FG RLLR
Sbjct: 489 F-------FSAFITTNHMLLNGNTLTNLEIYRNETDFTTRGSLMWILDRTTTKFGSRLLR 541
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGR 749
+W+ RPL N ++ER D V + ++ R AL LPD+ + L+R
Sbjct: 542 SWVGRPLVNKLALQERTDTVEEIVASPSMKLVQLRSALRGLPDLAKGLSR---------- 591
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI-----LENTESRQLHHILTPG 804
+ Y K+L + A + ++ A ++ + + N L + P
Sbjct: 592 -----IQYGKCTPKELSVLLPAFNKVAIIFPAMDNVSDVGFKSPILNDIIATLPRLREPV 646
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
+ L +++ +LK + + ++S + DM ++ +E L LK R
Sbjct: 647 QELISMI-VLKRAAEGDKTLMWSDSEKYPALAEADMG-------IQAVEMDLADELKSIR 698
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
++L ++ + + D YL+E+P++ VP + L SS F RY +P +K + E +Q
Sbjct: 699 RVLKKPALQWSSSRGDEYLVEIPKAESSRVPATWHLISSTSRFRRYHSPVVKAKVQERAQ 758
Query: 925 AESEKESALKSILQRLIGQFCEHH 948
+ E+A + + + ++H
Sbjct: 759 FKEMLEAAANDAFKSFLNEISQNH 782
>gi|407921660|gb|EKG14801.1| hypothetical protein MPH_08076 [Macrophomina phaseolina MS6]
Length = 1135
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 159/684 (23%), Positives = 279/684 (40%), Gaps = 107/684 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------QP 378
L+ ++Q + K H D ++ ++G + F DA V AKEL + + G+ +
Sbjct: 243 LTPMERQIIDLKQSHPDTILVVEVGYKFRFFGEDARVAAKELGIVCIPGKFRFDEHLSEA 302
Query: 379 H------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
H FP ++V++L G++V VV Q ET +K +++ R++
Sbjct: 303 HLDRFAGASFPTHRLHVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLT 358
Query: 433 AVVTKGTLTE--------GELLSAN-PDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
+ TK T + G S+N P Y++ LTESN G+ V AT
Sbjct: 359 NLYTKATYIDDVEGLEGAGANASSNSPATGYILCLTESNAKGWGTDEKVHIGVVAVQPAT 418
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVP 541
II D S + L + P E + + +S TE+ + L ++ + D
Sbjct: 419 GDIIYDDFEDGFMRSEIETRLLHIAPSEFLIVGD-VSKATEKIVHHLSGSKRNVFGDQAR 477
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
+ +T + + + A+ + AD + ++ D + L SE ++
Sbjct: 478 VERVEKPKTMAAQAYSHISNFYADKMKSADEHSESAATVLDKVHAL----SEHVTI---- 529
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
LSAL + ++ + L+ F+L F + + +M+L+ L +LE+++
Sbjct: 530 --CLSAL---ITHMTEYGLEHV------FDL--TKNFQAFSARSHMMLNGNTLSSLEIYQ 576
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
N G+L+ ++ T FG+RLLR W+ RPL N + ER AV LR ++ L
Sbjct: 577 NQTDHTVKGSLFWTMDRTKTRFGQRLLRKWVGRPLLNKEKLEERIGAVEELRNGDKVVVL 636
Query: 722 E-FRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
E ++ LS++ D+E+ L R++ Y+ + +L + L
Sbjct: 637 EKLKRLLSQVKTDLEKSLIRIY---------------YQKCTRPELLAVLQTL------- 674
Query: 780 QACSSLGAILENTESRQLHHILTPGKG-------------LPAIVSILKHFKDAFDWVEA 826
Q +S + H+ +P K LP I + F D + A
Sbjct: 675 QRIAS-----------EYAHVTSPEKAGFSSPILQEAIASLPLISKDVVGFLDRINLQAA 723
Query: 827 NNSGRII----PHGGVDM-DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL 881
+ + H D+ D+ + +E L +H KE K LG + I YVT
Sbjct: 724 KDDDKYTFFREEHETEDITDHKMG---IVSVEHDLKEHKKEIAKKLGKSKIDYVTKSGIE 780
Query: 882 YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
+L+EVP + VP + S K R+ TP + +LL E Q + +A + L+
Sbjct: 781 FLIEVPNAEVKKVPASWAKISGTKQVSRFHTPEVIRLLRERDQHKEALAAACDVAFKDLL 840
Query: 942 GQFCEHHNKWRQMVAATAGLTLIL 965
+ + +R V + A L +L
Sbjct: 841 VEIGTKYQPFRDCVQSLATLDCLL 864
>gi|340520005|gb|EGR50242.1| DNA mismatch repair protein [Trichoderma reesei QM6a]
Length = 1095
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 148/665 (22%), Positives = 278/665 (41%), Gaps = 74/665 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 193 LTPMEIQFLDIKRKHMDTILIVEVGYKFRFFGEDARIAAKELGIVCIPGKMRYDEHPSEA 252
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++ ++L G++V VV Q ET +K +++ R++
Sbjct: 253 HLDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRKLT 308
Query: 433 AVVTKGTLTE--GELLSAN---PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+ TKGT + GEL S + P YL+ +TE+ A + GI V AT II
Sbjct: 309 NLYTKGTYVDENGELDSQDASAPSGGYLLCITETASKGAGTDENVNVGILAVQPATGDII 368
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEF 545
D S + L + P E + + ++ T++ I L + + D +
Sbjct: 369 YDNFEDCFMRSEIETRLLHISPCEFLIVGD-ITKGTDKLIQHLSGSSTNVFGDRARVERV 427
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
++T E + + A+ + +A N S +L +++ ++ + L
Sbjct: 428 PKSKTMAAEAYSHVTQFYADQVKEASDNETAS-----------ALLDKVLRLPEAITICL 476
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+ + +L++ L E + K+ F + + +M+++ LE+LEV+ NS
Sbjct: 477 SAM---ITHLQEYGL-EHIFGLTKY-------FQSFSTRSHMLINGTTLESLEVYRNSTD 525
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G+L+ ++ +T FG+RLLR W+ RPL + + ER AV L ++
Sbjct: 526 HSQKGSLFWAVDKTLTRFGQRLLRKWVGRPLLDRERLDERLAAVQELLD---------KQ 576
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
+ + D+ERLL +++A+ S + Y + +L +S L + + SS+
Sbjct: 577 STPPVDDLERLL----TTTKADLERSLIRIYYGKCTRPEL---LSVLQTLQKIASHYSSI 629
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
+ + + I+ LP I+ + + D + A + +G +Y +
Sbjct: 630 KSASDVPFDSPV--IVNAITSLPQILDSVVSYLDRINAYAAKKDDK---YGFFREEYHTE 684
Query: 846 CKK-----VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYEL 900
+ + +E L +H + + S+ YVT+ YL+ VP +VP +
Sbjct: 685 EIQDHQLGIAHVEHELDEHRAVAAQKIKAKSVEYVTVAGIEYLIAVPNKDIKNVPASWSK 744
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG 960
S K R+ TP + +L+ E Q +A + + + R ++A A
Sbjct: 745 ISGTKALSRFHTPEVIRLITERDQHREALAAACDKAFKDFLASIASEYQPLRDAISALAT 804
Query: 961 LTLIL 965
L +L
Sbjct: 805 LDCLL 809
>gi|310828245|ref|YP_003960602.1| DNA mismatch repair protein MutS [Eubacterium limosum KIST612]
gi|308739979|gb|ADO37639.1| DNA mismatch repair protein MutS [Eubacterium limosum KIST612]
Length = 877
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 183/424 (43%), Gaps = 73/424 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
L+ +Q+ E K D ++FF++G FYE+F DA +KEL++ + P
Sbjct: 2 GLTPMMQQYLETHEKVKDAILFFRLGDFYEMFFDDALKASKELEIALTGRDCGLDERAPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + KL KGY+V + EQ E P KG +VKREI V++ GT
Sbjct: 62 CGVPYHAAESYITKLVEKGYKVAICEQMEDPSV------AKG----IVKREIIRVISPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ EG+LL + + +YLM+L + + G+ +D++T + ++ ++
Sbjct: 112 IAEGKLLESKKN-NYLMSLYQEKNT---------IGLAYLDISTGDFFVTEISGKNTLAL 161
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS--EFWDAETTVLEIKN 557
L + ++ P EI+ + L + N L P EF +E+ + E +
Sbjct: 162 LMDEVGKIGPSEILVNPTLFKDTGTIKTLEEKFGIMTN-LYPARYFEFKASESRLKEQFD 220
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
+Y+ +TA L + + +V A G L Y
Sbjct: 221 VYS-LTALDLERREHSV-------------------------------RAAGALLRY--- 245
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+DET R L + YM+LD NLE+ E RSG+ G+L L+
Sbjct: 246 --IDETQKRV----LTHINHVSYYKNDEYMILDLSTRRNLELTETIRSGEKKGSLLWVLD 299
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERL 736
VTA G R+LR WL PL I RQD V L P AL + + L ++ D+ER+
Sbjct: 300 KTVTAMGGRMLRRWLEAPLLEKKAIEARQDMVEEL--YRHPGALKDLKGVLGKVYDLERI 357
Query: 737 LARL 740
++
Sbjct: 358 CGKI 361
>gi|326202164|ref|ZP_08192034.1| DNA mismatch repair protein MutS [Clostridium papyrosolvens DSM
2782]
gi|325987959|gb|EGD48785.1| DNA mismatch repair protein MutS [Clostridium papyrosolvens DSM
2782]
Length = 873
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 189/421 (44%), Gaps = 74/421 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K ++ D ++FF++G FYE+F DA + ++EL++ ++ P CG P
Sbjct: 9 QQYLDIKEQYKDCILFFRLGDFYEMFFSDAELASRELEITLTGRDCGLEERAPMCGVPFH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ V +L KGY+V + EQ E P KG +VKR++ VVT GT+T+ +
Sbjct: 69 AANNYVARLVSKGYKVAICEQVEDPAL------AKG----IVKRDVIKVVTPGTVTDITM 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + +YLM++ ++ S D G D +RI G + L + +
Sbjct: 119 LDERKN-NYLMSIYKNGNFYGLASVDITTG----DFYGTRITWGNTREKLFDEI-----A 168
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS-EFWDAETTVLEIKNIYNRITA 564
+ P EII + + ++ N V+ S E+ +A T + N+
Sbjct: 169 KYLPSEIIVNTELCADNELTCEIKQRFNTYVSTFEEGSFEYGNAMDT------LRNQFEN 222
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+LN + ++A ++A G L YL+ +
Sbjct: 223 RALNIQEYDIA-----------------------------VNASGALLTYLEST------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L F A + YM+LDA + NLE+ E R G+L L+ +T+ G
Sbjct: 248 ---QKVNLSHIQNFNLYALEEYMILDASSRRNLELTETMREKSKKGSLLWVLDKTMTSMG 304
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLARLFAS 743
RLLR W+ +PL N G I R +AV L+ N+ A +E R+ L R+ D+ERL+ ++
Sbjct: 305 GRLLRKWIEQPLINHGDISLRLNAVEELK--NKFMARVEARELLKRVYDIERLMGKVILG 362
Query: 744 S 744
S
Sbjct: 363 S 363
>gi|190359866|sp|A6RPB6.2|MSH3_BOTFB RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
Length = 1133
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 153/676 (22%), Positives = 264/676 (39%), Gaps = 102/676 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQP---HCGF-- 382
Q + K KHMD ++ ++G ++ F DA AK L + + G E P H +
Sbjct: 216 QVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESHLNYFA 275
Query: 383 ----PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L GY++ +V QTET +K +++ R++ V TKG
Sbjct: 276 SASIPVHRLPVHAKRLVAAGYKIGIVRQTETAAL----KKAGDNRNAPFVRKLTNVYTKG 331
Query: 439 TL--------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
T T P YL+ +TE+ GI V AT +I
Sbjct: 332 TYIDDIDGLDTTDAPSGGAPATGYLLCITETKAKGWGTDEKVEVGILAVQPATGDVIYDN 391
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDA 548
D L L + P E++ L+ T++ + L + + D + + +
Sbjct: 392 FEDGFMRGELETRLLHIAPCELLIVGE-LTKATDKLVQHLSGSSTNVFGDRIRVERVGKS 450
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+T E Y+R+ +K ++ +++ A L L +++ + + LSA+
Sbjct: 451 KTMAAES---YSRVAQFYADKLKAHQSSNNAREQEL------LEKVLKLTEPVTICLSAM 501
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ ++ + L E + K+ F + + +M+L+ L +LE++ N
Sbjct: 502 ---ITHMTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTSLEIYTNQTDYTQ 550
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRKAL 727
G+L+ L+ T FG+RLLR W+ RPL + + ER AV L+ N P + L
Sbjct: 551 KGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKVDKLNATL 610
Query: 728 SRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
+ D+ER L R++ Y + +L + +
Sbjct: 611 REVRSDLERSLLRIY---------------YGKCTRPELLTVLQTMQRI----------- 644
Query: 787 AILENTESRQLHHILTPGKG-------------LPAIVSILKHFKDAFDWVEANNSGR-- 831
+ + H+ TP LPAI I+ F D + A N +
Sbjct: 645 -------ANEFAHVKTPSDAGFESIALNEAVASLPAIGEIVISFLDKINAQAARNDDKYA 697
Query: 832 -IIPHGGVDMDYDSACKKVKEIEASLTKH-LKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ H + D C + +E L H + KL T +TYVTI YL+EVP +
Sbjct: 698 FFLEHYETEAIGDHKC-GIGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPNT 756
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
+VP + S K R+ TP + K L E Q + SA + + + H+
Sbjct: 757 DLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSEISTHYA 816
Query: 950 KWRQMVAATAGLTLIL 965
R ++ A L +L
Sbjct: 817 LIRDTISHLATLDCLL 832
>gi|448116813|ref|XP_004203106.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
gi|359383974|emb|CCE78678.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
Length = 1008
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 166/640 (25%), Positives = 268/640 (41%), Gaps = 103/640 (16%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ--- 377
PD R L+ +KQ+ E K+ + DKV+ ++G Y+ F DA + +K L++ + G
Sbjct: 100 PD-TRKLTPLEKQFLELKANNKDKVLAIQVGYKYKFFCEDAVIASKVLNIVLVPGANNSC 158
Query: 378 -------PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
+C P+ +++ +L G +V VV+Q ET ++ E +K + RE
Sbjct: 159 DTSSDRFAYCSIPDNRLHIHLRRLLSYGLKVGVVKQMETAS---IKSVESDNKSGLFVRE 215
Query: 431 ICAVVTKGTLTEGEL-------LSANPD----ASYLMALTESNQSPASQSTDRCFGICVV 479
+ V TK T E +S N D Y++ + ++D+ GI V
Sbjct: 216 MTGVYTKATYLGDEDPPRNQNDISMNEDDEGVGDYIVCI---------DASDKKVGIVAV 266
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
AT II DD + L L L P EII ++ E L+ N +
Sbjct: 267 QPATGDIIYDTFDDDSARNELETRLIFLNPSEII----IIGDEEANIGLKKMVNIITKSG 322
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+S+ + +ES ++ N S++E G L
Sbjct: 323 NVISK----------------KRKSESDYRSSINTFFSKSEDIGQYYLLKF--------- 357
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
S +LS + L YL++ L L S F + K YM L L+ LEV
Sbjct: 358 -PSNILSCISELLEYLQEFKLSNMFLIKDNM-----SSFSN--AKKYMHLPGSTLQALEV 409
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL-RGVNQP 718
F+NS + GTL+ L++ T GKRLL+ W+A PL + LI++R DA+ L RG N
Sbjct: 410 FQNSTDYSTKGTLFWLLDYTKTKMGKRLLKKWVAMPLVSRNLIQDRLDAIDDLSRGYNN- 468
Query: 719 FALEFRKALSRLP----DMERLLARLFASSEANGRNSNK-----VVLYEDAAKKQLQEFI 769
F + + +L D+E+ L ++ SS N +K ++L D + F
Sbjct: 469 FIDSLKNKIVKLSRTGLDLEKSLIKVHYSSSHNVSKIDKKEIYLLLLNLDEISSLFRSFS 528
Query: 770 SALH------GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDW 823
S + L++ + I E+T +L +TP A+ + F+ +
Sbjct: 529 SQIALFKDSVTSRLLEDILQDILDISESTTVEKLLKYITPS----ALDN--NQFEQKVYF 582
Query: 824 VEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYL 883
N P G+ S +K+K+IE L + L++ R L + YVT KD YL
Sbjct: 583 FNLQN----YPDEGI----LSELEKIKDIEKKLDEELEKIRVQLNRPHLNYVTNLKDAYL 634
Query: 884 LEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+EV + +P D+ + K R+ +P + KL EL
Sbjct: 635 IEVRNGKMINDIPSDWIKINGTKTVSRFRSPEVTKLYKEL 674
>gi|379019249|ref|YP_005295483.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str. Hlp#2]
gi|376331829|gb|AFB29063.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str. Hlp#2]
Length = 890
Score = 126 bits (317), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 192/430 (44%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCG 381
++ +Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG
Sbjct: 20 TKMMQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCG 79
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+
Sbjct: 80 VPYHALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTII 135
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 136 EENLI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEI 182
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+P EI+ N+ S +I + L + Y
Sbjct: 183 LNELARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQ 220
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ ++NK + + D + GI G+ S + A+G L YL
Sbjct: 221 VDSVFAINKCKKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL----- 264
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ NS+ GDS G+L + LNH V
Sbjct: 265 --SLTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQ-GDSQGSLLSTLNHTV 319
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 320 TKQGGRLLYHFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI 378
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 379 -TMNRSSGRD 387
>gi|165932981|ref|YP_001649770.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str. Iowa]
gi|378721082|ref|YP_005285969.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str.
Colombia]
gi|378723792|ref|YP_005288676.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str. Hauke]
gi|379016655|ref|YP_005292890.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str.
Brazil]
gi|189083186|sp|B0BWY8.1|MUTS_RICRO RecName: Full=DNA mismatch repair protein MutS
gi|165908068|gb|ABY72364.1| DNA mismatch repair protein [Rickettsia rickettsii str. Iowa]
gi|376325179|gb|AFB22419.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str.
Brazil]
gi|376326106|gb|AFB23345.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str.
Colombia]
gi|376332807|gb|AFB30040.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str. Hauke]
Length = 890
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + D + GI G+ S + A+G L YL +
Sbjct: 224 FFAINKCKKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 265
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ GDS G+L + LNH VT
Sbjct: 266 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQ-GDSQGSLLSTLNHTVTKQ 322
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 323 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 380
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 381 NRSSGRD 387
>gi|447915546|ref|YP_007396114.1| DNA mismatch repair protein MutS [Pseudomonas poae RE*1-1-14]
gi|445199409|gb|AGE24618.1| DNA mismatch repair protein MutS [Pseudomonas poae RE*1-1-14]
Length = 863
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 160/641 (24%), Positives = 265/641 (41%), Gaps = 140/641 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLSGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + G+++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLGVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSS-----LGAILENTESR 795
N R + L + A QLQE ++ L L A ++ L A+LE
Sbjct: 359 --GLRNARPRDLARLRDALGALPQLQEAMTELDTPHLQQLAVTAGTYPDLAALLEK---- 412
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEA 854
AI+ +N II GGV YDS +++ +
Sbjct: 413 -------------AII---------------DNPPAIIRDGGVLKTGYDSELDELQSLSE 444
Query: 855 SLTKHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
+ + L ++ R L + + Y + Y +E+P S P DY+ R + KG
Sbjct: 445 NAGQFLIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAE 502
Query: 909 RYWTPNIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
R+ TP +K K L S+A + ++ +++L+ LI +
Sbjct: 503 RFITPELKEFEDKALSAKSRALAREKMLYEALLEDLISRLA 543
>gi|28871201|ref|NP_793820.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
str. DC3000]
gi|37999569|sp|Q87XW6.1|MUTS_PSESM RecName: Full=DNA mismatch repair protein MutS
gi|28854451|gb|AAO57515.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 855
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 150/633 (23%), Positives = 254/633 (40%), Gaps = 124/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 72 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 169 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 215 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 263 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 299 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 394 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 446
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 447 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 506
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFC 945
K L S+A + ++ +++L+ LIG
Sbjct: 507 EFEDKALSAKSRALAREKMLYETLLEDLIGHLA 539
>gi|399155414|ref|ZP_10755481.1| DNA mismatch repair protein MutS [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 926
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 190/452 (42%), Gaps = 108/452 (23%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
+Q+ K +H DK++F++MG FYE+F DA VGAK L + K P CG P +
Sbjct: 12 RQFNAIKREHPDKLLFYRMGDFYEMFGDDAIVGAKVLQIALTSRDKKKKKSLPMCGVPYK 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL GY+V + EQ E P K +G +V R++ VVT GT +L
Sbjct: 72 AYEQYLNKLTAAGYKVAICEQMEDPA------KAQG----LVARDVVRVVTPGTTVSPQL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ N + +L+A+ ++ +C GI VD++T + + + + L+
Sbjct: 122 IDPNRN-HFLLAINVVLRA-------QCLGIAFVDLSTGEFEVAEFHLN-ETHRFYDFLA 172
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA- 564
+L P EI +L +R+ + E+T LE + R+T
Sbjct: 173 QLTPQEI--------------LLTQSRS-------------EIESTFLE--ELVQRMTQL 203
Query: 565 -ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
+ +N AD+ S + GL +QV + G F F E
Sbjct: 204 LDKMNSADARSVTSSEQISGL---------------QNAQVFPSTGRFNFIDPYHFDPEA 248
Query: 624 LLRFA--KFELLPCSGFG--DM--------------------------AKKPY-----MV 648
R FE L SGFG D+ A + Y M+
Sbjct: 249 TQRNLNNHFETLNLSGFGVDDLPHGIAAAGALLRYLEETQKCDLSHLTALRRYAFDKTML 308
Query: 649 LDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDA 708
LD + NLE+FE S+SG TLY LNH T G RL R WL +PL + I ER D
Sbjct: 309 LDEATVANLELFE-SQSGARKHTLYHILNHTKTPMGARLFRQWLRQPLLDVEAINERFDC 367
Query: 709 VAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
+ R N EFR+ L + D+ R++ R+
Sbjct: 368 IEEFRN-NFMLCEEFRECLENIQDLPRIIGRI 398
>gi|157828277|ref|YP_001494519.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str.
'Sheila Smith']
gi|378722436|ref|YP_005287322.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str.
Arizona]
gi|379017581|ref|YP_005293816.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str. Hino]
gi|166232132|sp|A8GRI6.1|MUTS_RICRS RecName: Full=DNA mismatch repair protein MutS
gi|157800758|gb|ABV76011.1| DNA mismatch repair protein [Rickettsia rickettsii str. 'Sheila
Smith']
gi|376327460|gb|AFB24698.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str.
Arizona]
gi|376330147|gb|AFB27383.1| DNA mismatch repair protein MutS [Rickettsia rickettsii str. Hino]
Length = 886
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 135 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + D + GI G+ S + A+G L YL +
Sbjct: 220 FFAINKCKKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 261
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ GDS G+L + LNH VT
Sbjct: 262 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQ-GDSQGSLLSTLNHTVTKQ 318
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 319 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 376
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 377 NRSSGRD 383
>gi|422657792|ref|ZP_16720231.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331016401|gb|EGH96457.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 859
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 150/633 (23%), Positives = 254/633 (40%), Gaps = 124/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFC 945
K L S+A + ++ +++L+ LIG
Sbjct: 511 EFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|397904383|ref|ZP_10505299.1| DNA mismatch repair protein MutS [Caloramator australicus RC3]
gi|397162603|emb|CCJ32633.1| DNA mismatch repair protein MutS [Caloramator australicus RC3]
Length = 858
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/432 (26%), Positives = 195/432 (45%), Gaps = 81/432 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ E K +H D ++FF++G FYE+F DA + ++EL++ + P C
Sbjct: 3 LTPMMQQYLEIKEQHKDCILFFRLGDFYEMFFEDAEIASRELEIALTGRDCGLDKRAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + KL KGY+V + EQ E P + KG +VKREI ++T GT+
Sbjct: 63 GVPYHSAESYIAKLIEKGYKVAICEQVEDP------KLAKG----IVKREITRIITPGTI 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
EG +L+ + +Y++ + S G+ + DV+T + D + + L
Sbjct: 113 IEGSMLNEKAN-NYIICIYNSTSK---------LGLAICDVSTGDFFVTSF--DNEKNKL 160
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
LS+ P E++ I+ N +N+ + + IK YN
Sbjct: 161 IDELSKYAPSELL-------------IIEEKPNSTINEQLEI------------IKGRYN 195
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ ++ + K D+ IL + + +G +++SA TL +L
Sbjct: 196 CLISQ-IEKYDN---------------LDILDKFKTDNFNGEEIISA--ATLL----KYL 233
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+T K L + +M+LD+ +NLE+ E R+ GTL L+ +
Sbjct: 234 TDT----QKSSLGHITSIKKYNISDFMILDSFTRKNLELTETLRTRSKKGTLIDVLDKTL 289
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G RLLR W+ PL N I +R +AV N + + R+ L + D+ER+L+++
Sbjct: 290 TAMGGRLLRKWIEEPLMNIKEINKRLEAVEEFID-NIYISSDLREFLRNIYDIERILSKI 348
Query: 741 FASSEANGRNSN 752
S AN R+ N
Sbjct: 349 SCES-ANARDLN 359
>gi|339319886|ref|YP_004679581.1| DNA mismatch repair protein [Candidatus Midichloria mitochondrii
IricVA]
gi|338226011|gb|AEI88895.1| DNA mismatch repair protein [Candidatus Midichloria mitochondrii
IricVA]
Length = 818
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/418 (28%), Positives = 194/418 (46%), Gaps = 72/418 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQ-----PHCGFPER 385
+Q+ KS+H ++++F++MG FYELF DA + A LD+ K G+Q P CG P
Sbjct: 20 QQYLSIKSQHKEQLLFYRMGDFYELFFEDAIIAAPILDIALTKRGQQDGQNIPMCGVPFH 79
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++KL +KG+ V + EQ ETP++ +K S VV+RE+ ++T GTL E L
Sbjct: 80 AAEIYLQKLIKKGFSVAICEQLETPQE-----AKKRSYKAVVRREVVRIITPGTLMEDVL 134
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
LS + +YL A+T + A + V+++T + + + S + LLS
Sbjct: 135 LSPKSN-NYLAAITSFKDNIA---------VAWVEISTGEFSVSSINE----SAISALLS 180
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE-TTVLEIKNIYNRITA 564
L P E+I +L E R D + +S F + ++ ++K R A
Sbjct: 181 NLSPQEVIVDDMLLKDEQIR------------DTLSVSNFVTPKPHSLFDLK----RTQA 224
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
LN NS D T Q ++A G L Y++ +
Sbjct: 225 RLLNFFK---INSLTGFDHFT----------------QQEIAAAGCLLEYIQYT------ 259
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L S + + ++++DA ++LE+ +N+ G + +L L+ VTA G
Sbjct: 260 ---QKRSLPYLSKLKRINQDEFLLIDAKTRKHLEIEKNTL-GSKNNSLLEVLDKTVTATG 315
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
RLL L PL + I +R +AV N+ + RK +S PD+ER L+R+++
Sbjct: 316 GRLLSRQLNFPLIDEKTINQRLNAVEVFFN-NEELRVALRKIMSNFPDVERALSRIYS 372
>gi|213969151|ref|ZP_03397290.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
T1]
gi|301383954|ref|ZP_07232372.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
Max13]
gi|302064160|ref|ZP_07255701.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
K40]
gi|302134754|ref|ZP_07260744.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213926149|gb|EEB59705.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tomato
T1]
Length = 859
Score = 126 bits (316), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 150/633 (23%), Positives = 254/633 (40%), Gaps = 124/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKHRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFC 945
K L S+A + ++ +++L+ LIG
Sbjct: 511 EFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|331084834|ref|ZP_08333922.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410928|gb|EGG90350.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 885
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 159/614 (25%), Positives = 267/614 (43%), Gaps = 108/614 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
L+ +Q+ E K ++ D ++F+++G FYE+F DA +KEL++ ++ P
Sbjct: 6 TLTPMMQQYMETKKQYSDCILFYRLGDFYEMFFDDAITASKELEITLTGKNCGLEERAPM 65
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + + +L KGY+V + EQ E P+Q KG +VKRE+ VVT GT
Sbjct: 66 CGVPYHSVDSYLNRLVEKGYKVAICEQVEDPQQ------AKG----IVKREVVRVVTAGT 115
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS- 498
+ L + +Y+M + DR +G+ V DV+T + + LD
Sbjct: 116 NMNAQALDETKN-NYIMCIV--------YIADR-YGLAVADVSTGDYFVTE----LDSGR 161
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L + + P EII + + LRH ++ + + F+D E
Sbjct: 162 KLLDEIHKFSPSEIICNESFYMSGLDLDDLRHRLGMMIYSID--THFFDDEMCA------ 213
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
RI E + A EG GL GD V++A G L YL ++
Sbjct: 214 --RILKEHFHAA-------SLEGMGL-------------GDYNCGVIAA-GALLKYLYET 250
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K L + A YM+LD+ + NLE+ E R G+L L+
Sbjct: 251 ---------QKTSLSHITHITGYATGRYMLLDSSSRRNLELCETLREKQKRGSLLWVLDK 301
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERL 736
TA G R+LR+++ +PL + I +R +AV L + +++ E R+ LS + D+ERL
Sbjct: 302 TKTAMGARMLRSYIEQPLIDRHEIEQRLEAVEELKDKAISRE---EIREYLSPVYDLERL 358
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTES 794
++R+ S AN R+ ++ + ++ + ++ ++ +H EL+ Q C L +
Sbjct: 359 ISRVTYQS-ANPRD---LISFRNSLEMLPHIKYILTEMHE-ELLQQICEELDTL------ 407
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA 854
L+ +L SI++ A G II G D D D + E +
Sbjct: 408 EDLYQLLNE--------SIMEEPPLAM------KEGGIIKD-GYDADVDMLRQAKTEGKN 452
Query: 855 SLTKHLKEQRKLLG--DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L + +E+R+ G + + Y + Y LEV + + VP Y + + R+ T
Sbjct: 453 WLAQLEEEEREKTGIRNLKVKYNKVFG--YYLEVTNAYKELVPDYYTRKQTLANAERFIT 510
Query: 913 PNIKKLLGELSQAE 926
P +K+L + AE
Sbjct: 511 PRLKELEDTILGAE 524
>gi|222151137|ref|YP_002560291.1| DNA mismatch repair protein MutS [Macrococcus caseolyticus
JCSC5402]
gi|254766632|sp|B9EBI4.1|MUTS_MACCJ RecName: Full=DNA mismatch repair protein MutS
gi|222120260|dbj|BAH17595.1| DNA mismatch repair protein MutS [Macrococcus caseolyticus
JCSC5402]
Length = 846
Score = 126 bits (316), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 186/414 (44%), Gaps = 96/414 (23%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ----PHCGFPERNFS 388
Q+ + K ++ D ++FF++G FYE+F DA + AKEL++ + ++ P CG P +
Sbjct: 10 QYLQMKEQYKDCILFFRLGDFYEMFYEDAELTAKELEITLTRRDKKNNIPMCGVPHHSAK 69
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSA 448
+ +E+L KGY+V + EQ E P+Q+ KG +VKRE+ ++T GT+ + +++S
Sbjct: 70 VYIERLIEKGYKVAIAEQMEDPKQV------KG----MVKREVVKIITPGTVMD-DMISE 118
Query: 449 NPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
N +++Y+ AS + F + DV+T + + Q+ +D + LS +
Sbjct: 119 N-ESNYI----------ASIHHEEGFTLAYSDVSTGELKVTQLNED----EMLNELSSVN 163
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
P EII ++ L+N + ++ + ++
Sbjct: 164 PKEIITNIDL-------------NEVLINKI---------------------KMITDVIS 189
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
+ + N QA+G + P + L + + L+ + ++Y +
Sbjct: 190 RFEVNDTFKQADGVDQSLQPAVNLLLSYIQYTQMRALAHIDEAVYYEPVHY--------- 240
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
M LD A NLE+ E+ R + GTL + N C T G RL+
Sbjct: 241 ------------------MRLDMYAKRNLELTESIRHKNKKGTLLSIFNQCKTPMGNRLV 282
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARL 740
+ W+ RPL N I ER + G+ N F L + R+AL+ + D+ERL R+
Sbjct: 283 KEWIERPLLNRQEIEERHN---GVELFNDNFILRHQLREALTHVYDIERLAGRV 333
>gi|347842345|emb|CCD56917.1| similar to DNA mismatch repair protein msh3 [Botryotinia
fuckeliana]
Length = 1133
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 153/676 (22%), Positives = 264/676 (39%), Gaps = 102/676 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQP---HCGF-- 382
Q + K KHMD ++ ++G ++ F DA AK L + + G E P H +
Sbjct: 216 QVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESHLNYFA 275
Query: 383 ----PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L GY++ +V QTET +K +++ R++ V TKG
Sbjct: 276 SASIPVHRLPVHAKRLVAAGYKIGIVRQTETAAL----KKAGDNRNAPFVRKLTNVYTKG 331
Query: 439 TL--------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
T T P YL+ +TE+ GI V AT +I
Sbjct: 332 TYIDDIDGLDTTDAPSGGAPATGYLLCITETKAKGWGTDEKVEVGILAVQPATGDVIYDN 391
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDA 548
D L L + P E++ L+ T++ + L + + D + + +
Sbjct: 392 FEDGFMRGELETRLLHIAPCELLIVGE-LTKATDKLVQHLSGSSTNVFGDRIRVERVGKS 450
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+T E Y+R+ +K ++ +++ A L L +++ + + LSA+
Sbjct: 451 KTMAAES---YSRVAQFYADKLKAHQSSNNAREQEL------LEKVLKLTEPVTICLSAM 501
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ ++ + L E + K+ F + + +M+L+ L +LE++ N
Sbjct: 502 ---ITHMTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTSLEIYTNQTDYTQ 550
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRKAL 727
G+L+ L+ T FG+RLLR W+ RPL + + ER AV L+ N P + L
Sbjct: 551 KGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKVDKLNATL 610
Query: 728 SRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
+ D+ER L R++ Y + +L + +
Sbjct: 611 REVRSDLERSLLRIY---------------YGKCTRPELLTVLQTMQRI----------- 644
Query: 787 AILENTESRQLHHILTPGKG-------------LPAIVSILKHFKDAFDWVEANNSGR-- 831
+ + H+ TP LPAI I+ F D + A N +
Sbjct: 645 -------ANEFAHVKTPSDAGFESIALNEAVASLPAIGEIVISFLDKINAQAARNDDKYA 697
Query: 832 -IIPHGGVDMDYDSACKKVKEIEASLTKH-LKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ H + D C + +E L H + KL T +TYVTI YL+EVP +
Sbjct: 698 FFLEHYETEAIGDHKC-GIGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPNT 756
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
+VP + S K R+ TP + K L E Q + SA + + + H+
Sbjct: 757 DLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSEISTHYA 816
Query: 950 KWRQMVAATAGLTLIL 965
R ++ A L +L
Sbjct: 817 LIRDTISHLATLDCLL 832
>gi|350273361|ref|YP_004884674.1| DNA mismatch repair protein mutS [Rickettsia japonica YH]
gi|348592574|dbj|BAK96535.1| DNA mismatch repair protein mutS [Rickettsia japonica YH]
Length = 890
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 191/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKKTAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G++ S + A+G L YL +
Sbjct: 224 FFAINKCEKIILDFYKMKD----IKGI-------GETSSSQICAIGSVLEYL-------S 265
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 266 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHTVTKQ 322
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 323 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 380
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 381 NRSSGRD 387
>gi|325661608|ref|ZP_08150232.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472135|gb|EGC75349.1| DNA mismatch repair protein mutS [Lachnospiraceae bacterium
4_1_37FAA]
Length = 876
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 158/608 (25%), Positives = 265/608 (43%), Gaps = 108/608 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ E K ++ D ++F+++G FYE+F DA +KEL++ ++ P CG P
Sbjct: 3 QQYMETKKQYSDCILFYRLGDFYEMFFDDAITASKELEITLTGKNCGLEERAPMCGVPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L KGY+V + EQ E P+Q KG +VKRE+ VVT GT +
Sbjct: 63 SVDSYLNRLVEKGYKVAICEQVEDPQQ------AKG----IVKREVVRVVTAGTNMNAQA 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS-VLCCLL 504
L + +Y+M + DR +G+ V DV+T + + LD L +
Sbjct: 113 LDETKN-NYIMCIV--------YIADR-YGLAVADVSTGDYFVTE----LDSGRKLLDEI 158
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P EII + + LRH ++ + + F+D E RI
Sbjct: 159 HKFSPSEIICNESFYMSGLDLDDLRHRLGMMIYSID--THFFDDEMCA--------RILK 208
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E + A EG GL GD V++A G L YL ++
Sbjct: 209 EHFHAA-------SLEGMGL-------------GDYNCGVIAA-GALLKYLYET------ 241
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L + A YM+LD+ + NLE+ E R G+L L+ TA G
Sbjct: 242 ---QKTSLSHITHITGYATGRYMLLDSSSRRNLELCETLREKQKRGSLLWVLDKTKTAMG 298
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARLFA 742
R+LR+++ +PL + I +R +AV L + +++ E R+ LS + D+ERL++R+
Sbjct: 299 ARMLRSYIEQPLIDRHEIEQRLEAVEELKDKAISRE---EIREYLSPVYDLERLISRVTY 355
Query: 743 SSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
S AN R+ ++ + ++ + ++ ++ +H EL+ Q C L + L+ +
Sbjct: 356 QS-ANPRD---LISFRNSLEMLPHIKYILTEMHE-ELLQQICEELDTL------EDLYQL 404
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
L SI++ A G II G D D D + E + L +
Sbjct: 405 LNE--------SIMEEPPLAM------KEGGIIKD-GYDADVDMLRQAKTEGKNWLAQLE 449
Query: 861 KEQRKLLG--DTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+E+R+ G + + Y + Y LEV + + VP Y + + R+ TP +K+L
Sbjct: 450 EEEREKTGIRNLKVKYNKVFG--YYLEVTNAYKELVPDYYTRKQTLANAERFITPRLKEL 507
Query: 919 LGELSQAE 926
+ AE
Sbjct: 508 EDTILGAE 515
>gi|194220748|ref|XP_001498011.2| PREDICTED: DNA mismatch repair protein Msh6-like [Equus caballus]
Length = 983
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 80/120 (66%), Gaps = 3/120 (2%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
+D TLY+P DFL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L
Sbjct: 373 FDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLV 432
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG---SKDKVVK 428
+MKG H GFPE F + L +KGY+V VEQTETPE +E R ++ D+VV+
Sbjct: 433 FMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPEMMEARCRKMAHISKHDRVVR 492
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 106/184 (57%), Gaps = 6/184 (3%)
Query: 788 ILENTESRQLHHILT-----PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
++++ +S+ L ++T P P + L + AFD +A +G I P G D DY
Sbjct: 500 VVDDFKSKILKQVITLQTKNPEGRFPDLTIELNRWDTAFDHEKARRTGLITPKAGFDSDY 559
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELR 901
D A ++E E SL ++L++QR +G +I Y IG++ Y LE+PE+ + ++P +YEL+
Sbjct: 560 DQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELK 619
Query: 902 SSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
S+KKG RYWT I+K L L AE ++ +LK ++RL F +++ W+ V A L
Sbjct: 620 STKKGCKRYWTKTIEKKLANLINAEERRDVSLKDCMRRLFYNFDKNYKDWQAAVECIAVL 679
Query: 962 TLIL 965
++L
Sbjct: 680 DVLL 683
>gi|403217557|emb|CCK72051.1| hypothetical protein KNAG_0I02660 [Kazachstania naganishii CBS
8797]
Length = 1051
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 159/676 (23%), Positives = 278/676 (41%), Gaps = 141/676 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPH------ 379
+Q K ++MDK++ ++G Y+ F DA + + L ++ ++G+ PH
Sbjct: 165 EQVRSLKLQNMDKILLVRVGYKYKCFAEDAIIVSSILHIKLVQGKLTLDNSNPHDSQYKN 224
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
C FP+ ++N+E+L + +V +VEQ+ET L+++ + V +RE+ VV+
Sbjct: 225 FAYCSFPDVRLNINLERLIHENLKVGIVEQSETSS---LKKQSENKSKSVFEREVTNVVS 281
Query: 437 KGTLTEGELLSANPDASYLMALTES----NQSPASQSTDRCFGICVVDVATSRIILGQVM 492
K T + + S ++ T+S P S+ + + + V++ + +I +
Sbjct: 282 KATYGINVDKARSSKESPILGDTKSIWILKVVPTSEQLSK-YSLVSVNLNSGEVIFDEFS 340
Query: 493 DDLDCS-VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
D S L + L P+E+I +E+ + R +N AE
Sbjct: 341 DTASSSEQLITRVKYLDPIEVILQC------SEKHVNRCLKN--------------AECQ 380
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ EIK NR ++ N+ +V +P L EL++
Sbjct: 381 ITEIKEEDNR-HLDAFNELKVDVP-----------VPETLKELVAH-------------- 414
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L++ + +E +L L + K +M+LD A++ L++F N G+
Sbjct: 415 LYHYLHQYNNENIL-------LITDNYRPFTSKMFMLLDGNAMDALDIFSNE---GKKGS 464
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGV-NQPFALEFRKALSRL 730
L+ LNH T FG R LR W+ RPL N+ I +R DA+ + V N F L +
Sbjct: 465 LFWVLNHTRTPFGSRQLRNWVKRPLLNTTDIEDRLDAIECISEVINDIFFESLNHLLKSI 524
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
PD+ L R+ GR S + V Y F+ + C L+D +
Sbjct: 525 PDLSHTLNRI-----TYGRTSRREVYY----------FLKQI--CSLIDH--------FK 559
Query: 791 NTESRQLHHILTPGKGLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDM--------- 840
+S + IL P +P +L K F++ +++++ +N RI+ V
Sbjct: 560 LHQSYIENQILLPDGKIPKRSKLLPKWFQEMYEYLKDSNIPRILTMVNVAAVMEKDPEKQ 619
Query: 841 --------DYDSACK------KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLL 884
+YD+ K ++ I+ + L RK L + Y +D YL+
Sbjct: 620 QIGFLNLNNYDNPAKIIDIQRNIESIQDEMNVELNNIRKFLKRPYLNY----RDEVDYLI 675
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE----SEKESALKSILQRL 940
EV S +P D+ +S K R+ TP KLL L + E S LQ++
Sbjct: 676 EVRNSQVKGLPDDWVKVNSTKSVSRFLTPKNTKLLQNLQYQKDLLLQETRSEFLVFLQKI 735
Query: 941 IGQFCEHHNKWRQMVA 956
++ NK Q +A
Sbjct: 736 KAEYTS-LNKLIQKIA 750
>gi|347727130|gb|AEP19923.1| DNA mismatch repair protein [Exiguobacterium sp. N39]
Length = 841
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 183/430 (42%), Gaps = 105/430 (24%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQP--HCGFPE 384
KQ++ K+ + D +F+++G FYELF DA + AKEL+L E P CG P
Sbjct: 11 KQYFSIKADYPDAFLFYRLGDFYELFFEDAQIVAKELELTLTAKNGKNAEHPIPMCGVPH 70
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ ++ +E+L KG+ V + EQ E P + KG +VKRE+ V+T GT
Sbjct: 71 HSAAIYIEQLIEKGFNVAICEQMEDP------KATKG----LVKREVIQVITPGT----- 115
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATSRIILGQVMDDLDCSVLCC 502
Y+ AL E + FGI DV T L + L
Sbjct: 116 ---------YMAALGEKENRYLLSVVNVAGRFGIARGDVTTGESWL---------TTLPS 157
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ LR VE + P+ ++ + E A + L + +PLS +
Sbjct: 158 REAVLREVEGLVPSEIIVDDAELA------DHLSSLGIPLS------------------V 193
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
E L + S+ A +A+ L L+ +K LD
Sbjct: 194 QTERLASSLSSGARDEAQVSAFELLFAYLTRT---------------------QKRALDH 232
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
L P + + +M LDA NLE+F ++RSG+ G+L A L+ TA
Sbjct: 233 ---------LQPAVAY---EVEAHMQLDANTARNLELFRSARSGERKGSLLALLDETTTA 280
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARL 740
G RLL+ WL +PLY IR+RQDAV L F L + R+ L + D+ERL+A++
Sbjct: 281 MGGRLLKRWLEQPLYTEQAIRDRQDAVENL---VDDFMLRDQLREQLRHVYDIERLVAKV 337
Query: 741 FASSEANGRN 750
AN R+
Sbjct: 338 -GYGTANARD 346
>gi|160933107|ref|ZP_02080496.1| hypothetical protein CLOLEP_01950 [Clostridium leptum DSM 753]
gi|156868181|gb|EDO61553.1| DNA mismatch repair protein MutS [Clostridium leptum DSM 753]
Length = 873
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 163/631 (25%), Positives = 258/631 (40%), Gaps = 136/631 (21%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ LS +Q+ + K+++ ++FF++G FYE+F DA + +KEL+L +
Sbjct: 1 MAELSPMMQQYQKIKAENQGAILFFRLGDFYEMFFDDAVLASKELELTLTARDCGQNKKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + +L KGY+V + EQ E P KG +VKR+I VVT
Sbjct: 61 PMCGVPYHSSESYIARLISKGYKVAICEQMEDPAL------AKG----LVKRDIIRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ EG +L + +++ ++ GIC D++T + + DL+
Sbjct: 111 GTVLEGSMLDEGKN-NFICSIYAIGDHA---------GICFCDISTGELYSTSLDKDLEN 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+L N L + R IL + L P
Sbjct: 161 EIL----------------NELGRFSPREILIGGETVNMKKLAPF--------------- 189
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSE-----LISTGDSGS-QVLSALGGT 611
I ++++A + D AE + TC +L + L G G Q +SALG
Sbjct: 190 IRDKLSACVEMRED-------AEFELETCRRTVLEQFKKETLDDLGMEGQDQAVSALGAL 242
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L YLK + + L+ + E + + +M +D NLE+ E R+ + G+
Sbjct: 243 LNYLKDT-QRKVPLKINRIE--------NYTQAQFMGIDLNTRRNLELLETMRNKEKRGS 293
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRL 730
L L+ TA GKRLLRTW+ +PL + G I RQ+AV L PF L+ +
Sbjct: 294 LLWVLDQTKTAMGKRLLRTWIEQPLLSCGKIIRRQNAVEEL--YCDPFLCGNLADQLTGV 351
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D++RL+ R+ + ANGR +SA G L +LE
Sbjct: 352 FDLQRLITRIVYGT-ANGRELRS---------------LSATIGL------LPELKKMLE 389
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEAN---------NSGRIIPHGGVDMD 841
N +S L I L +D D +E + G II G + +
Sbjct: 390 NRKSELLQSIYED----------LDTLEDVHDLIEGSIVDDPPFSVREGGIIRE-GYNQE 438
Query: 842 YDSACKKV---KEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVP 895
D K + K+ A++ K +E+ T I + +G + Y LEV S + VP
Sbjct: 439 VDELRKDMTGGKDYVAAIEKREREK------TGIPKLRVGYNRVFGYYLEVTNSYKDQVP 492
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
Y + + RY T +K L G + A+
Sbjct: 493 DSYIRKQTLTNCERYVTQELKDLEGRILGAK 523
>gi|88607128|ref|YP_505434.1| DNA mismatch repair protein MutS [Anaplasma phagocytophilum HZ]
gi|123494801|sp|Q2GJL7.1|MUTS_ANAPZ RecName: Full=DNA mismatch repair protein MutS
gi|88598191|gb|ABD43661.1| DNA mismatch repair protein MutS [Anaplasma phagocytophilum HZ]
Length = 820
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 191/413 (46%), Gaps = 69/413 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQPHCGFPERNFSM 389
+Q+ K ++ + ++ +++G FYELF DA + +K L++ K + P CG P +
Sbjct: 12 RQYRALKEQYGECLLLYRLGDFYELFFEDAVIASKTLNIVLTKRGTDTPMCGVPYHSSES 71
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ +L + GY+V V EQ ET E+ K S +V+RE+ +VT GTL E LL A
Sbjct: 72 YIGRLVKSGYKVAVCEQIETAEE-----ARKRSVRALVRREVTRIVTPGTLVEDSLLDAK 126
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI-ILGQVMDDLDCSVLCCLLSELR 508
+ +YL ++ + +G+ ++++T + ++DLD + L
Sbjct: 127 EN-NYLACISNIGER---------YGVAWMELSTGLFHVRASKLEDLDSEI-----QRLG 171
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
P E++ + ++ +L+ R + + F+D++ + +Y
Sbjct: 172 PSELLISDKLKEQQSMELVLKRHRCAITSHN---ESFFDSKRAEKVLCGVY--------- 219
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
G+T + G+ GD +SA G L Y+ R
Sbjct: 220 --------------GVTTVQGL-------GDFEEVEVSACGSLLEYV----------RMT 248
Query: 629 KFELLPCSGFGDMA-KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
+ LP + + ++++D PAL NLE+F +++SG+ G+L + ++H VTA G R+
Sbjct: 249 QRGSLPKLSYPKVRDSNSFVLIDGPALRNLELF-STQSGEKKGSLISTIDHTVTAMGSRM 307
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
L+ +LA P+ +I RQDAV N+ R ++ PD+ER+L R+
Sbjct: 308 LKRYLAFPVACHNVINGRQDAVEFFVS-NRSLCEVIRGVINGFPDIERILTRV 359
>gi|312143591|ref|YP_003995037.1| DNA mismatch repair protein MutS [Halanaerobium hydrogeniformans]
gi|311904242|gb|ADQ14683.1| DNA mismatch repair protein MutS [Halanaerobium hydrogeniformans]
Length = 868
Score = 125 bits (315), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 165/678 (24%), Positives = 277/678 (40%), Gaps = 122/678 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHC 380
L+ +Q++ K KH D ++FF++G FYE+F DA A+ LD+ GE+
Sbjct: 4 LTPMMQQYYNLKRKHQDAILFFRLGDFYEMFGEDAKKAARLLDIALTSRNKGGGEKIDMA 63
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +EKL +KG +V + EQ E P + +V+R++ V+T GT+
Sbjct: 64 GVPAHSAASYIEKLIKKGIKVAICEQLEDPSE----------ASGIVERDVIRVITPGTV 113
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E E+L+ N E+N A+ +G D++T L +
Sbjct: 114 IENEILADN----------ENNYLAAAFKYQSNYGFAYTDISTGEFYLTE----FSAEAA 159
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L E+ I P +L+ E + + +N L F ET K +N
Sbjct: 160 DKLSDEINR---IAPQELLTDENTAKMDK------INQLQAQYGFTINETE----KKDFN 206
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ E L+ + N L G E + T + A G L YLK++
Sbjct: 207 YLKEEMLSHFNIN------------SLEGFGCEDMETA------VYAAGQILAYLKQT-- 246
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K + + + YMVLDA NLE+ + R +SG+L + ++ +
Sbjct: 247 -------QKRTVKQITTLHPYYLEDYMVLDAATRRNLELTKTIRDNKTSGSLLSIVDQTI 299
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T+ G R ++ W+ +PL N I +R D++ L N + R ++ + D+ER+++++
Sbjct: 300 TSMGGRTIKKWINQPLINQKEIVKRHDSIEELLD-NFRILNKCRDLMADIYDLERIMSKI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
S ANGR+ + L AK E + A EL +
Sbjct: 359 TYQS-ANGRDL--IALRNSLAKLPGLEKLIADFKTELFSEIQD----------------- 398
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHL 860
G ++ I K D+ + I GG+ D+ KK+ E+ SL
Sbjct: 399 -----GFDSLEDIFKLIDDSI----IDEPPTTITEGGIIK--DNYNKKLDELR-SLANQG 446
Query: 861 KE-----QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
K+ Q++ T I + +G + Y LEV S VP YE + + RY
Sbjct: 447 KDWISALQKEEREKTGINTLKVGFNKVFGYYLEVTNSHLDKVPERYERKQTLSNSERYII 506
Query: 913 PNIKKLLGELSQAE---SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGS 969
P +K+ E+ AE ++ E L ++ I Q + NK ++A +D
Sbjct: 507 PKLKEKEAEVLGAEEKINDLEYKLFVEIRDEIAQEVDRINKTASLIAE--------IDVL 558
Query: 970 LLHAFLILQSNSCSSEMN 987
+ AFL +++N E+N
Sbjct: 559 MSFAFLAIENNYNRPEIN 576
>gi|229586554|ref|YP_002845055.1| DNA mismatch repair protein MutS [Rickettsia africae ESF-5]
gi|259511174|sp|C3PN02.1|MUTS_RICAE RecName: Full=DNA mismatch repair protein MutS
gi|228021604|gb|ACP53312.1| DNA mismatch repair protein MutS [Rickettsia africae ESF-5]
Length = 890
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 191/431 (44%), Gaps = 77/431 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEANYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L ++ Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNLRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL----KKSF 619
++NK + + + D + GI G+ S + A+G L YL K++
Sbjct: 224 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYLSLTQKQNI 272
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ R KF YM +D NLE+ NS+ G S G+L + LNH
Sbjct: 273 PHLPIPRIIKFH-------------SYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHT 318
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G RLL +L+ PL N I R + N + R+ L + D+ER L R
Sbjct: 319 VTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTR 377
Query: 740 LFASSEANGRN 750
+ + ++GR+
Sbjct: 378 I-TMNRSSGRD 387
>gi|405123082|gb|AFR97847.1| DNA mismatch repair protein Msh3 [Cryptococcus neoformans var.
grubii H99]
Length = 1169
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 156/670 (23%), Positives = 261/670 (38%), Gaps = 110/670 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMN 390
+KQ+ E K ++ D ++ ++G Y+ DA ++EL
Sbjct: 244 EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASREL---------------------G 282
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL---- 446
+ L GY+V V+ QTET +K +++ R++ + T T E L
Sbjct: 283 IVALLSLGYKVGVITQTETAAL----KKIGDNRNAPFTRKLTHLFTAATYVEDPSLSSSS 338
Query: 447 --------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
+A P + L+A+ E AS + +CVV T I +
Sbjct: 339 SSSSAHFDDPVIPGTAPPPTNALVAIMEQPVDRASDDRVKVGLVCVVP-GTGDITWDEFD 397
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN----------DLVP- 541
D + L L+ L P E++ P LS TE+ + P D +P
Sbjct: 398 DSQIRAELETRLAHLSPAELLLPKQKLSKATEKVLAYFAGEPKYQGRNAVRIERIDDIPE 457
Query: 542 -------LSEFWDAE----TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLT----- 585
L+ F+ + TT +N + E + SQ E D L
Sbjct: 458 YDAAFDFLTNFYHDKGYKATTSKRDENDEQHLMIEGNKQRSLQPKLSQDEADTLLDDEIY 517
Query: 586 CLPGILSE--LISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAK 643
G+ S +++ D QV+ ++ + Y+K+ L+ S F A
Sbjct: 518 LASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFRH--------TSSFVRFAN 569
Query: 644 KPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIR 703
+ +M+L + L NLE+++N G G+L L+HC T GKRLLR W+ RPL + ++
Sbjct: 570 RSHMLLSSNTLANLEIYQNQTDGGLYGSLMWLLDHCKTRMGKRLLREWVGRPLLDVAALK 629
Query: 704 ERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKK 763
R DA+ + N + R L +PD+ R L R V Y A
Sbjct: 630 ARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR---------------VQYGKATPN 674
Query: 764 QLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDW 823
+L + L L + ++G + + H + LP I+ + F +A +
Sbjct: 675 ELATLLITL--VRLASEFKPNMGNVFRS------HLLNNIPNTLPTILDTSQRFLNALNL 726
Query: 824 VEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGK 879
+A N+ + P D+ C V E+E L +HL E RK+L ++ Y+T+
Sbjct: 727 KQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKILKKPTLKYITVSG 784
Query: 880 DLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
YL+EVP VP + S+ + RY TP I + E +Q + + +
Sbjct: 785 IEYLVEVPIRDMKIVPAQWVKISATRTVNRYHTPEILTITKERTQHQEKLSIVAREAFAA 844
Query: 940 LIGQFCEHHN 949
+ E+H+
Sbjct: 845 FQSEVAEYHD 854
>gi|254566783|ref|XP_002490502.1| Mismatch repair protein [Komagataella pastoris GS115]
gi|238030298|emb|CAY68221.1| Mismatch repair protein [Komagataella pastoris GS115]
gi|328350893|emb|CCA37293.1| DNA mismatch repair protein mutS [Komagataella pastoris CBS 7435]
Length = 1004
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 170/695 (24%), Positives = 290/695 (41%), Gaps = 99/695 (14%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------- 376
NL+ ++Q+ K+ H DK++ ++G Y+ F DA V + LD+ ++ G+
Sbjct: 97 NLTPLEQQFISLKANHKDKILAIQVGYKYKFFGEDAKVASGILDIMFIPGKVSLDPNNSE 156
Query: 377 ------QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
+C P+ +++++L KG +V VV+Q ET + +K + +R+
Sbjct: 157 ETDYDRYAYCSVPDTRLHIHLKRLLNKGLKVGVVKQMETAAI----KSNSANKSTLFERK 212
Query: 431 ICAVVTKGTL---TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+ V T T T + L +N S++ ++ E + V++ S I+
Sbjct: 213 LTNVYTSATYIDDTNEQDLESNKAGSFIFSICEKKNR---------LSVMAVNLINSEIV 263
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D + L L L P E + LS ETE+ I S F
Sbjct: 264 YDSFEDTQIRTNLRTRLQYLDPAEYVTIGE-LSKETEQCI---------------SSFIM 307
Query: 548 AETT---VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
++ + I+ I ++ A+ L+K V+ S D +L E I+ S Q+
Sbjct: 308 EKSIGRNSMTIRRIPYQLDAQYLDKLTEFVSASSNPVDS-----ALLLEFITELPSHLQM 362
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
+ G + YL + L L + F D K YM+LD+ L+++E+ N+
Sbjct: 363 CTY--GLVEYLTEFGLSSVFLLKRNYH-----RFSDSNK--YMILDSNTLKSIEILNNNT 413
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFR 724
+G+ G+L L+H T FG RLLR W+ +PL + I R A+ L +L F+
Sbjct: 414 NGEEVGSLLWLLDHTRTKFGYRLLRKWITKPLIDREQILNRSAAIRDL-------SLHFK 466
Query: 725 KA--------LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE 776
LS D+ER L+R++ G+ + K + ++ F+ E
Sbjct: 467 SILVEKLCFFLSNTNDLERSLSRVYF-----GKTTRKEMYLVLKKFNEILAFMQNYSKAE 521
Query: 777 LMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG 836
+ DQ L + L E LH + T L + + L A E++ + +
Sbjct: 522 I-DQL--QLESSLLREEFLTLHQLATS--ELKSFTAYLGMINSAAAMDESDEKTHVTNYF 576
Query: 837 GVD-MDYDSAC---KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
D DYD +KV+E+E L K L R++L S+ Y++ K+ YL+EV S
Sbjct: 577 SSDFFDYDKIAVEKRKVQELETLLEKELINIRQILKRPSMEYISNNKEPYLIEVRNSTVK 636
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
S+P+++ + K R+ TP KL +L E A +S +
Sbjct: 637 SLPKNWIKINGTKTVSRFRTPETTKLYKQLQYLEDLVVIANESCFSSFLHSIKSQRPYLS 696
Query: 953 QMVAATAGL-TLILLDGSLLHAFLILQSNSCSSEM 986
++V+A A L LI L S + N+C E+
Sbjct: 697 RVVSALATLDCLISLTASSFNGV-----NNCQPEL 726
>gi|418016939|ref|ZP_12656498.1| DNA mismatch repair protein MutS [Streptococcus salivarius M18]
gi|345527632|gb|EGX30940.1| DNA mismatch repair protein MutS [Streptococcus salivarius M18]
Length = 852
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 164/678 (24%), Positives = 278/678 (41%), Gaps = 148/678 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ ++ FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKAGSR---------FGLAYMDVSTGEFFATE-LDDF--S 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ ++ PE + +L N L++ ET V + ++
Sbjct: 160 SVCSEIQNLKAREVVLGYDL--PEADEQVLVKQLNLLLS----------KETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQAAIMERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + AILE
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFNDEALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGS 969
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVD------- 540
Query: 970 LLHAFLILQSNSCSSEMN 987
+LQS + ++E N
Sbjct: 541 ------VLQSLAVTAETN 552
>gi|312898809|ref|ZP_07758197.1| DNA mismatch repair protein MutS [Megasphaera micronuciformis
F0359]
gi|310619971|gb|EFQ03543.1| DNA mismatch repair protein MutS [Megasphaera micronuciformis
F0359]
Length = 856
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 171/415 (41%), Gaps = 73/415 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHCGFPER 385
KQ+ E K DK++FF++G FYELF DA ++ELDL K P CG P
Sbjct: 3 KQYLEVKETCADKLLFFRLGDFYELFFDDALTASRELDLTLTGRAGGNKERVPMCGVPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +E+L KGY+V + EQ E P+ + KG +VKREI V+T GT+T E
Sbjct: 63 SADTYIERLVHKGYKVAICEQMEDPKSV------KG----LVKREIIRVITPGTVTM-EH 111
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
A+ +Y+ A+ E N + + DV T + DD L + +
Sbjct: 112 AVASKKNNYIAAVGEENGG---------IQLVLTDVTTGEALWMACGDDETQDRLLDIFA 162
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
P E++ E AI+ R R T E
Sbjct: 163 LYEPAEVVYTK-------ESAIITSLR----------------------------RFTTE 187
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
LN + Q + D E + + +G L Y+K++
Sbjct: 188 RLNHCAFTLYELQGDIDYSRTGADYFDE--DAFQAAKEAAYTIGILLSYVKET------- 238
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K ++ + + + M++D +L +LE+ +N R G GTL L+ TA G
Sbjct: 239 --VKADVFHIASLRPLTTERNMLIDVSSLRHLEITQNVRDGRRKGTLLDVLDRTKTAMGG 296
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
RLLR WL PL N I ERQD V L ++ + L ++ D ER+L R+
Sbjct: 297 RLLRKWLEAPLLNLHDITERQDGVEDLVR-HEIMRQDLGDTLDKIYDFERILTRI 350
>gi|347727068|gb|AEP19892.1| DNA mismatch repair protein [Exiguobacterium sp. 11-28]
Length = 841
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 181/430 (42%), Gaps = 105/430 (24%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQ-----PHCGFPE 384
KQ++ K+ + D +F+++G FYELF DA + AKEL+L G+ P CG P
Sbjct: 11 KQYFSIKADYPDAFLFYRLGDFYELFFEDAKIVAKELELTLTAKNGKNAEHPIPMCGVPH 70
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ ++ +E+L KG+ V + EQ E P + KG +VKRE+ V+T GT
Sbjct: 71 HSAAIYIEQLIEKGFNVAICEQMEDP------KATKG----LVKREVIQVITPGT----- 115
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRC--FGICVVDVATSRIILGQVMDDLDCSVLCC 502
Y+ AL E + FGI DV T L + S
Sbjct: 116 ---------YMAALGEKENRYLLSVVNVAGRFGIARGDVTTGESWLTTLSSQEAVS---- 162
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
R VE + P+ ++ + E LR PL +PLS +
Sbjct: 163 -----REVEGLAPSEIIVADDE---LRQQLAPLG---IPLS------------------V 193
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
E L S+ A +A+ L L+ +K LD
Sbjct: 194 QTERLASPLSSGAKDEAQVSAFELLFAYLTRT---------------------QKRALDH 232
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
L P + + +M LDA NLE+F ++RSG+ G+L A L+ TA
Sbjct: 233 ---------LQPAVAY---EVEAHMQLDANTARNLELFRSARSGERKGSLLALLDETTTA 280
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARL 740
G RLL+ WL +PLY IR+RQDAV L F L + R+ L + D+ERL+A++
Sbjct: 281 MGGRLLKRWLEQPLYTEQAIRDRQDAVENL---VDDFMLRDQLREQLRHVYDIERLVAKV 337
Query: 741 FASSEANGRN 750
AN R+
Sbjct: 338 -GYGTANARD 346
>gi|358377989|gb|EHK15672.1| hypothetical protein TRIVIDRAFT_56280 [Trichoderma virens Gv29-8]
Length = 1095
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 146/659 (22%), Positives = 275/659 (41%), Gaps = 74/659 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KH+D ++ ++G + F DA V AKEL + + G E P
Sbjct: 199 QFLDIKRKHLDTILIVEVGYKFRFFGEDARVAAKELGIVCIPGKMRYDEHPSEAHLDRFA 258
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L G++V VV Q ET +K +++ R++ + TKG
Sbjct: 259 SASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRKLTNLYTKG 314
Query: 439 TLTE--GELLS---ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T + GEL S + P YL+ +TE+ + + G+ V AT II D
Sbjct: 315 TYIDENGELDSQDSSTPSGGYLLCITETATKGSGTDENVNVGVLAVQPATGDIIYDTFED 374
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAETT 551
S + L + P E + + L+ T++ I L + + D + ++T
Sbjct: 375 GFMRSEIETRLLHISPCEFLIVGD-LTKGTDKLIQHLSGSSTNVFGDRSRVERVPKSKTM 433
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
E + + A+ + +A N S +L +++ ++ + LSA+
Sbjct: 434 AAEAYSHVTQFYADQVKEASDNETAS-----------ALLDKVLKLPEAITICLSAM--- 479
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +L++ L E + K+ F + + +M+++ LE+LEV+ NS G+
Sbjct: 480 ITHLQEYGL-EHIFGLTKY-------FQSFSTRSHMLINGTTLESLEVYRNSTDHSQKGS 531
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L+ ++ +T FG+RLLR W+ RPL + + ER AV L +++ S +
Sbjct: 532 LFWAVDKTLTRFGQRLLRKWVGRPLLDRERLDERLAAVQELLD---------KQSTSPVD 582
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERLL +++A+ S + Y + +L +S L + + SS+ + +
Sbjct: 583 DLERLL----TTTKADLERSLIRIYYGKCTRPEL---LSVLQTLQKIASHYSSVKSASDV 635
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--- 848
L I+ LP I+ + + D + A + +G ++ + +
Sbjct: 636 GFDSPL--IVNAITTLPQILDSVISYLDRINLYAAKKDDK---YGFFREEFHTEEIQDHQ 690
Query: 849 --VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ +E L +H + ++ YVT+ YL+ VP +VP + S K
Sbjct: 691 LGIAHVEHELDEHRAVAAGKIKQKTVEYVTVAGIEYLIAVPNKDIKNVPASWSKISGTKA 750
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ TP + +L+ E Q +A + + + R ++A A L +L
Sbjct: 751 LSRFHTPEVIRLINERDQHREALAAACDKAFKDFLATIASEYQPLRDAISALATLDCLL 809
>gi|189193719|ref|XP_001933198.1| DNA mismatch repair protein MSH3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978762|gb|EDU45388.1| DNA mismatch repair protein MSH3 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1133
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 155/663 (23%), Positives = 275/663 (41%), Gaps = 90/663 (13%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KH+D V+ ++G Y+ F DA +KEL + + G E P
Sbjct: 232 QYLDIKRKHLDTVVIVEVGYKYKFFGEDARTASKELGIVCIPGKFRYDEHPSEAHLDRFA 291
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVVTK 437
FP ++V++L + ++V VV Q ET K G+ ++ R++ + TK
Sbjct: 292 SASFPTHRLQVHVKRLIQANHKVGVVRQVETAA-----LKAAGTNRNTPFVRKLTNLYTK 346
Query: 438 GTLT---EG-ELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
GT EG E +A A YL+ +TESN G+ V AT II
Sbjct: 347 GTYVDDIEGLETPTAGSGAGAQSTGYLLCITESNAKGWGTDEKVQVGLIAVQPATGDIIY 406
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFW 546
D S + L + P E + + LS T++ I L ++ + D +
Sbjct: 407 DDFEDGFLRSEIETRLLHIAPAEFLVVGD-LSKATDKLIQHLSASKTNVFGDRSRVERVE 465
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+T + + + A + + N ++ Q IL ++ + + LS
Sbjct: 466 KPKTMAAQAYSHISNFYAGKMKSSQENDSDKQG---------AILDKVHQLSEHVTICLS 516
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
A+ + YL + L E + K+ F + + YM+L+ L +LE+++N
Sbjct: 517 AM---ITYLSEYGL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDF 565
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRK 725
S G+L+ +N T FG+RLLR W+ RPL + + ER AV L+ G N + +
Sbjct: 566 TSKGSLFWTMNRTKTRFGQRLLRKWVGRPLIDKSKLEERIAAVEELKEGENTIPVDKLKF 625
Query: 726 ALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSS 784
L ++ D+E++L R++ Y+ + +L L + + +
Sbjct: 626 MLGKIKTDLEKVLIRIY---------------YKKCTRPEL------LAALQTLQEISGE 664
Query: 785 LGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRII----PHGGVD 839
++ ES +L+ +P I L F + + A + + H D
Sbjct: 665 YLSVKTPEESGFTSTLLSESVSNVPKIYDDLNSFLEKINARAAKDDDKYSFFREEHEAED 724
Query: 840 M-DYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLRGSV 894
+ D+ + + +E L H K+ LG + + YVT+ YL+EV PE + V
Sbjct: 725 INDFKLS---IASVEDDLNTHRKDAAAKLGKSKVDYVTVAGIEYLIEVKRKAPEEKK--V 779
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P ++ S+ K R+ TP +K++L E Q + +A + L+ + + R
Sbjct: 780 PASWQQISATKTTLRFHTPEVKRMLQERDQYKESLAAACDKAYKDLLEDISSKYQQLRDC 839
Query: 955 VAA 957
V++
Sbjct: 840 VSS 842
>gi|422654858|ref|ZP_16717586.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330967907|gb|EGH68167.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 859
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 150/633 (23%), Positives = 253/633 (39%), Gaps = 124/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMNDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFC 945
K L S+A + ++ +++L+ LIG
Sbjct: 511 EFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|313114064|ref|ZP_07799616.1| DNA mismatch repair protein MutS [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310623473|gb|EFQ06876.1| DNA mismatch repair protein MutS [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 871
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 148/616 (24%), Positives = 249/616 (40%), Gaps = 121/616 (19%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ LS +Q+ E K +H D+++F+++G FYE+F DA +KELDL M+
Sbjct: 1 MAELSPMMQQYLEIKKQHKDEILFYRIGDFYEMFFDDALTASKELDLTLTGKQCGMEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P ++ V +L KGY+V + EQ E P K KG +VKR+I VVT
Sbjct: 61 PMCGVPFHSYEGYVARLIAKGYKVAICEQVEDPA------KAKG----LVKRDIIRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ E +L + + +Y+ ++ + G+C DV+T + ++ D
Sbjct: 111 GTVIESSMLQDDRN-NYIASIFLKGKKA---------GLCFADVSTGTAHITELNADKIA 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ L P E++ +L A ++ V +L+ + T ++N
Sbjct: 161 PAVITELCRYHPSEVLMNPGLLDCREVTAYIKKNMTCSV-ELIEEERYAPGLVTA-SLEN 218
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLT--CLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ R A++ A DGL + +L L T G + L
Sbjct: 219 QFGRDWAQTTGIA----------ADGLVRFAMAALLEYLHDTQIKGVERL---------- 258
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+T++ + K + +M L NLE+ E R + GTL
Sbjct: 259 ------KTVITYNKAQ--------------FMRLSPVTRANLELTETLRGREKRGTLLWV 298
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDME 734
L+ T+ GKR+LR+W+ +PL +S LI R +AV L V Q A + + L + DME
Sbjct: 299 LDKTSTSMGKRMLRSWIEQPLISSALINHRLNAVESL--VKQTMARGDLTEELGYIADME 356
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL+ R +Y A K++ + Q C L + E+
Sbjct: 357 RLMTR---------------AVYGSATPKEIYT----------LAQTCDRLPGLRRQAEA 391
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPH--------GGVDMDYDSAC 846
G P + + D + ++A + P G + Y +
Sbjct: 392 ----------CGCPELAELAVQI-DPLEDIKARIYAAVDPEAPSTLKDGGVIAKGYHAEV 440
Query: 847 KKVKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRS 902
+++ I + L + + +L +T I + IG + Y +EV S + VP Y +
Sbjct: 441 DELRSIRDNTKGVLAQLEARLRQETGIPKLKIGYNHVFGYFIEVSNSYKSMVPETYIRKQ 500
Query: 903 SKKGFFRYWTPNIKKL 918
+ RY T +K+L
Sbjct: 501 TLTSGERYITQELKEL 516
>gi|374319114|ref|YP_005065613.1| DNA mismatch repair protein MutS [Rickettsia slovaca 13-B]
gi|383751051|ref|YP_005426152.1| DNA mismatch repair protein MutS [Rickettsia slovaca str. D-CWPP]
gi|360041663|gb|AEV92045.1| DNA mismatch repair protein MutS [Rickettsia slovaca 13-B]
gi|379774065|gb|AFD19421.1| DNA mismatch repair protein MutS [Rickettsia slovaca str. D-CWPP]
Length = 886
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 190/431 (44%), Gaps = 77/431 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEANYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 135 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL----KKSF 619
++NK + + + D + GI G+ S + A+G L YL K++
Sbjct: 220 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYLSLTQKQNI 268
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ R KF YM +D NLE+ NS+ G S G+L + LNH
Sbjct: 269 PHLPIPRIIKFH-------------SYMTIDFSTRHNLEIVTNSQDG-SQGSLLSTLNHT 314
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G RLL +L+ PL N I R + N + R+ L + D+ER L R
Sbjct: 315 VTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTR 373
Query: 740 LFASSEANGRN 750
+ + ++GR+
Sbjct: 374 I-TMNRSSGRD 383
>gi|422586986|ref|ZP_16661657.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
morsprunorum str. M302280]
gi|330872694|gb|EGH06843.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
morsprunorum str. M302280]
Length = 859
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 150/633 (23%), Positives = 253/633 (39%), Gaps = 124/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLSILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMNDLDA-------PHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFC 945
K L S+A + ++ +++L+ LIG
Sbjct: 511 EFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|325971227|ref|YP_004247418.1| DNA mismatch repair protein MutS [Sphaerochaeta globus str. Buddy]
gi|324026465|gb|ADY13224.1| DNA mismatch repair protein MutS [Sphaerochaeta globus str. Buddy]
Length = 865
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 189/411 (45%), Gaps = 66/411 (16%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPERNFSMNV 391
Q+ + K +H ++FF++G FYE+FE DA ++ L+L K QP CG P + +
Sbjct: 14 QYRQIKEQHQQTILFFRLGDFYEMFEQDAVEVSRLLNLTLTKRNGQPMCGIPYHAAKVYI 73
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
++L G ++ + EQTE PE G + ++ KRE+ VVT T+ E + L AN D
Sbjct: 74 KRLLEAGKKIAICEQTELPE---------GGR-QLAKREVVQVVTPATVVEEDFLEANRD 123
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVE 511
S++++L+ Q I D+ + + L V D ++L +L ++ P E
Sbjct: 124 -SFVVSLSFQKQG---------LSISYADITSGQFFLRMVEKDSRYAMLLSVLQQVNPRE 173
Query: 512 IIKPAN--MLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
I+ + L + + I H P + +P F I Y R+
Sbjct: 174 ILVNEDDYFLYQDFQSLIDAH---PAMVTKLPSWHF--------SISEGYTRLC------ 216
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
+++ ++ + GL ++ + +LS+ G L+YLK++ AK
Sbjct: 217 --NHIGSTSLKAFGL--------------ENKNPMLSSAGALLWYLKET---------AK 251
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
L G+ +++ Y+ +D + ++LE+ N G TL++ +N +T+ G RLL+
Sbjct: 252 TSLNQIEGYTLVSESEYLHIDEASRKSLELLANLADGTEKYTLFSSINATLTSMGARLLK 311
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
W+A PL + IR RQ V L A R L + D++RL +RL
Sbjct: 312 QWIASPLTDRERIRFRQSWVTLLCEDRDELA-RVRSHLKMVLDLQRLSSRL 361
>gi|442804336|ref|YP_007372485.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740186|gb|AGC67875.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 870
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 189/435 (43%), Gaps = 81/435 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ E K ++ D ++FF++G FYELF DA + ++EL++ + P C
Sbjct: 3 LTPMMQQYIETKKQYQDCLLFFRLGDFYELFFEDAEIASRELEIALTGRDCGLDERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + KL KGY+V + EQ E P KG +VKRE+ V+T GT+
Sbjct: 63 GVPWHSAHHYIAKLINKGYKVAICEQMEDPAL------AKG----IVKREVTRVITPGTV 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T+ E+L + ++LM++ S FGI V DV T Q++ + L
Sbjct: 113 TDPEMLDEKKN-NFLMSVYCSRNY---------FGIAVADVTTGEFYTTQLIYGNTVNKL 162
Query: 501 CCLLSELRPVEIIKPANMLS--PETERAILRHTRNPLVNDLVPL-SEFWDAETTVLEIKN 557
+ +P E++ L P IL+ + PL E++D
Sbjct: 163 FDEIYRYQPSELLVNQQFLKNVPGETLDILKERMGIYIT---PLDDEYFDR--------- 210
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
NKA S + N + C ++ + L A G + YLK
Sbjct: 211 ----------NKALSGIKNYKG------C---------NSIEQDEFALCASGALIGYLKV 245
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ K +L + YM++D+ + NLE+ E R GTL L+
Sbjct: 246 T---------QKVDLNHIKEIQKYKIENYMIIDSSSRRNLELTETLRDRKKRGTLLWVLD 296
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+TA G RLLR W+ +PL + I R DAV L+ F + E R+ L ++ DMER
Sbjct: 297 RTMTAMGGRLLRKWIEQPLLDVDEINRRLDAVEELK---DKFMIRSELRELLKKVYDMER 353
Query: 736 LLARLFASSEANGRN 750
L ++L + N R+
Sbjct: 354 LASKLVVGN-VNARD 367
>gi|167771419|ref|ZP_02443472.1| hypothetical protein ANACOL_02785 [Anaerotruncus colihominis DSM
17241]
gi|167666059|gb|EDS10189.1| DNA mismatch repair protein MutS [Anaerotruncus colihominis DSM
17241]
Length = 871
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 183/427 (42%), Gaps = 70/427 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQ--- 377
++ LS +Q++ K KH D ++FF++G FYE+F DA + ++EL+L G++
Sbjct: 5 MQKLSPMMQQYFAIKEKHKDHILFFRLGDFYEMFYDDAVLASRELELTLTGRDCGQEERA 64
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + +L +KGY+V + EQ E P KG VVKR + VVT
Sbjct: 65 PMCGVPFHACETYIARLIKKGYKVAICEQMENPAD------AKG----VVKRSVIRVVTP 114
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTL E +LS ++N A D+ +G+ D +T ++ + Q D
Sbjct: 115 GTLIESNMLS-----------EDANNYIACILFDQGWGLACADSSTGQLFVSQFAADAQG 163
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
V+ L P EII +L +TE + V DL F
Sbjct: 164 EVV-NELGRYCPSEIIFNEGILD-QTEVTAFIQKKLHCVADLCDNDRF------------ 209
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
A+ +A ++ G L G S+ L AL L+ ++
Sbjct: 210 --------DPQAAEDLIARHFSKPSGALGLDG--------RPLASRALGALLAYLYETQQ 253
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
L+ + + + M LD A NLE+ + R+G+ GTL L+
Sbjct: 254 KGLERI------------TDIAYVNPEQSMALDLTARRNLELTQTMRTGEKRGTLLWVLD 301
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
TA GKRL+R WL +PL N +I +R +AV L + + +LS + D+ERL+
Sbjct: 302 RTKTAMGKRLMRAWLDKPLVNPAVINKRLNAVEELFS-DTMLRCDLIDSLSGVFDLERLM 360
Query: 738 ARLFASS 744
R+ S
Sbjct: 361 TRIIYGS 367
>gi|383483744|ref|YP_005392657.1| DNA mismatch repair protein MutS [Rickettsia parkeri str.
Portsmouth]
gi|378936098|gb|AFC74598.1| DNA mismatch repair protein MutS [Rickettsia parkeri str.
Portsmouth]
Length = 890
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 190/431 (44%), Gaps = 77/431 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEANYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL----KKSF 619
++NK + + + D + GI G+ S + A+G L YL K++
Sbjct: 224 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYLSLTQKQNI 272
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ R KF YM +D NLE+ NS+ G S G+L + LNH
Sbjct: 273 PHLPIPRIIKFH-------------SYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHT 318
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G RLL +L+ PL N I R + N + R+ L + D+ER L R
Sbjct: 319 VTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTR 377
Query: 740 LFASSEANGRN 750
+ + ++GR+
Sbjct: 378 I-TMNRSSGRD 387
>gi|387762216|ref|YP_006069193.1| DNA mismatch repair protein MutS [Streptococcus salivarius 57.I]
gi|339292983|gb|AEJ54330.1| DNA mismatch repair protein MutS [Streptococcus salivarius 57.I]
Length = 852
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 160/655 (24%), Positives = 271/655 (41%), Gaps = 135/655 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ +S FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKSGSR---------FGLAYMDVSTGEFFATE-LDDF--S 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ ++ PE + +L N L++ ET V + ++
Sbjct: 160 SICSEIQNLKAREVVVGYDL--PEADEQVLVKQLNLLLS----------KETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQAAIMERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + AILE
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFNDDALSGLLQDLDTLPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A + ++
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQIERYIDRLQSLAKAIATVDVL 542
>gi|87310334|ref|ZP_01092464.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
gi|87286833|gb|EAQ78737.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
Length = 873
Score = 125 bits (313), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 154/605 (25%), Positives = 241/605 (39%), Gaps = 109/605 (18%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ--PHC 380
N++ +Q+ E K D ++FF+MG FYELF DA A+ L + KGE P
Sbjct: 2 NVTPMMQQYLEAKGVCGDAILFFRMGDFYELFNDDAKTAARVLGMTLTSRDKGENATPMA 61
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
GFP + KL GYRV + +Q E P ++ KG +V+REI +VT GTL
Sbjct: 62 GFPHHQLDNYLGKLIHLGYRVAICDQVENP------KEAKG----IVRREITRIVTPGTL 111
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T+ LL +++YL A+ P + T G+ V+++T R G + L
Sbjct: 112 TDDALLEPR-ESNYLAAVA----LPGKKETAAEVGVAWVEMSTGRFFSGV----FPTARL 162
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ I P+ L PE + H ++ P F E +K +
Sbjct: 163 ADQLAR------IAPSECLVPEESNVVPTHLHESILMTYRPAWAF-GKEGAGEVLKRHFE 215
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+T E GD + A G L YL+++
Sbjct: 216 TMTLEGFG----------------------------FGDQDQLAVCAAGAVLEYLEET-- 245
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ LL + +D +LE+ R G G+L A ++ CV
Sbjct: 246 -------QRTSLLHIERLTPYRASSTLEIDEATRRSLELTRTMRDGRRDGSLLAAIDRCV 298
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLAR 739
T G RLL WL+ PL + I R D V L V +P A + R++L + D+ERLLAR
Sbjct: 299 TVMGSRLLGDWLSNPLTDLEEIHRRLDGVEEL--VLEPALARDLRESLKEVYDLERLLAR 356
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ GR S + + Y C+ +++ L I SR+
Sbjct: 357 VM-----TGRASPRDLGYI----------------CKTLER----LPHIKAKITSRRSSM 391
Query: 800 ILTPGKGLPAIVSILKHFKDAFD---WVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
+ + L I +A D + + G I D+D+ ++ + A
Sbjct: 392 LRLLEERLDLCSEIRSQLAEALDDSLPLSPRDGGVICTGFNADLDH------LRGLAAGG 445
Query: 857 TKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
+ + E Q++ + T I + +G + Y LEV R +P DY + + K RY T
Sbjct: 446 KQWIAEYQKQEIERTGIANLKVGFNKVFGYYLEVTNVNRERIPTDYIRKQTLKNAERYIT 505
Query: 913 PNIKK 917
P +K+
Sbjct: 506 PELKE 510
>gi|333899521|ref|YP_004473394.1| DNA mismatch repair protein mutS [Pseudomonas fulva 12-X]
gi|333114786|gb|AEF21300.1| DNA mismatch repair protein mutS [Pseudomonas fulva 12-X]
Length = 857
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 155/634 (24%), Positives = 255/634 (40%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 14 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 73
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 74 SVEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTISDEAL 123
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D N A +R FG+ V+D+ + R V++ L L
Sbjct: 124 LDEHRD----------NLLAAVLGDERLFGLAVLDITSGRF---SVLEIKGWENLLAELE 170
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R R R P WD + R
Sbjct: 171 RLNPAELLIPDDWPQGLPAEKRRGSRR--RAP-----------WD-----------FERD 206
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
TA+ S + G L G E ++ + A G L Y K++
Sbjct: 207 TAQ----------KSLCQQFGTQDLKGFGCETLTLA------IGAAGCLLAYAKETQRTA 250
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E + + D A + + LD NL +G TL + ++ C T
Sbjct: 251 LPHLRSLRHERIDDTVILDGASRRNLELDV----NL-------AGGRDNTLQSVVDRCQT 299
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ+++A L +++ + L + D+ER+LAR
Sbjct: 300 AMGSRLLGRWLNRPLRDRAVLEARQESIACL--LDRYRFETLQPQLKEIGDLERILAR-- 355
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L H+
Sbjct: 356 -------------IGLRNARPRDLARLRDALGALPELQQAMAQLDCA----------HL- 391
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
L +S + +N +I GGV YD+ +++ + + ++L
Sbjct: 392 ---TALAGTISTYPELAELLATAIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQYL 448
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY R + KG R+ TP
Sbjct: 449 MDLETREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 506
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ + +L+RLIG
Sbjct: 507 LKEFEDKALSAKSRALAREKQLYEELLERLIGHL 540
>gi|15892324|ref|NP_360038.1| DNA mismatch repair protein MutS [Rickettsia conorii str. Malish 7]
gi|24638062|sp|Q92IL9.1|MUTS_RICCN RecName: Full=DNA mismatch repair protein MutS
gi|15619468|gb|AAL02939.1| DNA mismatch repair protein MutS [Rickettsia conorii str. Malish 7]
Length = 890
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 190/431 (44%), Gaps = 77/431 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEANYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL----KKSF 619
++NK + + + D + GI G+ S + A+G L YL K++
Sbjct: 224 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYLSLTQKQNI 272
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ R KF YM +D NLE+ NS+ G S G+L + LNH
Sbjct: 273 PHLPIPRIIKFH-------------SYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHT 318
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G RLL +L+ PL N I R + N + R+ L + D+ER L R
Sbjct: 319 VTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTR 377
Query: 740 LFASSEANGRN 750
+ + ++GR+
Sbjct: 378 I-TMNRSSGRD 387
>gi|383481338|ref|YP_005390253.1| DNA mismatch repair protein MutS [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378933677|gb|AFC72180.1| DNA mismatch repair protein MutS [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 890
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + A+G L YL +
Sbjct: 224 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 265
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 266 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHTVTKQ 322
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 323 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 380
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 381 NRSSGRD 387
>gi|157964373|ref|YP_001499197.1| DNA mismatch repair protein MutS [Rickettsia massiliae MTU5]
gi|189083185|sp|A8F164.1|MUTS_RICM5 RecName: Full=DNA mismatch repair protein MutS
gi|157844149|gb|ABV84650.1| DNA mismatch repair protein MutS [Rickettsia massiliae MTU5]
Length = 891
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 24 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 83
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 84 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 139
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 140 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 186
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 187 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 224
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + A+G L YL +
Sbjct: 225 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 266
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 267 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHTVTKQ 323
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 324 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 381
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 382 NRSSGRD 388
>gi|388257504|ref|ZP_10134683.1| DNA mismatch repair protein MutS [Cellvibrio sp. BR]
gi|387938671|gb|EIK45223.1| DNA mismatch repair protein MutS [Cellvibrio sp. BR]
Length = 882
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 159/628 (25%), Positives = 269/628 (42%), Gaps = 126/628 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KGEQ-PHCGFPER 385
+Q+ K++H D+++F++MG FYELF DA ++ LD+ GE P G P
Sbjct: 15 QQYLRIKAQHKDEIVFYRMGDFYELFFDDAKRASQILDITLTARGKSNGEPIPMAGIPFH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL ++G V V EQ P KG V+R++ +VT GT+++ L
Sbjct: 75 SADGYLAKLVKEGISVAVCEQIGDPA------TSKGP----VERKVMRIVTPGTVSDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D + L+AL +S ++ FGI +D+A+ R ++ +V + L+ ++ L
Sbjct: 125 LDSRRD-NLLVALHQSGET---------FGIASLDMASGRFLVLEV-EGLESAL--GELQ 171
Query: 506 ELRPVEIIKPANMLSP---ETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ ++ +P E + + R R P W+ + E R+
Sbjct: 172 RLSPAELLISDHITTPALVENRKGLRR--RGP-----------WEFDLETAE------RL 212
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + D G C D + L A G L Y +++
Sbjct: 213 LIQQFSTKDLA---------GFGC------------DHLTTALCAAGCLLSYARET---- 247
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
+ L + +++DA NLE+ N GD TL++ LN T+
Sbjct: 248 -----QRTALPHVRSLAHENRDEAVIMDAATRRNLELDINLTGGDEH-TLFSVLNRAATS 301
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLLR WL RPL + L+ RQDA+A L+ N F + F L R+ DMER+L RL A
Sbjct: 302 MGSRLLRRWLNRPLRDLDLLVGRQDAIAELQH-NYAFEI-FNGILKRVGDMERILGRL-A 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
A R+ +++++ S EL ++ L + S QL ++
Sbjct: 359 LRSARPRDLSRLLM-------------SIGTYPELQNE--------LAHKNSSQLKNLAQ 397
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHL- 860
P +V +L N +I GGV + YD+ ++ I + ++L
Sbjct: 398 QISTFPDLVELLSR-------AIIENPPVVIRDGGVIAEGYDAELDDLRNISTNAGQYLL 450
Query: 861 ----KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+E+ + T I + +G + Y +E+ + P DY R + K RY TP
Sbjct: 451 DLETRERER----TGIPTLKVGYNRVHGYFIELTTAQSEKAPADYIRRQTLKNAERYITP 506
Query: 914 NIKKLLGELSQAESEKESALKSILQRLI 941
+K+ + A+S + K++ + LI
Sbjct: 507 ELKEFEDKALSAQSRALAREKALYEELI 534
>gi|402225420|gb|EJU05481.1| hypothetical protein DACRYDRAFT_74703 [Dacryopinax sp. DJM-731 SS1]
Length = 1011
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 161/655 (24%), Positives = 269/655 (41%), Gaps = 96/655 (14%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+ Q + K + D ++ ++G Y F DA + +KEL + FP RNF
Sbjct: 106 ENQIRDLKKAYPDNLLLVEVGYKYRFFGEDATIASKELGI---------AAFPNRNFMSA 156
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
S++V+KL +GY+V V+ Q ET +K ++ RE+ A+ T T
Sbjct: 157 SIPVHRRSVHVKKLVSRGYKVGVIGQMETAAL----KKVGDNRSGPFVRELQALYTPATY 212
Query: 441 TEGELLSANPDA------SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
+ + DA L+ L E + G+ V +T I+ D
Sbjct: 213 VDETDSLDDDDAFGQTTTRPLLCLIEDLRGGMGADERVAIGLVSVVPSTGDIVYDDFQDG 272
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
S L LS L P E+I P+ LS TER + N + L +++
Sbjct: 273 HMRSELETRLSHLNPCELILPSKGLSKTTERLLNNFAGNSNAGGSIRLERI----AKIMD 328
Query: 555 IKNIYNRITAESLNKADSN---VANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ + ++T++ +K D + S G +T + +EL V+ AL
Sbjct: 329 YTSAF-QLTSDFYSKKDEGSPRASESFRSGKLMTAI----AEL------PQNVVIALAHC 377
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +L L ++ LR KF F + K +M+L L NLE+F N G+
Sbjct: 378 VNHLTAFGLADSFLR-TKF-------FAEFTTKAHMLLAGNTLSNLELFRNQDDFSERGS 429
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L++ T FG RLLR+W+ PL + + ER DAV L + + R L P
Sbjct: 430 LMWVLDNTKTKFGSRLLRSWVGGPLIDLKALNERIDAVEELLSTSSAVIEQLRTVLKGTP 489
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELM---DQACSSLGAI 788
D+ + L R V Y A ++L + A + SS+G
Sbjct: 490 DLVKSLCR---------------VQYGKCAPRELASLLYAFSRIARAFPPFEQSSSVG-- 532
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI----IPHGGVDMDYDS 844
+S L+ I+ LP+ + + D +A + ++ P +
Sbjct: 533 ---FKSHILNDIVY---SLPSALETVTQLMQPLDLRKARDDNKVDLWLDPQKFPAIQDTK 586
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES-LRGSVPRDYELRSS 903
C + +E L +HL E RK + S+ Y TI YL+EV + ++ VP D+ SS
Sbjct: 587 DC--IATVEYELGEHLHEIRKTIKQPSVQYKTIAGIEYLIEVSGAQVKKLVPADWSRISS 644
Query: 904 KKGFFRYWTPNIKKLLGELSQAE----SEKESALKSILQRLIGQFCEHHNKWRQM 954
+ R+ TP ++++L E + + +E E A +S LQ + E+++ +R +
Sbjct: 645 TRTATRFHTPQVRRMLEERERYKESLTAEAEKAYQSFLQ----EVSENYDVFRDV 695
>gi|116180884|ref|XP_001220291.1| hypothetical protein CHGG_01070 [Chaetomium globosum CBS 148.51]
gi|121791328|sp|Q2HFD4.1|MSH3_CHAGB RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|88185367|gb|EAQ92835.1| hypothetical protein CHGG_01070 [Chaetomium globosum CBS 148.51]
Length = 1156
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 157/663 (23%), Positives = 267/663 (40%), Gaps = 73/663 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG----EQPH--- 379
L+ + Q+ + K KHMD V+ ++G + F DA + AKEL + + G ++PH
Sbjct: 228 LTPMEIQFLDIKRKHMDTVLVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEPHIDR 287
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P S++V++L G++V VV Q ET +K +++ R++ + T
Sbjct: 288 FASASIPVHRLSVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLTNIYT 343
Query: 437 KGTLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
KGT + GEL + YL+ LTES + G+ V AT II
Sbjct: 344 KGTYIDETGELDQPGEGAGASAGGYLLCLTESPVKGLGTDENVHIGVMAVQPATGDIIYD 403
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWD 547
D + L + P E++ LS T + + L + + D +
Sbjct: 404 DFEDGFMRREIETRLLHISPCELLVVGE-LSKATNKLVQHLAGSSTNVFGDRSRVERVPK 462
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
++T E + + A + D A+ +L +++ +S + LSA
Sbjct: 463 SKTMAAEASSHVTQFYAGKVKGDDERSAS-------------LLDKVLKLPESVTVCLSA 509
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + +L + L E + K+ F + +M+++ LE+LEV+ N+
Sbjct: 510 M---ITHLTEYGL-EHIFDLTKY-------FQSFTTRQHMLINGTTLESLEVYRNATDQS 558
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
G+L L+ T G+RLLR W+ RPL + + ER AV L F ++ +
Sbjct: 559 EKGSLLWALDKTRTRPGRRLLRKWIGRPLLDRERLEERVTAVEELLEHQSNFKVDRLGGV 618
Query: 728 --SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
S D+ER L R++ K E +S L + + S +
Sbjct: 619 LNSIKADLERSLIRIY------------------YGKCTRPELLSTLQTLQRISIEFSRV 660
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
+ + L I+ LP I +I+ + D + A + + D
Sbjct: 661 KTPEDTGFNSSL--IVEAIYALPGIGTIVSAYLDKINPEAARKDDKYTFFRDDEETEDIT 718
Query: 846 CKK--VKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
K + +EA L H K+ KL T +TYVT+ YL+EVP + VP + S
Sbjct: 719 NHKLGIAAVEADLDVHRKDAATKLSKKTPVTYVTVSGIEYLIEVPNTDLKHVPASWAKIS 778
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLT 962
K R+ TP + +L+ E Q + +A + L+ + R VA+ A L
Sbjct: 779 GTKKLSRFHTPEVMRLMNERDQHKEALAAACDNAFTDLLKSIASEYQPLRDAVASLATLD 838
Query: 963 LIL 965
+L
Sbjct: 839 CLL 841
>gi|238650746|ref|YP_002916599.1| DNA mismatch repair protein [Rickettsia peacockii str. Rustic]
gi|238624844|gb|ACR47550.1| DNA mismatch repair protein [Rickettsia peacockii str. Rustic]
Length = 890
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 189/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKHGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + D + GI G+ S + A+G L YL +
Sbjct: 224 VFAINKCKKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 265
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 266 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHMVTKQ 322
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 323 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 380
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 381 NRSSGRD 387
>gi|77457361|ref|YP_346866.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Pf0-1]
gi|92087045|sp|Q3KH79.1|MUTS_PSEPF RecName: Full=DNA mismatch repair protein MutS
gi|77381364|gb|ABA72877.1| DNA mismatch repair protein [Pseudomonas fluorescens Pf0-1]
Length = 860
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 157/634 (24%), Positives = 264/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFENLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|403746490|ref|ZP_10955023.1| DNA mismatch repair protein MutS [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120821|gb|EJY55175.1| DNA mismatch repair protein MutS [Alicyclobacillus hesperidum
URH17-3-68]
Length = 876
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 163/648 (25%), Positives = 265/648 (40%), Gaps = 127/648 (19%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPH 379
+L+ +Q+ E K+ D ++ F++G FYELF DA V ++ LD+ G P
Sbjct: 2 SLTPMMRQYQEIKATLEDTLLMFRLGDFYELFFEDAVVASRALDITLTGRDAGEAGRIPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P +E+L G+RV + EQ E P + KG +V+REI +VT GT
Sbjct: 62 CGVPYHALESYLERLIDHGFRVAICEQVEDP------KTAKG----LVQREIVRIVTPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
AN A+ +A A G+C VDV T ++ G+ C
Sbjct: 112 AL------ANEQANRFLASFVGAGDKA--------GLCFVDVGTGEVLFGEG----GCGE 153
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L L P+E++ PE PL+ + E VL + +
Sbjct: 154 CVEQLRRLAPIELLMAQGAEMPE------------------PLARYVSEEQVVLTRRQLG 195
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
A E L P +L D+ S +A L Y++++
Sbjct: 196 ---------------AKGYLEKQYLVGQPEVLGI-----DTTSPARTACDMALAYIEET- 234
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
K +L + + +M+L A+ +LE+ +R G+L L+
Sbjct: 235 --------QKTQLAHLQAPRPLFEADHMLLTQAAILHLELTATARDRARKGSLLDLLDET 286
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLL 737
TA G R+L+ WL RPL I R DAV Q F L E R+AL + DM RLL
Sbjct: 287 ATAAGSRMLKAWLERPLCKKTDIEARHDAVDYF---YQDFILREEVREALRGIHDMARLL 343
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
AR F+ AN R+ + AA +Q+ + + L+ + +L ++ E +
Sbjct: 344 AR-FSFGSANARDLLALAQSLRAA-RQVVDIVRTPAAPSLLMRIVDALPDLVPLYEDAFV 401
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
+ P PA + F+D GV + D +++ +++S
Sbjct: 402 QLVDDP----PATIRDGGMFRD-----------------GVHAELD----RLRSMQSSGR 436
Query: 858 KHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L+E ++ T I + +G + Y +EV ++ SVP +YE R + R+ P
Sbjct: 437 AWLRELEQSERERTGIKSLKVGYNKVFGYYIEVSKANLASVPAEYERRQTLAAAERFVLP 496
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
+K+ E+ A+ E+ A + L R FC+ +++AA+AG+
Sbjct: 497 ALKEREAEIVSAQ-ERAVAFEEGLFR---SFCD------RVLAASAGI 534
>gi|383312356|ref|YP_005365157.1| DNA mismatch repair protein MutS [Candidatus Rickettsia amblyommii
str. GAT-30V]
gi|378931016|gb|AFC69525.1| DNA mismatch repair protein MutS [Candidatus Rickettsia amblyommii
str. GAT-30V]
Length = 886
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 135 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + A+G L YL +
Sbjct: 220 FFAVNKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 261
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ GD G+L + LNH VT
Sbjct: 262 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQ-GDLQGSLLSTLNHTVTKQ 318
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 319 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 376
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 377 NRSSGRD 383
>gi|340397917|ref|YP_004726942.1| DNA mismatch repair protein mutS [Streptococcus salivarius CCHSS3]
gi|338741910|emb|CCB92415.1| DNA mismatch repair protein mutS [Streptococcus salivarius CCHSS3]
Length = 852
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 163/678 (24%), Positives = 278/678 (41%), Gaps = 148/678 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYEDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQSYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ ++ FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKAGSR---------FGLAYMDVSTGEFFATE-LDDF--S 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ ++ PE + +L N L++ ET V + ++
Sbjct: 160 SVCSEIQNLKAREVVVGYDL--PEADEQVLVKQLNLLLS----------KETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQAAIMERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + +ILE
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKSILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFNDEALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R+ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGS 969
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A +
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVD------- 540
Query: 970 LLHAFLILQSNSCSSEMN 987
+LQS + ++E N
Sbjct: 541 ------VLQSLAVTAETN 552
>gi|408483502|ref|ZP_11189721.1| DNA mismatch repair protein MutS [Pseudomonas sp. R81]
Length = 863
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 156/634 (24%), Positives = 259/634 (40%), Gaps = 126/634 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGAKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 SVQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLD + NLE + + +G TL + ++ C TA
Sbjct: 267 T-----------------------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 303 MGSRLLTRWLNRPLRDLSVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI-- 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
RN+ D A+ L++ ++AL L A + ++ L +
Sbjct: 359 ----GLRNARP----RDLAR--LRDALAAL----------PQLQAAMTELDTPHLQQLAV 398
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + ++L K D N II GGV YDS +++ + + + L
Sbjct: 399 TAGTYPELAALLG--KAIID-----NPPAIIRDGGVLKTGYDSELDELQALSENAGQFLI 451
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP +
Sbjct: 452 DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFC 945
K K L S+A + ++ +++L+ LI Q
Sbjct: 510 KEFEDKALSAKSRALAREKMLYENLLEDLISQLA 543
>gi|341583633|ref|YP_004764124.1| DNA mismatch repair protein MutS [Rickettsia heilongjiangensis 054]
gi|340807859|gb|AEK74447.1| DNA mismatch repair protein MutS [Rickettsia heilongjiangensis 054]
Length = 886
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 135 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLNENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + A+G L YL +
Sbjct: 220 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 261
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 262 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQ-GSSQGSLLSTLNHTVTKQ 318
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 319 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 376
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 377 NRSSGRD 383
>gi|289626001|ref|ZP_06458955.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aesculi
str. NCPPB 3681]
gi|289651483|ref|ZP_06482826.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aesculi
str. 2250]
gi|422583748|ref|ZP_16658868.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aesculi
str. 0893_23]
gi|330868575|gb|EGH03284.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 859
Score = 124 bits (311), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 153/635 (24%), Positives = 256/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 219 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L E+ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
PA+ +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPALADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|28210987|ref|NP_781931.1| DNA mismatch repair protein MutS [Clostridium tetani E88]
gi|44888200|sp|Q895H2.1|MUTS_CLOTE RecName: Full=DNA mismatch repair protein MutS
gi|28203426|gb|AAO35868.1| DNA mismatch repair protein mutS [Clostridium tetani E88]
Length = 881
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 186/429 (43%), Gaps = 79/429 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ E K K D ++FF++G FYE+F DA +KEL+L + P C
Sbjct: 3 LTPMMQQYLEVKEKCKDCILFFRLGDFYEMFFEDAETASKELELVLTGRDCGLSKRAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + S + +L KGY++ + EQ E P KG +VKR+I +VT GT
Sbjct: 63 GIPYHSASNYINRLVSKGYKIAICEQLEDPSA------AKG----IVKRDIVKIVTPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
++ L+ + +Y+M+L ++S A +C D++T LD S++
Sbjct: 113 SDSNFLNETKN-NYIMSLYIEDKSVA---------MCFCDISTGDFF--ATSHSLDKSII 160
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+S+ P E+ +L+ + ++ IL+ +N + L + + + +LE
Sbjct: 161 LDEISKFDPSEL-----LLNKDIDKNILKEIKNRFTISITNLEKDYFKDYNLLE------ 209
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
G S+ + + S VL G L
Sbjct: 210 ----------------------------GQFSDF--SKEEYSLVLIKCGNGLL------- 232
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ +L K L F + Y+ +D + NLE+ E R G+L L+ C
Sbjct: 233 -KYILETQKMSLGHIDCFKNYNIVDYLSMDINSRRNLEITETIRDKSRKGSLLWVLDKCS 291
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G RL+R W+ +PL N I +R +AV L +N + + AL + D++R++ ++
Sbjct: 292 TAMGARLIRNWVEQPLINKEKIDKRLNAVEELV-LNISLHEDLKDALKDIYDIQRIVGKI 350
Query: 741 FASSEANGR 749
+S N +
Sbjct: 351 -SSKNVNAK 358
>gi|366162302|ref|ZP_09462057.1| DNA mismatch repair protein MutS [Acetivibrio cellulolyticus CD2]
Length = 872
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 192/442 (43%), Gaps = 89/442 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ L+ +Q+ + K ++ D ++FF++G FYE+F DA +KEL++ +
Sbjct: 1 MATLTPMMQQYLDIKGQYKDCILFFRLGDFYEMFFSDAETASKELEITLTGKDCGLDERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + +L KGY+V + EQ E P KG +VKR++ VVT
Sbjct: 61 PMCGVPFHSADSYICRLINKGYKVAICEQIEDPAM------AKG----IVKRDVIRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT-----SRIILG--- 489
GT+T+ +L + +YLM+L + FGI VD+ T + I LG
Sbjct: 111 GTVTDSAMLDDKKN-NYLMSLYKHKTY---------FGIAFVDITTGDFTSTSIALGNTE 160
Query: 490 -QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
++MD+ ++ P E++ + LS E L+ N ++ +
Sbjct: 161 SKLMDE---------IARFAPSEMVVNSEFLSDENLVKTLKKRFNLYISTI--------- 202
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
E EI Y++ E L S+ + E D ++A
Sbjct: 203 EDKYFEIG--YSK---EKLKSYFSDHEICENEFD--------------------IYINAS 237
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
G L Y++++ K L F + YMVLD NLE+ E R +
Sbjct: 238 GALLEYIEQT---------QKVNLDHIQSFNKYRIEEYMVLDVATRRNLELTETMREKNR 288
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
G+L L+ +T+ G R LR W+ +PL N IR+R AV + +E R+ L
Sbjct: 289 KGSLLWVLDRTMTSMGGRTLRKWIEQPLINIYDIRDRHLAVNEFKD-KFMVRMEVRELLK 347
Query: 729 RLPDMERLLARLFASSEANGRN 750
R+ DMERL+ ++ S AN R+
Sbjct: 348 RVYDMERLMGKIVLGS-ANCRD 368
>gi|391864666|gb|EIT73961.1| mismatch repair MSH3 [Aspergillus oryzae 3.042]
Length = 1111
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 152/678 (22%), Positives = 279/678 (41%), Gaps = 86/678 (12%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
R L+ +KQ + K KHMD V+ ++G + F DA AKEL++ + G E P
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++V++L G++V VV Q ET + +++ R+
Sbjct: 256 EAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAAL----KAAGDNRNAPFGRK 311
Query: 431 ICAVVTKGTLT------EGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVV 479
+ + TKGT EG S + + Y++ +TE+N GI V
Sbjct: 312 LTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAV 371
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
AT I+ + D S + L L P E++ + LS TE+ + L +
Sbjct: 372 QPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGD-LSKATEKLVQHLSGNKTNAFG 430
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
D + + A+T E + + AE + K + A + + L L ++++
Sbjct: 431 DEIRVERAPKAKTAAAESHSHVSSFYAERMKKVN---ATNDVQASSL------LQKVLNL 481
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
+ + LS++ + ++ + L E + + K+ F + + +M+L+A L +L
Sbjct: 482 SEQATICLSSM---IKHMSEYGL-EHVFQLTKY-------FQHFSSRSHMLLNANTLNSL 530
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
E++ N + G+L+ L+ T FG+R+LR W+ RPL N + ER DAV L+ + +
Sbjct: 531 EIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLER 590
Query: 718 -PFALEFRKALSRL-PDMERLLARLFASS----EANGRNSNKVVLYEDAAKKQLQEFISA 771
A + + L R+ D+E+ L R++ E ++ ++ A +Q
Sbjct: 591 VALAEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAG--VQSPADT 648
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSG 830
L+ +A +SL ILE+ + L I D +++ E+ +
Sbjct: 649 GFSSPLISKAVASLPTILEDVV-----------RFLDKINMHAAKNDDKYEFFRESEETD 697
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE-- 888
I H + +E L +H ++LG + YVT+ YL+ V
Sbjct: 698 EITEHK----------LGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKS 747
Query: 889 -SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
S++ VP + S K R+ TP + +LL + Q + + + +
Sbjct: 748 PSIK-KVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISAS 806
Query: 948 HNKWRQMVAATAGLTLIL 965
+ +R V + A L ++
Sbjct: 807 YQSFRDSVQSLATLDCLI 824
>gi|402837040|ref|ZP_10885571.1| DNA mismatch repair protein MutS [Mogibacterium sp. CM50]
gi|402270056|gb|EJU19325.1| DNA mismatch repair protein MutS [Mogibacterium sp. CM50]
Length = 867
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 171/658 (25%), Positives = 273/658 (41%), Gaps = 118/658 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
LS KQ++ K ++ D ++ +++G FYELF DA ++EL+L ++ P
Sbjct: 2 TLSPMMKQYFAIKEQYKDCLLMYRLGDFYELFFDDALTTSRELELTLTGRNCGLEERAPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + + KL KGY+V + EQ E P ++ KG +V RE+ ++T GT
Sbjct: 62 CGVPFHAANSYIAKLVSKGYKVAICEQIEDP------KEAKG----IVNREVIRIITPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ E SA D YL ++ + S A I VD+ T ++ DD DC
Sbjct: 112 IDIDEATSAK-DNLYLASIYVNGSSSA---------IAYVDITTGEFNALEIKDDGDCEQ 161
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L LS + P EII + S +R Y
Sbjct: 162 LIAELSRIVPREIICYSKDASAFIDR---------------------------------Y 188
Query: 560 NRITAES-LNKADSNVANSQAEGDGLTCLPGILSEL-ISTGDSGSQVLSALGGTLFYLKK 617
++++ E+ +N+ D + + D L G+ S + + D +SA G L YL +
Sbjct: 189 SKMSPETYINEIDDSYFKYSSCADILKTQFGVTSLIPLDIQDRREITISA-GALLLYLTE 247
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ ++ K + S G MVLD + NLE+ E + G+L ++
Sbjct: 248 T--EKQASPQIKHLNIKESDSG-------MVLDRSTMRNLELLETQYNHSQKGSLLGVID 298
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF-ALEFRKALSRLPDMERL 736
TA G RL+R ++ PL NS I +R DAV L V+ P +L + D ERL
Sbjct: 299 KTHTAMGGRLIRRFIKEPLNNSNAINKRLDAVEVL--VDLPLNRANIVASLKHVYDFERL 356
Query: 737 LARLFASSEANGRN--SNKVVLYEDAAKKQLQEFISALHGCELMDQA--CSSLGAILENT 792
AR+ AS ANG++ + K L+E A K + I A E+ SSL ++EN+
Sbjct: 357 TARI-ASMRANGKDMVALKTTLHELPAIKDELKHIDAPLLNEIFSSLDDFSSLEELIENS 415
Query: 793 ESRQLHHILTPG----KGLPAIVSILK-HFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ +T G G + LK KDA W+
Sbjct: 416 IVDEPPFTITDGDLIKSGYSTELDNLKLSIKDAKAWITG--------------------L 455
Query: 848 KVKEIEASLTKHLKEQ-RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ KE E + K+LK K+ G Y ++V +S VP DY + +
Sbjct: 456 EAKEKERTGIKNLKVGFNKVFG-------------YYIDVSKSNLPLVPDDYVRKQTLVN 502
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
RY TP +K+ + AE++ S I + + + + ++ A+ A L ++
Sbjct: 503 NERYITPELKEKESLVLSAEAKINSLEYEIFKEIRASIEPYIARLQKASASVALLDVL 560
>gi|254503118|ref|ZP_05115269.1| DNA mismatch repair protein MutS [Labrenzia alexandrii DFL-11]
gi|222439189|gb|EEE45868.1| DNA mismatch repair protein MutS [Labrenzia alexandrii DFL-11]
Length = 906
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 185/414 (44%), Gaps = 62/414 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPERN 386
Q+ E K+ + D ++F++MG FYELF DA + ++ L + K GE P CG P
Sbjct: 22 QFIEIKTANPDSLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHQGEDIPMCGVPVHA 81
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
++KL G+RV V EQTE P + K++GSK V + +VT GTLTE LL
Sbjct: 82 ADDYLQKLIALGHRVSVCEQTEDPAE----AKKRGSKSVVRRDV-VRLVTPGTLTEERLL 136
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A + +YLMALT S + D +G+ +D++T + + D L L++
Sbjct: 137 DAGAN-NYLMALTRLKGG--SLAGDAVYGLAWIDMSTGSFQVSET----DHQRLAADLAQ 189
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
+ P E+I N+L + R + + L VP + F+D T + + +
Sbjct: 190 VAPRELILADNLLQEQDVRQLAELSGGALSP--VPRA-FFDGSTAADRLAHYF------- 239
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
G+ L G G LSA G L Y++K+ L E
Sbjct: 240 ----------------GVKTLDGF-------GTFSRAELSAAAGILSYIEKTQLGER--- 273
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
P A M++D NLE+ + SG+ G+L + ++ VT G R
Sbjct: 274 ------PPLDPPVREAGAGRMLIDPATRANLEL-SRTLSGEKQGSLLSTIDRTVTGGGSR 326
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
LL + LA PL N I+ R DAVA N+ R+ L PDM R L+R+
Sbjct: 327 LLASRLAGPLINVDAIQRRHDAVAFFLN-NEIMREGLRQTLKGAPDMARALSRI 379
>gi|167040248|ref|YP_001663233.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750830|ref|ZP_05491715.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914332|ref|ZP_07131648.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307724432|ref|YP_003904183.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
gi|166854488|gb|ABY92897.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X514]
gi|256750413|gb|EEU63432.1| DNA mismatch repair protein MutS [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889267|gb|EFK84413.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X561]
gi|307581493|gb|ADN54892.1| DNA mismatch repair protein MutS [Thermoanaerobacter sp. X513]
Length = 867
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 153/601 (25%), Positives = 251/601 (41%), Gaps = 110/601 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDTKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N +N + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFKNN-NCAIN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKPYMANS------LAALFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++++ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEELFN-DYKNRQDLKQLLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 ILQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASTEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP + + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERFIRKQTLANAERYVTPELKE 511
Query: 918 L 918
+
Sbjct: 512 I 512
>gi|345017667|ref|YP_004820020.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033010|gb|AEM78736.1| DNA mismatch repair protein mutS [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 867
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 153/601 (25%), Positives = 251/601 (41%), Gaps = 110/601 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDVGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + ++
Sbjct: 118 MDEKTN-NYLVSVFKGRDN---------YGICAVDVTTGDLYATELKNCKDTKRVYDEIT 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I ++ N +N + D E + I+ +N+ + E
Sbjct: 168 KYAPSEIIANEDFLKNNKYVKIFKNN-NCAIN---IYEKQLDYEEKIKLIETQFNKKSEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K +ANS L L L EL T L + L Y S
Sbjct: 224 LGIKDKPYMANS------LAALFSYLQELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++++ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R AV L + + ++ L+++ D+ERL ++
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEELFN-DYKNRQDLKQLLNKIYDLERLASK------ 357
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + ILE SR L I
Sbjct: 358 ---------IVYQSINPK---DFIS----IKLSLQNLPYIKEILEKFNSRLLKEICEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 ILQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASTEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP + + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERFIRKQTLANAERYVTPELKE 511
Query: 918 L 918
+
Sbjct: 512 I 512
>gi|169765552|ref|XP_001817247.1| DNA mismatch repair protein MSH3 [Aspergillus oryzae RIB40]
gi|121806689|sp|Q2UT70.1|MSH3_ASPOR RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|83765102|dbj|BAE55245.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1111
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 153/678 (22%), Positives = 279/678 (41%), Gaps = 86/678 (12%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
R L+ +KQ + K KHMD V+ ++G + F DA AKEL++ + G E P
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++V++L G++V VV Q ET + +++ R+
Sbjct: 256 EAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAAL----KAAGDNRNAPFGRK 311
Query: 431 ICAVVTKGTLT------EGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVV 479
+ + TKGT EG S + + Y++ +TE+N GI V
Sbjct: 312 LTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAV 371
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
AT I+ + D S + L L P E++ + LS TE+ + L +
Sbjct: 372 QPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGD-LSKATEKLVQHLSGNKTNAFG 430
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
D + + A+T E + + AE + K + A + + L L ++++
Sbjct: 431 DEIRVERAPKAKTAAAESHSHVSSFYAERMKKVN---ATNDVQASSL------LQKVLNL 481
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
+ + LS++ + ++ + L E + + K+ F + + +M+L+A L +L
Sbjct: 482 SEQATICLSSM---IKHMSEYGL-EHVFQLTKY-------FQHFSSRSHMLLNANTLNSL 530
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
E++ N + G+L+ L+ T FG+R+LR W+ RPL N + ER DAV L+ + +
Sbjct: 531 EIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLER 590
Query: 718 PFALEFRKAL-SRL-PDMERLLARLFASS----EANGRNSNKVVLYEDAAKKQLQEFISA 771
+E K L R+ D+E+ L R++ E ++ ++ A +Q
Sbjct: 591 VALVEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAG--VQSPADT 648
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSG 830
L+ +A +SL ILE+ + L I D +++ E+ +
Sbjct: 649 GFSSPLISKAVASLPTILEDVV-----------RFLDKINMHAAKNDDKYEFFRESEETD 697
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE-- 888
I H + +E L +H ++LG + YVT+ YL+ V
Sbjct: 698 EITEHK----------LGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKS 747
Query: 889 -SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
S++ VP + S K R+ TP + +LL + Q + + + +
Sbjct: 748 PSIK-KVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISAS 806
Query: 948 HNKWRQMVAATAGLTLIL 965
+ +R V + A L ++
Sbjct: 807 YQSFRDSVQSLATLDCLI 824
>gi|157803980|ref|YP_001492529.1| DNA mismatch repair protein MutS [Rickettsia canadensis str.
McKiel]
gi|166232131|sp|A8EZG1.1|MUTS_RICCK RecName: Full=DNA mismatch repair protein MutS
gi|157785243|gb|ABV73744.1| hypothetical protein A1E_04085 [Rickettsia canadensis str. McKiel]
Length = 891
Score = 124 bits (310), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 189/420 (45%), Gaps = 68/420 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCG 381
++ +Q+ + K H+D ++ F+MG FYE+F DA + +K L + K GE+ P CG
Sbjct: 21 TKMMQQYLDIKFAHLDCLLLFRMGDFYEMFYEDATIASKVLGIALTKRGKNGEEEIPMCG 80
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL ++ +++ + +Q ETPE+ K KG VV R++ ++T GT+
Sbjct: 81 IPYHALENYLTKLIKENHKIAICDQLETPEE----AKNKGGYKAVVSRDVTRIITPGTII 136
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E + A+ + +YL +L N+ AS +C VD++TS I + V + + +
Sbjct: 137 EENFI-ASDEPNYLASLVIPQNKETAS--------LCYVDLSTSEIFVVNVPE----AEI 183
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+P EI+ N+ S S D NI+
Sbjct: 184 LNELARLKPREILLSENLRS----------------------SNLAD---------NIFK 212
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
++ + DS A ++ E L + ++ G+ S + +G L YL
Sbjct: 213 QLNFRITYQVDSFFAVNKCEKIILDFYK--MKDIKGIGEISSGQICTIGSILEYL----- 265
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ NS+ G S G++ + +NH V
Sbjct: 266 --SLTQKQNIPHLPIPRIINF--HSYMAIDVATRRNLEIVTNSQGG-SKGSVLSTINHTV 320
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL + I +R + + N + R+ L R+ D+ER L R+
Sbjct: 321 TKQGGRLLYNFLSSPLTDITKINQRLN-ITDFFYSNPAIVSKIREYLKRISDIERCLTRI 379
>gi|383483187|ref|YP_005392101.1| DNA mismatch repair protein MutS [Rickettsia montanensis str. OSU
85-930]
gi|378935541|gb|AFC74042.1| DNA mismatch repair protein MutS [Rickettsia montanensis str. OSU
85-930]
Length = 890
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALESYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + ++G L YL +
Sbjct: 224 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICSIGSVLEYL-------S 265
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 266 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQ-GSSQGSLLSTLNHTVTKQ 322
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 323 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 380
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 381 NRSSGRD 387
>gi|429963195|gb|ELA42739.1| hypothetical protein VICG_00054 [Vittaforma corneae ATCC 50505]
Length = 985
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 5/216 (2%)
Query: 287 READKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVI 346
++ +++ FL D RD + R G+ YDP TL++P + + +KQ+W+ KSK+ D VI
Sbjct: 172 QQEERYEFL-VDVRDKNKIRKGEDGYDPTTLHIPKKYYDKFTPFEKQFWDIKSKYFDTVI 230
Query: 347 FFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVE 405
FFK GKFYEL+E DA V +K DL+ + + G PE ++ K GY++ V+
Sbjct: 231 FFKKGKFYELYEDDAIVASKLFDLKIVERVNMKMAGVPESSYEGWAAKFVAHGYKIGRVD 290
Query: 406 QTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSP 465
Q E ++ R++ G KDK++ RE+ ++T GT E + +L L + N+
Sbjct: 291 QVENSIGKKI-REQNGKKDKIIARELKEIITTGTAYSPECIDG-CFPFFLGVLIQHNRCN 348
Query: 466 ASQSTDRC-FGICVVDVATSRIILGQVMDDLDCSVL 500
++Q + F I + D ++I +G D DCS L
Sbjct: 349 STQCAGQIHFSILLYDAGANKISIGTFCDSYDCSQL 384
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 129/296 (43%), Gaps = 31/296 (10%)
Query: 646 YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRER 705
+M LD L NL++ N+ +L+ +N+C T FG+RLLR W+ PL N +I ER
Sbjct: 465 FMTLDGSTLVNLDILTNNFDSTEDHSLFKSINYCSTPFGQRLLRKWIVTPLKNLEMINER 524
Query: 706 QDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQL 765
+ +N E ++L + D+ER RL S K L
Sbjct: 525 RRIAQIFSKINSS---EIVQSLKEIGDIERYYGRLGGCS---------------PTFKNL 566
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVE 825
+ F+ +L + A L AI + Q + K L + +H D F+ V
Sbjct: 567 KSFVESLKKA---NSALKILKAIFSDQCESQSN---INAKHLGCV----QHVLDQFEKVY 616
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLE 885
+ I+P D + ++V EI+ L K LK +K G + Y +IGK+++ +E
Sbjct: 617 LLSDSDILPGNDNDELFVLNRQQV-EIQDKLQKFLKSLKKSTGFNDLCYKSIGKEIFQIE 675
Query: 886 VPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
+P + L SS K RY++ +K + E + E + + SIL+R +
Sbjct: 676 T--GYNNQMPSGFYLVSSTKTQRRYYSDELKAITNEFEECEEKIFQSKGSILRRAV 729
>gi|325289888|ref|YP_004266069.1| DNA mismatch repair protein MutS [Syntrophobotulus glycolicus DSM
8271]
gi|324965289|gb|ADY56068.1| DNA mismatch repair protein MutS [Syntrophobotulus glycolicus DSM
8271]
Length = 853
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 180/417 (43%), Gaps = 87/417 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
KQ+ K+K D ++FF++G FYE+F DA A L++ E P CG P
Sbjct: 8 KQYESIKAKVPDCILFFRLGDFYEMFADDALTAAPVLEIALTSREGGSGSRIPMCGVPHH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++KL G++V + EQTE P+Q KG +VKR+I +V+ GT+ +
Sbjct: 68 SAENYIQKLIAAGFKVAICEQTEDPQQ------SKG----IVKRDIVRIVSPGTV---DT 114
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
++A +YL A+ + ++ +G+ +D+ T L Q L L+
Sbjct: 115 VAAEHKNNYLAAIYK----------EKDWGLAYLDLTTGDFRLFQTPSQ---QTLLNELN 161
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII P V +S+ D +
Sbjct: 162 RINPAEIILPKEFA--------------------VSMSKALDGYYS-------------- 187
Query: 566 SLNKADSNVANSQAE-GDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
N AD + +S A + G+L ++ + A G Y+KK+ D +L
Sbjct: 188 --NAADKTIFSSLAGFRERFHNYTGLLEQMPVSA-------RAAGALWNYIKKNIPDSSL 238
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
EL C + MVLD +NLE+ E+SR GD GT++ LN TAFG
Sbjct: 239 QNV--IELKSCR------QSEVMVLDRWTRKNLELVESSRFGDERGTIFDVLNLTKTAFG 290
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDMERLLARL 740
R+LR W+ +PL N I R D V L FA E K LS + D+ERL ARL
Sbjct: 291 ARMLRHWIQQPLLNKEQIEARLDTVEEL--TKNTFARQELFKCLSHVYDLERLTARL 345
>gi|422297519|ref|ZP_16385154.1| DNA mismatch repair protein MutS [Pseudomonas avellanae BPIC 631]
gi|407991047|gb|EKG32991.1| DNA mismatch repair protein MutS [Pseudomonas avellanae BPIC 631]
Length = 846
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 150/633 (23%), Positives = 252/633 (39%), Gaps = 124/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 63 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 113 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 160 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 205
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 206 STQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 253
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T ++LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 254 T-----------------------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 289
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + ++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 290 MGTRLLTRWLNRPLRDLSILLARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 344
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A L +
Sbjct: 345 -------------IGLRNARPRDLARLRDALSALPELQQAMNDLDA-------PHLQQLA 384
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ + +N +I GGV YD+ ++ + + + L
Sbjct: 385 QTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 437
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P P DY R + KG R+ TP +K
Sbjct: 438 IDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPELK 497
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQFC 945
K L S+A + ++ +++L+ LIG
Sbjct: 498 EFEDKALSAKSRALAREKMLYETLLEDLIGHLA 530
>gi|398965115|ref|ZP_10680781.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM30]
gi|398147569|gb|EJM36273.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM30]
Length = 860
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 157/634 (24%), Positives = 264/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQVAMTDLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|114566506|ref|YP_753660.1| DNA mismatch repair protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318429|sp|Q0AYB5.1|MUTS_SYNWW RecName: Full=DNA mismatch repair protein MutS
gi|114337441|gb|ABI68289.1| DNA mismatch repair protein MutS [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 859
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 183/419 (43%), Gaps = 69/419 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ + K + D ++FF++G FYE+F DA + ++EL++ + P CG P
Sbjct: 9 QQYLQIKEEQQDAILFFRLGDFYEMFFEDARIASRELEIVLTARDGGAGSKIPMCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L +GY+V + EQ E P R+ KG +VKRE+ +VT GT+ E +L
Sbjct: 69 SVDNYLARLINRGYKVAICEQVEDP------REAKG----IVKREVTRIVTPGTIIEEQL 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L ++N A + C GI +D++T L ++ + S + +
Sbjct: 119 LDQ----------AKNNFLAAVEEEPLCTGIAYIDISTGEFWLSEIAGENARSRVESEIL 168
Query: 506 ELRPVE-IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P E ++ + L+ E LR L WD LE A
Sbjct: 169 RISPAECLLAGSGSLTGSWEEEWLRQQNITLT--------VWDELPLSLE--------RA 212
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
ESL VA+ ++ G L + + ++++ +FL+ET
Sbjct: 213 ESLLLRQLQVASLESFG---------LKSYSAGIKAAARII------------AFLEET- 250
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L + ++ +D + NLE+ R G G+L + L+ TA G
Sbjct: 251 ---QKTSLQHIKSLRCYSSDNFLEMDFYSRRNLELTATLREGKREGSLLSILDESRTAMG 307
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
KRLLR W+ +PL +G I ER DAV L+ E LSR+ D+ERL ++ AS
Sbjct: 308 KRLLRRWIEQPLREAGEIEERLDAVDELKN-TLSLRTELTPLLSRINDLERLGGKIGAS 365
>gi|424921686|ref|ZP_18345047.1| MutS [Pseudomonas fluorescens R124]
gi|404302846|gb|EJZ56808.1| MutS [Pseudomonas fluorescens R124]
Length = 860
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 157/634 (24%), Positives = 264/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQVAMTDLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|189030692|sp|A8MFD4.2|MUTS_ALKOO RecName: Full=DNA mismatch repair protein MutS
Length = 880
Score = 123 bits (309), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 197/435 (45%), Gaps = 80/435 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+R L+ +Q+ E K+++ D ++FF++G FYELF DA ++EL++ ++ +
Sbjct: 1 MRKLTPMMQQYMEIKNQYKDALMFFRLGDFYELFFDDAETASRELEITLTARDCGLESKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + ++KL KGY+V + EQ E P KG +VKR++ V+T
Sbjct: 61 PMCGVPYHAANGYIDKLVSKGYKVAICEQVEDPSV------AKG----IVKRDVVRVITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTL + LL + +YL++L S+ C G VD++T ++ +++
Sbjct: 111 GTLIDTNLLEDKKN-NYLVSLYMSSLG--------C-GFSYVDISTGELLSTEIVGTSIE 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAI-------LRHTRNPLVNDLVPLSEFWDAET 550
L +S++ P E+I E E I +R N ++ P + ++
Sbjct: 161 QNLIDEISKIEPNELIYFV-----EEEDKIGTNFIEGIRKKLNIHISKYDPWT--FEESY 213
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
+ +IKN +N +T ESL G L L ++A G
Sbjct: 214 AMNQIKNQFNILTVESL-------------GFSLNHLG----------------INATGA 244
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
+ YL KS TL K + + MVLD NLE+ E R + G
Sbjct: 245 LIHYL-KSTQKRTLSHINKINIYTFT--------EKMVLDISTRRNLELTETIRGKNKKG 295
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRL 730
+L L+ TA G R++R W+ PL N I R +AVA L+ + E +++L ++
Sbjct: 296 SLLWILDKTQTAMGGRMIRKWIEEPLLNIQNINRRLEAVATLKN-DILLRCELKESLKQI 354
Query: 731 PDMERLLARL-FASS 744
D+ERL ++ F S+
Sbjct: 355 YDLERLSGKIAFGSA 369
>gi|410089201|ref|ZP_11285827.1| DNA mismatch repair protein MutS [Pseudomonas viridiflava
UASWS0038]
gi|409763488|gb|EKN48448.1| DNA mismatch repair protein MutS [Pseudomonas viridiflava
UASWS0038]
Length = 859
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 153/636 (24%), Positives = 256/636 (40%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFER------------ 207
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ A ++ A D L G E+++ + A G L Y K++
Sbjct: 208 -----DSAHKSLCQQFATQD----LKGFGCEMLTLA------IGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LD + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VILDGASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA S L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMSEL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ +++ + + +
Sbjct: 397 ARTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKSRTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|337286407|ref|YP_004625880.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
gi|335359235|gb|AEH44916.1| DNA mismatch repair protein MutS [Thermodesulfatator indicus DSM
15286]
Length = 857
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 166/656 (25%), Positives = 284/656 (43%), Gaps = 130/656 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ E K K+ D ++FF++G FYE+F DA + ++ LD+ K + P CG P
Sbjct: 9 RQYLEIKEKYPDAILFFRLGDFYEMFFEDAELASRILDIALTSRDKGTKEKVPMCGVPAA 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
N + + +L GY+V + EQ E P+Q KG +VKRE+ VVT G + E
Sbjct: 69 NAAHYINRLVSAGYKVAICEQVEDPKQ------AKG----IVKREVIRVVTPGLNLDEET 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L++ D +L++L + +G+ +D++T + ++ + + +L+
Sbjct: 119 LTSK-DNRFLVSLFPG----------KAWGMAHLDLSTGDFKVTEIHSEEE------MLN 161
Query: 506 ELRPVEIIKPANMLSPET--ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
EL +E P +L PET + A+ R R + + + F +A+
Sbjct: 162 ELFRLE---PKEILLPETLKDSALERKIRELIPHIFISYRVFINAKQ------------R 206
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGD----SGSQVLSALGGTLFYLKKSF 619
AE L K VA+ G GL+ P L + D + +V S LG FY F
Sbjct: 207 AEELIKERYQVAD--LTGFGLSQAPAALCAAATLLDYVIETQKEVSSHLGVPKFYYLSQF 264
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
L ++D NLE+ N+ G G+L L+
Sbjct: 265 L---------------------------IIDEATKRNLEILRNNLDGSLKGSLLWVLDKT 297
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLA 738
+T G RLL+ WL PL N I R +AVA L V++P + R+ L+R+ D+ERL
Sbjct: 298 LTPMGGRLLKEWLLYPLRNLESIEARLEAVAYL--VDEPSKRKNLRELLARIADVERLTG 355
Query: 739 RLFASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTESRQ 796
R A AN R+ ++ +D+ K QL+E L ++ L AI EN
Sbjct: 356 RA-AMGVANPRD---LLALKDSLKMVPQLKEL--------LPEKISPLLDAIKEN----- 398
Query: 797 LHHILTPGKGLPAIVSILK-----HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
+L PG + + ++ +FK+ G +I GV + D +++K+
Sbjct: 399 ---LLVPGDLVQNLEKTIREEAPVNFKE----------GGVI-KDGVHEELDE-LRRLKD 443
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
S L+ + + T I + +G + Y +EV +S VP +Y + + G
Sbjct: 444 DALSFLAELETRER--ARTGIPNLKVGYNRVFGYYIEVSKSHLSKVPDNYIRKQTLVGGE 501
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ TP +K+ ++ A+ + + + + E + +++ A A L ++
Sbjct: 502 RFITPELKEFEAKVLSADERIKELEQELFLEIRKNVAEKAQELKKLARALATLDVL 557
>gi|289578351|ref|YP_003476978.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
gi|289528064|gb|ADD02416.1| DNA mismatch repair protein MutS [Thermoanaerobacter italicus Ab9]
Length = 866
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 157/601 (26%), Positives = 254/601 (42%), Gaps = 110/601 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + +
Sbjct: 118 MDEKTN-NYLVSVFKERDN---------YGICAVDVTTGDLYATEIKNCKDNKKVYDEII 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I + + N VN +++ ++ + IKN +N+ E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFK-SNNCAVNTYEK-KLYYEEKSKI--IKNQFNKKLEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K V NS L+ L L+EL T L + L Y S
Sbjct: 224 LGIKDKPYVVNS------LSTLFCYLNELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++++ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R AV L + + ++ L+++ D+ERL
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEELFN-DYKNRQDLKQLLNKIYDLERL--------- 354
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
S+K+V Y+ K +FIS +L Q + IL+ SR L I
Sbjct: 355 -----SSKIV-YQSINPK---DFIS----IKLSLQNLPYIKEILQRFSSRLLKDIYEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASVEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP Y + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPERYIRKQTLANAERYVTPELKE 511
Query: 918 L 918
+
Sbjct: 512 I 512
>gi|375084995|ref|ZP_09731788.1| DNA mismatch repair protein MutS [Megamonas funiformis YIT 11815]
gi|374567644|gb|EHR38853.1| DNA mismatch repair protein MutS [Megamonas funiformis YIT 11815]
Length = 912
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 166/638 (26%), Positives = 261/638 (40%), Gaps = 127/638 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-----PHCG 381
L+ +Q+ K+ H D+++FF++G FYE+F DA + +KEL+L K P CG
Sbjct: 3 LTPMMQQYQAVKNAHPDQILFFRLGDFYEMFLDDAILVSKELELTLTKRSTAGDGIPMCG 62
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL KGY+V + EQ P K KG + KRE+ ++T GT+
Sbjct: 63 VPYHAAESYINKLVNKGYKVAICEQIGDP-------KAKG----LTKREVIKIITPGTVM 111
Query: 442 EGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD-CSVL 500
L+++ + +Y+ + E N + D G C + D D C +L
Sbjct: 112 NESALTSSKN-NYITLIYEENHAIYLAGADISTGECFY----------SIYDGPDRCQLL 160
Query: 501 CCLLSELRPVE--IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L L E +IKP + E + + N LVN+L ++ E +L+ ++
Sbjct: 161 FDELYRLMMPELLLIKPFSY-EGELKNFLSLRLNNCLVNELTEITS--QVEDLMLQHFDV 217
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+NR D+ +A+ + L L E + T L+ L K +
Sbjct: 218 HNR--------PDNKIAHK-----AIATLLEYLHETVKTD------LTHLN------KLT 252
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+LD + F +D L NLE+ N R G TLY L+
Sbjct: 253 YLDSSKSLF---------------------IDTYTLRNLEITRNLRDGGKKDTLYDVLDF 291
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
TA G RLLR WL PL + I +R DAVA L N R+ L + D ERLL
Sbjct: 292 TKTAMGSRLLRKWLEYPLLSPKKINDRLDAVANLVS-NFSLRNNLREQLKEIYDFERLLT 350
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA-ILENTESRQL 797
R+ + AN R+ N + S+L+ + ++ S A +L N +
Sbjct: 351 RMEVGT-ANARDMNALK--------------SSLYVLPAIKKSLSKATAKLLAN-----I 390
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEAS- 855
H ++ L ++ D + I GG D Y+ + + I +
Sbjct: 391 HQKISTYDDLVVLI----------DKAIVEDPSFSIREGGFIKDGYNQELDEYRNIAKNS 440
Query: 856 --LTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRY 910
L + ++E K T I + IG + Y +EV S VP +Y + + RY
Sbjct: 441 KRLLQQMEEDEK--NKTGIKSLKIGYNKVFGYYIEVRHSSTEMVPENYIRKQTLANAERY 498
Query: 911 WTPNIK----KLLG---ELSQAESEKESALKSILQRLI 941
TP +K K+LG ++ Q E + L+ IL+ I
Sbjct: 499 ITPELKEFETKILGAQEKIVQLEYNLFTELRDILKTQI 536
>gi|398984071|ref|ZP_10690380.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM24]
gi|399011304|ref|ZP_10713636.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM16]
gi|398118046|gb|EJM07786.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM16]
gi|398156188|gb|EJM44612.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM24]
Length = 847
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 155/632 (24%), Positives = 269/632 (42%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 63 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRILTPGTVSDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 113 LDERRD----------NLIAALLGDERLFGLAVLDITSGSFSVSEIKG---WENLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 160 RINPVELLIPDDWPRDLPAEKRRGVSR--RAP-----------WDFERDS-ALKSLCQQF 205
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ S + A G L Y K++
Sbjct: 206 STQDLK--------------GFGC------------ENLSLAIGAAGCLLAYAKETQRTA 239
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 240 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 288
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 289 AMGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 345
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 346 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQGLA 384
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 385 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 437
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 438 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 497
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 498 EFEDKALSAKSRALAREKMLYEALLEDLISQL 529
>gi|379712152|ref|YP_005300491.1| DNA mismatch repair protein MutS [Rickettsia philipii str. 364D]
gi|376328797|gb|AFB26034.1| DNA mismatch repair protein MutS [Rickettsia philipii str. 364D]
Length = 886
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 189/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 135 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + D + GI G+ S + A+G L YL +
Sbjct: 220 FFAINKCKKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 261
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 262 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHTVTKQ 318
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 319 GGRLLYHFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 376
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 377 NRSSGRD 383
>gi|238482111|ref|XP_002372294.1| DNA mismatch repair protein Msh3 [Aspergillus flavus NRRL3357]
gi|220700344|gb|EED56682.1| DNA mismatch repair protein Msh3 [Aspergillus flavus NRRL3357]
Length = 1386
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 153/678 (22%), Positives = 280/678 (41%), Gaps = 86/678 (12%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
R L+ +KQ + K KHMD V+ ++G + F DA AKEL++ + G E P
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++V++L G++V VV Q ET + +++ R+
Sbjct: 256 EAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAAL----KAAGDNRNAPFGRK 311
Query: 431 ICAVVTKGTLT------EGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVV 479
+ + TKGT EG S + + Y++ +TE+N GI V
Sbjct: 312 LTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAV 371
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
AT I+ + D S + L L P E++ + LS TE+ + L +
Sbjct: 372 QPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGD-LSKATEKLVQHLSGNKTNAFG 430
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
D + + A+T E + + AE + K ++ + QA +L ++++
Sbjct: 431 DEIRVERAPKAKTAAAESHSHVSSFYAERMKKVNAT-NDVQASS--------LLQKVLNL 481
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
+ + LS++ + ++ + L E + + K+ F + + +M+L+A L +L
Sbjct: 482 SEQATICLSSM---IKHMSEYGL-EHVFQLTKY-------FQHFSSRSHMLLNANTLNSL 530
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
E++ N + G+L+ L+ T FG+R+LR W+ RPL N + ER DAV L+ + +
Sbjct: 531 EIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLER 590
Query: 718 PFALEFRKAL-SRL-PDMERLLARLFASS----EANGRNSNKVVLYEDAAKKQLQEFISA 771
+E K L R+ D+E+ L R++ E ++ ++ A +Q
Sbjct: 591 VALVEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAG--VQSPADT 648
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSG 830
L+ +A +SL ILE+ + L I D +++ E+ +
Sbjct: 649 GFSSPLISKAVASLPTILEDVV-----------RFLDKINMHAAKNDDKYEFFRESEETD 697
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE-- 888
I H + +E L +H ++LG + YVT+ YL+ V
Sbjct: 698 EITEHK----------LGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKS 747
Query: 889 -SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
S++ VP + S K R+ TP + +LL + Q + + + +
Sbjct: 748 PSIK-KVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISAS 806
Query: 948 HNKWRQMVAATAGLTLIL 965
+ +R V + A L ++
Sbjct: 807 YQSFRDSVQSLATLDCLI 824
>gi|440737287|ref|ZP_20916859.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens
BRIP34879]
gi|440382266|gb|ELQ18771.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens
BRIP34879]
Length = 863
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 156/635 (24%), Positives = 265/635 (41%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLSGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLSVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L A + ++ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQAAMTELDTPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YDS +++ + + + L
Sbjct: 398 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LI +
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISRLA 543
>gi|34580662|ref|ZP_00142142.1| DNA mismatch repair protein MutS [Rickettsia sibirica 246]
gi|28262047|gb|EAA25551.1| DNA mismatch repair protein MutS [Rickettsia sibirica 246]
Length = 886
Score = 123 bits (308), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 190/431 (44%), Gaps = 77/431 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEANYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 135 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL----KKSF 619
++NK + + + D + GI G+ S + A+G L YL K++
Sbjct: 220 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYLSLTQKQNI 268
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ R KF YM +D NLE+ +S+ G S G+L + LNH
Sbjct: 269 PHLPIPRIIKFH-------------SYMTIDFSTRRNLEIVTHSQGG-SQGSLLSTLNHT 314
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G RLL +L+ PL N I R + N + R+ L + D+ER L R
Sbjct: 315 VTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTR 373
Query: 740 LFASSEANGRN 750
+ + ++GR+
Sbjct: 374 I-TMNRSSGRD 383
>gi|422404657|ref|ZP_16481708.1| DNA mismatch repair protein MutS, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878038|gb|EGH12187.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 532
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 151/636 (23%), Positives = 256/636 (40%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 63 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 113 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 160 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 205
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 206 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 239
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + ++LDA + NLE+ + + SG TL + ++ C T
Sbjct: 240 LPHLRSLRHERLDDT----------VILDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQT 288
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 289 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 344
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L E+ L +
Sbjct: 345 --------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQL 383
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 384 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 436
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 437 LIDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 494
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 495 ELKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 530
>gi|322701080|gb|EFY92831.1| DNA mismatch repair protein msh3 [Metarhizium acridum CQMa 102]
Length = 1098
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 152/660 (23%), Positives = 270/660 (40%), Gaps = 64/660 (9%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KH+D ++ ++G + F DA AKEL + + G E P
Sbjct: 196 LTPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARTAAKELGIVCIPGKMRYDEHPSEA 255
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P S++ ++L G++V VV Q ET +K +++ R++
Sbjct: 256 HLDRFASASVPVHRLSVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNTPFIRKLT 311
Query: 433 AVVTKGTLTE--GEL---LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
V TKGT + GEL P YL+ +TE+ + GI V AT II
Sbjct: 312 NVYTKGTYIDEVGELDQQAEGAPAGGYLLCITETKSKGSGTDEKVDVGILAVQPATGDII 371
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWD 547
D S + L + P E + + L+ T++ +++H N S
Sbjct: 372 YDNFEDGFMRSEIETRLLHISPCEFLIVGD-LTRGTDK-LVQHLSGSSTNVFGDRSRVER 429
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
Y+ +T +K N A +L +++ + + LSA
Sbjct: 430 VPRPPTMAAEAYSHVTQFYADKLKDTSQNETASA--------LLDKVLKLPEPVTICLSA 481
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + +LK+ L E + K+ F + +M+++ LE+LEV+ NS
Sbjct: 482 M---INHLKEYGL-EHIFDLTKY-------FQSFTTRSHMLVNGTTLESLEVYRNSTDHA 530
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
G+L+ L+ +T FG+RLLR W+ RPL + + ER AV L +++
Sbjct: 531 ERGSLFWALDKTLTRFGQRLLRKWVGRPLLDQDRLEERLAAVEELLN---------KQST 581
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGA 787
+ + D+E+LL A+++ + S + Y + +L +S L + + SS+ +
Sbjct: 582 APVDDLEKLL----ATTKIDLERSLIRIYYGKCTRPEL---LSVLQTLQKIATHYSSIKS 634
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR--IIPHGGVDMDYDSA 845
N S L + T LP I++ + + + + A + D
Sbjct: 635 PSSNPFSSPL--LATSINALPQILNTVVSYLERINLEAARKDDKYAFFREEYQTEDIQDQ 692
Query: 846 CKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ +E L +HLK L + YVT+ +L+EVP S +VP + S K
Sbjct: 693 QMGIAHVEHELGEHLKVAAAKLKKKKVDYVTVAGIEFLIEVPNSDIKNVPASWSKISGTK 752
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ TP + +++ E Q +A + L+ + + R V++ A L +L
Sbjct: 753 KVSRFHTPEVMRMISERDQHREALAAACDKAFKNLLAEISSDYQPLRDAVSSLASLDCLL 812
>gi|398913781|ref|ZP_10656640.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM49]
gi|398179866|gb|EJM67465.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM49]
Length = 859
Score = 123 bits (308), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 156/633 (24%), Positives = 265/633 (41%), Gaps = 126/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
T P + ++L+ K D N +I GGV YDS +++ + + +
Sbjct: 397 ATITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYVRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQF 944
K K L S+A + ++ +++L+ LI Q
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|297544629|ref|YP_003676931.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842404|gb|ADH60920.1| DNA mismatch repair protein MutS [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 866
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 254/601 (42%), Gaps = 110/601 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 8 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 68 AADFYIDKLIKKGYKVAICEQLEDP------AKAKG----LVKRDVVRIYTPGTIINPES 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + + +GIC VDV T + ++ + D + +
Sbjct: 118 MDEKTN-NYLVSVFKERDN---------YGICAVDVTTGDLYATEIKNCKDNKKVYDEII 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII + L I + + N VN +++ ++ ++E N +N+ E
Sbjct: 168 KYAPSEIIANEDFLKNNKYIKIFK-SNNCAVNTYEK-KLYYEEKSKIIE--NQFNKKLEE 223
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
K V NS L+ L L+EL T L + L Y S
Sbjct: 224 LGIKDKPYVVNS------LSTLFCYLNELQKTA------LKHINKLLIYEDNS------- 264
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
YM LD+ A++NLE+ E++++ G+L L+ VT G
Sbjct: 265 --------------------YMGLDSNAIKNLEILESNKNKSKKGSLLGVLDKTVTPMGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL N I R AV L + + ++ L+++ D+ERL
Sbjct: 305 RLLKKWLEEPLLNKEHIDARLQAVEELFN-DYKNRQDLKQLLNKIYDLERL--------- 354
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
S+K+V Y+ K +FIS +L Q + IL+ SR L I
Sbjct: 355 -----SSKIV-YQSINPK---DFIS----IKLSLQNLPYIKEILQRFSSRLLKDIYEKFD 401
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS----LTKHL 860
L I ++ K KD D G II G Y+ K+++ +
Sbjct: 402 TLQDIYELIDKSIKD--DPSTQLKEGNIIKDG-----YNETVDKLRKASVEGKNWIANLE 454
Query: 861 KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
E+R+ T I + IG + Y +EV +S VP Y + + RY TP +K+
Sbjct: 455 AEERE---KTGIKNLRIGYNKVFGYYIEVTKSNIPQVPEKYIRKQTLANAERYVTPELKE 511
Query: 918 L 918
+
Sbjct: 512 I 512
>gi|171687199|ref|XP_001908540.1| hypothetical protein [Podospora anserina S mat+]
gi|170943561|emb|CAP69213.1| unnamed protein product [Podospora anserina S mat+]
Length = 1118
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 156/660 (23%), Positives = 267/660 (40%), Gaps = 79/660 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG----EQPH------CGF 382
Q+ + K KHMD ++ ++G ++ F DA + AKEL + + G ++PH
Sbjct: 218 QFLDIKRKHMDTLLIVEVGYKFKFFGEDARIAAKELSIVCIPGKFRYDEPHLDRFASASV 277
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
P +++ ++L G++V VV Q ET +K +++ R++ V TKGT +
Sbjct: 278 PVHRLNVHAKRLVAAGHKVGVVRQVETAAL----KKAGDNRNAPFVRKLTNVYTKGTYID 333
Query: 443 --GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GEL + P YL+ LTES + GI V AT II D
Sbjct: 334 ETGELDQPGDTTGAPSGGYLLCLTESPTKGSGTDEKVQVGIIAVQPATGDIIYDDFEDGF 393
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRH---TRNPLVNDLVPLSEFWDAETTV 552
+ L + P E + + LS +++ I++H +R + D + ++T
Sbjct: 394 MRREMETRLLHISPCEFLIVGD-LSKASDK-IVKHLSGSRTNVFGDRSRVERVPKSKTMA 451
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E + + A+ + D N A +L +++ +S + LSA+ +
Sbjct: 452 AEAHSHVTQFYADKTKEDDENSA-------------ALLEKVLKLPESVTICLSAM---I 495
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+L + L + + K+ F + + +M+++ LE+LEV+ NS G+L
Sbjct: 496 NHLTEYGL-QHIFGLTKY-------FQSFSTRQHMLVNGTTLESLEVYRNSTDHSEKGSL 547
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP- 731
L+ T G+RLLR W+ RPL + + ER AV L + + A++ K L
Sbjct: 548 MWALDKTQTRPGQRLLRKWIGRPLLDQQRLEERVTAVEEL--LEKQSAIQVSKLTGMLAS 605
Query: 732 ---DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAI 788
D+ER L R++ Y + +L + L + S
Sbjct: 606 IKADLERSLIRIY---------------YGKCTRPELLSTLQTLQKIAMEYHRVKSPAET 650
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
+S L L LPAI I+ + D + A + + D K
Sbjct: 651 --GFKSSLLQETLL---SLPAIGDIVTSYLDKINAQAARKDDKYNFFREEEETDDITDHK 705
Query: 849 --VKEIEASLTKHLKEQR-KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ +EA L + KE KL + Y T+ YL+EV + +VP + S K
Sbjct: 706 LGIAAVEADLDAYRKEATAKLKKKVLVEYTTVSGIEYLIEVANTDLKNVPASWAKTSGTK 765
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ TP + KL+ E Q +A + L+ + R V++ A L +L
Sbjct: 766 KVSRFHTPEVIKLISERDQHREALAAACDAAFSALLSSLAAEYQPLRDAVSSLATLDCLL 825
>gi|398976864|ref|ZP_10686674.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM25]
gi|398138747|gb|EJM27761.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM25]
Length = 860
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 156/634 (24%), Positives = 264/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFENLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
+ P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 STTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|229588703|ref|YP_002870822.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens SBW25]
gi|259511173|sp|C3KCT2.1|MUTS_PSEFS RecName: Full=DNA mismatch repair protein MutS
gi|229360569|emb|CAY47426.1| DNA mismatch repair protein [Pseudomonas fluorescens SBW25]
Length = 863
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 153/634 (24%), Positives = 254/634 (40%), Gaps = 126/634 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 SVQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALPH----------LRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLD + NLE + + +G TL + ++ C TA
Sbjct: 267 T-----------------------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 303 MGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILAR--- 357
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ +A + L AL + A + L ++ L +
Sbjct: 358 ------------IGLRNARPRDLARLRDALGALPQLQVAMTEL-------DTPHLQQLAV 398
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + ++L+ K D N II GGV YDS +++ + + + L
Sbjct: 399 TAGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFLI 451
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP +
Sbjct: 452 DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFC 945
K K L S+A + ++ +++L+ LI Q
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLISQLA 543
>gi|422679967|ref|ZP_16738240.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
gi|331009314|gb|EGH89370.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 859
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 254/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 219 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A H+
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDLEA----------PHL- 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
+ L SI D +N +I GGV YD+ ++ + + + L
Sbjct: 394 ---QQLAQTASIYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|381160090|ref|ZP_09869322.1| DNA mismatch repair protein MutS [Thiorhodovibrio sp. 970]
gi|380878154|gb|EIC20246.1| DNA mismatch repair protein MutS [Thiorhodovibrio sp. 970]
Length = 907
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 173/637 (27%), Positives = 266/637 (41%), Gaps = 103/637 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K++H D ++F++MG FYELF DA A+ LD+ K Q P G P
Sbjct: 3 QQYLRIKAEHPDMLLFYRMGDFYELFFEDAERAARLLDITLTKRGQSAGKPIPMAGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L R+G V + EQT P K KG D RE+ +VT GTLT+ L
Sbjct: 63 AAESYLARLVRQGVSVAICEQTGDPA------KSKGPVD----REVVRIVTPGTLTDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDR---CFGICVVDVATSRIILGQVMDDLDCSVLCC 502
L + +S +P +D FG+ +++A+ R L L+ S L
Sbjct: 113 LDQRRENLLCAVAEQSLPAPTEGESDSRALAFGLASLELASGRFTL------LELSGLEA 166
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV--PLSEFWDAETTVLEIKNIYN 560
L +EL E ++PA +L E R L + L P F DA++
Sbjct: 167 LSAEL---ERLQPAELLLDEDSLLD---KRLALGSGLARRPAWHF-DADSA--------E 211
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-----LSALGGTLFYL 615
R+ E D + G C G+ + + DS S + A G L Y+
Sbjct: 212 RMLCEQFGTRDLS---------GFGC-GGVDTGSGAATDSRSNTGLRLAVGAAGCLLQYV 261
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K + + L G + ++LDA NLE+ + + SG TL A
Sbjct: 262 KDT---------QRAALPHLRGLTVEQRDQAVILDAATRRNLELTQ-TLSGQEGHTLAAI 311
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
+++ TA G RLLR WL RPL + +R R DA+A L + R+ LS + D+ER
Sbjct: 312 MDNTRTAMGARLLRRWLNRPLRDVHDVRLRHDAIATL--IETARGEPLRETLSAIGDLER 369
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAK--KQLQEFISALHGCELMDQACSSLGAILENTE 793
+LAR+ A A R+ + DA +L + ++AL L+ LG E +
Sbjct: 370 ILARV-ALGSARPRD---LATLRDALGLLPELHQSLAALD-SPLLTSLDQDLGDHPEVRD 424
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
Q I P P ++ +D E + + HG + + E+E
Sbjct: 425 LLQRALIEQP----PMLIRDGSVLAPGYD-AELDELRNLAEHGD---------QFLLELE 470
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
A + +R + ++Y + Y +E+ + VP DY+ R + KG RY TP
Sbjct: 471 AR-----ERERTGIPALKVSYNRVHG--YYIEIGRTHSDKVPDDYQRRQTLKGVERYITP 523
Query: 914 NIKKLLGELSQAESEKESAL---KSILQRLIGQFCEH 947
+K+ QA S +E AL K + L+ Q H
Sbjct: 524 ELKRF---EDQALSARERALAREKMLYDELLAQLIAH 557
>gi|422594836|ref|ZP_16669126.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|330985143|gb|EGH83246.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 859
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 254/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 219 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L A H+
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDLEA----------PHL- 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
+ L SI D +N +I GGV YD+ ++ + + + L
Sbjct: 394 ---QQLAQTASIYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|435852399|ref|YP_007313985.1| DNA mismatch repair protein MutS [Methanomethylovorans hollandica
DSM 15978]
gi|433663029|gb|AGB50455.1| DNA mismatch repair protein MutS [Methanomethylovorans hollandica
DSM 15978]
Length = 886
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 161/651 (24%), Positives = 263/651 (40%), Gaps = 104/651 (15%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGE---- 376
+ ++ Q++ K ++ D +IFF+MG FYE F DA A+EL++ KGE
Sbjct: 1 MSKMTPAMHQYYTAKKEYSDALIFFRMGDFYESFGEDAKTIARELEITLTTRGKGEDGKN 60
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + +L RKGY+V + EQ E P+ VVKR + VVT
Sbjct: 61 MPLAGIPYHAIDTYLPRLIRKGYKVAICEQLEDPKL----------AKGVVKRGVVRVVT 110
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT + + S + +YLMAL+ N FG+ +DV+T + Q D+
Sbjct: 111 PGTAIDPSMFS-DATNNYLMALSGKNGD---------FGVSFLDVSTGEFMATQFSDESP 160
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
+ ++ + P E I P ++ E H L V + EF +
Sbjct: 161 FDRIASEVARMLPAECIVPLHLYGNE-------HLMQRLEELKVIVHEFDEMAFD----- 208
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
T + + S EG G LP Q ++A G L Y
Sbjct: 209 ------TTNAREHLKQHFGVSTLEGMGCDTLP--------------QAIAAAGAALNYAI 248
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
T +R EL ++ +M+LD+ L NLE+ N R + +L L
Sbjct: 249 T-----TQMR----ELGHVQSLSTYSESEFMILDSITLRNLEIVHNVRGEGNDTSLLKIL 299
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ T G R+L+ WL +PL + I ER DAV L G + R L+ + D+ERL
Sbjct: 300 DQTSTPMGGRMLKKWLLKPLISVSEINERLDAVEELSG-KTLVRFDVRSHLAYVKDIERL 358
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
+ R V+Y ++ + L ++ L+ Q ++ SR
Sbjct: 359 VGR---------------VMYGNSNARDLVALKLSMEAVPLLIQCVG------DDVSSRL 397
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDW---VEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
+ I+ +G + S+++ A + G I P Y++ K+K++
Sbjct: 398 IRDIIEELQGFEELNSLVELIGKAIAEEPPLSVREGGMIRP------GYNTELDKLKDLS 451
Query: 854 ASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
+ K + + Q+K T I + +G + Y LEV S VP DY + + R
Sbjct: 452 HNGKKWVADFQQKERERTGIKSLKVGYNRVFGYYLEVTSSNSSQVPDDYIRKQTMVNAER 511
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG 960
++TP +K++ + A+ EK AL+ L + +++ Q A G
Sbjct: 512 FYTPELKEMETSILTAD-EKAHALEHELLNEVNATVASYSRQLQRAAFLIG 561
>gi|379772220|gb|AFD18710.1| DNA mismatch repair protein [Pseudomonas fluorescens]
Length = 860
Score = 122 bits (307), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 156/634 (24%), Positives = 263/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFENLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQVAMADLEAPHLQRLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 ATTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|379023126|ref|YP_005299787.1| DNA mismatch repair protein MutS [Rickettsia canadensis str. CA410]
gi|376324064|gb|AFB21305.1| DNA mismatch repair protein MutS [Rickettsia canadensis str. CA410]
Length = 886
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 188/420 (44%), Gaps = 68/420 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCG 381
++ +Q+ + K H+D ++ F+MG FYE+F DA + +K L + K GE+ P CG
Sbjct: 16 TKMMQQYLDIKFAHLDCLLLFRMGDFYEMFYEDATIASKVLGIALTKRGKNGEEEIPMCG 75
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL ++ +++ + +Q ETPE+ K KG V+ R++ ++T GT+
Sbjct: 76 IPYHALENYLTKLIKENHKIAICDQLETPEE----AKNKGGYKAVISRDVTRIITPGTII 131
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E + A+ + +YL +L N+ AS +C VD++TS I + V + + +
Sbjct: 132 EENFI-ASDEPNYLASLVIPQNKETAS--------LCYVDLSTSEIFVVNVPE----AEI 178
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+P EI+ N+ S S D NI+
Sbjct: 179 LNELARLKPREILLSENLRS----------------------SNLAD---------NIFK 207
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
++ + DS A ++ E L + ++ G+ S + +G L YL
Sbjct: 208 QLNFRITYQVDSFFAVNKCEKIILDFYK--MKDIKGIGEISSGQICTIGSILEYL----- 260
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ NS+ G S G++ + +NH V
Sbjct: 261 --SLTQKQNIPHLPIPRIINF--HSYMAIDVATRRNLEIVTNSQGG-SKGSVLSTINHTV 315
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL + I R + + N + R+ L R+ D+ER L R+
Sbjct: 316 TKQGGRLLYNFLSSPLTDITKINHRLN-ITDFFYSNPAIVSKIREYLKRISDIERCLTRI 374
>gi|269121342|ref|YP_003309519.1| DNA mismatch repair protein MutS [Sebaldella termitidis ATCC 33386]
gi|268615220|gb|ACZ09588.1| DNA mismatch repair protein MutS [Sebaldella termitidis ATCC 33386]
Length = 868
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 157/650 (24%), Positives = 265/650 (40%), Gaps = 118/650 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KG-EQPHCGFPER 385
KQ+ E K H D ++FF++G FYE+F DA +KEL L KG + P G P
Sbjct: 8 KQYREIKENHQDSILFFRLGDFYEMFFQDAVTASKELGLTLTSRNKEKGMDVPLAGIPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + + KL KGY+V + EQ E P R KG +VKRE+ +VT GT+ + +
Sbjct: 68 SSASYITKLVNKGYKVAICEQVEDP------RTVKG----IVKREVVKIVTPGTVIDVDS 117
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A + +YL+++ + D GI +D+ T + ++ DD D S L
Sbjct: 118 LDATSN-NYLLSV---------KHLDNKTGIAYLDITTGEFKVLEIEDDSDYSKTFNELY 167
Query: 506 ELRPVEIIKPANMLSPETER----AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
++ P EI+ N ++ + ++ LVN L F + + +N
Sbjct: 168 KIEPKEILVEFNFYEALKDKFDDYSKKIDSKVTLVNKLRDPENF---------LTDYFNI 218
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
++ ES +++ A A G+ IL +S G
Sbjct: 219 VSLESFGISEAKAAVHAA---GM-----ILDYALSMQVDGD------------------- 251
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
L K E + + F + +++ NLE+ N R S GTL L+ C T
Sbjct: 252 ---LPLEKIEYINITNFAE--------INSTTRRNLELTRNQREKTSYGTLLWVLDKCKT 300
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
+ G R L+ + PL I++RQD + N E ++ L + D+ERL ++
Sbjct: 301 SMGTRFLKKIINNPLLEIEEIKKRQDDLQYFMD-NILIREEIKEKLGEVYDLERLAGKIV 359
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+E NG++ A KK + IS+L + + + G ++ Q+ I+
Sbjct: 360 LGNE-NGKDLT-------ALKKSI---ISSLEIMDFLRETAFFTG--IDTKTLTQIRDII 406
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLK 861
A SI G II G Y+ ++ +I +S +L
Sbjct: 407 EESIKEDAPFSI--------------REGNIIKRG-----YNQELDEIFKIMSSGKDYLL 447
Query: 862 E------QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
E +R + + I Y + Y LEV S + VP DY + + RY T +
Sbjct: 448 EIEAREKERTGIKNLKIKYNKVFG--YFLEVSNSNKDLVPEDYIRKQTLSNAERYITEEL 505
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
K+ ++ ++S+ E + + + G+ E ++ A L +I+
Sbjct: 506 KEYEDKIINSKSKVEEIEYYLFKEISGKIKEKREVLNKLSEILAYLDVII 555
>gi|291522251|emb|CBK80544.1| DNA mismatch repair protein MutS [Coprococcus catus GD/7]
Length = 882
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 181/424 (42%), Gaps = 78/424 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PH 379
L+ +Q+ K ++ D ++F+++G FYE+F DA ++EL++ + G+ P
Sbjct: 4 LTPMMQQYMAIKEQYKDCILFYRLGDFYEMFYDDALTASRELEIT-LTGKNCGQEERAPM 62
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P + + KL KGY+V + EQ E P+Q KG +VKRE+ +VT GT
Sbjct: 63 CGVPYHAVDVYLNKLVAKGYKVAICEQAEDPKQ------AKG----IVKREVIRIVTPGT 112
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ L + +YLM L N FG+ + D++T +V +
Sbjct: 113 NLSQQALDEGRN-NYLMCLVYDNNQ---------FGLAITDISTGDFYTTEV------AT 156
Query: 500 LCCLLSELR---PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
L L E+ P EII + L +F D +
Sbjct: 157 LKELYDEIHRFSPSEII-----------------CNDSFYMSGASLDDFKDRLHVSVSTL 199
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + A S+ K + + +G GLT P SG+ + AL L+ +
Sbjct: 200 DTWYMDEAVSVQKIKEHFKVASLDGLGLTDFP-----------SGTLAVGALLLYLYETQ 248
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
K+ LD ++ P G YM++D+ NLE+ E R G+L L
Sbjct: 249 KNTLDNLT------KITPYRSGG------YMIIDSATNRNLELIETLREKQKKGSLLWVL 296
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ TA G RL+R W+ +PL I RQDAV L + E R+ L+ + D+ERL
Sbjct: 297 DKTKTAMGARLMRNWIEQPLIEKKKITARQDAVEELYN-DMITREEIREYLNAVYDLERL 355
Query: 737 LARL 740
+ R+
Sbjct: 356 VTRI 359
>gi|398849382|ref|ZP_10606123.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM80]
gi|398250867|gb|EJN36158.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM80]
Length = 860
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 154/632 (24%), Positives = 269/632 (42%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRILTPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 126 LDERRD----------NLIAALLGDERLFGLAVLDITSGSFSVSEIKG---WENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPRDLPAEKRRGVSR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQGLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 511 EFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|195162754|ref|XP_002022219.1| GL25757 [Drosophila persimilis]
gi|194104180|gb|EDW26223.1| GL25757 [Drosophila persimilis]
Length = 945
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 142/283 (50%), Gaps = 23/283 (8%)
Query: 701 LIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEA--NGRNSNKVV 755
+++ERQ A+ L + P L E R L+ +PD ER LA+ LF + + G ++ +
Sbjct: 383 ILKERQAAIGEL--LRLPSELQEMRALLAPMPDFERNLAQIHLFGNKQVKQTGHPDSRAI 440
Query: 756 LYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTES---RQLHHILTPGKGLPAI 810
L+E+ K++L F++ L G A + L + + E+ +++ + T G P +
Sbjct: 441 LFEEKIYNKQKLVGFMAVLKGF----NALTKLPLMFQQCETPLIKRITQLTTSGGSFPDL 496
Query: 811 VSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDT 870
L++F AFD A +G I P G+D +YD +++EIE L +L EQ + G
Sbjct: 497 SEELRYFSTAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIEEIEKRLKTYLVEQERHFG-C 555
Query: 871 SITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLGELSQAES 927
+TY K Y L+VPES + Y L KG RY T K LL ++ QAE
Sbjct: 556 RVTYFGSDKKRYQLDVPESHAHKANKSYALEGQTKGKKPSRRYTTAETKGLLKDMQQAED 615
Query: 928 EKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSL 970
K + LK + +RL +F H+ +W+Q + A L ++ GSL
Sbjct: 616 AKNAVLKDLARRLFEKFSNHYEQWKQCIDCVANLDVL---GSL 655
Score = 103 bits (257), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 126/296 (42%), Gaps = 47/296 (15%)
Query: 187 EDEISDDRSDSSDDDWNKNVGKEDVSEDEEVDLVDEQENKVLRGRKRKSSGVKKSKSDGN 246
ED+ S D SD D GK+D + +E DE E + KKS++
Sbjct: 112 EDDFSGDESDYEPD------GKDDAASEESESGDDEGEEPMDDEESEDDPTPKKSRNKDK 165
Query: 247 AVNADFKSPIIKPVKIFGSDKLSNGFDNPVMGDVSERFSAREA---------------DK 291
N + P+ + VK+ N + +V + + E K
Sbjct: 166 NHNNNNNEPVGQKVKLAEGSTFQEKLKN-IQSNVKQDAAYDEIVTTSSSLDEPVVWPHQK 224
Query: 292 FHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
FL PD+ +D + RRP YD TL++P FL NLS G +QWW KS + D V+FFK+
Sbjct: 225 LEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNNLSPGVRQWWVLKSNNFDCVLFFKV 284
Query: 351 GKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETP 410
GKFYEL+ DA VG EL YM+GE V L + VE TET
Sbjct: 285 GKFYELYHGDADVGVNELGFTYMRGE--------------VLSLVDR------VEPTETA 324
Query: 411 EQLELR--RKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD--ASYLMALTESN 462
++ R R + D +EIC + GT GE P Y++ L + +
Sbjct: 325 HEVAQRCERVKYTQLDADEAQEICQITNLGTQVLGEQSKIRPHLPLCYMLGLVDCD 380
>gi|148668642|gb|EDL00961.1| mCG131439, isoform CRA_c [Mus musculus]
Length = 960
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 136/566 (24%), Positives = 241/566 (42%), Gaps = 74/566 (13%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + G+ V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSVP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEILQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ P ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIVEA---PELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 679
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTI 877
+ S+ L+E RK+L S+ YVT+
Sbjct: 680 VIHSIQMRLQEFRKILKLPSLQYVTV 705
>gi|170744569|ref|YP_001773224.1| DNA mismatch repair protein MutS [Methylobacterium sp. 4-46]
gi|168198843|gb|ACA20790.1| DNA mismatch repair protein MutS [Methylobacterium sp. 4-46]
Length = 962
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 191/421 (45%), Gaps = 78/421 (18%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHCGFPERN 386
Q+ E KS + ++F++MG FYELF DA + ++ L + ++ + P CG P
Sbjct: 68 QYIEIKSANPGLLLFYRMGDFYELFFEDAEIASRALGIVLTRRGKHAGADIPMCGVPIDR 127
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+++L G+RV V EQTE P + K++G+K V + E+ +VT GT+TE LL
Sbjct: 128 ADDYLQRLIALGHRVAVCEQTEDPAEA----KKRGAKSVVRR-EVVRLVTPGTITEERLL 182
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A+ L+AL S T +GI VD++T R L +V D + L L+
Sbjct: 183 D-PARANLLVALARRRAS----ETGWTYGIAAVDISTGRFTLSEV----DGAGLAAELAR 233
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L P EI+ A + + + L+ W ++ +T
Sbjct: 234 LDPREIVV-AEAIHADPD-----------------LARLW---------RDTSASVTPLG 266
Query: 567 LNKAD-SNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+AD ++ + E G+ L G G G ++A G L Y+ ++ L
Sbjct: 267 RGEADPASAERALREQFGVATLDGF-------GAFGRAEVAAAGTVLHYIARTQLG---- 315
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
AK L P + A +++DA NLE + SG+ +G+L A ++ V A G
Sbjct: 316 --AKVPLGPPA---RHAAGGTLLIDAATRANLE-LTRTLSGERAGSLLAAIDRTVGAAGA 369
Query: 686 RLLRTWLARPLYNSGLIRERQDAVA------GLRGVNQPFALEFRKALSRLPDMERLLAR 739
RLL LA P + LIR RQDAVA GLR E R L+R PDM R L+R
Sbjct: 370 RLLAERLASPSTDLALIRRRQDAVAFLVAEGGLRA-------ELRADLARAPDMARALSR 422
Query: 740 L 740
+
Sbjct: 423 V 423
>gi|303391044|ref|XP_003073752.1| MutS-like DNA mismatch repair protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302900|gb|ADM12392.1| MutS-like DNA mismatch repair protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 925
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 154/323 (47%), Gaps = 34/323 (10%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
MV+D L N+E+F+N+ +G TL+ ++ T FG+RLLR W+A PL I +RQ
Sbjct: 391 MVVDDATLRNMEIFKNNYNGTGEKTLFKAIDFSSTPFGQRLLRRWIAAPLVRREDIAKRQ 450
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
+ + V + AL+R+ D ERLL RLF NG + K L
Sbjct: 451 ETARMFKEVEVS---NLKNALARIGDGERLLTRLF-----NG----------NPGTKDLN 492
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS-ILKHFKDAFDWVE 825
+FI L C +A L L+ +S ++ + +S +L+ + +D E
Sbjct: 493 KFIRCLDACR---EAGDVLVQTLKGQKSDSAESMVAKAEEFSREISKVLEWHRKIYDVSE 549
Query: 826 ANNSGRIIPHGGVDMDYDSAC---KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
I P + D D C K+ +EIE L ++L+EQ+ L SI + +GKD++
Sbjct: 550 TE----ISPG---EEDGDELCQLMKERREIEEGLNEYLREQKARLKCQSIKFKDVGKDIF 602
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EV + + VP DY + SS KG RY+T ++K L+ + E + + S+L+R I
Sbjct: 603 QMEVAKETK--VPSDYFIMSSTKGTNRYYTRDLKNLVERYVECEEKIFQSKGSLLRRAID 660
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
H +RQM A + L
Sbjct: 661 VLLPHVVFFRQMFWELANVDCYL 683
Score = 107 bits (267), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 22/251 (8%)
Query: 291 KFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKM 350
++ FL D RD RR G+ YDP TL +P + +KQ+W+ K H D ++FFK
Sbjct: 95 RYKFL-EDIRDRNGRRVGEEGYDPSTLLIPKSEYNRFTPFEKQFWDIKKDHFDTIVFFKK 153
Query: 351 GKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
GKFYEL+E DA +GAK DL+ + GFPE + K GY++ V+Q+E
Sbjct: 154 GKFYELYENDALIGAKLFDLRITDRVNMKMSGFPESSLDYWTRKFLENGYKIARVDQSEN 213
Query: 410 PEQLELRRKE---KG-----SKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTES 461
++R ++ KG +KDK+++RE+ ++T+GT+ + + ++ YLM++
Sbjct: 214 MIGKQIRERDELSKGVEGRMAKDKIIRRELKEIITQGTIYNIDYMKSSI-PMYLMSVATD 272
Query: 462 NQSPASQSTDRCFG-----ICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPA 516
A ++C G + + D + + DD + +LS+ E+I A
Sbjct: 273 EICYA----EKCNGEIHTSVLLYDASIGEVYFSSFCDDRARHGIKTILSQHDVREMI--A 326
Query: 517 NMLSPETERAI 527
+ P R +
Sbjct: 327 DFTIPGIPRVV 337
>gi|298157251|gb|EFH98336.1| DNA mismatch repair protein MutS [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 859
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/635 (23%), Positives = 255/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 219 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L E+ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|225871419|ref|YP_002747366.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
gi|254766638|sp|C0MAS5.1|MUTS_STRE4 RecName: Full=DNA mismatch repair protein MutS
gi|225700823|emb|CAW95529.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
Length = 851
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 163/651 (25%), Positives = 265/651 (40%), Gaps = 125/651 (19%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NVSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQILEIGLTSRNKNADNPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L G++V + EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPYHSVQQYIDVLIDLGHKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ S+ PD+ +N A + +G+ +DV+T D D +
Sbjct: 115 AVD----SSRPDSP-------NNFLVAVDFDGKAYGLSYMDVSTGEFF---ATDLADFAS 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + L+ E++ + E E+AIL N L++ E T LE
Sbjct: 161 VKSEIQNLKAKEVLLGFEL--SEEEQAILVKQLNLLLS----------FEMTALE----- 203
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
DS + + Q LT + LSA G L Y+
Sbjct: 204 -----------DSPLIDHQ-----LTAVE----------------LSAAGKLLHYVH--- 228
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+T LR EL K Y+ + +L++ EN+R+G G+LY L+
Sbjct: 229 --QTQLR----ELSHLQALVHYDIKDYLQMSYATKSSLDLLENARTGKKHGSLYWLLDET 282
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDM 733
TA G RLLR W+ RPL S I ERQ+ + Q F F + +L + D+
Sbjct: 283 KTAMGMRLLRAWIDRPLVTSEAILERQEII-------QVFLNAFIERTDLSDSLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL +R+ + G+ + K +L QL ++ + AILE
Sbjct: 336 ERLSSRV-----SFGKANPKDLL-------QLGHTLA----------KVPYIKAILEAFN 373
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L ++ LP + +++ D D N G II G D D K ++E
Sbjct: 374 SPYLDKLVNQIDTLPELEHLIRSAIDP-DAPATINEGNII-RTGFDERLDHYRKVMREGT 431
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ ++R+ G +++ KD Y V S G VP + +++ K RY T
Sbjct: 432 GWIADIETKERQASGISNLKIDYNKKDGYYFHVTNSNLGMVPDHFFRKATLKNSERYGTA 491
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+ K+ G++ +A E S I R+ Q + ++ +Q+ A A + ++
Sbjct: 492 ELAKIEGQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLAKALATVDVL 542
>gi|398864674|ref|ZP_10620206.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM78]
gi|398244792|gb|EJN30331.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM78]
Length = 859
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 153/632 (24%), Positives = 261/632 (41%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A S L E+ L+ +
Sbjct: 358 -------------IGLRNARPRDLARLRDALGALPQLQVAMSEL-------EAPHLNQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 ITTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|398893156|ref|ZP_10645974.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM55]
gi|398184629|gb|EJM72071.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM55]
Length = 859
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 156/633 (24%), Positives = 266/633 (42%), Gaps = 126/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKH 859
T P + ++L+ K D N +I GGV + YDS +++ + + +
Sbjct: 397 ATITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKNGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQF 944
K K L S+A + ++ +++L+ LI Q
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|379714069|ref|YP_005302407.1| DNA mismatch repair protein MutS [Rickettsia massiliae str. AZT80]
gi|376334715|gb|AFB31947.1| DNA mismatch repair protein MutS [Rickettsia massiliae str. AZT80]
Length = 886
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 189/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETP + K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPAE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 135 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + A+G L YL +
Sbjct: 220 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 261
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 262 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHTVTKQ 318
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 319 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 376
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 377 NRSSGRD 383
>gi|71738021|ref|YP_275945.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|90109852|sp|Q48F92.1|MUTS_PSE14 RecName: Full=DNA mismatch repair protein MutS
gi|71558574|gb|AAZ37785.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 859
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/635 (23%), Positives = 255/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 219 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L E+ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|416025758|ref|ZP_11569406.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320329641|gb|EFW85630.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 859
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/635 (23%), Positives = 255/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 219 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L E+ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|119476596|ref|ZP_01616906.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2143]
gi|119449852|gb|EAW31088.1| DNA mismatch repair protein [marine gamma proteobacterium HTCC2143]
Length = 855
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 159/642 (24%), Positives = 267/642 (41%), Gaps = 141/642 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+++ K++H ++++F++MG FYELF DA + ++ + + GE P G P
Sbjct: 12 QQYFKIKAEHPNELVFYRMGDFYELFFDDAKLASELMGITLTARGKSGGEPIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL R G V + EQT P KG V+R++ VVT GT+++ L
Sbjct: 72 SADGYLAKLVRHGQSVAICEQTGDPA------TSKGP----VERQVVRVVTPGTISDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + D + L+A+ + N FG+ +D+ + R + +V D + +LS
Sbjct: 122 LEEHRD-NLLVAVNQVNSR---------FGMATLDIGSGRFQVFEVED------VSAVLS 165
Query: 506 ELRPVEIIKPANMLSPE--TERAILRHT---RNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
EL+ ++ PA +L + IL T R P P W+ E E
Sbjct: 166 ELQRLD---PAEILIHDDINNEHILARTGVRRRP------P----WEFEQDTAE------ 206
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
R+ + N D G C+ L+ ++A G L Y +++
Sbjct: 207 RLLTQQFNTKDLT---------GFGCVGLNLA------------IAAAGCLLQYAQET-- 243
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ L ++ +VLDA NLE+ N GD TL ++
Sbjct: 244 -------QRTALPHIRSLTHERREDSVVLDAATRRNLEIDTNLTGGDKH-TLQWVMDKTK 295
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLAR 739
TA G RLLR WL RPL ++ ++ ERQDA+ R + + E FR+ L + DMER+LAR
Sbjct: 296 TAMGSRLLRRWLNRPLNDAAILVERQDAI---RSLLHNYQFEPFREGLKPVGDMERILAR 352
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ S A + L +L + C++L A L T
Sbjct: 353 IALRS---------------ARPRDLSRLAQSLAALPELQSLCAALDAPLITT------- 390
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTK 858
L + D +N +I G V + YD+ +++ I ++ +
Sbjct: 391 -------LAKTAGVYTELTDLLGRAITDNPPVVIRDGSVIAEGYDAELDELRNISSNAGQ 443
Query: 859 HL-------KEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFF 908
L KEQ T I + +G + Y +E+ ++ + P +Y R + K
Sbjct: 444 FLVDLETREKEQ------TGINTLKVGYNRVHGYYIEISKAQSHNAPANYIRRQTLKNAE 497
Query: 909 RYWTPNIK----KLLGELSQAESEKESALKSILQRLIGQFCE 946
R+ TP +K K L S+A + +++ ++L+ L Q E
Sbjct: 498 RFITPELKVFEDKALSAKSRALTREKALYDALLETLNEQLAE 539
>gi|337282898|ref|YP_004622369.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
15912]
gi|335370491|gb|AEH56441.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
15912]
Length = 849
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 157/657 (23%), Positives = 274/657 (41%), Gaps = 133/657 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVTAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S FG+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------FGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDQLSEL-----EKKTAGKLLRYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L+ + S L G + D L A L
Sbjct: 332 VYDIERLASRI-----SFGKINPKDLLWLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A + ++
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVL 542
>gi|336265402|ref|XP_003347472.1| MSH3 protein [Sordaria macrospora k-hell]
gi|380087954|emb|CCC05172.1| putative MSH3 protein [Sordaria macrospora k-hell]
Length = 1157
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 160/681 (23%), Positives = 265/681 (38%), Gaps = 117/681 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ E K KHMD ++ ++G + F DA + A+EL + + G E P
Sbjct: 201 QFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAHLDRFA 260
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++V++L G++V VV Q ET +K +++ R++ V TKG
Sbjct: 261 SASIPVHRLPVHVKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRKLTNVYTKG 316
Query: 439 TLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
T + GEL + YL+ LTE+ GI V AT II +
Sbjct: 317 TYIDETGELDQPGETTGASSGGYLLCLTETPAKGMGTDEKVNVGIIAVQPATGDIIYDEF 376
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN--------DLVPLS 543
D + L + P E + + LS T++ +++H N + +P S
Sbjct: 377 EDGFMRREIETRLLHISPCEFLIVGD-LSKATDK-LIQHLSGSSTNVFGDKSRVERIPKS 434
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+ AE Y+ +T KA + S A D + LP
Sbjct: 435 KTMAAEA--------YSHVTDFYAGKAKDSDERSAALLDKVLKLP-------------EA 473
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
V+ L + +L + L + + K+ F + + +M+++ LE+LEV+ N+
Sbjct: 474 VIICLSAMIIHLTEYGL-QHIFGLTKY-------FQSFSTRQHMLINGTTLESLEVYRNA 525
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
G+L L+ T FG+RLLR W+ RPL + + ER AV L +N +
Sbjct: 526 TDHSEKGSLLWALDKTHTRFGQRLLRKWIGRPLLDQQRLEERVSAVEEL--LNNQSTAKV 583
Query: 724 RKALSRL----PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
K + L D+ER L R++ Y + +L + L L
Sbjct: 584 DKLVGMLKSIKADLERSLIRIY---------------YGKCTRPELLSTLQTLQKISL-- 626
Query: 780 QACSSLGAILENTESRQLHHILTPG-KGLPAIVSIL-------------KHFKDAFDWVE 825
++ +++ +LT LP+I I+ K K AF ++E
Sbjct: 627 ----EYARVISPSDTGFASPLLTSAIMTLPSISPIVTAHLSKINAEAARKDDKYAF-FLE 681
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLL 884
+ + I H + +E L +H E K LG + YVT+ YL+
Sbjct: 682 QHETDAISEHK----------LGIAAVEQDLDEHRSEAAKELGKKVPVNYVTVAGIEYLI 731
Query: 885 EVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
EV + VP + S K R+ TP + +L+ E Q + SA L+ Q
Sbjct: 732 EVANTDLKRVPASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFADLLAQI 791
Query: 945 CEHHNKWRQMVAATAGLTLIL 965
+ R V++ + L +L
Sbjct: 792 AGEYQPLRDAVSSLSTLDCLL 812
>gi|385263093|ref|ZP_10041187.1| DNA mismatch repair protein MutS [Streptococcus sp. SK643]
gi|385188631|gb|EIF36109.1| DNA mismatch repair protein MutS [Streptococcus sp. SK643]
Length = 844
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 151/660 (22%), Positives = 278/660 (42%), Gaps = 145/660 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKQQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L KGY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEKGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+AL E N+ FG+ +D+ T V LD
Sbjct: 116 VD----SSKPDSQNNFLVALDREGNK----------FGLAYMDLVTGDFY---VTGLLDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEAEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + + E L+ DS +A+ + +A L Y+ +
Sbjct: 197 -YEKESFEDLHLLDSRLASVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I ERQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKKRIVERQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S + + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKK 848
E + L +++ G+P + S++ A + +I GG + +D K
Sbjct: 370 EGMKQPALAYLIAQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERESSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A + ++
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|416018037|ref|ZP_11565038.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. B076]
gi|320323087|gb|EFW79176.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. glycinea
str. B076]
Length = 859
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/635 (23%), Positives = 255/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 219 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T++ LDA + NLE+ + + SG TL + ++ C TA
Sbjct: 267 TVI-----------------------LDAASRRNLEL-DTNLSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 303 MGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + QA + L E+ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALSALPELQQAMTDL-------EAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 398 QTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|406961398|gb|EKD88130.1| hypothetical protein ACD_35C00041G0001, partial [uncultured
bacterium]
Length = 409
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 182/422 (43%), Gaps = 79/422 (18%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGFP 383
++Q+ + K K+ D ++FF++G FYE F+ DA + ++ELD+ KG++ P G P
Sbjct: 9 RQQYLDIKKKYPDTIVFFRLGDFYETFDEDAEITSRELDIVLTGRGSADKGKRIPMAGIP 68
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +L KGY V + EQ + + KG + RE+ VVT GT+ E
Sbjct: 69 YHAVENYLSRLIDKGYHVAICEQVGS-------QPSKG----LFPREVVRVVTPGTVFEP 117
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
LL ++ + ++L A+T +T+ FG+ VD++T Q + L L
Sbjct: 118 SLLKSDRN-NFLAAVT---------ATEDHFGLAYVDISTGEF---QTTEIASLDTLNDL 164
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
SEL + PA +L PE+ + N N V W E+ + I R+
Sbjct: 165 RSELTR---LNPAEVLCPESLKL------NDSFNGHVTRLPDWRFESG--RCREIILRLM 213
Query: 564 -AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+LN G G+ LP + G L YLK +
Sbjct: 214 EVTTLN------------GYGMEGLP--------------LAIQTSGVILQYLKDT---- 243
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
LL G + +M LDA NLE+ E R GD G+L + L+ +T
Sbjct: 244 -----QPSSLLLLKGISVYSTSEFMTLDAATRRNLELTETIRRGDIHGSLLSILDQAITP 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RL+R W+++PL N I RQ V + L FR L L D+ERL+ R+ A
Sbjct: 299 MGHRLIRQWVSKPLLNLETIHTRQQVVQFFFNTSM-LRLGFRSLLQHLGDLERLVNRVTA 357
Query: 743 SS 744
+
Sbjct: 358 GN 359
>gi|395648790|ref|ZP_10436640.1| DNA mismatch repair protein MutS [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 859
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 152/635 (23%), Positives = 260/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNFSVQEIK---GWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 169 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 215 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + SG TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLSGGRDNTLQSVVDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 298 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDSYRFEKLQPQLKEIGDIERILAR-- 353
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L ++ L +
Sbjct: 354 -------------IGLRNARPRDLARLRDALGALPQLQVAMTEL-------DTPHLQQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 394 KTAGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDNELDELQSLSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY+ R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPIDYQRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIGQ
Sbjct: 505 LKEFEDKALSAKSRALAREKMLYEALLEDLIGQLA 539
>gi|118593679|ref|ZP_01551054.1| DNA mismatch repair protein [Stappia aggregata IAM 12614]
gi|118433689|gb|EAV40351.1| DNA mismatch repair protein [Stappia aggregata IAM 12614]
Length = 908
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 181/415 (43%), Gaps = 64/415 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERN 386
Q+ E K+ + D ++F++MG FYELF DA V + L + K + P CG P
Sbjct: 22 QFLEIKAANPDSLLFYRMGDFYELFFEDAEVASAALGITLTKRGKHQGADIPMCGVPVHA 81
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ KL KG+RV V EQTE P + K++GSK V + +VT GTLTE LL
Sbjct: 82 ADDYLNKLIAKGHRVSVCEQTEDPAE----AKKRGSKSVVRRDV-VRLVTPGTLTEERLL 136
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A + +YLMALT S +G+ +D++T + + D L L++
Sbjct: 137 DAGSN-NYLMALTRLKGGSLDGSA--VYGLAWIDMSTGSFQVSET----DHQRLAADLAQ 189
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL-SEFWDAETTVLEIKNIYNRITAE 565
+ P E+I N+L E+E LR T L P+ F+D+ T + + +
Sbjct: 190 VSPRELILSDNLLQ-ESE---LRLTAEQAGGALSPVPRAFFDSSTATDRLAHYF------ 239
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
G+ L G G LSA G L Y++K+ L E
Sbjct: 240 -----------------GVKTLDGF-------GTFSRAELSAAAGILAYVEKTQLGER-- 273
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
P A M++D NLE + SG+ G+L A ++ VT G
Sbjct: 274 -------PPLDPPVREAGAGRMLIDPATRANLE-LSRTLSGEKQGSLLATIDRTVTGGGS 325
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
RLL + LA PL N I+ R D VA N+ R+ L PDM R L+R+
Sbjct: 326 RLLASRLAGPLVNVDAIQHRLDGVAFFL-ENEIMREGLRQTLKGAPDMARALSRI 379
>gi|398948828|ref|ZP_10672962.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM33]
gi|398160145|gb|EJM48424.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM33]
Length = 859
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 155/633 (24%), Positives = 265/633 (41%), Gaps = 126/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ P + ++L+ K D N +I GGV YDS +++ + + +
Sbjct: 397 ASITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYVRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQF 944
K K L S+A + ++ +++L+ LI Q
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|73669015|ref|YP_305030.1| DNA mismatch repair protein MutS [Methanosarcina barkeri str.
Fusaro]
gi|90109848|sp|Q46CE2.1|MUTS_METBF RecName: Full=DNA mismatch repair protein MutS
gi|72396177|gb|AAZ70450.1| DNA mismatch repair protein MutS [Methanosarcina barkeri str.
Fusaro]
Length = 900
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 174/658 (26%), Positives = 276/658 (41%), Gaps = 112/658 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGFPER 385
Q++E K + D +IFF+MG FYE F DA AKEL++ GE+ P G P
Sbjct: 11 QYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDKSGERMPLAGIPYH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY+V + EQ E P +K KG +VKR + VVT GT + +
Sbjct: 71 AIDTYLPRLINKGYKVAICEQLEDP------KKAKG----IVKRGVVRVVTPGTAIDSSM 120
Query: 446 LSANPDAS--YLMALTESNQSPASQSTDRCF--GICVVDVATSRIILGQVMDDLDCSVLC 501
S DAS YLMA+ ++ + F G+ +D++T + Q D + L
Sbjct: 121 FS---DASNNYLMAVAGREIGKPGKNAENEFEIGVSFLDISTGEFLTTQFRDSENFEKLL 177
Query: 502 CLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
L+ +RP E I P+++ NP L+E A+T V E
Sbjct: 178 SELARMRPSECILPSSLYE------------NP------ALAERLRAQTIVQEFA----- 214
Query: 562 ITAESLNKADSNVANSQAEGDGL------TCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+++ ++ G+ L L G+ E + V SA
Sbjct: 215 ----------PDISGAKEAGERLKNHFRVATLEGMGCENLDFA-----VYSAWAAL---- 255
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ T +R EL + + +M+LD+ L NLE+ +N R +LY
Sbjct: 256 --EYAQTTQMR----ELTHINTLRTYSNSEFMILDSVTLRNLEIVKNVRDEGDENSLYRI 309
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDME 734
LNH T G R L+ WL +PL + I R DAV L +P + R LS + D+E
Sbjct: 310 LNHTKTPMGSRALKKWLLKPLLSVEKINYRLDAVEELTA--KPLLRYDLRNWLSDVRDIE 367
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL+ R+ NSN ++ ++ E + SL LEN ES
Sbjct: 368 RLVGRVVYG------NSNA------------RDLVALKKSLEALPPVRDSL---LENIES 406
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIE 853
L+ I GL A S L++ + D + + GG + Y++ ++K+I
Sbjct: 407 TILNDIAV---GL-ASFSELENLAEMIDRAIVDEPPISVREGGMIKSGYNAELDELKDIA 462
Query: 854 ASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
++ + + Q+K + I + +G + Y +EV + VP DY + + R
Sbjct: 463 SNSRQWIANFQQKERERSGIKSLKVGYNKIFGYYIEVTNANSSQVPEDYIRKQTMANAER 522
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLD 967
++TP +K+ + A +EK AL+ + I Q H++ Q A G +L D
Sbjct: 523 FFTPELKEKESLILTA-NEKAIALEYEIFTEILQTLSAHSRELQETAERIGTLDVLTD 579
>gi|406909772|gb|EKD49954.1| hypothetical protein ACD_63C00001G0002 [uncultured bacterium]
Length = 830
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 167/658 (25%), Positives = 276/658 (41%), Gaps = 108/658 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-----KG-EQPHCGFPE 384
+Q+ K++H D ++FF+MG FYE+F DA V +K LD+ KG + P CG P
Sbjct: 1 MRQYSVIKAQHKDSILFFRMGDFYEMFFEDAKVASKILDIALTSRNKEKGIDVPLCGVPY 60
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + G +V V EQ E P K KG +VKR++ VVT GT
Sbjct: 61 HAAENYLAKLVKAGKKVAVCEQIEDPA------KAKG----IVKRDVVRVVTPGTALSDS 110
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
LL + ++++++ + + Q GI V DV+T + D S L L
Sbjct: 111 LLDERVN-NFIVSVIVAEDRNSEQYK---VGIAVSDVSTGEFRGTEFFDAKKLSSLKNEL 166
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
++L P E + P ++ IL + ++ P + W+ E TA
Sbjct: 167 TKLNPRECLIPKDLYK---NFGILEALKCVDGMNIYPYED-WNFEKE-----------TA 211
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+ ++ +V + + GI E ++ G +G+ + S+L ET
Sbjct: 212 KDFLRSHFDVESLEG--------FGIKDEELAIGSAGALL-------------SYLRET- 249
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K +L S F + M+LD L NLE+ RSG+ TL L+ +T+ G
Sbjct: 250 ---QKTKLNHISKFNLYSIDERMILDDATLRNLELVSTLRSGEKKNTLLWVLDDTLTSMG 306
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR + PL N I+ R D+V N E + L + D+ERL ++ S
Sbjct: 307 GRLLRNSVLSPLINVEKIKNRLDSVEEFCKDN-ILREEVGEKLKEVSDLERLAGKIGCMS 365
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
AN R+ ++ +D+ K +L +IL+N +S++L +
Sbjct: 366 -ANARD---LLALKDSLK------------------IIPALKSILKNVDSKRLIFLKNNL 403
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-Q 863
+ +V +++ D V + G +I G YD+ K+K+ S + +K Q
Sbjct: 404 NEIKEVVDLIEKSVDESSPVTLKD-GNLIKKG-----YDAKLDKIKDAAISGKEWIKTLQ 457
Query: 864 RKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLG 920
RK I + + + Y +EV ++ VP DY + + R+ TP +K
Sbjct: 458 RKESARAKIPSLKVKFNRVFGYYIEVSKTNLSQVPSDYIRKQTLVNAERFITPELK---- 513
Query: 921 ELSQAESEKESALKSILQRLIGQ----FCEHHNKWRQMVAATAGLTLILLDGSLLHAF 974
EKE + + +R+I F E +K + + + IL + LL F
Sbjct: 514 -------EKEDLILNAEERMIELEFRIFVEIRDKVSEYIKDIQKVAKILAELDLLSNF 564
>gi|342866487|gb|EGU72148.1| hypothetical protein FOXB_17392 [Fusarium oxysporum Fo5176]
Length = 1108
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 160/672 (23%), Positives = 272/672 (40%), Gaps = 87/672 (12%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 205 LTPMEIQFLDIKRKHMDTILIMEVGYKFRFFGEDARIAAKELSIVCIPGKMRYDEHPSEA 264
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++ ++L G++V VV Q ET +K +++ R++
Sbjct: 265 HLDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNTPFVRKLT 320
Query: 433 AVVTKGTLTE--GEL----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
+ TKGT + GEL S P YL+ LTES GI V AT I
Sbjct: 321 NLYTKGTYIDENGELDQSGGSGAPSGGYLLCLTESKAKGWGTDEKVDVGIIAVQPATGDI 380
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSE 544
I D S + L + P E + + L+ T++ + L T + D +
Sbjct: 381 IYDNFEDGFMRSEIETRLLHISPCEFLIVGD-LTKGTDKLVQHLSGTSTNVFGDRSRIER 439
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
++T E Y+ +T +K N + A +L +++ +S +
Sbjct: 440 VPKSKTMAAEA---YSHVTQFYADKLKDNAKDETA--------AALLDKVLKLPESVTIC 488
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
LSA+ + +L++ L E + K+ F + + +M+++ LE+LEV+ NS
Sbjct: 489 LSAM---INHLQEYGL-EHIFDLTKY-------FQSFSTRSHMLINGTTLESLEVYRNST 537
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFR 724
G+L+ LN +T G RLLR W+ RPL + L+ R +AV L +
Sbjct: 538 DHSEKGSLFWALNKTLTRPGHRLLRKWVGRPLLDQQLLEARLNAVEELLEKQSTVPVSQL 597
Query: 725 KAL--SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL-------HGC 775
++L + D+ER L R++ G+ + + A +++ + S +
Sbjct: 598 ESLLANTKTDLERSLIRIY-----YGKCTRPELFSVLQALQRVASYYSTVKSPSDAPFSS 652
Query: 776 ELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH--FKDAFDWVEANNSGRII 833
L++ A +L IL+ S L I L A K+ F+D F + + I
Sbjct: 653 SLLNDAVCALPQILDTVVS-YLERI-----NLVAAQKDDKYGFFRDEFQTEDMQDHQLGI 706
Query: 834 PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGS 893
H +E L H + + ++ YVT+ YL+EVP + +
Sbjct: 707 AH----------------VEHELDGHRAVAAEKIKKKTVDYVTVAGIEYLIEVPNTDIKN 750
Query: 894 VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQ 953
VP + S K R+ TP + +L+ E Q +A L+ + R
Sbjct: 751 VPASWAKISGTKKLSRFHTPEVLRLITERDQHREALAAACDKAFTDLLASISADYQPLRD 810
Query: 954 MVAATAGLTLIL 965
V+A A L IL
Sbjct: 811 AVSALATLDCIL 822
>gi|282850161|ref|ZP_06259540.1| DNA mismatch repair protein MutS [Veillonella parvula ATCC 17745]
gi|282579654|gb|EFB85058.1| DNA mismatch repair protein MutS [Veillonella parvula ATCC 17745]
Length = 877
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 188/419 (44%), Gaps = 81/419 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNEDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ VVT GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVVTPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N S + ++ + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLSLFYMVKDT------------WILVFSDVSTGEVIWHRITDCEKRSDMYDA 167
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ R + + + +V P S ++ R
Sbjct: 168 LSMYRPTEIILPEGTILPQDIRDFIENQFSNVV--FSPFSTYYT------------QREV 213
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
AE KA ++ + G++ E V ALG L YL+
Sbjct: 214 AE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED------ 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ---IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AV+ L RG + R L + D ER++ R+
Sbjct: 302 GARLLKQWLESPLTDINQIQRRQAAVSELITRGAERS---HIRNFLDCIYDFERIVGRV 357
>gi|51892895|ref|YP_075586.1| DNA mismatch repair protein MutS [Symbiobacterium thermophilum IAM
14863]
gi|81692094|sp|Q67NK1.1|MUTS_SYMTH RecName: Full=DNA mismatch repair protein MutS
gi|51856584|dbj|BAD40742.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 875
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 179/427 (41%), Gaps = 74/427 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-------KGEQPHCGFPER 385
Q+ + K ++ D ++F+++G FYE F DA + A+EL+L G P G P
Sbjct: 12 QYLQIKEQYPDCILFYRLGDFYETFMDDAELVARELELVLTGRDAGKDMGRVPMAGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY+V + +Q E P +K KG +VKR++ VVT GTL E L
Sbjct: 72 AAEAYIARLIEKGYKVAICDQLEDP------KKAKG----LVKRDVTRVVTPGTLVEPRL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + ++L A+ S FG+ VVD++T Q+ +L +
Sbjct: 122 LPEKAN-NFLAAIAWSRTG---------FGLAVVDLSTGEFAAAQMNGADSLRLLLEEIG 171
Query: 506 ELRPVEII-KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
L P E+I +P P PL + +S F E N Y ++T
Sbjct: 172 RLEPREVILEPGLAAEPSVT--------GPLKASGIAVSVF---EGRHFNHANAYRKLT- 219
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E G L G E + L + ++L+E
Sbjct: 220 ---------------EHFGTANLSGFGCEDLE-----------LATSAAGAALAYLEE-- 251
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L SG YMVLD NLE+ + R G GTL ++ VTA G
Sbjct: 252 --MHKASLGHVSGLAVYYPGDYMVLDPATRRNLELTRSLRDGGRRGTLLWVMDRTVTAMG 309
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFAS 743
RLL++WL RPL + I R +AV L V++P + R L + D+ERL R+ A
Sbjct: 310 ARLLKSWLERPLLDLRQIHARHEAVGEL--VHRPVLRADLRALLQEVHDLERLAGRV-AV 366
Query: 744 SEANGRN 750
AN R+
Sbjct: 367 GSANARD 373
>gi|399003101|ref|ZP_10705772.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM18]
gi|398123505|gb|EJM13054.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM18]
Length = 895
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 155/633 (24%), Positives = 258/633 (40%), Gaps = 126/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 52 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 111
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 112 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 161
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 162 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 208
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 209 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 254
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 255 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TALPH-LRSLRHERLDD 302
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLD + NLE + + +G TL + ++ C TA
Sbjct: 303 T-----------------------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQTA 338
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR
Sbjct: 339 MGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFEKLQPQLKEIGDIERILAR--- 393
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ +A + L AL + A + L E+ + + T
Sbjct: 394 ------------IGLRNARPRDLARLRDALGALPELQMAMAEL-------EAPHIIQLAT 434
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 435 TTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFLI 487
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y I Y +E+P S P DY R + KG R+ TP +
Sbjct: 488 DLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPEL 545
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQF 944
K K L S+A + ++ +++L+ LI Q
Sbjct: 546 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL 578
>gi|315924593|ref|ZP_07920812.1| DNA mismatch repair protein MutS [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622123|gb|EFV02085.1| DNA mismatch repair protein MutS [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 882
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 184/432 (42%), Gaps = 89/432 (20%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------P 378
L+ +Q+ + K D ++ F++G FYE F DA +K L++ + G++ P
Sbjct: 2 GLTPMMQQYLKMHEKVPDTIMLFRVGDFYETFFDDAITASKALEIA-LTGKRCGLDEPAP 60
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
CG P + KL KGY+V V EQ E P + +VKR+I VV+ G
Sbjct: 61 MCGVPHHAAEPYIAKLVEKGYKVAVCEQMEDP----------AAAKGIVKRDIIKVVSPG 110
Query: 439 TLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
T+TEG L+ A + +YL ++ S R FG+ +DV+T ++ D
Sbjct: 111 TITEGGLIQAKKN-NYLASIF---------SDRRVFGLAYLDVSTGAFYATELPFTADSG 160
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL-------VPLSEFWDAETT 551
L L ++ P EII ++P + + ++ L+ +L V LS E
Sbjct: 161 ELVNELGKIEPSEII-----VNP------MLYKQSALIQNLETRFGCMVGLSAAAHYEKA 209
Query: 552 VLE--IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
E I++ + +SL D A A G L L +S +VL +
Sbjct: 210 ACERVIEDQFKVFALDSLGLKDHEAATRAA---------GAL--LAYVAESQKKVLGHIN 258
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
+Y ++ YM+LD NLE+ E R GD
Sbjct: 259 HLAYYRIEA---------------------------YMLLDLSTRRNLELTETLRHGDKR 291
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALS 728
G+L L+ TA G RLLR W+ PL N I RQ+ VA L P AL E + L+
Sbjct: 292 GSLLWVLDQTATAMGGRLLRQWVEAPLINREKIEIRQNLVAELAA--NPGALPELKTLLT 349
Query: 729 RLPDMERLLARL 740
++ D+ER+ ++
Sbjct: 350 KIYDLERICGKI 361
>gi|115395500|ref|XP_001213513.1| hypothetical protein ATEG_04335 [Aspergillus terreus NIH2624]
gi|121739057|sp|Q0CPP9.1|MSH3_ASPTN RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|114193082|gb|EAU34782.1| hypothetical protein ATEG_04335 [Aspergillus terreus NIH2624]
Length = 1117
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 149/670 (22%), Positives = 280/670 (41%), Gaps = 77/670 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ ++Q + K KHMDK++ ++G + F DA V AKEL + + G E P
Sbjct: 206 LTPMERQIIDMKRKHMDKILAVQVGYKFRFFGEDARVAAKELSIVCIPGKFRFDEHPSEA 265
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L G++V +V Q ET + +++ R++
Sbjct: 266 HLDRFASASIPVHKLHVHVKRLITAGHKVGIVRQIETAAL----KAAGDNRNAPFVRKLT 321
Query: 433 AVVTKGTLT---EG-----ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
V TKGT EG Y++ +TE+N GI V AT
Sbjct: 322 NVYTKGTYIDDMEGLEGPTAGAGTTAATGYMLCITETNAKGWGNDEKVHVGIVAVQPATG 381
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
I+ D S + L L P E++ + LS +++ + L ++ + D V +
Sbjct: 382 DIVFDDFEDGFMRSEIETRLLHLAPCELLIVGD-LSKASDKLVQHLAGSKMNVFGDKVRV 440
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
++T E + + A+ + A+++ ++QA +L ++++ + S
Sbjct: 441 ERTTKSKTAAAEAHSHVSSFYADKVKSANAS-DDTQASN--------LLQKVLNLPEQVS 491
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LS++ + ++ + L E + K+ F + + +M+L+ L +LE+++N
Sbjct: 492 ICLSSM---IKHMTEYGL-EHVFDLTKY-------FQHFSSRSHMLLNGNTLMSLEIYQN 540
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G+L+ L+ T FG+RLLR W+ RPL + + ER +A+ L+ + + +E
Sbjct: 541 QTDHSSRGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSKLEERVNAIEELKSMEKVAMVE 600
Query: 723 -FRKALSRLP-DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ L + D+E++L R++ Y + +L L G + +
Sbjct: 601 RLKGVLGKAKCDLEKILIRIY---------------YGRCTRPEL------LTGLQTLQM 639
Query: 781 ACSSLGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
G + +S IL LP I+ + F + + A N + +
Sbjct: 640 IAQEFGDVKSPEDSGFTTPILNEAIASLPTILEDVLSFLNKINLHAARNDDKYEFFREAE 699
Query: 840 MDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP--ESLRGSVP 895
D + K + +E L ++ K+LG + I YVT+ YL+EV S VP
Sbjct: 700 ETEDISEHKLGIASVEHELREYQSVAGKILGRSKIQYVTVAGIDYLIEVENNSSYLKRVP 759
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ S K R+ +P + KLL + Q + +A L+ + ++ +R V
Sbjct: 760 ASWVKISGTKKLSRFHSPEVIKLLRQRDQHKEALAAACDHAYASLLAEIAANYQPFRDCV 819
Query: 956 AATAGLTLIL 965
+ A + +L
Sbjct: 820 QSLATIDCLL 829
>gi|423690232|ref|ZP_17664752.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens SS101]
gi|387998596|gb|EIK59925.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens SS101]
Length = 863
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 155/635 (24%), Positives = 265/635 (41%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQPIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLQARQSSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ +SAL L + ++ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALSAL----------PQLQVAMTELDTPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YDS +++ + + + L
Sbjct: 398 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LI +
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLEDLISRLA 543
>gi|307943418|ref|ZP_07658762.1| DNA mismatch repair protein MutS [Roseibium sp. TrichSKD4]
gi|307773048|gb|EFO32265.1| DNA mismatch repair protein MutS [Roseibium sp. TrichSKD4]
Length = 906
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 182/414 (43%), Gaps = 62/414 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERN 386
Q+ E K+ + D ++F++MG FYELF DA V A+ L + K + P CG P
Sbjct: 22 QYIEIKTANPDSLLFYRMGDFYELFFHDAEVAAQALGITLTKRGKHQGADIPMCGVPVHA 81
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
++KL G+RV V EQTE P + K++GSK V + +VT GTLTE LL
Sbjct: 82 ADDYLQKLISLGHRVSVCEQTEDPAE----AKKRGSKSVVRRDV-VRLVTPGTLTEDRLL 136
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A + ++L AL S SQ D +G+ +D++T + + D L L++
Sbjct: 137 DAGAN-NFLAAL--SRLKAGSQEGDAIYGLAWIDMSTGSFQVSET----DHQRLSADLAQ 189
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
+ P E+I N+L R ++ T + L VP + F+D T + + +
Sbjct: 190 IAPRELILADNLLQETELRQLVELTGSALSP--VPRA-FFDGSTAADRLAHYF------- 239
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
G+ L G G L+A G L Y++K+ L E
Sbjct: 240 ----------------GVKTLDGF-------GTFSRAELTAASGILAYIEKTQLGER--- 273
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
P A M++D NLE+ + SG+ G+L ++ VT G R
Sbjct: 274 ------PPLDPPTREAGSGRMLIDPATRANLEL-SRTLSGEKQGSLLTTIDRTVTGGGAR 326
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
LL + LA PL +I +R D+V N+ R+ L PDM R L+R+
Sbjct: 327 LLASRLAGPLIRPDIINQRHDSVDFFLN-NEIMREHLRQTLKGAPDMARALSRI 379
>gi|443898358|dbj|GAC75693.1| mismatch repair MSH3 [Pseudozyma antarctica T-34]
Length = 1112
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 157/660 (23%), Positives = 268/660 (40%), Gaps = 76/660 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ E K+ H ++ ++G + + DA + +KEL++ C FPERN
Sbjct: 212 EKQILELKAAHPGVLLIIEVGYKLKFYGEDARIASKELNIM--------C-FPERNLLTA 262
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT- 439
++V++L + G++V VV Q ET L+ K + V R++ A+ T T
Sbjct: 263 MIPVHRLHIHVKRLIQAGHKVGVVRQIETRA---LKAASKNAYTPFV-RKLTALYTASTW 318
Query: 440 -----------LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
L G + P + LMAL E ++ G+ V+V T +
Sbjct: 319 IDDLSSSDDVNLATGAAHTYQPKS--LMALVEQSEGGNGPEDRVAIGLISVEVNTGYLTY 376
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
Q D + L ++ L P E++ P + P TE+ I L+ +
Sbjct: 377 DQFSDSHARTELETRIAHLAPAELLVPQELTRP-TEKVI-----GYLLGSGAEGGVRIER 430
Query: 549 ETTVLEIKNIYNRITAESLNK--ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+ L+ + +T ++ DS N + + D P L LI + L
Sbjct: 431 VASKLDYNQAFQSVTQFYRDQVSGDSTSTNVEMDVDAQDKRPAELMSLIQS--LPHLALI 488
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
AL + +L+ +F E++ + + F + + M+L++ L NLE+F G
Sbjct: 489 ALAQIIHHLQ-AFNLESICTLS-------TNFQSFSSRTTMLLNSNTLANLEIFRTV-DG 539
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
G+L L+ C T+ G+RLLR W++RPL + + +R DA+ +
Sbjct: 540 QEKGSLIWLLDKCRTSMGRRLLRKWVSRPLTDVDALEKRLDAIEAIISAKSYVVRMLPNF 599
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L LPD+ER LAR+ A V+L + + QE A +D G
Sbjct: 600 LQGLPDLERGLARM-TYGRATPTELATVLL---SLNRVTQEVRPAERDTWKLDS-----G 650
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSAC 846
+ E H+L G A+ + L + ANN + +A
Sbjct: 651 LVEE--------HLLNLAAGKTAVQTYLNQI--SIKEARANNKADLFADAERYPAIQTAK 700
Query: 847 KKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG 906
+ +E L +HL+E RK L S+ Y ++ YL+EV + VP D+ S+ K
Sbjct: 701 DNIAIVETELREHLRELRKTLHRPSLEYASVSGVDYLVEVRVADAKKVPADWLRVSATKA 760
Query: 907 FFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFC-EHHNKWRQMVAATAGLTLIL 965
R+ TP + +L Q + +A +S + C + R +V + A L +++
Sbjct: 761 MVRFHTPEVIRLTRLRDQHKETLAAAAESAFGDFVRAMCTTEYVVLRNVVTSLAVLDVLV 820
>gi|326484465|gb|EGE08475.1| DNA mismatch repair protein Msh3 [Trichophyton equinum CBS 127.97]
Length = 1148
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 160/677 (23%), Positives = 273/677 (40%), Gaps = 102/677 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE--------QP 378
L+ ++Q E K+KH+D V+ ++G Y+ + DA AK L + + G+ +
Sbjct: 239 LTPMERQIMEIKNKHLDAVLLIQVGYKYQFYGEDARTAAKVLSIVCIPGKLRFDDHPSEA 298
Query: 379 H------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
H P ++V++L GY+V VV+Q ET + +++ R++
Sbjct: 299 HLTRFASASVPIHRLHVHVKRLVAAGYKVGVVKQLETAA----LKAAGDNRNAPFVRKLT 354
Query: 433 AVVTKGTLTE--GEL-LSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+ TK T E EL LS +AS YL+ LTES GI V AT +I
Sbjct: 355 NMYTKATYIEDDAELELSGALEASTGYLLCLTESGAKGQGDGEKVQIGIVAVQPATGNVI 414
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEF 545
D S + L + P E++ + LS T + + L R D V +
Sbjct: 415 HDSFEDGFMRSEIETRLLHISPCELLLVGD-LSAATNKLVQHLSKGRMTTFGDNVRIERK 473
Query: 546 WDAETTVLE----IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
++T E I + Y A + + D+ +N +L +++ D
Sbjct: 474 EKSKTAAAEAHSHISSFYAGKLAATGSPEDAKASN-------------LLDQVLKLPDDV 520
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
+ LSA+ + +L + L E + K+ F + + +M+L+ L NLE+++
Sbjct: 521 TVCLSAM---IKHLTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTNLEIYQ 569
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ-PFA 720
N S G+L+ +N T FG+RLLR W+ RPL + ER +AV L ++
Sbjct: 570 NQTDYSSKGSLFWSMNRTRTKFGQRLLRRWVGRPLLEKAKLEERTEAVTELLDSDKSTLT 629
Query: 721 LEFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
LS++ D+E+ L R V Y ++ +L + + M
Sbjct: 630 YNLGSTLSQVRVDLEKALIR---------------VYYGKCSRPELLTMLKS------MQ 668
Query: 780 QACSSLGAILENTESRQLHHILTPGKG-LPA----IVSILKHFKDA-------FDWVEAN 827
S + +S IL+ LP +VS L D +D+ +
Sbjct: 669 SIAVSFAHVKSPADSGFKSPILSESIAILPTMHDDVVSYLNKINDTAAKKDDKYDFFRES 728
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP 887
I + + IE L HLK + LG + YV++ YL+EV
Sbjct: 729 EESEEIGEHRL---------MIGTIEYELKDHLKSIAETLGKKKVQYVSVAGIDYLVEV- 778
Query: 888 ESLRGS---VPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQF 944
E+ +G+ VP + S K R+ TP + K++ E Q + +A + +L+
Sbjct: 779 ENSQGALKKVPASWRKISGTKKVSRFHTPEVVKMMRERDQQKESLAAACDAAFLKLLSDI 838
Query: 945 CEHHNKWRQMVAATAGL 961
+ +R + A A +
Sbjct: 839 STKYQLFRDCIQALATI 855
>gi|398930947|ref|ZP_10664878.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM48]
gi|398164470|gb|EJM52606.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM48]
Length = 859
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 155/633 (24%), Positives = 265/633 (41%), Gaps = 126/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKSWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ P + ++L+ K D N +I GGV YDS +++ + + +
Sbjct: 397 ASITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQF 944
K K L S+A + ++ +++L+ LI Q
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|426408034|ref|YP_007028133.1| DNA mismatch repair protein MutS [Pseudomonas sp. UW4]
gi|426266251|gb|AFY18328.1| DNA mismatch repair protein MutS [Pseudomonas sp. UW4]
Length = 859
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 155/633 (24%), Positives = 265/633 (41%), Gaps = 126/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQSSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ P + ++L+ K D N +I GGV YDS +++ + + +
Sbjct: 397 ASITSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQF 944
K K L S+A + ++ +++L+ LI Q
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|404402499|ref|ZP_10994083.1| DNA mismatch repair protein MutS [Pseudomonas fuscovaginae UPB0736]
Length = 859
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 158/634 (24%), Positives = 260/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGTRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G CL G E T L L+ LD+
Sbjct: 219 AVQDLKGFGCETLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLDA + NLE+ + + +G TL + ++ C TA
Sbjct: 267 T-----------------------VVLDAASRRNLEL-DTNLAGGRDNTLQSVVDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + ++ RQ ++ L + + E + L + D+ER+LAR+
Sbjct: 303 MGSRLLTRWLNRPLRDLKILTARQTSIGCLL---EGYRFERLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL +L D A+LE ++ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGALP--QLQD-------AMLE-LDAPHLKQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 398 TTTSTYPELAILLER-------AIIDNPPAVIRDGGVLKTGYDAELDELLSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LIG+
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEMLIGEL 542
>gi|73666889|ref|YP_302905.1| DNA mismatch repair protein MutS [Ehrlichia canis str. Jake]
gi|108884793|sp|Q3YSJ8.1|MUTS_EHRCJ RecName: Full=DNA mismatch repair protein MutS
gi|72394030|gb|AAZ68307.1| DNA mismatch repair protein MutS [Ehrlichia canis str. Jake]
Length = 804
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 195/420 (46%), Gaps = 70/420 (16%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFP 383
R ++ +Q+ K+++ + ++F+++G FYELF DA +K L++ K G P CG P
Sbjct: 5 RKITPIMQQYMMLKNQYKECLLFYRLGDFYELFFDDAIETSKVLNIVLTKKGNVPMCGVP 64
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ + +L + GY+V + EQ ETPE+ K++G K +VKR++ +VT GT+ E
Sbjct: 65 FHSSESYLNRLVKLGYKVAICEQLETPEE----AKKRGYK-ALVKRDVVRIVTPGTILED 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
LL A + +YL + N + A + G+ + R I D D
Sbjct: 120 SLLEAKEN-NYLCCIVNVNDNYAIAWLELSTGLFHYNTTDLRKI------DSD------- 165
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L + P E++ ++ + + L+ + + S F+D + + ++Y
Sbjct: 166 LLRINPKEVLISDKLVELDLIYSTLKKYKFSITQ---YSSSFFDTSRSYNTLCSVY---- 218
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK---KSFL 620
G++ L G+ GD + ++ G L Y+K K L
Sbjct: 219 -------------------GISTLKGL-------GDLKDEEIAVCGSLLEYVKATQKGNL 252
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ L F K +GD + +M +DA AL NLE+F N++SGD G+L + +++ +
Sbjct: 253 PK--LEFPK-------AYGD---RDFMFIDAAALRNLELF-NTQSGDLEGSLISSIDYTI 299
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G RLL+ L+ PL S I R D V N+ R+ L + D+ER+L R+
Sbjct: 300 TACGGRLLKRCLSAPLACSYAINRRLDIVEFFVN-NKVLYKNVRETLRGIADIERILTRV 358
>gi|398859882|ref|ZP_10615547.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM79]
gi|398235818|gb|EJN21625.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM79]
Length = 887
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 154/631 (24%), Positives = 263/631 (41%), Gaps = 122/631 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 44 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 103
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 104 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 153
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 154 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 200
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 201 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 246
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 247 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TALPH-LRSLRHERLDD 294
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLD + NLE + + +G TL + ++ C TA
Sbjct: 295 T-----------------------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQTA 330
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 331 MGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDGYRFEKLQPQLKEIGDIERILARI-- 386
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
RN+ D A+ L++ + AL L + E+ + + T
Sbjct: 387 ----GLRNARP----RDLAR--LRDALGAL----------PELQVAMAELEAPHIIQLAT 426
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHLK 861
P + ++L D +N +I GGV YDS +++ + + + L
Sbjct: 427 TTSTYPELAALL-------DKAIIDNPPAVIRDGGVLKTGYDSELDELQSLSENAGQFLI 479
Query: 862 E-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK- 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 480 DLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELKA 539
Query: 917 ---KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 540 FEDKALSAKSRALAREKMLYEALLEDLIAQL 570
>gi|398874984|ref|ZP_10630181.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM74]
gi|398193647|gb|EJM80745.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM74]
Length = 859
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 153/633 (24%), Positives = 264/633 (41%), Gaps = 126/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + + G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGSAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ + AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
T P + ++L + +N +I GGV YDS +++ + + +
Sbjct: 397 ATIASTYPELAALL-------ETAIIDNPPAVIRDGGVLKTGYDSELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQF 944
K K L S+A + ++ +++L+ LI Q
Sbjct: 510 KAFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|387892355|ref|YP_006322652.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens A506]
gi|387162725|gb|AFJ57924.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens A506]
Length = 863
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 155/635 (24%), Positives = 265/635 (41%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLQARQSSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ +SAL L + ++ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALSAL----------PQLQVAMTELDTPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YDS +++ + + + L
Sbjct: 398 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LI +
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLEDLISRLA 543
>gi|335030594|ref|ZP_08524082.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
gi|334265885|gb|EGL84376.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
Length = 843
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 150/657 (22%), Positives = 269/657 (40%), Gaps = 148/657 (22%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLVERGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A +G+ +D+ T + ++ D S++
Sbjct: 116 VD----SSKPD-------SQNNFLVAIDCEGSRYGLAYMDLVTGDFYVTELS---DFSLV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + L+ E++ ++ PE E IL N +++ Y
Sbjct: 162 CGEIRNLKAREVVIGYDL--PEVEEQILSRQMNLVLS---------------------YE 198
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ T E L+ DS +A S ++ S L L Y+ ++ +
Sbjct: 199 QGTYEDLHLLDSQLA--------------------SVEEAASSKL------LQYVHRTQM 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 233 RELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLLAE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDMER 735
TA G RLLR+W+ RPL + I ERQ+ V V + E ++L + D+ER
Sbjct: 282 TKTAMGMRLLRSWIQRPLIDKERILERQEVVQ----VFLDYFFERSDLTESLKGVYDIER 337
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG------AIL 789
L +R+ + G+++ K +L Q ++LG AIL
Sbjct: 338 LASRV-----SFGKSNPKDLL-----------------------QLATTLGSVPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKK 848
E E L +++ +P ++ A + +I GG + +D K
Sbjct: 370 EGMEQPALAYLIEQLDAIP-------ELENLISAAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G ++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGIHTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
K R+ T + ++ GE+ +A + + I R+ +G++ + Q +A
Sbjct: 483 KNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATV 539
>gi|150390307|ref|YP_001320356.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
gi|172052479|sp|A6TR79.1|MUTS_ALKMQ RecName: Full=DNA mismatch repair protein MutS
gi|149950169|gb|ABR48697.1| DNA mismatch repair protein MutS [Alkaliphilus metalliredigens
QYMF]
Length = 880
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 186/425 (43%), Gaps = 70/425 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ NL+ +Q+++ K ++ D ++FF+MG FYELF DA ++EL++ ++
Sbjct: 1 MANLTPMMQQYFDIKKQYPDSLLFFRMGDFYELFFQDAETASRELEITLTGRSCGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + +++L GY+V + EQ E Q KG +VKR++ V+T
Sbjct: 61 PMCGVPHHAATGYIDRLVSNGYKVAICEQIEDVSQ------AKG----IVKRDVVRVITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTL + +LL + +YLM++ S FG+ VD++T + ++ +++
Sbjct: 111 GTLIDTQLLDDKKN-NYLMSVFGSRTG---------FGLAYVDISTGDLFATEIKENIHP 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL--EI 555
+L + + P E++ + + E + + E W E T +I
Sbjct: 161 QMLIDEMGRVLPQELLY---FIETDKEDPTIISMIKKRFDFYTNGYEEWSYEDTFALNQI 217
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
K+ +N ++ E L S++ ++A G YL
Sbjct: 218 KDHFNVVSLEGLGFHPSHLG-----------------------------INAAGALFHYL 248
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K + K L + + M LD +NLE+ E RS G+L
Sbjct: 249 KTT---------QKRALEHINHINVYSIHEKMTLDINTRKNLELTETIRSKSKKGSLLGV 299
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+ TA G R+LR W+ PL + +I +R +AV L+ E +++L ++ D+ER
Sbjct: 300 LDKTSTAMGGRMLRKWIEAPLIDPVIINKRLEAVQLLKE-QIELRQELKESLKKIYDLER 358
Query: 736 LLARL 740
L ++
Sbjct: 359 LAGKI 363
>gi|254167808|ref|ZP_04874658.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289597150|ref|YP_003483846.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623336|gb|EDY35901.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|289534937|gb|ADD09284.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 828
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 153/600 (25%), Positives = 256/600 (42%), Gaps = 133/600 (22%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ----PHCGFPERN 386
+Q+ K+K+ D ++FF++G FYE FE DA + +KEL++ + + P G P
Sbjct: 6 MRQYHRIKAKYKDTILFFRVGDFYETFEDDAKLVSKELNIVLTRRSKDEPVPMAGIPYHA 65
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L +KGY+V + EQ E P K +G +V+R++ VVT GTL E LL
Sbjct: 66 LDAYLSRLVKKGYKVAICEQLEDPA------KARG----LVRRDVVRVVTPGTLIEDTLL 115
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ D ++L ++ + + +G +D++T G+ LD L +
Sbjct: 116 T--EDNNFLFSIYKHKE---------IYGFAALDISTGEFFAGE----LDFYGLNAEILR 160
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL--EIKNIYNRITA 564
L+P EI+ N +N D + +L E N Y +I
Sbjct: 161 LQPSEILS------------------NSKLN--------LDFQIKILAEEYYNDYEKILK 194
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E A + G G+ G+ G L A L Y K++ ++
Sbjct: 195 EHFKVA-------ELSGFGI-------------GEYG---LRAAASALKYAKENTMN--- 228
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+L + K Y++LD+ L+NLE+F N G+ TLY +N C T G
Sbjct: 229 ------DLKNITSLQGYFKDKYLILDSTTLKNLEIFHNV-LGEDKYTLYHTMNKCETPMG 281
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLL+ W+ RPL + I +R DAV L Q R LSR+ D+ER+ R+
Sbjct: 282 ARLLKRWMQRPLKDIDEINDRLDAVEELAN-KQLLQDSIRTILSRIKDIERIKTRV---- 336
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+ GR AA + L +L + + S IL+N+ S+
Sbjct: 337 -SLGR----------AAPRDLISLKESLKQADKLRINFES--KILKNSASKIY------- 376
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS---LTKHLK 861
G+ I+ ++++ A N + G + Y+ ++K I ++ L ++
Sbjct: 377 -GIEGIIELIEN---------AINGDYPVGEGVIKEGYNEELDEIKRIASNAKLLIGKME 426
Query: 862 EQRKLLGDTSITYVTIG-KDL--YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
E+ + +T I + IG D+ Y +EV +S VP+ Y + + K R+ T +K+L
Sbjct: 427 ERER--RNTGIKNLKIGYNDVMGYYIEVSKSNLSKVPKHYRRKQTLKNSERFVTDELKEL 484
>gi|37930232|gb|AAP76283.1| MutS [Pseudomonas sp. PCL1171]
Length = 864
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 150/635 (23%), Positives = 259/635 (40%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNFSVQEIK---GWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SLQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + G+++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 302 AMGSRLLTRWLNRPLRDLGVLQARQSSITCL--LDGYRFEKLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L ++ L +
Sbjct: 358 -------------IGLRNARPRDLARLRDALGALPQLQMAMTEL-------DTPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 398 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDTELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 508
Query: 915 IKKL----LGELSQAESEKESALKSILQRLIGQFC 945
+K+ L S + ++ +S+L+ LI +
Sbjct: 509 LKEFEDKPLSAKSPCPAREKMLYESLLEDLISRLA 543
>gi|421451444|ref|ZP_15900805.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|421453480|ref|ZP_15902836.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|400181789|gb|EJO16056.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
gi|400181875|gb|EJO16137.1| DNA mismatch repair protein mutS [Streptococcus salivarius K12]
Length = 852
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 157/655 (23%), Positives = 271/655 (41%), Gaps = 135/655 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKENYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQSYIDVLVEMGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD + +L+A+ ++ FG+ +DV+T + +DD S
Sbjct: 116 VD----SSKPDNANNFLVAIDKAGSR---------FGLAYMDVSTGEFFATE-LDD--SS 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+C + L+ E++ + LS E+ +++ L+ ET V + ++
Sbjct: 160 SVCSEIQNLKAREVVVGYD-LSEADEQVLVKQ-----------LNLLLSKETEVYDDVHL 207
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ SL +S+VA G L Y+ ++
Sbjct: 208 IDT----SLTDLESSVA---------------------------------GKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L + +E+ K Y+ + +L++ EN+R+G G+L+ L
Sbjct: 231 QMRELSHLQKAQHYEI-----------KDYLQMSYATKSSLDLLENARTGKKHGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRL 730
+ TA G RLLRTW+ RPL N I ERQ+ + Q F F ++L +
Sbjct: 280 DETKTAMGMRLLRTWIDRPLVNQATITERQNII-------QVFLDNFFERSDLTESLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R V + A K L + L + + AIL+
Sbjct: 333 YDIERLASR---------------VSFGKANPKDLIQLGHTLAQVPV-------IKAILD 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
+ L +L LP + S+++ D D G II G D D K +
Sbjct: 371 SFNDEALSRLLQELDALPELESLIRSAIDP-DAPATITEGGII-RAGFDETLDKYRKVMS 428
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E + + ++R++ G T++ KD Y V S VP + +++ K R+
Sbjct: 429 EGTSWIADIEAKEREVSGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALK-SILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
T + K+ GE+ +A EK S L+ I R+ Q + ++ + + A A + ++
Sbjct: 489 GTAELAKIEGEMLEAR-EKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVL 542
>gi|449329992|gb|AGE96258.1| DNA mismatch repair protein of the muts family [Encephalitozoon
cuniculi]
Length = 922
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 34/323 (10%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M +D L N+E+F+N+ +G TL+ ++ C T FG+RLLR W+ PL I +RQ
Sbjct: 395 MGIDDATLRNMEIFKNNYNGTDEKTLFKAVDFCSTPFGQRLLRRWMMAPLVRKEDIVKRQ 454
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
+ V + ++ + + ++AL R+ D ERLLARL+ NG + K L
Sbjct: 455 EMVLVFKRMD---STKLKEALGRIGDGERLLARLY-----NG----------NPTAKDLS 496
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDWVE 825
+FI L C+ + LG L I+ + I +L + +D E
Sbjct: 497 KFIRCLGACK---ETFDVLGMELRTRRLEGARDIVEKAEDYSCRIEEVLVWHRKVYDVTE 553
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKE---IEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
A I P + + D C + E IE L +L+EQ+ LG SI + +GKD++
Sbjct: 554 AG----ISPG---EENEDELCHLMSEKGKIEGDLDAYLQEQKTRLGCPSIRFRDVGKDVF 606
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EVP+ + VP DY + SS KG RY++ +++KL+ + E + S+L+R I
Sbjct: 607 QMEVPKEI--GVPSDYFIMSSVKGVNRYYSRDLRKLVERYMECEERIFQSKGSLLRRAID 664
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
H +RQ+ A + L
Sbjct: 665 VLLPHVIFFRQVFCELAQVDCYL 687
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 105/199 (52%), Gaps = 20/199 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL +P + + +KQ+W+ K + D ++FFK GKFYEL+E DA VGA+ DL+
Sbjct: 121 YDPSTLLIPEHEYKKFTPFEKQFWDIKKDYFDTIVFFKKGKFYELYENDALVGARLFDLK 180
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS------KD 424
+ GFPE + K GY++ VEQ+E ++R +++ S KD
Sbjct: 181 ITDRVNMKMSGFPEGSLDYWSRKFLEHGYKIARVEQSENMIGKQIRERDEMSKEGRVVKD 240
Query: 425 KVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESNQSPASQSTDRCFG-ICVVDVA 482
K+++RE+ ++T+GT+ + + SA P YLM++ + + C+ C +V
Sbjct: 241 KIIRRELKEIITQGTIYSIDYMRSAMP--MYLMSVA---------TDEVCYSETCSGEVH 289
Query: 483 TSRIILGQVMDDLDCSVLC 501
TS ++ + ++ S C
Sbjct: 290 TSVVLYDASIGEVYFSSFC 308
>gi|367019680|ref|XP_003659125.1| hypothetical protein MYCTH_2295777 [Myceliophthora thermophila ATCC
42464]
gi|347006392|gb|AEO53880.1| hypothetical protein MYCTH_2295777 [Myceliophthora thermophila ATCC
42464]
Length = 1168
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 159/660 (24%), Positives = 266/660 (40%), Gaps = 75/660 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 234 QFLDIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSEAHLDRFA 293
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P +++V++L G++V VV Q ET +K +++ R++ V TKG
Sbjct: 294 SASIPVHRLNVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLTNVYTKG 349
Query: 439 TLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
T + GEL + P YL+ LTES GI V AT I+
Sbjct: 350 TYIDETGELDQPGEGTGAPAGGYLLCLTESPAKGLGADEKVHVGIVAVQPATGDIVYDDF 409
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
D + L + P E++ LS T++ ++RH N + T
Sbjct: 410 EDGFMRREIETRLLHISPCELLI-VGELSKATDK-LVRHLSGSSTN-------VFGDRTR 460
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
V I + AES + A +GD + IL +++ +S + LSA+
Sbjct: 461 VERIPK-SKTMAAESYSHVTQFYAGRAKDGDKRST--AILDKILKLPESVTICLSAM--- 514
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +L + L E + K+ F + + +M+++ LE+LEV+ N+ G+
Sbjct: 515 ITHLTEYGL-EHIFNLTKY-------FQSFSTRQHMLINGTTLESLEVYRNATDQSEKGS 566
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SR 729
L L+ T G+RLLR W+ RPL + + ER AV L + ++ L S
Sbjct: 567 LLWALDKTRTRPGRRLLRKWIGRPLLDRERLEERVAAVEELLENQSTWKVDKLSGLLSSI 626
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
D+ER L R++ K E +S L + + S +
Sbjct: 627 KADLERSLIRIYY------------------GKCTRPELLSTLQTLQRISMEFSRVKTPA 668
Query: 790 ENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR--IIPHGGVDMDYDSAC 846
+ +SR L + LP I +I+ + + + A + G D ++
Sbjct: 669 DTGFKSRVLSEAIC---SLPGIGTIVSGYLNKINPEAARKDDKYTFFREGEETEDIETHK 725
Query: 847 KKVKEIEASLTKHLKEQR-KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ +EA L H ++ KL T +TYVT+ YL+EV + VP + S K
Sbjct: 726 LGIAAVEADLDAHRQDAAAKLSKKTPVTYVTVAGIEYLIEVSNTDLKHVPASWVKISGTK 785
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ TP + +L+ E Q +A + L+ + R V++ A L +L
Sbjct: 786 KLSRFHTPEVVRLMNERDQHREALAAACDAAFADLLKSIAAEYQPLRDAVSSLATLDCLL 845
>gi|421276331|ref|ZP_15727154.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
gi|395878284|gb|EJG89351.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
Length = 844
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 150/659 (22%), Positives = 271/659 (41%), Gaps = 152/659 (23%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLVERGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ +G+ +D+ T + + D S
Sbjct: 116 VD----SSKPDSHNNFLVAIDREGSQ---------YGLAYMDLVTGDFYVTGLSD---FS 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVIGYDL--SEVEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + T E ++ DS LT + G +A G L Y+ ++
Sbjct: 197 YEQETYEDVHLLDSR----------LTTVEG----------------AASGKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELSHLKPVIRYEI-----------KDFLQMDFATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDM 733
+ TA G RLLR+W+ RPL + I ERQ+ V V + E ++L + D+
Sbjct: 280 DETKTAMGMRLLRSWIQRPLIDLDRIIERQEVVQ----VFLDYFFERSDLTESLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG------A 787
ERL +R+ + G+++ K +L Q ++LG A
Sbjct: 336 ERLASRV-----SFGKSNPKDLL-----------------------QLATTLGSVPRIRA 367
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSAC 846
ILE E L +++ +P ++ A + +I GG + +D
Sbjct: 368 ILEGMEQPALAYLIEQLDAIP-------ELENLISAAIAPEAPHVITEGGIIRTGFDETL 420
Query: 847 KKVKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
K + + T + E +R+ G ++ KD Y V S G+VP + ++
Sbjct: 421 DKYRRVLREGTSWIAEIEVKERENSGINTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKA 480
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
+ K R+ T + ++ GE+ +A + + I R+ +G++ + Q +AA
Sbjct: 481 TLKNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIAAV 539
>gi|383938101|ref|ZP_09991324.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
gi|383714987|gb|EID70970.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
Length = 844
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 150/660 (22%), Positives = 278/660 (42%), Gaps = 145/660 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ E K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVEIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ E NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDREGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKENFEDLHLLDSRLATVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RP+ + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPMIDKERIIQRQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S + + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKK 848
E E L +++ +P + S++ A + +I GG + +D K
Sbjct: 370 EGMEQPALAYLIAQLDAIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE-QRKLLGDTSITYVTIG---KDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E + K G++ I+ + I KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTGWIAEIEAKERGNSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A + ++
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|406864269|gb|EKD17315.1| putative DNA mismatch repair protein msh3 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1137
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 157/674 (23%), Positives = 268/674 (39%), Gaps = 99/674 (14%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ E K K MD V+ ++G ++ F DA AK L + + G E P
Sbjct: 219 QFLEIKRKQMDTVLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRYDEHPSEAHLDRFA 278
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P S++ ++L G +V VV Q ET +K +++ R++ V TKG
Sbjct: 279 SASIPVHRLSVHAKRLVGAGLKVGVVRQIETAA----LKKAGDNRNAPFTRKLTNVYTKG 334
Query: 439 TLTEG------ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
T + E A P YL+ +TES GI V AT II
Sbjct: 335 TYVDDIDGLDQETEGAAPATGYLLCITESKAKGWGTDEKVDVGILAVQPATGDIIYDTFE 394
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLVPLSEFWDAE 549
D S L L + P E + L+ T++ +++H N D + + +
Sbjct: 395 DGFMRSELETRLLHIAPCEFLLVGE-LTKATDK-LIKHLSGSSTNQSGDTIRVERVKQGK 452
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEG---DGLTCLPGILSELISTGDSGSQVLS 606
T V E + + A+ L KA N + E D + LP QV
Sbjct: 453 TMVAESHSHVTQFYADKL-KAQENESEKDREQSLLDKVLKLP-------------EQVTL 498
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
L + ++ + L E + K+ F + + +M+L+ L +LEV++N
Sbjct: 499 CLSAMIIHMTEYGL-EHVFDLTKY-------FQSFSTRSHMLLNGNTLTSLEVYQNQTDY 550
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
G+L+ L+ T FG+RLLR W+ PL + + +R AV L+ +Q ++ +A
Sbjct: 551 SEKGSLFWTLDKTKTRFGRRLLRKWVGHPLLDQTQLEDRVSAVEELKDGHQTPKVDKLQA 610
Query: 727 LSR--LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-------CEL 777
L R D+ER L R++ G+ + +L +++ S + G L
Sbjct: 611 LLRNIKIDLERSLIRIY-----YGKCTRPELLTALQTLQRISNEYSYVRGPADAPFKSAL 665
Query: 778 MDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
++ A +SL AI E +++ L D + A + + +
Sbjct: 666 INNAIASLPAIGET------------------VIAFL-------DMISAEAARKDDKYAF 700
Query: 838 VDMDYDSA-CKKVKEIEASLTKHLKEQRKLLGDT-----SITYVTIGKDLYLLEVPESLR 891
D+++ K A++ + L R++ DT I Y T+ YL+EVP
Sbjct: 701 FHEDHETEDITDHKLGIAAVEQELDAHREVATDTLHQRKKIIYSTVAGIEYLIEVPNQDL 760
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKW 951
VP + S K R+ TP++ ++L E Q + +A ++ L+ H+
Sbjct: 761 KRVPASWTKVSGTKKASRFHTPDVIRMLRERDQHKESLSAACETAFHTLLSSISAHYGPL 820
Query: 952 RQMVAATAGLTLIL 965
R ++ + L +L
Sbjct: 821 RDAISGLSTLDCLL 834
>gi|225389117|ref|ZP_03758841.1| hypothetical protein CLOSTASPAR_02863, partial [Clostridium
asparagiforme DSM 15981]
gi|225044816|gb|EEG55062.1| hypothetical protein CLOSTASPAR_02863 [Clostridium asparagiforme
DSM 15981]
Length = 525
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 204/461 (44%), Gaps = 96/461 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPHCGFPER 385
+ + E K ++ D V+F+++G FYE+F DA +KEL++ E P CG P
Sbjct: 3 QHYMETKKQYPDCVLFYRLGDFYEMFFDDALTVSKELEITLTGKECGLPERAPMCGVPFH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L +KGY+V + EQ E P+Q KG +VKRE+ VVT GT+T +
Sbjct: 63 AVDSYLNRLVQKGYKVAIAEQMEDPKQ------AKG----LVKREVIRVVTPGTITSAQA 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + +YLM + TD +G+ D++T ++ +V D
Sbjct: 113 LDETKN-NYLMGIV---------CTDGGYGVSTADISTGDFLVTEVSTDR---------- 152
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
E+ N SP ++++ + F+ + + E+KN Y+
Sbjct: 153 -----ELFDEINKFSP---------------SEIICNNAFYVSGVDIEELKNRYHV---- 188
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTG--------DSGSQVLSALGGTLFYLKK 617
+++ DS+ ++ C +L E G D G+ +++A G L Y+ +
Sbjct: 189 AVSALDSHFFGEES------C-HKVLREHFRVGSLSGLGLEDYGTGIIAA-GAVLQYMYE 240
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ K L + + +M++D NLE+ E R GTL L+
Sbjct: 241 T---------QKSTLEHITTIKPYSTGQFMIIDTSTRRNLELVETMREKQKRGTLLWVLD 291
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
TA G RLLR ++ +PL + I RQ AV L +N E R+ L+ + D+ERL+
Sbjct: 292 KTKTAMGARLLRAYIEQPLIHREEIIARQSAVEEL-NMNYISREEIREYLNPVYDLERLI 350
Query: 738 ARLFASSEANGR------NSNKVVLYEDAAKKQLQEFISAL 772
R+ + AN R NS +++ Y K+ L+EF S L
Sbjct: 351 GRI-SYKTANPRDLISFCNSLEMLPY---IKRLLEEFSSPL 387
>gi|400602694|gb|EJP70296.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1095
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 155/675 (22%), Positives = 276/675 (40%), Gaps = 88/675 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ E K KH+D ++ ++G + F DA + AKEL + + G E P
Sbjct: 187 LTPMELQFLEIKRKHLDTILIVEVGYKFRFFGEDARIAAKELSIVCIPGKMRYDEHPSEA 246
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++ +L G++V VV Q ET +K +++ R++
Sbjct: 247 HLDRFASASIPVHRLPVHARRLVAAGHKVGVVRQVETAAL----KKVGDNRNAPFTRKLT 302
Query: 433 AVVTKGTLTE--GELL------SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
+ TKGT + G+L +A+ YL+ +TES + GI V AT
Sbjct: 303 NLYTKGTYIDENGDLEQTTTGGNASSSGGYLLCITESKAKGSGTDEKVDVGILAVQPATG 362
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
II D S + L + P E + + L+ T++ I L + + D +
Sbjct: 363 DIIYDTFDDGFMRSEIETRLLHISPCEFVIVGD-LTKTTDKLIQHLAGSSTNVFGDRSRV 421
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
+T E + + AE L +A ++ + +L +++ + +
Sbjct: 422 ERVPRTQTMAAEAASHVTQFYAEKLKEASNSQNEQSSS---------LLEKVLQLPEPVT 472
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LSA+ + +L + L+ F+L F + + +M+++ LE+LEV+ N
Sbjct: 473 ICLSAM---ITHLTEYGLEHI------FDL--TKHFESFSTRSHMLVNGTTLESLEVYRN 521
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G+L+ ++ T FG+RLLR W+ RPL N + ER AV L
Sbjct: 522 STDHTERGSLFWAIDKTRTRFGRRLLRKWIGRPLLNQERLEERLAAVQELHD-------- 573
Query: 723 FRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQAC 782
+++ + + D+ERLLA+ + + S + Y + +L + AL Q
Sbjct: 574 -KQSTAPVDDLERLLAK----TRTDLERSLIRIYYGKCTRPELLSVLQAL-------QQI 621
Query: 783 SSLGAILENTESRQLHH--ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI----IPHG 836
SS ++ + ++ LP I+ ++ + D + A + H
Sbjct: 622 SSHYVRVKRPQDVGFDAPLLVDAVLALPQILDLVVSYLDRINLDAARKDDKYGFFRDEHQ 681
Query: 837 GVDM-DYDSACKKVKEIEASLTKHL-----KEQRKLLGDTSITYVTIGKDLYLLEVPESL 890
DM D+ + +E L +H K QRK + YVT+ +L+EVP +
Sbjct: 682 TDDMQDHQMG---IAHVEHQLDQHRAVAADKLQRK----KPVDYVTVAGIEFLIEVPNTD 734
Query: 891 RGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNK 950
VP + S K R+ TP++ +L+ E Q +A + + L+ +
Sbjct: 735 IKRVPASWAKISGTKKVSRFHTPDVVQLIAERDQHREALAAACDTAFKDLLASLAAAYQP 794
Query: 951 WRQMVAATAGLTLIL 965
R V+A A L +L
Sbjct: 795 LRDAVSALATLDCLL 809
>gi|342164735|ref|YP_004769374.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
gi|341934617|gb|AEL11514.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
Length = 844
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 150/655 (22%), Positives = 275/655 (41%), Gaps = 135/655 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ E K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVEIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ E NQ FG+ +D+ T V LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDREGNQ----------FGLAYMDLVTGDFY---VTGLLDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKENFEDLHLLDSRLATVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDME 734
L+ TA G RLLR+W+ RPL + I +RQ+ V G F + +L + D+E
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVVQVFLG--HFFERSDLTDSLKGVYDIE 336
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL +R+ + G+ + K +L QL +S + + AILE E
Sbjct: 337 RLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILEGMEQ 374
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIE 853
L +++ G+P + S++ A + +I GG + +D K + +
Sbjct: 375 PALAYLIEQLDGIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDDTLDKYRRVL 427
Query: 854 ASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
T + E +R+ G +++ KD Y V S G+VP + +++ K R
Sbjct: 428 REGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSER 487
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+ T + ++ G++ +A + + I R+ + ++ + + + A + ++
Sbjct: 488 FGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|157150901|ref|YP_001451304.1| DNA mismatch repair protein MutS [Streptococcus gordonii str.
Challis substr. CH1]
gi|189083199|sp|A8AZU4.1|MUTS_STRGC RecName: Full=DNA mismatch repair protein MutS
gi|157075695|gb|ABV10378.1| DNA mismatch repair protein MutS [Streptococcus gordonii str.
Challis substr. CH1]
Length = 847
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 152/646 (23%), Positives = 264/646 (40%), Gaps = 126/646 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKKDYQDAFLLFRMGDFYELFYEDAVNAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIESGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANP--DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ P + ++L+AL Q+ +G+ +D+AT QV D
Sbjct: 116 VD----SSKPVGENNFLVALDRQEQA---------YGLAYMDLATGEF---QVTSLADFD 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
C + LR E++ E E+ IL N L
Sbjct: 160 QACGEIRNLRAREVV--VGYCLSEDEQQILSKQMNLL----------------------- 194
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
L++ + + + Q GD L+ L E + G + V L +LKK
Sbjct: 195 --------LSEVEEAMEDVQLLGDELSSL-----EKQTAGKLLAYVFQTQMRELSHLKK- 240
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+E+ K ++ +D +L++ EN+R+G G+L+ ++
Sbjct: 241 --------VHHYEI-----------KDFLQMDYATKTSLDLTENARTGKKHGSLFWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE---FRKALSRLPDMER 735
TA G RLLR+W+ PL + G I +RQD V V + E +L + D+ER
Sbjct: 282 TKTAMGGRLLRSWIQHPLIDKGRIIKRQDVVQ----VFLDYFFERSDLADSLKGVYDIER 337
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L++R+ + G+ + K +L QL +S + +ILE ES
Sbjct: 338 LVSRV-----SFGKTNPKDLL-------QLASTLS----------HVPQIRSILETIESP 375
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
L ++ +P + +++ D D + G II G D D ++E +
Sbjct: 376 ALESLVARLDAIPELENLISSAIDP-DAPQVITEGNII-RTGFDETLDQYRLVMREGTSW 433
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
+ ++R+ G T++ KD Y V S G+VP + +++ K R+ T +
Sbjct: 434 IADIEAKEREASGITNLKIDYNKKDGYYFHVTNSQLGNVPSHFFRKATLKNSERFGTEEL 493
Query: 916 KKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
++ GE+ +A + + I R+ +G++ + Q +A
Sbjct: 494 ARIEGEMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQTLATV 539
>gi|158320586|ref|YP_001513093.1| DNA mismatch repair protein MutS [Alkaliphilus oremlandii OhILAs]
gi|158140785|gb|ABW19097.1| DNA mismatch repair protein MutS [Alkaliphilus oremlandii OhILAs]
Length = 874
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 192/429 (44%), Gaps = 84/429 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ E K+++ D ++FF++G FYELF DA ++EL++ ++ + P CG P
Sbjct: 3 QQYMEIKNQYKDALMFFRLGDFYELFFDDAETASRELEITLTARDCGLESKAPMCGVPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++KL KGY+V + EQ E P KG +VKR++ V+T GTL + L
Sbjct: 63 AANGYIDKLVSKGYKVAICEQVEDPSV------AKG----IVKRDVVRVITPGTLIDTNL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L + +YL++L S+ C G VD++T ++ +++ L +S
Sbjct: 113 LEDKKN-NYLVSLYMSSLG--------C-GFSYVDISTGELLSTEIVGTSIEQNLIDEIS 162
Query: 506 ELRPVEIIKPANMLSPETERAI-------LRHTRNPLVNDLVPLSEFWDAETTVL--EIK 556
++ P E+I E E I +R N ++ P W E + +IK
Sbjct: 163 KIEPNELIYFV-----EEEDKIGTNFIEGIRKKLNIHISKYDP----WTFEESYAMNQIK 213
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
N +N +T ESL G L L ++A G + YL
Sbjct: 214 NQFNILTVESL-------------GFSLNHLG----------------INATGALIHYL- 243
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
KS TL K + + MVLD NLE+ E R + G+L L
Sbjct: 244 KSTQKRTLSHINKINIYTFT--------EKMVLDISTRRNLELTETIRGKNKKGSLLWIL 295
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ TA G R++R W+ PL N I R +AVA L+ + E +++L ++ D+ERL
Sbjct: 296 DKTQTAMGGRMIRKWIEEPLLNIQNINRRLEAVATLKN-DILLRCELKESLKQIYDLERL 354
Query: 737 LARL-FASS 744
++ F S+
Sbjct: 355 SGKIAFGSA 363
>gi|449523049|ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 966
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 165/695 (23%), Positives = 296/695 (42%), Gaps = 92/695 (13%)
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-Q 371
DP+ Y P ++Q + K ++ D ++ ++G Y F DA + A+ L +
Sbjct: 127 DPKYKYTPL---------EQQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYA 177
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKRE 430
++ P +++V +L GY+V VV+QTET K GS K R
Sbjct: 178 HLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAI-----KAHGSNKLGPFCRG 232
Query: 431 ICAVVTKGTLTEGELLSANPD-----ASYLMALTESNQSPAS------QSTDRCFGICVV 479
+ A+ TK TL + L + ++YL L E++ S + D G+ +
Sbjct: 233 LSALYTKATLEAAQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKIGMVAM 292
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
+++T +I G+ D+ + L +L L P E++ + +S TE+ +L + P +N
Sbjct: 293 EISTGDVIYGEYDDNFMRNGLEAMLLSLSPAELLL-GDPISKPTEKLLLGYA-GPALNVR 350
Query: 540 VPL--SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
V +F+ + + E+ ++Y I + + +S + + + I+
Sbjct: 351 VERVSGDFFKDGSALAEVMSLYENIDQNNFTEDNSPEKVLVGQKSNRSAIKEIV------ 404
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
+ + L AL T+ +LK+ L+ + + F C K M L L L
Sbjct: 405 -NMPNLALQALALTIRHLKQFGLERIVSLASSFRPFSC--------KMEMTLSGNTLTQL 455
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL----- 712
EV +N+ G +G+L +NH +T FG RLLR W+ PL + +I RQ+AV+ +
Sbjct: 456 EVLKNNDDGSETGSLLHCMNHTLTIFGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMV 515
Query: 713 --------RGVNQPFA--------LEF-----RKALSRLPDMERLLARLFASSEANGR-- 749
R +++ ++ L + L R PD++R + R+F + A
Sbjct: 516 SSKVSPNNRALDEEYSDVIVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFI 575
Query: 750 NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP-GKGLP 808
+ +L+ A KQLQ+F + D CSS +I+ + R+L IL+ GL
Sbjct: 576 AVIQAILF---AGKQLQQF-----HIDEEDDNCSS-ESIIGSKLLRKL--ILSASSSGLI 624
Query: 809 AIVSILKHF--KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
I + L K+A D + N +I + A K+ + L + RK
Sbjct: 625 NIAAKLLSTISKEAADQGDFPN--LMIIYSDQFPKVARARKEAQSAREKLDALITFYRKQ 682
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
LG + + ++ +L+E+ ++ VP + +S K RY P + L ELS A
Sbjct: 683 LGMRKLEFTSVSGTTHLIELAIDVK--VPSQWVKINSTKKTVRYHPPEVLAALDELSLAN 740
Query: 927 SEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
E A + + F ++ +++ V A A +
Sbjct: 741 EELMVASRDAWDDFLRGFSRYYAEFQAAVQALASI 775
>gi|363899230|ref|ZP_09325740.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB1]
gi|395209621|ref|ZP_10398715.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB8]
gi|361959067|gb|EHL12363.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB1]
gi|394705252|gb|EJF12781.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB8]
Length = 902
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 199/464 (42%), Gaps = 93/464 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
LS +Q+ + K ++ D ++F+++G FYE+F DA +KELDL ++ P C
Sbjct: 6 LSPMMRQYLDSKKEYPDALLFYRIGDFYEMFFDDALTASKELDLVLTGKDCGLEERAPMC 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P V KL KGY+V + EQ E P +K KG +VKREI V+T GT
Sbjct: 66 GVPYHAADSYVSKLVSKGYKVAIGEQVEDP------KKAKG----LVKREIIKVITPGTQ 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
TE L + ++LM++ + GI VD+ T V D S
Sbjct: 116 TEETALEEGKN-NFLMSIYLGEKKR---------GIVTVDITTGECYATAV----DSSKE 161
Query: 501 CC-LLSELRPVEI-IKPANMLSPETERAILRHTRNPLVNDLVPLSE-FWDAETTVLEIKN 557
C +S P EI I P S + E + + L E F+
Sbjct: 162 CLDEISRFSPKEILINP----SLKEEEELFSQINSRFSISLTEKEERFF----------- 206
Query: 558 IYNRITAESLNKADSNVA---NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
SL +AD + S G GL+ + + ALGG L Y
Sbjct: 207 --------SLTEADKLITAHFQSSIMGLGLS--------------DQADLRRALGGCLSY 244
Query: 615 L---KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L +K+ L T +R F K YMV+D+ + NLE++E R GT
Sbjct: 245 LYDTQKNLL--THIRRIDF----------FQNKDYMVVDSYSQRNLELWETLREKKKRGT 292
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L++ TA G R+LR +L RPL + I R DAV G E R+ L +
Sbjct: 293 LLWVLDYTKTAMGSRMLRHFLERPLRDKKKIEARLDAVEEFTGHYIDME-ELREYLDSIY 351
Query: 732 DMERLLARLFASSEANGRNSNKVVL---YEDAAKKQLQEFISAL 772
D+ERLL+R+ S+ AN R+ + L Y KK L F S+L
Sbjct: 352 DIERLLSRISLST-ANARDLLALKLSLQYLPDIKKALSPFQSSL 394
>gi|395795681|ref|ZP_10474984.1| DNA mismatch repair protein MutS [Pseudomonas sp. Ag1]
gi|395340141|gb|EJF71979.1| DNA mismatch repair protein MutS [Pseudomonas sp. Ag1]
Length = 863
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 265/635 (41%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAERRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L A + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQAAMTELEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 398 VTTGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDTELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPIDYQRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LI +
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLESLIDKLA 543
>gi|395496877|ref|ZP_10428456.1| DNA mismatch repair protein MutS [Pseudomonas sp. PAMC 25886]
Length = 863
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 265/635 (41%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAERRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L A + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PQLQAAMTELEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 398 VTTSTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDTELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY+ R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPIDYQRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LI +
Sbjct: 509 LKEFEDKALSAKSRALAREKMLYEALLESLIDKLA 543
>gi|402703814|ref|ZP_10851793.1| DNA mismatch repair protein MutS [Rickettsia helvetica C9P9]
Length = 886
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 192/428 (44%), Gaps = 71/428 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ P CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEVPMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G +V R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAIVTRDVTRIITPGTIIEEN 134
Query: 445 LL-SANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
L+ SA P+ YL +L N+ AS +C +D++TS I + + + + +
Sbjct: 135 LIASAKPN--YLASLVIPKNKETAS--------LCYIDLSTSEIFVVNIPE----AEILN 180
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L+ L+P EI+ N+ S S D NI+ ++
Sbjct: 181 ELARLKPREILLSENLRS----------------------SNLAD---------NIFKQL 209
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ DS A ++ E L + ++ G+ + + A+G L YL
Sbjct: 210 NFRITYQVDSFFAVNKCEKIILDFYK--MKDIKGIGEVSNGQICAIGSILEYL------- 260
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
+L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 261 SLTQKQNIPHLPIPRIVNF--HSYMTIDFATRRNLEIVTNSQ-GSSQGSLLSTLNHTVTK 317
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL +L+ PL + I R + +A N + R+ L + D+ER L R+
Sbjct: 318 QGGRLLYNFLSSPLTDILKINHRLN-IAEFFYSNLEIVKKIRELLKKTSDIERCLTRI-T 375
Query: 743 SSEANGRN 750
+ ++GR+
Sbjct: 376 MNRSSGRD 383
>gi|387880492|ref|YP_006310795.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
gi|386793940|gb|AFJ26975.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
Length = 849
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 157/657 (23%), Positives = 273/657 (41%), Gaps = 133/657 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVTAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S FG+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------FGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETELDDVQLLGDQLSEL-----EKKTAGKLLRYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A + ++
Sbjct: 486 ERFGTEELARIEGDMLEARDKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVL 542
>gi|398843145|ref|ZP_10600295.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM102]
gi|398103963|gb|EJL94122.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM102]
Length = 859
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 154/632 (24%), Positives = 265/632 (41%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + E+ + +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMAELEAPHIIQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ K D N +I GGV YDS +++ + + + L
Sbjct: 398 TTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|296805561|ref|XP_002843605.1| DNA mismatch repair protein Msh3 [Arthroderma otae CBS 113480]
gi|238844907|gb|EEQ34569.1| DNA mismatch repair protein Msh3 [Arthroderma otae CBS 113480]
Length = 1134
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 151/672 (22%), Positives = 267/672 (39%), Gaps = 89/672 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE---------- 376
L+ +KQ E K+KH+D V+ ++G ++ + DA + AK L + + G+
Sbjct: 222 LTPMEKQILEIKNKHLDAVLLIQVGYKFQFYGEDARIAAKVLSIVCIPGKLRFDELTTDP 281
Query: 377 -QPH------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKR 429
+ H P ++V++L GY+V VV+Q ET + +++ R
Sbjct: 282 SEAHLTRFASASVPIHRLHVHVKRLVTAGYKVGVVKQLETAA----LKAAGDNRNAPFVR 337
Query: 430 EICAVVTKGTLTE----GELLSA-NPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
++ + TK T E EL A P YL+ LTES GI V AT
Sbjct: 338 KLTNMYTKATYVEDDAENELSGALEPSTGYLLCLTESGAKGQGNGEKVQIGIVAVQPATG 397
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
+I D S + L + P E++ + LS T + + L R D V +
Sbjct: 398 NVIYDNFEDGFMRSEIETRLLHIAPCELLLVGD-LSAATNKLVKHLSKGRMTTFGDNVRI 456
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLP------GILSELIS 596
+ ++T E A S++++ A T P G+ +++
Sbjct: 457 EQMEKSKTAAAE---------------AHSHISSFYAGKMASTGTPEDERASGLFDQVLK 501
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALEN 656
D + LSA+ + +L + L E + K+ F + + +M+L+ L N
Sbjct: 502 LPDDVTICLSAM---IKHLTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTN 550
Query: 657 LEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVN 716
LE+++N S G+L+ +N T FG+RLLR W+ RPL + + ER +AVA L +
Sbjct: 551 LEIYQNQTDYSSRGSLFWSMNRTRTKFGQRLLRRWVGRPLLDKAKLEERIEAVAELLEPD 610
Query: 717 Q-PFALEFRKALSRLP-DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG 774
+ LS++ D+E+ L R++ Y + +L + ++
Sbjct: 611 KSTLTHNLGSILSQVKIDLEKALIRVY---------------YGKCTRPELLTMLKSMQS 655
Query: 775 CELMDQACSSLGAILENTESRQLHHILTPGKG-LPAIVSILKHFKDAFDWVEANNSGRII 833
+ + ++ HIL+ LP I + + + + A +
Sbjct: 656 IAM------GFAHVKSPADTGFTSHILSESIAILPTIYDGVVAYLNKINEAAARKDDKYN 709
Query: 834 PHGGVDMDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV--PES 889
+ + + + IE L HLK + LG YV++ YL+EV +S
Sbjct: 710 FFRESEETEEIGEHRLMIGTIEYELKDHLKSIAETLGKKKAQYVSVAGIDYLVEVENSQS 769
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
VP + S K R+ TP + K++ E Q + +A L+ +
Sbjct: 770 TLKKVPASWRKISGTKKVSRFHTPEVVKMMRERDQQKESLAAACDKAFLDLLADISTKYQ 829
Query: 950 KWRQMVAATAGL 961
+R + A A +
Sbjct: 830 LFRDCIQALATI 841
>gi|404496284|ref|YP_006720390.1| DNA mismatch repair protein MutS [Geobacter metallireducens GS-15]
gi|418064991|ref|ZP_12702367.1| DNA mismatch repair protein MutS [Geobacter metallireducens RCH3]
gi|123572094|sp|Q39VR6.1|MUTS_GEOMG RecName: Full=DNA mismatch repair protein MutS
gi|78193891|gb|ABB31658.1| DNA mismatch repair ATPase MutS-1 [Geobacter metallireducens GS-15]
gi|373563264|gb|EHP89465.1| DNA mismatch repair protein MutS [Geobacter metallireducens RCH3]
Length = 872
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 161/621 (25%), Positives = 255/621 (41%), Gaps = 124/621 (19%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KG----E 376
+ L+ +Q+ E K+ H D ++FF++G FYE+F DA ++ LD+ KG +
Sbjct: 1 MSELTPMMRQYLEIKADHPDSILFFRLGDFYEMFLDDAVKASRILDITLTSRGKGGDGAD 60
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P CG P + + + KL G +V + EQ E P + KG +VKR++ VVT
Sbjct: 61 VPLCGVPYHSAAPYIAKLIEAGEKVAICEQVEDP------KTTKG----IVKRQVVKVVT 110
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV--MDD 494
G + E E LS + ++L++L + N +G+ +D++T L +V D
Sbjct: 111 PGLVVESESLSPKEN-NFLLSLFDGNNGR--------WGVAYLDISTGEFRLTEVEGHDA 161
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
V C P EI+ PA+ + R DL F + V
Sbjct: 162 AWGEVACA-----NPREILVPASFRE---------NMRGEGRGDLAAGRTFTYVDDWV-- 205
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
Y+R E L K VA+ A G C D ++ L A L Y
Sbjct: 206 ----YDRDYTERLIKNHFGVASPGALG----C------------DGYAEGLQAAAAVLHY 245
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
L+++ K + + ++VLD NLE+ G G+L
Sbjct: 246 LQET---------QKGRVDHIRELRAYRTQEFLVLDEATRRNLELTATLSEGKRRGSLLG 296
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDM 733
L+ TA G R LR W+ PL I+ERQDAV L N P R+AL + D+
Sbjct: 297 LLDRTATAMGGRKLRQWINYPLVIVEKIKERQDAVGEL--ANDPALRAGIREALEGVYDL 354
Query: 734 ERLLARL-FASSEANGRNSNKVVLYEDAAKKQLQEFISALH--GCELMDQACSSLGAILE 790
ERL R+ ASS A K ++ A+ +++ +S L G L+ + C + + E
Sbjct: 355 ERLNGRISLASSGA------KDLVALKASLQRIPPLLSLLESTGTALLGELCKGIDPMDE 408
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKV 849
E G+G+ ++ ++ GG+ D Y + ++
Sbjct: 409 VAE--------LIGRGI------------------VDDPPFVLREGGIIADGYHAELDEL 442
Query: 850 KEIE---ASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSS 903
+ I L+ + K T IT + I + Y +EV ++ GS+P DY R +
Sbjct: 443 RAISREGKGFIARLEAKEK--ARTGITSLKIRYNKVFGYYIEVTKTNLGSIPEDYIRRQT 500
Query: 904 KKGFFRYWTPNIK----KLLG 920
R+ TP +K K+LG
Sbjct: 501 LANAERFITPELKEYEEKVLG 521
>gi|51473494|ref|YP_067251.1| DNA mismatch repair protein MutS [Rickettsia typhi str. Wilmington]
gi|81692305|sp|Q68X73.1|MUTS_RICTY RecName: Full=DNA mismatch repair protein MutS
gi|51459806|gb|AAU03769.1| DNA mismatch repair protein MutS [Rickettsia typhi str. Wilmington]
Length = 891
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 190/430 (44%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCG 381
++ +Q+ + K H+D ++ F+MG FYELF DA + + L + K E P CG
Sbjct: 21 TKMMQQYLDIKFAHLDCLLLFRMGDFYELFYEDAILASNILGIALTKRGKNCEEEIPMCG 80
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ K++G VV R++ ++T GT+
Sbjct: 81 VPYHALEHYLTKLITENYKVAICDQLETPEE----AKKRGGYKAVVTRDVTRIITPGTII 136
Query: 442 EGELLSANPDASYLMALTES-NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+SA + +YL +L + N+ AS IC VD++TS+I + V + + +
Sbjct: 137 EENLISA-AEPNYLTSLVMTKNKKTAS--------ICYVDLSTSKIFIVNVPE----TEI 183
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+ EI+ N+ S +IL+ ++ T Y
Sbjct: 184 LNELARLKSREILLSENLKSSNLADSILKQ---------------FNCRIT-------YQ 221
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ ++NK + + + D + GI G+ S + A+G L YL
Sbjct: 222 VDSFFAINKCEKIILDFYKIRD----IKGI-------GEISSSQICAIGSILEYL----- 265
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ N + G+ G++ LNH V
Sbjct: 266 --SLTQKQNIPNLPIPKIINF--HSYMTIDFSTRRNLEIVTNIQ-GNLHGSVLNTLNHTV 320
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L D+ER L R+
Sbjct: 321 TKQGGRLLYHFLSSPLTNIAKINRRLNITEFFYS-NLGIVTRIRELLKNTSDIERCLTRI 379
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 380 -TMNRSSGRD 388
>gi|424071222|ref|ZP_17808648.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999155|gb|EKG39542.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 859
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 153/636 (24%), Positives = 251/636 (39%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA S L A H+
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMSDLDA----------PHL 393
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 394 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|383752268|ref|YP_005427368.1| DNA mismatch repair protein MutS [Rickettsia typhi str. TH1527]
gi|383843104|ref|YP_005423607.1| DNA mismatch repair protein MutS [Rickettsia typhi str. B9991CWPP]
gi|380758911|gb|AFE54146.1| DNA mismatch repair protein MutS [Rickettsia typhi str. TH1527]
gi|380759751|gb|AFE54985.1| DNA mismatch repair protein MutS [Rickettsia typhi str. B9991CWPP]
Length = 886
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 190/430 (44%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCG 381
++ +Q+ + K H+D ++ F+MG FYELF DA + + L + K E P CG
Sbjct: 16 TKMMQQYLDIKFAHLDCLLLFRMGDFYELFYEDAILASNILGIALTKRGKNCEEEIPMCG 75
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ K++G VV R++ ++T GT+
Sbjct: 76 VPYHALEHYLTKLITENYKVAICDQLETPEE----AKKRGGYKAVVTRDVTRIITPGTII 131
Query: 442 EGELLSANPDASYLMALTES-NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+SA + +YL +L + N+ AS IC VD++TS+I + V + + +
Sbjct: 132 EENLISA-AEPNYLTSLVMTKNKKTAS--------ICYVDLSTSKIFIVNVPE----TEI 178
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+ EI+ N+ S +IL+ ++ T Y
Sbjct: 179 LNELARLKSREILLSENLKSSNLADSILKQ---------------FNCRIT-------YQ 216
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ ++NK + + + D + GI G+ S + A+G L YL
Sbjct: 217 VDSFFAINKCEKIILDFYKIRD----IKGI-------GEISSSQICAIGSILEYL----- 260
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ N + G+ G++ LNH V
Sbjct: 261 --SLTQKQNIPNLPIPKIINF--HSYMTIDFSTRRNLEIVTNIQ-GNLHGSVLNTLNHTV 315
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L D+ER L R+
Sbjct: 316 TKQGGRLLYHFLSSPLTNIAKINRRLNITEFFYS-NLGIVTRIRELLKNTSDIERCLTRI 374
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 375 -TMNRSSGRD 383
>gi|237800178|ref|ZP_04588639.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331023035|gb|EGI03092.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 859
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 153/634 (24%), Positives = 254/634 (40%), Gaps = 126/634 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 219 STQDLKGFGCENLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 266
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T+ +LDA NLE+ N SG TL + ++ C TA
Sbjct: 267 TV-----------------------ILDAATRRNLELDIN-LSGGRDNTLQSVMDRCQTA 302
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + +++ RQ ++A +++ + L + D+ER+LAR+
Sbjct: 303 MGTRLLTRWLNRPLRDLPILQARQTSIACF--LDRYRFEHLQPQLKEIGDIERILARI-- 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
RN+ D A+ L++ +SAL L + + ++ L +
Sbjct: 359 ----GLRNARP----RDLAR--LRDALSAL----------PELQKAMADLDTPHLQQLAQ 398
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + +L+ +N +I GGV YD+ ++ + + + L
Sbjct: 399 TASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFLI 451
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y + Y +E+P P DY R + KG R+ TP +
Sbjct: 452 DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPPDYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFC 945
K K L S+A + ++ +++L+ LIG
Sbjct: 510 KEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|358465299|ref|ZP_09175249.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 058
str. F0407]
gi|357065794|gb|EHI75969.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 058
str. F0407]
Length = 844
Score = 120 bits (301), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 148/659 (22%), Positives = 273/659 (41%), Gaps = 143/659 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S PD+ ++L+AL FG+ +D+ T V LD +
Sbjct: 116 VD----STKPDSQNNFLVALDRDGSQ---------FGLAYLDLVTGDFY---VTGLLDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--SEAEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + + E ++ DS +A + +A L Y+ ++
Sbjct: 197 YEKESFEDIHLLDSRLAAVEQ--------------------------AAASKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L +
Sbjct: 280 DETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL +S + + AILE
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKV 849
E L +++T G+P + S++ A + +I GG + +D K
Sbjct: 371 GMEQPALAYLITQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDKY 423
Query: 850 KEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ + T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 424 RRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLK 483
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + I R+ + ++ + + + A + ++
Sbjct: 484 NSERFGTEELARIEGDMLEAREKSAKLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|392380970|ref|YP_005030166.1| DNA mismatch repair protein MutS [Azospirillum brasilense Sp245]
gi|356875934|emb|CCC96682.1| DNA mismatch repair protein MutS [Azospirillum brasilense Sp245]
Length = 900
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 196/438 (44%), Gaps = 89/438 (20%)
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------ 370
+ +PPD ++ Q+ E K H D ++F++MG FYE+F DA A+ LD+
Sbjct: 11 ITIPPDATPMMA----QYLEIKQAHPDCLLFYRMGDFYEMFFEDAVNAARTLDIALTKRG 66
Query: 371 QYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
Q++ + P CG P + +++L R+G+RV + EQ E P + K++GSK VVKR
Sbjct: 67 QHLGEDIPMCGVPVHSHESYLQRLIRQGFRVAICEQMEDPAE----AKKRGSK-SVVKRG 121
Query: 431 ICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+ +VT GTLTE LL + +++L A+ E+ G+ ++++T +++
Sbjct: 122 VIRIVTPGTLTEDSLLDSRA-SNWLAAVAEAAGG---------LGLAWLELSTGELVVQP 171
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANML-SPETERAILRHTRNPLVNDLVPLSEFWDAE 549
V + + L L L P E++ + SP+ L E W
Sbjct: 172 V----ERAGLGAALGRLDPQEVLVSEKLCQSPD-------------------LYELWG-- 206
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
E K +R+T + + DS + L L G+ L + G ++A G
Sbjct: 207 ----EWK---SRLTVQPTPRFDSENGRQR-----LLTLYGV-GTLDAYGQFSRAEVAAAG 253
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
+ Y+ E + L P G A M +DA NLE + +GD
Sbjct: 254 ALVAYV------ELTQKGRVPRLSPPRRLGPGA---VMEIDAATRRNLE-LTRTLTGDRR 303
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-------E 722
G+L A ++ VT G RLL L+ PL N I +R D V FAL +
Sbjct: 304 GSLLATIDRTVTGAGARLLAAQLSAPLTNPAAIAKRLDMV--------EFALNEERLRGD 355
Query: 723 FRKALSRLPDMERLLARL 740
R+AL R PD+ER L+RL
Sbjct: 356 LREALRRCPDLERALSRL 373
>gi|121711343|ref|XP_001273287.1| DNA mismatch repair protein Msh3, putative [Aspergillus clavatus
NRRL 1]
gi|190359844|sp|A1CDD4.1|MSH3_ASPCL RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|119401438|gb|EAW11861.1| DNA mismatch repair protein Msh3, putative [Aspergillus clavatus
NRRL 1]
Length = 1130
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 159/684 (23%), Positives = 279/684 (40%), Gaps = 112/684 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH------ 379
+KQ E K KHMD V+ ++G Y F DA + AKEL + + G E P
Sbjct: 222 EKQVIEIKRKHMDTVLVIEVGYKYRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAHLDR 281
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P ++V++L GY+V VV Q ET + +++ R++ + T
Sbjct: 282 FASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAA----LKAAGDNRNAPFSRKLTNLYT 337
Query: 437 KGTL----------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
KGT T A+P YL+ +TE+N GI V T I
Sbjct: 338 KGTYVDDVEGLEGPTPAASGGASPATGYLLCITETNAKGWGNDERVHVGIVAVQPNTGDI 397
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLVPLS 543
I D S + L + P E++ LS TE+ +++H +N D V +
Sbjct: 398 IYDDFEDGFMRSEVETRLLHIAPCELVIVGE-LSKATEK-LVQHLSGSKLNTFGDKVRVE 455
Query: 544 EFWDAETTVLE----IKNIY-NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG 598
+T V E + N Y +++ A S++ D+ +N +L ++++
Sbjct: 456 RVGKKKTAVAESHSHVANFYASKLKAASVD--DTQTSN-------------LLQKVLTLP 500
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
+ QV L + ++ + L E + + K+ F + + +M+L+A L +LE
Sbjct: 501 E---QVTVCLSAMIEHMTEYGL-EHIFQLTKY-------FQHFSSRSHMLLNANTLVSLE 549
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
+++N + G+L+ L+ T FG+RLLR W+ RPL + + ER +AV L+ +
Sbjct: 550 IYQNQTDHSTKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSRLEERVNAVEELKNPEKT 609
Query: 719 FALE-FRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE 776
+E ++ L R+ D+E+ L R++ K E ++ L +
Sbjct: 610 VQVERLKRLLGRIKSDLEKNLIRIY------------------YGKCTRPELLTVLQTLQ 651
Query: 777 LMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG 836
+ Q + + + +N +P G A+ S+ KD ++ +I H
Sbjct: 652 TIAQEYADVKSPEDNG-------FASPVLG-EAVASLPTILKDVVAFL-----NKINMHA 698
Query: 837 GVDMDYDSACKKVKEIE---------ASLTKHLKEQRKLLGDT----SITYVTIGKDLYL 883
D ++ +E + AS+ L+E R + + YVT YL
Sbjct: 699 ARSDDKYEFFRESEETDEISEHKLGIASVEHELEEHRAVAAGILKWPKVVYVTSSGIEYL 758
Query: 884 LEVPESLRG--SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
+EV + VP + S K R+ TP + +LL + Q + +A L+
Sbjct: 759 IEVENTSNAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDKAFAALL 818
Query: 942 GQFCEHHNKWRQMVAATAGLTLIL 965
+ ++ +R V A A L +L
Sbjct: 819 AEIAVNYQLFRDCVQALATLDCLL 842
>gi|421138341|ref|ZP_15598406.1| DNA mismatch repair protein [Pseudomonas fluorescens BBc6R8]
gi|404510509|gb|EKA24414.1| DNA mismatch repair protein [Pseudomonas fluorescens BBc6R8]
Length = 859
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 265/635 (41%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 169 RVNPVELMIPDDWPKDLPAERRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 215 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 298 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDRYRFEKLQPQLKEIGDIERILARI- 354
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L A + E+ L +
Sbjct: 355 -----GLRNARP----RDLAR--LRDALGAL----------PQLQAAMTELEAPHLQQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 394 VTTGTYPELAALLE--KAIID-----NPPAIIRDGGVLKTGYDTELDELQSLSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY+ R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPIDYQRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LI +
Sbjct: 505 LKEFEDKALSAKSRALAREKMLYEALLESLIDKLA 539
>gi|330807814|ref|YP_004352276.1| DNA mismatch repair protein, MutS Family domain V [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|423695601|ref|ZP_17670091.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Q8r1-96]
gi|327375922|gb|AEA67272.1| DNA mismatch repair protein, MutS Family domain V [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|388008994|gb|EIK70245.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Q8r1-96]
Length = 859
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 154/634 (24%), Positives = 263/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGMAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDRYRFEQLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YD+ +++ + + + L
Sbjct: 398 RTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDELQALSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYVRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|440744169|ref|ZP_20923473.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP39023]
gi|440374183|gb|ELQ10919.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP39023]
Length = 859
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 252/636 (39%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E + + D A + + LD NL SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERIDDTVILDAASRRNLELDT----NL-------SGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA S L E+ L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMSDL-------EAPHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTASTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|336477855|ref|YP_004616996.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
gi|335931236|gb|AEH61777.1| DNA mismatch repair protein MutS [Methanosalsum zhilinae DSM 4017]
Length = 881
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 159/656 (24%), Positives = 265/656 (40%), Gaps = 115/656 (17%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQ 377
+ L+ Q+++FK ++ D +IFF+MG FYE F+ DA ++ELD+ GE+
Sbjct: 1 MSKLTPAMSQYYQFKKEYSDCIIFFRMGDFYETFDQDAKTVSRELDITLTSRGKGKSGEK 60
Query: 378 -PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P G P + + +L +KGY+V + EQ E P++ + K + T
Sbjct: 61 MPLAGIPYHSIDNYLPRLIKKGYKVAICEQLEDPKKAKGVVKRGVVRVV----------T 110
Query: 437 KGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
GT + + N +YLMA++ + FG+ DV+T + Q D
Sbjct: 111 PGTAIDSSMFE-NAANNYLMAISGNGND---------FGLSFFDVSTGEFLTTQFSDSPP 160
Query: 497 CSVLCCLLSELRPVE-IIKPANMLSPE-TERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ ++ + P E II P+ P+ +ER +N+L + +D ET
Sbjct: 161 YDRVAGEVARMSPAECIICPSLAEDPDLSER----------LNELNIVINHFDTET---- 206
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
++ + AE K V S EG G L +S +
Sbjct: 207 ----FDPVNAEKNLKDHFKV--STLEGMGCEGLTYSISAAGAA----------------- 243
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+D + L D +M+LD+ L NLEV N R S T+
Sbjct: 244 -LAYAMDTQMRELGHVHTLRTYSDSD-----FMILDSITLRNLEVVRNVRGEGKSATILG 297
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDME 734
L+ +T G R+L+ W+ +PL ++ I +R DAV N + R LSR+ D+E
Sbjct: 298 VLDDTMTPMGSRILQKWILKPLISTSDINKRLDAVEEFTH-NTLLRYDIRSHLSRVRDIE 356
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF--ISALHGCELMDQACSSLGAILENT 792
RL R+ NSN L A KK L+ I +L + S G + + +
Sbjct: 357 RLTGRIVYG------NSNARDLV--ALKKSLEAVPEIRSLQKEMDSEMIVSLTGQLYDFS 408
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
+ L ++ G VS+ G +I G Y + +++
Sbjct: 409 QLESLIDLIDCGIVDEPPVSV--------------RDGGLIKSG-----YSTELDEIR-- 447
Query: 853 EASLTKHLKE-----QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSK 904
+++H KE Q++ T I + +G + Y +EV ++ VP DY ++ +
Sbjct: 448 --GMSRHGKEWIASFQKRERERTGIKSLKVGYNKVFGYYIEVTKANSSQVPEDYIIKQTM 505
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG 960
R++TP +KK + A+ EK + L+ L I ++K Q A G
Sbjct: 506 ANSERFYTPELKKWEEAIISAD-EKITTLEYELFSEINSKISDYSKQLQKTADVIG 560
>gi|238597753|ref|XP_002394415.1| hypothetical protein MPER_05696 [Moniliophthora perniciosa FA553]
gi|215463410|gb|EEB95345.1| hypothetical protein MPER_05696 [Moniliophthora perniciosa FA553]
Length = 316
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 170/366 (46%), Gaps = 61/366 (16%)
Query: 356 LFEMDAHVGAKELDLQYMKGEQPHCGF---PERNFSMNVEKLARKGYRVLVVEQTETPEQ 412
L+E DA + + L L + + C + PE +F+ K KGY+V VEQ ET
Sbjct: 1 LYEDDARMAIRNLTLSSLS--ESRCVWWASPEMSFNFWAAKFLGKGYKVGKVEQAETALG 58
Query: 413 LELR-----RKEK---GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQS 464
E+R +K K G K+K+V+RE+ V T GTL +GE+++ + +A + +++ E
Sbjct: 59 AEMRLAADKKKGKPAGGEKEKIVRRELNKVYTNGTLVDGEMIT-DDEAGHCISIREIECE 117
Query: 465 PASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETE 524
+ +T FGICV+D +TS+ L DD+ + L L+ ++RP EI+ LS T
Sbjct: 118 DDACNT---FGICVLDCSTSQFNLSVFQDDICRTKLETLMRQVRPKEIVFTKGNLSVSTT 174
Query: 525 RAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGL 584
R L+ ++P + W T + E++ + T + L + EG+
Sbjct: 175 R---------LLKSILPAACIW---TGLREVEGLDYEATLKELKTRYPAEDETMEEGE-- 220
Query: 585 TCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKK 644
LP YL++ +D+ +L F + + M K
Sbjct: 221 -LLPST-----------------------YLQQLNIDKDILTMKNFNI-----YDPMKKG 251
Query: 645 PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRE 704
+VLD L ++EV N+ G G+L LN C+T FGKRL R WL PL NS I
Sbjct: 252 EGLVLDGQTLAHIEVLLNNE-GTEEGSLLKLLNRCITPFGKRLFRIWLCMPLRNSADINA 310
Query: 705 RQDAVA 710
+ A++
Sbjct: 311 KLAALS 316
>gi|389683302|ref|ZP_10174634.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis O6]
gi|388552815|gb|EIM16076.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis O6]
Length = 855
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 157/634 (24%), Positives = 259/634 (40%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E K++ +
Sbjct: 169 RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L + LT G L+S + +AL L L+ LD+
Sbjct: 215 STQDLKGFGC---------ENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHERLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T +VLD + NLE + + +G TL + ++ C TA
Sbjct: 263 T-----------------------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLL WL RPL + +++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 299 MGSRLLTRWLNRPLRDLKVLQARQTSIGCLL---DGYRFERLQPQLKEIGDIERILARI- 354
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ ++AL L + E+ L +
Sbjct: 355 -----GLRNARP----RDLAR--LRDALAAL----------PELQVAMTELEAEHLSQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YD+ +++ + + + L
Sbjct: 394 VTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDTELDELQSLSENAGQFL 446
Query: 861 KE------QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
E R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 447 IELEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LIG
Sbjct: 505 LKAFEDKALSAKSRALAREKMLYEALLETLIGHL 538
>gi|388470063|ref|ZP_10144272.1| DNA mismatch repair protein MutS [Pseudomonas synxantha BG33R]
gi|388006760|gb|EIK68026.1| DNA mismatch repair protein MutS [Pseudomonas synxantha BG33R]
Length = 859
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 266/635 (41%), Gaps = 128/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLVKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLSVLDITSGNF---SVLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E +K++ +
Sbjct: 169 RINPVELLIPDDWPKDLPAEKRRGTKR--RAP-----------WDFERDS-ALKSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 215 SVQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + +++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 298 AMGSRLLTRWLNRPLRDLTVLQARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 354
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ +SAL +L + ++ L +
Sbjct: 355 -----GLRNARP----RDLAR--LRDALSALPQLQLA----------MTELDTPHLQQLA 393
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N II GGV YD+ +++ + + + L
Sbjct: 394 VTAGTYPDLAALLE--KAIID-----NPPAIIRDGGVLKTGYDNELDELQSLSENAGQFL 446
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P S P DY+ R + KG R+ TP
Sbjct: 447 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPIDYQRRQTLKGAERFITPE 504
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LI +
Sbjct: 505 LKEFEDKALSAKSRALAREKMLYEALLEDLISRLA 539
>gi|346979339|gb|EGY22791.1| DNA mismatch repair protein Msh3 [Verticillium dahliae VdLs.17]
Length = 1144
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 152/635 (23%), Positives = 257/635 (40%), Gaps = 86/635 (13%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
+ L+ + Q+ + K KHMD V+ ++G + F DA + A+EL + + G E P
Sbjct: 203 KKLTPMEMQFLDIKRKHMDTVLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPS 262
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++ ++L G++V VV Q ET +K +++ R+
Sbjct: 263 ESHLDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRK 318
Query: 431 ICAVVTKGTLTE--GELLS----ANPDASYLMALTESNQSPASQSTDRCF--GICVVDVA 482
+ V TKGT + GEL + P A YL+ +TE+ Q TD GI V A
Sbjct: 319 LTNVYTKGTYIDENGELDAQGENGAPAAGYLLCITETPSK--GQGTDEKVDVGIVAVQPA 376
Query: 483 TSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN----- 537
T II D S + L + P E + + L+ T++ ++RH N
Sbjct: 377 TGDIIYDNFEDGFMRSEIETRLLHISPCEFVIVGD-LTKGTDK-MIRHLSGSSTNVFGDR 434
Query: 538 ---DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
+ VP S+ AE Y +T +K A S G + +L ++
Sbjct: 435 SRVERVPRSKTMAAEA--------YTHVTQFYADKMKDTAAESADNGTAVL----LLDKV 482
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPAL 654
+ ++ + LSA+ + +LK+ L E + K+ F + +M+++ L
Sbjct: 483 LHLPEAVTICLSAM---ITHLKEYGL-EHIFDLTKY-------FQSFTTRQHMLINGSTL 531
Query: 655 ENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL-R 713
E+LEV+ NS G+L+ L+ T FG+RLLR W+ RPL + + ER AV +
Sbjct: 532 ESLEVYRNSTDHTEHGSLFWALDKTSTRFGQRLLRKWVGRPLLDDSQLAERVAAVEEIAN 591
Query: 714 GVNQPFALEFRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
G P + L + D+ER L R++ AK E ++ L
Sbjct: 592 GQGTPQVDKLEALLVGIKTDLERSLIRMY------------------YAKCSRPELLAVL 633
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR- 831
+ + +++ + + L I LP I+ + + D + A +
Sbjct: 634 QSLQRIATQYATIKTASDIGFASPL--ITNALLSLPHILDTIISYLDKINPEAARKDDKY 691
Query: 832 -IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLLEVPES 889
+ D + +E L +H ++ LG + YVT+ YL+EV +
Sbjct: 692 NFFREAEQNDDIQDFKMGIVAVEQELDEHRRDAAAKLGRKKPVDYVTVAGIEYLIEVLNT 751
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
+VP + S K R+ TP +LL Q
Sbjct: 752 DLKNVPASWAKISGTKKLSRFHTPEAVRLLAARDQ 786
>gi|378949103|ref|YP_005206591.1| protein MutS [Pseudomonas fluorescens F113]
gi|359759117|gb|AEV61196.1| MutS [Pseudomonas fluorescens F113]
Length = 859
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 154/634 (24%), Positives = 263/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGMAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDRYRFEQLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YD+ +++ + + + L
Sbjct: 398 RTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYVRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|226945906|ref|YP_002800979.1| DNA mismatch repair protein MutS [Azotobacter vinelandii DJ]
gi|259511162|sp|C1DSR1.1|MUTS_AZOVD RecName: Full=DNA mismatch repair protein MutS
gi|226720833|gb|ACO80004.1| DNA mismatch repair protein MutS [Azotobacter vinelandii DJ]
Length = 855
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 160/637 (25%), Positives = 257/637 (40%), Gaps = 132/637 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K +H D+++F++MG FYELF DA AK LD+ Q P G P
Sbjct: 12 QQYWKLKREHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSAGKSIPMAGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V + EQ P + V+R++ ++T GT+++ L
Sbjct: 72 SVEGYLAKLVKLGESVAICEQIGDP----------ATTKGPVERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ ++D+ + R + ++ L L
Sbjct: 122 LDERRD----------NLLAAVVGDERLFGLAILDITSGRFNVQEIQG---WENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R H R P WD + + Y +
Sbjct: 169 RLNPAELLYPDDWPAGLPLEKRRGA--HRRAP-----------WD-----FDFDSAYKSL 210
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFLD 621
+ A ++ +G GL G L++ ++ L L G L+ LD
Sbjct: 211 CQQF---ATQDLKGFGCDGLGLAI--GAAGCLLAYARETQRTALPHLRG----LRHERLD 261
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+T ++LD + NLE+ N SG TL + ++ C T
Sbjct: 262 DT-----------------------VILDGASRRNLELDVNL-SGGRDNTLQSVIDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQD VA L Q + E + L + D+ER+LAR+
Sbjct: 298 AMGSRLLGRWLNRPLRDRAVLEARQDTVACLL---QDYRFESLQPQLKEIGDVERILARI 354
Query: 741 FASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
N R + L + AA QLQ +S L L QA + G I
Sbjct: 355 ---GLRNARPRDLARLRDALAALPQLQTALSPLEAPHL--QALA--GNI----------- 396
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTK 858
+ P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 -----RTYPELAELLRR-------AIIDNPPAVIRDGGVLKQGYDAELDELLSLSENAGQ 444
Query: 859 HL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L ++ R L + + Y I Y +E+P P DY R + KG R+ T
Sbjct: 445 FLMDLEAREKARTGLPNLKVGYNRIHG--YYIELPRVQAEQAPADYIRRQTLKGAERFIT 502
Query: 913 PNIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
P +K K L S+A + +++ + +L+ LI Q
Sbjct: 503 PELKAFEDKALSAKSRALAREKALYEELLEILIAQLA 539
>gi|86610157|ref|YP_478919.1| DNA mismatch repair protein MutS [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123500848|sp|Q2JIA6.1|MUTS_SYNJB RecName: Full=DNA mismatch repair protein MutS
gi|86558699|gb|ABD03656.1| DNA mismatch repair protein MutS [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 884
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 177/666 (26%), Positives = 273/666 (40%), Gaps = 113/666 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHC 380
L+ + + E K ++ ++ +++G FYE+F DA ++EL+L G P C
Sbjct: 6 LTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQRVSRELELVLTGREAGAIGRVPMC 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P F +L KGY + V +Q E +Q KG +V+RE+ V+T GT+
Sbjct: 66 GIPYHAFDRYAAQLVAKGYALAVCDQMEPADQ------AKG----LVRREVTRVITPGTV 115
Query: 441 TEGELLSANPDASYLMA---LTESNQSPASQSTDRCFGICVVDVATSRIILGQV--MDDL 495
E ELL A + +YL A L S Q+P +G+ D++T + Q + L
Sbjct: 116 LEEELLQARQN-NYLAAVVRLKGSKQAPCR------WGLAYADISTGEFWVCQSEGQEQL 168
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
+ L+ L+P E++ P TE + P + PL L
Sbjct: 169 EQE-----LARLQPAEVLLP-------TEEGLGLGLIRP-GDPQKPLG---------LPN 206
Query: 556 KNIYNRITAE--SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
+ Y AE L A N+ + GL L G+ E + + A GG L
Sbjct: 207 QYAYTLRPAEPFELAVARENLMQTY----GLRSLEGLGCEGLPLA------VRAAGGLLH 256
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKP--------YMVLDAPALENLEVFENSRS 665
YL+++ + + K L P G P Y++LDA NLE+ + R
Sbjct: 257 YLEETHSPQRCVA-PKTLLQPSPQGGHPLLPPPRTYQLTDYLILDAQTRRNLELTQTIRE 315
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G G+L L+H TA G R LR WL +PL +S IR RQD + L N
Sbjct: 316 GAFVGSLLWVLDHSRTAMGGRTLRRWLLQPLRDSEQIRLRQDTIQELLE-NPSLRARLGS 374
Query: 726 ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFIS-----ALHGCELMD 779
L L D+ERL R+ S AN R V L K QL E + L + +D
Sbjct: 375 LLDSLYDLERLANRV-GSGTANPR--ELVALGSSLGKLPQLAELVGEAKTPLLQSLQQVD 431
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
A LG R++ H L P P I++ G I P GVD
Sbjct: 432 PALVDLG--------RRIEHTLLPSP--PPILT---------------EGGLIRP--GVD 464
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDY 898
+ D ++V++ + + K +R G ++ V K Y L + + VP++Y
Sbjct: 465 PELDRLRQQVEQDRQWVAQLEKSERDRTGIPTLK-VGFNKAFGYYLSISRAKAHQVPKEY 523
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAES---EKESALKSILQRLIGQFCEHHNKWRQMV 955
+ + R+ TP +K+ + A++ ++E L L++ G E + Q +
Sbjct: 524 IRKQTLTNEERFITPELKEKEARILTAQTDINQREYELFVQLRQEAGSRAEAIRQVAQTL 583
Query: 956 AATAGL 961
AA L
Sbjct: 584 AAVDAL 589
>gi|423097032|ref|ZP_17084828.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Q2-87]
gi|397888160|gb|EJL04643.1| DNA mismatch repair protein MutS [Pseudomonas fluorescens Q2-87]
Length = 859
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 154/634 (24%), Positives = 262/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGMAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELLIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLAYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L +++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLTARQSSITCL--LDRYRFEQLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTDLEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L K D N +I GGV YD+ +++ + + + L
Sbjct: 398 RTTSTYPELAALLA--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|66044624|ref|YP_234465.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
B728a]
gi|81308440|sp|Q4ZWP5.1|MUTS_PSEU2 RecName: Full=DNA mismatch repair protein MutS
gi|63255331|gb|AAY36427.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
B728a]
Length = 859
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 252/636 (39%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPPGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA S L A L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMSDLDA-------PHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ +N +I GGV YD+ ++ + + +
Sbjct: 397 AQTAGTYPELADLLQR-------AIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|344924665|ref|ZP_08778126.1| DNA mismatch repair protein [Candidatus Odyssella thessalonicensis
L13]
Length = 885
Score = 120 bits (300), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 196/424 (46%), Gaps = 76/424 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHC 380
LS Q+ E K ++ D ++FF++G FYELF DA AK LD+ K EQ P C
Sbjct: 29 LSPVMTQYLEMKKEYGDALLFFRLGDFYELFFEDAVTAAKALDIVLTKRGKNEEQPIPMC 88
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +L +KG++V + EQ E P + K++G+K +KR++ VVT GT+
Sbjct: 89 GVPVHAYESYLARLIQKGFKVAICEQLEDPSE----AKKRGAKGP-LKRDVVRVVTPGTI 143
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
TE +L A +++LMA+ S T + GI +D++T ++ + D + L
Sbjct: 144 TEESMLEAR-QSNFLMAV--------SPLTSQQLGIACIDLSTGAFLV----EATDMANL 190
Query: 501 CCLLSELRPVEIIKPANM-LSPETERAILRHTR--NPLVNDLVPLSEFWDAETTVLEIKN 557
+L+ L P EII P + + P A+ + R +PL PL+ F D E L ++
Sbjct: 191 PGVLARLNPAEIIMPDRLIMEPSLYEALNQWKRKLSPL-----PLARF-DYENGKLRLET 244
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y T ++ G+ + A G + Y++
Sbjct: 245 AYQVKTLDAF------------------------------GNFCPAEIRAAGTLIDYIQV 274
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ K L + + M +D P +LE+ ++SG G+L ++
Sbjct: 275 T---------QKAALRLIDRPRQIKPQSIMTIDTPTRRSLEL-HLTQSGQRQGSLMDTID 324
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF-RKALSRLPDMERL 736
VT+ G RLL LA PL +I+ERQD V+ V+ P ++ R L + PDMER
Sbjct: 325 RTVTSAGSRLLSLQLAAPLLQLDMIQERQDNVSYF--VDHPDVRQYLRGTLKQAPDMERA 382
Query: 737 LARL 740
L+RL
Sbjct: 383 LSRL 386
>gi|315651393|ref|ZP_07904418.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
gi|315486352|gb|EFU76709.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
Length = 880
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 211/459 (45%), Gaps = 83/459 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
LS ++ E K+++ D ++F+++G FYE+F DA + AKEL+L +K P C
Sbjct: 3 LSPMMSKYLETKNEYPDCILFYRLGDFYEMFFDDATMVAKELELTLTGKDCGLKERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L + G++V + EQ E P + KG +VKRE+ +VT GT+
Sbjct: 63 GVPYHAAETYINRLVQNGHKVAIAEQMEDP------KLAKG----LVKREVVRIVTPGTI 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T +L A+ +Y++++ D FG+ + D++T + +++ + L
Sbjct: 113 TSSGVL-ADDKNNYIISIF---------YIDERFGLSICDISTGDFFVTELITSRE---L 159
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+ + +P EII + E L + + PL + E + ++I
Sbjct: 160 FDEIQKYQPTEIICNH---AFEISGISLEELKKKYNITITPLDNSYFGEKSGIDIL---- 212
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
K V++ +A G LSE + A G L YL +
Sbjct: 213 --------KKHFKVSSVEALG---------LSEF-------TYATIASGAMLRYLYE--- 245
Query: 621 DETLLRFAKFELLPCSGF--GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+ + + +++ S + GD YM++D + NLE+ E R +G+L L+
Sbjct: 246 ---MQKSSCAQIVSISAYKNGD-----YMIVDTSSRRNLELVETMREKKKNGSLLGVLDK 297
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERL 736
TA G R+LR++L +PL N I RQ+AVA L R +++ E R+ LS + D+ERL
Sbjct: 298 TSTAMGARMLRSFLEQPLINRERILNRQEAVAELFERYIDRE---ELREYLSPVYDLERL 354
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC 775
+AR+ + AN R+ +L A+ K + L+ C
Sbjct: 355 MARV-VTKNANTRD----LLSLSASMKMIAPIKEVLNNC 388
>gi|419718740|ref|ZP_14246046.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum
F0468]
gi|383305080|gb|EIC96459.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum
F0468]
Length = 880
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 211/459 (45%), Gaps = 83/459 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
LS ++ E K+++ D ++F+++G FYE+F DA + AKEL+L +K P C
Sbjct: 3 LSPMMSKYLETKNEYPDCILFYRLGDFYEMFFDDATMVAKELELTLTGKDCGLKERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L + G++V + EQ E P + KG +VKRE+ +VT GT+
Sbjct: 63 GVPYHAAETYINRLVQNGHKVAIAEQMEDP------KLAKG----LVKREVVRIVTPGTI 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T +L A+ +Y++++ D FG+ + D++T + +++ + L
Sbjct: 113 TSSGVL-ADDKNNYIISIF---------YIDERFGLSICDISTGDFFVTEIITSRE---L 159
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+ + +P EII + E L + + PL + E + ++I
Sbjct: 160 FDEIQKYQPTEIICNH---AFEISGISLEELKKKYNITITPLDNSYFGEKSGIDIL---- 212
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
K V++ +A G LSE + A G L YL +
Sbjct: 213 --------KKHFKVSSVEALG---------LSEF-------TDATVASGAMLRYLYE--- 245
Query: 621 DETLLRFAKFELLPCSGF--GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
+ + + +++ S + GD YM++D + NLE+ E R +G+L L+
Sbjct: 246 ---MQKSSCAQIVSISAYKNGD-----YMIVDTSSRRNLELVETMREKKKNGSLLGVLDK 297
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERL 736
TA G R+LR++L +PL N I RQ+AVA L R +++ E R+ L+ + D+ERL
Sbjct: 298 TSTAMGARMLRSFLEQPLINRERILNRQEAVAELFERYIDRE---ELREYLNPVYDLERL 354
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGC 775
+AR+ + AN R+ +L A+ K + L+ C
Sbjct: 355 MARV-VTKNANTRD----LLSLSASMKMIAPIKEVLNNC 388
>gi|443644971|ref|ZP_21128821.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
B64]
gi|443284988|gb|ELS43993.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
B64]
Length = 859
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 251/636 (39%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLQ--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA----------PHL 393
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 394 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|313893371|ref|ZP_07826943.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 158
str. F0412]
gi|313442012|gb|EFR60432.1| DNA mismatch repair protein MutS [Veillonella sp. oral taxon 158
str. F0412]
Length = 877
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 186/424 (43%), Gaps = 91/424 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + K+++ D+++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKARYPDELLFFRLGDFYELFNDDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT+
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVVKVITPGTV----- 114
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFG-------ICVVDVATSRIILGQVMDDLDCS 498
+TE+ S + F + DV+T +I ++ + S
Sbjct: 115 ------------MTENGNDARSNNFLSLFYMVKDAWILVFSDVSTGEVIWHRITNCDKRS 162
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ LS RP EII P P+ + + + + +V L P S ++
Sbjct: 163 DMYDALSMYRPSEIILPEGTTLPQDIKDFIENQFSNVV--LSPFSTYYT----------- 209
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
R AE KA ++ + G++ E V ALG L YL++
Sbjct: 210 -QREVAE---KAVNHFGD-----------LGLMEE---------DVWEALGYMLLYLEE- 244
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K E+ + ++ ++LD +L +LE+ N R G GTL L+
Sbjct: 245 --------IIKSEISHINYVHQLSVGNRLILDTSSLRHLEIIHNLRDGGQKGTLLDVLDR 296
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERL 736
+T G RLL+ WL PL + I+ RQ AVA L RG + R L + D ER+
Sbjct: 297 TLTPMGARLLKQWLESPLTDVNQIQRRQAAVAELITRGAERS---HMRSLLDCIYDFERI 353
Query: 737 LARL 740
+ R+
Sbjct: 354 VGRV 357
>gi|353327816|ref|ZP_08970143.1| DNA mismatch repair protein MutS [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 836
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 202/453 (44%), Gaps = 81/453 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ K+++ D ++F+++G FYELF DA AK L++ K E P CG P
Sbjct: 13 EQYLNLKAQYTDHLLFYRLGDFYELFFDDAIKAAKLLNIVLTKRGNSNGQEIPMCGVPAH 72
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL G++V + +Q ET ++ K++G K +VKR++ VVT GT+ E L
Sbjct: 73 SSESYLHKLIDLGFKVAICDQLETADE----AKKRGYKS-IVKRDVVRVVTPGTIIEDSL 127
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII-LGQVMDDLDCSVLCCLL 504
L + +YL ++ E N + I ++++T + + + LD +L
Sbjct: 128 LEDKSN-NYLASIVEQNDE---------YAISWLELSTGKFFHILTSLKALDSDLL---- 173
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P E++ E R+IL++ + + E+ + T+ E I
Sbjct: 174 -RISPRELLISEKFTEDEKIRSILKNYKISITQHAQSFFEYSKSHRTLCEFYKI------ 226
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
EL S G+ + A G L Y
Sbjct: 227 ---------------------------RELGSIGNFSKVEIMACGALLEY---------- 249
Query: 625 LRFAKFELLPCSGFGDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+R + +P F K+ +M++DA A NLE+F +++ G+ G+L + ++H VTA
Sbjct: 250 VRVTQRGSIPRLEFPKTYKQQNFMLIDASARRNLELF-STQFGEKKGSLISVIDHTVTAS 308
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ LA PL S I R ++P + R+ LS +PD+ER L+RL
Sbjct: 309 GGRLLKQMLASPLACSKAINLRLSTAQFFVNNHEP-RRKIREILSNIPDIERSLSRLIL- 366
Query: 744 SEANGRNSNK-VVLYEDAAKK--QLQEFISALH 773
GR S K + L + K +L EF+S LH
Sbjct: 367 ----GRGSPKDMNLLKIGLGKTLELSEFLSTLH 395
>gi|88798289|ref|ZP_01113875.1| DNA mismatch repair protein [Reinekea blandensis MED297]
gi|88779065|gb|EAR10254.1| DNA mismatch repair protein [Reinekea sp. MED297]
Length = 862
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 164/639 (25%), Positives = 269/639 (42%), Gaps = 129/639 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K +H D ++F++MG FYELF DA + AK LD+ K Q P G P
Sbjct: 16 QQYLKIKKQHPDDLVFYRMGDFYELFFDDAKLAAKLLDITLTKRGQSGGQPIPMAGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L ++G V + EQ P KG V+R++ V+T GTL+
Sbjct: 76 AAENYIARLVQQGQTVAICEQIGDPA------TSKGP----VERQVVRVLTPGTLS---- 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
D +YL ES + + + I V+DVA+ R + Q +
Sbjct: 122 -----DEAYLQDRQESLLAALFNHAE-TWAIAVLDVASGRFNVLQTPTQEEA-------- 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA- 564
L +E +KP +L E + T+ L W A+ L ++ +A
Sbjct: 168 -LNELERLKPREILYAEDQ------TQYEL-----SYQATWRAQPVWL-----FDLDSAV 210
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E LN G G+ L ++ L A G L Y +++
Sbjct: 211 EQLNH---QFGTKSLSGFGVETL--------------TEALRAAGCLLNYARET------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ EL + ++LD+ NLE+ N R G+ S TL+A ++HC TA G
Sbjct: 248 ---QRGELPHVNAIAPELTSDSVILDSATRRNLEIDINVR-GEESHTLFALMDHCSTAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFAS 743
R LR WL RPL + +R+RQ AVA L F E F++ L + D+ER+LAR+
Sbjct: 304 SRRLRRWLNRPLRDQDQLRQRQAAVAILL---DDFRFEQFQQHLKPIGDIERVLARVALR 360
Query: 744 SEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
S R + + L E AA+ LQ S L C+ + +L + L N + + L + +
Sbjct: 361 S---ARPRDLIRLREALAAQTDLQ---SLLETCD--NNVLQTLRSQL-NVDPKWLDELRS 411
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLK 861
+ P +V I GGV + YD +++ ++++ L
Sbjct: 412 AIRDNPPVV---------------------IREGGVIAEGYDHELDELRGLDSNAADFLA 450
Query: 862 EQRKLLGD-TSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK- 916
E + T ++ + +G + Y +E+ ++ P +Y R + K R+ TP +K
Sbjct: 451 EMETTERNRTGLSSLKVGYNRVHGYYIEISKAQAADAPVEYTRRQTLKNAERFITPELKT 510
Query: 917 ---KLLGELSQAESEKESALKSILQRL------IGQFCE 946
K L S+A + ++ ++Q+L + QFCE
Sbjct: 511 FEDKALSARSRALAREKHLYDELVQKLAENLPGLQQFCE 549
>gi|67458875|ref|YP_246499.1| DNA mismatch repair protein MutS [Rickettsia felis URRWXCal2]
gi|75536684|sp|Q4UM86.1|MUTS_RICFE RecName: Full=DNA mismatch repair protein MutS
gi|67004408|gb|AAY61334.1| DNA mismatch repair protein MutS [Rickettsia felis URRWXCal2]
Length = 886
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 187/427 (43%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALTES-NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L + N+ AS +C VD++TS I + V + + +
Sbjct: 135 LI-ASAEPNYLASLVITKNKETAS--------LCYVDLSTSEIFVVNVPE----AEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + A+G L YL +
Sbjct: 220 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSILEYL-------S 261
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G G+L LNH VT
Sbjct: 262 LTQKQNIPHLPIPRIINF--HSYMTIDFATRRNLEIVTNSQ-GTLKGSLLNTLNHTVTKQ 318
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N R+ L + D+ER L R+
Sbjct: 319 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKRIRELLKKTSDIERCLTRI-TM 376
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 377 NRSSGRD 383
>gi|424066568|ref|ZP_17804032.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|408002167|gb|EKG42430.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 846
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 251/636 (39%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 3 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 63 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 113 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 159
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 160 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 205
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 206 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 239
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 240 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 288
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 289 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 344
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 345 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA----------PHL 380
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 381 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 436
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 437 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 494
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 495 ELKEFEDKALSAKSRALAREKMLYETLLEDLIGHLA 530
>gi|425897835|ref|ZP_18874426.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892101|gb|EJL08579.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 859
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 155/635 (24%), Positives = 261/635 (41%), Gaps = 130/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLKVLQARQTSIGCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ ++AL L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALAAL----------PELQVAMTELEAEHLSQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + ++L+ K D N +I GGV YD+ +++ + + +
Sbjct: 397 AVTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKAFEDKALSAKSRALAREKMLYEALLETLIGHL 542
>gi|392595671|gb|EIW84994.1| DNA mismatch repair protein MSH3 [Coniophora puteana RWD-64-598
SS2]
Length = 1071
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 152/674 (22%), Positives = 283/674 (41%), Gaps = 114/674 (16%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSM 389
+KQ + ++ D V+ ++G + E A + E+ F F
Sbjct: 221 SEKQVLKLIKENPDTVLMIEIGYKFYFHENSAKLIHAEI-------------FSLHRFQS 267
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
E L +G++V +VEQ ET +K +++++ R++ + T T + EL S +
Sbjct: 268 IGETLLSQGHKVGIVEQVETAAL----KKVSDTRNELFDRKLTHLYTATTFVD-ELESVD 322
Query: 450 PDAS-----YLMALTESNQSPASQSTDRCFGICVVDV--ATSRIILGQVMDDLDCSVLCC 502
DAS L+ L E ++ P D I ++ + +T ++ + D L L
Sbjct: 323 -DASKHYAPSLLCLAEKSRQPG---VDDTVTISLITICPSTGDVVWDEFDDSLMRIELET 378
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L+ RP E++ P +S T + + T V + F + ++ N ++ +
Sbjct: 379 RLTHTRPAELLFPDKGMSKPTGKLLKHFTETAPFQQRVRVERFKE----LMSYTNAFDLV 434
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELIST-GDSGSQVLSALGGTLFYLKKSFLD 621
T + N + A+ EL++ D QV+ AL + +L K +
Sbjct: 435 TNFYSEETKRNSTDVNAD------------ELLAVIADFPPQVIIALAHAIKHLSKFSIA 482
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ L AKF F + +M+L++ L NLE++ N G+L L+ T
Sbjct: 483 DAFLG-AKF-------FYKFTTRMHMLLNSNTLTNLEIYRNETDLSVKGSLMEILDRTNT 534
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL- 740
FG RLL+TW+ RPL + +R+R DAV + + R+ L ++PD+ + L R+
Sbjct: 535 KFGARLLKTWVGRPLVDKIALRDRMDAVDEIVKSPSDKLVSIRQVLRKMPDLAKGLCRIQ 594
Query: 741 FASSEANG-----RNSNKV-VLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
+ + R NKV +++ +++ +EF S L
Sbjct: 595 YGTCTPQEMAVLLRTFNKVATMFDHLPEEENKEFDSKL---------------------- 632
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK------- 847
L I+++L KD+ + + A + + G D + K
Sbjct: 633 ------------LNDILTVLPKLKDSTNVLLAAVNMKAAGQGKKDEMWADQDKFPALYEN 680
Query: 848 --KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
++ +E+ L LK RKLL S+ + ++ + +L+E+ +S + VP ++ + S K
Sbjct: 681 KLMIQTVESELADELKSIRKLLKKPSLEWTSVSGEEFLVEIRKSDKTEVPANWTIVSRTK 740
Query: 906 GFFRYWTPNIKKLLGELSQ----AESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
F RY +P +++ + E ++ E+E A KS L+ +I +H++ R V A +
Sbjct: 741 VFTRYHSPEVRRKIQERARYRETLEAEAHKAFKSFLEEIIQ---DHYSILRHTVNTLATI 797
Query: 962 TLILLDGSLLHAFL 975
++ SL H L
Sbjct: 798 DCLV---SLSHVAL 808
>gi|398902856|ref|ZP_10651310.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM50]
gi|398177949|gb|EJM65610.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM50]
Length = 859
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 152/632 (24%), Positives = 257/632 (40%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQSSITCL--LDGYRFEKLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L A HI+
Sbjct: 358 -------------IGLRNARPRDLARLRDALGALPELQVAMAELEA----------PHII 394
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
L A S + +N +I GGV YDS +++ + + + L
Sbjct: 395 Q----LAATTSTYPELAALLEKAIIDNPPAVIRDGGVLKTGYDSELDELQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|302187931|ref|ZP_07264604.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. syringae
642]
Length = 855
Score = 119 bits (299), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 251/636 (39%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 72 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 169 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 215 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 248
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 249 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 297
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 298 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 353
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 354 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA----------PHL 389
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 390 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELHDLQSLSENAGQF 445
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 446 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 503
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 504 ELKEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 539
>gi|422664943|ref|ZP_16724816.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330975362|gb|EGH75428.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 859
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 251/636 (39%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA----------PHL 393
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 394 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|359490375|ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 176/702 (25%), Positives = 296/702 (42%), Gaps = 100/702 (14%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q + K K+ D ++ ++G Y F DA + A+ L + ++ P ++
Sbjct: 117 EQQVVDLKQKYPDVLLMVEVGYRYRFFGEDAEIAARVLGIYAHVDHNFLTASIPTFRLNV 176
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVVTKGTLTEGELLSA 448
+V +L G++V VV+QTET K GS K R + A+ TK TL E +
Sbjct: 177 HVRRLVSAGFKVGVVKQTETAAI-----KAHGSNKLGPFCRGLSALYTKATLEAAEEVGG 231
Query: 449 NPDA-----SYLMALTE-------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
+ +YL+ + E S D GI V+V+T ++ G+ D+
Sbjct: 232 GEEECGSYNNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVAVEVSTGDVVHGEFNDNFM 291
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE---FWDAETTVL 553
+ L ++ + P E++ LS +TE+ +L + P N V + F D +
Sbjct: 292 RAGLEAVILSMSPAELLL-GYPLSKQTEKLLLAYA-GPASNVRVERTSRDCFSDG-GALA 348
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
E+ ++Y ++ S +AD V N++ CL + ++S D Q AL T+
Sbjct: 349 EVMSLYENLSENS--RADHQVDNTEVMEQENHCLA--IEGIMSMPDLAVQ---ALALTIR 401
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
+LK+ L+ L A F + M L A AL+ LEV N G SG+L
Sbjct: 402 HLKQFGLERILCMGASFR--------PFSSNMEMTLSANALQQLEVLNNHSDGSESGSLL 453
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA-------------GLRGVN---- 716
+NH +T FG RLLR W++ PL +S +I R DAV+ G++
Sbjct: 454 HTMNHTLTIFGSRLLRHWVSHPLCDSNMISARLDAVSEIVMSMGSCKASQNFGGIDEGDS 513
Query: 717 -----QP----FALEFRKALSRLPDMERLLARLF--ASSEANGRNSNKVVLYEDAAKKQL 765
QP L R PD++R L R+F ++ + + + +L+ A KQL
Sbjct: 514 DVTYVQPEVNYLLSSVLTTLGRSPDIQRGLTRIFHRTATASEFISVTQAILF---AGKQL 570
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVS-ILKHFKDAFDWV 824
Q LH E D + E +SR + +L L A S I+ + +
Sbjct: 571 QR----LH-IEEKD--------VDEKGQSRSVRSVLLRKLILTASSSGIIGNAAKLLSTL 617
Query: 825 --EANNSGRI----IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIG 878
EA + G + I G + A V+ + L + RK L ++ ++++
Sbjct: 618 NKEAADKGDLPNLFIISSGQFPEVAKARSLVQSAKEKLDLLIGLYRKQLRMNNLEFMSVS 677
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
+L+E+P ++ VP ++ +S K RY P + L +LS A E A +
Sbjct: 678 GTTHLIELPVDVK--VPSNWVKVNSTKKTVRYHPPEVLSALDQLSLANEELMIACRGAWD 735
Query: 939 RLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSN 980
+ F ++ ++++ V A A L LH+ IL N
Sbjct: 736 SFLRAFDKYFSEFQAAVQALATL-------DCLHSLAILSRN 770
>gi|293400026|ref|ZP_06644172.1| DNA mismatch repair protein MutS [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306426|gb|EFE47669.1| DNA mismatch repair protein MutS [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 843
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 94/433 (21%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPER 385
Q+ E K KH D++IF+++G FYE+F DA + ++ELDL + G+ P CG P
Sbjct: 13 QYLELKEKHKDEIIFYRLGDFYEMFFDDAKIASQELDL-VLTGKNAGVEERVPMCGIPHH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +++L +KGY+V +VEQ E P + +VKR+I +VT GT+ +
Sbjct: 72 AANGYIQRLIQKGYKVAIVEQMENP----------ATAKGLVKRDILKIVTPGTIMDE-- 119
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDV-ATSRIILGQVMDDLDCSVLCCLL 504
++ Y+++L D FG+ VV T+ + Q++D ++ LL
Sbjct: 120 VNDEKATVYIVSL-----------HDYQFGLAVVLCEMTTGEMRAQLIDKQVMAIQKVLL 168
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
EI+ + + ++ I++ + D + +S + DA IK Y +
Sbjct: 169 GN-NVAEIV-----IEEKFDKKIVKMIEDM---DRITISYYQDA-----AIKEAYEHLI- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
S E D + GIL+ ++LDET
Sbjct: 214 ------------SDIEDDRIRHAFGILT-------------------------NYLDETQ 236
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
R + + + + ++ +D +NLE+ + R+ S TL++ L+ C ++ G
Sbjct: 237 RR----NMAHLNHVEQVYENEFLQMDYNTKQNLELTASIRNNSKSLTLWSFLDKCRSSMG 292
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFA 742
RLL+ W+ PL ++ +I +R DA+ L N F E ++ LS + DMERL AR+ A
Sbjct: 293 SRLLKKWIEYPLVDTKMINKRLDAIEYL---NDNFITKDELKEHLSFVYDMERLSARV-A 348
Query: 743 SSEANGRNSNKVV 755
AN R+ +++
Sbjct: 349 YGSANPRDILRLI 361
>gi|440720446|ref|ZP_20900864.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP34876]
gi|440726574|ref|ZP_20906827.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP34881]
gi|440365971|gb|ELQ03058.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP34876]
gi|440366156|gb|ELQ03241.1| DNA mismatch repair protein MutS [Pseudomonas syringae BRIP34881]
Length = 859
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 152/636 (23%), Positives = 251/636 (39%), Gaps = 130/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H+D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHLDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y K++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLTILQARQTSITCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A H+
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPELQQAMTDLDA----------PHL 393
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ L S D +N +I GGV YD+ ++ + + +
Sbjct: 394 ----QQLAQTASTYPELADLLQRAIIDNPPAVIRDGGVLKTGYDAELDDLQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R LG+ + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLGNLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKEFEDKALSAKSRALAREKMLYETLLEDLIGHLA 543
>gi|94496583|ref|ZP_01303159.1| DNA mismatch repair protein MutS [Sphingomonas sp. SKA58]
gi|94423943|gb|EAT08968.1| DNA mismatch repair protein MutS [Sphingomonas sp. SKA58]
Length = 914
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 189/435 (43%), Gaps = 96/435 (22%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ-----PHCGFPERN 386
Q+ K++ D ++F++MG F+ELF DA + A LD+ +G+ P CG P +
Sbjct: 45 QYLALKAQAQDCLLFYRMGDFFELFFDDAKLAAATLDIALTSRGDHEGAPTPMCGVPVHS 104
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L + G+RV + EQTETP Q K +GSK +V R+I VT GTLTE LL
Sbjct: 105 AESYLARLIKGGHRVAIAEQTETPAQ----AKARGSK-ALVARDIVRYVTAGTLTEETLL 159
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV--LCCLL 504
A D + L+AL + + + GI D++T R + L C + L L
Sbjct: 160 DARRD-NMLVALAQVGGETSGE-----VGIAAADISTGR------FETLTCPIVDLPAEL 207
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ LRP E TVL + A
Sbjct: 208 ARLRPSE---------------------------------------TVLADGATMDVPGA 228
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
+ ++A + + +QA L L G+ + L G G L+A+GG + YL + +
Sbjct: 229 IAFDRAAFSSSRAQA---ALKRLFGV-ATLDGFGQFGRAELAAMGGLVAYLDHA--GKGT 282
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
L F + SG ++ +DA E+LE+ + +G +G+L A ++ VT G
Sbjct: 283 LPFLAPPMRKASG-------AHIAIDAATRESLEIVATT-AGTRAGSLLAAIDRTVTGAG 334
Query: 685 KRLLRTWLARPLYNSGLIRERQDAV------AGLRGVNQPFALEFRKALSRLPDMERLLA 738
RLL ++ PL + I R V AGLR + R AL LPD+ R L
Sbjct: 335 ARLLAQDISAPLMDLSAIEARLGLVQMFHDDAGLRD-------QVRGALRALPDIGRALG 387
Query: 739 RLFASSEANGRNSNK 753
R+ A GR S +
Sbjct: 388 RV-----AVGRGSPR 397
>gi|291534090|emb|CBL07203.1| DNA mismatch repair protein MutS [Megamonas hypermegale ART12/1]
Length = 810
Score = 119 bits (298), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 186/433 (42%), Gaps = 85/433 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-----PHCGFPERN 386
+Q+ K+ H D+++FF++G FYE+F DA + +KEL+L K P CG P
Sbjct: 3 QQYQTVKNAHPDQILFFRLGDFYEMFLDDAILVSKELELTLTKRSTAGDGIPMCGVPYHA 62
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ KL KGY+V + EQ P K KG + KRE+ ++T GT+ L
Sbjct: 63 AESYINKLVNKGYKVAICEQIGDP-------KAKG----LTKREVIKIITPGTVMNESAL 111
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD-CSVLCCLLS 505
+++ + +Y+ + E N + D G C + D D C +L L
Sbjct: 112 TSSKN-NYIALIYEENHAIYLAGADISTGECFY----------SIYDGPDRCQLLFDELY 160
Query: 506 ELRPVE--IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L E +IKP + E + + N LVN+L ++ E +L+ +++NR
Sbjct: 161 RLMMPELLLIKPFSY-ERELKNFLSLRLNNCLVNELTEITS--QIEDLMLQHFDMHNR-- 215
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
D+ +A+ + L L E + T L+ L K ++LD +
Sbjct: 216 ------PDNKIAHK-----AIATLLEYLHETVKTD------LTHLN------KLTYLDSS 252
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+ +D L NLE+ N R G TLY L+ TA
Sbjct: 253 ---------------------KSLFIDTYTLRNLEITRNLRDGGKKDTLYDVLDFTKTAM 291
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE--FRKALSRLPDMERLLARLF 741
G RLLR WL PL + I +R DAVA L F+L R+ L + D ERLL R+
Sbjct: 292 GSRLLRKWLEYPLLSPKKINDRLDAVANLVS---DFSLRNNLREQLKEIYDFERLLTRME 348
Query: 742 ASSEANGRNSNKV 754
+ AN R+ N +
Sbjct: 349 VGT-ANARDMNAL 360
>gi|68171124|ref|ZP_00544533.1| MutS 1 protein [Ehrlichia chaffeensis str. Sapulpa]
gi|67999449|gb|EAM86089.1| MutS 1 protein [Ehrlichia chaffeensis str. Sapulpa]
Length = 795
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 149/626 (23%), Positives = 269/626 (42%), Gaps = 113/626 (18%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPERNFSM 389
+Q+ KS++ + ++F+++G FYELF DA ++ L++ K G P CG P +
Sbjct: 11 MQQYMMLKSQYKEYLLFYRLGDFYELFFDDAIETSRILNIVLTKKGNVPMCGVPFHSSES 70
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ +L + GY++ + EQ ET E+ K++G K +VKR++ +VT GT+ E LL A
Sbjct: 71 YLNRLVKLGYKIAICEQLETSEE----AKKRGYK-ALVKRDVVRIVTPGTILEDSLLEAK 125
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCLLSELR 508
E+N + D + I ++++T + LD L +
Sbjct: 126 ----------ENNYLSCIVNVDHNYAIAWLELSTGLFYYHTTELHKLDSD-----LFRIN 170
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
P E++ ++ ++ +ILR + + F+D + + N+Y
Sbjct: 171 PKEVLISDKLVELDSIYSILRKYKFSVTQ---YSGSFFDVSRSYNTLCNVY--------- 218
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK---KSFLDETLL 625
G++ L G+ GD ++ ++ G L Y+K K L + L
Sbjct: 219 --------------GISTLKGL-------GDLKNEEIAVCGSLLEYVKATQKGNLPQ--L 255
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F K +K +M +DA AL NLE+F ++SGD G+L + +++ +TA G
Sbjct: 256 EFPK----------AYSKGDFMFIDAAALRNLELF-CTQSGDLEGSLISSIDYTITACGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ L+ PL S I R D V ++ R+ L + D+ER+L R+
Sbjct: 305 RLLKRCLSAPLACSHAINRRLDIVEFFVN-DRTLCRGVRETLRGIADIERILTRI----- 358
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAILENTESRQLHHILTP 803
G+ S K + ++ + LH + ++ CS LG N + L +L P
Sbjct: 359 KVGKCSPKDLYALKLTLDKIFVLLDLLHKFDSSVVGDFCSRLGK--YNDLCKTLDDVLIP 416
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA---SLTKHL 860
NN + G ++ DYD+ + I++ L + L
Sbjct: 417 -----------------------NNVNNVKDGGFINPDYDAQLSEYIYIQSYSNDLIQEL 453
Query: 861 KEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ + + + + L Y +EV S S +D+ R + RY T +K L
Sbjct: 454 RDKYRNITNIQSLKILYNNILGYYVEVSSSYLIS-DKDFIHRQTLANSIRYTTSELKAL- 511
Query: 920 GELSQAESEKESALKSILQRLIGQFC 945
S+ S +++A+ ++ ++ GQ C
Sbjct: 512 --ESKIISARDAAI-NLEVKIFGQLC 534
>gi|448476283|ref|ZP_21603447.1| DNA mismatch repair protein MutS [Halorubrum aidingense JCM 13560]
gi|445815832|gb|EMA65751.1| DNA mismatch repair protein MutS [Halorubrum aidingense JCM 13560]
Length = 946
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 200/488 (40%), Gaps = 97/488 (19%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQPHCGFPERNF 387
++ + K++ V+ + G FYE F DA + A ELDL + P G P
Sbjct: 8 EFLDLKAETDADVLAMQCGDFYEFFADDAELVADELDLTVSQKSSHGSSYPMAGVPLTEL 67
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ V+ L +GYRV V +Q ET + REI VVT GTL E +
Sbjct: 68 TPYVKALVERGYRVAVADQYETADGH--------------AREITRVVTPGTLLE----T 109
Query: 448 ANPDASYLMALTE-----------SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
A+ DA YL A+ + ++ S +G+ + DV T R ++ +V D
Sbjct: 110 ADDDARYLAAIVRDGGRAGGTTGAAGEAAGSDDAGGPYGLALADVTTGRFLVTEVDD--- 166
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET-----T 551
S L L P E++ + + + A+L R L L +DAE
Sbjct: 167 TSDLRAELYRFDPAEVLPGPRVRNDD---ALLGAVREDLSGSL----SVFDAEAFAPGRA 219
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
++ + R TA+S+ GI S+L L A G
Sbjct: 220 SHAVREQFGRETADSV---------------------GIDSDL---------ALRAAGAV 249
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L Y++++ A L G GD ++ LDA NLE+ R GD G+
Sbjct: 250 LGYVEETGAGV----LASMTRLTAYGDGD-----HVELDATTQRNLELTATMR-GDRDGS 299
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRL 730
L+ L+H V+A G RLLR WL RP + G + +R DAV L + A + R+ L
Sbjct: 300 LFETLDHTVSAAGGRLLREWLTRPRRDRGTLDQRLDAVEAL--ASAALARDRLRETLGDA 357
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL AR +G + +L + + A+ G L D +++ L+
Sbjct: 358 YDLERLAART-----TSGSAGARELLSVRDTLALVPAMVDAVEGTALADSPVAAVLRDLD 412
Query: 791 NTESRQLH 798
+R+LH
Sbjct: 413 RDRARELH 420
>gi|195978976|ref|YP_002124220.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195975681|gb|ACG63207.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 837
Score = 119 bits (298), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 161/645 (24%), Positives = 262/645 (40%), Gaps = 125/645 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K + D + F+MG FYELF DA A+ L++ + P G P
Sbjct: 2 QQYLDIKKNYPDAFLLFRMGDFYELFYEDAVKAAQILEIGLTSRNKNADNPIPMAGVPYH 61
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++ L G++V + EQ E P+Q VVKRE+ V+T GT +
Sbjct: 62 SVQQYIDVLIDLGHKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTAVD--- 108
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S+ PD+ +N A + +G+ +DV+T D D + + +
Sbjct: 109 -SSRPDSP-------NNFLVAVDFDGKAYGLSYMDVSTGEFF---ATDLADFASVKSEIQ 157
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L+ E++ + E E+AIL N L++ E T LE
Sbjct: 158 NLKAKEVLLGFEL--SEEEQAILVKQMNLLLS----------FEMTALE----------- 194
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
DS + + Q LT + LSA G L Y+ +T L
Sbjct: 195 -----DSPLIDHQ-----LTAVE----------------LSAAGKLLHYVH-----QTQL 223
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
R EL K Y+ + +L++ EN+R+G G+LY L+ TA G
Sbjct: 224 R----ELSHLQALVHYDIKDYLQMSYATKSSLDLLENARTGKKHGSLYWLLDETKTAMGM 279
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDMERLLAR 739
RLLRTW+ RPL S I ERQ+ + Q F F + +L + D+ERL +R
Sbjct: 280 RLLRTWIDRPLVTSEAILERQEII-------QVFLNAFIERTDLSDSLKGVYDIERLSSR 332
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+ + G+ + K +L QL ++ + AILE S L
Sbjct: 333 V-----SFGKANPKDLL-------QLGHTLA----------KVPYIKAILEAFNSPYLDK 370
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
++ LP + +++ D D N G II G D D K ++E +
Sbjct: 371 LVNQIDTLPELEHLIRSAIDP-DAPATINEGNII-RTGFDERLDHYRKVMREGTGWIADI 428
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
++R+ G +++ KD Y V S G VP + +++ K RY T + K+
Sbjct: 429 EAKERQASGISNLKIDYNKKDGYYFHVTNSNLGMVPDHFFRKATLKNSERYGTAELAKIE 488
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
G++ +A E S I R+ Q + ++ +Q+ A A + ++
Sbjct: 489 GQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLAKALATVDVL 533
>gi|238019355|ref|ZP_04599781.1| hypothetical protein VEIDISOL_01219 [Veillonella dispar ATCC 17748]
gi|237864054|gb|EEP65344.1| hypothetical protein VEIDISOL_01219 [Veillonella dispar ATCC 17748]
Length = 877
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 187/420 (44%), Gaps = 83/420 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA + ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNDDALIASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-- 442
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT +TE
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVITPGTVMTENG 119
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ S N A + M + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLALFYMV-------------KDAWILVFSDVSTGEVIWHRITDCEKRSDMFD 166
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
LS RP EII P + P+ + + + + +V L P S + R
Sbjct: 167 ALSMYRPSEIILPEGTVLPQDIKDFMDNQFSNIV--LSPFSTYHT------------QRE 212
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
AE KA ++ + G++ E V ALG L YL+
Sbjct: 213 VAE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED----- 244
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ----IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTP 300
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AVA L RG + R L + D ER++ R+
Sbjct: 301 MGARLLKQWLESPLTDVNQIQRRQAAVAELITRGAERS---HIRSLLDCIYDFERIVGRV 357
>gi|85111307|ref|XP_963874.1| hypothetical protein NCU08115 [Neurospora crassa OR74A]
gi|74662732|sp|Q7SD11.1|MSH3_NEUCR RecName: Full=DNA mismatch repair protein msh-3; AltName: Full=MutS
protein homolog 3
gi|28925619|gb|EAA34638.1| hypothetical protein NCU08115 [Neurospora crassa OR74A]
Length = 1145
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 162/682 (23%), Positives = 266/682 (39%), Gaps = 119/682 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ E K KHMD ++ ++G + F DA + A+EL + + G E P
Sbjct: 192 QFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAHLDRFA 251
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L GY+V VV Q ET +K +++ R++ V TKG
Sbjct: 252 SASIPVHRLPVHAKRLVAAGYKVGVVRQIETAAL----KKAGDNRNAPFVRKLTNVYTKG 307
Query: 439 TLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
T + GEL + YL+ LTE+ GI V AT II +
Sbjct: 308 TYIDETGELDQPGETTGASSGGYLLCLTETPAKGMGTDEKVNVGIIAVQPATGDIIYDEF 367
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN--------DLVPLS 543
D + L + P E + + LS T++ +++H N + VP S
Sbjct: 368 EDGFMRREIETRLLHISPCEFLIVGD-LSKATDK-LIQHLSGSSTNVFGDKSRVERVPKS 425
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+ AE+ Y+ +T KA + S A + + LP
Sbjct: 426 KTMAAES--------YSNVTDFYAGKAKDSDERSAALLNKVLKLP-------------EA 464
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
V+ L + +L + L + + K+ F + + +M+++ LE+LEV+ N+
Sbjct: 465 VMICLSAMITHLTEYGL-QHIFDLTKY-------FQSFSTRQHMLINGTTLESLEVYRNA 516
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
G+L L+ T FG+RLLR W+ RPL + + ER AV L +N +
Sbjct: 517 TDHSEKGSLLWALDKTHTRFGQRLLRKWIGRPLLDQQRLEERVSAVEEL--LNNQSTAKV 574
Query: 724 RKALSRL----PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
K ++ L D+ER L R++ K E +S L + +
Sbjct: 575 DKLVNMLKSIKADLERSLIRIY------------------YGKCTRPELLSTLQTLQKIS 616
Query: 780 QACSSLGAILENTESRQL--HHILTPGKGLPAIVSIL---------KHFKDAFDWVEANN 828
+ + + + S L I+T P + + L K K AF ++E +
Sbjct: 617 FEYARVKSPADTGFSSTLLTSAIMTLPSISPMVTAHLSKINAEAARKDDKYAF-FLEQHE 675
Query: 829 SGRIIPH----GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYL 883
+ I H V+ D D +H E K LG + YVT+ YL
Sbjct: 676 TEDISEHKLGIAAVEQDLD--------------EHRSEAAKDLGKKVPVNYVTVAGIEYL 721
Query: 884 LEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQ 943
+EVP + VP + S K R+ TP + +L+ E Q + SA L+ Q
Sbjct: 722 IEVPNTDLKRVPASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFSDLLSQ 781
Query: 944 FCEHHNKWRQMVAATAGLTLIL 965
+ R V++ + L +L
Sbjct: 782 IAGEYQPLRDAVSSLSTLDCLL 803
>gi|294793674|ref|ZP_06758811.1| DNA mismatch repair protein MutS [Veillonella sp. 3_1_44]
gi|294455244|gb|EFG23616.1| DNA mismatch repair protein MutS [Veillonella sp. 3_1_44]
Length = 877
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 188/419 (44%), Gaps = 81/419 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNEDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ VVT GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVVTPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N S + ++ + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLSLFYMVKDT------------WILVFSDVSTGEVIWHRITDCEKRSDMYDA 167
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ + + + + +V P S ++ R
Sbjct: 168 LSMYRPSEIILPEGTILPQDIQDFIENQFSNVV--FSPFSTYYT------------QREV 213
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
AE KA ++ + G++ E V ALG L YL+
Sbjct: 214 AE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED------ 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ---IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AV+ L RG + R L + D ER++ R+
Sbjct: 302 GARLLKQWLESPLTDINQIQRRQAAVSELITRGAERS---HIRNFLDCIYDFERIVGRV 357
>gi|402698770|ref|ZP_10846749.1| DNA mismatch repair protein MutS [Pseudomonas fragi A22]
Length = 859
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 153/634 (24%), Positives = 265/634 (41%), Gaps = 128/634 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RINPVELMIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE+ + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLEL-DTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
+ G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 SMGSRLLTRWLNRPLRDLPVLLARQSSITCL--LDGYRFEKLQPQLKEIGDLERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL EL D + E+ L +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGALP--ELQDA--------MIGLEAPHLQQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
T P + ++L+ + +N +I GGV YD+ +++ + + + L
Sbjct: 398 TSTGTYPELAALLEKAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL 450
Query: 861 ------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
++ R L + + Y + Y +E+P P DY R + KG R+ TP
Sbjct: 451 IDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPE 508
Query: 915 IK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LIG+
Sbjct: 509 LKAFEDKALSAKSRALAREKMLYEALLETLIGEL 542
>gi|149059006|gb|EDM10013.1| rCG44545 [Rattus norvegicus]
Length = 839
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 242/573 (42%), Gaps = 88/573 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDVKQLHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + FGI V AT ++ D
Sbjct: 308 LDDSVNIDEAVTDTSTNYLLCIYEEKENIKDKKKGNISFGIVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS-------EFWDA 548
L + L+PVE++ P+ + P TE I R T + +D + + E+ A
Sbjct: 368 SRLELETRTASLQPVELLLPSQLSEP-TEMLIRRATAVSVGDDRIRVERMNNTHFEYSHA 426
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
TV+E Y R T ++ G L G++ V+ AL
Sbjct: 427 FQTVMEF---YARETVDT---------------QGSQSLSGVI-------HLEKPVICAL 461
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ YLK+ LD+ L + F+ L SG +M ++ L NLE+ +N +
Sbjct: 462 AAIIRYLKEFNLDKVLSKPENFKQL-SSGM------EFMRINGTTLRNLEILQNQTDMKT 514
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
G+L L+H T+FG+R L+ W+ +PL I R DA++ + + L
Sbjct: 515 RGSLLWVLDHTKTSFGRRKLKKWVTQPLLKLRDINARLDAISDVLHSESSVFEQIENLLR 574
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGA 787
+LPD+ER L ++ K QEF + C+L + + + A
Sbjct: 575 KLPDVERGLCSIYHK------------------KCSTQEFFLIVKNLCQLKSELQALMPA 616
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ + +S L + +P ++S ++ + + A + + D+ K
Sbjct: 617 VNSHVQSDLLRARVLE---VPELLSPVEPYLKVLNEQAAKAGDKTELFKDLS-DFPLIKK 672
Query: 848 K---VKEIEASLTKHLKEQRKLLGDTSITYVTI 877
+ ++E+ S+ HL+E RK+L S+ YVT+
Sbjct: 673 RKNEIQEVIHSIQMHLQELRKILKLPSLQYVTV 705
>gi|416999073|ref|ZP_11939742.1| DNA mismatch repair protein MutS [Veillonella parvula
ACS-068-V-Sch12]
gi|333977226|gb|EGL78085.1| DNA mismatch repair protein MutS [Veillonella parvula
ACS-068-V-Sch12]
Length = 877
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 188/419 (44%), Gaps = 81/419 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNEDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ VVT GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVVTPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N S + ++ + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLSLFYMVKDT------------WILVFSDVSTGEVIWHRITDCEKRSDMYDA 167
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ + + + + +V P S ++ R
Sbjct: 168 LSMYRPSEIILPEGTILPQDIQDFIENQFSNVV--FSPFSTYYT------------QREV 213
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
AE KA ++ + G++ E V ALG L YL+
Sbjct: 214 AE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED------ 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ---IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AV+ L RG + R L + D ER++ R+
Sbjct: 302 GARLLKQWLESPLTDINQIQRRQAAVSELITRGAERS---HIRNFLDCIYDFERIVGRV 357
>gi|58616997|ref|YP_196196.1| DNA mismatch repair protein MutS [Ehrlichia ruminantium str.
Gardel]
gi|75507513|sp|Q5FHE8.1|MUTS_EHRRG RecName: Full=DNA mismatch repair protein MutS
gi|58416609|emb|CAI27722.1| DNA mismatch repair protein MutS [Ehrlichia ruminantium str.
Gardel]
Length = 804
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 186/412 (45%), Gaps = 66/412 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPERNFSM 389
+Q+ K ++ + ++F+++G FYELF DA +K L++ K G P CG P +
Sbjct: 11 MQQYVTLKQQYKEYLLFYRLGDFYELFFDDAIKTSKILNIVLTKKGNVPMCGVPFHSSET 70
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ KL + GY++ + EQ ET E+ +++G K +VKR++ +VT GT+ E LL A
Sbjct: 71 YLNKLVKLGYKIAICEQLETSEE----ARKRGYKS-LVKRDVVRIVTPGTIVEDSLLEA- 124
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+++YL + S A + G+ + + LD +L + P
Sbjct: 125 KESNYLACIVRIKDSCAIAWLELSTGLFCYHMTH--------ISKLDSDLL-----RIGP 171
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ ++L E +I++ R + S F+D + N+Y
Sbjct: 172 KELLVADDLLEIEAVYSIIKKYRFSITQ---YSSSFFDENRAYNTLCNVY---------- 218
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
G++ L G+ GD +S G L Y+ + +
Sbjct: 219 -------------GVSTLKGL-------GDLKGVEISVCGSLLEYVIAT----------Q 248
Query: 630 FELLPCSGF-GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
LP GF + +M +DA AL NLE+F +++SG+ G+L A ++ VTA G RLL
Sbjct: 249 KGSLPKLGFPKAYVQSDFMFIDAAALRNLELF-STQSGELEGSLIASIDFTVTASGGRLL 307
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
+ L+ PL ++ I R AV NQ R+ L + D+ER+L R+
Sbjct: 308 KRCLSAPLASADAINRRLSAVEFFVN-NQNLYKSVRQVLRGIADIERILTRV 358
>gi|212536476|ref|XP_002148394.1| DNA mismatch repair protein Msh3 [Talaromyces marneffei ATCC 18224]
gi|210070793|gb|EEA24883.1| DNA mismatch repair protein Msh3 [Talaromyces marneffei ATCC 18224]
Length = 1116
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 160/666 (24%), Positives = 271/666 (40%), Gaps = 78/666 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ +KQ + K KHMD ++ ++G + F DA AKEL + + G E P
Sbjct: 204 LTPMEKQVIDIKRKHMDTLLVVEVGYKFRFFGEDARTAAKELSIVCIPGKMRFDEHPSEA 263
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L G++V VV Q ET + +++ R++
Sbjct: 264 HLDRFASASIPVHRLHVHVKRLVTAGHKVGVVRQLETAAL----KAAGDNRNAPFVRKLT 319
Query: 433 AVVTKGT-LTEGELLSANPDA--------SYLMALTESNQSPASQSTDRCFGICVVDVAT 483
V TKGT + + E LS A YL+ +TESN S + + GI V AT
Sbjct: 320 NVYTKGTYIDDAEGLSTPAAASAGATPATGYLLCITESNTSGSDERVH--VGIVAVQPAT 377
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVP 541
II + D + L + P EI+ L+ T++ + L ++ + D V
Sbjct: 378 GDIIYDEFEDGFMRGEIETRLLHIAPCEILIVGE-LTKATDKLVKHLSGSKMNVFGDKVR 436
Query: 542 LSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSG 601
+ ++T E + + A+ L D A DG +L +++ D
Sbjct: 437 VERVARSKTAAAEGHSRVSSFYAQKLKSTD-------AGDDGKAS--ALLEKVLQLPD-- 485
Query: 602 SQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFE 661
QV L + +L + L E + K+ F + + +M+L+ L +LE+++
Sbjct: 486 -QVTVCLASMIDHLSEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTSLEIYQ 536
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
N S G+L+ ++ T FG+RLLR W+ RPL + + ER DAV L Q
Sbjct: 537 NQTDYSSKGSLFWTMDRTRTRFGQRLLRKWVGRPLLDKRQLEERVDAVEELLNSEQNQLT 596
Query: 722 E-FRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
E + LS++ D+ER L R++ Y + +L + L
Sbjct: 597 EKLKDLLSKVRSDLERSLIRIY---------------YGKCTRPELLTVLQTLQMIANTF 641
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
S G ES + + LP I + F + + A N + +
Sbjct: 642 VHIKSAGDT--GFESTMISEAIA---ALPMIQEDVVMFLEKINMHAAKNDDKYEFFRESE 696
Query: 840 MDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP--ESLRGSVP 895
D +K + +E L +HL ++LG + YVT YL+EV + VP
Sbjct: 697 ESDDITEQKLGIASVEHDLEQHLSVAAEVLGKKKVDYVTSAGIEYLIEVDNNSAQFKRVP 756
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ S K R+ TP++ +L+ + Q + +A RL+G+ + +R +
Sbjct: 757 ASWAKISGTKKLSRFHTPDVVQLIRQRDQHKEALAAACDKAYIRLLGEISTRYQSFRDCI 816
Query: 956 AATAGL 961
+ A L
Sbjct: 817 QSLALL 822
>gi|294791813|ref|ZP_06756961.1| DNA mismatch repair protein MutS [Veillonella sp. 6_1_27]
gi|294457043|gb|EFG25405.1| DNA mismatch repair protein MutS [Veillonella sp. 6_1_27]
Length = 877
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 188/419 (44%), Gaps = 81/419 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNEDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTE-G 443
+E L +KGY+V + EQ E P+ + KG +VKR++ VVT GT +TE G
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVVTPGTVMTENG 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+N S + ++ + + DV+T +I ++ D S +
Sbjct: 120 NDARSNNFLSLFYMVKDT------------WILVFSDVSTGEVIWHRITDCEKRSDMYDA 167
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
LS RP EII P + P+ + + + + +V P S ++ R
Sbjct: 168 LSMYRPSEIILPEGTILPQDIQDFIENQFSNVV--FSPFSTYYT------------QREV 213
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
AE KA ++ + G++ E V ALG L YL+
Sbjct: 214 AE---KAVTHFGD-----------LGLMEE---------DVWEALGYMLLYLED------ 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K E+ + ++ ++LD +L +LE+ N R G GTL L+ +T
Sbjct: 245 ---IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDRTLTPM 301
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARL 740
G RLL+ WL PL + I+ RQ AV+ L RG + R L + D ER++ R+
Sbjct: 302 GARLLKQWLESPLTDINQIQRRQAAVSELITRGAERS---HIRNFLDCIYDFERIVGRV 357
>gi|452980203|gb|EME79964.1| hypothetical protein MYCFIDRAFT_204401 [Pseudocercospora fijiensis
CIRAD86]
Length = 1143
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 155/666 (23%), Positives = 263/666 (39%), Gaps = 88/666 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH------ 379
+++ E K KH D ++ ++G Y LF DA V AK L + + G E P
Sbjct: 244 EQRIVELKRKHSDALLVVEVGYKYRLFGEDARVAAKVLSVVCIPGKFRFDEHPSEAHMTK 303
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
FP ++V++L G++V +V Q ET + +K K+ +R++ + T
Sbjct: 304 FASASFPTHRLHVHVKRLINAGHKVGIVRQLETAAL----KAAGANKSKLFERDLTNLYT 359
Query: 437 KGTLTEGE--------LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIIL 488
K T + E P + YL+ LTES G+ V AT II
Sbjct: 360 KATYVDDEEGLGAPSGAAGGAPASGYLLCLTESYPKGVGSDEKVQIGLIAVQPATGDIIY 419
Query: 489 GQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA 548
D S L L + P E + LS T++ + H + D L
Sbjct: 420 DDFEDGWMRSELETRLLHISPAEFLVIGE-LSKATDKLV--HYLSG--GDDARLERKPKP 474
Query: 549 ETTVLEIKNIYNRITAESLNK---ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
+T E + + A+ + + S V +SQ +G +L ++ ++ + L
Sbjct: 475 KTMAAESYSHITKFYADKMKTDGPSSSQVESSQGKGT-------LLDKVHRLSENATICL 527
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
SA+ + +L L F+L C F + + +M+L+ L +LE++ N
Sbjct: 528 SAM---ITHLTDYGLQHV------FDLTKC--FQSFSARSHMLLNGNTLSSLEIYRNQTD 576
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFR 724
G+L+ L+ T FG+RLLR W+ RPL N + ER AV LR G+
Sbjct: 577 QAERGSLFWTLDRTQTKFGRRLLRKWVGRPLLNRARLDERVAAVEELREGMGTAGVARIS 636
Query: 725 KALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
+ LS+ D+ER L R++ Y+ A+ +L F+ L + +
Sbjct: 637 QLLSKTKADLERTLIRIY---------------YKRCARPELLAFLQNLQA--IAQEYVH 679
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV--------EANNSGRIIPH 835
A ES L+ AI S+ + D D++ + N+
Sbjct: 680 VQTAADAGFESAMLNE---------AISSLPRISDDVLDYLGRMNLEAAKKNDKYNFFRD 730
Query: 836 GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVP 895
D + +E L +L ++YVT+ + YL+E+ + +VP
Sbjct: 731 EHETEDITDHKVGIVAVEHDLDDFKTTAANILKRKQVSYVTVAEIDYLIELENTQLNNVP 790
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ SS K R+ P + KLL E Q + +A + L+ + + +R+ +
Sbjct: 791 ATWTKISSTKKLSRFHPPEVVKLLRERDQHKESLSNACDTAFHSLLSEIGMKYTHFRECI 850
Query: 956 AATAGL 961
+ A L
Sbjct: 851 QSLALL 856
>gi|83589961|ref|YP_429970.1| DNA mismatch repair protein MutS [Moorella thermoacetica ATCC
39073]
gi|123524598|sp|Q2RJG2.1|MUTS_MOOTA RecName: Full=DNA mismatch repair protein MutS
gi|83572875|gb|ABC19427.1| DNA mismatch repair protein MutS [Moorella thermoacetica ATCC
39073]
Length = 863
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 186/436 (42%), Gaps = 90/436 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM----KGEQPHCGF 382
L+ Q+ + KS++ D ++FF++G FYE+F DA V A+ELDL K P CG
Sbjct: 7 LTPMMAQYRQIKSQYPDCILFFRLGDFYEMFYEDAEVAARELDLVLTTRGGKEAAPMCGV 66
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
P + +L KGY+V + EQ E P R+ KG +V+RE+ VVT GT+T+
Sbjct: 67 PFHAADSYLARLVGKGYKVAICEQMEDP------RQAKG----LVRREVIRVVTPGTITD 116
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ L+ + +YL A+ N C+G+ D +T + D L
Sbjct: 117 EKALTPGGN-NYLAAIVRYNG---------CWGLAWADASTGEFLFTTCPDQ---ETLVD 163
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L L P E + P + +T + + IY R
Sbjct: 164 ELVRLMPSEYLLPGELAR----------------------------DTALKRLLQIYTRG 195
Query: 563 TAESLNKADSNVANSQAEGD--GLTCLPGILSEL-ISTGDSGSQVLSALGGT----LFYL 615
A + A Q+ D G L G+ EL + G + + +LS L T L +L
Sbjct: 196 VITGWQVASNPEAARQSLEDHFGHEALAGV--ELPAAAGLAAAMILSFLVATQHNSLAHL 253
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ T R F D A + NLE+ R G+L
Sbjct: 254 EAPAAAATTSRM----------FLDQATR----------RNLELVTAGREQKREGSLLWV 293
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDM 733
L+ +TA G R LR WL +PL ++G I+ERQ+AVA L + F L E R+ L + D+
Sbjct: 294 LDKTLTAMGARTLRRWLDQPLVDAGAIKERQEAVAEL---VEGFILRQELRERLQVVRDL 350
Query: 734 ERLLARLFASSEANGR 749
ERL R+ A A GR
Sbjct: 351 ERLAGRV-AYGTAGGR 365
>gi|419496255|ref|ZP_14035969.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47461]
gi|133950344|gb|ABO44019.1| MutS [Streptococcus pneumoniae]
gi|379591755|gb|EHZ56575.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47461]
Length = 844
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 149/656 (22%), Positives = 272/656 (41%), Gaps = 146/656 (22%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ FG+ +D+ T V LD +
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGSQ---------FGLAYMDLVTGDFY---VTGLLDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + E L+ DS +A+ + +A L Y+ ++
Sbjct: 197 YEKEGFEDLHLLDSRLASVEQ--------------------------AASSKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L +
Sbjct: 280 DETKTAMGMRLLRSWIHRPLIDKERIIQRQEVV-------QVFLDHFFERSDLTDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL +S + + AILE
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKV 849
E L +++ G+P + S++ A + +I GG + +D K
Sbjct: 371 GMEQPALAYLIAQLDGIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDKY 423
Query: 850 KEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ + T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 424 RRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLK 483
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
R+ T + ++ G++ +A + + I R+ +G++ + Q +A
Sbjct: 484 NSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATV 539
>gi|322390457|ref|ZP_08063977.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
903]
gi|321142856|gb|EFX38314.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
903]
Length = 849
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 157/657 (23%), Positives = 272/657 (41%), Gaps = 133/657 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S +G+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------YGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYAL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + N Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDNVQLLGDHLSEL-----EKKTAGKLLQYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENGRTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A + ++
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVL 542
>gi|39933589|ref|NP_945865.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris
CGA009]
gi|48428291|sp|P61670.1|MUTS_RHOPA RecName: Full=DNA mismatch repair protein MutS
gi|39647435|emb|CAE25956.1| DNA mismatch repair protein mutS [Rhodopseudomonas palustris
CGA009]
Length = 907
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 186/422 (44%), Gaps = 71/422 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHC 380
+S +Q+ E K+ + ++F++MG FYELF DA + ++ L + +++ + P C
Sbjct: 23 MSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHLGADIPMC 82
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L G+RV V EQTE P R+ VV+R++ ++T GTL
Sbjct: 83 GVPVERSDDYLHRLIALGHRVAVCEQTEDPAAARARK-------SVVRRDVVRLITPGTL 135
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV- 499
TE LL A + +YL+A+ + S DR G+ +D++T + + CS
Sbjct: 136 TEDTLLDARAN-NYLLAIARAR---GSAGADR-IGLAWIDISTGEFCVTE------CSTA 184
Query: 500 -LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L L+ + P E I P + L +TE A P + +L ++ +++
Sbjct: 185 ELAATLARINPNEAIVP-DALYSDTELA-------PTLRELAAVTPL---------TRDV 227
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
++ TAE VA DGL LS L +T A + Y+ ++
Sbjct: 228 FDSATAERRLCDYFAVATM----DGLAA----LSRLEAT---------AAAACVTYVDRT 270
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
L + P S A M +D NLE + +G+ G+L ++
Sbjct: 271 QLGKR---------PPLSPPAREATGSTMAIDPATRANLE-LTRTLAGERRGSLLDAIDC 320
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
VTA G RLL LA PL ++ I R DAV V+ + R +L PDM R LA
Sbjct: 321 TVTAAGSRLLAQRLAAPLTDAATIARRLDAVEAF-AVDSGLREQIRSSLRAAPDMARALA 379
Query: 739 RL 740
RL
Sbjct: 380 RL 381
>gi|335045167|ref|ZP_08538190.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 108
str. F0425]
gi|333758953|gb|EGL36510.1| DNA mismatch repair protein MutS [Oribacterium sp. oral taxon 108
str. F0425]
Length = 907
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 190/438 (43%), Gaps = 88/438 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
LS +Q+ + K ++ D ++F+++G FYE+F DA +KELDL ++ P C
Sbjct: 6 LSPMMRQYLDSKKEYPDALLFYRIGDFYEMFFDDALTASKELDLVLTGKDCGLEERAPMC 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P V KL KGY+V + EQ E P +K KG +VKREI V+T GT
Sbjct: 66 GVPYHAADSYVSKLVSKGYKVAIGEQVEDP------KKAKG----LVKREIIKVITPGTQ 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
TE L + ++LM++ + GI VD+ T V D S
Sbjct: 116 TEETALEEGKN-NFLMSIYLGEKKR---------GIVTVDITTGECYATAV----DSSKE 161
Query: 501 CC-LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE-FWDAETTVLEIKNI 558
C +S P EI+ ++ + E + + L E F+
Sbjct: 162 CLDEISRFSPKEILMNPSL---KEEEELFSQINSRFSISLTEKEERFF------------ 206
Query: 559 YNRITAESLNKADSNVA---NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
SL +AD + S G GL+ + + ALGG L YL
Sbjct: 207 -------SLTEADKLITAHFQSSIMGLGLS--------------DQADLRRALGGCLSYL 245
Query: 616 ---KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
+K+ L T +R ++ K YM++D+ + NLE++E R GTL
Sbjct: 246 YDTQKNLL--THIRKIEY----------FQNKDYMIVDSYSQRNLELWETLREKKKRGTL 293
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
L++ TA G R+LR +L RPL + I R DAV G E R+ L + D
Sbjct: 294 LWVLDYTKTAMGSRMLRHFLERPLRDKKKIEARLDAVEEFNGHYIDME-ELREYLDSIYD 352
Query: 733 MERLLARLFASSEANGRN 750
+ERLL+R+ S+ AN R+
Sbjct: 353 IERLLSRISLST-ANARD 369
>gi|429862191|gb|ELA36849.1| DNA mismatch repair protein msh3 [Colletotrichum gloeosporioides
Nara gc5]
Length = 906
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 156/678 (23%), Positives = 272/678 (40%), Gaps = 96/678 (14%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-----QYMKGEQPH 379
+ L+ + Q+ E K KH+D V+ ++G + F DA + AKEL + +Y E P
Sbjct: 194 KKLTPMEIQFLEIKRKHLDTVLIVEVGYKFRFFGEDARIAAKELSIVCIPGKYRYDEHPS 253
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++ ++L G++V VV Q ET +K +++ R+
Sbjct: 254 EAHWDRFASASIPVHRLHVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRK 309
Query: 431 ICAVVTKGTLTE--GELLSAN---PDASYLMALTESNQSPASQSTDRCF--GICVVDVAT 483
+ V TKGT + GEL + + P YL+ +TE+ Q TD GI V T
Sbjct: 310 LTNVYTKGTYIDENGELETGDGGAPSGGYLLCITETPSK--GQGTDEKVDVGIVAVQPTT 367
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN------ 537
II D S + L + P E + ++ + ++RH N
Sbjct: 368 GDIIYDTFEDGFMRSEIETRLLHISPCEFVIVGDLTKGSDK--LIRHLSGSSTNVFGDRS 425
Query: 538 --DLVPLSEFWDAETTVLEIKNIYNRIT---AESLNKADSNVANSQAEGDGLTCLPGILS 592
+ VP S+ AE Y+ +T AE L + A++ +L
Sbjct: 426 RVERVPRSKTMAAEA--------YSHVTQFYAEKLQQTPDAAASA------------LLD 465
Query: 593 ELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
++ + + LSA+ + +LK+ L+ F+L F + + +M+L+
Sbjct: 466 RILHLPEPVTICLSAM---ISHLKEYGLEHV------FDL--TKNFASFSARQHMLLNGT 514
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
LE+LEV+ N+ G+L+ L+ T FG+RLLR W+ RPL + + R AV L
Sbjct: 515 TLESLEVYRNATDHSERGSLFWALDKTTTRFGQRLLRKWVGRPLLDVSRLEARVAAVQEL 574
Query: 713 RGVNQPFALEFRKAL--SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS 770
++ ++L S D+ER L R++ K E +S
Sbjct: 575 LDEQSSTKVDRLESLLSSIKTDLERSLIRIY------------------YGKCTRPELLS 616
Query: 771 ALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSG 830
L + + S++ + E + L I + LP I+ ++ + + A
Sbjct: 617 VLQTLQRIAMQYSTVKSAEETGFTSPL--ISSAIFSLPQILDLVVSHLEKINPEAARKDD 674
Query: 831 R--IIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLLEVP 887
+ D + + +E SL +H E + + YVT+ +L+EV
Sbjct: 675 KYNFFRESEQTEDIEDHKMGIVSVEQSLDEHRAEAASSIKRKKPVEYVTVSGIEFLIEVL 734
Query: 888 ESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
+ SVP + S K R+ TP + +L+ E Q +A + L+ + +
Sbjct: 735 NTDLKSVPASWIKISGTKKLSRFHTPTVVRLIQERDQHREALAAACDAAFTSLLREIADA 794
Query: 948 HNKWRQMVAATAGLTLIL 965
+ R V++ A L +L
Sbjct: 795 YQPLRDAVSSLATLDCLL 812
>gi|312866817|ref|ZP_07727030.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0405]
gi|311097600|gb|EFQ55831.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0405]
Length = 849
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 156/657 (23%), Positives = 273/657 (41%), Gaps = 133/657 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S +G+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------YGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDQLSEL-----EKKTAGKLLQYVYQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A + ++
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVL 542
>gi|408397888|gb|EKJ77025.1| hypothetical protein FPSE_02669 [Fusarium pseudograminearum CS3096]
Length = 1105
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 161/673 (23%), Positives = 274/673 (40%), Gaps = 101/673 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ E K KHMD V+ ++G + F DA + AKEL + + G E P
Sbjct: 208 QFLEIKRKHMDTVLIVEVGYKFRFFGEDARIAAKELSIVCIPGKMRYDEHPSEAHIDRFA 267
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L G++V VV Q ET +K +++ R++ + TKG
Sbjct: 268 SASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNTPFVRKLTNLYTKG 323
Query: 439 TLTE--GEL----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
T + GEL S P YL+ +TES + GI V AT II
Sbjct: 324 TYIDENGELDQSGGSGAPSGGYLLCITESKAKGSGTDEKVDVGIIAVQPATGDIIYDHFE 383
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN--------DLVPLSE 544
D S + L + P E + + L+ T++ +++H N + VP +
Sbjct: 384 DGFMRSEIETRLLHISPCEFLIVGD-LTKGTDK-LVQHLSGSSTNVFGDRSRVERVPKEK 441
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
AE Y+ +T +K N + A +L++++ + +
Sbjct: 442 TMAAEA--------YSHVTQFYADKLKDNTQDESA--------AALLNKVLKLPEPVTIC 485
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
LSA+ + +L++ L E + K+ F + + +M+++ LE+LEV+ NS
Sbjct: 486 LSAM---INHLQEYGL-EHIFDLTKY-------FQSFSTRSHMLINGTTLESLEVYRNST 534
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFA-L 721
G+L+ L+ +T G+RLLR W+ RPL + L+ R +AV L + P + L
Sbjct: 535 DHSEKGSLFWALDKTLTRPGQRLLRKWVGRPLLDQELLEARLNAVEELLNKQSTAPVSQL 594
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG------- 774
E A ++ D+ER L R++ G+ + +L A +++ + S +
Sbjct: 595 ESLLANTK-TDLERSLIRIY-----YGKCTRPELLSVLQALQRVASYYSTIKAPSDAPFS 648
Query: 775 CELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH--FKDAFDWVEANNSGRI 832
L+ +A SL IL+ S L I L A K+ F+D F + +
Sbjct: 649 SPLLSEAICSLPQILDTVVS-YLERI-----NLVAARKDDKYGFFRDEFQTEDMQDHQLG 702
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
I H +E L H + + + YVT+ +L+EVP +
Sbjct: 703 IAH----------------VEHELDGHRAVAAEKIKKKMVDYVTVAGIEFLIEVPNADIK 746
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
VP + S K R+ TP + + + E Q +A + L+ + R
Sbjct: 747 HVPASWAKISGTKKLSRFHTPEVLRFITERDQHREALAAACDKAFKDLLASIASDYQPLR 806
Query: 953 QMVAATAGLTLIL 965
V+A A L +L
Sbjct: 807 DAVSALATLDCVL 819
>gi|448119263|ref|XP_004203689.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
gi|359384557|emb|CCE78092.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
Length = 1008
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 167/650 (25%), Positives = 270/650 (41%), Gaps = 123/650 (18%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ--- 377
PD R L+ +KQ+ E K+ + DK++ ++G Y+ F DA + +K L++ + GE
Sbjct: 100 PD-TRKLTPLEKQFLELKANNRDKILAIQVGYKYKFFCEDAVIASKVLNIVLVPGENNSC 158
Query: 378 -------PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
+C P+ +++ +L +G +V VV+Q ET ++ E +K + RE
Sbjct: 159 DTSSDRFAYCSIPDNRLHIHLRRLLSQGLKVGVVKQMETAS---IKSVESDNKSGLFVRE 215
Query: 431 ICAVVTKGTLTEGEL-------LSANPD----ASYLMALTESNQSPASQSTDRCFGICVV 479
+ V TK T E +S N D Y++ + ++D+ G+ V
Sbjct: 216 MTGVYTKATYLGDEDPPRNQNDISMNEDDEGVGDYIVCI---------DASDKKVGLVAV 266
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDL 539
AT II DD + L L L P EI+ ++ D
Sbjct: 267 QPATGDIIYDTFDDDSARNELETRLIFLNPSEIL---------------------IIGD- 304
Query: 540 VPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQ--AEGDGLTCLPGILSELIST 597
E + +K I IT NV N + +E D + + S+
Sbjct: 305 ---------EEIDIGLKKIVKIITKSG------NVINKKRKSESDYRSSINTFFSKSEDI 349
Query: 598 GDS-----GSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAP 652
G S +LS + L YL++ L L S F + K YM L
Sbjct: 350 GQYYLLKFASNILSCISELLDYLQEFKLSTMFLIKDNI-----SSFSNA--KKYMHLPGS 402
Query: 653 ALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL 712
L+ LEVF+NS + GTL+ L++ T GKRLL+ W+A PL LI++R DA+ L
Sbjct: 403 TLQALEVFQNSTDYSTKGTLFWLLDYTKTKMGKRLLKKWVAMPLVLRNLIQDRLDAIDDL 462
Query: 713 -RGVNQPFALEFRKALSRLP----DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQE 767
RG N F + + +L D+E+ L ++ SS N +K+ KK++
Sbjct: 463 SRGYNN-FIDSLKNKIVKLGRAGLDLEKSLIKVHYSS---SHNVSKI------DKKEIYL 512
Query: 768 FISALHGCELMDQACSSLGAILENT-ESRQLHHILTPGKGL---PAIVSILKH------- 816
+ L + ++ SS A+ +++ SR L IL L + +LK+
Sbjct: 513 LLLNLDEISSLFRSFSSQIALFKDSVNSRLLADILQDVLDLSESTVVEKLLKYITPSALD 572
Query: 817 ---FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSIT 873
F+ + N P G+ + +K+K+IE L + L R L +
Sbjct: 573 NNQFEQKVYFFNLQN----YPDEGIL----TELEKIKDIEKKLDEELDIIRVQLNRPHLN 624
Query: 874 YVTIGKDLYLLEVPES-LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
YVT KD YL+EV + +P D+ + K R+ +P + KL EL
Sbjct: 625 YVTNLKDAYLIEVRNGKMINDIPSDWIKINGTKTVSRFRSPEVTKLYKEL 674
>gi|422009815|ref|ZP_16356798.1| DNA mismatch repair protein MutS [Providencia rettgeri Dmel1]
gi|414093633|gb|EKT55305.1| DNA mismatch repair protein MutS [Providencia rettgeri Dmel1]
Length = 855
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 180/421 (42%), Gaps = 92/421 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K++H D ++F++MG FYELF DA ++ LD+ K Q P G P
Sbjct: 15 QQYLKLKAQHSDILLFYRMGDFYELFFDDAKKASQLLDISLTKRGQSAGQPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AAEGYLAKLVQMGESVAICEQIGDPA------TSKGP----VERQVVRIVTPGTITDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+ D + L A+ + Q FG +D+ + R I+ ++ D+ L L
Sbjct: 125 LNERQD-NLLAAVWQDQQG---------FGFATLDITSGRFIISEIADE---EALQAELQ 171
Query: 506 ELRPVEIIKPANMLSPETERAILRHT----RNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
RP E++ P + S A++ H R PL W+ E
Sbjct: 172 RTRPAELLYPEDFAS----MALIEHNKGLRRRPL----------WEYE------------ 205
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFL 620
L+ A + D LI G + + L A G L Y+K +
Sbjct: 206 -----LDTAKQQLGLQFGTKD-----------LIGFGVEDAHKALRAAGCLLQYVKDT-- 247
Query: 621 DETLLRFAKFELLPCSGFGDMAKK-PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ LP M K+ ++LDA NLE+ +N +G + TL A L+ C
Sbjct: 248 --------QRTSLPHIRSIVMEKQNDNVILDAATRRNLEITQN-LAGGTENTLAAILDRC 298
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G R+L+ WL PL N ++ RQ A++ L Q E + L ++ D+ER+LAR
Sbjct: 299 VTPMGSRMLKRWLHTPLRNIQILNNRQQAISAL----QECGFELQPFLRQIGDLERVLAR 354
Query: 740 L 740
L
Sbjct: 355 L 355
>gi|373453197|ref|ZP_09545093.1| DNA mismatch repair protein MutS [Eubacterium sp. 3_1_31]
gi|371964036|gb|EHO81574.1| DNA mismatch repair protein MutS [Eubacterium sp. 3_1_31]
Length = 843
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 196/433 (45%), Gaps = 94/433 (21%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PHCGFPER 385
Q+ E K KH D++IF+++G FYE+F DA + ++ELDL + G+ P CG P
Sbjct: 13 QYLELKEKHKDEIIFYRLGDFYEMFFDDAKIASQELDL-VLTGKNAGVEERVPMCGIPHH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +++L +KGY+V +VEQ E P + +VKR+I +VT GT+ +
Sbjct: 72 AANGYIQRLIQKGYKVAIVEQMENP----------ATAKGLVKRDILKIVTPGTIMDE-- 119
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDV-ATSRIILGQVMDDLDCSVLCCLL 504
++ Y+ +L D FG+ VV T+ + Q++D ++ LL
Sbjct: 120 VNDEKATVYIASL-----------HDYQFGLAVVLCEMTTGEMRAQLIDKQVMAIQKVLL 168
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
EI+ + + ++ I++ + D + +S + DA IK Y +
Sbjct: 169 GN-NVAEIV-----IEEKFDKKIVKMIEDM---DRITISYYQDA-----AIKEAYEHLI- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
S E D + GIL+ ++LDET
Sbjct: 214 ------------SDIEDDRIRHAFGILT-------------------------NYLDETQ 236
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
R + + + + ++ +D +NLE+ + R+ S TL++ L+ C ++ G
Sbjct: 237 RR----NMAHLNHVEQVYENEFLQMDYNTKQNLELTASIRNNSKSLTLWSFLDKCRSSMG 292
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARLFA 742
RLL+ W+ PL ++ +I +R DA+ L N F E ++ LS + DMERL AR+ A
Sbjct: 293 SRLLKKWIEYPLVDTKMINKRLDAIEYL---NDNFITKDELKEHLSFVYDMERLSARV-A 348
Query: 743 SSEANGRNSNKVV 755
AN R+ +++
Sbjct: 349 YGSANPRDILRLI 361
>gi|255539477|ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
Length = 1100
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 160/705 (22%), Positives = 286/705 (40%), Gaps = 90/705 (12%)
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-P 378
P + R + +KQ + K+K+ D ++ ++G Y F DA + + L + K
Sbjct: 103 PSSYPRKYTPLEKQVLDLKTKYPDVLLMIEVGYKYRFFGEDAEIAGRVLGIYAHKDHNFM 162
Query: 379 HCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P +++V +L GY+V VV+QTET + +K R + A+ TK
Sbjct: 163 TASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAI----KAHGDNKAGPFCRGLSALYTKA 218
Query: 439 TLTEGELLSANPD-----ASYLMALTE-SNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
TL E + + ++YL + + S ++ D G V+++T ++ G+
Sbjct: 219 TLEAAEDVGGREEGCCGESNYLCCVVDKSIENGVDSGFDTRIGFVAVEISTGDVVYGEFN 278
Query: 493 DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS--EFWDAET 550
D S L ++ L P E++ + LS +TE+ +L + P N V + ++
Sbjct: 279 DGFLRSGLEAVVLSLMPAELLL-GDPLSKQTEKLLLAYA-GPSSNVRVERASGHHFNDGG 336
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
+ E+ +Y + ++ + + + GI+ + + AL
Sbjct: 337 ALAEVILLYENMGEHKAEDDENQMMERTHQDISYLAIEGIM-------NMPDLAVQALAL 389
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
T+ +LK+ F E +LR + F + M L A L+ LEV N+ +G SG
Sbjct: 390 TISHLKQ-FGFEQILRLG-------ASFRPLTSNVEMNLSANTLQQLEVLRNNSNGSDSG 441
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR----------------- 713
+L+ +NH +T G RLLR W+ PL + +I R DAV+ +
Sbjct: 442 SLFNIMNHTLTISGSRLLRHWVTHPLCDRNMISARLDAVSEIAESMGSYKALQNTGDFDE 501
Query: 714 -----GVNQPFALEFRKALS-------RLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
+ QP +F LS R PD++R + R+F + A V+ A
Sbjct: 502 EDSDVAIIQP---DFYHLLSTVLEMLGRSPDIQRGITRIFHRT-ATASEFIAVIQAILIA 557
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAF 821
KQL+ QA + +L+ ILT S++ H
Sbjct: 558 GKQLRRLQIEEEQNNKRVQAKTVRSVLLKKL-------ILTVSSS-----SVVGHAAKLL 605
Query: 822 DWV--EANNSG----RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ EA G I+ G + S+ K V + L + RK L S+ ++
Sbjct: 606 STLNKEAAEHGDLTNLIVISNGQFPEVASSNKAVHLAKEKLDSLINLYRKQLKMRSLEFM 665
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
++ +L+E+P ++ VP ++ +S K RY P + L +L+ A E ++
Sbjct: 666 SVSGTTHLIELPADVK--VPLNWVKINSTKKMIRYHPPEVLTALDQLALANEELMVVCRA 723
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSN 980
+ F +H+ +++ ++ A A L LH+ IL N
Sbjct: 724 AWDSFLRSFAKHYAEFQAVIQALAAL-------DCLHSLAILSKN 761
>gi|363897251|ref|ZP_09323790.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB7]
gi|361958748|gb|EHL12045.1| DNA mismatch repair protein MutS [Oribacterium sp. ACB7]
Length = 902
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 198/464 (42%), Gaps = 93/464 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
LS +Q+ + K ++ D ++F+++G FYE+F DA ++ELDL ++ P C
Sbjct: 6 LSPMMRQYLDSKKEYPDALLFYRIGDFYEMFFDDALTASRELDLVLTGKDCGLEERAPMC 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P V KL KGY+V + EQ E P +K KG +VKREI V+T GT
Sbjct: 66 GVPYHAADSYVSKLVSKGYKVAIGEQVEDP------KKAKG----LVKREIIKVITPGTQ 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
TE L + ++L+++ + GI VD+ T V D S
Sbjct: 116 TEETALEEGKN-NFLLSIYLGEKKR---------GIVTVDITTGECYATAV----DSSKE 161
Query: 501 CC-LLSELRPVEI-IKPANMLSPETERAILRHTRNPLVNDLVPLSE-FWDAETTVLEIKN 557
C +S P EI I P S + E + + L E F+
Sbjct: 162 CLDEISRFSPKEILINP----SLKEEEELFSQINSRFSISLTEKEERFF----------- 206
Query: 558 IYNRITAESLNKADSNVA---NSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
SL +AD + S G GL+ + + ALGG L Y
Sbjct: 207 --------SLTEADKLITAHFQSSIMGLGLS--------------DQADLRRALGGCLSY 244
Query: 615 L---KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
L +K+ L +R F K YM++D+ + NLE++E R GT
Sbjct: 245 LYDTQKNLLSH--IRKIDF----------FQNKDYMIVDSYSQRNLELWETLREKKKRGT 292
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L++ TA G R+LR +L RPL + I R DAV G E R+ L +
Sbjct: 293 LLWVLDYTKTAMGSRMLRHFLERPLRDKKKIEARLDAVEEFTGHYIDME-ELREYLDSIY 351
Query: 732 DMERLLARLFASSEANGRNSNKVVL---YEDAAKKQLQEFISAL 772
D+ERLLAR+ S+ AN R+ + L Y KK L F S+L
Sbjct: 352 DIERLLARISLST-ANARDLLALKLSLQYLPDIKKALSPFQSSL 394
>gi|414157706|ref|ZP_11414002.1| DNA mismatch repair protein mutS [Streptococcus sp. F0441]
gi|410871624|gb|EKS19571.1| DNA mismatch repair protein mutS [Streptococcus sp. F0441]
Length = 844
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 149/660 (22%), Positives = 277/660 (41%), Gaps = 145/660 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+AL + NQ FG+ +D+ T + + LD
Sbjct: 116 VD----SSKPDSQNNFLVALDRDGNQ----------FGLAYMDLVTGDFYVTGL---LDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKEGFEDLHLLDSRLAAVEQ--------------------------AAASKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFFDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S + + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKK 848
E E L +++ G+P + S++ A + +I GG + +D K
Sbjct: 370 EGMEQPALAYLIEQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A + ++
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|398877437|ref|ZP_10632583.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM67]
gi|398202600|gb|EJM89441.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM67]
Length = 859
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 156/635 (24%), Positives = 262/635 (41%), Gaps = 130/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK---ALSRLPDMERLLA 738
A G RLL WL RPL + ++ RQ ++ L A F K L + D+ER+LA
Sbjct: 302 AMGSRLLTRWLNRPLRDLNVLLARQTSITCLLD-----AYRFEKLQPQLKEIGDIERILA 356
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R+ RN+ D A+ L++ + AL L + E+ +
Sbjct: 357 RI------GLRNARP----RDLAR--LRDALGAL----------PELQVAMAELEAPHII 394
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLT 857
+ P + ++L+ K D N +I GGV YDS ++ + +
Sbjct: 395 QLAKTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDDLQSLSENAG 447
Query: 858 KHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ L + + + T ++++ +G + Y +E+P S P DY R + KG R+ TP
Sbjct: 448 QFLIDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LI Q
Sbjct: 508 ELKAFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|422645682|ref|ZP_16708817.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330959231|gb|EGH59491.1| DNA mismatch repair protein MutS [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 859
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 148/634 (23%), Positives = 255/634 (40%), Gaps = 126/634 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGPVD----RQVVRIITPGTISDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGARR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ L G C ++ + + A G L Y +++
Sbjct: 219 ATQDLK--------------GFGC------------ENLTLAIGAAGCLLSYARETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + D A + NLE+ + + SG TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDTVILDAASR----------RNLEL-DTNLSGGRDNTLQSVMDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ + + E + L + D+ER+LAR
Sbjct: 302 AMGTRLLTRWLNRPLRDLAVLQARQTSIGCFL---ERYRFENLQPQLKEIGDIERILAR- 357
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ +A + L AL + QA + L A L +
Sbjct: 358 --------------IGLRNARPRDLARLRDALSALPALQQAMTDLDA-------PHLQQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + +L+ + +N +I GGV YD+ +++ + + +
Sbjct: 397 AQTASTYPELADLLQRAIN-------DNPPAVIRDGGVLKTGYDAELDELQSLSENAGQF 449
Query: 860 LKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + + + T ++++ +G + Y +E+P P DY R + KG R+ TP +
Sbjct: 450 LIDLEAREKARTGLSHLKVGYNRVHGYFIELPSKQAEQAPADYIRRQTLKGAERFITPEL 509
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQFC 945
K K L S+A + ++ +++L+ LIG
Sbjct: 510 KEFEDKALSAKSRALAREKMLYEALLEDLIGHLA 543
>gi|192288943|ref|YP_001989548.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris TIE-1]
gi|192282692|gb|ACE99072.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris TIE-1]
Length = 907
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 208/483 (43%), Gaps = 81/483 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHC 380
+S +Q+ E K+ + ++F++MG FYELF DA + ++ L + +++ + P C
Sbjct: 23 MSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHLGADIPMC 82
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L G+RV V EQTE P R+ VV+R++ ++T GTL
Sbjct: 83 GVPVERSDDYLHRLIALGHRVAVCEQTEDPAAARARK-------SVVRRDVVRLITPGTL 135
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV- 499
TE LL A + +YL+A+ + S DR G+ +D++T + + C+
Sbjct: 136 TEDTLLDARAN-NYLLAIARAR---GSAGADR-IGLAWIDISTGEFCVTE------CTTA 184
Query: 500 -LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L L+ + P E I P + L +TE A P + +L ++ +++
Sbjct: 185 ELAATLARINPNEAIVP-DALYSDTELA-------PTLRELAAVTPL---------TRDV 227
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
++ TAE VA DGL LS L +T A + Y+ ++
Sbjct: 228 FDSATAERRLCDYFAVATM----DGLAA----LSRLEAT---------AAAACVTYVDRT 270
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
L + P S A M +D NLE + +G+ G+L ++
Sbjct: 271 QLGKR---------PPLSPPSREAAGTTMAIDPATRANLE-LTRTLAGERRGSLLDAIDC 320
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
VTA G RLL LA PL ++ I R DAV G + + R +L PDM R LA
Sbjct: 321 TVTAAGSRLLAQRLAAPLTDAAAIARRLDAVEAFTG-DAGLREQIRSSLRAAPDMARALA 379
Query: 739 RL---------FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQA-CSSLGAI 788
RL A+ R +++V+ QE SA+ + +A C+ LG
Sbjct: 380 RLSLGRGGPRDLANLRDGIRAADEVIAQLGQLASPPQEIASAMAALQRPSRALCAELGRA 439
Query: 789 LEN 791
L +
Sbjct: 440 LAD 442
>gi|156835926|ref|XP_001642215.1| hypothetical protein Kpol_183p2 [Vanderwaltozyma polyspora DSM
70294]
gi|190359850|sp|A7TTQ1.1|MSH3_VANPO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|156112674|gb|EDO14357.1| hypothetical protein Kpol_183p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 1023
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 156/631 (24%), Positives = 265/631 (41%), Gaps = 120/631 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---------------E 376
+Q + K HMDK++ ++G Y+ F DA + +K L + + G +
Sbjct: 140 QQVKDLKLLHMDKILVIRVGYKYKCFAQDAEIVSKILHIMLIPGKLTIDESNPQDSNYRQ 199
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
+C FP+ +++E L +V VVEQ+ET + SK+ V +R+I V T
Sbjct: 200 FAYCSFPDIRLKVHLETLVHNNLKVAVVEQSETSAIK--KNSNASSKNSVFERKISGVYT 257
Query: 437 KGTLTEGELLSAN-------PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
K T S+N ++ +++ +E ++ +S F + V++ + II
Sbjct: 258 KATFGINSAFSSNRKNVLGQYNSIWIINFSEIDKINSS------FFMISVNLNSGEII-- 309
Query: 490 QVMDDLDCSV-----LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
D +CS L + L P+E++ + + PE + L + N + L E
Sbjct: 310 --YDTFECSTTSIENLETRIKYLNPIEVLTVSAL--PEKVKLRLHGS-----NSTILLKE 360
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
D + ++E +NK+ + G + S
Sbjct: 361 KEDIDKEIME-----------EINKS-------------------------TKGLNLSAE 384
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
L L L+ + +E LL L + A K +MVL+A A+E+L +F
Sbjct: 385 LFELVPVLYKYLTEYNNEELL-------LISENYKPFASKKHMVLNAAAIESLGIF--GE 435
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV-AGLRGVNQPFALEF 723
G G+L+ L+H T+FG R LR W+ PL + I +R DAV + V+ F
Sbjct: 436 EG-GKGSLFWLLDHTRTSFGSRKLREWILHPLLDKKEIEDRLDAVDCIIHEVSNIFFESL 494
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS--ALHGCELMDQA 781
K L+ +PD+ R + R+ A G S K + Y KQ++ F LH L Q
Sbjct: 495 NKMLTNVPDLLRTINRI-----AYGTTSRKEIYY---FLKQMKSFSDHFQLHSNYLNSQV 546
Query: 782 CSSLGAILENTESRQLHHILTP-GKGLPAI-VSILKHFKDAFDWVEANNSGRIIPHGGVD 839
S+ G I + S L ++LT GL I + + + +E + ++ ++
Sbjct: 547 VSNDGRI--HKSSALLTNLLTEITSGLKEINIENILSMINVSSVMEKDTYKQVSEFFNLN 604
Query: 840 MDYDSACKKVK------EIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLLEVPESLR 891
YD A + +K E++ L + L RK+L + Y KD YL+EV +
Sbjct: 605 Y-YDHAEEIIKIQGNINEVKNELAEELSSIRKILKRPHLNY----KDEMDYLIEVRNTQT 659
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+P D+ + + K RY TP +KL+ +L
Sbjct: 660 KGLPSDWIVVNRTKMISRYHTPTSRKLIEKL 690
>gi|417846878|ref|ZP_12492862.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1073]
gi|339457998|gb|EGP70551.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1073]
Length = 844
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 149/660 (22%), Positives = 277/660 (41%), Gaps = 145/660 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ + NQ FG+ +D+ T V LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGNQ----------FGLAYMDLVTGDFY---VTGFLDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A+ + +A L Y+ +
Sbjct: 197 -YEKEGFEDLHLLDSRLASVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L QL +S + + AIL
Sbjct: 332 VYDIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKK 848
E E L +++ G+P + S++ A + +I GG + +D K
Sbjct: 370 EGMEQPALTYLIEQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A + ++
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|421618424|ref|ZP_16059400.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri KOS6]
gi|409779516|gb|EKN59172.1| DNA mismatch repair protein MutS [Pseudomonas stutzeri KOS6]
Length = 859
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 158/638 (24%), Positives = 260/638 (40%), Gaps = 134/638 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K +H D+++F++MG FYELF DA A LD+ Q P G P
Sbjct: 16 QQYWRLKREHPDQLMFYRMGDFYELFYDDAKKAAALLDITLTARGQSAGTAIPMAGIPFH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 SAEGYLARLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A ++ FG+ V+D+A+ R + ++ L L
Sbjct: 126 LDERRD----------NLLAAVVGDEKLFGLSVLDIASGRFTVQELK---GWETLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD ++R
Sbjct: 173 RLSPAELLIPDDWPQGLPLEKRRGVRR--RAP-----------WD-----------FDRD 208
Query: 563 TAESLNKADSNVANSQAEGDG---LTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+A A +G G LT G L+S + +AL L L+
Sbjct: 209 SA--FKSLCQQFATQDLKGFGCENLTLAIGAAGCLLSYAKETQR--TAL-PHLRSLRHER 263
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
LD+T+ +LD + NLE+ N SG TL + ++ C
Sbjct: 264 LDDTV-----------------------ILDGASRRNLELDVNL-SGGRENTLQSVMDRC 299
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLA 738
TA G RLL WL RPL N ++ RQD++ L + + E + L + D+ER+LA
Sbjct: 300 QTAMGSRLLTRWLNRPLRNREVLEARQDSITCLL---EYYRFEQLQPQLKDIGDLERILA 356
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
R+ RN+ D A+ L++ ++AL L A +++ + LH
Sbjct: 357 RI------GLRNARP----RDLAR--LRDALAAL----------PQLQAGMQDLVAPHLH 394
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLT 857
+ P + +L +N +I GGV YD+ +++ + +
Sbjct: 395 ELAKSISTYPELAELLAR-------AIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAG 447
Query: 858 KHL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
++L ++ R L + + Y + Y +E+P S P DY R + KG R+
Sbjct: 448 QYLMDLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAESAPADYIRRQTLKGAERFI 505
Query: 912 TPNIK----KLLGELSQAESEKESALKSILQRLIGQFC 945
TP +K K L S+A + ++ +L+ LIG
Sbjct: 506 TPELKEFEDKALSAKSRALAREKLLYDELLEMLIGHLA 543
>gi|19074680|ref|NP_586186.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTS FAMILY [Encephalitozoon
cuniculi GB-M1]
gi|19069322|emb|CAD25790.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTS FAMILY [Encephalitozoon
cuniculi GB-M1]
Length = 922
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 152/323 (47%), Gaps = 34/323 (10%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M +D L N+E+F+N+ +G TL+ ++ C T FG+RLLR W+ PL I +RQ
Sbjct: 395 MGIDDATLRNMEIFKNNYNGTDEKTLFKAVDFCSTPFGQRLLRRWMMAPLVRKEDIVKRQ 454
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
+ + ++ + + ++AL R+ D ERLL RL+ NG + K L
Sbjct: 455 EMALVFKRMD---STKLKEALGRIGDGERLLVRLY-----NG----------NPTAKDLS 496
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPA-IVSILKHFKDAFDWVE 825
+FI L C+ + LG L I+ + I +L + +D E
Sbjct: 497 KFIRCLGACK---ETFDVLGMELRTRRLEGARDIVEKAEDYSCRIEEVLVWHRKVYDVTE 553
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKE---IEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
A I P + + D C + E IE L +L+EQ+ LG SI + +GKD++
Sbjct: 554 AG----ISPG---EENEDELCHLMSEKGKIEGDLDAYLQEQKTRLGCPSIRFRDVGKDVF 606
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EVP+ + VP DY + SS KG RY++ +++KL+ + E + S+L+R I
Sbjct: 607 QMEVPKEI--GVPSDYFIMSSVKGVNRYYSRDLRKLVERYMECEERIFQSKGSLLRRAID 664
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
H +RQ+ A + L
Sbjct: 665 VLLPHVIFFRQVFCELAQIDCYL 687
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 20/199 (10%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YDP TL +P + + +KQ+W+ K D ++FFK GKFYEL+E DA VGA+ DL+
Sbjct: 121 YDPSTLLIPEHEYKKFTPFEKQFWDIKKDFFDTIVFFKKGKFYELYENDALVGARLFDLK 180
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS------KD 424
+ GFPE + K GY++ VEQ+E ++R +++ S KD
Sbjct: 181 ITDRVNMKMSGFPEGSLDYWSRKFLEHGYKIARVEQSENMIGKQIRERDEMSKEGRVVKD 240
Query: 425 KVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESNQSPASQSTDRCFG-ICVVDVA 482
K+++RE+ ++T+GT+ + + SA P YLM++ + + C+ C +V
Sbjct: 241 KIIRRELKEIITQGTIYSIDYMRSAMP--MYLMSVA---------TDEVCYSETCSGEVH 289
Query: 483 TSRIILGQVMDDLDCSVLC 501
TS ++ + ++ S C
Sbjct: 290 TSVVLYDASIGEVYFSSFC 308
>gi|418964295|ref|ZP_13516109.1| DNA mismatch repair protein MutS [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383341100|gb|EID19368.1| DNA mismatch repair protein MutS [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 855
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 157/653 (24%), Positives = 270/653 (41%), Gaps = 140/653 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 8 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMA 67
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 68 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 117
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+AL + + +G+ +DV T QV D +
Sbjct: 118 VD----SSKPDSQNNFLVALDKLSG---------IYGLAYMDVGTGEF---QVTSLSDFN 161
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + LR E++ PE ER +L + + T+L
Sbjct: 162 IVCGEIRNLRAREVVLGYEF--PEMERQVL------------------ETQMTLL----- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
L++ ++ + Q G L+ L ++ G L Y+ K+
Sbjct: 197 --------LSQVETTFDDVQLLGKDLSPLEHQVA----------------GKLLQYVHKT 232
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
L E L + +E+ K ++ +D + +L++ EN+R+G G+LY +
Sbjct: 233 QLRELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLM 281
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR W+ RPL + I +RQD V Q F F + L +
Sbjct: 282 DDTKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDTLKGV 334
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAI 788
D+ERL +R+ + G+ + K +L A + + L G + +++ + L I
Sbjct: 335 YDIERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEI 389
Query: 789 LENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK 848
E + + ++P P +++ K FD E + R++ G D +
Sbjct: 390 PE--LASLIQSAISPDA--PNVITEGNIIKTGFD--ETLDKYRVVMRDGTSWIADI---E 440
Query: 849 VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFF 908
KE EAS +LK I Y KD Y V S VP + +++ K
Sbjct: 441 AKEREASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATLKNSE 488
Query: 909 RYWTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
R+ T + ++ GE+ +A + + I R+ G++ + Q +A
Sbjct: 489 RFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATV 541
>gi|342218674|ref|ZP_08711282.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 135-E]
gi|341589370|gb|EGS32651.1| DNA mismatch repair protein MutS [Megasphaera sp. UPII 135-E]
Length = 865
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 163/669 (24%), Positives = 268/669 (40%), Gaps = 168/669 (25%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQPHC 380
L+ KQ+ E K + D+++FF++G FYE+F DA ++ELDL K + P C
Sbjct: 7 LTPMMKQYLEVKKQCQDQLLFFRLGDFYEMFFDDAITASRELDLTLTGRAGGNKEKVPMC 66
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +E+L +KGY+V + EQ E P + KG +VKR+I VVT GT+
Sbjct: 67 GVPFHSADTYIERLVQKGYKVAICEQMEDP------KMTKG----IVKRQIIKVVTPGTI 116
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV- 499
T ++A + +Y+ + + ++ +A + + G+ M + CS+
Sbjct: 117 TMEHAVAAKQN-NYIGCIMQQGN--------------MISLALAEVTTGECM-WMACSIK 160
Query: 500 -----LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
L +LS P E++ S ++ TR+ W T ++
Sbjct: 161 QMEEKLFDILSVYTPRELVIETMASSQQSRVKRFLETRD------------WSCTVTAIQ 208
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGIL---SELISTGDSGSQVLSALGGT 611
I E+L + + L C+ +L ++++ + S +L A+
Sbjct: 209 RD---ESIAYETLPVKYFSAQAVEKAKPVLACIGVLLKYIADVMKSEISHMNLLIAID-- 263
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
Y K+ LD LR +LEV +N R G GT
Sbjct: 264 --YTKQLVLDAASLR-----------------------------HLEVTQNVRDGGRKGT 292
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSR 729
L L+H TA G RLLR WL PL + G I RQD+VA L Q L + LSR
Sbjct: 293 LLEVLDHTQTAMGGRLLRKWLESPLLSIGDITYRQDSVAEL---VQKVTLRQDLVNILSR 349
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D ER+L R+ E N +V L+E ++AL ++ L
Sbjct: 350 IFDFERILTRI----EIGTVNPKDMV--------ALRESLAAL----------PAIKQYL 387
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
+SR L + T + ++L + +N G ++ +GGV
Sbjct: 388 AQAQSRMLKQLATQISVHDDMYTLLMRGIN-------DNPGTVLRNGGV----------- 429
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---------------------YLLEVPE 888
I + + L E R+L D+ TI ++L Y E+
Sbjct: 430 --IRSGFSAELDEIRRLAADSQ----TILQELEATERERTGIKMKIGYTKVFGYYFEISH 483
Query: 889 SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHH 948
+ +P Y + + RY TP++K+ ++ A+ E+ AL++ L F
Sbjct: 484 ANTKPIPDYYVRKQTLVNAERYITPDLKEFEVKVLTAQ-ERMLALETAL------FATIR 536
Query: 949 NKWRQMVAA 957
+Q +AA
Sbjct: 537 EDLQQQIAA 545
>gi|118579497|ref|YP_900747.1| DNA mismatch repair protein MutS [Pelobacter propionicus DSM 2379]
gi|189083167|sp|A1AMW9.1|MUTS_PELPD RecName: Full=DNA mismatch repair protein MutS
gi|118502207|gb|ABK98689.1| DNA mismatch repair protein MutS [Pelobacter propionicus DSM 2379]
Length = 870
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 164/630 (26%), Positives = 254/630 (40%), Gaps = 113/630 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KG---EQPHCGFPER 385
+Q+ E KS + D V+FF+MG FYE+F DA + ++ LD+ KG E P CG P
Sbjct: 9 RQYLEIKSGYPDAVLFFRMGDFYEMFLDDALLASRILDITLTSRNKGSGDEIPFCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + + KL G++V + EQ E P+Q KG +V+RE+ V+T G L E E
Sbjct: 69 SVTPYITKLIENGHKVAICEQVEDPKQ------TKG----IVRREVVRVITPGLLIETEN 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
LS + D +YL+AL Q + +G+ +D++T
Sbjct: 119 LSPD-DNNYLLAL--------HQGAEEQWGVAWLDLST---------------------G 148
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF------WDAETTVLEIKN-I 558
E R E+ P + L+ A+ + L+ D V L EF + A+ V +
Sbjct: 149 EFRVTELAGPGSALA----EAVCINPAEVLLADGVRLEEFPADLKEYLAQKIVSRAPAWV 204
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y R SL A+ G L G+ S L+ A G L+YL+++
Sbjct: 205 YERDYTSSLICDQFGAASPDVLG-----LEGLPSGLL-----------AAGAALYYLREN 248
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K + + ++ LD NLE+ + G SG+L L+
Sbjct: 249 ---------RKSAIPHIRDIRVYQRSEHLALDPATRRNLEITASMAEGKKSGSLLGCLDR 299
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG-LRGVNQPFALEFRKALSRLPDMERLL 737
VTA G R L+ WL PL IR R DAV L G E + + D+ERL
Sbjct: 300 TVTAMGARRLKQWLGYPLVGLEPIRSRLDAVEELLEGATTRD--ELAAQMKGIADLERLN 357
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
R+ +S A+GR+ + ALH L A ++ QL
Sbjct: 358 GRIGMAS-ASGRD------------------LRALHDSLQRIPPLRELMATMQTALLCQL 398
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
+ P + + +V F E G I P G + + D E + +
Sbjct: 399 TKEIDPLEDILDLVGRGIVENPPFSLREG---GIIAP--GYNPELDELRSISHEGKGFIA 453
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK- 916
+ ++R G +S+ Y +E+ +S SVP DY R + RY T +K
Sbjct: 454 RLEAQERARTGISSLKIRFNKVFGYSIEITKSNLASVPADYIRRQTLANAERYITEELKN 513
Query: 917 ---KLLGELSQAESEKESALKSILQRLIGQ 943
K+LG + + S + I +R+ G+
Sbjct: 514 YEEKVLGAEDRIHELEYSLFQEIRERVAGE 543
>gi|399006214|ref|ZP_10708742.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM17]
gi|398122673|gb|EJM12259.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM17]
Length = 859
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 154/635 (24%), Positives = 260/635 (40%), Gaps = 130/635 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNFT---VLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + +++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLKVLQARQTSIGCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
RN+ D A+ L++ ++ L L + E+ L +
Sbjct: 359 ------GLRNARP----RDLAR--LRDALAVL----------PELQVAMTELEAEHLSQL 396
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
P + ++L+ K D N +I GGV YD+ +++ + + +
Sbjct: 397 AVTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQF 449
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 450 LIDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITP 507
Query: 914 NIK----KLLGELSQAESEKESALKSILQRLIGQF 944
+K K L S+A + ++ +++L+ LIG
Sbjct: 508 ELKAFEDKALSAKSRALAREKMLYEALLETLIGHL 542
>gi|386814179|ref|ZP_10101403.1| DNA mismatch repair protein MutS [planctomycete KSU-1]
gi|386403676|dbj|GAB64284.1| DNA mismatch repair protein MutS [planctomycete KSU-1]
Length = 866
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 151/596 (25%), Positives = 251/596 (42%), Gaps = 105/596 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ--PHCGFPERN 386
+Q+ E K +H D ++FF+MG FYELF DA + +K L + KGE P G P +
Sbjct: 3 RQYNEIKIQHKDALLFFRMGDFYELFFEDAKLASKVLGITLTSRSKGENSIPMAGVPHHS 62
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ KL + G++V + +Q + PE+ KG +V R + ++T GT+TE LL
Sbjct: 63 AESYIRKLIKAGHKVAICDQLQNPEE------AKG----IVDRGVTRIITPGTVTEDSLL 112
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ +YLMAL E+N FG+ +D++T R ++D+ L +
Sbjct: 113 EDKSN-NYLMALLETNT---------LFGLSWIDLSTGRF----EVEDIQKDRLFDEFAR 158
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L P E++ P T A + R N ++ W+ +++ TA
Sbjct: 159 LNPSELLMPEETFHNHT--AFVEKIRAEY-NIMITARPDWE-----------FSKDTAYH 204
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+ E G T L G E D G L A G + YLK + +T LR
Sbjct: 205 I----------LTEHFGTTSLEGFDCE-----DVGP-ALGAAGAVIQYLKDT--QKTSLR 246
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
++ + +++D ++LE+ + R+ D G+L A ++ T G R
Sbjct: 247 ----HIIKIQRY---RADNRVLIDKATQQSLELTQTMRTHDREGSLLAIIDQTKTPMGAR 299
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARLFASSE 745
LLR W+ PL S I+ RQ V L +P E R LS + D+ER+ ++ +
Sbjct: 300 LLREWVISPLRISAEIKYRQVGVYEL--FEKPELRRELRNILSNIYDIERISTKI-SCGR 356
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
AN R+ A K+ L + + L DQ + IL TE +
Sbjct: 357 ANARDL-------IALKQSLSKLPA------LKDQIGFCISDILVTTEQQ---------- 393
Query: 806 GLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLKE-Q 863
+ L+ + ++ I GG+ + YD A ++K I + + Q
Sbjct: 394 -----LDTLEEVQTLIGAALVSDPPPTIKDGGLIREGYDPALDELKYISKNGKSWIANFQ 448
Query: 864 RKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + T I + +G + Y +EV ++P+ Y + + K R+ TP +K
Sbjct: 449 AEEIARTGINSLKVGYNKVFGYYIEVTNIHMDNIPKTYIRKQTLKNAERFITPELK 504
>gi|421490293|ref|ZP_15937667.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK1138]
gi|400373698|gb|EJP26626.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK1138]
Length = 853
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 154/657 (23%), Positives = 267/657 (40%), Gaps = 148/657 (22%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 66 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A +G+ +DV T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLAGIYGLAYMDVGTGEF---QVTTLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE ER +L N L++ + ETT +++
Sbjct: 162 CGEIRNLRAREVVIGYEL--PEMERQVLETQMNLLLSQV---------ETTFDDVQ---- 206
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ + L+ + VA G L Y+ K+ L
Sbjct: 207 -LLGKDLSPLEHQVA---------------------------------GKLLEYVHKTQL 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L + +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 233 RELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ RPL + I +RQD V Q F F + +L + D
Sbjct: 282 TKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDSLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE---LMDQACS-----S 784
+ERL +R+ + G+ + K +L A + + L G + L D
Sbjct: 335 IERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEIPE 389
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
L A++++ S +++T G + K FD E + R++ G
Sbjct: 390 LAALIQSAISSDAPNVITEGNII----------KTGFD--ETLDKYRVVMRDG------- 430
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ +IEA ++R+ G ++ KD Y V S VP + +++
Sbjct: 431 -TSWIADIEA-------KERETSGINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
K R+ T + ++ GE+ +A + + I R+ G++ + Q +A
Sbjct: 483 KNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATV 539
>gi|269797932|ref|YP_003311832.1| DNA mismatch repair protein MutS [Veillonella parvula DSM 2008]
gi|269094561|gb|ACZ24552.1| DNA mismatch repair protein MutS [Veillonella parvula DSM 2008]
Length = 877
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 184/424 (43%), Gaps = 91/424 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ---PHCGFPER 385
+Q+ + KS++ ++++FF++G FYELF DA V ++EL++ G++ P CG P
Sbjct: 10 EQYLDIKSRYSEELLFFRLGDFYELFNDDALVASRELNITLTGRPTGDEERTPMCGVPFH 69
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+E L +KGY+V + EQ E P+ + KG +VKR++ V+T GT+
Sbjct: 70 AAESYIETLVKKGYKVAICEQLEDPKAV------KG----IVKRDVIKVITPGTV----- 114
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFG-------ICVVDVATSRIILGQVMDDLDCS 498
+TE+ S + F + DV+T +I ++ + S
Sbjct: 115 ------------MTENGNDARSNNFLSLFYMVKDAWILVFSDVSTGEVIWHRITNCEKRS 162
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
+ LS RP EII P + P+ R + + + +V P S ++
Sbjct: 163 DMYDALSMYRPSEIILPEGTILPQDIRDFIENQFSNVV--FSPFSTYYTQR--------- 211
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
E KA ++ GD G++ E V ALG L YL+
Sbjct: 212 ------EVSEKAVTHF------GD-----LGLMEE---------DVWEALGYMLLYLED- 244
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K E+ + ++ ++LD +L +LE+ N R G GTL L+
Sbjct: 245 --------IIKSEISHINYVHQLSVGNRLILDTSSLRHLEITHNLRDGGQKGTLLDVLDR 296
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERL 736
+T G RLL+ WL PL + I+ RQ AVA L RG + F L + D ER+
Sbjct: 297 TLTPMGARLLKQWLESPLTDVNQIQRRQAAVAELITRGAERSHIQSF---LDCIYDFERI 353
Query: 737 LARL 740
+ R+
Sbjct: 354 VGRV 357
>gi|428220954|ref|YP_007105124.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7502]
gi|427994294|gb|AFY72989.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7502]
Length = 858
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/498 (24%), Positives = 219/498 (43%), Gaps = 80/498 (16%)
Query: 322 DFLRNL-SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ--- 377
D RNL + +Q+ + K K+ V+ +++G F+E F DAH+ ++EL+L ++ G+
Sbjct: 11 DVDRNLLTPMMRQYLDVKEKYPHTVVLYRLGDFFEAFFEDAHLVSRELEL-FLTGKDAGK 69
Query: 378 -----PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P G P +L KG + + +Q ET + ++ +V+RE+
Sbjct: 70 EVGRVPMAGIPYHALERYASQLVEKGISIAICDQVETAAE---------AQGLLVRREVT 120
Query: 433 AVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVM 492
++T GT+ E +L+A + ++L+A+ ++Q+ +G+ D++T + Q+
Sbjct: 121 RIITPGTVMEEGMLTAKKN-NFLVAIANADQN---------WGLAYADISTGEFLTTQIQ 170
Query: 493 --DDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
D+L +L L+P E++ P N +P IL+ + + ++ +P ++F +
Sbjct: 171 GTDNLVQELL-----RLQPAEVLIPVN--APN----ILQKSTD--IHPQLP-TQFCYTQ- 215
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
+++ N ES + N G G LP + A GG
Sbjct: 216 -----RSLANFSLTESKQRILENFKVRSLAGMGCESLP--------------LAIRAAGG 256
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
L YL + K +P Y+VLD NLE+ + ++ G +G
Sbjct: 257 LLEYLATTH---------KNTQVPLRILSTYITSDYLVLDYQTRRNLEITQTAKDGTFTG 307
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRL 730
+L L+ T G R LR WL +PL + I +RQ+ + L N R LS +
Sbjct: 308 SLLWALDRTCTTMGGRALRRWLLQPLKDISHICDRQNTIQELVK-NHTLRKNLRTQLSGI 366
Query: 731 PDMERLLARLFASSEANGRN----SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
D+ERL +R+ A + AN R+ + ++ +D AK ++ L + + LG
Sbjct: 367 YDIERLCSRIGAGT-ANARDLMALATSLIKLKDIAKLLIKAKSPYLTALQTIPPEIIQLG 425
Query: 787 AILENTESRQLHHILTPG 804
L T + L ILT G
Sbjct: 426 DRLSQTLADDLPIILTEG 443
>gi|322377998|ref|ZP_08052485.1| DNA mismatch repair protein MutS [Streptococcus sp. M334]
gi|321280980|gb|EFX57993.1| DNA mismatch repair protein MutS [Streptococcus sp. M334]
Length = 844
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 147/660 (22%), Positives = 272/660 (41%), Gaps = 145/660 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ + NQ FG+ +D+ T V LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGNQ----------FGLAYMDLVTGDFY---VTGLLDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ + E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYGL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKESFEDLHLLDSRLATVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ RPL + I +RQ+ V Q F F + +L
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVV-------QVFLDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R V + K L + ++ L + + AIL
Sbjct: 332 VYDIERLASR---------------VSFGKTNPKDLLQLVTTL-------SSVPRIRAIL 369
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKK 848
E E L +++ G+P + S++ A + +I GG + +D K
Sbjct: 370 EGMEQPALAYLIEQLDGIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDK 422
Query: 849 VKEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ + T + E +R+ G +++ KD Y V S G+VP + +++
Sbjct: 423 YRRVLREGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATL 482
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
K R+ T + ++ G++ +A + + I R+ + ++ + + + A + ++
Sbjct: 483 KNSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|315221533|ref|ZP_07863453.1| DNA mismatch repair protein MutS [Streptococcus anginosus F0211]
gi|315189367|gb|EFU23062.1| DNA mismatch repair protein MutS [Streptococcus anginosus F0211]
Length = 855
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 155/636 (24%), Positives = 259/636 (40%), Gaps = 145/636 (22%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 8 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMA 67
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 68 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 117
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A +G+ +DV T QV D +++
Sbjct: 118 VD----SSKPD-------SQNNFLVALDKLAGIYGLAYMDVGTGEF---QVTTLSDFNMV 163
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE ER +L N L++ + ETT +++
Sbjct: 164 CGEIRNLRAREVVIGYEL--PEMERQVLETQMNLLLSQV---------ETTFDDVQ---- 208
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ + L+ + VA G L Y+ K+ L
Sbjct: 209 -LLGKDLSPLEHQVA---------------------------------GKLLEYVHKTQL 234
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L + +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 235 RELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLMDE 283
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ RPL + I +RQD V Q F F + +L + D
Sbjct: 284 TKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDSLKGVYD 336
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE---LMDQACS-----S 784
+ERL +R+ + G+ + K +L A + + L G + L D
Sbjct: 337 IERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEIPE 391
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
L A++++ S +++T G + K FD E + R++ G D
Sbjct: 392 LAALIQSAISSDAPNVITEGNII----------KTGFD--ETLDKYRVVMRDGTSWIADI 439
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ KE E S +LK I Y KD Y V S VP + +++
Sbjct: 440 ---EAKERETSGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATL 484
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
K R+ T + ++ GE+ +A + + I R+
Sbjct: 485 KNSERFGTEELARIEGEMLEAREKSANLEYEIFMRI 520
>gi|419800656|ref|ZP_14325927.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0449]
gi|385694484|gb|EIG25085.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0449]
Length = 849
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 156/657 (23%), Positives = 273/657 (41%), Gaps = 133/657 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S FG+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------FGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D +++C + LR E++ + PE E + N L
Sbjct: 157 DFTMVCGEIRNLRAREVVLGYAL--PEQEERVFISQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDQLSEL-----EKKTAGKLLQYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A + ++
Sbjct: 486 ERFGTEELARIEGDMLEARDKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVL 542
>gi|418974046|ref|ZP_13521981.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383346023|gb|EID24099.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
ATCC BAA-960]
Length = 844
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 149/655 (22%), Positives = 274/655 (41%), Gaps = 135/655 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ E K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVEIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMAL-TESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
+ S+ PD+ ++L+A+ E NQ FG+ +D+ T V LD
Sbjct: 116 VD----SSKPDSQNNFLVAIDREGNQ----------FGLAYMDLVTGDFY---VTGLLDF 158
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+++C + L+ E++ ++ E E IL N +++
Sbjct: 159 TLVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS-------------------- 196
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
Y + E L+ DS +A + +A L Y+ +
Sbjct: 197 -YEKENFEDLHLLDSRLATVEQ--------------------------AASSKLLQYVHR 229
Query: 618 SFLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + E L ++E+ K ++ +D +L++ EN+RSG G+L+
Sbjct: 230 TQMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWL 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDME 734
L+ TA G RLLR+W+ RPL + I +RQ+ V G F + +L + D+E
Sbjct: 279 LDETKTAMGMRLLRSWIHRPLIDKERIVQRQEVVQVFLG--HFFERSDLTDSLKGVYDIE 336
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL +R+ + G+ + K +L QL +S + + AILE E
Sbjct: 337 RLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILEGMEQ 374
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIE 853
L +++ +P + S++ A + +I GG + +D K + +
Sbjct: 375 PVLAYLIAQLDAIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDKYRRVL 427
Query: 854 ASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
T + E +R+ G +++ KD Y V S G+VP + +++ K R
Sbjct: 428 REGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPVHFFRKATLKNSER 487
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+ T + ++ G++ +A + + I R+ + ++ + + + A + ++
Sbjct: 488 FGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|70728591|ref|YP_258340.1| DNA mismatch repair protein MutS [Pseudomonas protegens Pf-5]
gi|90109853|sp|Q4KHE3.1|MUTS_PSEF5 RecName: Full=DNA mismatch repair protein MutS
gi|68342890|gb|AAY90496.1| DNA mismatch repair protein MutS [Pseudomonas protegens Pf-5]
Length = 859
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 155/636 (24%), Positives = 257/636 (40%), Gaps = 132/636 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGP----VERQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E K++ +
Sbjct: 173 RINPVELLIPDDWPQGLPAEKRRGVRR--RAP-----------WDFERDSAH-KSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ETLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
A G RLL WL RPL + ++ RQ ++ L + E + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLKVLEARQSSITCLL---DGYRFERLQPQLKEIGDIERILARI 358
Query: 741 FASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
N R + L + AA +LQE ++ L E+ L+
Sbjct: 359 ---GLRNARPRDLARLRDALAALPELQEAMTEL--------------------EATHLNQ 395
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTK 858
+ P + ++L K D N +I GGV YD+ +++ + + +
Sbjct: 396 LAATTSTYPELAALLA--KAIID-----NPPAVIRDGGVLKTGYDAELDELQSLSENAGQ 448
Query: 859 HL------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
L ++ R L + + Y I Y +E+P P DY R + KG R+ T
Sbjct: 449 FLIDLEAREKARTGLANLKVGYNRIHG--YFIELPSKQAEQAPADYIRRQTLKGAERFIT 506
Query: 913 PNIK----KLLGELSQAESEKESALKSILQRLIGQF 944
P +K K L S+A + ++ ++L+ LI
Sbjct: 507 PELKEFEDKALSAKSRALAREKMLYDALLETLISHL 542
>gi|319940116|ref|ZP_08014470.1| DNA mismatch repair protein mutS [Streptococcus anginosus 1_2_62CV]
gi|319810830|gb|EFW07157.1| DNA mismatch repair protein mutS [Streptococcus anginosus 1_2_62CV]
Length = 853
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 158/651 (24%), Positives = 266/651 (40%), Gaps = 136/651 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 66 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A +G+ +DV T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLSGIYGLAYMDVGTGEF---QVTSLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + E ER +L N L++ + ETT +++
Sbjct: 162 CGEIRNLRAREVVVGYEL--SEMERQVLEIQMNLLLSQV---------ETTFDDVQ---- 206
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ + L+ + VA G L Y+ K+ L
Sbjct: 207 -LLGKDLSPLERQVA---------------------------------GKLLQYVHKTQL 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L + +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 233 RELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ RPL + I +RQD V Q F F + L + D
Sbjct: 282 TKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDTLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAILE 790
+ERL +R+ + G+ + K +L A + + L G + +++ + L I E
Sbjct: 335 IERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEIPE 389
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVK 850
QL ++P P +++ K FD E + R++ G D + K
Sbjct: 390 LANLIQL--AISPDA--PNVITEGNIIKTGFD--ETLDKYRVVMRDGTSWIADI---EAK 440
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
E EAS +LK I Y KD Y V S VP + +++ K R+
Sbjct: 441 EREASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATLKNSERF 488
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
T + ++ GE+ +A + + I R+ G++ + Q +A
Sbjct: 489 GTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATV 539
>gi|440795835|gb|ELR16949.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1281
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 156/636 (24%), Positives = 253/636 (39%), Gaps = 67/636 (10%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-PHCGFPERNFSM 389
++Q+ K K+ D ++ + G F DA + +K L + + + P +
Sbjct: 356 EQQFVAVKEKNPDVLLIVECGYRCRFFGEDAEIASKVLHIACFQAHNFMNASIPTNRLHI 415
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL------TEG 443
+ + +GY+V +V+QTET + +K RE+ A+ TK T T
Sbjct: 416 HTK---HQGYKVGLVKQTETAAI----KAAGATKSGPFARELSAIYTKATYIPEDVETIA 468
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
+ +YLM L E + S F I + ++T I+ DD L
Sbjct: 469 TVGGTASSPNYLMCLYEQLNEDNTDSVH--FSILAIQLSTGDIVYDDFDDDFAREALETR 526
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
+ L+P E+I L+P+T R L+N L P T++E Y
Sbjct: 527 ILHLQPAELIL-QQTLTPQTTR---------LLNRLCPSEATLGINKTLVENLEDYLWDY 576
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++ A A S ++ L + E + G V+ L + L+K L E
Sbjct: 577 DSAIGTAMEFYAVSPSKRPSLHGVKFGSGEALPNG-----VVICLSMMIGRLEKCQL-ED 630
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+LR S F + M + NLE F N +G G+LY +NH TAF
Sbjct: 631 VLRLT-------SNFRHFTRASTMSVSGITATNLEFFNNQDNGHYKGSLYWLMNHTQTAF 683
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLLR WL +PL I ER DAVA L + P + LPD+ER L +
Sbjct: 684 GARLLRKWLQQPLLEKKFIDERLDAVAELMETSAPAIKLMLDVVKALPDLERGLVQCH-- 741
Query: 744 SEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
Y+ + Q F+S L + + + A+ + +S L +L
Sbjct: 742 -------------YKRCSP---QAFLSLLQSFKKVSKCAPPRAALEQQVKSTLLRSLL-- 783
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIE---ASLTKH 859
P + + +F +A A + VD D + K EIE L H
Sbjct: 784 --HYPDMCDDVDYFLNAMSTKAAQTGKK--RKLFVDSDQFPEVAKYHSEIENVKKKLHDH 839
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
L E R L S+ YVT YL+E+ + S+P+D+ L + RY TP I L+
Sbjct: 840 LAEVRDELNMPSLDYVTRSNAKYLIELTLAKAKSIPKDWVLVNGTTKLGRYQTPKIVGLM 899
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+++ + + A + +G+F ++ + +++
Sbjct: 900 QKMALNKEKLTIAAEQAWDAFLGEFKAKYDVFHEVM 935
>gi|88658581|ref|YP_507620.1| DNA mismatch repair protein [Ehrlichia chaffeensis str. Arkansas]
gi|123493029|sp|Q2GG13.1|MUTS_EHRCR RecName: Full=DNA mismatch repair protein MutS
gi|88600038|gb|ABD45507.1| DNA mismatch repair protein MutS [Ehrlichia chaffeensis str.
Arkansas]
Length = 804
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 148/626 (23%), Positives = 269/626 (42%), Gaps = 113/626 (18%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPERNFSM 389
+Q+ KS++ + ++F+++G FYELF DA ++ L++ K G P CG P +
Sbjct: 11 MQQYMMLKSQYKEYLLFYRLGDFYELFFDDAIETSRILNIVLTKKGNVPMCGVPFHSSES 70
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ +L + GY++ + EQ ET E+ K++G K +VKR++ +VT GT+ E LL A
Sbjct: 71 YLNRLVKLGYKIAICEQLETSEE----AKKRGYK-ALVKRDVVRIVTPGTILEDSLLEAK 125
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCLLSELR 508
E+N + D + I ++++T + LD L +
Sbjct: 126 ----------ENNYLSCIVNVDHNYAIAWLELSTGLFYYHTTELHKLDSD-----LFRIN 170
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
P E++ ++ ++ +ILR + + F+D + + N+Y
Sbjct: 171 PKEVLISDKLVELDSIYSILRKYKFSVTQ---YSGSFFDVSRSYNTLCNVY--------- 218
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK---KSFLDETLL 625
G++ L G+ GD ++ ++ G L Y+K K L + L
Sbjct: 219 --------------GISTLKGL-------GDLKNEEIAVCGSLLEYVKATQKGNLPQ--L 255
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F K +K +M +DA AL NLE+F ++SGD G+L + +++ +TA G
Sbjct: 256 EFPK----------AYSKGDFMFIDAAALRNLELF-CTQSGDLEGSLISSIDYTITACGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ L+ PL S I R D V ++ R+ L + D+ER+L R+
Sbjct: 305 RLLKRCLSAPLACSHAINRRLDIVEFFVN-DRTLCRGVRETLRGIADIERILTRI----- 358
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAILENTESRQLHHILTP 803
G+ S K + ++ + LH + ++ CS LG + + L +L P
Sbjct: 359 KVGKCSPKDLYALKLTLDKIFVLLDLLHKFDSSVVGDFCSRLGK--YDDLCKTLDDVLIP 416
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA---SLTKHL 860
NN + G ++ DYD+ + I++ L + L
Sbjct: 417 -----------------------NNVNNVKDGGFINPDYDAQLSEYIYIQSYSNDLIQEL 453
Query: 861 KEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ + + + + L Y +EV S S +D+ R + RY T +K L
Sbjct: 454 RDKYRNITNIQSLKILYNNILGYYVEVSSSYLIS-DKDFIHRQTLANSIRYTTSELKAL- 511
Query: 920 GELSQAESEKESALKSILQRLIGQFC 945
S+ S +++A+ ++ ++ GQ C
Sbjct: 512 --ESKIISARDAAI-NLEVKIFGQLC 534
>gi|400291073|ref|ZP_10793100.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
gi|399921864|gb|EJN94681.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
Length = 849
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 161/630 (25%), Positives = 254/630 (40%), Gaps = 127/630 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G KQ+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMKQYLDIKEDYPDAFLLFRMGDFYELFYEDAVKAARILEISLTSRNKNADNPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+ + VVKRE+ V+T GTL
Sbjct: 66 GVPYHSAQQYIDVLVELGYKVAIAEQMEDPK----------TAVGVVKREVVQVITPGTL 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRC-FGICVVDVATSRIILGQVMDDLDC 497
+ SA PD++ +L+AL TD FG+ +D++T + D
Sbjct: 116 VD----SAKPDSANNFLVAL----------DTDGSRFGLSYMDLSTGEFYATTLAD---- 157
Query: 498 SVLCCLLSE---LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
L + SE L+ E++ ++ E I R N L++ E TV E
Sbjct: 158 --LTAVRSEVLNLKARELVLGFDL--DEEAENIFRKQMNLLLS----------VEKTVYE 203
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
D ++ +SQ LT L L+A G L Y
Sbjct: 204 ----------------DLHLLDSQ-----LTDLE----------------LAAAGKLLQY 226
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+ + K EL K Y+ + +L++ EN+RSG G+LY
Sbjct: 227 VHTT---------QKRELSHLQKLVHYEIKDYLQMTYTTKSSLDLLENARSGKKHGSLYW 277
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDM 733
L+ TA G RLLRTW+ RPL + LI +RQD + ++Q F + +L + D+
Sbjct: 278 LLDETKTAMGTRLLRTWIDRPLVSHKLISKRQDIIQVF--LDQFFERSDLSDSLKGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL +R V + A K L + L + + AILE+ +
Sbjct: 336 ERLASR---------------VSFGKANPKDLLQLGQTLAQVPI-------IKAILESFD 373
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L ++ LP + +++ D + G II G D D K ++E
Sbjct: 374 SPALEDLVGQIDPLPELEELIRSAIDP-NAPMTITEGSII-RAGFDETLDKYRKVMREGT 431
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ ++R G +++ KD Y V S VP + +++ K R+ T
Sbjct: 432 GWIADIEAKERTASGISTLKIDYNKKDGYYFHVTNSNLSLVPEYFFRKATLKNSERFGTA 491
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQ 943
+ K+ GE+ +A E + I R+ Q
Sbjct: 492 ELAKIEGEMLEAREESANLEYDIFMRIRAQ 521
>gi|332799274|ref|YP_004460773.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
gi|332697009|gb|AEE91466.1| DNA mismatch repair protein mutS [Tepidanaerobacter acetatoxydans
Re1]
Length = 869
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 156/601 (25%), Positives = 247/601 (41%), Gaps = 113/601 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQPHCGFPERNF 387
+Q+ E K K+ D ++FF++G FYE+F DA++ +KEL++ + P G P
Sbjct: 7 QQYKEIKDKYRDYIVFFRLGDFYEMFFDDAYICSKELEITLTSRDSDNKVPMAGVPYHAA 66
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ KL KGY+V++ EQ E P + KG +VKRE+ +VT GT+T+ L
Sbjct: 67 DQYIAKLVAKGYKVVICEQVEDP------KLAKG----IVKREVVKIVTPGTITDLNALE 116
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
N + +YL + ++ FG+ VD+ T + L S
Sbjct: 117 ENKN-NYLGCVFKNKHE---------FGLAFVDLMTGEFDITN------------LKSSY 154
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESL 567
EII + SP R L N LS+ + NR E+L
Sbjct: 155 PYHEIINEVSRFSP----------RECLANH--ELSQ-----------EKSLNRKLKENL 191
Query: 568 NKA----DSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
D+ + Q+ L G E I ++ L A G L YL ++
Sbjct: 192 KLCFTFRDATYFDEQSALILLMSQFG--EEKIKKLENRKPALIAAGACLRYLNET----- 244
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
K L + +MVLD +NLE+ EN R +G+L ++ TA
Sbjct: 245 ----QKLNLSHINSISFYENHDFMVLDFICSKNLEITENLRDRKKTGSLLWVMDKTSTAM 300
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFA 742
G RLLR WL +PL + I++RQDA+ L N F + ++ L + D+ERL +L
Sbjct: 301 GARLLRKWLEQPLLDILKIKQRQDAIEEL--FNDFFLRSDLKEQLKNIYDIERLSGKLVC 358
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
+ AN R+ L + ++ + IL S+ LH I
Sbjct: 359 GN-ANARD---------------------LLAIKNTIKSLPQIKHILTRCNSKLLHQIYE 396
Query: 803 PGKGLPAIVSILKH--FKD-AFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
L I +L+ F+D EAN + G + + D K +E +A +
Sbjct: 397 QLDPLEDICLLLEKSIFEDPPLTIKEAN-----VIKDGYNSEIDMLRKASREGKAWIADL 451
Query: 860 LKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+++R+ T I + IG + Y +EV +S VP +Y + + RY T +K
Sbjct: 452 ERKERE---STGIKSLKIGFNKVFGYYIEVTKSNLSMVPENYIRKQTLANAERYITEELK 508
Query: 917 K 917
+
Sbjct: 509 E 509
>gi|431907876|gb|ELK11483.1| DNA mismatch repair protein Msh3 [Pteropus alecto]
Length = 1080
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 135/640 (21%), Positives = 261/640 (40%), Gaps = 88/640 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
+ Q+ E K + D ++ + G Y F DA + A+EL++ ++ P +
Sbjct: 224 ESQYIEMKQQQKDAILCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPAHRLFV 283
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V +L KGY++ D V EI +
Sbjct: 284 HVRRLVAKGYKL---------------------DDAVNVDEIMT---------------D 307
Query: 450 PDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
SYL+ + E+ ++ + F GI V AT ++ D S L + L+
Sbjct: 308 TSTSYLLCICENKENLKEKKKGSIFIGIVGVQPATGEVVFDSFQDSASRSELETRILSLQ 367
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
PVE++ P++ LS +TE I R T + +D + + + E + + +T
Sbjct: 368 PVELLLPSH-LSEQTEMLIHRATAVSVRDDRIRVERM---DNMYFEYSHAFQMVT----- 418
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
+N + G GI+ + V+ +L + YLK+ L++ L +
Sbjct: 419 ---EFYSNDVVDIKGSQSFSGII-------NLEKPVICSLAAIIRYLKEFNLEKVLSKPK 468
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
F+ L GDM +M ++ L NLE+ +N + G+L+ L+H T+FG+R L
Sbjct: 469 NFKQLS----GDME---FMTINGTTLRNLEILQNQTDKKTKGSLFWVLDHTKTSFGRRKL 521
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANG 748
+ W+ +PL I +R DAV+ + + L +LPD+ER L ++
Sbjct: 522 KKWVTQPLLKLRKINDRLDAVSEVLHSESSVFDQIENHLRKLPDIERGLCSIY------- 574
Query: 749 RNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP 808
++ + ++ + AL+ + QA + A+ + +S L + +P
Sbjct: 575 --------HKKCSTQEFFLIVKALYHLKSEFQAL--IPAVNSHVQSDLLQTFILE---IP 621
Query: 809 AIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKEIEASLTKHLKEQRK 865
++S ++H+ + A + + D+ ++ ++E+ + HL+E RK
Sbjct: 622 ELLSPVEHYLKILNEQAAKIGDKTELFKDLS-DFPLIKRRKDEIQEVTDKIQIHLQEIRK 680
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
+L + S YVT+ +++E+ S +P D+ S K R+ +P + + L+Q
Sbjct: 681 ILKNPSAQYVTVSGQEFMIEIKNSAVSCIPADWIKVGSTKAVSRFHSPFVVENYRHLNQL 740
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
+ + + F EH++ + V A + I
Sbjct: 741 REQLVLDCNAEWLDFLENFSEHYHSLCKAVHHLATIDCIF 780
>gi|254582410|ref|XP_002497190.1| ZYRO0D17490p [Zygosaccharomyces rouxii]
gi|186703828|emb|CAQ43516.1| MutS protein homolog 3 [Zygosaccharomyces rouxii]
gi|238940082|emb|CAR28257.1| ZYRO0D17490p [Zygosaccharomyces rouxii]
Length = 1006
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 165/663 (24%), Positives = 283/663 (42%), Gaps = 138/663 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---------------E 376
+Q E K K+ DK++ ++G Y+ F DA V ++ L ++ + G +
Sbjct: 129 QQVKELKLKNFDKLLVVRVGYKYKCFAQDAVVASRILHIKLVPGKLTLDDSDPQDLQHKQ 188
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVV 435
+C FP+ ++++ +L + +V +VEQ ET L++ S K V +R++ V
Sbjct: 189 FAYCSFPDSRINVHLVRLVTRNLKVGIVEQVETSA---LKKYSADSLKSTVFERKVTTTV 245
Query: 436 TKGTLTEGELLSANP-----DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
+K T + ++ D S + AL + + + VD+ +I +
Sbjct: 246 SKATYGINNTVESDKKRILGDTSSIWALDVECHDDGTYH----YWLVSVDLNNGEVIHDE 301
Query: 491 VMDD-LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAE 549
+ S L + L PVE+I N+ P DA
Sbjct: 302 FEEQKHSTSQLELRMKYLEPVELITYRNL----------------------P-----DAV 334
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGI--LSELISTGDSGSQVLSA 607
T VL+ R +SL + E T LP + L + ++ +++SA
Sbjct: 335 TKVLQ------RANNDSL----------RIEDRKETVLPQLEGLKQHLNLPAETFKLISA 378
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L G L + + +E LL L S + + K +M+L++ ALE+L++F N G
Sbjct: 379 LFGCL----EDYKNEELL-------LIASNYKPFSSKAHMLLNSNALESLDIFTN---GS 424
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG-VNQPFALEFRKA 726
G+L+ L+H TAFG R LR W+++PL N I +R DAV ++ +N+ F +
Sbjct: 425 GKGSLFWVLDHTRTAFGYRQLREWISKPLLNRTDIEDRLDAVECVKEEINKLFFESLNQL 484
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF---ISALHGCELMDQACS 783
L PD+ R L R+ A GR S K V + KQL F SA H + + S
Sbjct: 485 LKNTPDLLRTLNRI-----AYGRTSRKEVYF---FLKQLSLFGGHFSA-HSVYINSEIRS 535
Query: 784 SLGAI-----LENTESRQLHHILTPGKGLPAIVSIL-----------KHFKDAFDWVEAN 827
S GA+ L T +++ L +P ++S++ KH F+ +
Sbjct: 536 SNGALYHRSKLLATLFQEMADFL-DNSPMPYLMSMINVSAVMEKDMEKHVTGFFNLNNYD 594
Query: 828 NSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLLE 885
NS II +++ ++ LT+ L +K+LG + Y KD YL+E
Sbjct: 595 NSEVIIQRQ----------REIGAVQDELTEELHRVQKMLGRPYLKY----KDEVEYLIE 640
Query: 886 VPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAE----SEKESALKSILQRLI 941
V S ++P D+ ++ K R+ TP KL+ L + +E E+ + LQ++
Sbjct: 641 VRNSQLKNLPPDWVKVNNTKMVSRFHTPITIKLVERLQYHKDMLYNEAEAEYRRFLQKIT 700
Query: 942 GQF 944
++
Sbjct: 701 KEY 703
>gi|119482682|ref|XP_001261369.1| DNA mismatch repair protein Msh3, putative [Neosartorya fischeri
NRRL 181]
gi|190359847|sp|A1DCB2.1|MSH3_NEOFI RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|119409524|gb|EAW19472.1| DNA mismatch repair protein Msh3, putative [Neosartorya fischeri
NRRL 181]
Length = 1117
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 161/683 (23%), Positives = 271/683 (39%), Gaps = 109/683 (15%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH------ 379
+KQ E K KHMD V+ ++G + F DA + AKEL + + G E P
Sbjct: 208 EKQVIEIKRKHMDTVLVIEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAHLDR 267
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P ++V++L GY+V VV Q ET + +++ R++ + T
Sbjct: 268 FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAAL----KAVGDNRNAPFSRKLTNLYT 323
Query: 437 KGTL----------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
KGT T A+P Y++ +TE+N GI V T I
Sbjct: 324 KGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKGWGNDEKVHVGIVAVQPNTGDI 383
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLVPLS 543
I D S + L + P E++ LS TE+ +++H +N D V +
Sbjct: 384 IYDDFEDGFMRSEVEARLLHIAPCELVIVGE-LSKATEK-LVQHLSGSKLNTFGDKVRVD 441
Query: 544 EFWDAETTVLE----IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+T V E + N Y A AN+ + L +L +
Sbjct: 442 RVAKKKTAVAESHSHVANFY---------AAKLKAANTADDAPASNLLQKVL-------N 485
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
QV L + +L + L E + K+ F + + +M+L+A L +LE+
Sbjct: 486 LPEQVTVCLSAMIEHLTEYGL-EHIFELTKY-------FQHFSSRSHMLLNANTLVSLEI 537
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
++N + G+L+ L+ T FG+RLLR W+ RPL + + ER +AV L+ ++
Sbjct: 538 YQNQTDHSAKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEELKSPDRTV 597
Query: 720 ALE-FRKALSRL-PDMERLLARLFASSEANGRNSNKVVL------------YEDAAKKQL 765
+E + L R+ D+E+ L R++ G+ + +L Y D +
Sbjct: 598 QVERLKILLGRIKSDLEKNLIRIY-----YGKCTRPELLTVLQTLQTIAQEYVDVKTPED 652
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV- 824
F S + G +A + + +ILE+ K L I D +++
Sbjct: 653 SGFTSPILG-----EAIARVPSILEDVV-----------KFLNKINMHAARNDDKYEFFR 696
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
E+ + I H C + +E L +H +L +TYVT YL+
Sbjct: 697 ESEETEGISEH---------KC-GIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLI 746
Query: 885 EVPESLRG--SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
EV + VP + S K R+ TP + +LL + Q + +A L+
Sbjct: 747 EVENTAAAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLA 806
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
+ ++ +R V + A L +L
Sbjct: 807 EIATNYQSFRDSVQSLATLDCLL 829
>gi|347755457|ref|YP_004863021.1| DNA mismatch repair protein MutS [Candidatus Chloracidobacterium
thermophilum B]
gi|347587975|gb|AEP12505.1| DNA mismatch repair protein MutS [Candidatus Chloracidobacterium
thermophilum B]
Length = 880
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 159/632 (25%), Positives = 255/632 (40%), Gaps = 98/632 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q++ K+K+ ++FF++G FYE+F DAH+ ++ELDL + P CG P
Sbjct: 3 RQYFAIKAKYPGTLLFFRLGDFYEMFFEDAHIASRELDLTLTARHKDTAQPVPMCGVPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L +GYRV + EQTE E K K+V+R + VVT GT E L
Sbjct: 63 AAAGYIARLVERGYRVAICEQTE----------EATGKTKLVERAVVRVVTPGTSLEETL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+ + +L AL+ + ++ A + ++DV T + ++ + LL
Sbjct: 113 LTGAEN-RFLAALSSNAEATA---------VALLDVTTGEFSVTELRGEAHLEAALNLLE 162
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK-NIYNRITA 564
P E+ L+P+ T PL++ P DA E K + R TA
Sbjct: 163 RFDPREV------LAPQ--------TLAPLLSAAFPQPPSPDAPA---EGKPSGPPRFTA 205
Query: 565 -----ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
E L+ A E G+ L G G G + A+G L+ +
Sbjct: 206 ALTLTEQLSFAPDAGEALLREHFGVRSLAGF-------GLEGRPL--AIGAAAAVLR--Y 254
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
L ET + A+ +G + LD L+NLEV + SG L L+
Sbjct: 255 LRETQMSDARH----VTGVTWFETTTTLELDLLTLKNLEVITGA-SGSKRDALLGVLDDT 309
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLA 738
+T G RLLR WL RP +I R DAV L +P + FR+ L + D+ERL+
Sbjct: 310 ITNMGARLLRQWLLRPSLELPIIEARLDAVDELH--RKPIERDGFRQLLRDIQDIERLVG 367
Query: 739 RLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
RL S + D A + +C+ L A+ E +
Sbjct: 368 RL----------SLNLATPRDVAA---------------LRTSCAHLPALRERLLACTSS 402
Query: 799 HILTPGKGLPAIVSILKHFKDAFD---WVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+LT G+ L + + + V+ + G I P ++D + +
Sbjct: 403 LLLTLGESLDPCADLHQRMAETLSDAPPVKLDEGGVIRPGFSAELDELRHLRHDASGAMA 462
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
+ + +R +G + + + Y +EV ++ VP DYE + + RY TP +
Sbjct: 463 AIEQRERERTGIGSLKVRFNQVFG--YYIEVTKANLKYVPADYERKQTIANGERYTTPEL 520
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEH 947
K+L L AE + + Q L H
Sbjct: 521 KQLEARLRDAEVRLLALETQLFQELRAFLVAH 552
>gi|126730094|ref|ZP_01745906.1| DNA mismatch repair protein [Sagittula stellata E-37]
gi|126709474|gb|EBA08528.1| DNA mismatch repair protein [Sagittula stellata E-37]
Length = 877
Score = 117 bits (294), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 128/424 (30%), Positives = 188/424 (44%), Gaps = 74/424 (17%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQ 377
+ N++ Q+ E K+++ D ++F++MG FYE+F DA ++ LD+ K +
Sbjct: 1 MSNVTPMMAQYLEIKAQYPDALLFYRMGDFYEMFFDDAVAASEALDIALTKRGKHDGDDI 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + L RKG+RV V EQ E+PE+ K++G K VVKR++ +VT
Sbjct: 61 PMCGVPVHAAEGYLLTLIRKGFRVAVGEQLESPEE----AKKRGYK-AVVKRDVVRLVTP 115
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTLTE LL A ++L AL A TD G V + LGQ
Sbjct: 116 GTLTEDTLLEARRH-NFLCALGNVRDEWALAWTDISTGAFHV------MPLGQ------- 161
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ + L+ L P E++ + ET R +L DL E TVL +
Sbjct: 162 ARIGAELARLAPSEVLVSEKV--DETLRDVL--------GDL-------GIEATVLGAAS 204
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
DS A + C + L G LS +G + YL
Sbjct: 205 F------------DSGAAEQR------LCSTFAVQTLAGFGSFSRAELSGMGALVDYLDI 246
Query: 618 SFLDET-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ + LL+ + E A M +DA NLE ++ SG SG+L A +
Sbjct: 247 TQKGQLPLLQTPRQE----------AGARLMQIDAATRRNLE-LTSAMSGGRSGSLLAAI 295
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+ VT+ G RLL ++ P + +I ER DAV GV F+ R+ L R+PD+ER
Sbjct: 296 DRTVTSGGARLLERRVSSPSRDLAVIEERLDAVRW--GVEGSFSDALRELLRRVPDVERA 353
Query: 737 LARL 740
L+RL
Sbjct: 354 LSRL 357
>gi|302772959|ref|XP_002969897.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
gi|300162408|gb|EFJ29021.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
Length = 876
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 160/669 (23%), Positives = 266/669 (39%), Gaps = 102/669 (15%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q E K K D ++ ++G + F DA A L + Y P +
Sbjct: 4 EQQIVELKKKFPDVLLMVEVGYKFRFFGEDAEKAANVLGIVAYYSHNFLTASVPTFRLHV 63
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V +L GY+V VV+QTET + +K R++ A+ TK TL GE L
Sbjct: 64 HVRRLVEAGYKVGVVKQTETAAI----KAHGTNKAGPFSRDLSALYTKATLEAGEFLGGE 119
Query: 450 PD---------ASYLMALTE---------SNQSPASQSTDRCFGICVVDVATSRIILGQV 491
+SY+M + E + + S D FG+ V+ +T ++ G
Sbjct: 120 ESGERDGPIRLSSYIMCVVEEAITEHKANAGKDEVRGSFDARFGVVAVETSTGDVMYGHF 179
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN-DLVPLSEFWDAET 550
MD + + L L P E+ + LS T++ ++ + V + P + F +
Sbjct: 180 MDTVTRTELESRLLACAPAEL-LLSASLSASTKKLLMDYAVAADVRVEKTPENSFENG-G 237
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
TV + + Y + + D V A + L +P I V++A
Sbjct: 238 TVAALADFYGSLASSKKGCLDEKV---DAGLEALMTMPEI-------------VVAAFAH 281
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
YLK+ F E +LR F A + M L + LE+ N G +G
Sbjct: 282 IFAYLKQ-FNLENVLRLGAL-------FRPFAGQQEMTLSPNTIRQLEILHNQTDGTENG 333
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--------RGVNQPFALE 722
+L+ +NH TAFG RLL+ W+ PL + LI +R DAVA + RG
Sbjct: 334 SLFWLMNHTKTAFGARLLKYWVTHPLRDRMLISQRLDAVAEIAESIGDKGRGTTVATLAS 393
Query: 723 FRKALSRLPDMERLLARLFASS----------EANGRNSNKVVLYEDAAKKQLQEFISAL 772
L +LPD+ER + R++ + A + +++ DA L ISA+
Sbjct: 394 TLLLLGKLPDLERGITRIYHKTATTYEFINVINAIMKAASQFQRVRDARSALLSRLISAV 453
Query: 773 HGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
++D A + ++ N E+ A D + +G+
Sbjct: 454 TSTSVIDHANKLVTSL--NAEA-----------------------AAAGDKINLFVAGQ- 487
Query: 833 IPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG 892
P + D + +K IE L L RKLL +++ Y+++ +L+EVP R
Sbjct: 488 FP------EVDECKENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGTSFLVEVPCVQR- 540
Query: 893 SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWR 952
VP D+ +S K RY P + + ++ A+ + + + F +H ++R
Sbjct: 541 -VPADWVKINSTKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTSYHMEFR 599
Query: 953 QMVAATAGL 961
V A A L
Sbjct: 600 AAVQALAAL 608
>gi|254167004|ref|ZP_04873857.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
gi|197623860|gb|EDY36422.1| DNA mismatch repair protein MutS [Aciduliprofundum boonei T469]
Length = 823
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 151/598 (25%), Positives = 251/598 (41%), Gaps = 129/598 (21%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ----PHCGFPERN 386
+Q+ K+K+ D ++FF++G FYE FE DA + +KEL++ + + P G P
Sbjct: 1 MRQYHRIKAKYKDTILFFRVGDFYETFEDDAKLVSKELNIVLTRRSKDEPVPMAGIPYHA 60
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L +KGY+V + EQ E P K +G +V+R++ VVT GTL E LL
Sbjct: 61 LDAYLSRLVKKGYKVAICEQLEDPA------KARG----LVRRDVVRVVTPGTLIEDTLL 110
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ D ++L ++ + +G +D++T G+ LD L +
Sbjct: 111 T--EDNNFLFSIYKHKD---------IYGFAALDISTGEFFAGE----LDFYGLNAEILR 155
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L+P EI+ N +N P+ + E N Y +I E
Sbjct: 156 LQPSEILS------------------NSKLNLDFPIKILAE------EYYNDYEKILKEH 191
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
A + G G+ G+ G L A L Y K++ ++
Sbjct: 192 FKVA-------ELSGFGI-------------GEYG---LMAAASALKYAKENTMN----- 223
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+L + K Y++LD+ L+NLE+F N G+ TLY +N C T G R
Sbjct: 224 ----DLKNITSLQGYFKDKYLILDSTTLKNLEIFHNV-LGEDKYTLYHTMNKCETPMGAR 278
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA 746
LL+ W+ RPL + I +R DAV L Q R LSR+ D+ER+ R+ +
Sbjct: 279 LLKRWMQRPLKDIDEINDRLDAVEELAN-KQLLQDSIRTILSRIKDIERIKTRV-----S 332
Query: 747 NGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKG 806
GR A + L +L + + S IL+N+ S+ G
Sbjct: 333 LGR----------AVPRDLISLKESLKQADKLRINFES--KILKNSASKIY--------G 372
Query: 807 LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS---LTKHLKEQ 863
+ I+ ++++ A N + G + Y+ ++K I ++ L ++E+
Sbjct: 373 IEGIIELIEN---------AINGDYPVGEGVIKEGYNEELDEIKRIASNAKLLIGKMEER 423
Query: 864 RKLLGDTSITYVTIG-KDL--YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+ T I + IG D+ Y +EV +S VP+ Y + + K R+ T +K L
Sbjct: 424 ER--RSTGIKNLKIGYNDVMGYYIEVSKSNLSKVPKHYRRKQTLKNSERFITDELKDL 479
>gi|414564975|ref|YP_006043936.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338848040|gb|AEJ26252.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 837
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 160/645 (24%), Positives = 256/645 (39%), Gaps = 125/645 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K + D + F+MG FYELF DA A+ L++ + P G P
Sbjct: 2 QQYLDIKKNYPDAFLLFRMGDFYELFYEDAVKAAQILEIGLTSRNKNADNPIPMAGVPYH 61
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++ L G++V + EQ E P+Q VVKRE+ V+T GT +
Sbjct: 62 SVQQYIDVLIDLGHKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTAVD--- 108
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S+ PD+ +N A + +G+ +DV+T D D + + +
Sbjct: 109 -SSRPDSP-------NNFLVAVDFDGKAYGLSYMDVSTGEFF---ATDLADFASVKSEIQ 157
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L+ E++ + E E+AIL N L++ E T LE
Sbjct: 158 NLKAKEVLLGFEL--SEEEQAILVKQMNLLLS----------FEMTALE----------- 194
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
DS + + Q LT + LSA G L Y+ +T L
Sbjct: 195 -----DSPLIDHQ-----LTAVE----------------LSAAGKLLHYVH-----QTQL 223
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
R EL K Y+ + +L++ EN+R+G G+LY L+ TA G
Sbjct: 224 R----ELSHLQALVHYDIKDYLQMSYATKSSLDLLENARTGKKHGSLYWLLDETKTAMGM 279
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDMERLLAR 739
RLLR W+ RPL S I ERQ+ + Q F F + +L + D+ERL +R
Sbjct: 280 RLLRAWIDRPLVTSEAILERQEII-------QVFLNAFIERTDLSDSLKGVYDIERLSSR 332
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
V + A K L + L + AILE S L
Sbjct: 333 ---------------VSFGKANPKDLLQLGHTL-------AKVPYIKAILEAFNSPYLDK 370
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKH 859
++ LP + +++ D D N G II G D D K ++E +
Sbjct: 371 LVNQIDTLPELEHLIRSAIDP-DAPATINEGNII-RTGFDERLDHYRKVMREGTGWIADI 428
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
++R+ G +++ KD Y V S G VP + +++ K RY T + K+
Sbjct: 429 ETKERQASGISNLKIDYNKKDGYYFHVTNSNLGMVPDHFFRKATLKNSERYGTAELAKIE 488
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
G++ +A E S I R+ Q + ++ +Q+ A A + ++
Sbjct: 489 GQMLEAREESSSLEYDIFMRIRAQVETYIDRLQQLAKALATVDVL 533
>gi|406981178|gb|EKE02687.1| hypothetical protein ACD_20C00346G0014 [uncultured bacterium]
Length = 863
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 191/444 (43%), Gaps = 100/444 (22%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K ++ ++F++MG FYE F DA + AK+L++ G G P +
Sbjct: 23 RQYLETKKQYQGIILFYRMGDFYETFFEDAVIAAKDLEITLTSREGGKLGRVAMAGIPAK 82
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KG++V + EQ E P Q KG +V R++ V+T GT+TE L
Sbjct: 83 AIDNYLSRLIEKGHKVAICEQMEDPSQ------AKG----LVDRQVVRVITAGTITETNL 132
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT-----SRIILGQVMDDLDCSVL 500
L + + +YL A+ ++++S FG+ +D++T ++ L Q++D+L
Sbjct: 133 LESTKN-NYLAAVIKTSKS-------EFFGLAYIDISTGEFRITKATLDQLIDELSR--- 181
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF--------------W 546
I P+ +L+P ++AI P +++ L E +
Sbjct: 182 ------------ISPSEILAPVKKQAIQAFQIVP--EEVIDLPEVITSNYSCTKRGYSSF 227
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
E +V +IK ++N + ES + + G+ I+ L T G
Sbjct: 228 SQEKSVEKIKEVFNVTSLESFGYPNHTL--------GIMAAGAIVEYLEETQKQGIPEFD 279
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
L + Y+ S Y+ +DA NLE+ + R
Sbjct: 280 TL---IPYMLTS---------------------------YVSMDANTRRNLELVQTVRDN 309
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKA 726
+ G+L ++ T G RLLR W+ +PL + I+ RQ+AV L N LE
Sbjct: 310 NYKGSLLWAIDKTCTNMGLRLLRKWIQQPLKDVNKIKSRQNAVEELLE-NSKLRLEISSL 368
Query: 727 LSRLPDMERLLARLFASSEANGRN 750
L + D+ERL R+ +++ AN R+
Sbjct: 369 LDKTYDIERLATRI-SNNTANARD 391
>gi|325295187|ref|YP_004281701.1| DNA mismatch repair protein mutS [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065635|gb|ADY73642.1| DNA mismatch repair protein mutS [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 842
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 201/485 (41%), Gaps = 107/485 (22%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-----QYMKGEQ-- 377
+ L+ KQ+ E K K+ D ++ F+MG FYE+F DA + AKEL++ + K +
Sbjct: 3 KKLTPALKQYLELKEKYKDSILMFRMGDFYEMFFEDAEIAAKELEIALTSRAFGKSSEKA 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + KL RKGY+V + EQ E P+ KVV R + V+T
Sbjct: 63 PMCGVPHHAVESYIGKLVRKGYKVAICEQLEEPK----------PGKKVVDRGVVRVITP 112
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT E E N D L N F I +++T + V +
Sbjct: 113 GTYFEDE----NEDRFLLSIYPNKNN----------FSIAWTELSTGDLYFATV----NR 154
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
L +LS+ +P EII P + ++ +++P + + E E+K
Sbjct: 155 EDLKSILSKFKPKEIIVPEGF------------SGYKVIKEVLPETLIQEKEKGYFEVK- 201
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
+ +S S++E AL G L
Sbjct: 202 -----------ETNSPEVESKSEK------------------------RALSGLL----- 221
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
F++ET L F P G+ Y+ LD +NLE+ E S +L+ LN
Sbjct: 222 EFIEETQLDFTPKIKPPKRYTGE----KYIYLDPQTQKNLELIEPIAGKLESASLFGVLN 277
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
T G+RLL+ W+ PL + I ER DAV L+ + A E + LS++ D+ERLL
Sbjct: 278 KTKTGMGRRLLKFWILHPLKDKKEIEERLDAVEELKD-SFFVADEILELLSKVYDIERLL 336
Query: 738 ARL---FASSE--ANGRNSNKVVLYEDAAKKQLQEFISALHGC------ELMDQACSSLG 786
+++ AS A+ RNS V+ KK L +F S+L +L D C
Sbjct: 337 SKITSGIASPRDLASFRNSLGVL---PDLKKLLADFKSSLLSQIYKNFDDLYDIYCELER 393
Query: 787 AILEN 791
++EN
Sbjct: 394 VLVEN 398
>gi|15895112|ref|NP_348461.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum ATCC
824]
gi|44888237|sp|Q97I19.1|MUTS_CLOAB RecName: Full=DNA mismatch repair protein MutS
gi|15024812|gb|AAK79801.1|AE007692_9 Mismatch repair protein MutS, ATPase [Clostridium acetobutylicum
ATCC 824]
Length = 869
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 186/433 (42%), Gaps = 92/433 (21%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
++S +Q+ K H D ++FF++G FYE+F DA V ++EL+L ++ P
Sbjct: 2 SISPMMQQYLSIKENHKDCILFFRVGDFYEMFFEDAEVASRELELVLTGKDCGLEKRAPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P +++ KL KGY+V V EQ E P KG +VKR++ V+T GT
Sbjct: 62 CGVPHHAYAIYASKLVSKGYKVAVAEQLEDPSL------AKG----IVKRDVIKVLTPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
T+ L + +Y+M+L D+ +C D++T L + +LD +
Sbjct: 112 YTDSSFLEDTKN-NYIMSLF---------IHDKVSAMCFADISTGEFNLTET--ELDFEI 159
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ +S+ P E++ N+ + LV+ + E +D +Y
Sbjct: 160 ILNEISKFSPKELVLQENL-------------DDKLVD---KIRERFDV---------VY 194
Query: 560 NRIT--------AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
NR + E+L SN A +C G++ +I T +
Sbjct: 195 NRFSNEYFKEHRNENLKAQFSNYAEVNMTEGLKSCANGLIKYIIDTQKTAL--------- 245
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +DE K+E++ ++ +D + NLE+ E + G+
Sbjct: 246 ------THIDE----LQKYEIV-----------DFLSIDINSRRNLELTETLKDKSKKGS 284
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+ TA G R +R W+ RPL + I R DAV + N + + ++ L ++
Sbjct: 285 LLWVLDKTSTAMGGRQIRKWIERPLIDDEKINLRLDAVEEML-TNVSYNEDLKELLKQVY 343
Query: 732 DMERLLARLFASS 744
D+ERL ++ + S
Sbjct: 344 DIERLAGKISSKS 356
>gi|86606675|ref|YP_475438.1| DNA mismatch repair protein MutS [Synechococcus sp. JA-3-3Ab]
gi|123505746|sp|Q2JT35.1|MUTS_SYNJA RecName: Full=DNA mismatch repair protein MutS
gi|86555217|gb|ABD00175.1| DNA mismatch repair protein MutS [Synechococcus sp. JA-3-3Ab]
Length = 882
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 162/628 (25%), Positives = 258/628 (41%), Gaps = 116/628 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHC 380
L+ + + E K ++ ++ +++G FYE+F DA + ++EL+L G P C
Sbjct: 6 LTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQLVSRELELVLTGREAGAIGRVPMC 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P F +L KGY + V +Q E +Q KG +V+RE+ V+T GT+
Sbjct: 66 GIPYHAFDRYAAQLVAKGYALAVCDQMEPADQ------AKG----LVRREVTRVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSR--IILGQVMDDLDCS 498
E ELL A + +YL A+ S + +G+ D++T + G+ + L+
Sbjct: 116 IEEELLQARQN-NYLAAIVRLRGSKQT-----VWGLAYADISTGEFWVCQGEGQEQLEQE 169
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L+ L+P EI+ P TE + P + PL L +
Sbjct: 170 -----LARLQPAEILLP-------TEEGLGLGLMRP-GDPQAPLG---------LPGQYT 207
Query: 559 YNRITAE--SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
Y AE L A N+ + GL L G+ E + + A GG L YL+
Sbjct: 208 YTLRPAEPFELATARENLLQTY----GLRSLEGLGCEGLPLA------IRAAGGLLHYLE 257
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKP--------YMVLDAPALENLEVFENSRSGDS 668
++ K + P G +P Y++LD NLE+ + R G
Sbjct: 258 ET---------QKNLVQPSPQGGHPLLRPPRTYQLTDYLILDTQTRRNLELTQTIREGAF 308
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKAL 727
G+L L+ TA G R LR WL +PL + IR RQD + L + P L
Sbjct: 309 VGSLLWVLDRSRTAMGGRTLRRWLLQPLRDPEQIRLRQDTIQEL--LESPSLRTRLGSLL 366
Query: 728 SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK-KQLQEFIS-----ALHGCELMDQA 781
L D+ERL R+ AS AN R V L K QL E ++ L + +D A
Sbjct: 367 DSLYDLERLANRV-ASGTANPR--ELVALGSSLGKLPQLAELVAEAQTPLLQSLQQVDPA 423
Query: 782 CSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
LG ++ H L P P +++ G I P GVD +
Sbjct: 424 LVDLG--------HRIEHTLLPSP--PPVLT---------------EGGLIRP--GVDAE 456
Query: 842 YDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYEL 900
D ++V++ + + K +R+ G ++ V K Y L + + VP++Y
Sbjct: 457 LDRLRQQVEQDRHWIAQLEKTERERTGIPTLK-VGFNKAFGYYLSISRAKAQQVPKEYIR 515
Query: 901 RSSKKGFFRYWTPNIKKLLGELSQAESE 928
+ + R+ TP +K+ + A++E
Sbjct: 516 KQTLTNEERFITPELKEKEARILTAQTE 543
>gi|337737054|ref|YP_004636501.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
gi|384458562|ref|YP_005670982.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|325509251|gb|ADZ20887.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|336293249|gb|AEI34383.1| DNA mismatch repair protein MutS [Clostridium acetobutylicum DSM
1731]
Length = 869
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 186/433 (42%), Gaps = 92/433 (21%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
++S +Q+ K H D ++FF++G FYE+F DA V ++EL+L ++ P
Sbjct: 2 SISPMMQQYLSIKENHKDCILFFRVGDFYEMFFEDAEVASRELELVLTGKDCGLEKRAPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P +++ KL KGY+V V EQ E P KG +VKR++ V+T GT
Sbjct: 62 CGVPHHAYAIYASKLVSKGYKVAVAEQLEDPSL------AKG----IVKRDVIKVLTPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
T+ L + +Y+M+L D+ +C D++T L + +LD +
Sbjct: 112 YTDSSFLEDTKN-NYIMSLF---------IHDKVSAMCFADISTGEFNLTET--ELDFEI 159
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ +S+ P E++ N+ + LV+ + E +D +Y
Sbjct: 160 ILNEISKFSPKELVLQENL-------------DDKLVD---KIRERFDV---------VY 194
Query: 560 NRIT--------AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
NR + E+L SN A +C G++ +I T +
Sbjct: 195 NRFSNEYFKEHRNENLKAQFSNYAEVNMTEGLKSCANGLIKYIIDTQKTAL--------- 245
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +DE K+E++ ++ +D + NLE+ E + G+
Sbjct: 246 ------THIDE----LQKYEIV-----------DFLSIDINSRRNLELTETLKDKSKKGS 284
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+ TA G R +R W+ RPL + I R DAV + N + + ++ L ++
Sbjct: 285 LLWVLDKTSTAMGGRQIRKWIERPLIDDEKINLRLDAVEEML-TNVSYNEDLKELLKQVY 343
Query: 732 DMERLLARLFASS 744
D+ERL ++ + S
Sbjct: 344 DIERLAGKISSKS 356
>gi|334345821|ref|YP_004554373.1| DNA mismatch repair protein mutS [Sphingobium chlorophenolicum L-1]
gi|334102443|gb|AEG49867.1| DNA mismatch repair protein mutS [Sphingobium chlorophenolicum L-1]
Length = 869
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 129/427 (30%), Positives = 186/427 (43%), Gaps = 80/427 (18%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ-----PHCGFPERN 386
Q+ K++ D ++F++MG F+ELF DA A LD+ +GE P CG P +
Sbjct: 4 QYLALKAEAQDCLLFYRMGDFFELFFEDAKAAAATLDIALTSRGEHGGAPIPMCGVPVHS 63
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L + G+RV + EQTETP Q K +GSK +V R I VT GTLTE LL
Sbjct: 64 AESYLARLIKAGHRVAIAEQTETPAQ----AKARGSK-SLVARAIVRYVTAGTLTEETLL 118
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ D + L+AL + A + +G+ D++T R + + L + L L+
Sbjct: 119 DSRRD-NMLVALAQVGGGEAGE-----YGLAAADISTGRF---ETL-TLRAADLPAELAR 168
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
LRP EI+ P + L DL P S +D + ++ AE+
Sbjct: 169 LRPSEIVLP-----------------DGLELDL-PDSHPFD--------RTAFSSGRAEA 202
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
K VA DG G L+A+GG L YL + + L
Sbjct: 203 ALKRIFGVATL----DGF-------------GQFSRAELAAMGGLLGYLDHA--GKGTLP 243
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
F L P S +M +DA E+LE+ + SG +G+L ++ VT G R
Sbjct: 244 F----LAPPSA---KTSGGHMAIDAATRESLEI-TATMSGTRAGSLLGAVDRTVTGAGAR 295
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEA 746
LL L+ PL + I R V L + + R AL LPD+ R L RL A
Sbjct: 296 LLAQDLSAPLMDQAAIEARLGLVQ-LFHDDSMLRDQLRVALRALPDIGRALGRL-----A 349
Query: 747 NGRNSNK 753
GR S +
Sbjct: 350 MGRGSPR 356
>gi|398884493|ref|ZP_10639426.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM60]
gi|398194302|gb|EJM81378.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM60]
Length = 859
Score = 117 bits (293), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 153/632 (24%), Positives = 263/632 (41%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---SVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLNVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + E+ + +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMAELEAPHIIQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YDS ++ + + + L
Sbjct: 398 KTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDSELDDLQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|355628056|ref|ZP_09049571.1| DNA mismatch repair protein mutS [Clostridium sp. 7_3_54FAA]
gi|354819949|gb|EHF04381.1| DNA mismatch repair protein mutS [Clostridium sp. 7_3_54FAA]
Length = 886
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 191/423 (45%), Gaps = 70/423 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ LS Q+ E K ++ D ++F+++G FYE+F DA ++EL++ ++
Sbjct: 1 MAQLSPMMTQYLETKKQYPDCILFYRLGDFYEMFFEDALTASRELEITLTGKDCGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + KL +KGY+V + EQ E P + KG +VKRE+ VVT
Sbjct: 61 PMCGVPYHALEGYLSKLVQKGYKVAIGEQVEDP------KTAKG----LVKREVIRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+T + L + + +YLM + TD FGI V DV+T ++ +V + +
Sbjct: 111 GTITNSQALEESKN-NYLMGIV---------YTDGIFGISVADVSTGDYLVTEVKSERN- 159
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
L + + P EII + L++ + +++DL + F+ E
Sbjct: 160 --LIDEIYKFSPSEIICNEAFYMSGIDLDDLKNRLHAVISDLD--NRFFSDE-------- 207
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
L + +V N EG GL S ++G+ A+ L+ +K
Sbjct: 208 -----FCRKLLRDHFHVEN--LEGLGL-----------SDYETGTIAAGAVLQYLYETQK 249
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ L E L R + +M+LD NLE+ E R GTL L+
Sbjct: 250 NSL-EHLTRITPY-----------TTGQFMMLDTSTRRNLELIETLREKQKRGTLLWVLD 297
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
TA G R+LR+++ +PL + I +RQ+A+ L +N E + L+ + D+ERLL
Sbjct: 298 KTKTAMGARMLRSFVEQPLIHKEEILKRQNAIEEL-NMNYISREEICEYLNPIYDLERLL 356
Query: 738 ARL 740
R+
Sbjct: 357 GRI 359
>gi|383501920|ref|YP_005415279.1| DNA mismatch repair protein MutS [Rickettsia australis str.
Cutlack]
gi|378932931|gb|AFC71436.1| DNA mismatch repair protein MutS [Rickettsia australis str.
Cutlack]
Length = 886
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 187/430 (43%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCG 381
++ +Q+ + K H+D ++ F+MG FYE+F DA + + L + K E CG
Sbjct: 16 TKMMQQYLDIKFAHLDCLLLFRMGDFYEMFYDDAILASNVLGIALTKRGKNGEAEIAMCG 75
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+
Sbjct: 76 VPYHALEHYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTII 131
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+ A+ + +YL +L N+ AS +C VD++TS I + V + + +
Sbjct: 132 EENLI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIFVVNVPE----AEI 178
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+P EI+ N+ S +I + L + Y
Sbjct: 179 LNELARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQ 216
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ ++NK + + + D + GI G+ S + +G L YL
Sbjct: 217 VDSFFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICVIGSILEYL----- 260
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ NS+ G S+ +L + +NH V
Sbjct: 261 --SLTQKQNIPHLPIPRIINF--HSYMTIDFSTRHNLEIVTNSQGG-SNRSLLSTINHTV 315
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L + D+ER L R+
Sbjct: 316 TKQGGRLLYNFLSSPLTNIVKINHRLNITEFFYS-NLEIVQRIRELLKKTSDIERCLTRI 374
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 375 -TMNRSSGRD 383
>gi|323691987|ref|ZP_08106235.1| DNA mismatch repair protein MutS [Clostridium symbiosum WAL-14673]
gi|323503910|gb|EGB19724.1| DNA mismatch repair protein MutS [Clostridium symbiosum WAL-14673]
Length = 880
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 189/414 (45%), Gaps = 70/414 (16%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPERN 386
Q+ E K ++ D ++F+++G FYE+F DA ++EL++ ++ P CG P
Sbjct: 4 QYLETKKQYPDCILFYRLGDFYEMFFEDALTASRELEITLTGKDCGLEERAPMCGVPYHA 63
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ KL +KGY+V + EQ E P + KG +VKRE+ VVT GT+T + L
Sbjct: 64 LEGYLSKLVQKGYKVAIGEQVEDP------KTAKG----LVKREVIRVVTPGTITNSQAL 113
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ + +YLM + TD FGI V DV+T ++ +V + + L + +
Sbjct: 114 EESKN-NYLMGIV---------YTDGIFGISVADVSTGDYLVTEVKSERN---LIDEIYK 160
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
P EII + L++ + +++DL + F+ E K + + E+
Sbjct: 161 FSPSEIICNEAFYMSGIDLDDLKNRLHAVISDLD--NRFFSDEFCR---KLLRDHFHVEN 215
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
L EG GL S ++G+ A+ L+ +K+ LD L R
Sbjct: 216 L------------EGLGL-----------SDYETGTIAAGAVLQYLYETQKNSLDH-LTR 251
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ +M+LD NLE+ E R GTL L+ TA G R
Sbjct: 252 ITPY-----------TTGQFMMLDTSTRRNLELIETLREKQKRGTLLWVLDKTKTAMGAR 300
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
+LR+++ +PL + I +RQ+A+ L +N E + L+ + D+ERLL R+
Sbjct: 301 MLRSFVEQPLIHKEEILKRQNAIEEL-NMNYISREEICEYLNPIYDLERLLGRI 353
>gi|358067399|ref|ZP_09153878.1| DNA mismatch repair protein MutS [Johnsonella ignava ATCC 51276]
gi|356694315|gb|EHI55977.1| DNA mismatch repair protein MutS [Johnsonella ignava ATCC 51276]
Length = 879
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 188/419 (44%), Gaps = 78/419 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
KQ+ + K ++ + ++F+++G FYE+F DA + +KEL+L ++ P CG P
Sbjct: 9 KQYLKTKEEYPECILFYRLGDFYEMFFEDAKLASKELELTLTGKDCGLEERAPMCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + ++KL KGY+V + EQ E P + KG +VKRE+ +VT GT+T +
Sbjct: 69 SAEVYLDKLVLKGYKVAIAEQVEDP------KLAKG----LVKREVVRIVTPGTITSSNV 118
Query: 446 LSANPDASYLMALTE-SNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
L + + +YL++++ SN FGI VD++T + Q L +
Sbjct: 119 LKDDKN-NYLLSISYLSNH----------FGIAAVDISTGDFFVTQAD---SVHELYDEI 164
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
S P E+I E +L++ +S D E +NI +R
Sbjct: 165 SRYSPSEVICNHAFKISTAELDVLKNQYG------FGISFLDDQYYNEKECRNIISR--- 215
Query: 565 ESLNKADSNVANSQAEGDGLTCLP-GILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
N+ S E G +P GI+S G L YL ++ +
Sbjct: 216 ------QFNI--SAGERPGFFAMPEGIISA---------------GAALRYLYET-QKSS 251
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
C YM++DA + NLE+FE R G+L ++ TA
Sbjct: 252 CPNIQSINYYSCG--------EYMIMDAGSKRNLELFETMREKKKYGSLLWVIDKTRTAM 303
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLARL 740
G RLLR+++ +PL N+ I +R ++VA R +++ E + LS + D+ERL+ R+
Sbjct: 304 GARLLRSYIEQPLINTDAIEKRHESVAEFLDRYIDRQ---ELGEYLSSVYDLERLIGRI 359
>gi|358373072|dbj|GAA89672.1| DNA mismatch repair protein Msh3 [Aspergillus kawachii IFO 4308]
Length = 1117
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 154/678 (22%), Positives = 280/678 (41%), Gaps = 91/678 (13%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ +KQ + K KHMD V+ ++G + F DA V AKEL + + G E P
Sbjct: 206 LTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVCIPGKLRFDEHPSEA 265
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L G++V VV Q ET + +++ R++
Sbjct: 266 HLDRFASASIPVHRLHVHVKRLVAAGHKVGVVRQIETAA----LKAAGDNRNAPFVRKLT 321
Query: 433 AVVTKGTLT------EGELLSAN----PDASYLMALTESNQSPASQSTDRCFGICVVDVA 482
+ TKGT EG + +A+ P YL+ +TE+N GI V A
Sbjct: 322 NLYTKGTYIDDAEGLEGPMPAASGGASPATGYLLCITETNAKGWGNDEKVQVGIVAVQPA 381
Query: 483 TSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN----- 537
T I+ D S + L + P E++ LS TE+ +++H +N
Sbjct: 382 TGDIVYDDFEDGFMRSEIETRLLHIAPCELLIVGE-LSKATEK-LVQHLSGSKLNVFGDK 439
Query: 538 ---DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSEL 594
+ VP S+ AE+ ++ +++ K + A A+ L L ++
Sbjct: 440 TRVERVPKSKTAAAES--------HSHVSSFYAGKMKTASAADDAQASSL------LQKV 485
Query: 595 ISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPAL 654
++ + QV L + ++K+ L E + K+ F + + +M+L+ L
Sbjct: 486 LNLPE---QVTICLSSMIEHMKEYGL-EYVFELTKY-------FQHFSSRSHMLLNGNTL 534
Query: 655 ENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG 714
+LE+++N + G+L+ L+ T FG+R+LR W+ RPL + + ER +AV L+
Sbjct: 535 MSLEIYQNQTDHTTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEELKN 594
Query: 715 VNQPFALEFRKAL--SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+ +E K L D+E+ L R++ K E ++ L
Sbjct: 595 PEKTVMVERLKGLLGKVKSDLEKSLIRIY------------------YGKCTRPELLTVL 636
Query: 773 HGCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGR 831
+++ Q S + + + S ++ +T LP I+ + F D + A + +
Sbjct: 637 QTMQMIAQEFSDVKSPADTGFASAAINEAIT---CLPTILEDVIAFLDKINMHAAKSDDK 693
Query: 832 IIPHGGVDMDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ D + +K + +E L +HL + LG ++ Y ++ YL+EV S
Sbjct: 694 YAFFRETEETEDISDQKLGIASVEHELEEHLSVAGQKLGKKTVEYKSVAGIDYLIEVENS 753
Query: 890 LRG--SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
VP + S K R+ TP + +L+ + Q + +A L+
Sbjct: 754 SASIKRVPASWVKVSGTKKVSRFHTPEVIQLMRQRDQHKEALAAACDKAFISLLADIATK 813
Query: 948 HNKWRQMVAATAGLTLIL 965
+ +R V A A L ++
Sbjct: 814 YQPFRDSVQALATLDCLI 831
>gi|421489405|ref|ZP_15936787.1| DNA mismatch repair protein MutS [Streptococcus oralis SK304]
gi|400366037|gb|EJP19079.1| DNA mismatch repair protein MutS [Streptococcus oralis SK304]
Length = 844
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 146/659 (22%), Positives = 273/659 (41%), Gaps = 143/659 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K ++ D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAINAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S+ PD+ ++L+A+ FG+ +D+ T + + LD +
Sbjct: 116 VD----SSKPDSQNNFLVAIDRDGSQ---------FGLAYMDLVTGDFYVTGL---LDFT 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + L+ E++ ++ E E IL N +++
Sbjct: 160 LVCGEIRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS--------------------- 196
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y + E L+ DS +A + +A L Y+ ++
Sbjct: 197 YEKEVFEDLHLLDSRLAAVEQ--------------------------AASSKLLQYVHRT 230
Query: 619 FLDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ E L ++E+ K ++ +D +L++ EN+RSG G+L+ L
Sbjct: 231 QMRELNHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLL 279
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRL 730
+ TA G RLLR+W+ RPL + I +RQD V Q F F + +L +
Sbjct: 280 DETKTAMGMRLLRSWIHRPLIDKKRIVQRQDVV-------QVFLDHFFERSDLTDSLKGV 332
Query: 731 PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILE 790
D+ERL +R+ + G+ + K +L QL +S + + AILE
Sbjct: 333 YDIERLASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILE 370
Query: 791 NTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKV 849
E L +++ +P + S++ A + +I GG + +D K
Sbjct: 371 GMEQPALGYLIAQLDAIPELESLIS-------AAIAPEAPHVITEGGIIRTGFDETLDKY 423
Query: 850 KEIEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKK 905
+ + T + E +R+ G +++ KD Y V S G+VP + +++ K
Sbjct: 424 RRVLREGTSWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLK 483
Query: 906 GFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + + I R+ + ++ + + + A + ++
Sbjct: 484 NSERFGTEELARIEGDMLEAREKSANLEYEIFMRIREEVSKYIQRLQALAQGIATVDVL 542
>gi|388543737|ref|ZP_10147027.1| DNA mismatch repair protein MutS [Pseudomonas sp. M47T1]
gi|388278294|gb|EIK97866.1| DNA mismatch repair protein MutS [Pseudomonas sp. M47T1]
Length = 855
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 154/633 (24%), Positives = 254/633 (40%), Gaps = 126/633 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPYH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 AAEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 122 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---AVLEIKGWENLLAELE 168
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R R R P WD E K++ +
Sbjct: 169 RINPVELLIPDDWPQGLPAEKRRGSRR--RAP-----------WDFERDTAH-KSLCQQF 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G CL G E T L L+ LD+
Sbjct: 215 STQDLKGFGCENLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERLDD 262
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
T+ VLD + NLE + + +G TL + ++ C TA
Sbjct: 263 TV-----------------------VLDGASRRNLE-LDTNLAGGRDNTLQSVIDRCQTA 298
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFA 742
G RLL WL RPL + +++ RQ +++ L + +L+ L + D+ER+LAR+
Sbjct: 299 MGSRLLTRWLNRPLRDLKVLQARQSSISCLLDGYRFESLQ--PQLKEIGDIERILARI-- 354
Query: 743 SSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT 802
RN+ D A+ L++ ++AL L + + E+ L + T
Sbjct: 355 ----GLRNARP----RDLAR--LRDALAAL----------PELQVAMSDLEAPHLALLAT 394
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL- 860
P + +L +N +I GGV YDS ++ + + + L
Sbjct: 395 IAGTYPELADLLSK-------AIVDNPPAVIRDGGVLKTGYDSELDELLALSENAGQFLI 447
Query: 861 -----KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
++ R L + + Y + Y +E+P P DY R + KG R+ TP +
Sbjct: 448 DLEAREKARTGLANLKVGYNRVHG--YFIELPSKQAEQAPADYIRRQTLKGAERFITPEL 505
Query: 916 K----KLLGELSQAESEKESALKSILQRLIGQF 944
K K L S+A + ++ ++L+ LIG
Sbjct: 506 KAFEDKALSAKSRALAREKMLYDALLENLIGHL 538
>gi|222478558|ref|YP_002564795.1| DNA mismatch repair protein MutS [Halorubrum lacusprofundi ATCC
49239]
gi|222451460|gb|ACM55725.1| DNA mismatch repair protein MutS [Halorubrum lacusprofundi ATCC
49239]
Length = 931
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 120/423 (28%), Positives = 177/423 (41%), Gaps = 86/423 (20%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQPHCGFPERNF 387
++ + K++ ++ + G FYE F DA + A ELDL + P G P
Sbjct: 8 EFLDLKAETDADILAMQCGDFYEFFADDAELVADELDLTVSQKSSHGSSYPMAGVPLSEL 67
Query: 388 SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLS 447
+ V+ L +GYRV V +Q ET E G REI VVT GTL E +
Sbjct: 68 TPYVKALVERGYRVAVADQYET---------EDGH-----AREITRVVTPGTLLE----T 109
Query: 448 ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSEL 507
A+ DA YL A+ D +G+ + DV T R ++ +V D+ D L L
Sbjct: 110 ADDDARYLAAIVREG-----DDADGPYGLALADVTTGRFLVTEVDDEGD---LRAELYRF 161
Query: 508 RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTV-----LEIKNIYNRI 562
P E++ + + + +R DL +DAE ++ + R
Sbjct: 162 DPAEVLPGPRVRNDDRLLGAVR-------EDLSGSVSVFDAEAFAPGRAKHAVREQFGRE 214
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
TA+S+ GI SEL L A G L Y++++
Sbjct: 215 TADSV---------------------GIDSEL---------ALRAAGAVLGYVEETGAGV 244
Query: 623 TLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
A L G GD ++ +DA NLE+ E R GD+ G+L+ ++H VTA
Sbjct: 245 ----LASITRLTAYGDGD-----HVAVDATTQRNLELTETMR-GDADGSLFETVDHTVTA 294
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLF 741
G RLLR W+ RP + + R DAV L + A + R+ L D+ERL AR
Sbjct: 295 AGGRLLREWITRPRRDREELNRRLDAVEAL--ASAALARDRLRETLGDAYDLERLAARAT 352
Query: 742 ASS 744
+ S
Sbjct: 353 SGS 355
>gi|323486939|ref|ZP_08092254.1| hypothetical protein HMPREF9474_04005 [Clostridium symbiosum
WAL-14163]
gi|323399711|gb|EGA92094.1| hypothetical protein HMPREF9474_04005 [Clostridium symbiosum
WAL-14163]
Length = 886
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 191/423 (45%), Gaps = 70/423 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ LS Q+ E K ++ D ++F+++G FYE+F DA ++EL++ ++
Sbjct: 1 MAQLSPMMTQYLETKKQYPDCILFYRLGDFYEMFFEDALTASRELEITLTGKDCGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + KL +KGY+V + EQ E P + KG +VKRE+ VVT
Sbjct: 61 PMCGVPYHALEGYLSKLVQKGYKVAIGEQVEDP------KTAKG----LVKREVIRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+T + L + + +YLM + TD FGI V DV+T ++ +V + +
Sbjct: 111 GTITNSQALEESKN-NYLMGIV---------YTDGIFGISVADVSTGDYLVTEVKSERN- 159
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
L + + P EII + L++ + +++DL + F+ E
Sbjct: 160 --LIDEIYKFSPSEIICNEAFYMSGIDLDDLKNRLHAVISDLD--NRFFSDE-------- 207
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
L + +V N EG GL S ++G+ A+ L+ +K
Sbjct: 208 -----FCRKLLRDHFHVEN--LEGLGL-----------SDYETGTIAAGAVLQYLYETQK 249
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ L E L R + +M+LD NLE+ E R GTL L+
Sbjct: 250 NSL-EHLTRITPY-----------TTGQFMMLDTSTRRNLELIETLREKQKRGTLLWVLD 297
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLL 737
TA G R+LR+++ +PL + I +RQ+A+ L +N E + L+ + D+ERLL
Sbjct: 298 KTKTAMGARMLRSFVEQPLIHKEEILKRQNAIEEL-NMNYISREEICEYLNPIYDLERLL 356
Query: 738 ARL 740
R+
Sbjct: 357 GRI 359
>gi|268591354|ref|ZP_06125575.1| DNA mismatch repair protein MutS [Providencia rettgeri DSM 1131]
gi|291313331|gb|EFE53784.1| DNA mismatch repair protein MutS [Providencia rettgeri DSM 1131]
Length = 855
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 180/421 (42%), Gaps = 92/421 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K++H D ++F++MG FYELF DA ++ LD+ K Q P G P
Sbjct: 15 QQYLKLKAQHSDILLFYRMGDFYELFFDDAKKASQLLDISLTKRGQSAGQPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AAEGYLAKLVQMGESVAICEQIGDPA------TSKGP----VERQVVRIVTPGTITDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L+ D + L A+ + Q FG +D+ + R I+ ++ D+ L L
Sbjct: 125 LNERQD-NLLAAVWQDQQG---------FGFATLDITSGRFIISEIADE---EALQAELQ 171
Query: 506 ELRPVEIIKPANMLSPETERAILRHT----RNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
RP E++ P + S A++ H R PL W+ E
Sbjct: 172 RSRPAELLYPEDFAS----MALIEHNKGLRRRPL----------WEYE------------ 205
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFL 620
L+ A + D LI G + + L A G L Y+K +
Sbjct: 206 -----LDTAKQQLGLQFGTKD-----------LIGFGVEDAHKALRAAGCLLQYVKDT-- 247
Query: 621 DETLLRFAKFELLPCSGFGDMAKK-PYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ LP M K+ ++LDA NLE+ +N +G + TL A L+ C
Sbjct: 248 --------QRTSLPHIRSIVMEKQNDNVILDAATRRNLEITQN-LAGGTENTLAAILDMC 298
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G R+L+ WL PL N ++ RQ A++ L Q E + L ++ D+ER+LAR
Sbjct: 299 VTPMGSRMLKRWLHTPLRNIQVLNNRQQAISAL----QECGFELQPFLRQIGDLERVLAR 354
Query: 740 L 740
L
Sbjct: 355 L 355
>gi|46125469|ref|XP_387288.1| hypothetical protein FG07112.1 [Gibberella zeae PH-1]
Length = 1105
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 159/671 (23%), Positives = 271/671 (40%), Gaps = 85/671 (12%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ E K KHMD V+ ++G + F DA + AKEL + + G E P
Sbjct: 202 LTPMEIQFLEIKRKHMDTVLIVEVGYKFRFFGDDARIAAKELSIVCIPGKMRYDEHPSEA 261
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++ ++L G++V VV Q ET +K +++ R++
Sbjct: 262 HIDRFASASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNTPFVRKLT 317
Query: 433 AVVTKGTLTE--GEL----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
+ TKGT + GEL S P YL+ +TES + GI V AT I
Sbjct: 318 NLYTKGTYIDENGELDQSGGSGAPSGGYLLCITESKAKGSGTDEKVNVGIIAVQPATGDI 377
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW 546
I D S + L + P E + + L+ T++ +++H N S
Sbjct: 378 IYDHFEDGFMRSEIETRLLHISPCEFLIVGD-LTKGTDK-LVQHLSGSSTNVFGDRSRVE 435
Query: 547 DAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLS 606
+ Y+ +T +K N + A +L +++ + + LS
Sbjct: 436 RVPKEKTMAADAYSHVTQFYADKLKDNAQDETA--------AALLGKVLKLPEPVTICLS 487
Query: 607 ALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSG 666
A+ + +L++ L E + K+ F + + +M+++ LE+LEV+ NS
Sbjct: 488 AM---INHLQEYGL-EHIFDLTKY-------FQSFSTRSHMLINGTTLESLEVYRNSTDH 536
Query: 667 DSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFA-LEF 723
G+L+ L+ +T G+RLLR W+ RPL + L+ R +AV L + P + LE
Sbjct: 537 SEKGSLFWALDKTLTRPGQRLLRKWVGRPLLDQELLEARLNAVEELLNKQSTAPVSQLES 596
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-------CE 776
A ++ D+ER L R++ G+ + +L A +++ + S +
Sbjct: 597 LLANTK-TDLERSLIRIY-----YGKCTRPELLSVLQALQRVASYYSTIKAPSDAPFSSP 650
Query: 777 LMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH--FKDAFDWVEANNSGRIIP 834
L+ +A SL IL+ S L I L A K+ F+D F + + I
Sbjct: 651 LLSEAICSLPQILDTVVS-YLERI-----NLVAARKDDKYGFFRDEFQTEDMQDHQLGIA 704
Query: 835 HGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSV 894
H +E L H + + + YVT+ +L+EVP + V
Sbjct: 705 H----------------VEHELDGHRAVAAEKIKKKMVDYVTVAGIEFLIEVPNADIKHV 748
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P + S K R+ TP + + + E Q +A + L+ + R
Sbjct: 749 PASWAKISGTKKLSRFHTPEVLRFITERDQHREALAAACDKAFKDLLASIASDYQPLRDA 808
Query: 955 VAATAGLTLIL 965
V+A A L L
Sbjct: 809 VSALATLDCAL 819
>gi|398998541|ref|ZP_10701314.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM21]
gi|398120246|gb|EJM09913.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM21]
Length = 859
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 150/632 (23%), Positives = 256/632 (40%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILAR-- 357
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
+ +A + L AL + A + L A HI+
Sbjct: 358 -------------IGLRNARPRDLARLRDALGALPELQVAMTELEA----------PHII 394
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
K + + + +N +I GGV YDS ++ + + + L
Sbjct: 395 QLAK----VTNTYPELAALLEKAIIDNPPAVIRDGGVLKTGYDSELDDLQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|335032075|ref|ZP_08525484.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK52 =
DSM 20563]
gi|333767941|gb|EGL45156.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK52 =
DSM 20563]
Length = 855
Score = 117 bits (292), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 157/657 (23%), Positives = 266/657 (40%), Gaps = 148/657 (22%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 8 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDATNAAQILEIALTSRNKNSENPIPMA 67
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 68 GVPYHSVQQYIDVLIEAGYKVAIAEQMEDP------KKAVG----VVKREVVQVITPGTV 117
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A +G+ +DV T QV D +++
Sbjct: 118 VD----SSKPD-------SQNNFLVALDKLSGIYGLAYMDVGTGEF---QVTSLSDFNIV 163
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE ER +L + + T+L
Sbjct: 164 CGEIRNLRAREVVLGYEL--PEMERQVL------------------ETQMTLL------- 196
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L++ ++ + Q G L+ L ++ G L Y+ K+ L
Sbjct: 197 ------LSQVETTFDDVQLLGKDLSPLEHQVA----------------GKLLQYVHKTQL 234
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L + +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 235 RELSHLKQVHHYEI-----------KDFLQMDYSTMASLDLTENARTGKKHGSLYWLMDD 283
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ RPL + I +RQD V Q F F + L + D
Sbjct: 284 TKTAMGTRLLRAWIQRPLIDKERIVKRQDVV-------QVFLDHFFERSDLSDTLKGVYD 336
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE---LMDQACS-----S 784
+ERL +R+ + G+ + K +L A + + L G + L D
Sbjct: 337 IERLASRV-----SFGKTNPKDLLQLAATLSHVPQIKGILKGIDSPVLEDLIAKLDEIPE 391
Query: 785 LGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDS 844
L +++++ S +++T G + K FD E + R++ G D
Sbjct: 392 LASLIQSAISPDASNVITEGNII----------KTGFD--ETLDKYRVVMRDGTSWIADI 439
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSK 904
+ KE EAS +LK I Y KD Y V S VP + +++
Sbjct: 440 ---EAKEREASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATL 484
Query: 905 KGFFRYWTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
K R+ T + ++ GE+ +A + + I R+ G++ + Q +A
Sbjct: 485 KNSERFGTEELARIEGEMLEAREKSANLEYEIFMRIREEAGKYIKRLQSLAQTLATV 541
>gi|417918056|ref|ZP_12561609.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
SK236]
gi|342829047|gb|EGU63408.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
SK236]
Length = 857
Score = 117 bits (292), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 155/657 (23%), Positives = 273/657 (41%), Gaps = 133/657 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S +G+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGNE---------YGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D S++C + LR E++ + PE E + N L
Sbjct: 157 DFSMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDQLSEL-----EKKTAGKLLQYVYQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + IRERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIRERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD + + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--DQLDQYRLVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLSHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A + ++
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVL 542
>gi|384260705|ref|YP_005415891.1| DNA mismatch repair protein mutS [Rhodospirillum photometricum DSM
122]
gi|378401805|emb|CCG06921.1| DNA mismatch repair protein mutS [Rhodospirillum photometricum DSM
122]
Length = 969
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 188/414 (45%), Gaps = 68/414 (16%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERN 386
Q+ K+++ D ++F++MG FYE+F DA ++ LD+ K + P CG P +
Sbjct: 88 QYLSLKAQNPDGLLFYRMGDFYEMFFDDAVAASRTLDIALTKRGKHQGADIPMCGVPVHS 147
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L R G++V++ EQ E P + R+++G+K V + + VT GTLTE LL
Sbjct: 148 HESYLARLIRAGHKVVICEQIEDPAEA---RRQRGAKAVVAR-AVVRTVTPGTLTEDTLL 203
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A +YL AL ++ G+ VDV+T LG LD + L L+
Sbjct: 204 DAR-RPNYLAALVRQRET---------LGLAWVDVSTG--ALGA--QALDVATLGPALAR 249
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L P E+I P + LS + A + P+V+ L P S F D+E + ++
Sbjct: 250 LAPGELILP-DTLSADPAFAEALVSVKPVVSPL-PASRF-DSENARKRLHEVFA------ 300
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+ L + GD G ++ALG + Y+ TL +
Sbjct: 301 ------------------------VGALDAFGDFGRAEIAALGAVIDYV-------TLTQ 329
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
+ L S + + M +D NLE+FE + +G G+L A L+ VT G R
Sbjct: 330 AGRLPRL--SPPRRLDESAVMAIDPATRRNLELFE-TLTGGRKGSLLATLDRTVTGPGAR 386
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
LL LA PL + ++ +R D VA G + E R L+ PD+ R L+RL
Sbjct: 387 LLAERLAAPLTDPEVLNQRLDGVALFVGATEART-ELRGLLTGCPDIARALSRL 439
>gi|410667733|ref|YP_006920104.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105480|gb|AFV11605.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 881
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 182/416 (43%), Gaps = 71/416 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERN 386
Q+ K+K+ D ++FF++G FYELF DA +KEL++ + P CG P
Sbjct: 10 QYQSIKNKYPDCLLFFRLGDFYELFGEDAIKASKELEIVLTSRGVSKDKKVPMCGVPYHA 69
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+++L KGY++ + EQ LE + KG +VKR++ V+T GT+ E L
Sbjct: 70 VDGYLKRLLEKGYKIAICEQ------LEEAKPGKG----IVKRDVVRVITPGTVLEPAYL 119
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ +Y+++L +S G D++T + + Q + L LLS
Sbjct: 120 EQGEN-NYIISLYRKKES---------IGCAWSDISTGKFQMTQFSETAAAEYLRDLLSR 169
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L+P E I ++ + PL+ D +W+++ NI R+ E
Sbjct: 170 LQPAECIIRSDQAA----------FFEPLMED------YWESKGL-----NI-TRLNKEI 207
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+ + Q G L GI + TG L + L Y+ ++
Sbjct: 208 NGQVAWELVTRQF---GQENLIGIDRDAFETG------LVSAANLLSYIMET-------- 250
Query: 627 FAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKR 686
K LP K M +DA N+E+F R G G+L+ L+ +T G R
Sbjct: 251 -QKTSTLPFKDLSVYTPKSCMYIDAMTRRNMELFRTLRDGKREGSLFWALDRTLTGMGTR 309
Query: 687 LLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARL 740
LLR WL PL + I RQ+AV L G F L E ++ L ++ D+ER+++R+
Sbjct: 310 LLRYWLESPLLDIEEIEARQEAVEELAG---SFFLRNELQECLKKIYDLERIISRV 362
>gi|154254030|ref|YP_001414854.1| DNA mismatch repair protein MutS [Parvibaculum lavamentivorans
DS-1]
gi|189083166|sp|A7HZ64.1|MUTS_PARL1 RecName: Full=DNA mismatch repair protein MutS
gi|154157980|gb|ABS65197.1| DNA mismatch repair protein MutS [Parvibaculum lavamentivorans
DS-1]
Length = 908
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 190/441 (43%), Gaps = 75/441 (17%)
Query: 313 DPRTLYLP------PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAK 366
+P T + P P + + Q+ E K++ + ++F++MG FYELF DA +
Sbjct: 3 EPATSFTPEIPSALPSIPADATPMMAQYLEIKARWPEALLFYRMGDFYELFFEDAVAASA 62
Query: 367 ELDLQYMK-----GEQ-PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEK 420
LD+ K GE P CG P + +++L RKG++V V EQ E P + K++
Sbjct: 63 ALDIALTKRGKHLGEDIPMCGVPVHSHDAYLQRLIRKGFKVAVCEQVEDPAE----AKKR 118
Query: 421 GSKDKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVD 480
G+K VV R + +VT GTLTE LL A +YL AL+ + + FG+ VD
Sbjct: 119 GAK-SVVARAVARLVTPGTLTEDTLLDARAH-NYLAALSRTG-------AEAGFGLAWVD 169
Query: 481 VATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLV 540
V+T + L L L+ L P E++ P + E A+L + L +
Sbjct: 170 VSTGDF----AVTSLAPVALGAELARLSPGELLLPETLDEDEDLAALLAQSGAALTR--L 223
Query: 541 PLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS 600
P F + + + + + +L D A ++AE
Sbjct: 224 PAIRFESGQAE----RRLKSHLGVSAL---DGFGAFARAE-------------------- 256
Query: 601 GSQVLSALGGTLFYLKKSFLDETLLRFAKF-ELLPCSGFGDMAKKPYMVLDAPALENLEV 659
L A+G L Y++ L + + L+P +A M +DA NLE+
Sbjct: 257 ----LGAMGALLDYVE-------LTQVGRMPALMPPR---RVAATDTMAIDAATRANLEL 302
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
+ G+++G+L A ++ VT G R L + LA PL + + R DAV
Sbjct: 303 V-RTLQGETAGSLLATMDRTVTGAGARELASRLAAPLTDPAAVNRRLDAVEWFHDARDMR 361
Query: 720 ALEFRKALSRLPDMERLLARL 740
A R L PD+ R L+RL
Sbjct: 362 A-RLRAGLKSAPDIARALSRL 381
>gi|418965200|ref|ZP_13516982.1| DNA mismatch repair protein MutS [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343315|gb|EID21503.1| DNA mismatch repair protein MutS [Streptococcus constellatus subsp.
constellatus SK53]
Length = 852
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 146/633 (23%), Positives = 259/633 (40%), Gaps = 139/633 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT+
Sbjct: 66 GVPYHSVQQYIDVLIESGYKVAIAEQVEDP------KKAVG----VVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A + +G+ +D+ T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLENLYGLAYMDLVTGEF---QVTSLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE+E +L + N L
Sbjct: 162 CGEIRNLRAREVVLGYEL--PESEHQVLANQMNLL------------------------- 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L++ + + Q GD L+ L ++ G L Y+ ++ L
Sbjct: 195 ------LSQVGTAFEDVQLLGDELSRLEHQVA----------------GKLLEYVHQTQL 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L R +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 233 RELSHLKRVHHYEI-----------KDFLQMDYATMASLDLTENARTGKKHGSLYWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ +PL + I +RQD V Q F F + +L + D
Sbjct: 282 TKTAMGTRLLRRWIQQPLIDKERILKRQDVV-------QVFLDYFFERSDLADSLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R+ + G+ + K +L A + + L G + LG ++EN
Sbjct: 335 IERLASRV-----SFGKTNPKDLLQLAATLSNVPQIKGILQGID-----HPVLGQLIENL 384
Query: 793 E-----SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ + + ++P P +++ + FD E + R++ G
Sbjct: 385 DDIPELANLIQSAISPDA--PNVITEGNIIQTGFD--EILDKYRVVMRDG--------TS 432
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ +IEA ++R G ++ KD Y V S VP + +++ K
Sbjct: 433 WIADIEA-------KERAASGINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
R+ T + ++ GE+ +A + + I R+
Sbjct: 486 ERFGTEELARIEGEMLEAREKSANLEYEIFMRI 518
>gi|251796615|ref|YP_003011346.1| DNA mismatch repair protein MutS [Paenibacillus sp. JDR-2]
gi|247544241|gb|ACT01260.1| DNA mismatch repair protein MutS [Paenibacillus sp. JDR-2]
Length = 900
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 196/466 (42%), Gaps = 102/466 (21%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ K + D +FF++G FYE+F DA ++EL++ M + P CG P
Sbjct: 9 QQYLAIKEQAKDAFLFFRLGDFYEMFFDDAINASRELEITLTGREGGMSEKIPMCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L KG++V V EQ E P + VV+REI V+T GT+ E +
Sbjct: 69 SAENYIARLVEKGFKVAVCEQVEDP----------SAAKGVVRREIVRVITPGTVMESKS 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A+ ++++ S S ST G+ D++T + + ++D L ++
Sbjct: 119 L-ADKSNNFIV-------SVGSVSTA-AIGMAACDLSTGELYATSLAFNIDT--LIDEIN 167
Query: 506 ELRPVEIIKPANMLSPETERA-----ILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+P EI+ N+L+ E+A +L +R P+ D L E ++A + LE+ N
Sbjct: 168 VYQPAEIVGDENLLAQLKEQAVWNRPVLLTSRKPMAED--KLREQFEA--SQLEVLN--- 220
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
++ + +S L G +L
Sbjct: 221 --------------------------------------ETRYRAVSLLTG--------YL 234
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
DET K L YM+LD NLE+ E R G+L L+
Sbjct: 235 DET----QKRSLGHVRTIRAYEPNQYMILDHYTRRNLELTETVRDRSKKGSLLWLLDRTQ 290
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T+ G RLLR W+ +PL N I ER +AV L N + R L+ + D+ERL+ R+
Sbjct: 291 TSMGARLLRRWIDKPLLNRSKIEERYEAVDALYR-NLIARDDIRSELNHVYDLERLVGRV 349
Query: 741 FASSEANGRNSNK-----------VVLYEDAAKKQLQEFISALHGC 775
A ANGR+ N V L A ++L++ + L C
Sbjct: 350 -AFGSANGRDMNALRSSIRRTPQLVELARQAGSERLRQLVDGLDDC 394
>gi|452995322|emb|CCQ93092.1| DNA mismatch repair protein MutS [Clostridium ultunense Esp]
Length = 871
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 184/427 (43%), Gaps = 73/427 (17%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ NL+ KQ+ K + D ++FF++G FYE+F DA + +KEL++ +
Sbjct: 1 MDNLTPMMKQYVTIKENYQDTILFFRLGDFYEMFFDDALIASKELEIALTHRDAGGNEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + KL +KGY+V + EQ E P KG +V+R++ V+T
Sbjct: 61 PMCGVPHHVADVYISKLVKKGYKVAICEQLEDPAL------AKG----LVERDVVRVITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ + +L + +YL+++ G+ VD +T + + + + +
Sbjct: 111 GTIIDTNVLDEKSN-NYLVSIYLDETGA---------GLSYVDSSTGEMYTTESLRE-ES 159
Query: 498 SVLCCLLSELR---PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ +L EL P EII + + + +++ NP +N +D E
Sbjct: 160 ELYNFVLDELGKIFPSEIICNSKFIENKRILKTIKNRINPYIN-------IYDTEAV--- 209
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
NR E+L NV N + + L G + ++STG
Sbjct: 210 -----NRNNWENLIMDHFNVDNLE-----VLDLEGKMYSILSTGK--------------- 244
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
L + L K L +G YMVLD NLE+ E + + G L
Sbjct: 245 -----LIDYLYETQKDSLKHINGIEFYNTDEYMVLDINTRINLEIHETIMTREKKGALIW 299
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDM 733
L+ TA G RLL++WL +PL N I +RQ+ V VN + + + L + D+
Sbjct: 300 LLDKTSTAMGGRLLKSWLEQPLINIKEIEKRQNMVQLF--VNDIILMDQVKNCLKNIYDL 357
Query: 734 ERLLARL 740
ERL+ ++
Sbjct: 358 ERLIGKI 364
>gi|57239001|ref|YP_180137.1| DNA mismatch repair protein MutS [Ehrlichia ruminantium str.
Welgevonden]
gi|58578938|ref|YP_197150.1| DNA mismatch repair protein MutS [Ehrlichia ruminantium str.
Welgevonden]
gi|81672822|sp|Q5HBQ7.1|MUTS_EHRRW RecName: Full=DNA mismatch repair protein MutS
gi|57161080|emb|CAH57987.1| DNA mismatch repair protein MutS [Ehrlichia ruminantium str.
Welgevonden]
gi|58417564|emb|CAI26768.1| DNA mismatch repair protein MutS [Ehrlichia ruminantium str.
Welgevonden]
Length = 804
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 185/412 (44%), Gaps = 66/412 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPERNFSM 389
+Q+ K ++ + ++F+++G FYELF DA +K L++ K G P CG P +
Sbjct: 11 MQQYVTLKQQYKEYLLFYRLGDFYELFFDDAIKTSKILNIVLTKKGNVPMCGVPFHSSET 70
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ KL + GY++ + EQ ET E+ +++G K +VKR++ +VT GT+ E LL A
Sbjct: 71 YLNKLVKLGYKIAICEQLETSEE----ARKRGYKS-LVKRDVVRIVTPGTIVEDSLLEA- 124
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+++YL + S A + G+ + + LD +L + P
Sbjct: 125 KESNYLACIVMIKDSCAIAWLELSTGLFCYHMT--------YISKLDSDLL-----RIGP 171
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ ++L E +I++ R + S F+D + N+Y
Sbjct: 172 KELLVADDLLEIEAVYSIIKKYRFSITQ---YSSSFFDENRAYNTLCNVY---------- 218
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
G++ L G+ GD +S G L Y+ + +
Sbjct: 219 -------------GVSTLKGL-------GDLKGVEISVCGSLLEYVIAT----------Q 248
Query: 630 FELLPCSGF-GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
LP GF + +M +DA AL NLE+F +++SG+ G+L A ++ VTA G RLL
Sbjct: 249 KGSLPKLGFPKAYVQSDFMFIDAAALRNLELF-STQSGELEGSLIASIDFTVTASGGRLL 307
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
+ L+ PL ++ I R V NQ R+ L + D+ER+L R+
Sbjct: 308 KRCLSAPLASADAINRRLSVVEFFVN-NQNLYKSVRQVLRGIADIERILTRV 358
>gi|261367034|ref|ZP_05979917.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
gi|282571152|gb|EFB76687.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
Length = 872
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 149/604 (24%), Positives = 256/604 (42%), Gaps = 99/604 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-------PH 379
+S +Q++E K +H ++++F+++G FYE+F DA ++EL+L + G+ P
Sbjct: 6 VSPMMQQYFEIKKQHPNEILFYRVGDFYEMFYDDALTASRELELT-LTGKNCGKEERAPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P ++ V +L KGY+V + EQ E P KG +VKR+I VVT GT
Sbjct: 65 CGVPFHSYETYVARLIAKGYKVAICEQMEDPAL------AKG----LVKRDIIRVVTPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ E +L+ + + +YL ++ + ++ GIC D++T ++ +
Sbjct: 115 VIESSMLAEDKN-NYLCSIYCKRRRGHWRA-----GICFADISTGEARATELNAEKIGGA 168
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ L P EI ++ P P+ +F D + + +
Sbjct: 169 IITELCRYMPSEI-----LICP-------------------PMLDFKDVTGYIKQHTSAL 204
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ E+ K D+ + ++ A G P + L D + V A+ L YL+++
Sbjct: 205 VELREEACYK-DALLESTMAGQFG----PEWRTTL--GYDEDALVPYAVAALLNYLQET- 256
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
K L + A YM L NLE+ E R + GTL L+
Sbjct: 257 --------QKHGLERIKTVDNYADAQYMRLSPVTRANLELTETMRGREKRGTLLWVLDKT 308
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
T+ GKRLLR+W+ +PL ++ I R AV L N A + ++ALS + D+ERL R
Sbjct: 309 ETSMGKRLLRSWIEQPLVDAEAINARLSAVQALYTANIARA-DLKEALSHVFDIERLTTR 367
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHH 799
+LY A ++++ + S+ GA L QL
Sbjct: 368 ---------------ILYGSATPREVKALGDTCARLPEVKTQASACGAPLLT----QLAD 408
Query: 800 ILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEASLTK 858
+ P + +L+ A ++ + GG + Y+S ++++I
Sbjct: 409 QIDP------LDDLLQKITTAL----VDDPPATLKDGGAIRAGYNSEVDELRDIMHGGKG 458
Query: 859 HLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPN 914
+L + KL +T I + IG + Y +EV S SVP + + + RY TP
Sbjct: 459 YLANLETKLREETGIPKLKIGFNKVFGYYIEVSRSYTDSVPDSFTRKQTLTTGERYITPE 518
Query: 915 IKKL 918
+K+L
Sbjct: 519 LKEL 522
>gi|157825535|ref|YP_001493255.1| DNA mismatch repair protein MutS [Rickettsia akari str. Hartford]
gi|166232129|sp|A8GMX2.1|MUTS_RICAH RecName: Full=DNA mismatch repair protein MutS
gi|157799493|gb|ABV74747.1| DNA mismatch repair protein [Rickettsia akari str. Hartford]
Length = 886
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 179/420 (42%), Gaps = 68/420 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCG 381
++ +Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG
Sbjct: 16 TKMMQQYLDIKFAHLDCLLLFRMGDFYEMFYDDAILASNVLGIALTKRGKNGEEEIAMCG 75
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL Y+V + +Q ETPE K +G VV R++ ++T GT+
Sbjct: 76 VPYHALEHYLTKLIEANYKVAICDQLETPED----AKNRGGYKAVVTRDVTRIITPGTII 131
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+ A+ + +YL +L N+ AS IC VD++TS I + V + + +
Sbjct: 132 EENLI-ASAEPNYLASLVIPQNKETAS--------ICYVDLSTSEIFVVNVPE----AEI 178
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+P EI+ N+ S +I + L + Y
Sbjct: 179 LNELARLKPREILVSENLRSSNLADSIFKQ----------------------LNFRITYQ 216
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ ++NK + + D + GI G+ S + +G L YL
Sbjct: 217 VDSCFAINKCKKIILDFYKMKD----IKGI-------GEISSSQICVIGSILEYL----- 260
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NL + NS+ G S+G+L +NH V
Sbjct: 261 --SLTQKQNIPHLPIPRIINF--HSYMTIDFSTRHNLAIVINSQ-GSSNGSLLNTINHTV 315
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L + D+ER L R+
Sbjct: 316 TKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVQRIRELLKKTSDIERCLTRI 374
>gi|336379827|gb|EGO20981.1| hypothetical protein SERLADRAFT_441366 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1060
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 146/639 (22%), Positives = 264/639 (41%), Gaps = 73/639 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSM 389
+KQ +F + ++ + G Y +E A + +KEL + YM+ P
Sbjct: 206 EKQVLQFIRDNPGTMLMVETGYKYYFYEDSAKIASKELGIVCYMRRNLWTASVPVHR--R 263
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ +L +G++V ++EQ ET +K +++ + +R++ + T T + E+ S +
Sbjct: 264 DSYRLLSQGHKVGIIEQVETAAL----KKVSENRNTLFQRKLTHLYTATTYVD-EMDSVD 318
Query: 450 P----DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ L+ L E ++ ++S D G+ + T G V+ D + L +
Sbjct: 319 DLDKHTSPSLLCLVEHSKDD-TRSNDVSIGMISISPRT-----GDVLPPKDTYMRIDLET 372
Query: 506 EL---RPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L RP E++ P LS TE+ + +T + N L F D L ++ +
Sbjct: 373 RLVHTRPAELLLPHEGLSKFTEKLLTHYTESSTENSKPRLERFND----TLTYTEAFDFV 428
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ +K+ N E L S D QV+ L + YL + +
Sbjct: 429 SGFYADKSKGRSGNVDPE-----------KLLASVTDFPQQVVIVLAHAIKYLSAFSIAD 477
Query: 623 TLL--RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L RF F + +M+L+ L NLE++ N + G+L L+
Sbjct: 478 AFLGIRF----------FMRFTNRTHMLLNGNTLVNLEIYRNETDFTTKGSLMWILDRTT 527
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T FG RLL++W+ RPL + ++ ER DAV + + + ++ L +LPD+ + L R+
Sbjct: 528 TKFGARLLKSWVGRPLVHKEILEERMDAVEEIISSSSERLVALKQVLKKLPDLSKGLCRI 587
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ ++ ++ A + GC+ D A A L L +
Sbjct: 588 QYGKCTPQELATLLLAFKKVA--------TVFEGCK--DSADGGFRAKLLKELVISLPKL 637
Query: 801 LTPGKGLPAIVSILKHF---KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
P L +S+ K F KD W + + + D ++ +EA L
Sbjct: 638 KQPVMDLLGSISLQKAFDGRKDTL-WSDPDKYPAL----------DDMAMAIQAVEADLK 686
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKK 917
+ LK RK+L + + T + YL+E+ ++ VP ++ + S K RY TP++KK
Sbjct: 687 EELKSIRKVLKKPLLQWTTFAGEEYLVELKKTENREVPPNWFIASRTKYLTRYLTPDVKK 746
Query: 918 LLGELSQ-AESEKESALKSILQRLIGQFCEHHNKWRQMV 955
E ++ ES + A+K+ L +H+ R V
Sbjct: 747 KRDERARYMESLQAEAIKAFESFLNDIVQDHYTVIRDAV 785
>gi|70987164|ref|XP_749062.1| DNA mismatch repair protein Msh3 [Aspergillus fumigatus Af293]
gi|74668576|sp|Q4WGB7.1|MSH3_ASPFU RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|190359852|sp|B0YCF6.1|MSH3_ASPFC RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|66846692|gb|EAL87024.1| DNA mismatch repair protein Msh3 [Aspergillus fumigatus Af293]
gi|159123167|gb|EDP48287.1| DNA mismatch repair protein Msh3, putative [Aspergillus fumigatus
A1163]
Length = 1123
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 163/683 (23%), Positives = 271/683 (39%), Gaps = 109/683 (15%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH------ 379
+KQ E K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 214 EKQVIEIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAHLDR 273
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P ++V++L GY+V VV Q ET + +++ R++ + T
Sbjct: 274 FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAAL----KAAGDNRNAPFSRKLTNLYT 329
Query: 437 KGTLT---EGELLSANPDAS--------YLMALTESNQSPASQSTDRCFGICVVDVATSR 485
KGT EG L A P AS Y++ +TE+N GI V T
Sbjct: 330 KGTYVDDVEG-LDGATPAASGGASPATGYMLCITETNAKGWGNDEKVHVGIVAVQPNTGD 388
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLVPL 542
+I D S + L + P E++ LS TE+ +++H +N D V +
Sbjct: 389 VIYDDFDDGFMRSEVETRLLHIAPCELVIVGE-LSKATEK-LVQHLSGSKLNTFGDKVRV 446
Query: 543 SEFWDAETTVLE----IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG 598
+T V E + N Y A AN+ + L +L
Sbjct: 447 DRVAKKKTAVAESHSHVANFY---------AAKLKAANTADDAPASNLLQKVL------- 490
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
+ QV L + +L + L E + K+ F + + +M+L+A L +LE
Sbjct: 491 NLPEQVTVCLSAMIQHLTEYGL-EHIFELTKY-------FQHFSSRSHMLLNANTLVSLE 542
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
+++N + G+L+ L+ T FG+RLLR W+ RPL + + ER +AV L+ +
Sbjct: 543 IYQNQTDHSAKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEELKSPERT 602
Query: 719 FALE-FRKALSRL-PDMERLLARLFASSEANGRNSNKVVL------------YEDAAKKQ 764
E + L ++ D+E+ L R++ G+ + +L Y D Q
Sbjct: 603 VQAERLKIMLGKIKSDLEKNLIRIY-----YGKCTRPELLTVLQTLQTIAQEYVDVKTPQ 657
Query: 765 LQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV 824
F S + G E + + S LG +++ +H K + F+
Sbjct: 658 DSGFTSPILG-EAIARVPSILGDVVKFLNKINMHAARNDDK--------YEFFR------ 702
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
E+ + I H C + +E L +H +L +TYVT YL+
Sbjct: 703 ESEETEGISEH---------KC-GIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLI 752
Query: 885 EVPESLRG--SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
EV S VP + S K R+ TP + +LL + Q + +A L+
Sbjct: 753 EVENSAAAIKRVPASWVKVSGTKKVSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLA 812
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
+ ++ +R V + A L +L
Sbjct: 813 EIASNYQSFRDCVQSLATLDCLL 835
>gi|373106358|ref|ZP_09520661.1| DNA mismatch repair protein MutS [Stomatobaculum longum]
gi|371652733|gb|EHO18141.1| DNA mismatch repair protein MutS [Stomatobaculum longum]
Length = 867
Score = 116 bits (291), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 182/432 (42%), Gaps = 79/432 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPHC 380
LS + E K + D ++F+++G FYE+F DA + +KEL+L E P C
Sbjct: 3 LSPMMTHYLETKKAYPDCLLFYRLGDFYEMFFEDARLASKELELTLTGKECGLEERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L ++GY+V V EQ E P + KG +VKRE+ VVT GT+
Sbjct: 63 GVPFHAADSYINRLVKRGYKVAVAEQMEDP------KLAKG----LVKREVIRVVTPGTV 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T L + +YL A+ E N D G V A R LG +
Sbjct: 113 TAAGALEEEKN-NYLAAVLEDNGRYGLAFADISTGSFFVTEADGRKELGDI--------- 162
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+E P E++K N+ + LRH +++L P S F L ++ +
Sbjct: 163 ---LAEFHPAELLKRKNL----SLDGCLRHEEALAISEL-PDSAFLRDNAVSLLTEH-FR 213
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
T E+L +D + G+ L L T S ++++
Sbjct: 214 AATTEALGLSDYPL--------GMLAAGAALRYLYDTQKSRCELIT-------------- 251
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
EL G Y+ +DA + NLE+ E R + G+L L+
Sbjct: 252 ----------ELKAYRG------NAYLFIDAASRRNLELTETLRDKNKHGSLLWVLDRTK 295
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--RGVNQPFALEFRKALSRLPDMERLLA 738
TA G R LR L +PL I RQDA+ R +++ E R+ L+ + DMERL+
Sbjct: 296 TAMGARFLRNLLEKPLLGIPEIEVRQDAIQEFLSRYIDRE---ELREYLAPIYDMERLMG 352
Query: 739 RLFASSEANGRN 750
R+ S AN R+
Sbjct: 353 RITLGS-ANARD 363
>gi|302823252|ref|XP_002993280.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
gi|300138950|gb|EFJ05701.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
Length = 942
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 165/672 (24%), Positives = 271/672 (40%), Gaps = 91/672 (13%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q E K K D ++G + F DA A L + Y P +
Sbjct: 10 EQQIVELKKKFPD----IQVGYKFRFFGEDAEKAANVLGIVAYYSHNFLTASVPTFRLHV 65
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+V +L GY+V VV+QTET + +K R++ A+ TK TL GE L
Sbjct: 66 HVRRLVEAGYKVGVVKQTETAAI----KAHGTNKAGPFSRDLSALYTKATLEAGEFLGGE 121
Query: 450 PD---------ASYLMALTE---------SNQSPASQSTDRCFGICVVDVATSRIILGQV 491
+SY+M + E + + S D FG+ V+ +T ++ G
Sbjct: 122 ESGERDGPIRLSSYIMCVVEEAITEHKANAGKDEVRGSFDARFGVVAVETSTGDVMYGHF 181
Query: 492 MD-----DLDCSVLCCLLSELRPVEIIKPAN--MLSPETERAILRHTRNPLVNDLVPLSE 544
MD +L+ +L C +EL + + +L A +R + P
Sbjct: 182 MDTVTRTELESRLLACAPAELLLSASLSASTKKLLMDYAGAADVRVEKTP--------EN 233
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
+D TV + + Y + + D V DG + L L++ + V
Sbjct: 234 SFDNGGTVAALADFYGSLASSKKGCLDEKV-------DGGLEVIFYLQALMTMPEI---V 283
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
++A YLK+ F E +LR F A + M L + LE+ N
Sbjct: 284 VAAFAHIFAYLKQ-FNLENVLRLGAL-------FRPFAGQQEMTLSPNTIRQLEILHNQT 335
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--------RGVN 716
G +G L+ +NH TAFG RLL+ W+ PL + LI +R DAVA + RG
Sbjct: 336 DGTENGCLFWLMNHTKTAFGARLLKYWVTHPLRDRMLISQRLDAVAEIAESIGDKGRGTT 395
Query: 717 QPFALEFRKALSRLPDMERLLARLF---ASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
L +LPD+ER + R++ A+ EA N VV+ D + FI+ ++
Sbjct: 396 VATLASTLLLLGKLPDLERGITRIYHKTATYEAPFLFCNPVVILSD------RNFINVIN 449
Query: 774 GCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV--EANNSGR 831
+ +A S + + S L +++ S++ H + EA +G
Sbjct: 450 A---IMKAASQFQRV-RDARSALLSRLISAVTS----TSVIDHANKLVTSLNAEAAAAGD 501
Query: 832 IIPH--GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
I G + D + +K IE L L RKLL +++ Y+++ +L+EVP +
Sbjct: 502 KINLFVAGQFPEVDECKENIKSIEEDLESFLPSYRKLLKCSNLEYLSVSGTSFLVEVPCA 561
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
R VP D+ +S K RY P + + ++ A+ + + + F +H
Sbjct: 562 QR--VPADWVKINSTKKANRYHPPEVLEASERMALAKEQLNISCAKAWDMFLTDFTSYHM 619
Query: 950 KWRQMVAATAGL 961
++R V A A L
Sbjct: 620 EFRAAVQALAAL 631
>gi|190359867|sp|Q5B6T1.2|MSH3_EMENI RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
Length = 1105
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 150/671 (22%), Positives = 276/671 (41%), Gaps = 79/671 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ +KQ E K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 195 LTPMEKQVIEIKKKHMDTILLIEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSEA 254
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P + ++V++L G++V VV Q ET + +++ R++
Sbjct: 255 HLDRFASASIPVQRLHVHVKRLVAAGHKVGVVRQLETAA----LKAAGDNRNAPFVRKLT 310
Query: 433 AVVTKGTLT------EGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATS 484
V TK T EG A+ ++ Y++ +TE+N GI V T
Sbjct: 311 NVYTKSTYIDDIESLEGSTAGASGASATGYILCITETNARGWGNDEKVHVGIVAVQPTTG 370
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
I+ + D S + L + P E++ LS TE+ + L ++ + D V +
Sbjct: 371 DIVYDEFDDGFMRSEIETRLLHIAPCEMLIVGE-LSKATEKLVQHLSGSKMNVFGDKVRV 429
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
A+T E + + AE + AD+ A+ + + L + G+
Sbjct: 430 ERAPKAKTAAAESHSHVSSFYAEKMKSADA--ADDEVASNLLQKVLGL----------PD 477
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
QV L + ++ + L E +L+ K+ F + + +M+L+ L +LE+++N
Sbjct: 478 QVTICLSAMIKHMTEYGL-EHVLQLTKY-------FQHFSSRSHMLLNGNTLTSLEIYQN 529
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G+L+ L+ T FG+R+LR W+ RPL + + +R +AV L+ +E
Sbjct: 530 QTDYSSKGSLFWTLDRTQTRFGQRMLRKWVGRPLLDRRQLEDRVNAVEELKDFRNVVMVE 589
Query: 723 -FRKALSRLP-DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ L ++ D+E+ L R++ G+ S E ++ L +++ Q
Sbjct: 590 RIKGLLGKIKHDLEKGLIRIY-----YGKCSRP-------------ELLTILQTMQMIAQ 631
Query: 781 ACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM 840
+ + + + S I LP I+ + F + + A N + +
Sbjct: 632 EFADIESPADTGFSSPA--ISQAIMSLPTILKDVVFFLNKINMHAARNDDKYEFFREEEE 689
Query: 841 DYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEV----PESLRGSV 894
+ + K + +E L +H + LG +TYV++ YL+EV P R V
Sbjct: 690 TEEISEHKLGIGAVEHELEEHRPVAGEALGKKMVTYVSVAGIDYLVEVENNSPAIKR--V 747
Query: 895 PRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
P + S K R+ TP + K++ + Q +A L + ++ R
Sbjct: 748 PASWMKISGTKKVSRFHTPEVVKMIRQRDQHREALAAACDKAFLALQAEIATNYQALRDC 807
Query: 955 VAATAGLTLIL 965
V + A L ++
Sbjct: 808 VQSLATLDCLV 818
>gi|392412916|ref|YP_006449523.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
gi|390626052|gb|AFM27259.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
Length = 870
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 171/655 (26%), Positives = 275/655 (41%), Gaps = 116/655 (17%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
NL+ +Q+ E K +H D ++ F+MG FYE+F DA +K L++ ++ P
Sbjct: 5 NLTPMMRQYRENKERHPDAILLFRMGDFYEMFFDDAIKASKILEIALTSRDKNKEESVPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CGFP S + +L G RV V +Q E P RK KG +V+RE+ V+T G
Sbjct: 65 CGFPHHAASGYISRLLASGERVAVCDQMEDP------RKAKG----IVRREVTRVLTPGL 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
E E+L A+ + +++AL A Q D + D++T ++ V + ++
Sbjct: 115 HEESEILKAD-EHHFVVAL-------AFQGKD--LALAAFDLSTGDLL---VTEPPGTAL 161
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L L P E++ ET +A L ++ V E W E
Sbjct: 162 ALQELQRLDPKEVLVAER--QAETLQAFLDSSQF-----YVHFVEEWMTEP--------- 205
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++ S+V Q E L E D + ++A G + Y++++
Sbjct: 206 ---------RSCSDVLRQQYEVQNL--------EGFGFSDDSAPAVAA-GTIINYVRQTR 247
Query: 620 LDETLLRFAKFELLP--CSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ A L P G+ YMVLD NLE+F N + G +SGTL L+
Sbjct: 248 YE------APIHLKPPRVYHLGN-----YMVLDRSTTRNLEIFTNLKDGGTSGTLLKLLD 296
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERL 736
+TA G R +R+W A PL + I R DAV+ V+ E R AL + D+ER+
Sbjct: 297 RTLTAMGARTIRSWTAYPLLDLREIHRRIDAVSAF--VDSTITRGELRDALKGIGDLERI 354
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
++ S AN R+ ++Y + +++ + L G E S L L N +
Sbjct: 355 AGKISLRS-ANPRD----LVYLRNSCEKIPVVLKLLSGVE------SELVGELRNADD-- 401
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD---SACKKVKEIE 853
L ++ AI S+L DA V + G I G + + D S K KE
Sbjct: 402 LSYVAH------AIASVLV---DA-PPVSLKDGGLI--RDGYNQELDELRSISHKGKEWI 449
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRY 910
A++ KE+ T I + +G + Y +EV +S + VP Y + + RY
Sbjct: 450 AAIEAREKEE------TGIPNLKVGYNRVFGYYIEVTKSYQSKVPASYIRKQTLANAERY 503
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
T ++K+ ++ A+ + I L + E + + +A L IL
Sbjct: 504 ITDDLKEYENKVLNAQERIVEIEEEIFNLLRTRLLEVIGRIQATASAIGTLDAIL 558
>gi|384109603|ref|ZP_10010474.1| DNA mismatch repair protein MutS [Treponema sp. JC4]
gi|383868827|gb|EID84455.1| DNA mismatch repair protein MutS [Treponema sp. JC4]
Length = 880
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 158/648 (24%), Positives = 271/648 (41%), Gaps = 129/648 (19%)
Query: 322 DFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHC 380
D NL+ Q+ E KSK+ ++V+FF++G FYE+F+ DA ++ L+L + QP C
Sbjct: 4 DNAENLTPMMLQYREIKSKYQNEVVFFRLGDFYEMFDADAVEVSRLLNLTLTHRASQPMC 63
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQT-ETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + + +L R G ++++ EQ E P KG K + +R++ ++T GT
Sbjct: 64 GIPYHAAKIYIARLLRLGKKIVICEQVGEIP---------KGGKG-IAERKVVEIITPGT 113
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
E E L ASYL AL+ S G +DV TS +
Sbjct: 114 AVEAEYLDGFK-ASYLAALSISKARA---------GFAFIDVTTSSFRATSWPANKMAEN 163
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+ P E++ P ++ + +A+L N N V WD + Y
Sbjct: 164 FSKELNRAGPRELLLPLSLKTNSDIQAVL----NANTNIAVSYYPDWDFNYDL-----SY 214
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
++T++ AN +A G + G+ + G L YL+K+
Sbjct: 215 KKLTSQ------FKTANLKAFG----------------LEEGACEIVPAGFLLDYLEKT- 251
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ ++ L S F +++D + NLE+ EN R G S +L +++
Sbjct: 252 TNASIPHVNSIRLYQDSEF--------LMMDDSSRRNLEITENMRDGTSQFSLLECVDYT 303
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
TA G RLLR WL PL N I +RQ+ V+ N+ + + LS++ D+ERL R
Sbjct: 304 KTAMGSRLLRNWLLFPLTNLRQIEDRQNRVSNFVE-NRQLLEKVKADLSQILDVERLSGR 362
Query: 740 LFASSEANGRNSNKVVLYEDA---AKKQLQE----FIS---ALHGCEL-----MDQACSS 784
+ A +A+ ++ + L +A K+ L + F+S + CEL +D +S
Sbjct: 363 I-AMEKAHAKDLQALRLSLEAWCKIKEYLNQYDFSFVSSDDSYKICELIKKSILDNPATS 421
Query: 785 L--GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDY 842
L G I+ S +L H + D F+ V
Sbjct: 422 LTEGGIINQGWSEELDH--------------WRQIHDNFNLV------------------ 449
Query: 843 DSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
L+++ +E+R G +++ Y +EV + SVP + +R
Sbjct: 450 -------------LSEYEEEERDATGISTLKIKYNNASGYFIEVSKGKLSSVPSHFIMRR 496
Query: 903 SKKGFFRYWTPNIKKLLGELSQAES---EKESALKSILQRLIGQFCEH 947
+ RY T +++L +L+++ + E E L ++R + Q+ E+
Sbjct: 497 ALVNGDRYTTNRLQELEQQLNESSTKILELERDLFIEVRRSLAQYIEY 544
>gi|407366139|ref|ZP_11112671.1| DNA mismatch repair protein MutS [Pseudomonas mandelii JR-1]
Length = 859
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 152/632 (24%), Positives = 263/632 (41%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + E+ + +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHIIQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YD+ ++ + + + L
Sbjct: 398 KTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLIAQL 542
>gi|300855302|ref|YP_003780286.1| DNA mismatch repair protein MutS [Clostridium ljungdahlii DSM
13528]
gi|300435417|gb|ADK15184.1| predicted DNA mismatch repair protein MutS [Clostridium ljungdahlii
DSM 13528]
Length = 891
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 149/620 (24%), Positives = 256/620 (41%), Gaps = 125/620 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ E K + D ++FF++G FYE+F DA + ++EL+L +K P C
Sbjct: 3 LTPMMQQYMEVKESYKDCILFFRLGDFYEMFFEDAKIASRELELVLTGRDCGLKERAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +L KGY++ + EQ E P KG +VKR I VVT GT
Sbjct: 63 GIPYHAANSYIGRLINKGYKIAICEQLEDPAL------AKG----IVKRGIIKVVTPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD-LDCSV 499
T+ L N + +Y+ L Q+ S +C DV+T D + S
Sbjct: 113 TDSTFLEENKN-NYIACLYIDTQTNIS-------ALCFADVSTGEF---NCTDTPFNLST 161
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ +S+ P EI ++ +L ++ L E + A T +++ +
Sbjct: 162 ILDEISKYSPSEI-----LIQDSISIDLLNKMKDIFSGSFTKLDESYFAGETKNMLEDQF 216
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
T E N +N +++ G L Y++++
Sbjct: 217 ENFTGE-------NYSN--------------------------EIIKCCGSLLKYIRET- 242
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
K +L + F Y+ +D + NLE+ E+ R + G+L ++
Sbjct: 243 --------QKNDLSHINKFSYYNIVDYLTIDGNSRRNLEITESLRENNKKGSLLWVIDKT 294
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
T+ G R LR WL +PL N I ER D+V + N + + ++AL + D+ERL+ +
Sbjct: 295 NTSMGGRQLRRWLEQPLINKVKIEERLDSVEEISN-NISYHEDLKEALKNIYDIERLVGK 353
Query: 740 LFASSEANGRNSNKVVLYEDAAKK--QLQEFISALHGCELMDQACSSLGAILENTESRQL 797
+ +S N + N +++ +K +++ +S H L + EN + +
Sbjct: 354 I-SSKSVNAKELN---FLKNSIEKIPEVKSILSNFH--------TKLLKYMYENLDELKD 401
Query: 798 HHILTPGKGL--PAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
++L L PAI + G +I G Y+S ++KEI+A
Sbjct: 402 IYVLLDKSILDNPAI---------------SLKEGNLIKKG-----YNSDIDELKEIKA- 440
Query: 856 LTKHLKEQRKLLGD-----TSITYVTIGKDL---YLLEVPESLRGSVPRD-YELRSSKKG 906
H KE L + T I + IG + Y +EV +S VP Y + +
Sbjct: 441 ---HGKEWIASLENSEREVTKIKSLKIGYNKVFGYYIEVTKSNLNLVPEGRYIRKQTLTN 497
Query: 907 FFRYWTPNIKKLLGELSQAE 926
RY TP +K++ ++ AE
Sbjct: 498 AERYITPELKEMEDKILGAE 517
>gi|85859743|ref|YP_461945.1| DNA mismatch repair protein MutS [Syntrophus aciditrophicus SB]
gi|123516864|sp|Q2LUL3.1|MUTS_SYNAS RecName: Full=DNA mismatch repair protein MutS
gi|85722834|gb|ABC77777.1| DNA mismatch repair protein [Syntrophus aciditrophicus SB]
Length = 880
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 182/437 (41%), Gaps = 79/437 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGEQ--- 377
+ +L+ KQ+ E K+ H D ++ F+MG FYE+F DA +K LD+ KG++
Sbjct: 9 ISSLTPAMKQYAEVKALHKDCIVLFRMGDFYEIFFEDAVTASKILDITLTSRNKGKEDSI 68
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CGFP S + KL KG++V V EQ E P+ + K
Sbjct: 69 PLCGFPYHASSTYIPKLIEKGFKVAVCEQIEDPK-----------------------LAK 105
Query: 438 GTLTEGELLSANP----DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
G + + P D + L A E+N A + G+ +D++T +V D
Sbjct: 106 GVVRREVVRIVTPGLVVDTANLHA-KENNFLAAVFPLEHHIGLAFLDISTGEF---RVSD 161
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
D L+ L EI+ P +A N D P E++D E+
Sbjct: 162 FQDIRFFETELAALDFREIMVPQGSGKQGFLKA-FAGRENSCRLDEFP-DEYFDRES--- 216
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
+L + + E GL P V+ A G L
Sbjct: 217 ------------ALGRLQDYIRKEDLEDLGLKDCPA--------------VIGAAGAVLR 250
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
Y++++ K L + + Y+VLD A NLE+F+ + ++G+L+
Sbjct: 251 YVEET---------QKSRLTHINRLQWYSAAEYLVLDETAKRNLELFKTIQDNRTAGSLF 301
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDM 733
+ L+ VTA G R LR WL PL + I+ R AVA +R N F RK LS + DM
Sbjct: 302 SVLDETVTAMGGRRLRWWLNYPLVDPEKIKARLAAVAEIRE-NHLFRENLRKVLSEVYDM 360
Query: 734 ERLLARLFASSEANGRN 750
ERL R+ A ANGR+
Sbjct: 361 ERLAGRI-ALGVANGRD 376
>gi|297621573|ref|YP_003709710.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
gi|297376874|gb|ADI38704.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
Length = 841
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 163/658 (24%), Positives = 270/658 (41%), Gaps = 114/658 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNV 391
QW K K ++FF+MG FYE F DA V AKEL+L + E P G P +
Sbjct: 13 QWHACKKKAGTALLFFRMGDFYEAFYDDAIVLAKELELTLTTRQEIPMAGVPHHTCDTYI 72
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
++L KG+R+ V EQT P + KG +V+R++ +VT GTL LLS N +
Sbjct: 73 DRLVAKGFRIAVAEQTSDP------KTSKG----LVERDVTRIVTPGTLVNSSLLSENAN 122
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATS--RIILGQVMDDLDCSVLCCLLSELRP 509
+Y ++T+ G+ +D+ T+ R++ + +L L L+P
Sbjct: 123 -NYFASVTQVGS---------VLGLAFLDLTTADFRVVEFESEQELQGE-----LYRLQP 167
Query: 510 VEIIKPANMLSPETER-AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
E++ A L+H+ N L+N + W E ++IT E L
Sbjct: 168 SELLTSKKFSDKHALLIADLQHSLNLLINT----EDDWRFE----------HQITTEFL- 212
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
S++ +G GL + ++A G L YL+ +
Sbjct: 213 --ISHLKVHTLDGFGLKGMAA--------------GINASGALLHYLRDTL--------- 247
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ + + YM LD NLE+ + + G TL + L+ T G RL+
Sbjct: 248 NLSIDHINTISTYSTNEYMTLDRMTQTNLELTRSLQDGTRKHTLLSILDQTCTPMGGRLI 307
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEAN 747
WL RPL I+ RQDAV + + + + + +L + D+ERL+ ++
Sbjct: 308 LQWLKRPLLCMKTIQARQDAVQSF--IERDWTHDQLKASLEDVRDIERLMMKV------- 358
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL 807
++N + AA + E + + A SSL T +QL+ L
Sbjct: 359 --SANYASPKDIAALRHSIEPLGKIKSLLREPAAASSLI----QTHEKQLN-------PL 405
Query: 808 PAIVSILKH-FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRK 865
P ++S++ + D + + + G I G + +++EI A+ L Q K
Sbjct: 406 PELISLIANALVD--EPPQKLSDGNIFRKG-----FHQELDEIREISANSKSWLNNYQNK 458
Query: 866 LLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
L + I + +G + Y +EV + G VP +E R + R+ T ++K E
Sbjct: 459 LREELDIKNLKVGFNRMFGYYIEVSKGQAGKVPESFERRQTLVNAERFITKDLK----EY 514
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA-GLTLI-----LLDGSLLHAF 974
Q E + SI Q L Q ++ +V TA L +I L + + LH +
Sbjct: 515 EQKVLTAEEKISSIEQELFQQLRTEVTRYADIVIKTAQSLAIIDCLQALAEAARLHGY 572
>gi|389624605|ref|XP_003709956.1| DNA mismatch repair protein MSH3 [Magnaporthe oryzae 70-15]
gi|190359846|sp|A4R0R0.1|MSH3_MAGO7 RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|351649485|gb|EHA57344.1| DNA mismatch repair protein MSH3 [Magnaporthe oryzae 70-15]
gi|440481983|gb|ELQ62513.1| DNA mismatch repair protein Msh3 [Magnaporthe oryzae P131]
Length = 1151
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 154/667 (23%), Positives = 257/667 (38%), Gaps = 81/667 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ E K KHMD V+ ++G + F DA + KEL + + G E P
Sbjct: 232 QFLEIKRKHMDTVLIVEVGYKFRFFGEDARIAGKELSIVCIPGKFRYDEHPSEAHLDRFA 291
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L G++V VV Q ET +K +++ R++C V TKG
Sbjct: 292 SASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRKLCEVYTKG 347
Query: 439 TLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
T + GE+ S YL+ LTE+ + G+ V AT II
Sbjct: 348 TYIDEMGEMDAQTGASGAHSGGYLLCLTETAAKGSGTDEKVDVGLVAVQPATGDIIYDSF 407
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAE 549
D S + L + P E++ LS TE+ + L + + + D + +
Sbjct: 408 EDGFMRSEIETRLLHISPCELLI-VGQLSKATEKLVKHLSGSASNVFGDRTRVERVAKGK 466
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
TT E + + A L K + + A D + LP V L
Sbjct: 467 TTPAEASSHVTKFYAGKL-KGSTQDDRAAALLDKVLNLP-------------EPVTLCLS 512
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
+ +L + F E + K+ F + + +M ++ LE+LEV+ NS
Sbjct: 513 AMITHLTE-FGLEHIFDLTKY-------FQSFSTRSHMCINGTTLESLEVYRNSTDHTEK 564
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSR 729
G+L L+ T FG+R+LR WL RPL + + +R AV L E R
Sbjct: 565 GSLLWALDKTRTRFGQRMLRKWLGRPLLDKERLDDRVAAVEEL--------FENRNG--- 613
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH--GCELMDQACSSLGA 787
P +E+L +L +S + + S + Y + +L + L E + S
Sbjct: 614 -PQVEKL-QKLLSSIKTDLERSLIRIFYGRCTRPELLAVLQTLQRIAVEYIVVKEPSQTG 671
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAF--DWVEANNSGRII------PHGGVD 839
N S L LP I I+ + + D N+ +
Sbjct: 672 FKSNLVSEAL-------ASLPRIREIVVSYLNRINPDAARKNDKYEFFRDESDDTGDDGE 724
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
+ + + +E L H + LG ++ YVT+ YL+EVP + VP +
Sbjct: 725 DEITTQKMSIAAVEQELDAHRSDAAATLGRKKAVDYVTVAGIEYLIEVPNTEIRKVPASW 784
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
S K R+ TP + +L+ E Q + +A + + ++ + + R V++
Sbjct: 785 AKISGTKKLSRFHTPEVVRLIAERDQHKEALAAACDAAFKAMLASIADQYQPLRDAVSSL 844
Query: 959 AGLTLIL 965
A L +L
Sbjct: 845 ATLDCLL 851
>gi|427431014|ref|ZP_18920710.1| DNA mismatch repair protein MutS [Caenispirillum salinarum AK4]
gi|425878191|gb|EKV26910.1| DNA mismatch repair protein MutS [Caenispirillum salinarum AK4]
Length = 909
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 178/419 (42%), Gaps = 79/419 (18%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPERN 386
Q+ K +H D ++F++MG FYELF DA A+ LD+ K GE P CG P +
Sbjct: 36 QYLSIKREHADCILFYRMGDFYELFFDDAVKAAEALDIALTKRGKHAGEDIPMCGVPVHS 95
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ KL RKG++V V EQ E P + K++G K +V+RE +VT GT+TE LL
Sbjct: 96 HEAYLAKLIRKGFKVAVCEQMEDPAEA----KKRGGK-ALVRREAVRIVTPGTITEDSLL 150
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ +YL A+ ++ G+ +DV+T V + L L+
Sbjct: 151 DSRRH-NYLAAVADAGGG---------LGLAWLDVSTGAFTCQPVEE----RNLTHALAR 196
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L P E++ P +L E+ + R+ L +P + F
Sbjct: 197 LAPGELLAPDRLLQKESLFEVFTEYRDRLSP--LPSARF--------------------- 233
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLR 626
+S G L L G+ Q L A GG F + TL+
Sbjct: 234 ---------DSTNAGKRLQALYGV------------QALDAFGG--FSRAEVAAAGTLVD 270
Query: 627 FA----KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTA 682
+ K +L M + M +DA NLE+ E + +G+ G+L ++ VT
Sbjct: 271 YVELTQKGKLPRIGALRRMGEGAAMEIDAATRRNLELAE-TLTGERKGSLLQVIDRTVTG 329
Query: 683 FGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
G RLL L+ PL I R DAV V P E R+ L R PD+ER L+RL
Sbjct: 330 AGARLLAAHLSAPLTEPAEIDARLDAVQFF--VEAPTVREDVRERLKRCPDVERALSRL 386
>gi|77164436|ref|YP_342961.1| DNA mismatch repair protein MutS [Nitrosococcus oceani ATCC 19707]
gi|115299211|sp|Q3JCL5.1|MUTS_NITOC RecName: Full=DNA mismatch repair protein MutS
gi|76882750|gb|ABA57431.1| DNA mismatch repair protein MutS [Nitrosococcus oceani ATCC 19707]
Length = 863
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 165/648 (25%), Positives = 267/648 (41%), Gaps = 116/648 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K+++ + ++ ++MG FYELF DA ++ LD+ GE P G P
Sbjct: 15 QQYLRIKAEYPNTLLLYRMGDFYELFYDDAQRASELLDIALTSRGRSAGEPIPMAGIPYH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L R+G V + EQ P KG V+R++ ++T GT+TE L
Sbjct: 75 ALDSYLARLVRQGESVAICEQIGNPA------ASKGP----VERQVVRIITPGTVTEEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D N A Q FG V+D+ + R + +V + + S
Sbjct: 125 LEARRD----------NLLAALQKEGDVFGFAVLDLCSGRFNILEVASESAAT------S 168
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL I+PA +L E IL ++ V +P ++D E+ ++ +
Sbjct: 169 ELAR---IRPAELLVSEDLALILVDSKTEAVVRPLP-PWYFDRESAQRQLCRQF------ 218
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
G L G E + T ++A G L Y++ D
Sbjct: 219 -----------------GTQDLAGFGCEEMKTA------IAAAGCLLHYVQ----DTQRT 251
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS-GTLYAQLNHCVTAFG 684
+F L ++ ++LD NLE+ E S SGDS TL A L+H TA G
Sbjct: 252 QFPHIHALQVE-----RQETSIILDPSTRRNLEL-EESLSGDSGRNTLIAVLDHTATAMG 305
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR +L RPL + L+++RQ A+A L + + + L + D+ER+L+R
Sbjct: 306 SRLLRRYLHRPLRDQTLLKQRQQALATL--LEGGLSDVLQTLLRGIGDIERILSR----- 358
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V A + L +F AL + ++ L N +S L +
Sbjct: 359 ----------VALRSARPRDLVQFRQALGLLPKIQESLLQL-----NRDSLLLQSLQEDL 403
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL-KE 862
P + +L+ N +I GGV + +DS +++ + + + L K
Sbjct: 404 GPFPNLHELLQR-------AICENPPVLIRDGGVIALGFDSELDELRHLSGNAGQFLVKL 456
Query: 863 QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ T I + +G + Y LE+ + P DY R + KG RY TP +K
Sbjct: 457 EQRERERTKIPTLKVGYNKVHGYYLEITRAQAHQAPPDYIRRQTLKGAERYITPELK--- 513
Query: 920 GELSQAESEKESAL---KSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
G Q S +E AL K++ + L+ QF E R A A L ++
Sbjct: 514 GFEDQVLSARERALAREKALYEELLEQFMEPLPALRACANALAELDVL 561
>gi|449446175|ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 1094
Score = 116 bits (290), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 166/696 (23%), Positives = 297/696 (42%), Gaps = 94/696 (13%)
Query: 313 DPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-Q 371
DP+ Y P + +Q + K ++ D ++ ++G Y F DA + A+ L +
Sbjct: 110 DPKYKYTPLE---------QQVVDLKKRYPDVLLMVEVGYRYRFFGQDAVIAARVLGIYA 160
Query: 372 YMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKRE 430
++ P +++V +L GY+V VV+QTET K GS K R
Sbjct: 161 HLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAI-----KAHGSNKLGPFCRG 215
Query: 431 ICAVVTKGTLTEGELLSANPD-----ASYLMALTESNQSPAS------QSTDRCFGICVV 479
+ A+ TK TL + L + ++YL L E++ S + D G+ +
Sbjct: 216 LSALYTKATLEAAQDLGGAEEGCAGESNYLFCLVENSMSVQNVDCRIENGVDVKIGMVAM 275
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN-- 537
+++T +I G+ D+ + L +L L P E++ + +S TE+ +L + P +N
Sbjct: 276 EISTGDVIYGEYDDNFMRNGLEAMLLSLSPAELLL-GDPISKPTEKLLLGYA-GPALNVR 333
Query: 538 -DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIS 596
+ V F D + + E+ ++Y I + + + N + G + E+++
Sbjct: 334 VERVSGDCFKDG-SALAEVMSLYENIDQNNFTEDN----NPEKVLVGQKSNRSAIKEIVN 388
Query: 597 TGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALEN 656
+ L AL T+ +LK+ L+ + + F C K M L L
Sbjct: 389 MPNLA---LQALALTIRHLKQFGLERIVSLASSFRPFSC--------KMEMTLSGNTLTQ 437
Query: 657 LEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL---- 712
LEV +N+ G +G+L +NH +T FG RLLR W+ PL + +I RQ+AV+ +
Sbjct: 438 LEVLKNNDDGSETGSLLHCMNHTLTIFGSRLLRQWITHPLCDRNMIIARQEAVSEIAASM 497
Query: 713 ---------RGVNQPFA--------LEF-----RKALSRLPDMERLLARLFASSEANGR- 749
R +++ ++ L + L R PD++R + R+F + A
Sbjct: 498 VSSKVSPNNRALDEEYSDVIVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEF 557
Query: 750 -NSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP-GKGL 807
+ +L+ A KQLQ+F + D CSS +I+ + R+L IL+ GL
Sbjct: 558 IAVIQAILF---AGKQLQQF-----HIDEEDDNCSS-ESIIGSKLLRKL--ILSASSSGL 606
Query: 808 PAIVSILKHF--KDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRK 865
I + L K+A D + + +I + A K+ + L + RK
Sbjct: 607 INIAAKLLSTISKEAAD--QGDFPNLMIIYSDQFPKVARARKEAQSAREKLDALITFYRK 664
Query: 866 LLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQA 925
LG + + ++ +L+E+ ++ VP + +S K RY P + L ELS A
Sbjct: 665 QLGMRKLEFTSVSGTTHLIELAIDVK--VPSQWVKINSTKKTVRYHPPEVLAALDELSLA 722
Query: 926 ESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
E A + + F ++ +++ V A A +
Sbjct: 723 NEELMVASRDAWDDFLRGFSRYYAEFQAAVQALASI 758
>gi|419759908|ref|ZP_14286193.1| DNA mismatch repair protein MutS [Thermosipho africanus H17ap60334]
gi|407514947|gb|EKF49733.1| DNA mismatch repair protein MutS [Thermosipho africanus H17ap60334]
Length = 828
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 180/421 (42%), Gaps = 87/421 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-PHCGF 382
L+NL+ KQ+ + K + D ++ F++G FYE F DA + +K L++ K + P G
Sbjct: 12 LKNLTPMMKQYMDIKKNYEDAIVLFRLGDFYEAFFEDAEIISKVLNIVLTKRQNAPMAGI 71
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
P ++KL GY+V + EQ E P Q KG +V+RE+ V+T GTL E
Sbjct: 72 PHHALDNYLKKLVDSGYKVAICEQMEDPSQ------AKG----IVRREVTRVITPGTLIE 121
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG--QVMDDLDCSVL 500
+LLS+ + +YLMA+ + F VDV+T + + + ++DL
Sbjct: 122 EDLLSS--ENNYLMAV----------AFRENFNTAFVDVSTGELFVKDFETINDL----- 164
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
++ + N+ E I ++ L N + + W E ++K +
Sbjct: 165 ---------IDFVSIVNISQIICEENIFEELKDNLPNKFIEKLDDWYFEGFEDKVKETFK 215
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
++ + ++N Q L LG L YL+ + +
Sbjct: 216 IVSIDHF-----ELSNGQ--------------------------LRVLGALLKYLEYTLM 244
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L K + + +M+LD+ ++NL + G+ LY LN
Sbjct: 245 SNLALEEPK----------KLEESKWMILDSKTVDNLSLI----PGEKGKNLYDILNKTK 290
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
TA G RLL+ W+ +PL I ERQ+ V N L E R+ L+ + D+ER+L R
Sbjct: 291 TAMGSRLLKKWILQPLKVKKDIIERQEIVDAF--FNDRLLLNEIREYLNGIFDVERILTR 348
Query: 740 L 740
L
Sbjct: 349 L 349
>gi|407795672|ref|ZP_11142630.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
gi|407020013|gb|EKE32727.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
Length = 845
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 171/669 (25%), Positives = 285/669 (42%), Gaps = 136/669 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ-PHCGFPERN 386
+Q+ + K+ + D +FF++G FYE+F DA A+EL++ G++ P CG P +
Sbjct: 9 QQYLKIKADYKDSFLFFRLGDFYEMFFDDALKAAQELEITLTARDGGGDKIPMCGVPYHS 68
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+++L KGY++ V EQ E P+Q KG VVKRE+ ++T GT+ EG +L
Sbjct: 69 SENYIKQLVEKGYKIAVCEQVEDPKQ------AKG----VVKREVVQLITPGTVMEGSML 118
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ ++L A+ S D FG+
Sbjct: 119 EEKEN-NFLAAV--------SLLEDHSFGLSY---------------------------- 141
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLV--PLSEFWDAETTVLEIKNIYNRITA 564
A++ + ET + + + L+ +L P+ E ++ + I +
Sbjct: 142 ---------ADLTTGETSASYIGRDSHSLIGELYHQPVKE-------IVMSREIPENVQK 185
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E+ K D V+ + T +P L+ + S+ L+ + G L+ ++++ T
Sbjct: 186 EAREKLDCTVSFEEE-----THIPEDSHHLVR---NLSEELTPVFGRLY----NYINRTQ 233
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
R A L P + K YM LD + NLE+ E G+L + ++ VTA G
Sbjct: 234 KR-AMSHLQPVQY---IETKDYMRLDMYSKRNLELTETLMKKGKKGSLLSVIDSTVTAMG 289
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLL+ W+ RPL + LI++RQ+ V G N + FR+ L+ + D+ERL R+ A
Sbjct: 290 ARLLKKWIDRPLLDESLIQKRQEIVQGFMD-NFLYRDAFREDLTSVYDLERLAGRV-AFG 347
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
N ++ ++ K+ LQ+ S L SSL LE + + + P
Sbjct: 348 NINAKDMLQL-------KRSLQKVPSIL----------SSLST-LEVSVIQTFVQRMDPM 389
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDM--DYDSACKKVKEIEASLTKHLKE 862
+ L ++ H +DA + G II G + +Y A K+ A L K KE
Sbjct: 390 EELAQLLENSVH-EDAKLTI---REGNIIKSGYSESLDEYRDAQINGKKWIADLEKREKE 445
Query: 863 QRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
L G S+ + K Y +EV + VP YE + + R+ TP +K+
Sbjct: 446 ---LTGIRSLK-IKYNKVFGYFIEVTRANLTHVPERYERKQTLANAERFITPELKEKETT 501
Query: 922 LSQAES---EKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQ 978
+ QAE E E L ++ L+ + NK +Q+ + L +LQ
Sbjct: 502 ILQAEEKSIELEYELFLEIRELVKDYV---NKIQQLAKDISELD-------------VLQ 545
Query: 979 SNSCSSEMN 987
S ++EMN
Sbjct: 546 GFSYAAEMN 554
>gi|407784838|ref|ZP_11131987.1| DNA mismatch repair protein MutS [Celeribacter baekdonensis B30]
gi|407204540|gb|EKE74521.1| DNA mismatch repair protein MutS [Celeribacter baekdonensis B30]
Length = 883
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 189/424 (44%), Gaps = 91/424 (21%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERN 386
Q+ E KS+H D ++F++MG FYE+F DA ++ LD+ K + P CG P
Sbjct: 14 QYLEIKSRHRDALLFYRMGDFYEMFFDDAIAASQALDIALTKRGKHAGDDIPMCGVPFHA 73
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ L RKG++V V EQ E P K++G+K VVKR++ +VT GTLTE LL
Sbjct: 74 AETYLLNLIRKGFKVAVCEQLENPAD----AKKRGAK-AVVKRDVVRLVTPGTLTEDSLL 128
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A +YL A E A + +D++T V+ C
Sbjct: 129 DARRH-NYLAAFAEVRNEGA---------LAWIDISTGAF-----------HVMPC---- 163
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
P L PE R NP +++V +SE D L + + + +T S
Sbjct: 164 --------PLVGLGPELARL------NP--SEIV-ISEANDVNWAEL-VSDFHPNMTPLS 205
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL---KKSFLDET 623
DS A + LT L + S L + G LSA+G + YL +K L
Sbjct: 206 RASFDSTSAQKR-----LTELFRV-SSLDAFGAFSLAELSAMGAIIDYLDITQKGKL--P 257
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L+R E L + M +DA NLE+ +S SG G+L + ++ VTA
Sbjct: 258 LVRPPVRESL----------RGNMQIDAATRRNLEI-THSLSGARDGSLLSAMDRTVTAA 306
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-------FRKALSRLPDMERL 736
G RLL L+ P + +I R DA++ FA+E R AL R+PDMER
Sbjct: 307 GGRLLERRLSSPSRDVDIITARLDAIS--------FAIENPKLSEPLRDALRRVPDMERA 358
Query: 737 LARL 740
L+R+
Sbjct: 359 LSRI 362
>gi|296188728|ref|ZP_06857115.1| DNA mismatch repair protein MutS [Clostridium carboxidivorans P7]
gi|296046655|gb|EFG86102.1| DNA mismatch repair protein MutS [Clostridium carboxidivorans P7]
Length = 903
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 185/429 (43%), Gaps = 75/429 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ + K D ++FF++G FYE+F DA + +KEL+L ++ P C
Sbjct: 3 LTPMMQQYLDAKEGCKDCILFFRLGDFYEMFFEDAEIASKELELVLTGRDCGLENRAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +L KGY+V + EQ E P Q KG +VKR I V+T GT
Sbjct: 63 GIPYHAANSYISRLINKGYKVAICEQLEDPSQ------AKG----IVKRGIIKVITPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T+ L N + +Y+M+L + + C +C DV+T + D + + L
Sbjct: 113 TDASFLEENKN-NYIMSLY------LEKEKNMC-ALCFADVSTGEFNCTDM--DFNLATL 162
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+S+ P E++ N+ + I + + + LSE E +L K
Sbjct: 163 LDEISKYSPKEVLIQDNL-----DEKIQKDIKERFSSSFTSLSE----EFFILNSK---- 209
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
E L+K S + C G+L ++ T +K+ L
Sbjct: 210 ----ELLSKQFSIFKEEDYSETLIKCSNGLLKYIVET------------------QKTSL 247
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ C + ++ YM +D + NLE+ E R G+L ++
Sbjct: 248 SH----------INCFNYYNVV--DYMAIDINSRRNLELTETLRDKSKKGSLLWVMDRTN 295
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R LR W+ +PL NS I+ R D+V L N + ++AL + D+ERL+ ++
Sbjct: 296 TAMGGRQLRKWIEQPLINSSSIKLRLDSVEELLN-NLSVHEDLKEALKEIYDIERLVGKI 354
Query: 741 FASSEANGR 749
+S N +
Sbjct: 355 -SSKNVNAK 362
>gi|220932004|ref|YP_002508912.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
gi|254766630|sp|B8CX98.1|MUTS_HALOH RecName: Full=DNA mismatch repair protein MutS
gi|219993314|gb|ACL69917.1| DNA mismatch repair protein MutS [Halothermothrix orenii H 168]
Length = 896
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 185/437 (42%), Gaps = 80/437 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ- 377
+ L+ +Q+ K+K+ D ++FF++G FYE+F DA + A+ELDL GE+
Sbjct: 1 MSKLTPMMQQYQSIKNKYKDAILFFRLGDFYEMFNDDAKIAARELDLALTARNKGGGEKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + + KL KGY+V + EQ E P + KG +V RE+ ++T
Sbjct: 61 PMAGVPCHSAESYIAKLLEKGYKVAICEQIEDPSE------AKG----LVSREVVRIITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+ E E+L E+N ++ G VD++T + Q
Sbjct: 111 GTIIENEMLKDK----------ENNYLASAICYKDHLGFSYVDISTGEFYVTQFSQKFSD 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
V L ++P E+I + +L F D + ++
Sbjct: 161 KV-WDELDRIQPREVI---------------------ICKELEETENFADKKK---QMNF 195
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK- 616
+YN E + A N E L G E D + +L+A G + +LK
Sbjct: 196 VYNYSRIEKVKAA----YNFLLEHFKTNSLSGFGCE-----DKPAAILAA-GEIINFLKD 245
Query: 617 --KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
K L E + R + L YMVLD+ NLE+ R G+L
Sbjct: 246 TQKRTL-EHINRITTYNL-----------TDYMVLDSATRYNLELTSTIRGNKHKGSLLN 293
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDM 733
L+ +T+ G RL++ W+ +PL + I R DAV L VN L E R+ L + D+
Sbjct: 294 VLDQTITSMGGRLIKKWINQPLIDRNKIETRLDAVEEL--VNNYLLLQEIREHLKGIYDL 351
Query: 734 ERLLARLFASSEANGRN 750
ER+L ++ S AN R+
Sbjct: 352 ERILGKVSYGS-ANARD 367
>gi|440471625|gb|ELQ40614.1| DNA mismatch repair protein Msh3 [Magnaporthe oryzae Y34]
Length = 1151
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 154/667 (23%), Positives = 257/667 (38%), Gaps = 81/667 (12%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ E K KHMD V+ ++G + F DA + KEL + + G E P
Sbjct: 232 QFLEIKRKHMDTVLIVEVGYKFRFFGEDARIAGKELSIVCIPGKFRYDEHPSEAHLDRFA 291
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L G++V VV Q ET +K +++ R++C V TKG
Sbjct: 292 SASIPVHRLPVHAKRLVAAGHKVGVVRQIETAAL----KKAGDNRNAPFVRKLCEVYTKG 347
Query: 439 TLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
T + GE+ S YL+ LTE+ + G+ V AT II
Sbjct: 348 TYIDEMGEMDAQTGASGAHSGGYLLCLTETAAKGSGTDEKVDVGLVAVQPATGDIIYDSF 407
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAE 549
D S + L + P E++ LS TE+ + L + + + D + +
Sbjct: 408 EDGFMRSEIETRLLHISPCELLI-VGQLSKATEKLVKHLSGSASNVFGDRTRVERVAKGK 466
Query: 550 TTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALG 609
TT E + + A L K + + A D + LP V L
Sbjct: 467 TTPAEASSHVTKFYAGKL-KGSTQDDRAAALLDKVLNLP-------------EPVTLCLS 512
Query: 610 GTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS 669
+ +L + F E + K+ F + + +M ++ LE+LEV+ NS
Sbjct: 513 AMITHLTE-FGLEHIFDLTKY-------FQSFSTRSHMCINGTTLESLEVYRNSTDHTEK 564
Query: 670 GTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSR 729
G+L L+ T FG+R+LR WL RPL + + +R AV L E R
Sbjct: 565 GSLLWALDKTRTRFGQRMLRKWLGRPLLDKERLDDRVAAVEEL--------FENRNG--- 613
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH--GCELMDQACSSLGA 787
P +E+L +L +S + + S + Y + +L + L E + S
Sbjct: 614 -PQVEKL-QKLLSSIKTDLERSLIRIFYGRCTRPELLAVLQTLQRIAVEYIVVKEPSQTG 671
Query: 788 ILENTESRQLHHILTPGKGLPAIVSILKHFKDAF--DWVEANNSGRII------PHGGVD 839
N S L LP I I+ + + D N+ +
Sbjct: 672 FKSNLVSEAL-------ASLPRIREIVVSYLNRINPDAARKNDKYEFFRDESDDTGDDGE 724
Query: 840 MDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
+ + + +E L H + LG ++ YVT+ YL+EVP + VP +
Sbjct: 725 DEITTQKMSIAAVEQELDAHRSDAAATLGRKKAVDYVTVAGIEYLIEVPNTEIRKVPASW 784
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
S K R+ TP + +L+ E Q + +A + + ++ + + R V++
Sbjct: 785 AKISGTKKLSRFHTPEVVRLIAERDQHKEALAAACDAAFKAMLASIADQYQPLRDAVSSL 844
Query: 959 AGLTLIL 965
A L +L
Sbjct: 845 ATLDCLL 851
>gi|367044184|ref|XP_003652472.1| hypothetical protein THITE_2114009 [Thielavia terrestris NRRL 8126]
gi|346999734|gb|AEO66136.1| hypothetical protein THITE_2114009 [Thielavia terrestris NRRL 8126]
Length = 1171
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 162/676 (23%), Positives = 263/676 (38%), Gaps = 95/676 (14%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KHMD ++ ++G + F DA + AKEL + + G E P
Sbjct: 212 LTPMEIQFLDIKRKHMDTILVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEHPSEA 271
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P +++V++L G++V VV Q ET +K +++ R++
Sbjct: 272 HLDRFASASIPVHRLNVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLT 327
Query: 433 AVVTKGTLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSR 485
V TKGT + GEL + P YL+ LTES + GI V AT
Sbjct: 328 NVYTKGTYIDETGELDQPAEAAGAPAGGYLLCLTESAAKGSGTDEKVDVGIIAVQPATGD 387
Query: 486 IILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN-------- 537
II D + L + P E++ LS T++ +++H N
Sbjct: 388 IIFDDFEDGFMRREIETRLLHISPCELLI-VGELSKATDK-LVQHLAGSSTNVFGDRTRV 445
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
+ VP S+ AE + + +T K N S A D + LP
Sbjct: 446 ERVPKSKTMAAEAS--------SHVTQFYAGKTKDNDERSAALLDKVLKLP--------- 488
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
V L + +L + L E + K+ F + + +M+++ LE+L
Sbjct: 489 ----EAVTICLSAMITHLTEYGL-EHIFDLTKY-------FQSFSTRQHMLINGTTLESL 536
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
EV+ N+ G+L L+ T G+RLLR W+ RPL + + ER AV L +
Sbjct: 537 EVYRNATDQSEKGSLLWALDKTQTRPGRRLLRKWIGRPLLDQEQLEERVSAVEEL--LEH 594
Query: 718 PFALEFRKALSRL----PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALH 773
+ K + L D+ER L R++ K E +S L
Sbjct: 595 QSTAKVDKLVGVLSSIKADLERSLIRIY------------------YGKCTRSELLSTLQ 636
Query: 774 GCELMDQACSSLGAILENT-ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRI 832
+ + S + + +SR + + LP I I+ + D + A +
Sbjct: 637 TLQRIAVEFSRVKTPADTGFKSRLISEAIC---SLPGIGVIVNSYLDKINAQAARKDDKY 693
Query: 833 IPHGGVDMDYDSACKK--VKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPES 889
+ D K + +EA L H K+ KL T + YVT+ YL+EVP +
Sbjct: 694 AFFRDDEETEDITNHKLGIAAVEADLDAHRKDAAAKLSKKTPVNYVTVAGIEYLIEVPNT 753
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
VP + S K R+ TP + +L+ E Q +A + L+ +
Sbjct: 754 DLKHVPASWAKISGTKKLSRFHTPEVMRLMNERDQHREALAAACDAAFADLLKDIASEYQ 813
Query: 950 KWRQMVAATAGLTLIL 965
R VA+ A L +L
Sbjct: 814 PLRDAVASLATLDCLL 829
>gi|189083210|sp|Q21CE8.2|MUTS_RHOPB RecName: Full=DNA mismatch repair protein MutS
Length = 905
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 186/422 (44%), Gaps = 71/422 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHC 380
+S +Q+ E K+ + ++F++MG FYELF DA + A+ L + K + P C
Sbjct: 21 VSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIAARALGITLTKRGKHKGQDIPMC 80
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L G+RV V EQTE P R+ VV+R++ ++T GTL
Sbjct: 81 GVPVERSDDYLHRLIALGHRVAVCEQTEDPAAARARK-------SVVRRDVVRLITPGTL 133
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
TE LL A + +YL+A+ + AS DR G+ +D++T+ I+ + + L
Sbjct: 134 TEDTLLDARAN-NYLLAIARAR---ASAGADR-IGLAWIDISTAEFIVTECAP----AEL 184
Query: 501 CCLLSELRPVEIIKPANMLS-PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+ + P E I + S PE PL+ +L ++ ++++
Sbjct: 185 AATLARINPNEAIVTDALYSDPEL---------GPLLRELPAVTPL---------TRDVF 226
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ TAE VA DGL+ +S L +T A + Y+ ++
Sbjct: 227 DSATAERRLCDYFAVATM----DGLSA----MSRLEAT---------AAAACVTYIDRTQ 269
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
L + P S A M +D NLE + SG+ G+L ++
Sbjct: 270 LGKK---------PPLSPPSREATGSTMAIDPATRANLE-LTRTLSGERRGSLLDAIDCT 319
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLA 738
VTA G RLL LA PL + I +R DAVA L + P E R L PDM R LA
Sbjct: 320 VTAAGSRLLAQRLAAPLTDVEQIAQRLDAVAAL--LPDPGLREALRATLRAAPDMSRALA 377
Query: 739 RL 740
RL
Sbjct: 378 RL 379
>gi|255525225|ref|ZP_05392167.1| DNA mismatch repair protein MutS domain protein [Clostridium
carboxidivorans P7]
gi|255511088|gb|EET87386.1| DNA mismatch repair protein MutS domain protein [Clostridium
carboxidivorans P7]
Length = 379
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 184/429 (42%), Gaps = 75/429 (17%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ + K D ++FF++G FYE+F DA + +KEL+L ++ P C
Sbjct: 3 LTPMMQQYLDAKEGCKDCILFFRLGDFYEMFFEDAEIASKELELVLTGRDCGLENRAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + + +L KGY+V + EQ E P Q KG +VKR I V+T GT
Sbjct: 63 GIPYHAANSYISRLINKGYKVAICEQLEDPSQ------AKG----IVKRGIIKVITPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
T+ L N + +Y+M+L + + C +C DV+T + D + + L
Sbjct: 113 TDASFLEENKN-NYIMSLY------LEKEKNMC-ALCFADVSTGEFNCTDM--DFNLATL 162
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+S+ P E++ N+ + I + + + LSE E +L K
Sbjct: 163 LDEISKYSPKEVLIQDNL-----DEKIQKDIKERFSSSFTSLSE----EFFILNSK---- 209
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
E L+K S + C G+L ++ T + LS +
Sbjct: 210 ----ELLSKQFSIFKEEDYSETLIKCSNGLLKYIVETQKTS---LSHIN----------- 251
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
C + ++ YM +D + NLE+ E R G+L ++
Sbjct: 252 --------------CFNYYNVV--DYMAIDINSRRNLELTETLRDKSKKGSLLWVMDRTN 295
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R LR W+ +PL NS I+ R D+V L N + ++AL + D+ERL+ ++
Sbjct: 296 TAMGGRQLRKWIEQPLINSSSIKLRLDSVEELLN-NLSVHEDLKEALKEIYDIERLVGKI 354
Query: 741 FASSEANGR 749
+S N +
Sbjct: 355 -SSKNVNAK 362
>gi|269926487|ref|YP_003323110.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790147|gb|ACZ42288.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 862
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 166/657 (25%), Positives = 270/657 (41%), Gaps = 143/657 (21%)
Query: 330 GQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL----QYMKGEQ-PHCGFPE 384
++Q+ K ++ D ++FF++G FYE F+ DA + + ELD+ + ++G++ P G P
Sbjct: 5 ARQQYLRIKQQYPDAILFFRLGDFYETFDEDAKIVSSELDIVLTSREVRGKKIPMAGVPY 64
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL G++V + +Q P+ L V+R++ V+T GT+
Sbjct: 65 HAAEGYIAKLIANGHKVAICDQIGEPDGKNL-----------VERKVTRVLTPGTVDHPS 113
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCF-----GICVVDVATSRIILGQVMDDLDCSV 499
L+ A + +YLMAL CF G+ DV+T ++ +
Sbjct: 114 LIEAQRN-NYLMAL--------------CFSRGRVGLAFADVSTGDFYATEITGEDRLDK 158
Query: 500 LCCLLSELRPVEII---KPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI- 555
L ++ ++P E++ P + + E E ++ + +P A+ TVLE
Sbjct: 159 LRDEITRIQPSEVLVSEGPDKVHTSE-EHVWMKQSGHP-------------AQITVLESW 204
Query: 556 --KNIYNRITAESLNKADSNVANSQAEGDGLTCLP------GILSELISTGDSGSQVLSA 607
K R + SL A S E GL +P G L + IS D+ LS
Sbjct: 205 KWKTDVARDSVLSLTDAQS------LEAFGLDSMPVALKSAGALVQYIS--DTNPAALST 256
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L Y +F M LD NLE+ E++R GD
Sbjct: 257 LRPPSTYFLSNF---------------------------MPLDDRTRRNLELIESTR-GD 288
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKA 726
S +L A L+H TA G R+LR W+ +PL + I R + V V A E R+A
Sbjct: 289 KSLSLLAVLDHTSTAMGARMLRNWINQPLISKESIENRLNRVQEF--VAHSEARERIREA 346
Query: 727 LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
L ++ D+ERL RL + R + L + +++ E + L C + Q
Sbjct: 347 LKQVSDLERLANRLVQKT-ITPRELRSLAL----SLEKIPELVQILQQCNMQLQVS---- 397
Query: 787 AILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG-GVDMD-YDS 844
HI+ IL D D SG II G ++D S
Sbjct: 398 -------IHNFQHIVD---------LILSALVD--DPPAVRGSGTIIREGYSQELDRLRS 439
Query: 845 ACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELR 901
A K+ ASL + +E T I + IG + Y +EV S + VP Y +
Sbjct: 440 ASTNAKQWIASLERKEREA------TGIKNLRIGYNKVFGYYIEVTNSFKHLVPDRYIRK 493
Query: 902 SSKKGFFRYWTPNIKK----LLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQM 954
+ G R+ TP +K+ +L ++AE+ +E L ++ R+ G+ + + RQ+
Sbjct: 494 QTLVGAERFITPELKEYESLILNSQTEAETIEEQLLDELITRIAGEAGKIFSTARQI 550
>gi|347530202|ref|YP_004836950.1| DNA mismatch repair protein MutS [Sphingobium sp. SYK-6]
gi|345138884|dbj|BAK68493.1| DNA mismatch repair protein MutS [Sphingobium sp. SYK-6]
Length = 887
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 157/576 (27%), Positives = 241/576 (41%), Gaps = 131/576 (22%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ-----PHCGFPERN 386
Q+ K++ ++F++MG F+ELF DA V A+ LD+ +GE P CG P +
Sbjct: 30 QYLALKAEAGGDLLFYRMGDFFELFFDDAKVAAQALDIALTTRGEHLGEPIPMCGVPVHS 89
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L R G+RV + EQTETPEQ + +GSK +V R I VT GTLTE LL
Sbjct: 90 ADSYLARLIRAGHRVAIAEQTETPEQA----RARGSK-ALVGRAIVRFVTAGTLTEEALL 144
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ A+ L A+ ES + A + D++T R+ +V+ L+ + + L+
Sbjct: 145 DSR-RANLLAAVGESGGAKA---------VAAADISTGRL---EVV-TLEGNAIEAELAR 190
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPL-----SEFWDAETTVLEIKNIYNR 561
L E+I P + + +P S +D+ I+ +
Sbjct: 191 LGASEVIA------------------RPGLAESIPAAMPFESRSFDSARAEEHIRRHFGV 232
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
T ES A S+AE LSALGG L YL+ +
Sbjct: 233 TTLESFG------AFSRAE------------------------LSALGGLLAYLEH--VG 260
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ + F + SG ++ +D E+LE+ + ++SG +G+L A ++ VT
Sbjct: 261 KGRMPFLAAPVRLGSG-------AHLAIDPATRESLEIVQ-TQSGQRAGSLLAAVDRTVT 312
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
G RLL L+ PL N I R V + P + R L LPD+ R L R+
Sbjct: 313 GAGARLLAADLSAPLMNREAIEARLSLVQWFHD-DGPLREDVRARLRALPDVGRALGRI- 370
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
A GR S + + QL++ + A H S A+L++ L H
Sbjct: 371 ----AIGRGSPRDL-------GQLRDGLDAAHRLRERLGRLPSRPALLDDL----LPHFD 415
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE-------A 854
G+ ++ ILK A EA N G I YD+A +++ + A
Sbjct: 416 GHGE----LIDILKRAIVAAPPTEAANGGYIAE------GYDAALDELRRLAGDGRRAIA 465
Query: 855 SLTKHLKEQRKLLGDTSITYVTI---GKDLYLLEVP 887
SL +E+ T I + I G Y +EVP
Sbjct: 466 SLEARYREE------TGIAALKIRHNGVLGYHVEVP 495
>gi|225630016|ref|YP_002726807.1| DNA mismatch repair protein MutS [Wolbachia sp. wRi]
gi|254766648|sp|C0R5H4.1|MUTS_WOLWR RecName: Full=DNA mismatch repair protein MutS
gi|225591997|gb|ACN95016.1| DNA mismatch repair protein MutS [Wolbachia sp. wRi]
Length = 854
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 201/453 (44%), Gaps = 81/453 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ K+++ D ++F+++G FYELF DA AK L++ K + P CG P
Sbjct: 31 EQYLNLKAQYKDHLLFYRLGDFYELFFDDAIKAAKLLNIVLTKRGNSCGQDIPMCGVPAH 90
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL G++V + +Q ET ++ K++G K +VKR++ VVT GT+ E L
Sbjct: 91 SSESYLHKLIDLGFKVAICDQLETADE----AKKRGYKS-IVKRDVVRVVTPGTIIEDSL 145
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCLL 504
L + +YL ++ E N + I ++++T + + LD +L
Sbjct: 146 LEDKSN-NYLASIVEQNDE---------YAISWLELSTGKFFHTLTSLKALDSDLL---- 191
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P E++ E R++L++ + + E+ + T+ E I
Sbjct: 192 -RISPRELLISEKFTEDEKIRSVLKNYKISITQHAQSFFEYSKSHRTLCEFYKI------ 244
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
EL S G+ + A G L Y+
Sbjct: 245 ---------------------------RELGSIGNFSKVEIMACGALLEYV--------- 268
Query: 625 LRFAKFELLPCSGFGDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
R + +P F K+ +M++DA A NLE+F +++ G+ G+L + ++H VTA
Sbjct: 269 -RVTQRGSIPRLEFPKTYKQQNFMLIDASARRNLELF-STQFGEKKGSLISVIDHTVTAS 326
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL+ LA PL S I R ++P + R+ LS +PD+ER L+RL
Sbjct: 327 GGRLLKQMLASPLACSKAINLRLSTAQFFVNNHEP-RRKIREILSNIPDIERSLSRLIL- 384
Query: 744 SEANGRNSNK-VVLYEDAAKK--QLQEFISALH 773
GR S K + L + K +L EF+S LH
Sbjct: 385 ----GRGSPKDMNLLKIGLGKTLELSEFLSTLH 413
>gi|398943003|ref|ZP_10670641.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM41(2012)]
gi|398159934|gb|EJM48220.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM41(2012)]
Length = 859
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 152/632 (24%), Positives = 263/632 (41%), Gaps = 124/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W K++H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 16 QQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQAIPMCGIPYH 75
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V++ EQ P KG D R++ ++T GT+++ L
Sbjct: 76 AAEGYLAKLVKLGESVVICEQVGDPA------TSKGPVD----RQVVRIITPGTVSDEAL 125
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + V++ L L
Sbjct: 126 LDERRD----------NLIAAVLGDERLFGLAVLDITSGNF---TVLEIKGWENLLAELE 172
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
+ PVE++ P + L E R + R R P WD E +K++ +
Sbjct: 173 RVNPVELMIPDDWPKDLPAEKRRGVRR--RAP-----------WDFERDS-ALKSLCQQF 218
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
+ + L G C ++ + + A G L Y K++
Sbjct: 219 STQDLK--------------GFGC------------ENLTLAIGAAGCLLSYAKETQRTA 252
Query: 623 T-LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
LR + E L + +VLD + NLE + + +G TL + ++ C T
Sbjct: 253 LPHLRSLRHERLDDT----------VVLDGASRRNLE-LDTNLAGGRDNTLQSVVDRCQT 301
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ ++ L ++ + + L + D+ER+LAR+
Sbjct: 302 AMGSRLLTRWLNRPLRDLTVLLARQTSITCL--LDGYRFEKLQPQLKEIGDIERILARI- 358
Query: 742 ASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHIL 801
RN+ D A+ L++ + AL L + E+ + +
Sbjct: 359 -----GLRNARP----RDLAR--LRDALGAL----------PELQVAMTELEAPHIIQLA 397
Query: 802 TPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL 860
P + ++L+ K D N +I GGV YD+ ++ + + + L
Sbjct: 398 KTTSTYPELAALLE--KAIID-----NPPAVIRDGGVLKTGYDAELDDLQSLSENAGQFL 450
Query: 861 KE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
+ + + T ++++ +G + Y +E+P S P DY R + KG R+ TP +K
Sbjct: 451 IDLEAREKARTGLSHLKVGYNRIHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELK 510
Query: 917 ----KLLGELSQAESEKESALKSILQRLIGQF 944
K L S+A + ++ +++L+ LI Q
Sbjct: 511 AFEDKALSAKSRALAREKMLYEALLEDLISQL 542
>gi|337294298|emb|CCB92281.1| DNA mismatch repair protein mutS [Waddlia chondrophila 2032/99]
Length = 842
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 163/658 (24%), Positives = 270/658 (41%), Gaps = 114/658 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMNV 391
QW K K ++FF+MG FYE F DA V AKEL+L + E P G P +
Sbjct: 14 QWHACKKKAGTALLFFRMGDFYEAFYDDAIVLAKELELTLTTRQEIPMAGVPHHTCDTYI 73
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
++L KG+R+ V EQT P + KG +V+R++ +VT GTL LLS N +
Sbjct: 74 DRLVAKGFRIAVAEQTSDP------KTSKG----LVERDVTRIVTPGTLVNSSLLSENAN 123
Query: 452 ASYLMALTESNQSPASQSTDRCFGICVVDVATS--RIILGQVMDDLDCSVLCCLLSELRP 509
+Y ++T+ G+ +D+ T+ R++ + +L L L+P
Sbjct: 124 -NYFASVTQVGS---------VLGLAFLDLTTADFRVVEFESEQELQGE-----LYRLQP 168
Query: 510 VEIIKPANMLSPETER-AILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
E++ A L+H+ N L+N + W E ++IT E L
Sbjct: 169 SELLTSKKFSDKHALLIADLQHSLNLLINT----EDDWRFE----------HQITTEFL- 213
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
S++ +G GL + ++A G L YL+ +
Sbjct: 214 --ISHLKVHTLDGFGLKGMAA--------------GINASGALLHYLRDTL--------- 248
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
+ + + YM LD NLE+ + + G TL + L+ T G RL+
Sbjct: 249 NLSIDHINTISTYSTNEYMTLDRMTQTNLELTRSLQDGTRKHTLLSILDQTCTPMGGRLI 308
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLARLFASSEAN 747
WL RPL I+ RQDAV + + + + + +L + D+ERL+ ++
Sbjct: 309 LQWLKRPLLCMKTIQARQDAVQSF--IERDWTHDQLKASLEDVRDIERLMMKV------- 359
Query: 748 GRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGL 807
++N + AA + E + + A SSL T +QL+ L
Sbjct: 360 --SANYASPKDIAALRHSIEPLGKIKSLLREPAAASSLI----QTHEKQLN-------PL 406
Query: 808 PAIVSILKH-FKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE-QRK 865
P ++S++ + D + + + G I G + +++EI A+ L Q K
Sbjct: 407 PELISLIANALVD--EPPQKLSDGNIFRKG-----FHQELDEIREISANSKSWLNNYQNK 459
Query: 866 LLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
L + I + +G + Y +EV + G VP +E R + R+ T ++K E
Sbjct: 460 LREELDIKNLKVGFNRMFGYYIEVSKGQAGKVPESFERRQTLVNAERFITKDLK----EY 515
Query: 923 SQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATA-GLTLI-----LLDGSLLHAF 974
Q E + SI Q L Q ++ +V TA L +I L + + LH +
Sbjct: 516 EQKVLTAEEKISSIEQELFQQLRTEVTRYADIVIKTAQSLAIIDCLQALAEAARLHGY 573
>gi|167765541|ref|ZP_02437605.1| hypothetical protein CLOSS21_00035 [Clostridium sp. SS2/1]
gi|167712726|gb|EDS23305.1| DNA mismatch repair protein MutS [Clostridium sp. SS2/1]
Length = 875
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 190/437 (43%), Gaps = 85/437 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ + K ++ D ++F+++G FYE+F DA +KEL++ ++ P C
Sbjct: 7 LTPMMQQYMQIKEENKDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPMC 66
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY+V + EQ E P Q KG +VKREI +VT GT
Sbjct: 67 GVPYHAVDSYLNKLVEKGYKVGICEQVEDPSQ------AKG----IVKREIVRIVTPGTN 116
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI------ILGQVMDD 494
+ L + +YLM + + D +GI VDV T L +V D+
Sbjct: 117 ISQQSLDDEKN-NYLMCIF---------ANDGSYGISFVDVTTGDFRTTAMDSLAKVRDE 166
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ + P EII L + L+ + +++ + P +D E
Sbjct: 167 I---------FKFEPAEIICNDAFLISGMDFDYLKDKMSIVISSIEPYH--FDEEQ---- 211
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
AE K V N EG GL P +I+TG AL G L
Sbjct: 212 ---------AEERIKRQFKVGN--LEGLGLVDHP---MGVIATG--------ALLGYLHE 249
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+KS LD L+ +E +M++D+ + NLE+ E R G+L
Sbjct: 250 TQKSSLDH-LMHIEAYE-----------TSEFMIIDSSSRRNLELCETLRDKQKKGSLLW 297
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDM 733
L+ TA G R+LR + +PL + I ER DAV L +Q E R+ L+ + D+
Sbjct: 298 VLDKTKTAMGARMLRNMVEQPLVDKKKIEERYDAVTTL--TDQTIVREELREYLNPIYDL 355
Query: 734 ERLLARLFASSEANGRN 750
ERL+ ++ + AN R+
Sbjct: 356 ERLMTKV-SYKTANPRD 371
>gi|37524723|ref|NP_928067.1| DNA mismatch repair protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|44888166|sp|Q7N8K0.1|MUTS_PHOLL RecName: Full=DNA mismatch repair protein MutS
gi|36784148|emb|CAE13017.1| DNA mismatch repair protein MutS [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 851
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 173/416 (41%), Gaps = 82/416 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ K++H D ++F++MG FYELF DA AK LD+ K Q P G P
Sbjct: 15 QQYLRLKAQHPDILLFYRMGDFYELFYDDAKKAAKLLDISLTKRGQSAGNPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AVENYLAKLVQLGESVAICEQIGDPA------TSKGP----VERKVVRIVTPGTVTDEAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D + L A+ NQ FG +DV + R Q+ + ++ + L
Sbjct: 125 LQERQD-NLLAAIWHDNQG---------FGYATLDVTSGRF---QISEMIELETIAAELQ 171
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
RPVE++ P + R PL W+ E
Sbjct: 172 RSRPVELLYPESFEHMALIENFHGLRRRPL----------WEFE---------------- 205
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTG-DSGSQVLSALGGTLFYLKKSFLDETL 624
L+ A + D L+ G D + L A G L Y+K +
Sbjct: 206 -LDTAKQQLNLQFGTRD-----------LVGFGVDKATLALRAAGCLLQYVKDT------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ L G ++ +++DA NLE+ +N SG + TL + L+ CVT G
Sbjct: 248 ---QRTALPHIRGITMERQQDTVIMDAATRRNLELTQN-LSGSTDNTLASVLDLCVTPMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
R+L+ WL P+ + ++ RQ A+A L Q LE + L ++ D+ER+LARL
Sbjct: 304 SRMLKRWLHAPVRDRQILENRQQAIATL----QEIGLELQPFLLQIGDLERVLARL 355
>gi|302386431|ref|YP_003822253.1| DNA mismatch repair protein MutS [Clostridium saccharolyticum WM1]
gi|302197059|gb|ADL04630.1| DNA mismatch repair protein MutS [Clostridium saccharolyticum WM1]
Length = 884
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 188/428 (43%), Gaps = 80/428 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------Q 377
+ LS + E K ++ D ++F+++G FYE+F DA +KEL++ E
Sbjct: 1 MAGLSPMMTHYMETKKEYPDCILFYRLGDFYEMFFDDAVTVSKELEITLTGKECGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + +L +KGY+V + EQ E P R KG +VKRE+ VVT
Sbjct: 61 PMCGVPYHAVDTYLNRLVQKGYKVAIAEQMEDP------RLAKG----LVKREVIRVVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+T + L + + +YLM + ++ FGI V D++T ++ +V
Sbjct: 111 GTITSAQALDESKN-NYLMGIVYIGET---------FGIAVADISTGDFLVTEV------ 154
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
E+ER + ++++ F+ + + EIKN
Sbjct: 155 ------------------------ESERELTDEINKFTPSEIICNEAFYVSGVDIEEIKN 190
Query: 558 IYNRITAESLNK---ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
++ + + SL+ +D E + L G+ E D + V++A G + Y
Sbjct: 191 RHHAVIS-SLDHHFFSDEVCRKILKEHFKVGALAGLGLE-----DYDNGVIAA-GAVMEY 243
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+ ++ K L + + YM++D NLE+ E R G+L
Sbjct: 244 MYET---------QKSSLSHITTITPYSTGQYMIIDTSTRRNLELLETLREKQKRGSLLW 294
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPD 732
L+ TA G R+LRT++ +PL + I +RQ+A+ L N F E + L+ + D
Sbjct: 295 VLDRTKTAMGARMLRTYIEQPLIHKPEITKRQNAIEEL---NMSFISREEICEYLNPIYD 351
Query: 733 MERLLARL 740
+ERL+ R+
Sbjct: 352 LERLIGRI 359
>gi|157827459|ref|YP_001496523.1| DNA mismatch repair protein MutS [Rickettsia bellii OSU 85-389]
gi|166232130|sp|A8GX86.1|MUTS_RICB8 RecName: Full=DNA mismatch repair protein MutS
gi|157802763|gb|ABV79486.1| DNA mismatch repair protein [Rickettsia bellii OSU 85-389]
Length = 888
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 178/415 (42%), Gaps = 66/415 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K E P CG P
Sbjct: 20 QQYLDIKFAHLDCLLLFRMGDFYEMFYEDAVLASGVLGIALTKRGKNGDEEVPMCGVPYH 79
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + Y+V + +Q ETPE+ K +G VV R + ++T GT+ E L
Sbjct: 80 ALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVNRNVTRIITPGTVIEENL 135
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
++ + +YL +L P ++ T +C D++TS I + V + L
Sbjct: 136 ITT-AEPNYLASLV----VPKNKDTA---ALCYADLSTSTIFVVNVPE----------LE 177
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L + +KP +L E R+ +DL NI ++
Sbjct: 178 ILNELARLKPREILLSEHLRS----------SDLAS---------------NISKQLNFR 212
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ DS A ++ E L + ++ G+ + + A+G L YL TL
Sbjct: 213 ITYQVDSFFAVNKCEKIILDFYK--MKDIKGVGEISNSQICAIGSILEYL-------TLT 263
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ LP D YM +D NLE+ NS G + G+L + LNH VT G
Sbjct: 264 QKENIPNLPKPKIIDF--HSYMTIDFSTRRNLEIVTNS-CGGNKGSLLSTLNHTVTKQGG 320
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
RLL +L+ PL ++ I +R + N + R+ L + D+ER L R+
Sbjct: 321 RLLYNFLSSPLTDTHKINQRLNITEFFHS-NLDITAKVRELLKKTSDIERCLTRI 374
>gi|430001963|emb|CCF17743.1| DNA mismatch repair protein mutS [Rhizobium sp.]
Length = 911
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 187/417 (44%), Gaps = 69/417 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHCGFPER 385
+Q+ E K+ + D ++F++MG FYELF DA ++ L + Q+M + P CG P
Sbjct: 31 EQYIEIKANNPDSLLFYRMGDFYELFFEDAVEASRALGITLTRRGQHMGQDIPMCGVPIH 90
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL G+RV V EQ E P + K++GSK VVKR++ +VT GTLTE +L
Sbjct: 91 AADDYLQKLISLGFRVAVCEQVEDPAEA----KKRGSK-SVVKRDVVRLVTPGTLTEEKL 145
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
LS + +++YLMAL Q + +D++T L + D S L +
Sbjct: 146 LSPS-ESNYLMALARIRGGADPQ-----LALAWIDISTGVFRLAET----DQSRLLADIL 195
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P E+I P M F DA E+K +++ +
Sbjct: 196 RIDPRELIVPDTM--------------------------FHDA-----ELKPVFDVLGKV 224
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
++ + ++ AEG + L G L+A + Y++K+ + E
Sbjct: 225 AVPQPGVLFDSASAEGRIARYFS--VGTLDGFGSFSRAELAAAAAAVAYVEKTQISER-- 280
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALE-NLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
P G + +L PA NLE+ + SGD GTL ++ VT G
Sbjct: 281 --------PPLGIPERESAASTLLIDPATRGNLEL-TRTLSGDRDGTLLKAIDRTVTGGG 331
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARL 740
RLL L PL + I R D+++ L +++P E R AL +PDM R L+RL
Sbjct: 332 ARLLAERLMSPLTDPVQINRRLDSISFL--IDEPSLCSELRTALQHVPDMPRALSRL 386
>gi|115522274|ref|YP_779185.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris
BisA53]
gi|122298027|sp|Q07V29.1|MUTS_RHOP5 RecName: Full=DNA mismatch repair protein MutS
gi|115516221|gb|ABJ04205.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris
BisA53]
Length = 906
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/431 (28%), Positives = 188/431 (43%), Gaps = 75/431 (17%)
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQ- 377
P + L +S +Q+ E K+ + ++F++MG FYELF DA + A+ L + K G+
Sbjct: 16 PAEALTRVSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIAARALGITLTKRGKHK 75
Query: 378 ----PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
P CG P + +L G+RV V EQTE P R+ VV+R++
Sbjct: 76 GQDIPMCGVPVERSDDYLHRLIALGHRVAVCEQTEDPAAARARK-------SVVRRDVVR 128
Query: 434 VVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
++T GTLTE LL A + +YL+A+ S DR G+ +D++T+ I+ +
Sbjct: 129 LITPGTLTEDTLLDARTN-NYLLAIARVR---GSTGGDR-LGLAWIDISTAEFIVTE--- 180
Query: 494 DLDCSV--LCCLLSELRPVEIIKPANMLS-PETERAILRHTRNPLVNDLVPLSEFWDAET 550
C++ L L+ + P E I + S PE PL+ +L ++
Sbjct: 181 ---CALGELAATLARINPNEAIVTDALYSDPEL---------GPLLRELAAVTPL----- 223
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
+++++ TAE VA DGL +S L +T A
Sbjct: 224 ----TRDVFDSATAERRLCDYFAVATM----DGLAA----MSRLEAT---------AAAA 262
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
+ Y++++ L + P S M +D NLE + +G+ G
Sbjct: 263 CITYVERTQLGQK---------PPLSPPSREIAGATMAIDPATRANLE-LTRTLAGERRG 312
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSR 729
+L ++ VTA G RLL LA PL ++G I R DAV V P + R L
Sbjct: 313 SLLDAIDCTVTAAGSRLLAQRLAAPLTDAGAIAHRLDAVEAF--VADPILRDGLRATLRA 370
Query: 730 LPDMERLLARL 740
PD+ R LARL
Sbjct: 371 APDLARALARL 381
>gi|423071724|ref|ZP_17060497.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0413]
gi|355363498|gb|EHG11235.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0413]
Length = 852
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 151/633 (23%), Positives = 254/633 (40%), Gaps = 139/633 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSEKPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT
Sbjct: 66 GVPYHSVQQYIDVLIESGYKVAIAEQVEDP------KKAVG----VVKREVVQVITPGTA 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A + +G+ +DV T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLEDFYGLAYMDVVTGEF---QVTTLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE E +L + N L
Sbjct: 162 CGEIRNLRAREVVLGYEL--PEAEHQVLANQMNLL------------------------- 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L++ ++ + Q GD L+ L G L Y+ ++ L
Sbjct: 195 ------LSQVETAFEDVQLLGDDLSRLE----------------YQVAGKLLEYVHQTQL 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L R +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 233 RELSHLKRVHHYEI-----------KDFLQMDYATMTSLDLTENARTGKKHGSLYWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ PL + I +RQD V Q F F + +L + D
Sbjct: 282 TKTAMGTRLLRRWIQHPLLDKERILKRQDVV-------QVFLDHFFERSDLADSLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R+ + G+ + K +L A + + L G + LG ++EN
Sbjct: 335 IERLASRV-----SFGKTNPKDLLQLAATLSNVPQIKGILQGID-----HPVLGQLIENL 384
Query: 793 E-----SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ + + + P P +++ + FD E + R++ G D
Sbjct: 385 DDIPELANLIQSAIYPDA--PNVITEGNIIQTGFD--ETLDKYRVVLRDGTSWIADI--- 437
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ KE AS +LK I Y KD Y V S VP + +++ K
Sbjct: 438 EAKEKAASGINNLK----------IDYNK--KDGYYFHVTNSQLEHVPSHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRL 940
R+ T + ++ GE+ +A + + I R+
Sbjct: 486 ERFGTEELARIEGEMLEAREKSANLEYEIFIRI 518
>gi|85713673|ref|ZP_01044663.1| MutS 1 protein [Nitrobacter sp. Nb-311A]
gi|85699577|gb|EAQ37444.1| MutS 1 protein [Nitrobacter sp. Nb-311A]
Length = 908
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 182/415 (43%), Gaps = 65/415 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K+ + ++F++MG FYELF DA + ++ L + K + P CG P
Sbjct: 27 EQYLEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHQGADIPMCGVPVE 86
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L G+RV V EQTE P +++G+K VV+R++ +VT GTLTE L
Sbjct: 87 RSDDYLHRLIAAGHRVAVCEQTEDPSAA----RKRGNK-SVVRRDVIRLVTPGTLTEDTL 141
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A + +YL+AL + AS DR F + +D++T+ ++ + S L L+
Sbjct: 142 LDARAN-NYLLALARAR---ASSDADR-FALAWIDISTAEFMVTEC----GASELAATLA 192
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P E+I + +LR + + PL+ +++++ TAE
Sbjct: 193 RINPNEVIVSDALHGDPGLNVLLRE-----LPSVTPLT------------RDVFDGATAE 235
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
VA DGL+ +S L T +++D T +
Sbjct: 236 QRLCDYFAVATM----DGLSA------------------MSRLEATAAAAAVTYIDRTQI 273
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ P S A M +D NLE + +G+ G+L ++ TA G
Sbjct: 274 ----GQRPPLSPPSREASGSTMAIDPATRANLE-LTRTLAGERRGSLLDAIDRTTTAAGS 328
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
RLL LA PL ++ I R DAVA N + R L PDM R LARL
Sbjct: 329 RLLAQRLAAPLTDTAAITRRLDAVAAFTSDNTARD-DIRAILRTAPDMSRALARL 382
>gi|417752051|ref|ZP_12400291.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333772185|gb|EGL49058.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 851
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 155/653 (23%), Positives = 265/653 (40%), Gaps = 129/653 (19%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PH 379
N+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 5 NISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYDDAVKAAQLLEIGLTSRNKNAENPIPM 64
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + ++ L GY+V V EQ E P+Q VVKRE+ V+T GT
Sbjct: 65 AGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQ----------AVGVVKREVVQVITPGT 114
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ + SA PD++ +N A C+G+ +DV+T V D D +
Sbjct: 115 VVD----SAKPDSA-------NNFLVAVDFDGCCYGLAYMDVSTGEFC---VTDLADFTS 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + L+ E++ ++ E E+ IL N L++ E TV E K++
Sbjct: 161 VRSEIQNLKAKEVLLGFDL--SEEEQTILVKQMNLLLS----------YEETVYEDKSLI 208
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
+ G + L+A G L Y+ K+
Sbjct: 209 D-------------------------------------GQLTTVELTAAGKLLQYVHKTQ 231
Query: 620 LDET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ E L +E+ K Y+ + +L++ EN+R+ G+LY L+
Sbjct: 232 MRELSHLQALVHYEI-----------KDYLQMSYATKSSLDLVENARTNKKHGSLYWLLD 280
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF------RKALSRLP 731
TA G RLLR+W+ RPL + I ERQ+ + Q F F +L +
Sbjct: 281 ETKTAMGMRLLRSWIDRPLVSKEAILERQEII-------QVFLNAFIERTDLSNSLKGVY 333
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILEN 791
D+ERL +R+ + G+ + K +L QL ++ + + AILE+
Sbjct: 334 DIERLSSRV-----SFGKANPKDLL-------QLGHTLAQV----------PYIKAILES 371
Query: 792 TESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKE 851
S + ++ LP + +++ D D + G II G D D K ++E
Sbjct: 372 FNSAYVDKLVNDIDSLPELEYLIRTAIDP-DAPATISEGSII-RNGFDERLDHYRKVMRE 429
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ ++R+ G ++ KD Y V S VP + +++ K RY
Sbjct: 430 GTGWIADIEAKERQASGINNLKIDYNKKDGYYFHVTNSNLSLVPDHFFRKATLKNSERYG 489
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
T + K+ G++ +A E S I + Q + N+ +++ A + ++
Sbjct: 490 TAELAKIEGQMLEAREESSSLEYDIFMCIRAQVETYINRLQKLAKTLATVDVL 542
>gi|134080992|emb|CAK41506.1| unnamed protein product [Aspergillus niger]
Length = 1104
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 145/658 (22%), Positives = 269/658 (40%), Gaps = 65/658 (9%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERN 386
L+ +KQ + K KHMD V+ ++G + F DA V AKEL + P
Sbjct: 207 LTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARVAAKELSIVSHLDRFASASIPVHR 266
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT-LTEGEL 445
++V++L G++V VV Q ET + +++ R++ + TKGT + + E
Sbjct: 267 LHVHVKRLVAAGHKVGVVRQIETAA----LKAAGDNRNAPFVRKLTNLYTKGTYIDDAEG 322
Query: 446 LS---------ANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLD 496
L A+P YL+ +TE+N GI V AT I+ D
Sbjct: 323 LGGPMPAASGGASPATGYLLCITETNAKGWGNDEKVQVGIVAVQPATGDIVYDDFEDGFM 382
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDAETTVLE 554
S + L + P E++ LS TE+ + L ++ + D + ++T E
Sbjct: 383 RSEIETRLLHIAPCELLIVGE-LSKATEKLVQHLSGSKLNVFGDKTRVERVLKSKTAAAE 441
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
+ + A + A + + +L ++++ + QV L + +
Sbjct: 442 SHSHVSSFYAGKMKTASAADDAQASS---------LLQKVLNLPE---QVTICLSSMIEH 489
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+K+ L E + K+ F + + +M+L+ L +LE+++N + G+L+
Sbjct: 490 MKEYGL-EYVFELTKY-------FQHFSSRSHMLLNGNTLMSLEIYQNQTDHTTKGSLFW 541
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SRLPD 732
L+ T FG+R+LR W+ RPL + + ER +AV L+ + +E K L D
Sbjct: 542 TLDRTQTRFGQRMLRKWVGRPLLDKSRLEERVNAVEELKNPEKTVMVERLKGLLGKVKSD 601
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+E+ L R++ K E ++ L +++ Q S + + +
Sbjct: 602 LEKSLIRIY------------------YGKCTRPELLTVLQTMQMIAQEFSDVKSPADTG 643
Query: 793 -ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK--V 849
S ++ +T LP I+ + F D + A + + + D + +K +
Sbjct: 644 FASTAINEAIT---CLPTILEDVVAFLDKINMHAAKSDDKYAFFREAEETEDISDQKLGI 700
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRG--SVPRDYELRSSKKGF 907
+E L +H + LG ++ Y ++ YL+EV S VP + S K
Sbjct: 701 ASVEHELEEHRSVAGQKLGKKTVEYKSVAGIDYLIEVENSSASIKRVPASWVKVSGTKKV 760
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ TP + +L+ + Q + +A L+ + +R V A A L ++
Sbjct: 761 SRFHTPEVIQLMRQRDQHKEALAAACDQAFISLLADIATKYQPFRDSVQALATLDCLI 818
>gi|339640062|ref|ZP_08661506.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453331|gb|EGP65946.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 056
str. F0418]
Length = 841
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 155/667 (23%), Positives = 272/667 (40%), Gaps = 134/667 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYQDAFLLFRMGDFYELFYEDAVNAAQILEIAITSRNKNSENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDTLVESGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ ++ + ++L++L E Q +G+ +D+AT QV D
Sbjct: 116 VDSS--KSSGENNFLVSLDREEGQ----------YGLAYMDLATGEF---QVTTLADFDQ 160
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
C + L+ E++ + PE+E +L + N L
Sbjct: 161 ACGEIRNLQAREVVVGYAL--PESEEKVLSNQMNLL------------------------ 194
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
L++ + + + Q GD L+ L + G L + +
Sbjct: 195 -------LSRVEDVLEDVQLLGDELSPLE-----------------KRVAGKLLH----Y 226
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ +T +R EL K ++ +D +L++ EN+R+G G+L+ ++
Sbjct: 227 VFQTQMR----ELSHLKKVHHYEIKDFLQMDYATKTSLDLIENARTGKKHGSLFWLMDEA 282
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDM 733
TA G RLLR+W+ PL + I +RQD V Q F F + +L + D+
Sbjct: 283 KTAMGGRLLRSWIQHPLIDKDRITKRQDVV-------QVFLDSFFERSDLSDSLRGVYDI 335
Query: 734 ERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE 793
ERL +R+ + G+ + K +L QL +S + AILEN
Sbjct: 336 ERLASRV-----SFGKTNPKDLL-------QLASTLS----------HVPQIRAILENIA 373
Query: 794 SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIE 853
S L +++ +P + +++ D + G II G D D ++E
Sbjct: 374 SPALETLVSKLDAIPELENLISSAISP-DASQVITEGNII-QSGFDETLDKYRLVMREGT 431
Query: 854 ASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ + ++R G +++ KD Y V S G VP + +++ K RY T
Sbjct: 432 SWIADIEAKERATSGISNLKIDYNKKDGYYFHVTNSQLGHVPSHFFRKATLKNSERYGTE 491
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHA 973
+ ++ GE+ +A + + I R+ E K+ + + A A TL +D +L +
Sbjct: 492 ELARIEGEMLEAREKSANLEYEIFMRI----REEAGKYIKRLQALAQ-TLATID--VLQS 544
Query: 974 FLILQSN 980
F ++ N
Sbjct: 545 FAVVAEN 551
>gi|302380515|ref|ZP_07268980.1| DNA mismatch repair protein MutS [Finegoldia magna ACS-171-V-Col3]
gi|302311458|gb|EFK93474.1| DNA mismatch repair protein MutS [Finegoldia magna ACS-171-V-Col3]
Length = 856
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 191/429 (44%), Gaps = 88/429 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQ---PHCGFPER 385
KQ+ E K ++ D ++FF++G FYE+F DA + +KEL++ + GE P CG P
Sbjct: 8 KQYKEIKEQNKDCILFFRLGDFYEMFFDDALIASKELEIVLTQRDCGENKKCPMCGIPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL KGY+V + EQ E P+ + KG +VKR I + T T+ E E
Sbjct: 68 VSEVYINKLVSKGYKVAICEQLEDPKLV------KG----LVKRGIIKIYTPATVIENE- 116
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S + +YLM++++ + A I +D++T + D ++ +S
Sbjct: 117 NSDTGNFNYLMSISKKSNEVA---------ISYIDISTGDVSYTNTTSDDIYKIIENEIS 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE----IKNIYNR 561
++ P EII + S + I S+F TTV I I ++
Sbjct: 168 KITPKEIIFNDHEFSTNSLETI--------------ASKFSIVLTTVNNGTDSIDFINSK 213
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
IT ++ N +N+ C+ +L + D + S+ +K +++
Sbjct: 214 ITYDNTNSETTNI-----------CVANLLKYVFRYQDDLVHINSS--------RKYYIN 254
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
E +M +D+ ++ NLE+ +N + +G+L+ LNH T
Sbjct: 255 E-----------------------FMEIDSNSVINLEIQKNLYTNSKNGSLFGVLNHTKT 291
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
+ G RLL ++L RPL + I RQ+ V + + + L + D++RL+A+L
Sbjct: 292 SMGSRLLHSYLERPLMDKAEILIRQNRVEEIFE-DYELLVNLENCLDGIYDLDRLIAKLS 350
Query: 742 ASSEANGRN 750
S AN ++
Sbjct: 351 YKS-ANAKD 358
>gi|217077343|ref|YP_002335061.1| DNA mismatch repair protein MutS [Thermosipho africanus TCF52B]
gi|217037198|gb|ACJ75720.1| DNA mismatch repair protein MutS [Thermosipho africanus TCF52B]
Length = 817
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 180/421 (42%), Gaps = 87/421 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ-PHCGF 382
++NL+ KQ+ + K + D ++ F++G FYE F DA + +K L++ K + P G
Sbjct: 1 MKNLTPMMKQYMDIKKNYEDAIVLFRLGDFYEAFFEDAEIISKVLNIVLTKRQNAPMAGI 60
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
P ++KL GY+V + EQ E P Q KG +V+RE+ V+T GTL E
Sbjct: 61 PHHALDNYLKKLVDSGYKVAICEQMEDPSQ------AKG----IVRREVTRVITPGTLIE 110
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG--QVMDDLDCSVL 500
+LLS+ + +YLMA+ + F VDV+T + + + ++DL
Sbjct: 111 EDLLSS--ENNYLMAV----------AFRENFNTAFVDVSTGELFVKDFETINDL----- 153
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
++ + N+ E I ++ L N + + W E ++K +
Sbjct: 154 ---------IDFVSIVNISQIICEENIFEELKDNLPNKFIEKLDDWYFEGFEDKVKETFK 204
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
++ + ++N Q L LG L YL+ + +
Sbjct: 205 IVSIDHF-----ELSNGQ--------------------------LRVLGALLKYLEYTLM 233
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
L K + + +M+LD+ ++NL + G+ LY LN
Sbjct: 234 SNLALEEPK----------KLEESKWMILDSKTVDNLSLI----PGEKGKNLYDILNKTK 279
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
TA G RLL+ W+ +PL I ERQ+ V N L E R+ L+ + D+ER+L R
Sbjct: 280 TAMGSRLLKKWILQPLKVKKDIIERQEIVDAF--FNDRLLLNEIREYLNGIFDVERILTR 337
Query: 740 L 740
L
Sbjct: 338 L 338
>gi|91205203|ref|YP_537558.1| DNA mismatch repair protein MutS [Rickettsia bellii RML369-C]
gi|122425878|sp|Q1RJJ5.1|MUTS_RICBR RecName: Full=DNA mismatch repair protein MutS
gi|91068747|gb|ABE04469.1| DNA mismatch repair protein MutS [Rickettsia bellii RML369-C]
Length = 888
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 183/425 (43%), Gaps = 67/425 (15%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K E P CG P
Sbjct: 20 QQYLDIKFAHLDCLLLFRMGDFYEMFYEDAVLASGVLGIALTKRGKNGDEEVPMCGVPYH 79
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + Y+V + +Q ETPE+ K +G VV R + ++T GT+ E L
Sbjct: 80 ALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVNRNVTRIITPGTVIEENL 135
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
++ + +YL +L P ++ T +C D++TS I + V + L
Sbjct: 136 ITT-VEPNYLASLV----VPKNKDTA---ALCYADLSTSTIFVVNVPE----------LE 177
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
L + +KP +L E R+ +DL NI ++
Sbjct: 178 ILNELARLKPREILLSEHLRS----------SDLAS---------------NISKQLNFR 212
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ DS A ++ E L + ++ G+ + + A+G L YL TL
Sbjct: 213 ITYQVDSFFAVNKCEKIILDFYK--MKDIKGVGEISNSQICAIGSILEYL-------TLT 263
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ LP D YM +D NLE+ NS G + G+L + LNH VT G
Sbjct: 264 QKENIPNLPKPKIIDF--HSYMTIDFSTRRNLEIVTNS-CGGNKGSLLSTLNHTVTKQGG 320
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL +L+ PL ++ I +R + N + R+ L + D+ER L R+ +
Sbjct: 321 RLLYNFLSSPLTDTHKINQRLNITEFFHS-NLDITAKVRELLKKTSDIERCLTRI-TMNR 378
Query: 746 ANGRN 750
+GR+
Sbjct: 379 GSGRD 383
>gi|424788684|ref|ZP_18215434.1| DNA mismatch repair protein MutS [Streptococcus intermedius BA1]
gi|422112464|gb|EKU16251.1| DNA mismatch repair protein MutS [Streptococcus intermedius BA1]
Length = 852
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 154/654 (23%), Positives = 262/654 (40%), Gaps = 142/654 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSEKPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT
Sbjct: 66 GVPYHSVQQYIDVLIESGYKVAIAEQVEDP------KKAVG----VVKREVVQVITPGTA 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A + +G+ +DV T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLEDFYGLAYMDVVTGEF---QVTTLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE E +L + N L
Sbjct: 162 CGEIRNLRAREVVLGYEL--PEAEHQVLANQMNLL------------------------- 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L++ ++ + Q GD L+ L G L Y+ ++ L
Sbjct: 195 ------LSQVETAFEDVQLLGDELSRLE----------------YQVAGKLLEYVHQTQL 232
Query: 621 DET--LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
E L R +E+ K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 233 RELSHLKRVHHYEI-----------KDFLQMDYATMTSLDLTENARTGKKHGSLYWLMDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ PL + I +RQD V Q F F + +L + D
Sbjct: 282 TKTAMGTRLLRRWIQHPLLDKERILKRQDVV-------QVFLDHFFERSDLADSLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R+ + G+ + K +L A + + L G + LG ++EN
Sbjct: 335 IERLASRV-----SFGKTNPKDLLQLAATLSNVPQIKGILQGID-----HPVLGQLIENL 384
Query: 793 E-----SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ + + ++P P +++ + FD E + R++ G D
Sbjct: 385 DDIPELANLIQSAISPDA--PNVITEGNIIQTGFD--ETLDKYRVVLRDGTSWIADI--- 437
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ KE AS +LK I Y KD Y V S VP + +++ K
Sbjct: 438 EAKEKAASGINNLK----------IDYNK--KDGYYFHVTNSQLEYVPSHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
R+ T + ++ GE+ +A + + I R+ G++ + Q +A
Sbjct: 486 ERFGTEELARIEGEMLEAREKSANLEYEIFIRIREEAGKYIKRLQSLAQTLATV 539
>gi|402820022|ref|ZP_10869589.1| hypothetical protein IMCC14465_08230 [alpha proteobacterium
IMCC14465]
gi|402510765|gb|EJW21027.1| hypothetical protein IMCC14465_08230 [alpha proteobacterium
IMCC14465]
Length = 934
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 193/432 (44%), Gaps = 67/432 (15%)
Query: 320 PPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYM 373
PPD +N++ +Q+ + K+ H D ++F++MG FYELF DA A LD+ +++
Sbjct: 17 PPD--QNITPMMRQFLDIKANHQDFLLFYRMGDFYELFFDDAITAAAALDITLTHRGKHL 74
Query: 374 KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICA 433
P CG P + +L R+G++V + EQTE P + K++GSK V + +
Sbjct: 75 DENIPMCGVPFHAAENYLHRLIRQGHKVAICEQTEDPAE----AKKRGSKSVVRREVV-R 129
Query: 434 VVTKGTLTEGELLSANPDASYLMALTESNQSPASQS-TDRCFGICVVDVATSRI-ILGQV 491
+VT GTLTE LL A + +YL A ++ Q ++ + + VD++T + I
Sbjct: 130 LVTAGTLTEDGLLEAGAN-NYLAAFGQTRQGARQEARQEENLALAWVDISTGDVQIFAGT 188
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETT 551
+ + L+ L P E++ P + LS E + + +V +L S +E+
Sbjct: 189 FEAIQGR-----LAGLMPRELLLP-DSLSREKQGLLSESCGEVVVTELT--SSQASSESG 240
Query: 552 VLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
+ N Y T E GD + +A G
Sbjct: 241 YAALVNAYQVATLEGF------------------------------GDWSRSMYAACGSL 270
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ YL TL + K L ++ M +DA +NLE+ +N ++G+ G+
Sbjct: 271 INYL-------TLTQLGKLPNLKPPRLTSADER--MRIDAATCQNLEILQN-KTGEKKGS 320
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF--ALEFRKA-LS 728
L+A ++ VT G R+L LA PL I R DA++ G + E ++A L
Sbjct: 321 LFAAIDKTVTGPGARMLSQRLAAPLAQKEAIEARLDAISFYAGHDAETMRTCETKRAILK 380
Query: 729 RLPDMERLLARL 740
+ PDM R L R+
Sbjct: 381 QAPDMARALGRM 392
>gi|197118138|ref|YP_002138565.1| DNA mismatch repair protein MutS [Geobacter bemidjiensis Bem]
gi|238690862|sp|B5EA63.1|MUTS_GEOBB RecName: Full=DNA mismatch repair protein MutS
gi|197087498|gb|ACH38769.1| DNA mismatch repair ATPase MutS-1 [Geobacter bemidjiensis Bem]
Length = 837
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 154/611 (25%), Positives = 245/611 (40%), Gaps = 121/611 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPHCGFPE 384
+Q+ E K++H D ++FF+ G FYE+F DA ++ L + E P CG P
Sbjct: 9 RQFLEIKAEHPDAILFFRCGDFYEMFLDDAVKASRILGITLTSRNKNADGSEVPLCGVPY 68
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ + + KL G +V + EQ E P+Q KG +VKRE+ V+T G + E
Sbjct: 69 HSCAPYIAKLVEAGEKVAICEQAEDPKQ------AKG----IVKREVVKVITPGLVIEDA 118
Query: 445 LLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV--LCC 502
LS + +YL+AL + C+G+ +D++T + + +D L ++ L C
Sbjct: 119 SLSPKEN-NYLLALCCDGE---------CYGLSYLDLSTGEFRVTE-LDGLQAALAELTC 167
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFW--DAETTVLEIKNIYN 560
+ P EII P + E +R + H +V+ + E W D + + N +
Sbjct: 168 ----IGPREIILPVS-FREEPKRKEVAHV---IVDRSITYFEEWVYDPDYCKRLVANQFK 219
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
TAESL G LP L A G L YL +
Sbjct: 220 GATAESL---------------GCDRLP--------------IALLAAGAVLHYLVDT-- 248
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K +G + +++LD NLE+ G G+L ++ V
Sbjct: 249 -------QKGHAPHVTGITPYNENEHLLLDESTRRNLELTATLSEGKRKGSLLGLMDRTV 301
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G R L+ W+ PL + I RQDA+ E +A M+ LLA +
Sbjct: 302 TAMGGRKLKQWINYPLMDLKKIWLRQDAIQ-----------ELMEAPGTREAMKSLLAGV 350
Query: 741 FASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
+ NGR S A+ K L S+L + + ++ GA L
Sbjct: 351 YDLERLNGRIS-----LASASAKDLSALRSSLSRLPAIKEQVAACGAGLL---------- 395
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIE---ASL 856
K L A + L D ++ ++ GG+ D Y+ +++ I
Sbjct: 396 ----KELNAGIDPLDELCDLISRAIVDDPPFVLRDGGIIADGYNQELDELRAISREGKGF 451
Query: 857 TKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L+ Q K G T I+ + I + Y +EV ++ ++P DY R + RY TP
Sbjct: 452 IARLEAQEK--GRTGISSLKIRYNKVFGYYIEVTKANVSAIPDDYIRRQTLANAERYITP 509
Query: 914 NIK----KLLG 920
+K K+LG
Sbjct: 510 ELKEYEEKVLG 520
>gi|189424210|ref|YP_001951387.1| DNA mismatch repair protein MutS [Geobacter lovleyi SZ]
gi|254766629|sp|B3E6P2.1|MUTS_GEOLS RecName: Full=DNA mismatch repair protein MutS
gi|189420469|gb|ACD94867.1| DNA mismatch repair protein MutS [Geobacter lovleyi SZ]
Length = 872
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 185/429 (43%), Gaps = 78/429 (18%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K++H + ++FF+MG FYE+F DA V ++ LD+ E P CG P
Sbjct: 11 RQYLEIKAQHPESILFFRMGDFYEMFLDDALVASRILDITLTSRNKNSADEIPFCGVPFH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L GYRV V EQ E P+Q KG +VKR++ VVT +TE E
Sbjct: 71 SAQPYIARLVEAGYRVAVCEQIEDPKQ------TKG----LVKRDVVKVVTPALVTESE- 119
Query: 446 LSANPDA-SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLL 504
S PD S+L+AL S Q +G +D++T + D+L + LL
Sbjct: 120 -SLTPDENSFLLALCSSGQR---------WGCAWLDLSTGEFLTAN-SDNLAGA--ATLL 166
Query: 505 SELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
+ + P E++ P + L PE R + + W + ++
Sbjct: 167 ASIAPRELLLPDQLRRDLPPELALVAGDRPRAAVAD--------W-----------VLDK 207
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
L + VA+ + G +T L S+ L A G L YL+++
Sbjct: 208 DYCSKLICSQFGVASPEMLGLAVTEL--------------SEALLATGMVLHYLQEN--- 250
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
R A L + + ++ LD NLE+ SG+L L+ T
Sbjct: 251 ----RHATLPHL--RDLTIVRQNDHLALDPATRRNLELTATMTDNKKSGSLLGCLDRTAT 304
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G R L+ WL+ PL IR R +AV L+ N + R+ L + D+ERL R+
Sbjct: 305 AMGARTLKQWLSYPLVQVAPIRRRLEAVEELKE-NPALQDQLREQLKGVHDLERLNGRV- 362
Query: 742 ASSEANGRN 750
+ + A GR+
Sbjct: 363 SMAGAGGRD 371
>gi|283797910|ref|ZP_06347063.1| DNA mismatch repair protein MutS [Clostridium sp. M62/1]
gi|291074377|gb|EFE11741.1| DNA mismatch repair protein MutS [Clostridium sp. M62/1]
Length = 881
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 151/610 (24%), Positives = 257/610 (42%), Gaps = 114/610 (18%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE------QPHCGFPERN 386
+ E K ++ D ++F+++G FYE+F DA ++EL++ E P CG P
Sbjct: 4 HYLETKKQYPDCILFYRLGDFYEMFFEDAKTASRELEITLTGKECGLEERAPMCGVPYHA 63
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ KL +KGY+V + EQ E P + KG +VKRE+ VVT GT+T + L
Sbjct: 64 VESYLNKLVQKGYKVAIAEQMEDP------KTAKG----LVKREVIRVVTPGTITNSQAL 113
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ + +YLM + D FGI VD++T ++ +V
Sbjct: 114 EESKN-NYLMGIV---------YMDGMFGISSVDISTGDYLVTEV--------------- 148
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
++ER +L ++++ F+ + + E+KN + +
Sbjct: 149 ---------------KSERTLLDEIFKFAPSEIICNEAFYMSGVDLEELKNRLHVVVTAL 193
Query: 567 LNK--ADSNVANSQAEGDGLTCLPGI-LSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
N+ +D + E + L G+ LSE ++G+ A+ L+ +KS LD
Sbjct: 194 ENRFFSDDSCRRLLREHFHVNHLDGLGLSEY----EAGTIAAGAVLSYLYETQKSTLDH- 248
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+ YM+LD NLE+ E R GTL L+ TA
Sbjct: 249 -----------LTAITPYTTGQYMMLDTSTRRNLELTETLREKQKRGTLLWVLDKTKTAM 297
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G R+LR+++ +PL + I RQ+A+ L +N E + L+ + D+ERL+ R+ +
Sbjct: 298 GARMLRSFVEQPLIDREGILARQNAIEEL-NMNYISREEMAEYLNAIYDLERLIGRI-SY 355
Query: 744 SEANGRNSNKVVLYEDA------AKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
AN R+ ++ ++++ KK L EF G +L+ + S + + E T +
Sbjct: 356 KTANPRD---LIAFKNSLAMLPHIKKILGEF-----GADLLREVDSGMDTLEELTALIEH 407
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
+ P P V KD + EA+ + H + A + +E E +
Sbjct: 408 AIVDDP----PISVRDGGIIKDGYSE-EADR----LRHAKTEGKDWLAALEAEEREKTGI 458
Query: 858 KHLKEQ-RKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK 916
K+LK + K+ G Y EV S + VP + R + R+ T +K
Sbjct: 459 KNLKIKFNKVFG-------------YYFEVTNSFKDQVPDYFVRRQTLTNAERFTTDRLK 505
Query: 917 KLLGELSQAE 926
+L G + AE
Sbjct: 506 ELEGTILGAE 515
>gi|254433851|ref|ZP_05047359.1| DNA mismatch repair protein MutS [Nitrosococcus oceani AFC27]
gi|207090184|gb|EDZ67455.1| DNA mismatch repair protein MutS [Nitrosococcus oceani AFC27]
Length = 851
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 165/648 (25%), Positives = 267/648 (41%), Gaps = 116/648 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K+++ + ++ ++MG FYELF DA ++ LD+ GE P G P
Sbjct: 3 QQYLRIKAEYPNTLLLYRMGDFYELFYDDAQRASELLDIALTSRGRSAGEPIPMAGIPYH 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L R+G V + EQ P KG V+R++ ++T GT+TE L
Sbjct: 63 ALDSYLARLVRQGESVAICEQIGNPA------ASKGP----VERQVVRIITPGTVTEEAL 112
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A D N A Q FG V+D+ + R + +V + + S
Sbjct: 113 LEARRD----------NLLAALQKEGDVFGFAVLDLCSGRFNILEVASESAAT------S 156
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL I+PA +L E IL ++ V +P ++D E+ ++ +
Sbjct: 157 ELAR---IRPAELLVSEDLALILVDSKTEAVVRPLP-PWYFDRESAQRQLCRQF------ 206
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
G L G E + T ++A G L Y++ D
Sbjct: 207 -----------------GTQDLAGFGCEEMKTA------IAAAGCLLHYVQ----DTQRT 239
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSS-GTLYAQLNHCVTAFG 684
+F L ++ ++LD NLE+ E S SGDS TL A L+H TA G
Sbjct: 240 QFPHIHALQVE-----RQETSIILDPSTRRNLEL-EESLSGDSGRNTLIAVLDHTATAMG 293
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR +L RPL + L+++RQ A+A L + + + L + D+ER+L+R
Sbjct: 294 SRLLRRYLHRPLRDQTLLKQRQQALATL--LEGGLSDVLQTLLRGIGDIERILSR----- 346
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
V A + L +F AL + ++ L N +S L +
Sbjct: 347 ----------VALRSARPRDLVQFRQALGLLPKIQESLLQL-----NRDSLLLQSLQEDL 391
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL-KE 862
P + +L+ N +I GGV + +DS +++ + + + L K
Sbjct: 392 GPFPNLHELLQR-------AICENPPVLIRDGGVIALGFDSELDELRHLSGNAGQFLVKL 444
Query: 863 QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ T I + +G + Y LE+ + P DY R + KG RY TP +K
Sbjct: 445 EQRERERTKIPTLKVGYNKVHGYYLEITRAQAHQAPPDYIRRQTLKGAERYITPELK--- 501
Query: 920 GELSQAESEKESAL---KSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
G Q S +E AL K++ + L+ QF E R A A L ++
Sbjct: 502 GFEDQVLSARERALAREKALYEELLEQFMEPLPALRACANALAELDVL 549
>gi|383487714|ref|YP_005405393.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
Chernikova]
gi|383489402|ref|YP_005407079.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
Dachau]
gi|380760593|gb|AFE49115.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
Chernikova]
gi|380763125|gb|AFE51644.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
Dachau]
Length = 886
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 183/430 (42%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCG 381
++ +Q+ + K H+D ++ F+MG FYELF DA + + L + K E P CG
Sbjct: 16 TKMMQQYLDIKFAHLDCLLLFRMGDFYELFYEDAILASNILGIALTKRGKNCEEEIPMCG 75
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ +K G K VV R++ ++T GT+
Sbjct: 76 VPYHALEHYLTKLIEENYKVAICDQLETPEE---AKKRDGYK-AVVTRDVTRIITPGTII 131
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+S + +YL +L N+ AS IC VD++TS+I + V + + +
Sbjct: 132 EENLISV-TEPNYLTSLVIPKNKKTAS--------ICCVDLSTSKIFVINVPE----TEI 178
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+ EI+ N+ S +IL+ + + E +L+ I +
Sbjct: 179 LNELARLKSREILLSENLKSSNISDSILKQFNCRITYQVDSFFAINKCEKIILDFYKIRD 238
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
K ++NSQ + A+G L YL
Sbjct: 239 I-------KGIGEISNSQ--------------------------ICAIGSILEYL----- 260
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ N + G+ G++ LNH V
Sbjct: 261 --SLTQKQNIPHLPIPKIINFHN--YMTIDFSTRRNLEIVTNLQ-GNLYGSVLNTLNHTV 315
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L D+ER L R+
Sbjct: 316 TTQGGRLLYHFLSSPLTNIAKINHRLNITEFFYS-NLGIVTRIRELLKNTSDIERCLTRI 374
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 375 -TMNRSSGRD 383
>gi|303233668|ref|ZP_07320322.1| DNA mismatch repair protein MutS [Finegoldia magna BVS033A4]
gi|302495102|gb|EFL54854.1| DNA mismatch repair protein MutS [Finegoldia magna BVS033A4]
Length = 856
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 191/429 (44%), Gaps = 88/429 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQ---PHCGFPER 385
KQ+ E K ++ D ++FF++G FYE+F DA + +KEL++ + GE P CG P
Sbjct: 8 KQYKEIKEQNKDCILFFRLGDFYEMFFDDALIASKELEIVLTQRDCGENKKCPMCGIPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL KGY+V + EQ E P+ + KG +VKR I + T T+ E E
Sbjct: 68 VSDVYINKLVSKGYKVAICEQLEDPKLV------KG----LVKRGIIKIYTPATVIENE- 116
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S + +YLM++++ + A I +D++T + D ++ +S
Sbjct: 117 NSDTGNFNYLMSISKKSNEVA---------ISYIDISTGDVSYTNTTSDDIYKIIENEIS 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE----IKNIYNR 561
++ P EII + S + I S+F TTV I I ++
Sbjct: 168 KITPKEIIFNDHEFSTNSLETI--------------ASKFSIVLTTVNNGTDSIDFINSK 213
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
IT ++ N +N+ C+ +L + D + S+ +K +++
Sbjct: 214 ITYDNTNSETTNI-----------CVANLLKYVFRYQDDLVHINSS--------RKYYIN 254
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
E +M +D+ ++ NLE+ +N + +G+L+ LNH T
Sbjct: 255 E-----------------------FMEIDSNSVINLEIQKNLYTNSKNGSLFGVLNHTKT 291
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
+ G RLL ++L RPL + I RQ+ V + + + L + D++RLLA+L
Sbjct: 292 SMGSRLLHSYLERPLMDKEEILIRQNRVEEIFE-DYELLVNLENCLDGIYDLDRLLAKLS 350
Query: 742 ASSEANGRN 750
S AN ++
Sbjct: 351 YKS-ANAKD 358
>gi|386082133|ref|YP_005998710.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str. Rp22]
gi|292571897|gb|ADE29812.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str. Rp22]
Length = 891
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 183/430 (42%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCG 381
++ +Q+ + K H+D ++ F+MG FYELF DA + + L + K E P CG
Sbjct: 21 TKMMQQYLDIKFAHLDCLLLFRMGDFYELFYEDAILASNILGIALTKRGKNCEEEIPMCG 80
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ +K G K VV R++ ++T GT+
Sbjct: 81 VPYHALEHYLTKLIEENYKVAICDQLETPEE---AKKRDGYK-AVVTRDVTRIITPGTII 136
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+S + +YL +L N+ AS IC VD++TS+I + V + + +
Sbjct: 137 EENLISV-TEPNYLTSLVIPKNKKTAS--------ICCVDLSTSKIFVINVPE----TEI 183
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+ EI+ N+ S +IL+ + + E +L+ I +
Sbjct: 184 LNELARLKSREILLSENLKSSNISDSILKQFNCRITYQVDSFFAINKCEKIILDFYKIRD 243
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
K ++NSQ + A+G L YL
Sbjct: 244 I-------KGIGEISNSQ--------------------------ICAIGSILEYL----- 265
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ N + G+ G++ LNH V
Sbjct: 266 --SLTQKQNIPHLPIPKIINFHN--YMTIDFSTRRNLEIVTNLQ-GNLYGSVLNTLNHTV 320
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L D+ER L R+
Sbjct: 321 TTQGGRLLYHFLSSPLTNIAKINHRLNITEFFYS-NLGIVTRIRELLKNTSDIERCLTRI 379
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 380 -TMNRSSGRD 388
>gi|383487137|ref|YP_005404817.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
GvV257]
gi|383488561|ref|YP_005406239.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
Katsinyian]
gi|383499539|ref|YP_005412900.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500376|ref|YP_005413736.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
RpGvF24]
gi|380757502|gb|AFE52739.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
GvV257]
gi|380758073|gb|AFE53309.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
RpGvF24]
gi|380761440|gb|AFE49961.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
Katsinyian]
gi|380762285|gb|AFE50805.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str.
BuV67-CWPP]
Length = 886
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 183/430 (42%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCG 381
++ +Q+ + K H+D ++ F+MG FYELF DA + + L + K E P CG
Sbjct: 16 TKMMQQYLDIKFAHLDCLLLFRMGDFYELFYEDAILASNILGIALTKRGKNCEEEIPMCG 75
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ +K G K VV R++ ++T GT+
Sbjct: 76 VPYHALEHYLTKLIEENYKVAICDQLETPEE---AKKRDGYK-AVVTRDVTRIITPGTII 131
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+S + +YL +L N+ AS IC VD++TS+I + V + + +
Sbjct: 132 EENLISV-TEPNYLTSLVIPKNKKTAS--------ICCVDLSTSKIFVINVPE----TEI 178
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+ EI+ N+ S +IL+ + + E +L+ I +
Sbjct: 179 LNELARLKSREILLSENLKSSNISDSILKQFNCRITYQVDSFFAINKCEKIILDFYKIRD 238
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
K ++NSQ + A+G L YL
Sbjct: 239 I-------KGIGEISNSQ--------------------------ICAIGSILEYL----- 260
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ N + G+ G++ LNH V
Sbjct: 261 --SLTQKQNIPHLPIPKIINFHN--YMTIDFSTRRNLEIVTNLQ-GNLYGSVLNTLNHTV 315
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L D+ER L R+
Sbjct: 316 TTQGGRLLYHFLSSPLTNIAKINHRLNITEFFYS-NLGIVTRIRELLKNTSDIERCLTRI 374
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 375 -TMNRSSGRD 383
>gi|390169711|ref|ZP_10221644.1| DNA mismatch repair protein MutS [Sphingobium indicum B90A]
gi|389587715|gb|EIM65777.1| DNA mismatch repair protein MutS [Sphingobium indicum B90A]
Length = 869
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 193/438 (44%), Gaps = 102/438 (23%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQ-----PHCGFPERN 386
Q+ K++ D ++F++MG F+ELF DA A LD+ +GE P CG P +
Sbjct: 4 QYLALKAEAQDCLLFYRMGDFFELFFEDAKAAAATLDIALTSRGEHGGAPIPMCGVPVHS 63
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ +L + G+RV + EQTETP + K +GSK +V R I VT GTLTE LL
Sbjct: 64 AESYLARLIKAGHRVAIAEQTETPAE----AKARGSK-SLVARAIVRYVTAGTLTEETLL 118
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
+ D + L AL + A + +G+ D++T R + + L + L L+
Sbjct: 119 DSRRD-NMLAALAQVGGEEADE-----YGLAAADISTGRF---ETL-TLRAADLPAELAR 168
Query: 507 LRPVEIIKP--ANMLSPET---ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
LRP EI+ P ++ P++ +RA +R AET +K I+
Sbjct: 169 LRPSEIVLPDGLDLELPDSHPFDRAAFSSSR---------------AETA---LKRIFGV 210
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
T + + S+AE L+A+GG L YL +
Sbjct: 211 ATLDGFGQ------FSRAE------------------------LAAMGGLLGYLDHA--G 238
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+ L F + SG ++ +DA E+LE+ + SG +G+L ++ VT
Sbjct: 239 KGTLPFLAPPVRKTSG-------AHVAIDAATRESLEI-TTTMSGTRAGSLLGAVDRTVT 290
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF---AL---EFRKALSRLPDMER 735
G RLL L+ PL + Q A+ G+ Q F A+ + R AL LPD+ R
Sbjct: 291 GAGARLLAQDLSAPLMD-------QPAIEARLGLVQLFHDDAMLRDQLRVALRALPDIGR 343
Query: 736 LLARLFASSEANGRNSNK 753
L RL A GR S +
Sbjct: 344 ALGRL-----AMGRGSPR 356
>gi|291559008|emb|CBL37808.1| DNA mismatch repair protein MutS [butyrate-producing bacterium
SSC/2]
Length = 875
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 191/437 (43%), Gaps = 85/437 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ + K ++ D ++F+++G FYE+F DA +KEL++ ++ P C
Sbjct: 7 LTPMMQQYMQIKEENKDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPMC 66
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY+V + EQ E P Q KG +VKREI +VT GT
Sbjct: 67 GVPYHAVDSYLNKLVEKGYKVGICEQVEDPSQ------AKG----IVKREIVRIVTPGTN 116
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT------SRIILGQVMDD 494
+ L + +YLM + + D +GI VDV T S L +V D+
Sbjct: 117 ISQQSLDDEKN-NYLMCIF---------ANDGSYGISFVDVTTGDFRTTSMDSLAKVRDE 166
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ + P EII L + L+ + +++ + P +D E
Sbjct: 167 I---------FKFEPAEIICNDAFLISGMDFDYLKDKMSIVISSIEPYH--FDEEQ---- 211
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
AE K V N EG GL P +I+TG AL G L
Sbjct: 212 ---------AEERIKRQFKVGN--LEGLGLLDHP---MGVIATG--------ALLGYLHE 249
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+KS LD L+ +E +M++D+ + NLE+ E R G+L
Sbjct: 250 TQKSSLDH-LMHIEAYE-----------TSEFMIIDSSSRRNLELCETLRDKQKKGSLLW 297
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDM 733
L+ TA G R+LR + +PL + I ER DA+ L +Q E R+ L+ + D+
Sbjct: 298 VLDKTKTAMGARMLRNMVEQPLVDKKKIEERYDAITTL--TDQTIVREELREYLNPIYDL 355
Query: 734 ERLLARLFASSEANGRN 750
ERL+ ++ + AN R+
Sbjct: 356 ERLMTKV-SYKTANPRD 371
>gi|15604167|ref|NP_220682.1| DNA mismatch repair protein MutS [Rickettsia prowazekii str. Madrid
E]
gi|6647605|sp|Q9ZDM9.1|MUTS_RICPR RecName: Full=DNA mismatch repair protein MutS
gi|3860859|emb|CAA14759.1| DNA MISMATCH REPAIR PROTEIN MUTS (mutS) [Rickettsia prowazekii str.
Madrid E]
Length = 891
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 183/430 (42%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCG 381
++ +Q+ + K H+D ++ F+MG FYELF DA + + L + K E P CG
Sbjct: 21 TKMMQQYLDIKFAHLDCLLLFRMGDFYELFYEDAILASNILGIALTKRGKNCEEEIPMCG 80
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ +K G K VV R++ ++T GT+
Sbjct: 81 VPYHALEHYLTKLIEENYKVAICDQLETPEE---AKKRDGYK-AVVTRDVTRIITPGTII 136
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+S + +YL +L N+ AS IC VD++TS+I + V + + +
Sbjct: 137 EENLISV-TEPNYLTSLVIPKNKKTAS--------ICCVDLSTSKIFVINVPE----TEI 183
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+ EI+ N+ S +IL+ + + E +L+ I +
Sbjct: 184 LNELARLKSREILLSENLKSSNISDSILKQFNCRITYQVDSFFAINKCEKIILDFYKIRD 243
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
K ++NSQ + A+G L YL
Sbjct: 244 I-------KGIGEISNSQ--------------------------ICAIGSILEYL----- 265
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ N + G+ G++ LNH V
Sbjct: 266 --SLTQKQNIPHLPIPKIINFHN--YMTIDFSTRRNLEIVTNLQ-GNLYGSVLNTLNHTV 320
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L D+ER L R+
Sbjct: 321 TTQGGRLLYHFLSSPLTNIAKINHRLNITEFFYS-NLGIVTRIRELLKNTSDIERCLTRI 379
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 380 -TMNRSSGRD 388
>gi|443469639|ref|ZP_21059793.1| DNA mismatch repair protein MutS [Pseudomonas pseudoalcaligenes
KF707]
gi|442899091|gb|ELS25622.1| DNA mismatch repair protein MutS [Pseudomonas pseudoalcaligenes
KF707]
Length = 857
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 149/603 (24%), Positives = 240/603 (39%), Gaps = 126/603 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K++H D+++F++MG FYE+F DA AK LD+ Q P G P
Sbjct: 14 QQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGKSIPMAGIPFH 73
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 74 SVEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTVSDEAL 123
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + R + ++ L L
Sbjct: 124 LDERRD----------NLLAAVLGDERLFGLAVLDITSGRFTVQEIK---GWENLLAELE 170
Query: 506 ELRPVEIIKPANM---LSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L P E++ P + L E R + R R P WD ++R
Sbjct: 171 RLNPAELLIPDDWPQGLPAEKRRGVRR--RAP-----------WD-----------FDRD 206
Query: 563 TAESLNKADSNVANSQAEG-DGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
+A V + + G DGLT G L++ + +AL L L+ +D
Sbjct: 207 SARKSLCQQFGVQDLKGFGCDGLTLAIGSAGCLLAYAKETQR--TAL-PHLRSLRHERID 263
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+T ++LDA NLE+ N SG TL + ++ C T
Sbjct: 264 DT-----------------------VILDAATRRNLELDVNL-SGGRDNTLQSVVDRCQT 299
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
A G RLL WL RPL + ++ RQ+A+ L +++ + L + D+ER+LAR+
Sbjct: 300 AMGSRLLSRWLNRPLRDRAVLEARQNAIDCL--LDRYRFENLQPQLKEIGDVERVLARI- 356
Query: 742 ASSEANGRNSNKVVLYED-AAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHI 800
N R + L + AA QLQ ++ L L A S
Sbjct: 357 --GLRNARPRDLARLRDALAALPQLQAAMTELDVPHLQTLAGS----------------- 397
Query: 801 LTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKH 859
+ D +N +I GGV YD +++ + + ++
Sbjct: 398 ----------IRTYPELADLLSRAIIDNPPAVIRDGGVIKTGYDPELDELQALSENAGQY 447
Query: 860 L------KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
L ++ R L + + Y I Y +E+P P DY R + KG R+ TP
Sbjct: 448 LMDLEAREKARTGLPNLKVGYNRIHG--YYIELPRVQAEQAPADYIRRQTLKGAERFITP 505
Query: 914 NIK 916
+K
Sbjct: 506 ELK 508
>gi|90421887|ref|YP_530257.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris
BisB18]
gi|90103901|gb|ABD85938.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris
BisB18]
Length = 882
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 184/417 (44%), Gaps = 71/417 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ E K+ + ++F++MG FYELF DA + A+ L + K + P CG P
Sbjct: 3 EQYHEIKAANPGLLLFYRMGDFYELFFEDAEIAARALGITLTKRGKHKGQDIPMCGVPVE 62
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L G+RV V EQTE P R+ VV+R++ ++T GTLTE L
Sbjct: 63 RSDDYLHRLIALGHRVAVCEQTEDPAAARARK-------SVVRRDVVRLITPGTLTEDTL 115
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L A + +YL+A+ + AS DR G+ +D++T+ I+ + + L L+
Sbjct: 116 LDARAN-NYLLAIARAR---ASAGADR-IGLAWIDISTAEFIVTECAP----AELAATLA 166
Query: 506 ELRPVEIIKPANMLS-PETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P E I + S PE PL+ +L ++ +++++ TA
Sbjct: 167 RINPNEAIVTDALYSDPEL---------GPLLRELPAVTPL---------TRDVFDSATA 208
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
E VA DGL+ +S L +T A + Y+ ++ L +
Sbjct: 209 ERRLCDYFAVATM----DGLSA----MSRLEAT---------AAAACVTYIDRTQLGKK- 250
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
P S A M +D NLE + SG+ G+L ++ VTA G
Sbjct: 251 --------PPLSPPSREATGSTMAIDPATRANLE-LTRTLSGERRGSLLDAIDCTVTAAG 301
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARL 740
RLL LA PL + I +R DAVA L + P E R L PDM R LARL
Sbjct: 302 SRLLAQRLAAPLTDVEQIAQRLDAVAAL--LPDPGLREALRATLRAAPDMSRALARL 356
>gi|346321824|gb|EGX91423.1| DNA mismatch repair protein Msh3 [Cordyceps militaris CM01]
Length = 1099
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 159/667 (23%), Positives = 269/667 (40%), Gaps = 72/667 (10%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ + Q+ + K KH+D ++ ++G + F DA V AKEL + + G E P
Sbjct: 191 LTPMEIQFLDIKRKHLDTILIVEVGYKFRFFGEDARVAAKELSIVCIPGKMRYDEHPSEA 250
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++ +L G++V VV Q ET +K +++ R++
Sbjct: 251 HLDRFASASIPVHRLPVHARRLVAAGHKVGVVRQVETAAL----KKVGDNRNAPFTRKLT 306
Query: 433 AVVTKGTLTE--GELLSA------NPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
+ TKGT + G+L + + YL+ LTES A GI V AT
Sbjct: 307 NLYTKGTYIDENGDLEQSTQGGNTSSSGGYLLCLTESKAKGAGTDEKVDVGILAVQPATG 366
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
II D S + L + P E + + L+ T++ I L + + D +
Sbjct: 367 DIIYDTFEDGFMRSEIETRLLHISPCEFVIVGD-LTKATDKLIQHLAGSSTNVFGDRSRV 425
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
T E + + AE + +A S+ N Q+ +L +++ ++ +
Sbjct: 426 ERVPRTPTMAAEAASHVTQFYAEKMKEATSS-QNEQSAS--------LLEKVLRLPEAVT 476
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LSA+ + +L + L E + K+ F + + +M+++ LE+LEV+ N
Sbjct: 477 ICLSAM---MTHLTEYGL-EHIFDLTKY-------FESFSTRAHMLVNGTTLESLEVYRN 525
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL---RGVNQPF 719
+ G+L+ ++ +T FG+RLLR WL RPL + + R AV L R
Sbjct: 526 ATDHAERGSLFWAIDKTLTRFGRRLLRKWLGRPLLHQADLEARLVAVKELHDKRSTAAVG 585
Query: 720 ALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
LE A +R D+ER L R++ K E A Q + +++ H +
Sbjct: 586 GLERLLAKTRT-DLERCLVRIY---------YGKCTRPELLAALQALQQVAS-HYASVKT 634
Query: 780 QACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
A + A L L IL GL +VS L+ D ++
Sbjct: 635 PADAGFDAPLLTDAVLALPQIL----GL--VVSHLERIN--LDAARKDDKYGFFRDEHQT 686
Query: 840 MDYDSACKKVKEIEASLTKH-LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDY 898
D + + +E L +H +L + YVT+ +L+EVP S VP +
Sbjct: 687 EDMEDHQMGIAHVEHQLDQHRAAAAEQLKHKKPVDYVTVAGIEFLIEVPNSDIKHVPASW 746
Query: 899 ELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAAT 958
S K R+ TP + +L+ E Q +A + + L+ + R V+A
Sbjct: 747 AKISGTKKVSRFHTPAVVQLVAERDQHREALAAACDAAFRALLASVAAAYQPLRDAVSAL 806
Query: 959 AGLTLIL 965
A L +L
Sbjct: 807 ATLDCLL 813
>gi|99036007|ref|ZP_01315047.1| hypothetical protein Wendoof_01000101, partial [Wolbachia
endosymbiont of Drosophila willistoni TSC#14030-0811.24]
Length = 672
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 185/418 (44%), Gaps = 73/418 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ K+++ D ++F+++G FYELF DA AK L++ K E P CG P
Sbjct: 31 EQYLNLKAQYKDHLLFYRLGDFYELFFDDAIKAAKLLNIVLTKRGNSCGQEIPMCGVPAH 90
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL G++V + +Q ET ++ K++G K +VKR++ VVT GT+ E L
Sbjct: 91 SSESYLHKLIDLGFKVAICDQLETADE----AKKRGYKS-IVKRDVVRVVTPGTIIEDSL 145
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCLL 504
L + +YL ++ E N + I ++++T + + LD +L
Sbjct: 146 LEDKSN-NYLASIVEQNDE---------YAISWLELSTGKFFHTLTSLKALDSDLL---- 191
Query: 505 SELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P E++ E R+IL++ + + E+ + T+ E I
Sbjct: 192 -RISPRELLISEKFTEDEKIRSILKNYKISITQHAQSFFEYSKSHRTLCEFYKI------ 244
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
EL S G+ + A G L Y
Sbjct: 245 ---------------------------RELGSIGNFSKVEIMACGALLEY---------- 267
Query: 625 LRFAKFELLPCSGFGDMAKKP-YMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
+R + +P F K+ +M++DA A NLE+F +++ G+ G+L + ++H VTA
Sbjct: 268 VRVTQRGSIPRLEFPKTYKQQNFMLIDASARRNLELF-STQFGEKKGSLISVIDHTVTAS 326
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
G RLL+ LA PL S I R + A N + R+ LS +PD+ER L+RL
Sbjct: 327 GGRLLKQMLASPLACSKAINLRL-STAQFFVNNHDSRRKIREILSNIPDIERSLSRLI 383
>gi|260431975|ref|ZP_05785946.1| DNA mismatch repair protein MutS [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415803|gb|EEX09062.1| DNA mismatch repair protein MutS [Silicibacter lacuscaerulensis
ITI-1157]
Length = 876
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 183/425 (43%), Gaps = 75/425 (17%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ- 377
+ N++ Q+ E K H D ++F++MG FYE+F DA A+ LD+ K GE
Sbjct: 1 MSNVTPMMAQYLEIKEAHKDALLFYRMGDFYEMFFEDAVNAAEALDIALTKRGKHNGEDI 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + L RKG+RV V EQ E+P + K++GSK VVKR++ +VT
Sbjct: 61 PMCGVPVHSAEGYLLTLIRKGFRVAVCEQMESPAE----AKKRGSK-SVVKRDVVRLVTP 115
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTLTE LL A ++L A E A + D++T VM L
Sbjct: 116 GTLTEDALLEARRH-NFLAAYAEVRDEAA---------LAWADISTGAF---HVM-PLTS 161
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
L L+ L P E+I + A LR T L L P+
Sbjct: 162 VRLSPELARLAPSELI------VADGAEADLRDTVGDLGIALTPIGR------------- 202
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
DS A + C + L + G+ G +SA+G + YL+
Sbjct: 203 ----------ASFDSTAAEKR------ICGLFHVGTLDAFGNFGRAEISAMGALIDYLE- 245
Query: 618 SFLDETLLRFAKFELL--PCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ + K LL P D + +DA NLE S SG +G+L +
Sbjct: 246 ------ITQKGKLPLLQTPMKESEDRVVQ----IDAATRRNLE-LTRSLSGGRAGSLLSV 294
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
++ VT G RLL L+ P N +I R DAV + A + R+AL + PD++R
Sbjct: 295 VDRTVTPGGARLLEQRLSSPSRNLDVIHARLDAV-DFAAQDSLIAADLREALRKTPDLDR 353
Query: 736 LLARL 740
L+RL
Sbjct: 354 ALSRL 358
>gi|94676984|ref|YP_588664.1| DNA mismatch repair protein MutS [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|172046203|sp|Q1LTQ0.1|MUTS_BAUCH RecName: Full=DNA mismatch repair protein MutS
gi|94220134|gb|ABF14293.1| DNA mismatch repair protein MutS [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 855
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 181/427 (42%), Gaps = 92/427 (21%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PH 379
N + +Q+W+ K++H D ++F++MG FYELF DA + ++ +D+ K GE P
Sbjct: 11 NHTPMMQQYWQIKAQHSDVLLFYRMGDFYELFYEDAKLASQLIDISLTKRGFSAGEPIPM 70
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + KL G V + EQ P KG V+R + +VT GT
Sbjct: 71 AGIPYHALDSYLAKLVALGKSVAICEQVGEPT------INKGP----VERRVVRIVTPGT 120
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
L++ LL+ D + L A+ + Q FG +D+ + R I+ + D
Sbjct: 121 LSDEVLLNERQD-NLLAAMLQDKQG---------FGYATLDITSGRFIVSEPKD------ 164
Query: 500 LCCLLSELRPVEIIKPANMLSPETER--AILRHTRNPLVNDLVPLSEF-WDAETTVLEIK 556
+ +EL+ PA +L P+T+ A++ H R P+ EF D L I+
Sbjct: 165 FEAMAAELQRT---NPAELLYPDTQHNLALIEHRRGLRRR---PIWEFELDTACQQLMIQ 218
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
S +G G+ C L A G L Y K
Sbjct: 219 -----------------FGTSSLKGFGIEC--------------AHLALRAAGCLLQYAK 247
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ + + S ++ Y+V+DA + NLE+ N SG TL A L
Sbjct: 248 DT---------QRTAMPHISTITLERQEDYVVMDAATMRNLELTHN-LSGGIEHTLVAVL 297
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRG---VNQPFALEFRKALSRLPDM 733
+H VT+ G R+L+ WL P + I RQ ++ L+G + QP L ++ D+
Sbjct: 298 DHTVTSMGSRMLKRWLQMPTKHLTTIENRQQSIYFLQGKFDILQPI-------LRKIGDL 350
Query: 734 ERLLARL 740
ER+LARL
Sbjct: 351 ERILARL 357
>gi|319946044|ref|ZP_08020293.1| DNA mismatch repair protein HexA [Streptococcus australis ATCC
700641]
gi|417919163|ref|ZP_12562703.1| DNA mismatch repair protein MutS [Streptococcus australis ATCC
700641]
gi|319747852|gb|EFW00097.1| DNA mismatch repair protein HexA [Streptococcus australis ATCC
700641]
gi|342834540|gb|EGU68807.1| DNA mismatch repair protein MutS [Streptococcus australis ATCC
700641]
Length = 847
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 158/649 (24%), Positives = 263/649 (40%), Gaps = 132/649 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
+S G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 ISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L KGY+V + EQ E P+Q VVKRE+ V+T GT+
Sbjct: 66 GVPYHSAQQYIDVLIEKGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTV 115
Query: 441 TEGELLSANPDAS--YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCS 498
+ S PD++ +L+AL+ +TD +G+ +D+ T QV D +
Sbjct: 116 VD----STKPDSANNFLVALSHD-------ATD--YGLAYMDLVTGEF---QVTSLNDFA 159
Query: 499 VLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
++C + LR EI+ ++ E E +L N L L P+SE +
Sbjct: 160 MVCGEIRNLRAREIVLTYSL--SEGEERVLLGQMNLL---LSPISEVAE----------- 203
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
+ Q G LT L I A GG L Y++++
Sbjct: 204 -----------------DVQLLGAELTHLERI----------------AAGGLLRYVQET 230
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K EL + ++ +D +L++ EN+R+G G+LY L+
Sbjct: 231 ---------QKRELHHIKPAHHYEVRDFLQMDYATKASLDLTENARTGKKHGSLYWLLDE 281
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPD 732
TA G RLLR W+ +PL + I ERQ+ + Q F F + L + D
Sbjct: 282 SKTAMGGRLLRAWIQKPLMDRHRIEERQEII-------QVFLDHFFERSDLADRLKGVYD 334
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ERL +R+ + G+ + K +L QL E L L+ +G + +
Sbjct: 335 IERLASRV-----SFGKTTPKDLL-------QLGE---TLRHVPLIKSLLVEMGEPVLDL 379
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEI 852
QL LP + +++ D D G II G D D ++E
Sbjct: 380 LIAQLDE-------LPELCRLIEAAIDP-DAPIVLTEGNII-RTGFDPTLDQYRVVLREG 430
Query: 853 EASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWT 912
+ + ++R+ G T + KD Y V S VP + +++ K R+ T
Sbjct: 431 TGWIAEIEAKEREASGITGLKIDYNKKDGYYFHVTNSQLSRVPAHFFRKATLKNSERFGT 490
Query: 913 PNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
+ ++ GE+ +A + S +I R+ +G++ + Q +A
Sbjct: 491 EELARIEGEMLEAREQSTSLEYAIFLRIREEVGKYIQRLQSLAQALATV 539
>gi|429761467|ref|ZP_19293892.1| DNA mismatch repair protein MutS [Anaerostipes hadrus DSM 3319]
gi|429183720|gb|EKY24761.1| DNA mismatch repair protein MutS [Anaerostipes hadrus DSM 3319]
Length = 875
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 191/437 (43%), Gaps = 85/437 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ + K ++ D ++F+++G FYE+F DA +KEL++ ++ P C
Sbjct: 7 LTPMMQQYMQIKEENKDCILFYRLGDFYEMFFDDALTASKELEITLTGKNCGLEERAPMC 66
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY+V + EQ E P Q KG +VKREI +VT GT
Sbjct: 67 GVPYHAVDSYLNKLVEKGYKVGICEQVEDPSQ------AKG----IVKREIVRIVTPGTN 116
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT------SRIILGQVMDD 494
+ L + +YLM + + D +GI VDV T S L +V D+
Sbjct: 117 ISQQSLDDEKN-NYLMCIF---------ANDGSYGISFVDVTTGDFRTTSMDSLAKVRDE 166
Query: 495 LDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE 554
+ + P EI+ L + L+ + +++ + P +D E
Sbjct: 167 I---------FKFEPAEIVCNDAFLISGMDFDYLKDKMSIVISSIEPYH--FDEEQ---- 211
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
AE K V N EG GL P +I+TG AL G L
Sbjct: 212 ---------AEERIKRQFKVGN--LEGLGLVDHP---MGVIATG--------ALLGYLHE 249
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYA 674
+KS LD L+ +E +M++D+ + NLE+ E R G+L
Sbjct: 250 TQKSSLDH-LMHIEAYE-----------TSEFMIIDSSSRRNLELCETLRDKQKKGSLLW 297
Query: 675 QLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDM 733
L+ TA G R+LR + +PL + I ER DA+ L +Q E R+ L+ + D+
Sbjct: 298 VLDKTKTAMGARMLRNMVEQPLVDKKKIEERYDAITTL--TDQTIVREELREYLNPIYDL 355
Query: 734 ERLLARLFASSEANGRN 750
ERL+ ++ + AN R+
Sbjct: 356 ERLMTKV-SYKTANPRD 371
>gi|414156453|ref|ZP_11412755.1| DNA mismatch repair protein mutS [Streptococcus sp. F0442]
gi|410870100|gb|EKS18059.1| DNA mismatch repair protein mutS [Streptococcus sp. F0442]
Length = 849
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 154/657 (23%), Positives = 273/657 (41%), Gaps = 133/657 (20%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------ 377
+ +S G +Q+ + K + D + F+MG FYELF DA A+ L++ +
Sbjct: 3 VEKISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNAENPI 62
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P G P + ++ L +GY+V + EQ E P ++ KG VVKRE+ V+T
Sbjct: 63 PMAGVPYHSAQQYIDVLIEQGYKVAIAEQMEDP------KEAKG----VVKREVVQVITP 112
Query: 438 GTLTEGELLSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
GT+ + S PD+ ++L+AL S +G+ +D+ T QV
Sbjct: 113 GTVVD----STKPDSENNFLVALDRSGND---------YGLAYMDLVTGEF---QVTTLN 156
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
D +++C + LR E++ + PE E + N L
Sbjct: 157 DFTMVCGEIRNLRAREVVLGYEL--PEQEERVFVSQMNLL-------------------- 194
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
L+ ++ + + Q GD L+ L E + G V L +L
Sbjct: 195 -----------LSHVETALDDVQLLGDHLSEL-----EKKTAGKLLQYVHQTQMRELSHL 238
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
KK+ +E+ C ++ +D +L++ EN+R+G G+LY
Sbjct: 239 KKAH---------HYEI--CD---------FLQMDFATKASLDLTENARTGKKHGSLYWY 278
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSR 729
L+ TA G RLLR+W+ +PL + I+ERQD + Q F F + +L
Sbjct: 279 LDETKTAMGGRLLRSWIQKPLVDLKRIQERQDII-------QVFMDHFFERSDLTDSLKG 331
Query: 730 LPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAIL 789
+ D+ERL +R+ + G+ + K +L + S L G + D L A L
Sbjct: 332 VYDIERLASRV-----SFGKINPKDLLQLGDTLGHVPTIKSILLG--IGDPVLDVLIARL 384
Query: 790 ENTESRQLHHILTPGKG--LPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACK 847
+ E +LH ++T A+++ + FD E + R++ G
Sbjct: 385 D--ELPELHRLITSAIAPEASAVITEGNIIRTGFD--EQLDQYRVVLRDGTGW------- 433
Query: 848 KVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+ EIEA ++R+ G T + KD Y V S VP + +++ K
Sbjct: 434 -IAEIEA-------KEREASGITGLKIDYNKKDGYYFHVTNSQLNHVPAHFFRKATLKNS 485
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
R+ T + ++ G++ +A + + +I R+ + ++ + +Q+ A A + ++
Sbjct: 486 ERFGTEELARIEGDMLEAREKSANLEYTIFMRIREEVGKYIQRLQQLAQAIATVDVL 542
>gi|417925957|ref|ZP_12569370.1| DNA mismatch repair protein MutS [Finegoldia magna
SY403409CC001050417]
gi|341590559|gb|EGS33797.1| DNA mismatch repair protein MutS [Finegoldia magna
SY403409CC001050417]
Length = 733
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 191/429 (44%), Gaps = 88/429 (20%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK---GEQ---PHCGFPER 385
KQ+ E K ++ D ++FF++G FYE+F DA + +KEL++ + GE P CG P
Sbjct: 8 KQYKEIKEQNKDCILFFRLGDFYEMFFDDALIASKELEIVLTQRDCGENKKCPMCGIPYH 67
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL KGY+V + EQ E P+ + KG +VKR I + T T+ E E
Sbjct: 68 VSEVYINKLVSKGYKVAICEQLEDPKLV------KG----LVKRGIIKIYTPATVIENE- 116
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
S + +YLM++++ + A I +D++T + D ++ +S
Sbjct: 117 NSDTGNFNYLMSISKKSNEVA---------ISYIDISTGDVSYTNTTSDDIYKIIENEIS 167
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLE----IKNIYNR 561
++ P EII + S + I S+F TTV I I ++
Sbjct: 168 KITPKEIIFNDHEFSTNSLETI--------------ASKFSIVLTTVNNGTDSIDFINSK 213
Query: 562 ITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLD 621
IT ++ N +N+ C+ +L + D + S+ +K +++
Sbjct: 214 ITYDNTNSETTNI-----------CVANLLKYVFRYQDDLVHINSS--------RKYYIN 254
Query: 622 ETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
E +M +D+ ++ NLE+ +N + +G+L+ LNH T
Sbjct: 255 E-----------------------FMEIDSNSVINLEIQKNLYTNSKNGSLFGVLNHTKT 291
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF 741
+ G RLL ++L RPL + I RQ+ V + + + L + D++RLLA+L
Sbjct: 292 SMGSRLLHSYLERPLMDKEEILIRQNRVEEIFE-DYELLVNLENCLDGIYDLDRLLAKLS 350
Query: 742 ASSEANGRN 750
S AN ++
Sbjct: 351 YKS-ANAKD 358
>gi|392429508|ref|YP_006470522.1| DNA mismatch repair protein HexA [Streptococcus intermedius JTH08]
gi|419776877|ref|ZP_14302796.1| DNA mismatch repair protein MutS [Streptococcus intermedius SK54]
gi|383845562|gb|EID82965.1| DNA mismatch repair protein MutS [Streptococcus intermedius SK54]
gi|391758657|dbj|BAM24274.1| DNA mismatch repair protein HexA [Streptococcus intermedius JTH08]
Length = 852
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 146/631 (23%), Positives = 253/631 (40%), Gaps = 135/631 (21%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHC 380
LS G +Q+ + K + D + F+MG FYELF DA A+ L++ + P
Sbjct: 6 LSPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAINAAQILEIALTSRNKNSEKPIPMA 65
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + ++ L GY+V + EQ E P +K G VVKRE+ V+T GT
Sbjct: 66 GVPYHSVQQYIDVLIESGYKVAIAEQVEDP------KKAVG----VVKREVVQVITPGTA 115
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+ S+ PD +++N A + +G+ +DV T QV D +++
Sbjct: 116 VD----SSKPD-------SQNNFLVALDKLEDFYGLAYMDVVTGEF---QVTTLSDFNMV 161
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
C + LR E++ + PE E +L + N L
Sbjct: 162 CGEIRNLRAREVVLGYEL--PEAEHQVLANQMNLL------------------------- 194
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
L++ ++ + Q GD L+ L + G L ++
Sbjct: 195 ------LSQVETAFEDVQLLGDDLSRLE-----------------YQVAGKLL----EYV 227
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+T LR EL K ++ +D + +L++ EN+R+G G+LY ++
Sbjct: 228 HQTQLR----ELSHLKQVHHYEIKDFLQMDYATMTSLDLTENARTGKKHGSLYWLMDETK 283
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDME 734
TA G RLLR W+ PL + I +RQD V Q F F + +L + D+E
Sbjct: 284 TAMGTRLLRRWIQHPLLDKERILKRQDVV-------QVFLDHFFERSDLADSLKGVYDIE 336
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTE- 793
RL +R+ + G+ + K +L A + + L G + LG ++EN +
Sbjct: 337 RLASRV-----SFGKTNPKDLLQLAATLSNVPQIKGILQGID-----HPVLGQLIENLDD 386
Query: 794 ----SRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
+ + ++P P +++ + FD E + R++ G +
Sbjct: 387 IPELANLIQSAISPDA--PNVITEGNIIQTGFD--ETLDKYRVVLRDG--------TSWI 434
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFR 909
+IEA ++R G ++ KD Y V S VP + +++ K R
Sbjct: 435 ADIEA-------KERVASGINNLKIDYNKKDGYYFHVTNSQLEHVPSHFFRKATLKNSER 487
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRL 940
+ T + ++ GE+ +A + + I R+
Sbjct: 488 FGTEELARIEGEMLEAREKSANLEYEIFIRI 518
>gi|356575955|ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
Length = 1070
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/478 (26%), Positives = 207/478 (43%), Gaps = 70/478 (14%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFPERNFSM 389
++Q + K+KH D ++ ++G Y F DA ++ L + +M P ++
Sbjct: 99 EQQVLDLKAKHPDVLLMVEVGYKYRFFGQDAEHASRVLGIYAHMDHNFLTASIPTFRLNV 158
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGS-KDKVVKREICAVVTKGTLTEGELLSA 448
+V +L GY+V VV+QTET K GS + +R + A+ TK TL L
Sbjct: 159 HVRRLVTAGYKVGVVKQTETAA-----IKAHGSNRSAPFERGLSALYTKATLEAAPDLGG 213
Query: 449 NPD-----ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
D ++YL+ + E + D GI V+++T ++ G+ D S L +
Sbjct: 214 AEDGCGGESNYLLCVVEKSVLDEKGGVDARIGIVAVEISTGDVVFGEFCDGFLRSALEAV 273
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE---FWDAETTVLEIKNIYN 560
+ L P E++ + LS +TE+ +L P N V F D + E+ +Y
Sbjct: 274 VLNLSPAELLL-GDPLSKQTEKLLLDFA-GPASNVRVERFSRDCFIDG-GALAEVMTLYE 330
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ +S +DS +N E I+ E+++ D Q AL T+ +LK+
Sbjct: 331 NMHIDS--PSDSIQSNDLTENRSQKL---IIKEVMNMPDLAVQ---ALALTIRHLKE--- 379
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPY-----MVLDAPALENLEVFENSRSGDSSGTLYAQ 675
FE + CSG + +P+ M L A AL+ LEV +N+ G G+L
Sbjct: 380 -------FGFERILCSG---ASIRPFSSNTEMTLSANALQQLEVLKNNSDGSEIGSLLQI 429
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR---------------------G 714
+N +T FG RLLR W++ PL + LI R AV+ +
Sbjct: 430 MNRTLTIFGSRLLRHWVSHPLCDQTLISARLHAVSEIAQSMGSCNSVKNLVRVEEDPDVA 489
Query: 715 VNQP---FALEF-RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEF 768
+ QP + L L R PD++R + R+F + A V+ +A KQLQ+
Sbjct: 490 IVQPELAYTLSLVLTTLGRAPDIQRGITRIFHCT-ATPSEFVAVIQAILSAGKQLQQL 546
>gi|237809472|ref|YP_002893912.1| DNA mismatch repair protein MutS [Tolumonas auensis DSM 9187]
gi|237501733|gb|ACQ94326.1| DNA mismatch repair protein MutS [Tolumonas auensis DSM 9187]
Length = 865
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 156/657 (23%), Positives = 263/657 (40%), Gaps = 118/657 (17%)
Query: 321 PDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ--- 377
P L + +Q+ K++H D ++F++MG FYELF DA A+ LD+ K Q
Sbjct: 8 PQSLTTHTPMMQQYLGLKAQHPDILLFYRMGDFYELFYDDARKAAELLDISLTKRGQSAG 67
Query: 378 ---PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAV 434
P G P + +L + G V + EQ P KG V+R++ +
Sbjct: 68 QPIPMAGVPYHAVEGYLSRLVQLGESVAICEQIGDPA------TSKGP----VERKVVRI 117
Query: 435 VTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDD 494
+T GTLT+ LL+ D N A +G+ +DVA+ R ++ Q
Sbjct: 118 ITPGTLTDEALLNERQD----------NLIVAVDFVAPHYGLAAMDVASGRFVINQFTRQ 167
Query: 495 LDCSVLCCLLSELRPVEIIKPANM--LSPETERAILRHTRNPLVNDLVPLSEFWDAETTV 552
L L L P E++ N L+ +R +R R P W+
Sbjct: 168 ---ETLAAELQRLNPAELLYSENFPDLTQLGQRRGMR--RRPA----------WE----- 207
Query: 553 LEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTL 612
E Y+ + +Q E L G+ E I+ L A G L
Sbjct: 208 FEFSTSYHLLC-------------NQFETQDLRGF-GVEEEKIA--------LQAAGALL 245
Query: 613 FYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTL 672
Y++ + + L G + +V+DA NLE+ N SG TL
Sbjct: 246 QYVRDT---------QRTALPHIQGIRLEKSEQMVVMDAATRRNLELTGNL-SGGFDNTL 295
Query: 673 YAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPD 732
A L+ T G RLL+ WL +P+ + +++RQD + L ++Q L ++ D
Sbjct: 296 AAVLDATATPMGSRLLKRWLHQPIRSKNQLQQRQDVITEL--LDQQMMSALMPVLKQIGD 353
Query: 733 MERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENT 792
+ER++ARL A A R+ +++ A +QL E L IL+N
Sbjct: 354 VERIIARL-ALRSARPRDLSRL----RVAFQQLPE-----------------LQIILQNN 391
Query: 793 ESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKE 851
+ Q L +S ++ + N ++ GGV Y ++++
Sbjct: 392 PTLQ---------QLAQAISTFPELQELLERAVVENPPVVLRDGGVIASGYHPELDELRD 442
Query: 852 IEASLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGF 907
+E T++L++ +R+ G T++ + ++V ++ VP DY R + K
Sbjct: 443 LENGATRYLEQLELRERQRTGITTLKVSYNKVHGFYIDVTKANAHLVPVDYIRRQTLKNN 502
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
RY P +K+ ++ A+S + K + + L+ Q H + AA A L ++
Sbjct: 503 ERYLIPELKEYEDKVLTAQSRALALEKQLYEDLLDQLLPHLPALQVSAAAVAELDVL 559
>gi|254972104|gb|ACT98280.1| msh-like protein [Schmidtea mediterranea]
Length = 850
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 159/645 (24%), Positives = 257/645 (39%), Gaps = 116/645 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H + ++F++MG FYELF DA ++ LD+ K GE P G P
Sbjct: 15 QQYLRLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGVPHH 74
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ KL + G V + EQ P KG V+R++ +VT GT+T+ L
Sbjct: 75 AVENYLAKLVQLGESVALCEQIGDPA------TSKGP----VERKVVRIVTPGTITDKAL 124
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A R FG +D+++ R +V + D + L
Sbjct: 125 LQERQD----------NLLAAIWQDARGFGYATLDISSGRF---RVAEPADIETMAAELQ 171
Query: 506 ELRPVEIIKPANMLSPET-ERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
PA +L PET E+ L R+ L PL EF + ET ++
Sbjct: 172 R------TNPAELLYPETFEQMSLIEQRHGLRRR--PLWEF-EPETARQQL--------- 213
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
N Q LT G+ + Q L A G L Y+K +
Sbjct: 214 -----------NLQFGTRDLTGF-GV--------EQAHQALRAAGCLLQYVKDT------ 247
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ L G ++ +++DA NLE+ + S SG + TL A L+H VTA G
Sbjct: 248 ---QRTSLPHIRGITMERQQDGIIMDAATRRNLELTQ-SLSGGTENTLAAILDHSVTAMG 303
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
R+L+ WL P + ++ +RQ A+ L Q E + +L ++ D+ER+LARL S
Sbjct: 304 SRMLKRWLHMPTRDIKVLNDRQQAIGAL----QDLYAELQPSLRQVGDLERILARLALRS 359
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
A + L A Q + A+L+ + + H+L+
Sbjct: 360 ---------------ARPRDLARMRHAF-------QQLPDIHALLKGVNTPHVQHLLSQV 397
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-----YDSACKKVKEIEASLTKH 859
+ +L+ V + G I P ++D D A + +E
Sbjct: 398 GQFDELQDLLERAVVEAPPVLVRDGGVIAPGYNSELDEWRALADGASDYLDRLE------ 451
Query: 860 LKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
++E+ KL DT + G Y ++V VP Y R + K RY P +K+
Sbjct: 452 IREREKLGLDT-LKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAERYIIPELKEYE 510
Query: 920 GELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
++ ++ + + K + + L H + +Q AA A L ++
Sbjct: 511 DKVLTSKGKALAIEKGLYEELFDLLLPHLGELQQSAAALAELDVL 555
>gi|89092115|ref|ZP_01165070.1| DNA mismatch repair protein [Neptuniibacter caesariensis]
gi|89083850|gb|EAR63067.1| DNA mismatch repair protein [Oceanospirillum sp. MED92]
Length = 854
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 165/646 (25%), Positives = 268/646 (41%), Gaps = 116/646 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPER 385
+Q+ K++H D+++F++MG FYELF DA A+ LD+ GE P G P
Sbjct: 14 QQYLRIKAQHPDQLVFYRMGDFYELFYDDAKKAAELLDISLTARGKSAGEPIPMAGIPYH 73
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
V K+ R G V++ EQ P KG V+R + ++T GT+++ L
Sbjct: 74 AAEGYVGKIVRAGESVVICEQVGDPA------TSKGP----VERAVARIITPGTVSDEAL 123
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L N D + L+AL + +G +VD+A+ R L QV D+ D L+S
Sbjct: 124 LDENRD-NLLVALNQVGDE---------YGFAIVDIASGRFSLMQV-DNQDT-----LIS 167
Query: 506 ELRPVEIIKPA-NMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
EL E ++P+ + + E+ A L R L P + W E+ TA
Sbjct: 168 EL---ERLRPSETLFNEESPLATLLEKRK----GLRPQAP-WHFESD-----------TA 208
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
L + V + G G LP ++A G L Y K D
Sbjct: 209 NELLRQQFKVKD--LSGFGCDHLP--------------VAITAAGCLLQYAK----DTQR 248
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
+ D + LDA +NLE+ +N SG TL ++ C T G
Sbjct: 249 TALPHIRRIQIEQHNDC-----VALDAATRKNLEIDQN-LSGGFDNTLAKVIDKCRTPMG 302
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS 744
RLLR WL RP+ + + RQ ++ L+ N F E +K L + D+ER+LAR+ S
Sbjct: 303 SRLLRRWLHRPIQDRATLLARQASIQWLQN-NYKFE-EIQKPLKNIGDIERILARIALRS 360
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGC-ELMDQACSSLGAILENTESRQLHHILTP 803
A + L+ SAL EL Q L+ T++ + +
Sbjct: 361 ---------------ARPRDLERLKSALASLPELQSQ--------LKTTDAPLISELAIQ 397
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD-YDSACKKVKEIEASLTKHLKE 862
P + +L K D N +I GGV + +D +++ I + +L E
Sbjct: 398 ISQFPELSDLL--LKAIID-----NPPVVIRDGGVIAEGFDEELDELRGISENAGAYLIE 450
Query: 863 -QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+ + T I + +G + Y +E+ ++ +P +Y R + K RY TP +K+
Sbjct: 451 LETRERERTGIATLKVGYNRVHGYFIEIGKAQNAELPAEYIRRQTLKNAERYITPELKEF 510
Query: 919 LGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLI 964
+ A+S + K++ ++L+ + + AA A L ++
Sbjct: 511 EDKALSAKSRALAREKALYEQLLETLAAELSPLQDSSAAIAELDVL 556
>gi|407772640|ref|ZP_11119942.1| DNA mismatch repair protein MutS [Thalassospira profundimaris
WP0211]
gi|407284593|gb|EKF10109.1| DNA mismatch repair protein MutS [Thalassospira profundimaris
WP0211]
Length = 907
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 188/421 (44%), Gaps = 83/421 (19%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPERN 386
Q+ E K ++ D ++F++MG FYELF DA A+ LD+ K E P G P +
Sbjct: 28 QFLEIKEQYQDCLLFYRMGDFYELFFDDAVKAAEALDIALTKRGKHQGNEIPMAGVPVHS 87
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+++L RKG+RV V EQ E P + K++G+K VVKR + ++T GTLTE LL
Sbjct: 88 HETYLQRLIRKGFRVAVCEQMEDPAE----AKKRGAK-SVVKRGVVRLITPGTLTEDSLL 142
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A +YL A++E G+ +D++T + + + L L+
Sbjct: 143 DARRH-NYLAAVSEVRGK---------IGLAWLDMSTGDFF----VQPCEMAGLGAALAR 188
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
L P EI+ ML+ I +N + P + F DAE L +K +Y
Sbjct: 189 LDPGEILFSEKMLNRSEVFDIYAEYKNIITPQ--PTARF-DAENAQLRLKKLY------- 238
Query: 567 LNKADSNVANSQAEGDGLTCLPGI-LSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
E + L G ++E LSA G + Y++ +
Sbjct: 239 -------------EVEALDAFGGFEIAE-----------LSAAGALIDYVELT------- 267
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
K ++ + +A+ M +DA +LE+ + ++SG+ G+L + ++ T G
Sbjct: 268 --QKGQMPRLAPPTRVAEGAAMEIDAATRRSLELIQ-TQSGERKGSLLSVIDRTRTGAGA 324
Query: 686 RLLRTWLARPLYNSGLIRERQDAVA------GLRGVNQPFALEFRKALSRLPDMERLLAR 739
RLL L+ PL N+ + +R D V GLR + R AL PD+ER L+R
Sbjct: 325 RLLAARLSAPLTNADEVNKRLDLVEYFHDRDGLRS-------DLRAALGECPDIERALSR 377
Query: 740 L 740
L
Sbjct: 378 L 378
>gi|396082264|gb|AFN83874.1| MutS-like DNA mismatch repair protein [Encephalitozoon romaleae
SJ-2008]
Length = 914
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 129/247 (52%), Gaps = 20/247 (8%)
Query: 265 SDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFL 324
++ L +D + G+ + + ++ + D RD R+ GD YDP TL +P +
Sbjct: 69 TEVLQGRYDKAIGGEEGDEKKREDKERRYRFMEDIRDKNGRKKGDEGYDPSTLLIPENEY 128
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFP 383
L+ +KQ+W+ K +H D ++FFK GKFYEL+E DA +GAK DL+ + GFP
Sbjct: 129 NRLTPFEKQFWDIKKEHFDTIVFFKKGKFYELYENDALIGAKLFDLRITDRVNMRMSGFP 188
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRR-------KEKG-SKDKVVKREICAVV 435
E + + GY++ V+Q+E ++R KE+G +K+K+++RE+ ++
Sbjct: 189 ESSLDYWTRRFLEHGYKIARVDQSENMIGKQIRERDEMSKSKERGIAKNKIIRRELKEII 248
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFG-ICVVDVATSRIILGQVMDD 494
T+GT+ + +S++ YLM++ + D C+ +C ++ TS ++ + +
Sbjct: 249 TQGTIYNMDYISSSV-PMYLMSVA---------TDDICYSEVCRGEIHTSVLLYDASIGE 298
Query: 495 LDCSVLC 501
+ S C
Sbjct: 299 IYFSSFC 305
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 34/323 (10%)
Query: 647 MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQ 706
M +D L N+EVF+N+ +G TL+ ++ TA G+RLLR W+ PL I RQ
Sbjct: 392 MSIDETTLWNMEVFKNNYNGTDEKTLFKTVDFTSTAGGQRLLRRWMMAPLIKKDDIVRRQ 451
Query: 707 DAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ 766
+ + + R L R+ D ERLL++L+ NG + A K L
Sbjct: 452 EMGRMFKEIETS---RLRDVLVRIGDGERLLSKLY-----NG----------NPAVKDLS 493
Query: 767 EFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK-GLPAIVSILKHFKDAFDWVE 825
+FI + C +A + LG ++ + I + I IL + +D +
Sbjct: 494 KFIGCIDTCR---EAFNILGHMMRERDCGNTRAIAEKAEECFRKIDEILTWHRRVYDVTD 550
Query: 826 ANNSGRIIPHGGVDMDYDSACKKVKE---IEASLTKHLKEQRKLLGDTSITYVTIGKDLY 882
I P + + D C + E IE L ++L+ QR L S+ + IGK+++
Sbjct: 551 TE----ISPG---EQNEDELCHLISEKEKIEDDLNEYLQRQRDRLRSPSVKFKDIGKEIF 603
Query: 883 LLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
+EVP+ + VP DY + SS K RY++ ++KKL+ + E + S+L+R IG
Sbjct: 604 QIEVPKETK--VPPDYYIMSSTKNTNRYYSRDLKKLVERYIECEERIFQSKGSLLRRAIG 661
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
H +RQM A + L
Sbjct: 662 VLLPHVIFFRQMFWEIANIDCYL 684
>gi|401827705|ref|XP_003888145.1| MutS-like mismatch repair ATPase [Encephalitozoon hellem ATCC
50504]
gi|392999345|gb|AFM99164.1| MutS-like mismatch repair ATPase [Encephalitozoon hellem ATCC
50504]
Length = 918
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 22/213 (10%)
Query: 300 RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEM 359
RD R+ GD YDP TL++P D + +KQ+W+ K H D ++FFK GKFYEL+E
Sbjct: 108 RDKNGRKRGDEGYDPSTLFIPHDEYSRFTPFEKQFWDIKKDHFDTIVFFKKGKFYELYEN 167
Query: 360 DAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTE------TPEQ 412
DA +GAK DL+ + GFPE + + GY++ V+Q+E E+
Sbjct: 168 DALIGAKLFDLRITDRVNMKMAGFPESSLDYWARRFLEHGYKIARVDQSENMIGKQIRER 227
Query: 413 LELRRKEKGS--KDKVVKREICAVVTKGTLTEGELL-SANPDASYLMALTESNQSPASQS 469
E+ + +KG KDK++KRE+ ++T+GT+ + + SA P YLM++ +
Sbjct: 228 DEMSKSKKGGIMKDKIIKRELKEIITQGTIYNIDYIKSAIP--MYLMSVA---------T 276
Query: 470 TDRCFG-ICVVDVATSRIILGQVMDDLDCSVLC 501
D C+ +C ++ TS ++ + ++ S C
Sbjct: 277 DDVCYSEVCQGEIHTSVLLYDASIGEIYFSSFC 309
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 150/327 (45%), Gaps = 34/327 (10%)
Query: 643 KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLI 702
K M++D L N+E+F+N+ +G TL+ ++ T G+RLLR W+ PL I
Sbjct: 392 KSRVMIIDDITLRNMEIFKNNYNGTGEKTLFRAVDFTSTPGGQRLLRKWVMAPLVKKDDI 451
Query: 703 RERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAK 762
RQ+ +G+ R L R+ D ERLL++L+ N N +
Sbjct: 452 VRRQEMGQMFKGMETS---RLRDTLQRIGDGERLLSKLY--------NGNPLA------- 493
Query: 763 KQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLP-AIVSILKHFKDAF 821
K L +FI + C +A +LG ++ +E + + I IL + +
Sbjct: 494 KDLSKFIVCVDTCR---EAFDTLGQMMRESECVNAKAVAERSEECSRKINEILGWHRKVY 550
Query: 822 DWVEANNSGRIIPHGGVDMDYDSACKKVKE---IEASLTKHLKEQRKLLGDTSITYVTIG 878
D +A I P + + D C + E IE L ++L++QR L SI + IG
Sbjct: 551 DVTDAE----ISPG---EHNEDELCHLLCEKERIENDLNEYLQKQRDRLKLGSIRFKDIG 603
Query: 879 KDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQ 938
K+++ +EVP+ ++ P DY + SS K RY++ ++KKL+ + E + S+L+
Sbjct: 604 KEIFQIEVPKEIKA--PSDYYIMSSTKTTNRYYSRDLKKLVERYVECEERIFQSKGSLLR 661
Query: 939 RLIGQFCEHHNKWRQMVAATAGLTLIL 965
R I H +RQM A + L
Sbjct: 662 RAIDMLLPHAIFFRQMFCELASIDCYL 688
>gi|104783162|ref|YP_609660.1| DNA mismatch repair protein MutS [Pseudomonas entomophila L48]
gi|122402199|sp|Q1I659.1|MUTS_PSEE4 RecName: Full=DNA mismatch repair protein MutS
gi|95112149|emb|CAK16876.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Pseudomonas entomophila L48]
Length = 857
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 150/632 (23%), Positives = 247/632 (39%), Gaps = 122/632 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+W+ K +H D+++F++MG FYE+F DA AK LD+ Q P CG P
Sbjct: 12 QQYWKLKHQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSIPMCGIPFH 71
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + KL + G V++ EQ P KG V+R++ ++T GT+++ L
Sbjct: 72 SLEGYLAKLVKLGESVVICEQIGDPA------TSKGP----VERQVVRIITPGTISDEAL 121
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L D N A +R FG+ V+D+ + + ++ + LL+
Sbjct: 122 LDERRD----------NLIAALLGDERLFGLAVLDITSGNFTVQEIKGWEN------LLA 165
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
EL E I P +L P+ L + P P WD + K++ + +
Sbjct: 166 EL---ERINPVELLIPDDWPQGLPAEKRPGARRRAP----WDFDRDTAR-KSLCQQFATQ 217
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
L + G CL G E T L L+ +D+T++
Sbjct: 218 DLKGFGCDKLTLAIGAAG--CLLGYAKETQRTALP----------HLRSLRHERMDDTVI 265
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
LDA + NLE+ N +G TL + ++ C TA
Sbjct: 266 -----------------------LDAASRRNLELDIN-LAGGRDNTLQSVIDRCQTAMAS 301
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE-FRKALSRLPDMERLLARLFASS 744
RLL WL RPL + +++ RQD++ R + + E + L + D+ER+LAR
Sbjct: 302 RLLTRWLNRPLRDLKVLKARQDSI---RCLLDGYRFEKLQPQLKEIGDIERILAR----- 353
Query: 745 EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+ +A + L AL + A + L A H+
Sbjct: 354 ----------IGLRNARPRDLARLRDALGALPELQNAMAELEA----------PHL---- 389
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-DMDYDSACKKVKEIEASLTKHL--- 860
L AI + +N +I GGV YDS ++ + + + L
Sbjct: 390 ARLAAITGTYPELAGLLERAIIDNPPAVIRDGGVLKTGYDSELDELLAMSENAGQFLIDL 449
Query: 861 ---KEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK- 916
++ R L + + Y + Y +E+P P DY R + KG R+ TP +K
Sbjct: 450 EAREKARTGLANLKVGYNRVHG--YYIELPTKQAEQAPGDYIRRQTLKGAERFITPELKA 507
Query: 917 ---KLLGELSQAESEKESALKSILQRLIGQFC 945
K L S+A + ++ ++L+ LIG
Sbjct: 508 FEDKALSAKSRALAREKMLYDALLETLIGHLA 539
>gi|383790736|ref|YP_005475310.1| DNA mismatch repair protein MutS [Spirochaeta africana DSM 8902]
gi|383107270|gb|AFG37603.1| DNA mismatch repair protein MutS [Spirochaeta africana DSM 8902]
Length = 864
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 144/607 (23%), Positives = 250/607 (41%), Gaps = 107/607 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY-MKGEQPHCGFPERNFSMN 390
+Q+ K + D ++FF++G FYE+F DA A L L + P CG P +
Sbjct: 9 QQYRRIKDQQRDAILFFRLGDFYEMFFHDAKEAAAVLGLTLTQRNGVPMCGVPYHAANTY 68
Query: 391 VEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANP 450
+ +L R G ++ + EQT+ P + K+ RE+ V++ G +TE + L +N
Sbjct: 69 IPRLLRAGKKIAICEQTQLP----------AAGSKLATREVTQVISPGIITEQDFLDSNR 118
Query: 451 DASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPV 510
D +YL+A+ Q+T+ C + +D++T R L + L L+ L P
Sbjct: 119 D-NYLVAVCR-------QATELC--MAWIDISTGRFELHSYPWEQAVPGLRQELARLAPR 168
Query: 511 EIIKPANML-SPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E+I ++L +P E +LR +R+ +VN W + ++ Y R+T
Sbjct: 169 ELIVQESLLETPVGE--VLRSSRDVVVNRYPD----W-----LFSVEESYRRLT------ 211
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
+ G GL D L+ G L Y++++ A
Sbjct: 212 --DYFGTTNLRGFGL--------------DENDPGLAPAGIVLEYIQEN---------AG 246
Query: 630 FELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLR 689
L + G + ++ LD NLE+ EN + G + TL+ LN+ TA G R L
Sbjct: 247 SRLSHVNSIGKLRDGDFVPLDEATQRNLELVENLQDGGTEFTLFRVLNYTETAMGARALA 306
Query: 690 TWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASS----- 744
WL +PL I +RQ VA L +Q E R+ ++ D+ERL +++
Sbjct: 307 RWLKQPLRRIDPICDRQQRVAQLYH-HQTTLSEIRECIAGARDLERLGSKIGMGRCNPRE 365
Query: 745 -EANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTP 803
EA G V+ +D +Q E + +A L A++ + + + TP
Sbjct: 366 MEAVGATLAVVLQLQDLLARQ-PELLPVFPVARESGEAARKLHALIAHAIAD--NPPTTP 422
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQ 863
G G G + +D+ +++++ + + L++
Sbjct: 423 GDG-----------------------------GCIRTGFDAEVDRLRQLHDNSGEILQDY 453
Query: 864 -RKLLGDTSITYVTIGKDLYL---LEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
RKL +T I + + + L +EV + R VP + R S R+ T + ++
Sbjct: 454 IRKLQQETGIPSLKVKYNRILGHFIEVTRTHRDKVPESFIPRQSLTQSDRFTTTELNRIE 513
Query: 920 GELSQAE 926
L+ AE
Sbjct: 514 SSLNSAE 520
>gi|84684657|ref|ZP_01012558.1| DNA mismatch repair protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667636|gb|EAQ14105.1| DNA mismatch repair protein [Maritimibacter alkaliphilus HTCC2654]
Length = 874
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 186/418 (44%), Gaps = 79/418 (18%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHCGFPERN 386
Q+ E KS + D ++F++MG FYELF DA A+ LD+ +++ + P CG P
Sbjct: 4 QFLEIKSGYPDALLFYRMGDFYELFFDDAVAAAEALDIALTKRGKHLGDDIPMCGVPVHA 63
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
+ L RKG+RV V EQ E P + K++GSK VVKR++ +VT GTLTE LL
Sbjct: 64 AEGYLLTLIRKGFRVAVCEQMEDPAE----AKKRGSK-SVVKRDVVRLVTPGTLTEDSLL 118
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A ++L A E A + VD++T ++ C
Sbjct: 119 DARRH-NFLAAFAEVRDEGA---------LAWVDISTGAF-----------RIMQC---- 153
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAES 566
P + L PE R R V +SE +AE T L + ++ IT
Sbjct: 154 --------PRSRLGPELARIAPRE---------VVVSESSEAELTEL-VTDLGAAITPLG 195
Query: 567 LNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL---KKSFLDET 623
DS A + C +S L + G L ALG + YL +K L
Sbjct: 196 RAAFDSTGAEKR------LCDLFSVSTLDAFGTFSRADLGALGAIVEYLDITQKGKL--P 247
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
LLR E+ + M +DA NLE ++ +G G+L + ++ VTA
Sbjct: 248 LLRPPVVEI----------SQAAMQIDAATRRNLE-LTHALAGGRDGSLLSTIDKTVTAG 296
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARL 740
G RLL L+ P I R +AVA L V++ F + R AL ++PD++R ++RL
Sbjct: 297 GGRLLERRLSSPSRTLDTIESRLEAVAFL--VDESLFRADLRDALRKVPDIDRAVSRL 352
>gi|421303752|ref|ZP_15754413.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17484]
gi|395898169|gb|EJH09114.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17484]
Length = 835
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 146/651 (22%), Positives = 269/651 (41%), Gaps = 146/651 (22%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ------PHCGFPER 385
+Q+ + K ++ D + F+MG FYELF DA A+ L++ + P G P
Sbjct: 2 QQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEISLTSRNKNADNPIPMAGVPYH 61
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ ++ L +GY+V + EQ E P+Q VVKRE+ V+T GT+ +
Sbjct: 62 SAQQYIDVLIEQGYKVAIAEQMEDPKQ----------AVGVVKREVVQVITPGTVVD--- 108
Query: 446 LSANPDA--SYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
S+ PD+ ++L+A+ FG+ +D+ T V LD +++C
Sbjct: 109 -SSKPDSQNNFLVAIDRDGSQ---------FGLAYMDLVTGDFY---VTGLLDFTLVCGE 155
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
+ L+ E++ ++ E E IL N +++ Y +
Sbjct: 156 IRNLKAREVVLGYDL--SEEEEQILSRQMNLVLS---------------------YEKEG 192
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
E L+ DS +A+ + +A L Y+ ++ + E
Sbjct: 193 FEDLHLLDSRLASVEQ--------------------------AASSKLLQYVHRTQMREL 226
Query: 624 --LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
L ++E+ K ++ +D +L++ EN+RSG G+L+ L+ T
Sbjct: 227 NHLKPVIRYEI-----------KDFLQMDYATKASLDLVENARSGKKQGSLFWLLDETKT 275
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK------ALSRLPDMER 735
A G RLLR+W+ RPL + I +RQ+ V Q F F + +L + D+ER
Sbjct: 276 AMGMRLLRSWIHRPLIDKERIIQRQEVV-------QVFLDHFFERSDLTDSLKGVYDIER 328
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L +R+ + G+ + K +L QL +S + + AILE E
Sbjct: 329 LASRV-----SFGKTNPKDLL-------QLATTLS----------SVPRIRAILEGMEQP 366
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEA 854
L +++ G+P + S++ A + +I GG + +D K + +
Sbjct: 367 ALAYLIAQLDGIPELESLIS-------AAIAPEAPHVITDGGIIRTGFDETLDKYRRVLR 419
Query: 855 SLTKHLKE----QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRY 910
T + E +R+ G +++ KD Y V S G+VP + +++ K R+
Sbjct: 420 EGTGWIAEIEAKERENSGISTLKIDYNKKDGYYFHVTNSQLGNVPAHFFRKATLKNSERF 479
Query: 911 WTPNIKKLLGELSQAESEKESALKSILQRL---IGQFCEHHNKWRQMVAAT 958
T + ++ G++ +A + + I R+ +G++ + Q +A
Sbjct: 480 GTEELARIEGDMLEAREKSANLEYEIFMRIREEVGKYIQRLQALAQGIATV 530
>gi|425472142|ref|ZP_18850993.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9701]
gi|389881833|emb|CCI37648.1| DNA mismatch repair protein mutS [Microcystis aeruginosa PCC 9701]
Length = 882
Score = 114 bits (285), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 186/431 (43%), Gaps = 61/431 (14%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-------GEQPH 379
L+ + + E K + + ++ +++G F+E F DA + ++EL+L G
Sbjct: 30 LTPMYQHYVEVKETYPNALLLYRVGDFFECFFQDAVIISRELELVLTSKEGGKGIGRVAM 89
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P L KGY V + +Q E E ++ ++V+R I ++T GT
Sbjct: 90 TGVPHHALERYSRLLVEKGYAVAICDQVEDS-------TEAAAEKRLVERAITKLLTPGT 142
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
LT+ +L+A + ++L A+ + ++ +G+ D++T Q D +
Sbjct: 143 LTDEGMLNAKKN-NFLAAVVITGEN---------WGLAYSDISTGEFYTTQASD---LTA 189
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L LS L+P EI+ P N +P+ R + ++ + +P D+ L +NI+
Sbjct: 190 LSLELSRLQPSEILFPIN--APDLNRILRPGEKSDHLPPCLP-----DSFCYSLRPQNIF 242
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
E+ N+ EG G LP + A GG L Y++ +
Sbjct: 243 T--LTEAKNRLLITYKMRSLEGMGCEHLP--------------LAIRAAGGLLEYIEDT- 285
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
K +P + +++LD NLE+ + R G G+L ++
Sbjct: 286 --------QKANQVPLQPLKTYSISEFLILDGQTRRNLEITQTVRDGSFYGSLLWAIDRT 337
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
TA G R LR WL +PL +S IR RQD + L+ N + R+ L + D+ERL R
Sbjct: 338 CTAMGSRALRRWLLQPLLDSRGIRARQDTIQELKD-NPALRQDIRQKLREIYDIERLSGR 396
Query: 740 LFASSEANGRN 750
+ A + AN R+
Sbjct: 397 VGAGT-ANARD 406
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,855,830,805
Number of Sequences: 23463169
Number of extensions: 722946473
Number of successful extensions: 4309024
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5640
Number of HSP's successfully gapped in prelim test: 9741
Number of HSP's that attempted gapping in prelim test: 4025552
Number of HSP's gapped (non-prelim): 173852
length of query: 987
length of database: 8,064,228,071
effective HSP length: 153
effective length of query: 834
effective length of database: 8,769,330,510
effective search space: 7313621645340
effective search space used: 7313621645340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)