BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001977
(987 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O04716|MSH6_ARATH DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana GN=MSH6 PE=1
SV=2
Length = 1324
Score = 1209 bits (3129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/1022 (62%), Positives = 767/1022 (75%), Gaps = 65/1022 (6%)
Query: 1 MAPGKRQNNGRSPLVNPQRQITSFFSKSNSPSPSPTISKLNPNKSNSNP----------- 49
MAP +RQ +GRSPLVN QRQITSFF KS S S SP+ S + P
Sbjct: 1 MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS 60
Query: 50 ------------NPNPNSNSNRTPSPSPSPTTPSPLQSNPKKSRLVIGQTPSPPPSTPAA 97
NPNP+SN SPSP P TPSP+QS KK LVIGQTPSPP S
Sbjct: 61 PSPSPPKKTPKLNPNPSSNLP-ARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSV--- 116
Query: 98 AKSYGEDVLRKRIRVYWPLDKAWYEGCVKSFDKECNKHLVQYDDGEDELLDLGKEKIEWV 157
+YG++V+ K++RVYWPLDK WY+G V +DK KH+V+Y+DGE+E LDLGKEK EWV
Sbjct: 117 VITYGDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
Query: 158 --QESVSLLKRLRR--DSFKKVVVE--DDEEMENVEDEISDDRSDSSDDDWNKNVGKEDV 211
++S RL+R + +KVV + DD EM NVE++ D DSSD+DW KNVGKE
Sbjct: 177 VGEKSGDRFNRLKRGASALRKVVTDSDDDVEMGNVEED-KSDGDDSSDEDWGKNVGKEVC 235
Query: 212 -SEDEEVDLVDEQE-----------------NKVLR--GRKRKSS------GVKKSKSDG 245
SE+++V+LVDE E N+V + RKRK+S G KKSK+D
Sbjct: 236 ESEEDDVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDT 295
Query: 246 NAVNADFKSPIIKPVKIFG-SDKLSNGF-DNPVMGDVSERFSAREADKFHFLGPDRRDAK 303
+ FK+ +++P K G +D++ G DN + GD RF AR+++KF FLG DRRDAK
Sbjct: 296 GTILKGFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFLGVDRRDAK 355
Query: 304 RRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHV 363
RRRP D YDPRTLYLPPDF++ L+ GQ+QWWEFK+KHMDKV+FFKMGKFYELFEMDAHV
Sbjct: 356 RRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHV 415
Query: 364 GAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSK 423
GAKELD+QYMKGEQPHCGFPE+NFS+N+EKL RKGYRVLVVEQTETP+QLE RRKE GSK
Sbjct: 416 GAKELDIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSK 475
Query: 424 DKVVKREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVAT 483
DKVVKRE+CAVVTKGTLT+GE+L NPDASYLMALTE +S + + + FG+C+VDVAT
Sbjct: 476 DKVVKREVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAEHNFGVCLVDVAT 535
Query: 484 SRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLS 543
+IILGQ DD DCS L CLLSE+RPVEIIKPA +LS TER I+R TRNPLVN+LVPLS
Sbjct: 536 QKIILGQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLS 595
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
EFWD+E T+ E+ IY RI + + + + + GDG + LP +LSEL + +GS
Sbjct: 596 EFWDSEKTIYEVGIIYKRINCQP---SSAYSSEGKILGDGSSFLPKMLSELATEDKNGSL 652
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
LSALGG ++YL+++FLDE+LLRFAKFE LP F ++ +K +MVLDA ALENLE+FENS
Sbjct: 653 ALSALGGAIYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENS 712
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
R+G SGTLYAQLN C+TA GKRLL+TWLARPLYN+ LI+ERQDAVA LRG N P++LEF
Sbjct: 713 RNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLEF 772
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACS 783
RK+LSRLPDMERL+AR+F+S EA+GRN +KVVLYED AKKQ+QEFIS L GCE M +ACS
Sbjct: 773 RKSLSRLPDMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACS 832
Query: 784 SLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYD 843
SL AIL++ SR+L H+LTPG+ LP I S +K+FKDAFDWVEA+NSGR+IPH G D +YD
Sbjct: 833 SLRAILKHDTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYD 892
Query: 844 SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSS 903
ACK V+E E+SL KHLKEQRKLLGD SI YVT+GKD YLLEVPESL GSVP DYEL SS
Sbjct: 893 CACKTVEEFESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSS 952
Query: 904 KKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTL 963
KKG RYWTP IKKLL ELSQA+SEKESALKSI QRLIG+FCEH KWRQ+V+ATA L +
Sbjct: 953 KKGVSRYWTPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDV 1012
Query: 964 IL 965
++
Sbjct: 1013 LI 1014
>sp|P54276|MSH6_MOUSE DNA mismatch repair protein Msh6 OS=Mus musculus GN=Msh6 PE=1 SV=3
Length = 1358
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 301/866 (34%), Positives = 447/866 (51%), Gaps = 85/866 (9%)
Query: 152 EKIEWVQESVSLLKRLRRDSFKKVVVEDDE-EMENVEDEIS-DDRSDSSDDDWNKNVGKE 209
E E Q SV +R R K+ V+ D E ++ + E D + + S DD + VG
Sbjct: 226 ESEEEAQPSVQGPRRSSRQVKKRRVISDSESDIGGSDVEFKPDTKQEGSSDDASSGVGDS 285
Query: 210 DVSEDEEVDLVDEQENKVLRGRKRKSSGVKKS--KSDGNAVNADFKSPIIKPVKIFGSDK 267
D E++ + K R + +KS K G+A A +PI+ K
Sbjct: 286 D---SEDLGTFGKGAPKRKRAMVAQGGLRRKSLKKETGSAKRA---TPILSETK-----S 334
Query: 268 LSNGFDNPVMGDVSERFSAREADK------FH----FLGPD-RRDAKRRRPGDVYYDPRT 316
+ F P + S D +H +L P+ RRD RRRP ++P T
Sbjct: 335 TLSAFSAPQNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTT 394
Query: 317 LYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGE 376
LY+P +FL + + G ++WW+ KS++ D VIF+K+GKFYEL+ MDA +G EL L +MKG
Sbjct: 395 LYVPEEFLNSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMKGN 454
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG--SK-DKVVKREICA 433
H GFPE F + L +KGY+V VEQTETPE +E R ++ SK D+VV+REIC
Sbjct: 455 WAHSGFPEIAFGRFSDSLVQKGYKVARVEQTETPEMMEARCRKMAHVSKFDRVVRREICR 514
Query: 434 VVTKGTLTEGELLSANPD---ASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
++TKGT T +L +P + YL++L E + + + R +G+C VD + + +GQ
Sbjct: 515 IITKGTQTY-SVLDGDPSENYSRYLLSLKEKEEETSGHT--RVYGVCFVDTSLGKFFIGQ 571
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAET 550
DD CS L++ PV+I+ LS ET+ + + L L+P S+FWDA
Sbjct: 572 FSDDRHCSRFRTLVAHYPPVQILFEKGNLSTETKTVLKGSLSSCLQEGLIPGSQFWDATK 631
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDS--------GS 602
T+ +L + N GD T LP +L + S DS
Sbjct: 632 TL------------RTLLEGGYFTGN----GDSSTVLPLVLKGMTSESDSVGLTPGEESE 675
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFE------------LLPCSGFGDMAKKPYMVLD 650
LSALGG +FYLKK +D+ LL A FE + P + F +++ MVLD
Sbjct: 676 LALSALGGIVFYLKKCLIDQELLSMANFEEYFPLDSDTVSTVKPGAVFTKASQR--MVLD 733
Query: 651 APALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVA 710
A L NLE+F N +G + GTL +L+ C T FGKRLL+ WL PL + I +R DAV
Sbjct: 734 AVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLDAVE 793
Query: 711 GLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS--NKVVLYEDA--AKKQL 765
L V E L +LPD+ERLL+++ S +N ++ ++YE+ +KK++
Sbjct: 794 DLMAVPDKVT-EVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDSRAIMYEETTYSKKKI 852
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILT-----PGKGLPAIVSILKHFKDA 820
+F+SAL G ++M + L + S+ L ++T P P + + L+ + A
Sbjct: 853 IDFLSALEGFKVMCKVSGLLEEVAGGFTSKTLKQVVTLQSKSPKGRFPDLTAELQRWDTA 912
Query: 821 FDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKD 880
FD +A +G I P G D DYD A ++E E SL ++L +QR LG SI Y IG++
Sbjct: 913 FDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGRN 972
Query: 881 LYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQR 939
Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L L AE ++++LK ++R
Sbjct: 973 RYQLEIPENFATRNLPEEYELKSTKKGCKRYWTKTIEKKLANLINAEERRDTSLKDCMRR 1032
Query: 940 LIGQFCEHHNKWRQMVAATAGLTLIL 965
L F ++H W+ V A L ++L
Sbjct: 1033 LFCNFDKNHKDWQSAVECIAVLDVLL 1058
>sp|P52701|MSH6_HUMAN DNA mismatch repair protein Msh6 OS=Homo sapiens GN=MSH6 PE=1 SV=2
Length = 1360
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 285/824 (34%), Positives = 434/824 (52%), Gaps = 61/824 (7%)
Query: 190 ISDDRSDSSDDDWN-KNVGKEDVSEDEEVDLVDEQEN-------KVLRGRKRKSSG---V 238
ISD SD D K KE+ S DE V + E+ KV R RKR +G +
Sbjct: 251 ISDSESDIGGSDVEFKPDTKEEGSSDEISSGVGDSESEGLNSPVKVARKRKRMVTGNGSL 310
Query: 239 KKSKSDGNAVNADFKSPII-----KPVKIFGSDKLSNGFDNPVMG-DVSERFSAREADKF 292
K+ S +A ++ I ++ F + + S + G D S R + +
Sbjct: 311 KRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWYHETL 370
Query: 293 HFLGPD-RRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMG 351
+L + RRD RRRP +D TLY+P DFL + + G ++WW+ KS++ D VI +K+G
Sbjct: 371 EWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVICYKVG 430
Query: 352 KFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPE 411
KFYEL+ MDA +G EL L +MKG H GFPE F + L +KGY+V VEQTETPE
Sbjct: 431 KFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTETPE 490
Query: 412 QLELRRKEKG---SKDKVVKREICAVVTKGTLTEGELLSANPD---ASYLMALTESNQSP 465
+E R ++ D+VV+REIC ++TKGT T +L +P + YL++L E +
Sbjct: 491 MMEARCRKMAHISKYDRVVRREICRIITKGTQTYS-VLEGDPSENYSKYLLSLKEKEEDS 549
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
+ + R +G+C VD + + +GQ DD CS L++ PV+++ LS ET+
Sbjct: 550 SGHT--RAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSKETKT 607
Query: 526 AILRHTRNPLVNDLVPLSEFWDAET---TVLEIKNIYNRITAESLNKADSNVANSQAEGD 582
+ L L+P S+FWDA T+LE + +++ + +E D
Sbjct: 608 ILKSSLSCSLQEGLIPGSQFWDASKTLRTLLEEEYFREKLSDGIGVMLPQVLKGMTSESD 667
Query: 583 GLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFE--------LLP 634
+ PG SEL LSALGG +FYLKK +D+ LL A FE +
Sbjct: 668 SIGLTPGEKSEL---------ALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDTVS 718
Query: 635 CSGFGDMAKKPY--MVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWL 692
+ G + K Y MVLDA L NLE+F N +G + GTL +++ C T FGKRLL+ WL
Sbjct: 719 TTRSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWL 778
Query: 693 ARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLF-ASSEANGRNS 751
PL N I +R DA+ L V + E + L +LPD+ERLL+++ S +N
Sbjct: 779 CAPLCNHYAINDRLDAIEDLMVVPDKIS-EVVELLKKLPDLERLLSKIHNVGSPLKSQNH 837
Query: 752 --NKVVLYEDA--AKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILT----- 802
++ ++YE+ +KK++ +F+SAL G ++M + + + + +S+ L +++
Sbjct: 838 PDSRAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVADGFKSKILKQVISLQTKN 897
Query: 803 PGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKE 862
P P + L + AFD +A +G I P G D DYD A ++E E SL ++L++
Sbjct: 898 PEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEK 957
Query: 863 QRKLLGDTSITYVTIGKDLYLLEVPESLRG-SVPRDYELRSSKKGFFRYWTPNIKKLLGE 921
QR +G +I Y IG++ Y LE+PE+ ++P +YEL+S+KKG RYWT I+K L
Sbjct: 958 QRNRIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLAN 1017
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
L AE ++ +LK ++RL F +++ W+ V A L ++L
Sbjct: 1018 LINAEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLL 1061
>sp|Q9VUM0|MSH6_DROME Probable DNA mismatch repair protein Msh6 OS=Drosophila
melanogaster GN=Msh6 PE=1 SV=2
Length = 1190
Score = 337 bits (865), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 237/709 (33%), Positives = 359/709 (50%), Gaps = 62/709 (8%)
Query: 291 KFHFLGPDR-RDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFK 349
K FL PD+ +D + RRP YD TL++P FL LS G +QWW KS + D V+FFK
Sbjct: 224 KLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCVLFFK 283
Query: 350 MGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTET 409
+GKFYEL+ MDA VG EL YM+GE H GFPE +F L +G++V VEQTET
Sbjct: 284 VGKFYELYHMDADVGVNELGFTYMRGEFAHSGFPEISFDKMSTILVDRGFKVARVEQTET 343
Query: 410 PEQLELRRKE-KGSK-DKVVKREICAVVTKGTLTEGELLSANPDA--SYLMALTESNQSP 465
P+ + R K K +K DKVV REIC + +GT G P+ +Y++A+ E ++
Sbjct: 344 PDMMTERCKRIKATKFDKVVAREICQITNRGTQVFGSQCKIGPNHQPNYMLAIVEKDEGT 403
Query: 466 ASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETER 525
S+ +G+C +D + LG+ DD +CS L L+S PV + + LS T++
Sbjct: 404 CSR-----YGVCFIDTSIGDFHLGEFEDDKNCSRLLTLVSHHMPVLFLNEKSALSQRTQQ 458
Query: 526 AILRHTRNPLVNDLVPLS--EFWDAETTVLEIKNIYNRITAESLNKADSN----VANSQA 579
I+R ++ + VP + AE T +K + R A +D N + Q+
Sbjct: 459 -IVRTVLGGILKEPVPGNGKHACSAEKT---LKLLAERYYAGP--GSDDNWPLVLRTMQS 512
Query: 580 EGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFEL-LPCSGF 638
+ D L P D+ L ALG +F++ K L+ +L A+++L +P
Sbjct: 513 DMDHLGLTP---------NDNYKLALKALGQCIFFIHKCKLEPKVLPMARYQLYVPPDQL 563
Query: 639 GDMA-------KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTW 691
D ++ +MVLDA L NL + S L + L+HC T FGKRLL W
Sbjct: 564 ADAKPAVASTLRRSHMVLDATTLSNLRIIGEEHS------LLSTLDHCCTKFGKRLLHHW 617
Query: 692 LARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR--LFASSEANG 748
L P + +I+ERQDA+ L + P L E R L+ +PD ER LA+ LF + +
Sbjct: 618 LCAPSCDVSVIKERQDAIGEL--IRMPTELQEVRALLAPMPDFERNLAQIHLFGNKQIKQ 675
Query: 749 RNS--NKVVLYEDAA--KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPG 804
+ ++ +L+E+ K++LQ F++ L G + + ++ + T +++ + G
Sbjct: 676 MDHPDSRAILFEEKLYNKQKLQGFMAVLKGFNDLTK-LPTMFHQCKTTLLKRITQLPESG 734
Query: 805 KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQR 864
P + L++F AFD A +G I P G+D +YD+A + E+E L +L EQ
Sbjct: 735 GSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIGEVEKRLKTYLVEQE 794
Query: 865 KLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKG---FFRYWTPNIKKLLGE 921
+ G ITY K Y L+VPES + Y L KG RY T + LL +
Sbjct: 795 RHFG-CRITYFGSDKKRYQLDVPESHASKANKSYTLEGQTKGKKPSRRYTTAETRALLKD 853
Query: 922 LSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSL 970
+ AE + LK + +RL +F H+++W+Q + A L ++ GSL
Sbjct: 854 MQHAEDTRNMVLKDLARRLFEKFSNHYDQWKQCIDCVANLDVL---GSL 899
>sp|O74502|MSH6_SCHPO DNA mismatch repair protein msh6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=msh6 PE=1 SV=1
Length = 1254
Score = 288 bits (736), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 243/831 (29%), Positives = 398/831 (47%), Gaps = 81/831 (9%)
Query: 169 RDSFKKVVVEDDEEMENVE-DEISDDRSDSSDDDWNKNVGKEDV-SEDEEVDLVDEQENK 226
+ S K +V DDE + VE D IS+ S++S + ++V S DE+VD +
Sbjct: 217 KGSRHKRIVSDDESDDYVEPDHISEASSEAS-------LPIDEVESMDEDVDGYSDHSVS 269
Query: 227 VLRGRKRKSSGVKKSKSDGNAVNADFKSPIIKPV-KIFGSDKLSNGFDNPVMGDVSERFS 285
V +K S +K S+ + S I P + GS + N V+ +R
Sbjct: 270 VAAPIPKKES--RKESSNSLYESYRLGSQIASPSPSVSGSASPTKSNKNGVLNREEKRRQ 327
Query: 286 AREA------DKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQWWEFKS 339
EA +++ +L D RDA + R GD YDPRTLY+PP +KQ+W+ K
Sbjct: 328 RMEAFKKENNERYEWL-LDVRDADQNRVGDPNYDPRTLYIPPSAWATFKPFEKQFWKIKK 386
Query: 340 KHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM-KGEQPHCGFPERNFSMNVEKLARKG 398
MD V+FF+ GKFYEL+E DA +G + L+ + G PE +F + KG
Sbjct: 387 DLMDTVVFFQKGKFYELYENDAAIGHQVFSLKLTDRVNMKMVGIPEASFDYWASQFIAKG 446
Query: 399 YRVLVVEQTETPEQLELRRKEKGSK-DKVVKREICAVVTKGTLTEGELLSANPDASYLMA 457
YR+ V+Q ET E++ +++ K +KVV+R + V+T GTL + +L+++ ++Y MA
Sbjct: 447 YRIARVDQLETALGKEIKDRQRTQKEEKVVQRGLTQVLTSGTLVDEAMLTSDL-STYCMA 505
Query: 458 LTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPAN 517
+ ES QS + + FGIC +D +T + + DD+ + L LL+++RP E+I +
Sbjct: 506 IKESLQSDNEEPS---FGICFIDTSTGGFHMCEFTDDIHRTKLDTLLTQVRPKELILEKS 562
Query: 518 MLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVAN 576
+S ++ RAI + + + N + P +EFWD E EI I +
Sbjct: 563 KISQKSIRAIKYCVSSSSIWNFIKPYTEFWDNERVEREI------IAGDYFK-------- 608
Query: 577 SQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCS 636
+GL P IL +S +SA G +YL++ LD+ + F+ S
Sbjct: 609 -----NGLEGAPKILKSYLS---EKPLAISAFGALFWYLRQLKLDKDMCSMGNFDEYDAS 660
Query: 637 GFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPL 696
+ ++++ L+NLE+F NS G S GTL+ L CVT FGKRL TWL PL
Sbjct: 661 -----QQSTSLLMNGQTLKNLEIFSNSFDGGSEGTLFHLLCRCVTPFGKRLFHTWLCHPL 715
Query: 697 YNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRNSNKVVL 756
+ I R D V L N L +LPD+ERL++R+ A GR+
Sbjct: 716 RSGTAINARLDVVE-LIADNPVIRDTIWGFLHKLPDLERLISRVHA-----GRS------ 763
Query: 757 YEDAAKKQLQEFISALHGCELMDQACSSL-GAILENTESRQLHHILTPGKGLPAIVSILK 815
+ +F+ L G + ++ A L +E E L I+ + P + L+
Sbjct: 764 -------KPADFVRVLEGFQRINSAFDQLREEFMEVAEGTLLGEII---QSAPNMKEELE 813
Query: 816 HFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYV 875
+ AF+W +A+ G P G + +YD++ K E++ L L++ +K L +S+ +
Sbjct: 814 AWTRAFNWQKASEEGVFEPEIGFEAEYDTSQKYQSELKNELYALLEQYKKQLRCSSLNFK 873
Query: 876 TIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKS 935
IGK++Y +EVP ++ VP ++ S K RY+ ++K + +L +AE + +
Sbjct: 874 NIGKEVYQVEVPSDVK--VPVNWCKMSGTKKTNRYYNDELRKKIKKLLEAEELHLAIMSR 931
Query: 936 ILQRLIGQFCEHHNKWRQMVAATAGLTLILLDGSLLHAFLILQSNSCSSEM 986
+ ++ +F ++ +W ++ TA + SL A L C E+
Sbjct: 932 MQEKFYIRFDSNYEQWLALIKYTASIDCFF---SLSQAAAALGEPYCRPEI 979
>sp|Q03834|MSH6_YEAST DNA mismatch repair protein MSH6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MSH6 PE=1 SV=1
Length = 1242
Score = 278 bits (712), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 206/711 (28%), Positives = 348/711 (48%), Gaps = 81/711 (11%)
Query: 275 PVMGDVSERFSAREADKFHFLGPDRRDAKRRRPGDVYYDPRTLYLPPDFLRNLSEGQKQW 334
P S +F+ + +++ +L D RDA+RR D YDPRTLY+P + +KQ+
Sbjct: 260 PSATSKSSKFNKQNEERYQWL-VDERDAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQY 318
Query: 335 WEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPH---CGFPERNFSMNV 391
WE KSK D ++FFK GKF+EL+E DA + DL+ G + + G PE +F
Sbjct: 319 WEIKSKMWDCIVFFKKGKFFELYEKDALLANALFDLKIAGGGRANMQLAGIPEMSFEYWA 378
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSANPD 451
+ + GY+V V+Q E+ E+R KG +VKRE+ ++T GTLT+G++L ++
Sbjct: 379 AQFIQMGYKVAKVDQRESMLAKEMREGSKG----IVKRELQCILTSGTLTDGDMLHSDL- 433
Query: 452 ASYLMALTES-----NQSPASQST------DRCFGICVVDVATSRIILGQVMDDLDCSVL 500
A++ +A+ E N++ ST + FG +D AT + + + DD +C+ L
Sbjct: 434 ATFCLAIREEPGNFYNETQLDSSTIVQKLNTKIFGAAFIDTATGELQMLEFEDDSECTKL 493
Query: 501 CCLLSELRPVEIIKPANMLSPETERAI-LRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
L+S++RP+E++ N LS + + N + N++ EF+D + T EI
Sbjct: 494 DTLMSQVRPMEVVMERNNLSTLANKIVKFNSAPNAIFNEVKAGEEFYDCDKTYAEI---- 549
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV-LSALGGTLFYLKKS 618
I++E + + P +L S D+G +V SA GG L+YLK
Sbjct: 550 --ISSEYFSTEED--------------WPEVLK---SYYDTGKKVGFSAFGGLLYYLKWL 590
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPY-MVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
LD+ L+ + D K + MVLD L+NLE+F NS G GTL+ N
Sbjct: 591 KLDKNLISMKNIKEY------DFVKSQHSMVLDGITLQNLEIFSNSFDGSDKGTLFKLFN 644
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T GKR+++ WL PL I R D+V L Q L + S+LPD+ER
Sbjct: 645 RAITPMGKRMMKKWLMHPLLRKNDIESRLDSVDSLL---QDITLREQLEITFSKLPDLER 701
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
+LAR+ S ++ KV+ A + + E +L +L + + E
Sbjct: 702 MLARIH-SRTIKVKDFEKVI----TAFETIIELQDSLKNNDLKGDVSKYISSFPE----- 751
Query: 796 QLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEAS 855
+V +K + +AF+ +A N I+P G D+++D + +++E+E
Sbjct: 752 -------------GLVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDE 798
Query: 856 LTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNI 915
L + L RK ++I Y GK++Y +E+P S +VP ++ ++ K + RY++ +
Sbjct: 799 LMEILMTYRKQFKCSNIQYKDSGKEIYTIEIPISATKNVPSNWVQMAANKTYKRYYSDEV 858
Query: 916 KKLLGELSQAESEKESALKSILQRLIGQFCEHHNK-WRQMVAATAGLTLIL 965
+ L +++A+ ++ + + RL +F H+N W + A + + +L
Sbjct: 859 RALARSMAEAKEIHKTLEEDLKNRLCQKFDAHYNTIWMPTIQAISNIDCLL 909
>sp|Q55GU9|MSH6_DICDI DNA mismatch repair protein Msh6 OS=Dictyostelium discoideum
GN=msh6 PE=3 SV=1
Length = 1260
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 190/668 (28%), Positives = 331/668 (49%), Gaps = 65/668 (9%)
Query: 312 YDPRTLYLPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ 371
YD RTL++P L S ++Q+W+ KSK+ D V+FFK GKFYEL+E DA +G ++L L+
Sbjct: 345 YDKRTLHIPASCLSKFSPFERQFWDIKSKNYDTVVFFKKGKFYELYESDADIGHQQLHLK 404
Query: 372 YM-KGEQPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGS---KDKVV 427
+ G PE +F+ KL G++V V+Q ET + R+ EKG KD ++
Sbjct: 405 LTDRVNMRMVGVPEMSFNHWASKLIHLGHKVAKVDQMETSIGMAKRQNEKGGRNKKDSII 464
Query: 428 KREICAVVTKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRII 487
+RE+ +++T GTL + ++++ + ++YLMA+ E+ D+ +G+C VDV+
Sbjct: 465 QRELTSILTAGTLLDEQMIT-DQTSTYLMAIKENEY-------DKQYGVCFVDVSIGEFY 516
Query: 488 LGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILR--HTRNPLVNDLVPLSEF 545
L + DD + LL ++ P EI+ SP+T + R T P++N + L E+
Sbjct: 517 LCTIQDDDNRMQFETLLLQMMPKEIVYEKGATSPKTISIMKRVLSTVKPVMNARLSL-EY 575
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
WD T+ I + T E+L + + ++
Sbjct: 576 WDPTDTMERITQLCGGKTPETLCQMKNE----------------------------EYLM 607
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRS 665
ALGG + YL + +++ A+F+ G+ M+LD L NLE+F NS
Sbjct: 608 GALGGCISYLMDIKIGNSVVEQARFKRFNPLDIGNS-----MILDGQCLVNLEIFNNSTD 662
Query: 666 GDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRK 725
G + GTL+ ++ C TAFGKR+ R W+ RPL N I +RQ A+ LR + P L+
Sbjct: 663 GSTEGTLFKLMDRCTTAFGKRMFRQWICRPLANKNAIVDRQKAIEFLR--DSPETLQKVT 720
Query: 726 A-LSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQ-----EFISALH--GCEL 777
A L++LPD+ER++AR+ A + + + +++ K L+ E I ++H C
Sbjct: 721 AILNKLPDLERMIARIRAQTSKISDLISVLNHFDNIHSKLLELLDEAEQIESIHLRSCLF 780
Query: 778 MDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG 837
MD + + + ++ G P + ++ + +F +E + R++P G
Sbjct: 781 MDNQQDNDDI---DEQENSNNNNNIRYSGYPNLKPYIERVRKSFT-IEQD---RVVPSKG 833
Query: 838 VDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
+ +++D ++ +E S KHL+EQ+ I Y +GK++Y +E+P + +P
Sbjct: 834 LFLEFDQCLGNIQSLEQSFAKHLEEQKAHFKCNKIEYKHMGKEIYQIEIPVAFTKKLPAG 893
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAA 957
+ L+SS RY +P + K L L + E K +L++++ F + N ++ +
Sbjct: 894 FSLKSSSSKVNRYHSPFVTKNLTSLLEERDTYEVLSKEVLKKILSNFAIYFNHFQIAITK 953
Query: 958 TAGLTLIL 965
+ L +L
Sbjct: 954 LSQLDCLL 961
>sp|Q9SMV7|MSH7_ARATH DNA mismatch repair protein MSH7 OS=Arabidopsis thaliana GN=MSH7
PE=1 SV=1
Length = 1109
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 173/524 (33%), Positives = 258/524 (49%), Gaps = 64/524 (12%)
Query: 260 VKIFGSDKLSNGFDNPVMGDVSERFSAREADKFHFLGPDR-RDAKRRRPGDVYYDPRTLY 318
V + S+K +PV G+ E E KF +L R RDA RRRP D YD +TL+
Sbjct: 202 VPVLDSNKRLKMLQDPVCGEKKE---VNEGTKFEWLESSRIRDANRRRPDDPLYDRKTLH 258
Query: 319 LPPDFLRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQP 378
+PPD + +S QKQ+W KS++MD V+FFK+GKFYEL+E+DA +G KELD +
Sbjct: 259 IPPDVFKKMSASQKQYWSVKSEYMDIVLFFKVGKFYELYELDAELGHKELDWKMTMSGVG 318
Query: 379 HC---GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVV 435
C G E V+KL +GY+V +EQ ET +Q + R + ++ R++ V+
Sbjct: 319 KCRQVGISESGIDEAVQKLLARGYKVGRIEQLETSDQAKAR-----GANTIIPRKLVQVL 373
Query: 436 TKGTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDL 495
T T +EG + PDA +L+A+ E ST +G VD A R +G + DD
Sbjct: 374 TPSTASEGNI---GPDAVHLLAIKEIKMELQKCST--VYGFAFVDCAALRFWVGSISDDA 428
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHT-RNPLVNDLVPLSEFWDAETTVLE 554
C+ L LL ++ P E++ + LS E ++A+ ++T L P+ + +T
Sbjct: 429 SCAALGALLMQVSPKEVLYDSKGLSREAQKALRKYTLTGSTAVQLAPVPQVM-GDTDAAG 487
Query: 555 IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFY 614
++NI I + K S N +G L+E LSALG + +
Sbjct: 488 VRNI---IESNGYFKGSSESWNCAVDG---------LNEC-------DVALSALGELINH 528
Query: 615 LKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMV------LDAPALENLEVFENSRSGDS 668
L + L++ L GD+ PY V +D + NLE+F NS G
Sbjct: 529 LSRLKLEDVL------------KHGDIF--PYQVYRGCLRIDGQTMVNLEIFNNSCDGGP 574
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALS 728
SGTLY L++CV+ GKRLLR W+ PL + I +R D V ++ + + L
Sbjct: 575 SGTLYKYLDNCVSPTGKRLLRNWICHPLKDVESINKRLDVVEEFTANSESMQIT-GQYLH 633
Query: 729 RLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISAL 772
+LPD+ERLL R+ +S S+ VL KK L++ + A
Sbjct: 634 KLPDLERLLGRIKSSVR-----SSASVLPALLGKKVLKQRVKAF 672
>sp|Q4P6I8|MSH3_USTMA DNA mismatch repair protein MSH3 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=MSH3 PE=3 SV=1
Length = 1154
Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 171/676 (25%), Positives = 288/676 (42%), Gaps = 81/676 (11%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ E K++H ++ ++G + + DA + +KEL + C FPERN
Sbjct: 238 EKQILELKAEHPGVLLIIEVGYKLKFYGEDARIASKELSIM--------C-FPERNLLTA 288
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT- 439
++V++L + G++V VV Q ET L+ K + V R++ A+ T T
Sbjct: 289 MIPVHRLHIHVKRLIQAGHKVGVVRQIETRA---LKAASKNAYTPFV-RKLTALYTASTW 344
Query: 440 ---LTEGELLSANPDASY------LMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
L+ + L+AN +Y LMA+ E ++ +Q+ GI V+V T + Q
Sbjct: 345 VDDLSSLDDLAANMGDAYTNQPKSLMAIVEQSERGNAQADRVSIGIVSVEVNTGHLTYDQ 404
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPL-----VNDLVPLSEF 545
D S L ++ L P E++ P + P TE+ I N + L + ++
Sbjct: 405 FSDGHARSELETRIAHLAPAEVLIPPQLTKP-TEKVISYLLGNGADGGVRIERLAAMPDY 463
Query: 546 WDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVL 605
A +V Y ES + +E D + + L D S L
Sbjct: 464 NQAFQSV---TRFYRDRGLESPEVPEVPEVPGSSEADTTR----LATTLADGADKRSSPL 516
Query: 606 SALGGTLFYLKKSFLDETLLRFAKFEL----LPCSGFGDMAKKPYMVLDAPALENLEVFE 661
+L +L L L + + F+L + F + + M+L++ L NLE+F
Sbjct: 517 ISLIVSLPQLSLIALAQIIQHLQAFQLESICTLSTNFRSFSSRTTMLLNSNTLANLEIFR 576
Query: 662 NSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL 721
+ G+L L+ C +A G+RLLR W++RPL + ++ER DAV LR
Sbjct: 577 TANEQTERGSLIWLLDKCKSAMGRRLLRKWVSRPLTDIDKLQERLDAVEALRDGKSYVLR 636
Query: 722 EFRKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQA 781
L LPD+ER LAR+ Y A +L + +L+ + +
Sbjct: 637 RLDSVLHGLPDLERGLARM---------------TYGRATPTELATVLLSLN--RVTQEF 679
Query: 782 CSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMD 841
+ A + S H+L+ G + + L + ANN + +D D
Sbjct: 680 KADEAATWKTQSSLIDTHLLSLASGKQVVQTYLNQI--SIKEARANNKADLY----LDAD 733
Query: 842 YDSACKKVKE----IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRD 897
A + K+ I+ L +HL+E RKLL S+ YV++ YL+EV + VP +
Sbjct: 734 VFPAIQASKDNMAIIDGELREHLREIRKLLHRPSLDYVSVAGVDYLVEVRVADAKKVPVE 793
Query: 898 YELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCE-HHNKWRQMVA 956
+ S+ K R+ TP + +L Q + ++A + R + + C+ + R +VA
Sbjct: 794 WLRVSATKSMVRFHTPEVMRLSKIRDQHKETLDAAAQEAFARFVRELCKSEYVVLRNVVA 853
Query: 957 ATAGLTLILLDGSLLH 972
+ A L ++L SL H
Sbjct: 854 SLAVLDVLL---SLAH 866
>sp|P20585|MSH3_HUMAN DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4
Length = 1137
Score = 144 bits (364), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 149/652 (22%), Positives = 283/652 (43%), Gaps = 70/652 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ E K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 235 QYIEMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 294
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL------ 445
+L KGY+V VV+QTET + ++ + R++ A+ TK TL ++
Sbjct: 295 RRLVAKGYKVGVVKQTETAA----LKAIGDNRSSLFSRKLTALYTKSTLIGEDVNPLIKL 350
Query: 446 --------LSANPDASYLMALTESNQSPASQSTDRCF-GICVVDVATSRIILGQVMDDLD 496
+ + SYL+ ++E+ ++ + F GI V AT ++ D
Sbjct: 351 DDAVNVDEIMTDTSTSYLLCISENKENVRDKKKGNIFIGIVGVQPATGEVVFDSFQDSAS 410
Query: 497 CSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIK 556
S L +S L+PVE++ P+ LS +TE I R T + +D + + + E
Sbjct: 411 RSELETRMSSLQPVELLLPS-ALSEQTEALIHRATSVSVQDDRIRVERM---DNIYFEYS 466
Query: 557 NIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK 616
+ + +T E K ++ SQ I+S +++ V+ +L + YLK
Sbjct: 467 HAFQAVT-EFYAKDTVDIKGSQ-----------IISGIVNLEKP---VICSLAAIIKYLK 511
Query: 617 KSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQL 676
+ L++ L + F+ L +K +M ++ L NLE+ +N + G+L L
Sbjct: 512 EFNLEKMLSKPENFKQLS-------SKMEFMTINGTTLRNLEILQNQTDMKTKGSLLWVL 564
Query: 677 NHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERL 736
+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 565 DHTKTSFGRRKLKKWVTQPLLKLREINARLDAVSEVLHSESSVFGQIENHLRKLPDIERG 624
Query: 737 LARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQ 796
L ++ ++ + ++ + L+ + QA + A+ + +S
Sbjct: 625 LCSIY---------------HKKCSTQEFFLIVKTLYHLKSEFQAI--IPAVNSHIQSDL 667
Query: 797 LHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASL 856
L ++ +P ++S ++H+ + A + + D+ K+ EI+ +
Sbjct: 668 LRTVILE---IPELLSPVEHYLKILNEQAAKVGDKTELFKDLS-DFPLIKKRKDEIQGVI 723
Query: 857 TK---HLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ HL+E RK+L + S YVT+ +++E+ S +P D+ S K R+ +P
Sbjct: 724 DEIRMHLQEIRKILKNPSAQYVTVSGQEFMIEIKNSAVSCIPTDWVKVGSTKAVSRFHSP 783
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
I + L+Q + + + +F EH++ + V A + I
Sbjct: 784 FIVENYRHLNQLREQLVLDCSAEWLDFLEKFSEHYHSLCKAVHHLATVDCIF 835
>sp|A4J5Q6|MUTS_DESRM DNA mismatch repair protein MutS OS=Desulfotomaculum reducens
(strain MI-1) GN=mutS PE=3 SV=1
Length = 868
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 165/610 (27%), Positives = 265/610 (43%), Gaps = 119/610 (19%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KGE---QPHC 380
L+ +Q+ + K +H + ++FF++G FYE+F DA + ++EL++ GE P C
Sbjct: 3 LTPMMQQYLDIKKQHPNTILFFRLGDFYEMFFEDAKLASQELEITLTGRDAGEPERVPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + KL KGY+V + EQ E P + KG +VKRE+ V+T GTL
Sbjct: 63 GVPFHAADSYISKLIEKGYKVAICEQVEDP------KVTKG----IVKREVIRVITPGTL 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
+G +LS D +YL+A++++ S++ C G+ V D++T + ++ L
Sbjct: 113 MDGSMLS-EKDNNYLVAISQT-------SSNNC-GMAVADLSTGLFQVTEMEGHWSLESL 163
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+ L P E+ +L+P+ + +H + + +P + F TT+ E + + +
Sbjct: 164 LDEILRLTPREV-----LLTPDLK----KHEKTVQAFNFLPSTVF----TTLEETQQVSD 210
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
I E LN ++ + C+ A G L YL +
Sbjct: 211 YI--ELLNNQFGQKVSAVYKDRPAVCM-------------------AAGILLQYLINT-- 247
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
K +L + + + YM+LD A NLE+ ++ R GD GTL L+
Sbjct: 248 -------QKRQLNHITEITAYSPRAYMMLDGIARRNLEISKSLRDGDKRGTLLWVLDATK 300
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL-EFRKALSRLPDMERLLAR 739
TA G R+L+ WL +PL ++ I+ER DAV L VN E AL ++ D+ERL AR
Sbjct: 301 TAMGGRMLKNWLEQPLIDTLKIQERLDAVEEL--VNSILLREEISGALKQIYDLERLAAR 358
Query: 740 LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTESRQLH 798
A ANGR+ + AL G E + +L A+ S +L
Sbjct: 359 A-AYGSANGRD------------------MIALRGSLEKLPFIHDALAAV----SSTRLK 395
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGV-----DMDYD---SACKKVK 850
I T + L + D A N + GG+ D + D +A + K
Sbjct: 396 RIYTE-------FNTLSDLRKVLDLALAENPPVSLRDGGLIKDGFDQEVDQLRNAARDGK 448
Query: 851 EIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGF 907
A L KE +T I + +G + Y LEV + VP Y+ R +
Sbjct: 449 TWLAGLEAREKE------NTGIKNLKVGFNKVFGYYLEVTRANLSMVPEYYQRRQTLANA 502
Query: 908 FRYWTPNIKK 917
R+ TP +K+
Sbjct: 503 ERFITPELKE 512
>sp|Q12VC9|MUTS_METBU DNA mismatch repair protein MutS OS=Methanococcoides burtonii
(strain DSM 6242) GN=mutS PE=3 SV=1
Length = 887
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 163/647 (25%), Positives = 273/647 (42%), Gaps = 102/647 (15%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ-PH 379
L+ KQ+++ K +H D +IFF+MG FYE F DA + AKEL++ ++GE+ P
Sbjct: 4 LTPAMKQYYDAKKQHSDALIFFRMGDFYESFGEDAKIIAKELEITLTTRGKDIEGEKMPL 63
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
G P + +L +KGY+V + EQ E P +K KG ++KR + VVT GT
Sbjct: 64 AGIPYHALDNYLPRLIKKGYKVAICEQLEDP------KKAKG----IIKRGVVRVVTPGT 113
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
+ + + +P +YLM+++ D +G+ +DV+T + Q D
Sbjct: 114 AIDTSMFT-DPSNNYLMSIS---------GGDGDYGVSFLDVSTGEFLTTQFADKSPYDR 163
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ + +RP E I M S E L+ N LV E +D +++ ++ +
Sbjct: 164 IASEAARMRPSECIISRTMFSDERLVERLKEL-NVLVQGFK--DEAFDVDSSRKLLERHF 220
Query: 560 NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSF 619
N S EG G LP +T +G+ + AL
Sbjct: 221 NV---------------STLEGMGCAGLP------YATSSAGAALDYAL----------- 248
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
T +R EL S + +M+LD+ L NLE+ +N R + ++ L+
Sbjct: 249 --TTQMR----ELGHVSELSTYSDSEFMMLDSITLRNLEIVKNVRGEGNDTSILKVLDDT 302
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
T G RLL+ WL +PL N I R DA+ L + + R LS + D+ERL+ R
Sbjct: 303 NTPMGGRLLQKWLLKPLINVDSIDHRLDALECLAN-DTMLRFDVRSHLSFVKDIERLIGR 361
Query: 740 -LFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLH 798
++ +S A + K L + Q+ E + GCE++ L
Sbjct: 362 VVYGNSNARDLIALKRSL---GSVPQIVESMGDDPGCEMLINIRDGL------------- 405
Query: 799 HILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIEASLT 857
G + +I+K DA + + GG + Y+ ++K +
Sbjct: 406 ------LGFEQLENIVKLIDDAI----VDEPPVSVREGGMIRSGYNEKLDELKGMSTGGK 455
Query: 858 KHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTP 913
+ Q+K T I + +G + Y +E+ +S +P DY + + + R++TP
Sbjct: 456 TWIASFQQKERDRTGIKSLKVGYNRVFGYYIEITKSNIAQIPDDYIRKQTMRNAERFYTP 515
Query: 914 NIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAG 960
+K+ + A+ EK +AL++ L I H Q +A G
Sbjct: 516 ELKEWEDVILSAD-EKITALENELFTEITSRIASHASDLQRIAVLIG 561
>sp|Q0UXL8|MSH3_PHANO DNA mismatch repair protein MSH3 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=MSH3 PE=3 SV=3
Length = 1119
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 157/658 (23%), Positives = 267/658 (40%), Gaps = 69/658 (10%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ + K KHMD VI ++G ++ F DA +KEL + + G E P
Sbjct: 224 QYLDIKRKHMDTVIVMEVGYKFKFFGEDARTASKELGIVCIPGKFRYDEHPSEAHYDRFA 283
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
FP ++V++L + ++V VV Q ET + +++ R++ + TKG
Sbjct: 284 SASFPVHRLQVHVKRLVKANHKVGVVRQLETAAL----KAAGNNRNTPFVRKLTNLYTKG 339
Query: 439 TLT---EG-ELLSANPDAS-YLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMD 493
T EG E +A A+ YL+ +TE+N G+ V AT II D
Sbjct: 340 TYVDDIEGLETPTAGAQATGYLLCVTETNAKGWGTDEKVQVGLVAVQPATGDIIYDDFED 399
Query: 494 DLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL 553
S + L + P E + + LS T++ ++ H N S E
Sbjct: 400 GFMRSEIETRLLHIAPAEFLIVGD-LSKATDK-LIHHLSASKTNVFGDRSRVERVEKPKT 457
Query: 554 EIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLF 613
Y+ I+ +K S+ +G IL ++ + + LSA+ +
Sbjct: 458 MAAQAYSHISNFYADKMKSSQEGGSEQG-------AILDKVHQLSEHVTICLSAM---IT 507
Query: 614 YLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLY 673
YL L E + K+ F + + YM+L+ L +LE+++N S G+L+
Sbjct: 508 YLSDYAL-EHVFDLTKY-------FQPFSARSYMLLNGNTLSSLEIYQNQTDYTSKGSLF 559
Query: 674 AQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL--SRLP 731
++ T FG+RLLR W+ RPL + + ER AV L+ A++ K L
Sbjct: 560 WTMDRTKTRFGQRLLRKWVGRPLIDKERLEERIAAVEELKEGEHTIAVDKVKFLLGKIKT 619
Query: 732 DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAIL 789
D+E++L R++ + + + +D A + L G L+ +A S++ I
Sbjct: 620 DLEKVLIRIYYKKCSRPELLAALQILQDIASQYLSAKTPEQSGFSSILLSEAVSNVPKIY 679
Query: 790 ENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKV 849
E+ S L I + D + + D + +
Sbjct: 680 EDVNS-----------FLEKINAKAAKDDDKYGFFREEFEAE---------DINDLKLSI 719
Query: 850 KEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESL--RGSVPRDYELRSSKKGF 907
+E L H K+ LG T + YVT+ YL+EV VP ++ S+ K
Sbjct: 720 ASVEDDLNTHRKDAAAKLGKTKVDYVTVAGIEYLIEVKRKSVEEKKVPASWQQISATKTT 779
Query: 908 FRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
R+ TP +K++L E Q + +A + +RL+ + R V++ A L +L
Sbjct: 780 LRFHTPEVKRMLQERDQYKESLAAACDTAFKRLLDDIAAKYQSLRDCVSSLATLDALL 837
>sp|Q8RA71|MUTS_THETN DNA mismatch repair protein MutS OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=mutS PE=3 SV=1
Length = 869
Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 155/599 (25%), Positives = 257/599 (42%), Gaps = 107/599 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHCGFPER 385
+Q+ + K K+ D ++FF++G FYE+F DA + AKEL++ + P G P
Sbjct: 11 EQYLKIKEKYKDAILFFRLGDFYEMFYEDAEIAAKELEIALTGRDAGTEERAPMAGVPYH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
++KL +KGY+V + EQ E P K KG +VKR++ + T GT+ E
Sbjct: 71 AADFYIDKLVKKGYKVAICEQLEDPS------KAKG----LVKRDVVRIYTPGTIINPES 120
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
+ + +YL+++ + +GIC VDV T + ++ + + + ++
Sbjct: 121 MDEKSN-NYLVSVYREKDN---------YGICAVDVTTGELYATEIKNCKNGKRIYDEIA 170
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAE 565
+ P EII L + ++ N VN PL+ ++A + ++E
Sbjct: 171 KYSPSEIISNEEFLKNNKYIKVFKNN-NCAVNAYKPLN--YEASSELIE----------- 216
Query: 566 SLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLL 625
+ D V + E V+ +LG L YLK+ L +T L
Sbjct: 217 --KQFDKKVEELELEDKKF-------------------VIHSLGALLSYLKE--LQKTSL 253
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
+ + + + D YM LD+ A+ NLE+ E++R+ G+L L+ VT G
Sbjct: 254 K----HINKLTLYQD---NSYMGLDSNAIRNLEILESNRNKSKKGSLLGVLDRTVTPMGG 306
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ WL PL + I +R DAV L N +E ++ L+++ D+ERL ++
Sbjct: 307 RLLKKWLEEPLIDKDEIEKRLDAVEELFN-NYRERIELKELLNKVYDLERLASK------ 359
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGK 805
++Y+ K +FIS +L Q + IL SR L I
Sbjct: 360 ---------IVYQSVTPK---DFIS----IKLSLQNLPKIKNILSKFSSRLLKEIYEKLD 403
Query: 806 GLPAIVSIL-KHFKDAFDWVEANNSGRIIPHGGVDM--DYDSACKKVKEIEASLTKHLKE 862
L + ++ K KD D G II G +M A + K A+L +E
Sbjct: 404 VLQDVYELIDKSIKD--DPSNQLKEGNIIKDGYNEMVDKLRKASTEGKNWIANLEADERE 461
Query: 863 QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKL 918
+ T I + IG + Y +EV +S VP Y + + RY TP +K++
Sbjct: 462 K------TGIKNLRIGYNKVFGYYIEVTKSNIPQVPDRYIRKQTLANAERYVTPELKEI 514
>sp|P0CO92|MSH3_CRYNJ DNA mismatch repair protein MSH3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MSH3 PE=3 SV=1
Length = 1191
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 164/658 (24%), Positives = 270/658 (41%), Gaps = 113/658 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ+ E K ++ D ++ ++G Y+ DA ++EL + FP RNF
Sbjct: 243 EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPNRNFFTA 293
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
++V+KL GY+V V+ QTET +K +++ R++ + T T
Sbjct: 294 SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFARKLTHLFTAATY 349
Query: 441 TEGELL-------------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
E L +A P + L+A+ E AS + +CVV
Sbjct: 350 VEDPSLSSSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVP- 408
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL-------RHTRNP 534
T I + D + L L+ L P E++ P LS TE+ + RN
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLSKATEKVLTYFAGEPKHRGRNA 468
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYN-RITAESLNKADSN-VANSQAEGDGLTCLPGILS 592
+ + + +DA L N Y+ + +++K D N + EG+ L LS
Sbjct: 469 VRIERIDNIPEYDAAFDFL--TNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLS 526
Query: 593 E-----------LISTGDSGS-----------QVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ +++G S S QV+ ++ + Y+K+ L+
Sbjct: 527 QDGADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKH---- 582
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
S F A + +M+L + L NLE+++N G G+L L+HC T GKRLLR
Sbjct: 583 ----TSSFVRFANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLRE 638
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RPL + ++ R DA+ + N + R L +PD+ R L R
Sbjct: 639 WVGRPLLDVAALKARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR----------- 687
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
V Y A +L + L L + ++G + S L++I LP I
Sbjct: 688 ----VQYGKATPNELATLLITL--VRLASEFKPNMGNVF---RSCLLNNI---PNTLPTI 735
Query: 811 VSILKHFKDAFDWVEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
+ + F +A + +A N+ + P D+ C V E+E L +HL E RK+
Sbjct: 736 LDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKI 793
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
L ++ Y+T+ YL+EVP VP + S+ + RY TP I + E +Q
Sbjct: 794 LKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKERTQ 851
>sp|P0CO93|MSH3_CRYNB DNA mismatch repair protein MSH3 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MSH3 PE=3 SV=1
Length = 1191
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 163/658 (24%), Positives = 270/658 (41%), Gaps = 113/658 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPERNF--- 387
+KQ+ E K ++ D ++ ++G Y+ DA ++EL + FP RNF
Sbjct: 243 EKQFMEIKEQNRDVLLLMEVGYKYKFHGEDAKTASRELGI---------VAFPNRNFFTA 293
Query: 388 -------SMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
++V+KL GY+V V+ QTET +K +++ R++ + T T
Sbjct: 294 SIPTHRLHIHVKKLLSLGYKVGVITQTETAAL----KKIGDNRNAPFARKLTHLFTAATY 349
Query: 441 TEGELL-------------------SANPDASYLMALTESNQSPASQSTDRCFGICVVDV 481
E L +A P + L+A+ E AS + +CVV
Sbjct: 350 VEDPSLSSSSSSSSSVRFDDPVVPGTAPPPTNALVAIVEQPVDRASDDRVKVGLVCVVP- 408
Query: 482 ATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAIL-------RHTRNP 534
T I + D + L L+ L P E++ P L+ TE+ + RN
Sbjct: 409 GTGDITWDEFDDSQIRTELETRLAHLSPAELLLPKQRLTKATEKVLTYFAGEPKHRGRNA 468
Query: 535 LVNDLVPLSEFWDAETTVLEIKNIYN-RITAESLNKADSN-VANSQAEGDGLTCLPGILS 592
+ + + +DA L N Y+ + +++K D N + EG+ L LS
Sbjct: 469 VRIERIDNIPEYDAAFDFL--TNFYHCKEHKATVSKGDVNDERHLMTEGNKQWSLQPKLS 526
Query: 593 E-----------LISTGDSGS-----------QVLSALGGTLFYLKKSFLDETLLRFAKF 630
+ +++G S S QV+ ++ + Y+K+ L+
Sbjct: 527 QDGADISLDEEIYLASGVSSSKAILTLVDFPKQVVISMAVAIRYMKRFGLENAFKH---- 582
Query: 631 ELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRT 690
S F A + +M+L + L NLE+++N G G+L L+HC T GKRLLR
Sbjct: 583 ----TSSFVRFANRSHMLLSSNTLANLEIYQNQTDGGLYGSLIWLLDHCKTRMGKRLLRE 638
Query: 691 WLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSEANGRN 750
W+ RPL + ++ R DA+ + N + R L +PD+ R L R
Sbjct: 639 WVGRPLLDVAALKARADAIEEIMENNSYHMEKLRSLLINMPDLVRGLTR----------- 687
Query: 751 SNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAI 810
V Y A +L + L L + ++G + S L++I LP I
Sbjct: 688 ----VQYGKATPNELATLLITL--VRLASEFKPNMGNVF---RSCLLNNI---PNTLPTI 735
Query: 811 VSILKHFKDAFDWVEA--NNSGRII--PHGGVDMDYDSACKKVKEIEASLTKHLKEQRKL 866
+ + F +A + +A N+ + P D+ C V E+E L +HL E RK+
Sbjct: 736 LDTSQRFLNALNLKQARENDVANLWADPDRFPDIQDVKDCISVCEME--LNEHLMELRKI 793
Query: 867 LGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQ 924
L ++ Y+T+ YL+EVP VP + S+ + RY TP I + E +Q
Sbjct: 794 LKKPTLRYITVSGIEYLVEVPIRDTKIVPAQWMKISATRTVNRYHTPKILAITKERTQ 851
>sp|Q0BV38|MUTS_GRABC DNA mismatch repair protein MutS OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=mutS PE=3 SV=1
Length = 926
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 183/420 (43%), Gaps = 93/420 (22%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-----GEQ-PHCGFPERN 386
QW+ K++H D ++FF+MG FYELF DA A LD+Q K GE P CG P
Sbjct: 56 QWFVLKNQHPDALLFFRMGDFYELFFQDAENAAATLDIQLTKRGLHEGEPIPMCGVPVHA 115
Query: 387 FSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL 446
M + +L R+G+RV +VEQ E P+ R KG ++R++ +VT GT+TE LL
Sbjct: 116 AEMYLSRLIRRGWRVAIVEQMENPKN----RAGKGP----IRRDVVRLVTPGTITEETLL 167
Query: 447 SANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSE 506
A + L+A+T+S G +D++T + LD S L LL
Sbjct: 168 DAG-RPNLLLAITQSGNR---------LGAAWLDISTGLF----ETESLDESGLTALLGR 213
Query: 507 LRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDA----ETTVLEIKNIYNRI 562
L P EI+ P+++ H E WDA E V + N R+
Sbjct: 214 LDPAEILCPSSL-----------HL------------EMWDARRGPEQPVSDPANARARL 250
Query: 563 TAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDE 622
AE+ + + NV S + + + + Q L
Sbjct: 251 -AEAYDVSHINVFGSFTDAEAMAAM---------------QALD---------------- 278
Query: 623 TLLRFAKFELLPCSGFG-DMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVT 681
+R A+ LP G + + + +DA +LE+ + +R G + TL + + +T
Sbjct: 279 -YVRDAQMGALPRLGHPVPVGEAGRLAMDASTRASLEI-DRARDGGTERTLLSAVQRTLT 336
Query: 682 AFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP-FALEFRKALSRLPDMERLLARL 740
G R+L WL PL + +I RQD L + QP ++ R+ L PDM R L R+
Sbjct: 337 PAGGRMLAAWLGAPLTDRTVITARQDGWGWL--LEQPTLSMRLRETLRGCPDMARALGRI 394
>sp|P13705|MSH3_MOUSE DNA mismatch repair protein Msh3 OS=Mus musculus GN=Msh3 PE=2 SV=3
Length = 1091
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 152/654 (23%), Positives = 273/654 (41%), Gaps = 77/654 (11%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQ-YMKGEQPHCGFPERNFSMNV 391
Q+ + K +H D V+ + G Y F DA + A+EL++ ++ P ++V
Sbjct: 193 QYLDMKQQHKDAVLCVECGYKYRFFGEDAEIAARELNIYCHLDHNFMTASIPTHRLFVHV 252
Query: 392 EKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELL----- 446
+L KGY+V VV+QTET + +K V R++ A+ TK TL GE +
Sbjct: 253 RRLVAKGYKVGVVKQTETAALKAI----GDNKSSVFSRKLTALYTKSTLI-GEDVNPLIR 307
Query: 447 ---SANPD-------ASYLMALTESNQSPASQST-DRCFGICVVDVATSRIILGQVMDDL 495
S N D +YL+ + E ++ + + G+ V AT ++ D
Sbjct: 308 LDDSVNIDEVMTDTSTNYLLCIYEEKENIKDKKKGNLSVGVVGVQPATGEVVFDCFQDSA 367
Query: 496 DCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEI 555
L +S L+PVE++ P+++ P TE I R T + +D + + T E
Sbjct: 368 SRLELETRISSLQPVELLLPSDLSEP-TEMLIQRATNVSVRDDRIRVERM---NNTYFEY 423
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+ + +T A + G L G++ + V+ AL + YL
Sbjct: 424 SHAFQTVT--------EFYAREIVDSQGSQSLSGVI-------NLEKPVICALAAVIRYL 468
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K+ L++ L + F+ L SG +M ++ L NLE+ +N + G+L
Sbjct: 469 KEFNLEKMLSKPESFKQLS-SGM------EFMRINGTTLRNLEMVQNQTDMKTKGSLLWV 521
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+H T+FG+R L+ W+ +PL I R DAV+ + + L +LPD+ER
Sbjct: 522 LDHTKTSFGRRKLKNWVTQPLLKLREINARLDAVSDVLHSESSVFEQIENLLRKLPDVER 581
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHG-CELMDQACSSLGAILENTES 794
L ++ K QEF + C+L + + + A+ + +S
Sbjct: 582 GLCSIYHK------------------KCSTQEFFLIVKSLCQLKSELQALMPAVNSHVQS 623
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKK---VKE 851
L ++ ++S ++H+ + A + + D+ K+ ++E
Sbjct: 624 DLLRALIV------ELLSPVEHYLKVLNGPAAKVGDKTELFKDLS-DFPLIKKRKNEIQE 676
Query: 852 IEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYW 911
+ S+ L+E RK+L S+ YVT+ +++E+ S +P D+ S K R+
Sbjct: 677 VIHSIQMRLQEFRKILKLPSLQYVTVSGQEFMIEIKNSAVSCIPADWVKVGSTKAVSRFH 736
Query: 912 TPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLIL 965
P I + L+Q + + + F EH++ + V A + I
Sbjct: 737 PPFIVESYRRLNQLREQLVLDCNAEWLGFLENFGEHYHTLCKAVDHLATVDCIF 790
>sp|A3DDI3|MUTS_CLOTH DNA mismatch repair protein MutS OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=mutS PE=3 SV=1
Length = 870
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 149/631 (23%), Positives = 264/631 (41%), Gaps = 138/631 (21%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ +L+ +Q+ E K ++ D ++FF++G FYE+F DA V ++EL++ ++
Sbjct: 1 MASLTPMMQQYLEIKEQYKDCILFFRLGDFYEMFFSDAEVASRELEITLTGKDCGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + + KL KGY+V + EQ E P KG +VKR++ +VT
Sbjct: 61 PMCGVPFHSADSYIAKLISKGYKVAICEQIEDPAL------AKG----LVKRDVIRIVTP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GT+T+ +L + +YLM++ ++ +GI VD+ T + +
Sbjct: 111 GTVTDSAMLDEKKN-NYLMSIYKNKNY---------YGIACVDLTTGEFLSTHITFGNTF 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKN 557
+ L +++ P EI+ E + L+ + ++ L +F++ E ++ +++N
Sbjct: 161 NKLMDEIAKFSPSEIVVNGEFFHDENIKKTLKQRFDVYISGLE--DKFFEKEFSIQKVRN 218
Query: 558 IYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKK 617
+ E ++ ++A G L YL++
Sbjct: 219 YFKDYVIEE--------------------------------NAFDLYINASGALLEYLEQ 246
Query: 618 SFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLN 677
+ K L F + YM+LD NLE+ E R + G+L L+
Sbjct: 247 T---------QKVNLSHIQNFNVYRIEEYMILDMATRRNLELTETMREKNRKGSLLWVLD 297
Query: 678 HCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMER 735
+T+ G R LR W+ +PL N I++R DAV + + F + E R+ L + D+ER
Sbjct: 298 RTMTSMGGRTLRKWIEQPLINLHDIKDRLDAVNEFK---ERFMIRSEVRELLRAVYDIER 354
Query: 736 LLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESR 795
L+ ++ S AN R+ IS H S+G
Sbjct: 355 LMTKVILGS-ANCRD-----------------LISIKH----------SIG--------- 377
Query: 796 QLHHILTPGKGLPAIVSILKH-----FKDAFDWVE---------ANNSGRIIPHGGVDMD 841
Q+ +I + L A +++L + D ++ ++ A G II G + +
Sbjct: 378 QVPYIKELLRDLKADLNVLSYNELDTLTDVYEIIDKAIVDDPPVAVKEGGIIKE-GFNEE 436
Query: 842 YD---SACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVP 895
D SA K K+ A L +E+ T I + +G + Y +EV +S VP
Sbjct: 437 VDRLRSASKDGKKWIAHLESKERER------TGIKNLKVGFNKVFGYYIEVTKSYYSQVP 490
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAE 926
DY + + RY TP +K++ + AE
Sbjct: 491 DDYIRKQTLANCERYITPELKEIENTVLGAE 521
>sp|O65607|MSH3_ARATH DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3
PE=1 SV=2
Length = 1081
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 157/692 (22%), Positives = 282/692 (40%), Gaps = 97/692 (14%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL-QYMKGEQPHCGFP 383
R + ++Q E KSK+ D V+ ++G Y F DA + A+ L + +M P
Sbjct: 102 RKYTPLEQQVVELKSKYPDVVLMVEVGYRYRFFGEDAEIAARVLGIYAHMDHNFMTASVP 161
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ +V +L GY++ VV+QTET + ++ R + A+ TK TL
Sbjct: 162 TFRLNFHVRRLVNAGYKIGVVKQTETAAI----KSHGANRTGPFFRGLSALYTKATLEAA 217
Query: 444 ELLSAN--------PDASYLMAL------TESNQSPASQSTDRCFGICVVDVATSRIILG 489
E +S +++L+ + +E+ S D G+ V+++T ++
Sbjct: 218 EDISGGCGGEEGFGSQSNFLVCVVDERVKSETLGCGIEMSFDVRVGVVGVEISTGEVVYE 277
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF--WD 547
+ D+ S L ++ L P E++ LS +TE+ ++ H P N V + +
Sbjct: 278 EFNDNFMRSGLEAVILSLSPAELLL-GQPLSQQTEKFLVAHA-GPTSNVRVERASLDCFS 335
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
V E+ ++ +I+A +L D +A G++CL + + + + A
Sbjct: 336 NGNAVDEVISLCEKISAGNLE--DDKEMKLEAAEKGMSCL-----TVHTIMNMPHLTVQA 388
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
L T +LK+ + L + A F ++ M L A L+ LEV +N+ G
Sbjct: 389 LALTFCHLKQFGFERILYQGASFR--------SLSSNTEMTLSANTLQQLEVVKNNSDGS 440
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGL--------------- 712
SG+L+ +NH +T +G RLLR W+ PL + LI R DAV+ +
Sbjct: 441 ESGSLFHNMNHTLTVYGSRLLRHWVTHPLCDRNLISARLDAVSEISACMGSHSSSQLSSE 500
Query: 713 -------RGVNQP-FALEFRK---ALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAA 761
R + P F L A+SR D++R + R+F +
Sbjct: 501 LVEEGSERAIVSPEFYLVLSSVLTAMSRSSDIQRGITRIFHRT----------------- 543
Query: 762 KKQLQEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKH---FK 818
+ EFI+ + L + LG I +++E R + L ++S++
Sbjct: 544 -AKATEFIAVMEAILLAGKQIQRLG-IKQDSEMRSMQSATVRSTLLRKLISVISSPVVVD 601
Query: 819 DAFDWVEANNSGRIIPHGGVDMDYDS---------ACKKVKEIEASLTKHLKEQRKLLGD 869
+A + A N + +D+ S A + V I L + RK L
Sbjct: 602 NAGKLLSALNKEAAVRGDLLDILITSSDQFPELAEARQAVLVIREKLDSSIASFRKKLAI 661
Query: 870 TSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEK 929
++ ++ + +L+E+P + VP ++ +S K RY P I L EL+ A
Sbjct: 662 RNLEFLQVSGITHLIELP--VDSKVPMNWVKVNSTKKTIRYHPPEIVAGLDELALATEHL 719
Query: 930 ESALKSILQRLIGQFCEHHNKWRQMVAATAGL 961
++ + F ++ ++ V A A L
Sbjct: 720 AIVNRASWDSFLKSFSRYYTDFKAAVQALAAL 751
>sp|A6RPB6|MSH3_BOTFB DNA mismatch repair protein msh3 OS=Botryotinia fuckeliana (strain
B05.10) GN=msh3 PE=3 SV=2
Length = 1133
Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 153/676 (22%), Positives = 264/676 (39%), Gaps = 102/676 (15%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQP---HCGF-- 382
Q + K KHMD ++ ++G ++ F DA AK L + + G E P H +
Sbjct: 216 QVIDIKRKHMDTLLIVEVGYKFKFFGEDARTAAKVLSIVCIPGKFRFDEHPSESHLNYFA 275
Query: 383 ----PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L GY++ +V QTET +K +++ R++ V TKG
Sbjct: 276 SASIPVHRLPVHAKRLVAAGYKIGIVRQTETAAL----KKAGDNRNAPFVRKLTNVYTKG 331
Query: 439 TL--------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQ 490
T T P YL+ +TE+ GI V AT +I
Sbjct: 332 TYIDDIDGLDTTDAPSGGAPATGYLLCITETKAKGWGTDEKVEVGILAVQPATGDVIYDN 391
Query: 491 VMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWDA 548
D L L + P E++ L+ T++ + L + + D + + +
Sbjct: 392 FEDGFMRGELETRLLHIAPCELLIVGE-LTKATDKLVQHLSGSSTNVFGDRIRVERVGKS 450
Query: 549 ETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSAL 608
+T E Y+R+ +K ++ +++ A L L +++ + + LSA+
Sbjct: 451 KTMAAES---YSRVAQFYADKLKAHQSSNNAREQEL------LEKVLKLTEPVTICLSAM 501
Query: 609 GGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDS 668
+ ++ + L E + K+ F + + +M+L+ L +LE++ N
Sbjct: 502 ---ITHMTEYGL-EHVFDLTKY-------FQSFSARSHMLLNGNTLTSLEIYTNQTDYTQ 550
Query: 669 SGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLR-GVNQPFALEFRKAL 727
G+L+ L+ T FG+RLLR W+ RPL + + ER AV L+ N P + L
Sbjct: 551 KGSLFWTLDKTQTKFGQRLLRKWVGRPLLDKQRLEERVAAVEELKDNANTPKVDKLNATL 610
Query: 728 SRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLG 786
+ D+ER L R++ Y + +L + +
Sbjct: 611 REVRSDLERSLLRIY---------------YGKCTRPELLTVLQTMQRI----------- 644
Query: 787 AILENTESRQLHHILTPGKG-------------LPAIVSILKHFKDAFDWVEANNSGR-- 831
+ + H+ TP LPAI I+ F D + A N +
Sbjct: 645 -------ANEFAHVKTPSDAGFESIALNEAVASLPAIGEIVISFLDKINAQAARNDDKYA 697
Query: 832 -IIPHGGVDMDYDSACKKVKEIEASLTKH-LKEQRKLLGDTSITYVTIGKDLYLLEVPES 889
+ H + D C + +E L H + KL T +TYVTI YL+EVP +
Sbjct: 698 FFLEHYETEAIGDHKC-GIGAVEQDLEAHRMVAATKLSKKTPVTYVTIAGIEYLIEVPNT 756
Query: 890 LRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHN 949
+VP + S K R+ TP + K L E Q + SA + + + H+
Sbjct: 757 DLKNVPASWAKISGTKKMSRFHTPEVIKFLRERDQHKESLSSACDAAFSTFLSEISTHYA 816
Query: 950 KWRQMVAATAGLTLIL 965
R ++ A L +L
Sbjct: 817 LIRDTISHLATLDCLL 832
>sp|B0BWY8|MUTS_RICRO DNA mismatch repair protein MutS OS=Rickettsia rickettsii (strain
Iowa) GN=mutS PE=3 SV=1
Length = 890
Score = 126 bits (316), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + D + GI G+ S + A+G L YL +
Sbjct: 224 FFAINKCKKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 265
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ GDS G+L + LNH VT
Sbjct: 266 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQ-GDSQGSLLSTLNHTVTKQ 322
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 323 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 380
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 381 NRSSGRD 387
>sp|A8GRI6|MUTS_RICRS DNA mismatch repair protein MutS OS=Rickettsia rickettsii (strain
Sheila Smith) GN=mutS PE=3 SV=1
Length = 886
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 135 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + D + GI G+ S + A+G L YL +
Sbjct: 220 FFAINKCKKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 261
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ GDS G+L + LNH VT
Sbjct: 262 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQ-GDSQGSLLSTLNHTVTKQ 318
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 319 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 376
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 377 NRSSGRD 383
>sp|B9EBI4|MUTS_MACCJ DNA mismatch repair protein MutS OS=Macrococcus caseolyticus
(strain JCSC5402) GN=mutS PE=3 SV=1
Length = 846
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 186/414 (44%), Gaps = 96/414 (23%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKGEQ----PHCGFPERNFS 388
Q+ + K ++ D ++FF++G FYE+F DA + AKEL++ + ++ P CG P +
Sbjct: 10 QYLQMKEQYKDCILFFRLGDFYEMFYEDAELTAKELEITLTRRDKKNNIPMCGVPHHSAK 69
Query: 389 MNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSA 448
+ +E+L KGY+V + EQ E P+Q+ KG +VKRE+ ++T GT+ + +++S
Sbjct: 70 VYIERLIEKGYKVAIAEQMEDPKQV------KG----MVKREVVKIITPGTVMD-DMISE 118
Query: 449 NPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELR 508
N +++Y+ AS + F + DV+T + + Q+ +D + LS +
Sbjct: 119 N-ESNYI----------ASIHHEEGFTLAYSDVSTGELKVTQLNED----EMLNELSSVN 163
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
P EII ++ L+N + ++ + ++
Sbjct: 164 PKEIITNIDL-------------NEVLINKI---------------------KMITDVIS 189
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
+ + N QA+G + P + L + + L+ + ++Y +
Sbjct: 190 RFEVNDTFKQADGVDQSLQPAVNLLLSYIQYTQMRALAHIDEAVYYEPVHY--------- 240
Query: 629 KFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
M LD A NLE+ E+ R + GTL + N C T G RL+
Sbjct: 241 ------------------MRLDMYAKRNLELTESIRHKNKKGTLLSIFNQCKTPMGNRLV 282
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDMERLLARL 740
+ W+ RPL N I ER + G+ N F L + R+AL+ + D+ERL R+
Sbjct: 283 KEWIERPLLNRQEIEERHN---GVELFNDNFILRHQLREALTHVYDIERLAGRV 333
>sp|Q2GJL7|MUTS_ANAPZ DNA mismatch repair protein MutS OS=Anaplasma phagocytophilum
(strain HZ) GN=mutS PE=3 SV=1
Length = 820
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 191/413 (46%), Gaps = 69/413 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK--GEQPHCGFPERNFSM 389
+Q+ K ++ + ++ +++G FYELF DA + +K L++ K + P CG P +
Sbjct: 12 RQYRALKEQYGECLLLYRLGDFYELFFEDAVIASKTLNIVLTKRGTDTPMCGVPYHSSES 71
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ +L + GY+V V EQ ET E+ K S +V+RE+ +VT GTL E LL A
Sbjct: 72 YIGRLVKSGYKVAVCEQIETAEE-----ARKRSVRALVRREVTRIVTPGTLVEDSLLDAK 126
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI-ILGQVMDDLDCSVLCCLLSELR 508
+ +YL ++ + +G+ ++++T + ++DLD + L
Sbjct: 127 EN-NYLACISNIGER---------YGVAWMELSTGLFHVRASKLEDLDSEI-----QRLG 171
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
P E++ + ++ +L+ R + + F+D++ + +Y
Sbjct: 172 PSELLISDKLKEQQSMELVLKRHRCAITSHN---ESFFDSKRAEKVLCGVY--------- 219
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFA 628
G+T + G+ GD +SA G L Y+ R
Sbjct: 220 --------------GVTTVQGL-------GDFEEVEVSACGSLLEYV----------RMT 248
Query: 629 KFELLPCSGFGDMA-KKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRL 687
+ LP + + ++++D PAL NLE+F +++SG+ G+L + ++H VTA G R+
Sbjct: 249 QRGSLPKLSYPKVRDSNSFVLIDGPALRNLELF-STQSGEKKGSLISTIDHTVTAMGSRM 307
Query: 688 LRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
L+ +LA P+ +I RQDAV N+ R ++ PD+ER+L R+
Sbjct: 308 LKRYLAFPVACHNVINGRQDAVEFFVS-NRSLCEVIRGVINGFPDIERILTRV 359
>sp|C3PN02|MUTS_RICAE DNA mismatch repair protein MutS OS=Rickettsia africae (strain
ESF-5) GN=mutS PE=3 SV=1
Length = 890
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 191/431 (44%), Gaps = 77/431 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEANYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L ++ Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNLRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL----KKSF 619
++NK + + + D + GI G+ S + A+G L YL K++
Sbjct: 224 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYLSLTQKQNI 272
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ R KF YM +D NLE+ NS+ G S G+L + LNH
Sbjct: 273 PHLPIPRIIKFH-------------SYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHT 318
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G RLL +L+ PL N I R + N + R+ L + D+ER L R
Sbjct: 319 VTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTR 377
Query: 740 LFASSEANGRN 750
+ + ++GR+
Sbjct: 378 I-TMNRSSGRD 387
>sp|Q92IL9|MUTS_RICCN DNA mismatch repair protein MutS OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=mutS PE=3 SV=1
Length = 890
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 190/431 (44%), Gaps = 77/431 (17%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 23 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 82
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 83 HALENYLTKLIEANYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 138
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 139 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 185
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 186 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 223
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL----KKSF 619
++NK + + + D + GI G+ S + A+G L YL K++
Sbjct: 224 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYLSLTQKQNI 272
Query: 620 LDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHC 679
+ R KF YM +D NLE+ NS+ G S G+L + LNH
Sbjct: 273 PHLPIPRIIKFH-------------SYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHT 318
Query: 680 VTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLAR 739
VT G RLL +L+ PL N I R + N + R+ L + D+ER L R
Sbjct: 319 VTKQGGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTR 377
Query: 740 LFASSEANGRN 750
+ + ++GR+
Sbjct: 378 I-TMNRSSGRD 387
>sp|A8F164|MUTS_RICM5 DNA mismatch repair protein MutS OS=Rickettsia massiliae (strain
Mtu5) GN=mutS PE=3 SV=1
Length = 891
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 190/427 (44%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 24 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 83
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 84 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 139
Query: 445 LLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L N+ AS +C VD++TS I++ V + + +
Sbjct: 140 LI-ASAEPNYLASLVIPKNKETAS--------LCYVDLSTSEIVVVNVPE----TEILNE 186
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 187 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 224
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + A+G L YL +
Sbjct: 225 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSVLEYL-------S 266
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G S G+L + LNH VT
Sbjct: 267 LTQKQNIPHLPIPRIINF--HSYMTIDFSTRRNLEIVTNSQGG-SQGSLLSTLNHTVTKQ 323
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N + R+ L + D+ER L R+
Sbjct: 324 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKKIRELLKKTSDIERCLTRI-TM 381
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 382 NRSSGRD 388
>sp|Q2HFD4|MSH3_CHAGB DNA mismatch repair protein MSH3 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=MSH3 PE=3 SV=1
Length = 1156
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 157/663 (23%), Positives = 267/663 (40%), Gaps = 73/663 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG----EQPH--- 379
L+ + Q+ + K KHMD V+ ++G + F DA + AKEL + + G ++PH
Sbjct: 228 LTPMEIQFLDIKRKHMDTVLVVEVGYKFRFFGEDARIAAKELSIVCIPGKFRYDEPHIDR 287
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P S++V++L G++V VV Q ET +K +++ R++ + T
Sbjct: 288 FASASIPVHRLSVHVKRLVAAGHKVGVVRQLETAAL----KKAGDNRNAPFVRKLTNIYT 343
Query: 437 KGTLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
KGT + GEL + YL+ LTES + G+ V AT II
Sbjct: 344 KGTYIDETGELDQPGEGAGASAGGYLLCLTESPVKGLGTDENVHIGVMAVQPATGDIIYD 403
Query: 490 QVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPLSEFWD 547
D + L + P E++ LS T + + L + + D +
Sbjct: 404 DFEDGFMRREIETRLLHISPCELLVVGE-LSKATNKLVQHLAGSSTNVFGDRSRVERVPK 462
Query: 548 AETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSA 607
++T E + + A + D A+ +L +++ +S + LSA
Sbjct: 463 SKTMAAEASSHVTQFYAGKVKGDDERSAS-------------LLDKVLKLPESVTVCLSA 509
Query: 608 LGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGD 667
+ + +L + L E + K+ F + +M+++ LE+LEV+ N+
Sbjct: 510 M---ITHLTEYGL-EHIFDLTKY-------FQSFTTRQHMLINGTTLESLEVYRNATDQS 558
Query: 668 SSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKAL 727
G+L L+ T G+RLLR W+ RPL + + ER AV L F ++ +
Sbjct: 559 EKGSLLWALDKTRTRPGRRLLRKWIGRPLLDRERLEERVTAVEELLEHQSNFKVDRLGGV 618
Query: 728 --SRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSL 785
S D+ER L R++ K E +S L + + S +
Sbjct: 619 LNSIKADLERSLIRIY------------------YGKCTRPELLSTLQTLQRISIEFSRV 660
Query: 786 GAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSA 845
+ + L I+ LP I +I+ + D + A + + D
Sbjct: 661 KTPEDTGFNSSL--IVEAIYALPGIGTIVSAYLDKINPEAARKDDKYTFFRDDEETEDIT 718
Query: 846 CKK--VKEIEASLTKHLKE-QRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRS 902
K + +EA L H K+ KL T +TYVT+ YL+EVP + VP + S
Sbjct: 719 NHKLGIAAVEADLDVHRKDAATKLSKKTPVTYVTVSGIEYLIEVPNTDLKHVPASWAKIS 778
Query: 903 SKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLT 962
K R+ TP + +L+ E Q + +A + L+ + R VA+ A L
Sbjct: 779 GTKKLSRFHTPEVMRLMNERDQHKEALAAACDNAFTDLLKSIASEYQPLRDAVASLATLD 838
Query: 963 LIL 965
+L
Sbjct: 839 CLL 841
>sp|Q895H2|MUTS_CLOTE DNA mismatch repair protein MutS OS=Clostridium tetani (strain
Massachusetts / E88) GN=mutS PE=3 SV=1
Length = 881
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 186/429 (43%), Gaps = 79/429 (18%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPHC 380
L+ +Q+ E K K D ++FF++G FYE+F DA +KEL+L + P C
Sbjct: 3 LTPMMQQYLEVKEKCKDCILFFRLGDFYEMFFEDAETASKELELVLTGRDCGLSKRAPMC 62
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + S + +L KGY++ + EQ E P KG +VKR+I +VT GT
Sbjct: 63 GIPYHSASNYINRLVSKGYKIAICEQLEDPSA------AKG----IVKRDIVKIVTPGTY 112
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
++ L+ + +Y+M+L ++S A +C D++T LD S++
Sbjct: 113 SDSNFLNETKN-NYIMSLYIEDKSVA---------MCFCDISTGDFF--ATSHSLDKSII 160
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
+S+ P E+ +L+ + ++ IL+ +N + L + + + +LE
Sbjct: 161 LDEISKFDPSEL-----LLNKDIDKNILKEIKNRFTISITNLEKDYFKDYNLLE------ 209
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
G S+ + + S VL G L
Sbjct: 210 ----------------------------GQFSDF--SKEEYSLVLIKCGNGLL------- 232
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ +L K L F + Y+ +D + NLE+ E R G+L L+ C
Sbjct: 233 -KYILETQKMSLGHIDCFKNYNIVDYLSMDINSRRNLEITETIRDKSRKGSLLWVLDKCS 291
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G RL+R W+ +PL N I +R +AV L +N + + AL + D++R++ ++
Sbjct: 292 TAMGARLIRNWVEQPLINKEKIDKRLNAVEELV-LNISLHEDLKDALKDIYDIQRIVGKI 350
Query: 741 FASSEANGR 749
+S N +
Sbjct: 351 -SSKNVNAK 358
>sp|Q2UT70|MSH3_ASPOR DNA mismatch repair protein msh3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=msh3 PE=3 SV=1
Length = 1111
Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 153/678 (22%), Positives = 279/678 (41%), Gaps = 86/678 (12%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH 379
R L+ +KQ + K KHMD V+ ++G + F DA AKEL++ + G E P
Sbjct: 196 RKLTPMEKQVIDIKRKHMDTVLVVEVGYKFRFFGEDARTAAKELNIVCIPGKFRFDEHPS 255
Query: 380 ---------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKRE 430
P ++V++L G++V VV Q ET + +++ R+
Sbjct: 256 EAHLDRFASASIPVHRLHVHVKRLVSAGHKVGVVRQMETAAL----KAAGDNRNAPFGRK 311
Query: 431 ICAVVTKGTLT------EGELLSANPDAS-----YLMALTESNQSPASQSTDRCFGICVV 479
+ + TKGT EG S + + Y++ +TE+N GI V
Sbjct: 312 LTNLYTKGTYIDDMEGLEGSTASMSATGTSMATGYMLCITETNTKGWGNDEKVLVGIVAV 371
Query: 480 DVATSRIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVN 537
AT I+ + D S + L L P E++ + LS TE+ + L +
Sbjct: 372 QPATGDIVYDEFEDGFMRSEIETRLLHLAPCEVLIVGD-LSKATEKLVQHLSGNKTNAFG 430
Query: 538 DLVPLSEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELIST 597
D + + A+T E + + AE + K + A + + L L ++++
Sbjct: 431 DEIRVERAPKAKTAAAESHSHVSSFYAERMKKVN---ATNDVQASSL------LQKVLNL 481
Query: 598 GDSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENL 657
+ + LS++ + ++ + L E + + K+ F + + +M+L+A L +L
Sbjct: 482 SEQATICLSSM---IKHMSEYGL-EHVFQLTKY-------FQHFSSRSHMLLNANTLNSL 530
Query: 658 EVFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQ 717
E++ N + G+L+ L+ T FG+R+LR W+ RPL N + ER DAV L+ + +
Sbjct: 531 EIYHNQTDHSTKGSLFWTLDRTQTRFGQRMLRKWVGRPLLNKLGLEERVDAVEELKNLER 590
Query: 718 PFALEFRKAL-SRL-PDMERLLARLFASS----EANGRNSNKVVLYEDAAKKQLQEFISA 771
+E K L R+ D+E+ L R++ E ++ ++ A +Q
Sbjct: 591 VALVEQMKCLLGRIKTDLEKSLIRVYYGKCTRPELLTLLQTLQMIAQEFAG--VQSPADT 648
Query: 772 LHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV-EANNSG 830
L+ +A +SL ILE+ + L I D +++ E+ +
Sbjct: 649 GFSSPLISKAVASLPTILEDVV-----------RFLDKINMHAAKNDDKYEFFRESEETD 697
Query: 831 RIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVPE-- 888
I H + +E L +H ++LG + YVT+ YL+ V
Sbjct: 698 EITEHK----------LGIGAVEHDLEEHRSTAGEILGKRKVDYVTVAGIEYLIAVENKS 747
Query: 889 -SLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEH 947
S++ VP + S K R+ TP + +LL + Q + + + +
Sbjct: 748 PSIK-KVPASWVKISGTKAVSRFHTPEVIRLLRQRDQHKEALAAGCDKAYATFLAEISAS 806
Query: 948 HNKWRQMVAATAGLTLIL 965
+ +R V + A L ++
Sbjct: 807 YQSFRDSVQSLATLDCLI 824
>sp|A8EZG1|MUTS_RICCK DNA mismatch repair protein MutS OS=Rickettsia canadensis (strain
McKiel) GN=mutS PE=3 SV=1
Length = 891
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 189/420 (45%), Gaps = 68/420 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCG 381
++ +Q+ + K H+D ++ F+MG FYE+F DA + +K L + K GE+ P CG
Sbjct: 21 TKMMQQYLDIKFAHLDCLLLFRMGDFYEMFYEDATIASKVLGIALTKRGKNGEEEIPMCG 80
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL ++ +++ + +Q ETPE+ K KG VV R++ ++T GT+
Sbjct: 81 IPYHALENYLTKLIKENHKIAICDQLETPEE----AKNKGGYKAVVSRDVTRIITPGTII 136
Query: 442 EGELLSANPDASYLMALT-ESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E + A+ + +YL +L N+ AS +C VD++TS I + V + + +
Sbjct: 137 EENFI-ASDEPNYLASLVIPQNKETAS--------LCYVDLSTSEIFVVNVPE----AEI 183
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+P EI+ N+ S S D NI+
Sbjct: 184 LNELARLKPREILLSENLRS----------------------SNLAD---------NIFK 212
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
++ + DS A ++ E L + ++ G+ S + +G L YL
Sbjct: 213 QLNFRITYQVDSFFAVNKCEKIILDFYK--MKDIKGIGEISSGQICTIGSILEYL----- 265
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ NS+ G S G++ + +NH V
Sbjct: 266 --SLTQKQNIPHLPIPRIINF--HSYMAIDVATRRNLEIVTNSQGG-SKGSVLSTINHTV 320
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL + I +R + + N + R+ L R+ D+ER L R+
Sbjct: 321 TKQGGRLLYNFLSSPLTDITKINQRLN-ITDFFYSNPAIVSKIREYLKRISDIERCLTRI 379
>sp|Q0AYB5|MUTS_SYNWW DNA mismatch repair protein MutS OS=Syntrophomonas wolfei subsp.
wolfei (strain Goettingen) GN=mutS PE=3 SV=1
Length = 859
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 183/419 (43%), Gaps = 69/419 (16%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCGFPER 385
+Q+ + K + D ++FF++G FYE+F DA + ++EL++ + P CG P
Sbjct: 9 QQYLQIKEEQQDAILFFRLGDFYEMFFEDARIASRELEIVLTARDGGAGSKIPMCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + +L +GY+V + EQ E P R+ KG +VKRE+ +VT GT+ E +L
Sbjct: 69 SVDNYLARLINRGYKVAICEQVEDP------REAKG----IVKREVTRIVTPGTIIEEQL 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
L ++N A + C GI +D++T L ++ + S + +
Sbjct: 119 LDQ----------AKNNFLAAVEEEPLCTGIAYIDISTGEFWLSEIAGENARSRVESEIL 168
Query: 506 ELRPVE-IIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITA 564
+ P E ++ + L+ E LR L WD LE A
Sbjct: 169 RISPAECLLAGSGSLTGSWEEEWLRQQNITLT--------VWDELPLSLE--------RA 212
Query: 565 ESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETL 624
ESL VA+ ++ G L + + ++++ +FL+ET
Sbjct: 213 ESLLLRQLQVASLESFG---------LKSYSAGIKAAARII------------AFLEET- 250
Query: 625 LRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFG 684
K L + ++ +D + NLE+ R G G+L + L+ TA G
Sbjct: 251 ---QKTSLQHIKSLRCYSSDNFLEMDFYSRRNLELTATLREGKREGSLLSILDESRTAMG 307
Query: 685 KRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
KRLLR W+ +PL +G I ER DAV L+ E LSR+ D+ERL ++ AS
Sbjct: 308 KRLLRRWIEQPLREAGEIEERLDAVDELKN-TLSLRTELTPLLSRINDLERLGGKIGAS 365
>sp|A8MFD4|MUTS_ALKOO DNA mismatch repair protein MutS OS=Alkaliphilus oremlandii (strain
OhILAs) GN=mutS PE=3 SV=2
Length = 880
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 197/435 (45%), Gaps = 80/435 (18%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+R L+ +Q+ E K+++ D ++FF++G FYELF DA ++EL++ ++ +
Sbjct: 1 MRKLTPMMQQYMEIKNQYKDALMFFRLGDFYELFFDDAETASRELEITLTARDCGLESKA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + ++KL KGY+V + EQ E P KG +VKR++ V+T
Sbjct: 61 PMCGVPYHAANGYIDKLVSKGYKVAICEQVEDPSV------AKG----IVKRDVVRVITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTL + LL + +YL++L S+ C G VD++T ++ +++
Sbjct: 111 GTLIDTNLLEDKKN-NYLVSLYMSSLG--------C-GFSYVDISTGELLSTEIVGTSIE 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAI-------LRHTRNPLVNDLVPLSEFWDAET 550
L +S++ P E+I E E I +R N ++ P + ++
Sbjct: 161 QNLIDEISKIEPNELIYFV-----EEEDKIGTNFIEGIRKKLNIHISKYDPWT--FEESY 213
Query: 551 TVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGG 610
+ +IKN +N +T ESL G L L ++A G
Sbjct: 214 AMNQIKNQFNILTVESL-------------GFSLNHLG----------------INATGA 244
Query: 611 TLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSG 670
+ YL KS TL K + + MVLD NLE+ E R + G
Sbjct: 245 LIHYL-KSTQKRTLSHINKINIYTFT--------EKMVLDISTRRNLELTETIRGKNKKG 295
Query: 671 TLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRL 730
+L L+ TA G R++R W+ PL N I R +AVA L+ + E +++L ++
Sbjct: 296 SLLWILDKTQTAMGGRMIRKWIEEPLLNIQNINRRLEAVATLKN-DILLRCELKESLKQI 354
Query: 731 PDMERLLARL-FASS 744
D+ERL ++ F S+
Sbjct: 355 YDLERLSGKIAFGSA 369
>sp|Q46CE2|MUTS_METBF DNA mismatch repair protein MutS OS=Methanosarcina barkeri (strain
Fusaro / DSM 804) GN=mutS PE=3 SV=1
Length = 900
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 174/658 (26%), Positives = 276/658 (41%), Gaps = 112/658 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM------KGEQ-PHCGFPER 385
Q++E K + D +IFF+MG FYE F DA AKEL++ GE+ P G P
Sbjct: 11 QYYEAKQAYPDTLIFFRMGDFYESFGEDAKTIAKELEITLTARGKDKSGERMPLAGIPYH 70
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ +L KGY+V + EQ E P +K KG +VKR + VVT GT + +
Sbjct: 71 AIDTYLPRLINKGYKVAICEQLEDP------KKAKG----IVKRGVVRVVTPGTAIDSSM 120
Query: 446 LSANPDAS--YLMALTESNQSPASQSTDRCF--GICVVDVATSRIILGQVMDDLDCSVLC 501
S DAS YLMA+ ++ + F G+ +D++T + Q D + L
Sbjct: 121 FS---DASNNYLMAVAGREIGKPGKNAENEFEIGVSFLDISTGEFLTTQFRDSENFEKLL 177
Query: 502 CLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNR 561
L+ +RP E I P+++ NP L+E A+T V E
Sbjct: 178 SELARMRPSECILPSSLYE------------NP------ALAERLRAQTIVQEFA----- 214
Query: 562 ITAESLNKADSNVANSQAEGDGL------TCLPGILSELISTGDSGSQVLSALGGTLFYL 615
+++ ++ G+ L L G+ E + V SA
Sbjct: 215 ----------PDISGAKEAGERLKNHFRVATLEGMGCENLDFA-----VYSAWAAL---- 255
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ T +R EL + + +M+LD+ L NLE+ +N R +LY
Sbjct: 256 --EYAQTTQMR----ELTHINTLRTYSNSEFMILDSVTLRNLEIVKNVRDEGDENSLYRI 309
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFA-LEFRKALSRLPDME 734
LNH T G R L+ WL +PL + I R DAV L +P + R LS + D+E
Sbjct: 310 LNHTKTPMGSRALKKWLLKPLLSVEKINYRLDAVEELTA--KPLLRYDLRNWLSDVRDIE 367
Query: 735 RLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTES 794
RL+ R+ NSN ++ ++ E + SL LEN ES
Sbjct: 368 RLVGRVVYG------NSNA------------RDLVALKKSLEALPPVRDSL---LENIES 406
Query: 795 RQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGG-VDMDYDSACKKVKEIE 853
L+ I GL A S L++ + D + + GG + Y++ ++K+I
Sbjct: 407 TILNDIAV---GL-ASFSELENLAEMIDRAIVDEPPISVREGGMIKSGYNAELDELKDIA 462
Query: 854 ASLTKHLKE-QRKLLGDTSITYVTIGKDL---YLLEVPESLRGSVPRDYELRSSKKGFFR 909
++ + + Q+K + I + +G + Y +EV + VP DY + + R
Sbjct: 463 SNSRQWIANFQQKERERSGIKSLKVGYNKIFGYYIEVTNANSSQVPEDYIRKQTMANAER 522
Query: 910 YWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMVAATAGLTLILLD 967
++TP +K+ + A +EK AL+ + I Q H++ Q A G +L D
Sbjct: 523 FFTPELKEKESLILTA-NEKAIALEYEIFTEILQTLSAHSRELQETAERIGTLDVLTD 579
>sp|Q0CPP9|MSH3_ASPTN DNA mismatch repair protein msh3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=msh3 PE=3 SV=1
Length = 1117
Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 149/670 (22%), Positives = 280/670 (41%), Gaps = 77/670 (11%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-- 379
L+ ++Q + K KHMDK++ ++G + F DA V AKEL + + G E P
Sbjct: 206 LTPMERQIIDMKRKHMDKILAVQVGYKFRFFGEDARVAAKELSIVCIPGKFRFDEHPSEA 265
Query: 380 -------CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREIC 432
P ++V++L G++V +V Q ET + +++ R++
Sbjct: 266 HLDRFASASIPVHKLHVHVKRLITAGHKVGIVRQIETAAL----KAAGDNRNAPFVRKLT 321
Query: 433 AVVTKGTLT---EG-----ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATS 484
V TKGT EG Y++ +TE+N GI V AT
Sbjct: 322 NVYTKGTYIDDMEGLEGPTAGAGTTAATGYMLCITETNAKGWGNDEKVHVGIVAVQPATG 381
Query: 485 RIILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAI--LRHTRNPLVNDLVPL 542
I+ D S + L L P E++ + LS +++ + L ++ + D V +
Sbjct: 382 DIVFDDFEDGFMRSEIETRLLHLAPCELLIVGD-LSKASDKLVQHLAGSKMNVFGDKVRV 440
Query: 543 SEFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGS 602
++T E + + A+ + A+++ ++QA +L ++++ + S
Sbjct: 441 ERTTKSKTAAAEAHSHVSSFYADKVKSANAS-DDTQASN--------LLQKVLNLPEQVS 491
Query: 603 QVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFEN 662
LS++ + ++ + L E + K+ F + + +M+L+ L +LE+++N
Sbjct: 492 ICLSSM---IKHMTEYGL-EHVFDLTKY-------FQHFSSRSHMLLNGNTLMSLEIYQN 540
Query: 663 SRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALE 722
S G+L+ L+ T FG+RLLR W+ RPL + + ER +A+ L+ + + +E
Sbjct: 541 QTDHSSRGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSKLEERVNAIEELKSMEKVAMVE 600
Query: 723 -FRKALSRLP-DMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQ 780
+ L + D+E++L R++ Y + +L L G + +
Sbjct: 601 RLKGVLGKAKCDLEKILIRIY---------------YGRCTRPEL------LTGLQTLQM 639
Query: 781 ACSSLGAILENTESRQLHHILTPG-KGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVD 839
G + +S IL LP I+ + F + + A N + +
Sbjct: 640 IAQEFGDVKSPEDSGFTTPILNEAIASLPTILEDVLSFLNKINLHAARNDDKYEFFREAE 699
Query: 840 MDYDSACKK--VKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLLEVP--ESLRGSVP 895
D + K + +E L ++ K+LG + I YVT+ YL+EV S VP
Sbjct: 700 ETEDISEHKLGIASVEHELREYQSVAGKILGRSKIQYVTVAGIDYLIEVENNSSYLKRVP 759
Query: 896 RDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQFCEHHNKWRQMV 955
+ S K R+ +P + KLL + Q + +A L+ + ++ +R V
Sbjct: 760 ASWVKISGTKKLSRFHSPEVIKLLRQRDQHKEALAAACDHAYASLLAEIAANYQPFRDCV 819
Query: 956 AATAGLTLIL 965
+ A + +L
Sbjct: 820 QSLATIDCLL 829
>sp|Q3YSJ8|MUTS_EHRCJ DNA mismatch repair protein MutS OS=Ehrlichia canis (strain Jake)
GN=mutS PE=3 SV=1
Length = 804
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/420 (27%), Positives = 195/420 (46%), Gaps = 70/420 (16%)
Query: 325 RNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFP 383
R ++ +Q+ K+++ + ++F+++G FYELF DA +K L++ K G P CG P
Sbjct: 5 RKITPIMQQYMMLKNQYKECLLFYRLGDFYELFFDDAIETSKVLNIVLTKKGNVPMCGVP 64
Query: 384 ERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEG 443
+ + +L + GY+V + EQ ETPE+ K++G K +VKR++ +VT GT+ E
Sbjct: 65 FHSSESYLNRLVKLGYKVAICEQLETPEE----AKKRGYK-ALVKRDVVRIVTPGTILED 119
Query: 444 ELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
LL A + +YL + N + A + G+ + R I D D
Sbjct: 120 SLLEAKEN-NYLCCIVNVNDNYAIAWLELSTGLFHYNTTDLRKI------DSD------- 165
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L + P E++ ++ + + L+ + + S F+D + + ++Y
Sbjct: 166 LLRINPKEVLISDKLVELDLIYSTLKKYKFSITQ---YSSSFFDTSRSYNTLCSVY---- 218
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK---KSFL 620
G++ L G+ GD + ++ G L Y+K K L
Sbjct: 219 -------------------GISTLKGL-------GDLKDEEIAVCGSLLEYVKATQKGNL 252
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+ L F K +GD + +M +DA AL NLE+F N++SGD G+L + +++ +
Sbjct: 253 PK--LEFPK-------AYGD---RDFMFIDAAALRNLELF-NTQSGDLEGSLISSIDYTI 299
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
TA G RLL+ L+ PL S I R D V N+ R+ L + D+ER+L R+
Sbjct: 300 TACGGRLLKRCLSAPLACSYAINRRLDIVEFFVN-NKVLYKNVRETLRGIADIERILTRV 358
>sp|A6TR79|MUTS_ALKMQ DNA mismatch repair protein MutS OS=Alkaliphilus metalliredigens
(strain QYMF) GN=mutS PE=3 SV=1
Length = 880
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 186/425 (43%), Gaps = 70/425 (16%)
Query: 324 LRNLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQ 377
+ NL+ +Q+++ K ++ D ++FF+MG FYELF DA ++EL++ ++
Sbjct: 1 MANLTPMMQQYFDIKKQYPDSLLFFRMGDFYELFFQDAETASRELEITLTGRSCGLEERA 60
Query: 378 PHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTK 437
P CG P + +++L GY+V + EQ E Q KG +VKR++ V+T
Sbjct: 61 PMCGVPHHAATGYIDRLVSNGYKVAICEQIEDVSQ------AKG----IVKRDVVRVITP 110
Query: 438 GTLTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDC 497
GTL + +LL + +YLM++ S FG+ VD++T + ++ +++
Sbjct: 111 GTLIDTQLLDDKKN-NYLMSVFGSRTG---------FGLAYVDISTGDLFATEIKENIHP 160
Query: 498 SVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVL--EI 555
+L + + P E++ + + E + + E W E T +I
Sbjct: 161 QMLIDEMGRVLPQELLY---FIETDKEDPTIISMIKKRFDFYTNGYEEWSYEDTFALNQI 217
Query: 556 KNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYL 615
K+ +N ++ E L S++ ++A G YL
Sbjct: 218 KDHFNVVSLEGLGFHPSHLG-----------------------------INAAGALFHYL 248
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
K + K L + + M LD +NLE+ E RS G+L
Sbjct: 249 KTT---------QKRALEHINHINVYSIHEKMTLDINTRKNLELTETIRSKSKKGSLLGV 299
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMER 735
L+ TA G R+LR W+ PL + +I +R +AV L+ E +++L ++ D+ER
Sbjct: 300 LDKTSTAMGGRMLRKWIEAPLIDPVIINKRLEAVQLLKE-QIELRQELKESLKKIYDLER 358
Query: 736 LLARL 740
L ++
Sbjct: 359 LAGKI 363
>sp|Q68X73|MUTS_RICTY DNA mismatch repair protein MutS OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=mutS PE=3 SV=1
Length = 891
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 190/430 (44%), Gaps = 69/430 (16%)
Query: 328 SEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK------GEQPHCG 381
++ +Q+ + K H+D ++ F+MG FYELF DA + + L + K E P CG
Sbjct: 21 TKMMQQYLDIKFAHLDCLLLFRMGDFYELFYEDAILASNILGIALTKRGKNCEEEIPMCG 80
Query: 382 FPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLT 441
P + KL + Y+V + +Q ETPE+ K++G VV R++ ++T GT+
Sbjct: 81 VPYHALEHYLTKLITENYKVAICDQLETPEE----AKKRGGYKAVVTRDVTRIITPGTII 136
Query: 442 EGELLSANPDASYLMALTES-NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVL 500
E L+SA + +YL +L + N+ AS IC VD++TS+I + V + + +
Sbjct: 137 EENLISA-AEPNYLTSLVMTKNKKTAS--------ICYVDLSTSKIFIVNVPE----TEI 183
Query: 501 CCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYN 560
L+ L+ EI+ N+ S +IL+ ++ T Y
Sbjct: 184 LNELARLKSREILLSENLKSSNLADSILKQ---------------FNCRIT-------YQ 221
Query: 561 RITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFL 620
+ ++NK + + + D + GI G+ S + A+G L YL
Sbjct: 222 VDSFFAINKCEKIILDFYKIRD----IKGI-------GEISSSQICAIGSILEYL----- 265
Query: 621 DETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCV 680
+L + LP + YM +D NLE+ N + G+ G++ LNH V
Sbjct: 266 --SLTQKQNIPNLPIPKIINF--HSYMTIDFSTRRNLEIVTNIQ-GNLHGSVLNTLNHTV 320
Query: 681 TAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
T G RLL +L+ PL N I R + N R+ L D+ER L R+
Sbjct: 321 TKQGGRLLYHFLSSPLTNIAKINRRLNITEFFYS-NLGIVTRIRELLKNTSDIERCLTRI 379
Query: 741 FASSEANGRN 750
+ ++GR+
Sbjct: 380 -TMNRSSGRD 388
>sp|A1CDD4|MSH3_ASPCL DNA mismatch repair protein msh3 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=msh3 PE=3 SV=1
Length = 1130
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 159/684 (23%), Positives = 279/684 (40%), Gaps = 112/684 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH------ 379
+KQ E K KHMD V+ ++G Y F DA + AKEL + + G E P
Sbjct: 222 EKQVIEIKRKHMDTVLVIEVGYKYRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAHLDR 281
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P ++V++L GY+V VV Q ET + +++ R++ + T
Sbjct: 282 FASASIPVHRLHVHVKRLVAAGYKVGVVRQLETAA----LKAAGDNRNAPFSRKLTNLYT 337
Query: 437 KGTL----------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
KGT T A+P YL+ +TE+N GI V T I
Sbjct: 338 KGTYVDDVEGLEGPTPAASGGASPATGYLLCITETNAKGWGNDERVHVGIVAVQPNTGDI 397
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLVPLS 543
I D S + L + P E++ LS TE+ +++H +N D V +
Sbjct: 398 IYDDFEDGFMRSEVETRLLHIAPCELVIVGE-LSKATEK-LVQHLSGSKLNTFGDKVRVE 455
Query: 544 EFWDAETTVLE----IKNIY-NRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTG 598
+T V E + N Y +++ A S++ D+ +N +L ++++
Sbjct: 456 RVGKKKTAVAESHSHVANFYASKLKAASVD--DTQTSN-------------LLQKVLTLP 500
Query: 599 DSGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLE 658
+ QV L + ++ + L E + + K+ F + + +M+L+A L +LE
Sbjct: 501 E---QVTVCLSAMIEHMTEYGL-EHIFQLTKY-------FQHFSSRSHMLLNANTLVSLE 549
Query: 659 VFENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQP 718
+++N + G+L+ L+ T FG+RLLR W+ RPL + + ER +AV L+ +
Sbjct: 550 IYQNQTDHSTKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKSRLEERVNAVEELKNPEKT 609
Query: 719 FALE-FRKALSRL-PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCE 776
+E ++ L R+ D+E+ L R++ K E ++ L +
Sbjct: 610 VQVERLKRLLGRIKSDLEKNLIRIY------------------YGKCTRPELLTVLQTLQ 651
Query: 777 LMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHG 836
+ Q + + + +N +P G A+ S+ KD ++ +I H
Sbjct: 652 TIAQEYADVKSPEDNG-------FASPVLG-EAVASLPTILKDVVAFL-----NKINMHA 698
Query: 837 GVDMDYDSACKKVKEIE---------ASLTKHLKEQRKLLGDT----SITYVTIGKDLYL 883
D ++ +E + AS+ L+E R + + YVT YL
Sbjct: 699 ARSDDKYEFFRESEETDEISEHKLGIASVEHELEEHRAVAAGILKWPKVVYVTSSGIEYL 758
Query: 884 LEVPESLRG--SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLI 941
+EV + VP + S K R+ TP + +LL + Q + +A L+
Sbjct: 759 IEVENTSNAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDKAFAALL 818
Query: 942 GQFCEHHNKWRQMVAATAGLTLIL 965
+ ++ +R V A A L +L
Sbjct: 819 AEIAVNYQLFRDCVQALATLDCLL 842
>sp|Q4UM86|MUTS_RICFE DNA mismatch repair protein MutS OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=mutS PE=3 SV=1
Length = 886
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 187/427 (43%), Gaps = 69/427 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK----GEQ--PHCGFPE 384
+Q+ + K H+D ++ F+MG FYE+F DA + + L + K GE+ CG P
Sbjct: 19 MQQYLDIKFAHLDCLLLFRMGDFYEMFYEDAILASNVLGIALTKRGKNGEEEIAMCGVPY 78
Query: 385 RNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGE 444
+ KL + Y+V + +Q ETPE+ K +G VV R++ ++T GT+ E
Sbjct: 79 HALENYLTKLIEENYKVAICDQLETPEE----AKNRGGYKAVVTRDVTRIITPGTIIEEN 134
Query: 445 LLSANPDASYLMALTES-NQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCL 503
L+ A+ + +YL +L + N+ AS +C VD++TS I + V + + +
Sbjct: 135 LI-ASAEPNYLASLVITKNKETAS--------LCYVDLSTSEIFVVNVPE----AEILNE 181
Query: 504 LSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRIT 563
L+ L+P EI+ N+ S +I + L + Y +
Sbjct: 182 LARLKPREILLSENLRSSNLADSIFKQ----------------------LNFRITYQVDS 219
Query: 564 AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDET 623
++NK + + + D + GI G+ S + A+G L YL +
Sbjct: 220 FFAINKCEKIILDFYKMKD----IKGI-------GEISSSQICAIGSILEYL-------S 261
Query: 624 LLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAF 683
L + LP + YM +D NLE+ NS+ G G+L LNH VT
Sbjct: 262 LTQKQNIPHLPIPRIINF--HSYMTIDFATRRNLEIVTNSQ-GTLKGSLLNTLNHTVTKQ 318
Query: 684 GKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFAS 743
G RLL +L+ PL N I R + N R+ L + D+ER L R+
Sbjct: 319 GGRLLYNFLSSPLTNIAKINHRLNITEFFYS-NLEIVKRIRELLKKTSDIERCLTRI-TM 376
Query: 744 SEANGRN 750
+ ++GR+
Sbjct: 377 NRSSGRD 383
>sp|Q7SD11|MSH3_NEUCR DNA mismatch repair protein msh-3 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=msh-3 PE=3 SV=1
Length = 1145
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 162/682 (23%), Positives = 266/682 (39%), Gaps = 119/682 (17%)
Query: 333 QWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH-------- 379
Q+ E K KHMD ++ ++G + F DA + A+EL + + G E P
Sbjct: 192 QFLEIKRKHMDTLLIVEVGYKFRFFGEDARIAARELSIVCIPGKFRYDEHPSEAHLDRFA 251
Query: 380 -CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKG 438
P ++ ++L GY+V VV Q ET +K +++ R++ V TKG
Sbjct: 252 SASIPVHRLPVHAKRLVAAGYKVGVVRQIETAAL----KKAGDNRNAPFVRKLTNVYTKG 307
Query: 439 TLTE--GEL-----LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV 491
T + GEL + YL+ LTE+ GI V AT II +
Sbjct: 308 TYIDETGELDQPGETTGASSGGYLLCLTETPAKGMGTDEKVNVGIIAVQPATGDIIYDEF 367
Query: 492 MDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN--------DLVPLS 543
D + L + P E + + LS T++ +++H N + VP S
Sbjct: 368 EDGFMRREIETRLLHISPCEFLIVGD-LSKATDK-LIQHLSGSSTNVFGDKSRVERVPKS 425
Query: 544 EFWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQ 603
+ AE+ Y+ +T KA + S A + + LP
Sbjct: 426 KTMAAES--------YSNVTDFYAGKAKDSDERSAALLNKVLKLP-------------EA 464
Query: 604 VLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENS 663
V+ L + +L + L + + K+ F + + +M+++ LE+LEV+ N+
Sbjct: 465 VMICLSAMITHLTEYGL-QHIFDLTKY-------FQSFSTRQHMLINGTTLESLEVYRNA 516
Query: 664 RSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEF 723
G+L L+ T FG+RLLR W+ RPL + + ER AV L +N +
Sbjct: 517 TDHSEKGSLLWALDKTHTRFGQRLLRKWIGRPLLDQQRLEERVSAVEEL--LNNQSTAKV 574
Query: 724 RKALSRL----PDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMD 779
K ++ L D+ER L R++ K E +S L + +
Sbjct: 575 DKLVNMLKSIKADLERSLIRIY------------------YGKCTRPELLSTLQTLQKIS 616
Query: 780 QACSSLGAILENTESRQL--HHILTPGKGLPAIVSIL---------KHFKDAFDWVEANN 828
+ + + + S L I+T P + + L K K AF ++E +
Sbjct: 617 FEYARVKSPADTGFSSTLLTSAIMTLPSISPMVTAHLSKINAEAARKDDKYAF-FLEQHE 675
Query: 829 SGRIIPH----GGVDMDYDSACKKVKEIEASLTKHLKEQRKLLG-DTSITYVTIGKDLYL 883
+ I H V+ D D +H E K LG + YVT+ YL
Sbjct: 676 TEDISEHKLGIAAVEQDLD--------------EHRSEAAKDLGKKVPVNYVTVAGIEYL 721
Query: 884 LEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIGQ 943
+EVP + VP + S K R+ TP + +L+ E Q + SA L+ Q
Sbjct: 722 IEVPNTDLKRVPASWAKISGTKKVSRFHTPTVLRLIAERDQHKESLASACDQAFSDLLSQ 781
Query: 944 FCEHHNKWRQMVAATAGLTLIL 965
+ R V++ + L +L
Sbjct: 782 IAGEYQPLRDAVSSLSTLDCLL 803
>sp|Q5FHE8|MUTS_EHRRG DNA mismatch repair protein MutS OS=Ehrlichia ruminantium (strain
Gardel) GN=mutS PE=3 SV=1
Length = 804
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 186/412 (45%), Gaps = 66/412 (16%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPERNFSM 389
+Q+ K ++ + ++F+++G FYELF DA +K L++ K G P CG P +
Sbjct: 11 MQQYVTLKQQYKEYLLFYRLGDFYELFFDDAIKTSKILNIVLTKKGNVPMCGVPFHSSET 70
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ KL + GY++ + EQ ET E+ +++G K +VKR++ +VT GT+ E LL A
Sbjct: 71 YLNKLVKLGYKIAICEQLETSEE----ARKRGYKS-LVKRDVVRIVTPGTIVEDSLLEA- 124
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLSELRP 509
+++YL + S A + G+ + + LD +L + P
Sbjct: 125 KESNYLACIVRIKDSCAIAWLELSTGLFCYHMTH--------ISKLDSDLL-----RIGP 171
Query: 510 VEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLNK 569
E++ ++L E +I++ R + S F+D + N+Y
Sbjct: 172 KELLVADDLLEIEAVYSIIKKYRFSITQ---YSSSFFDENRAYNTLCNVY---------- 218
Query: 570 ADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKSFLDETLLRFAK 629
G++ L G+ GD +S G L Y+ + +
Sbjct: 219 -------------GVSTLKGL-------GDLKGVEISVCGSLLEYVIAT----------Q 248
Query: 630 FELLPCSGF-GDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGKRLL 688
LP GF + +M +DA AL NLE+F +++SG+ G+L A ++ VTA G RLL
Sbjct: 249 KGSLPKLGFPKAYVQSDFMFIDAAALRNLELF-STQSGELEGSLIASIDFTVTASGGRLL 307
Query: 689 RTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARL 740
+ L+ PL ++ I R AV NQ R+ L + D+ER+L R+
Sbjct: 308 KRCLSAPLASADAINRRLSAVEFFVN-NQNLYKSVRQVLRGIADIERILTRV 358
>sp|Q2RJG2|MUTS_MOOTA DNA mismatch repair protein MutS OS=Moorella thermoacetica (strain
ATCC 39073) GN=mutS PE=3 SV=1
Length = 863
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 186/436 (42%), Gaps = 90/436 (20%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM----KGEQPHCGF 382
L+ Q+ + KS++ D ++FF++G FYE+F DA V A+ELDL K P CG
Sbjct: 7 LTPMMAQYRQIKSQYPDCILFFRLGDFYEMFYEDAEVAARELDLVLTTRGGKEAAPMCGV 66
Query: 383 PERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTE 442
P + +L KGY+V + EQ E P R+ KG +V+RE+ VVT GT+T+
Sbjct: 67 PFHAADSYLARLVGKGYKVAICEQMEDP------RQAKG----LVRREVIRVVTPGTITD 116
Query: 443 GELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCC 502
+ L+ + +YL A+ N C+G+ D +T + D L
Sbjct: 117 EKALTPGGN-NYLAAIVRYNG---------CWGLAWADASTGEFLFTTCPDQ---ETLVD 163
Query: 503 LLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRI 562
L L P E + P + +T + + IY R
Sbjct: 164 ELVRLMPSEYLLPGELAR----------------------------DTALKRLLQIYTRG 195
Query: 563 TAESLNKADSNVANSQAEGD--GLTCLPGILSEL-ISTGDSGSQVLSALGGT----LFYL 615
A + A Q+ D G L G+ EL + G + + +LS L T L +L
Sbjct: 196 VITGWQVASNPEAARQSLEDHFGHEALAGV--ELPAAAGLAAAMILSFLVATQHNSLAHL 253
Query: 616 KKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQ 675
+ T R F D A + NLE+ R G+L
Sbjct: 254 EAPAAAATTSRM----------FLDQATR----------RNLELVTAGREQKREGSLLWV 293
Query: 676 LNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFAL--EFRKALSRLPDM 733
L+ +TA G R LR WL +PL ++G I+ERQ+AVA L + F L E R+ L + D+
Sbjct: 294 LDKTLTAMGARTLRRWLDQPLVDAGAIKERQEAVAEL---VEGFILRQELRERLQVVRDL 350
Query: 734 ERLLARLFASSEANGR 749
ERL R+ A A GR
Sbjct: 351 ERLAGRV-AYGTAGGR 365
>sp|P61670|MUTS_RHOPA DNA mismatch repair protein MutS OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=mutS PE=3 SV=1
Length = 907
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 186/422 (44%), Gaps = 71/422 (16%)
Query: 327 LSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDL------QYMKGEQPHC 380
+S +Q+ E K+ + ++F++MG FYELF DA + ++ L + +++ + P C
Sbjct: 23 MSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHLGADIPMC 82
Query: 381 GFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTL 440
G P + +L G+RV V EQTE P R+ VV+R++ ++T GTL
Sbjct: 83 GVPVERSDDYLHRLIALGHRVAVCEQTEDPAAARARK-------SVVRRDVVRLITPGTL 135
Query: 441 TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV- 499
TE LL A + +YL+A+ + S DR G+ +D++T + + CS
Sbjct: 136 TEDTLLDARAN-NYLLAIARAR---GSAGADR-IGLAWIDISTGEFCVTE------CSTA 184
Query: 500 -LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNI 558
L L+ + P E I P + L +TE A P + +L ++ +++
Sbjct: 185 ELAATLARINPNEAIVP-DALYSDTELA-------PTLRELAAVTPL---------TRDV 227
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
++ TAE VA DGL LS L +T A + Y+ ++
Sbjct: 228 FDSATAERRLCDYFAVATM----DGLAA----LSRLEAT---------AAAACVTYVDRT 270
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
L + P S A M +D NLE + +G+ G+L ++
Sbjct: 271 QLGKR---------PPLSPPAREATGSTMAIDPATRANLE-LTRTLAGERRGSLLDAIDC 320
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLA 738
VTA G RLL LA PL ++ I R DAV V+ + R +L PDM R LA
Sbjct: 321 TVTAAGSRLLAQRLAAPLTDAATIARRLDAVEAF-AVDSGLREQIRSSLRAAPDMARALA 379
Query: 739 RL 740
RL
Sbjct: 380 RL 381
>sp|A7TTQ1|MSH3_VANPO DNA mismatch repair protein MSH3 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=MSH3 PE=3 SV=1
Length = 1023
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 156/631 (24%), Positives = 265/631 (41%), Gaps = 120/631 (19%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG---------------E 376
+Q + K HMDK++ ++G Y+ F DA + +K L + + G +
Sbjct: 140 QQVKDLKLLHMDKILVIRVGYKYKCFAQDAEIVSKILHIMLIPGKLTIDESNPQDSNYRQ 199
Query: 377 QPHCGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
+C FP+ +++E L +V VVEQ+ET + SK+ V +R+I V T
Sbjct: 200 FAYCSFPDIRLKVHLETLVHNNLKVAVVEQSETSAIK--KNSNASSKNSVFERKISGVYT 257
Query: 437 KGTLTEGELLSAN-------PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILG 489
K T S+N ++ +++ +E ++ +S F + V++ + II
Sbjct: 258 KATFGINSAFSSNRKNVLGQYNSIWIINFSEIDKINSS------FFMISVNLNSGEII-- 309
Query: 490 QVMDDLDCSV-----LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSE 544
D +CS L + L P+E++ + + PE + L + N + L E
Sbjct: 310 --YDTFECSTTSIENLETRIKYLNPIEVLTVSAL--PEKVKLRLHGS-----NSTILLKE 360
Query: 545 FWDAETTVLEIKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQV 604
D + ++E +NK+ + G + S
Sbjct: 361 KEDIDKEIME-----------EINKS-------------------------TKGLNLSAE 384
Query: 605 LSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSR 664
L L L+ + +E LL L + A K +MVL+A A+E+L +F
Sbjct: 385 LFELVPVLYKYLTEYNNEELL-------LISENYKPFASKKHMVLNAAAIESLGIF--GE 435
Query: 665 SGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAV-AGLRGVNQPFALEF 723
G G+L+ L+H T+FG R LR W+ PL + I +R DAV + V+ F
Sbjct: 436 EG-GKGSLFWLLDHTRTSFGSRKLREWILHPLLDKKEIEDRLDAVDCIIHEVSNIFFESL 494
Query: 724 RKALSRLPDMERLLARLFASSEANGRNSNKVVLYEDAAKKQLQEFIS--ALHGCELMDQA 781
K L+ +PD+ R + R+ A G S K + Y KQ++ F LH L Q
Sbjct: 495 NKMLTNVPDLLRTINRI-----AYGTTSRKEIYY---FLKQMKSFSDHFQLHSNYLNSQV 546
Query: 782 CSSLGAILENTESRQLHHILTP-GKGLPAI-VSILKHFKDAFDWVEANNSGRIIPHGGVD 839
S+ G I + S L ++LT GL I + + + +E + ++ ++
Sbjct: 547 VSNDGRI--HKSSALLTNLLTEITSGLKEINIENILSMINVSSVMEKDTYKQVSEFFNLN 604
Query: 840 MDYDSACKKVK------EIEASLTKHLKEQRKLLGDTSITYVTIGKDL--YLLEVPESLR 891
YD A + +K E++ L + L RK+L + Y KD YL+EV +
Sbjct: 605 Y-YDHAEEIIKIQGNINEVKNELAEELSSIRKILKRPHLNY----KDEMDYLIEVRNTQT 659
Query: 892 GSVPRDYELRSSKKGFFRYWTPNIKKLLGEL 922
+P D+ + + K RY TP +KL+ +L
Sbjct: 660 KGLPSDWIVVNRTKMISRYHTPTSRKLIEKL 690
>sp|A1AMW9|MUTS_PELPD DNA mismatch repair protein MutS OS=Pelobacter propionicus (strain
DSM 2379) GN=mutS PE=3 SV=1
Length = 870
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 164/630 (26%), Positives = 254/630 (40%), Gaps = 113/630 (17%)
Query: 332 KQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYM---KG---EQPHCGFPER 385
+Q+ E KS + D V+FF+MG FYE+F DA + ++ LD+ KG E P CG P
Sbjct: 9 RQYLEIKSGYPDAVLFFRMGDFYEMFLDDALLASRILDITLTSRNKGSGDEIPFCGVPYH 68
Query: 386 NFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGEL 445
+ + + KL G++V + EQ E P+Q KG +V+RE+ V+T G L E E
Sbjct: 69 SVTPYITKLIENGHKVAICEQVEDPKQ------TKG----IVRREVVRVITPGLLIETEN 118
Query: 446 LSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSVLCCLLS 505
LS + D +YL+AL Q + +G+ +D++T
Sbjct: 119 LSPD-DNNYLLAL--------HQGAEEQWGVAWLDLST---------------------G 148
Query: 506 ELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEF------WDAETTVLEIKN-I 558
E R E+ P + L+ A+ + L+ D V L EF + A+ V +
Sbjct: 149 EFRVTELAGPGSALA----EAVCINPAEVLLADGVRLEEFPADLKEYLAQKIVSRAPAWV 204
Query: 559 YNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLKKS 618
Y R SL A+ G L G+ S L+ A G L+YL+++
Sbjct: 205 YERDYTSSLICDQFGAASPDVLG-----LEGLPSGLL-----------AAGAALYYLREN 248
Query: 619 FLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNH 678
K + + ++ LD NLE+ + G SG+L L+
Sbjct: 249 ---------RKSAIPHIRDIRVYQRSEHLALDPATRRNLEITASMAEGKKSGSLLGCLDR 299
Query: 679 CVTAFGKRLLRTWLARPLYNSGLIRERQDAVAG-LRGVNQPFALEFRKALSRLPDMERLL 737
VTA G R L+ WL PL IR R DAV L G E + + D+ERL
Sbjct: 300 TVTAMGARRLKQWLGYPLVGLEPIRSRLDAVEELLEGATTRD--ELAAQMKGIADLERLN 357
Query: 738 ARLFASSEANGRNSNKVVLYEDAAKKQLQEFISALHGCELMDQACSSLGAILENTESRQL 797
R+ +S A+GR+ + ALH L A ++ QL
Sbjct: 358 GRIGMAS-ASGRD------------------LRALHDSLQRIPPLRELMATMQTALLCQL 398
Query: 798 HHILTPGKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEASLT 857
+ P + + +V F E G I P G + + D E + +
Sbjct: 399 TKEIDPLEDILDLVGRGIVENPPFSLREG---GIIAP--GYNPELDELRSISHEGKGFIA 453
Query: 858 KHLKEQRKLLGDTSITYVTIGKDLYLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIK- 916
+ ++R G +S+ Y +E+ +S SVP DY R + RY T +K
Sbjct: 454 RLEAQERARTGISSLKIRFNKVFGYSIEITKSNLASVPADYIRRQTLANAERYITEELKN 513
Query: 917 ---KLLGELSQAESEKESALKSILQRLIGQ 943
K+LG + + S + I +R+ G+
Sbjct: 514 YEEKVLGAEDRIHELEYSLFQEIRERVAGE 543
>sp|Q2GG13|MUTS_EHRCR DNA mismatch repair protein MutS OS=Ehrlichia chaffeensis (strain
Arkansas) GN=mutS PE=3 SV=1
Length = 804
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 148/626 (23%), Positives = 269/626 (42%), Gaps = 113/626 (18%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMK-GEQPHCGFPERNFSM 389
+Q+ KS++ + ++F+++G FYELF DA ++ L++ K G P CG P +
Sbjct: 11 MQQYMMLKSQYKEYLLFYRLGDFYELFFDDAIETSRILNIVLTKKGNVPMCGVPFHSSES 70
Query: 390 NVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLSAN 449
+ +L + GY++ + EQ ET E+ K++G K +VKR++ +VT GT+ E LL A
Sbjct: 71 YLNRLVKLGYKIAICEQLETSEE----AKKRGYK-ALVKRDVVRIVTPGTILEDSLLEAK 125
Query: 450 PDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQV-MDDLDCSVLCCLLSELR 508
E+N + D + I ++++T + LD L +
Sbjct: 126 ----------ENNYLSCIVNVDHNYAIAWLELSTGLFYYHTTELHKLDSD-----LFRIN 170
Query: 509 PVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIYNRITAESLN 568
P E++ ++ ++ +ILR + + F+D + + N+Y
Sbjct: 171 PKEVLISDKLVELDSIYSILRKYKFSVTQ---YSGSFFDVSRSYNTLCNVY--------- 218
Query: 569 KADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGTLFYLK---KSFLDETLL 625
G++ L G+ GD ++ ++ G L Y+K K L + L
Sbjct: 219 --------------GISTLKGL-------GDLKNEEIAVCGSLLEYVKATQKGNLPQ--L 255
Query: 626 RFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGTLYAQLNHCVTAFGK 685
F K +K +M +DA AL NLE+F ++SGD G+L + +++ +TA G
Sbjct: 256 EFPK----------AYSKGDFMFIDAAALRNLELF-CTQSGDLEGSLISSIDYTITACGG 304
Query: 686 RLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLPDMERLLARLFASSE 745
RLL+ L+ PL S I R D V ++ R+ L + D+ER+L R+
Sbjct: 305 RLLKRCLSAPLACSHAINRRLDIVEFFVN-DRTLCRGVRETLRGIADIERILTRI----- 358
Query: 746 ANGRNSNKVVLYEDAAKKQLQEFISALHGCE--LMDQACSSLGAILENTESRQLHHILTP 803
G+ S K + ++ + LH + ++ CS LG + + L +L P
Sbjct: 359 KVGKCSPKDLYALKLTLDKIFVLLDLLHKFDSSVVGDFCSRLGK--YDDLCKTLDDVLIP 416
Query: 804 GKGLPAIVSILKHFKDAFDWVEANNSGRIIPHGGVDMDYDSACKKVKEIEA---SLTKHL 860
NN + G ++ DYD+ + I++ L + L
Sbjct: 417 -----------------------NNVNNVKDGGFINPDYDAQLSEYIYIQSYSNDLIQEL 453
Query: 861 KEQRKLLGDTSITYVTIGKDL-YLLEVPESLRGSVPRDYELRSSKKGFFRYWTPNIKKLL 919
+++ + + + + L Y +EV S S +D+ R + RY T +K L
Sbjct: 454 RDKYRNITNIQSLKILYNNILGYYVEVSSSYLIS-DKDFIHRQTLANSIRYTTSELKAL- 511
Query: 920 GELSQAESEKESALKSILQRLIGQFC 945
S+ S +++A+ ++ ++ GQ C
Sbjct: 512 --ESKIISARDAAI-NLEVKIFGQLC 534
>sp|A1DCB2|MSH3_NEOFI DNA mismatch repair protein msh3 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=msh3
PE=3 SV=1
Length = 1117
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 161/683 (23%), Positives = 271/683 (39%), Gaps = 109/683 (15%)
Query: 331 QKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQYMKG-----EQPH------ 379
+KQ E K KHMD V+ ++G + F DA + AKEL + + G E P
Sbjct: 208 EKQVIEIKRKHMDTVLVIEVGYKFRFFGEDARIAAKELSIVCIPGKMRFDEHPSEAHLDR 267
Query: 380 ---CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVT 436
P ++V++L GY+V VV Q ET + +++ R++ + T
Sbjct: 268 FASASIPVHRLHVHVKRLVSAGYKVGVVRQLETAAL----KAVGDNRNAPFSRKLTNLYT 323
Query: 437 KGTL----------TEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRI 486
KGT T A+P Y++ +TE+N GI V T I
Sbjct: 324 KGTYVDDVEGLDGATPAASGGASPATGYMLCITETNAKGWGNDEKVHVGIVAVQPNTGDI 383
Query: 487 ILGQVMDDLDCSVLCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVN---DLVPLS 543
I D S + L + P E++ LS TE+ +++H +N D V +
Sbjct: 384 IYDDFEDGFMRSEVEARLLHIAPCELVIVGE-LSKATEK-LVQHLSGSKLNTFGDKVRVD 441
Query: 544 EFWDAETTVLE----IKNIYNRITAESLNKADSNVANSQAEGDGLTCLPGILSELISTGD 599
+T V E + N Y A AN+ + L +L +
Sbjct: 442 RVAKKKTAVAESHSHVANFY---------AAKLKAANTADDAPASNLLQKVL-------N 485
Query: 600 SGSQVLSALGGTLFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEV 659
QV L + +L + L E + K+ F + + +M+L+A L +LE+
Sbjct: 486 LPEQVTVCLSAMIEHLTEYGL-EHIFELTKY-------FQHFSSRSHMLLNANTLVSLEI 537
Query: 660 FENSRSGDSSGTLYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPF 719
++N + G+L+ L+ T FG+RLLR W+ RPL + + ER +AV L+ ++
Sbjct: 538 YQNQTDHSAKGSLFWTLDRTQTRFGQRLLRKWVGRPLLDKERLEERVNAVEELKSPDRTV 597
Query: 720 ALE-FRKALSRL-PDMERLLARLFASSEANGRNSNKVVL------------YEDAAKKQL 765
+E + L R+ D+E+ L R++ G+ + +L Y D +
Sbjct: 598 QVERLKILLGRIKSDLEKNLIRIY-----YGKCTRPELLTVLQTLQTIAQEYVDVKTPED 652
Query: 766 QEFISALHGCELMDQACSSLGAILENTESRQLHHILTPGKGLPAIVSILKHFKDAFDWV- 824
F S + G +A + + +ILE+ K L I D +++
Sbjct: 653 SGFTSPILG-----EAIARVPSILEDVV-----------KFLNKINMHAARNDDKYEFFR 696
Query: 825 EANNSGRIIPHGGVDMDYDSACKKVKEIEASLTKHLKEQRKLLGDTSITYVTIGKDLYLL 884
E+ + I H C + +E L +H +L +TYVT YL+
Sbjct: 697 ESEETEGISEH---------KC-GIASVEHELEEHRSVAAGILKWPKVTYVTSSGIEYLI 746
Query: 885 EVPESLRG--SVPRDYELRSSKKGFFRYWTPNIKKLLGELSQAESEKESALKSILQRLIG 942
EV + VP + S K R+ TP + +LL + Q + +A L+
Sbjct: 747 EVENTAAAIKRVPASWVKVSGTKKLSRFHTPEVIQLLRQRDQHKEALAAACDQAFAALLA 806
Query: 943 QFCEHHNKWRQMVAATAGLTLIL 965
+ ++ +R V + A L +L
Sbjct: 807 EIATNYQSFRDSVQSLATLDCLL 829
>sp|Q97I19|MUTS_CLOAB DNA mismatch repair protein MutS OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=mutS PE=3 SV=1
Length = 869
Score = 117 bits (293), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 186/433 (42%), Gaps = 92/433 (21%)
Query: 326 NLSEGQKQWWEFKSKHMDKVIFFKMGKFYELFEMDAHVGAKELDLQY------MKGEQPH 379
++S +Q+ K H D ++FF++G FYE+F DA V ++EL+L ++ P
Sbjct: 2 SISPMMQQYLSIKENHKDCILFFRVGDFYEMFFEDAEVASRELELVLTGKDCGLEKRAPM 61
Query: 380 CGFPERNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKGSKDKVVKREICAVVTKGT 439
CG P +++ KL KGY+V V EQ E P KG +VKR++ V+T GT
Sbjct: 62 CGVPHHAYAIYASKLVSKGYKVAVAEQLEDPSL------AKG----IVKRDVIKVLTPGT 111
Query: 440 LTEGELLSANPDASYLMALTESNQSPASQSTDRCFGICVVDVATSRIILGQVMDDLDCSV 499
T+ L + +Y+M+L D+ +C D++T L + +LD +
Sbjct: 112 YTDSSFLEDTKN-NYIMSLF---------IHDKVSAMCFADISTGEFNLTET--ELDFEI 159
Query: 500 LCCLLSELRPVEIIKPANMLSPETERAILRHTRNPLVNDLVPLSEFWDAETTVLEIKNIY 559
+ +S+ P E++ N+ + LV+ + E +D +Y
Sbjct: 160 ILNEISKFSPKELVLQENL-------------DDKLVD---KIRERFDV---------VY 194
Query: 560 NRIT--------AESLNKADSNVANSQAEGDGLTCLPGILSELISTGDSGSQVLSALGGT 611
NR + E+L SN A +C G++ +I T +
Sbjct: 195 NRFSNEYFKEHRNENLKAQFSNYAEVNMTEGLKSCANGLIKYIIDTQKTAL--------- 245
Query: 612 LFYLKKSFLDETLLRFAKFELLPCSGFGDMAKKPYMVLDAPALENLEVFENSRSGDSSGT 671
+ +DE K+E++ ++ +D + NLE+ E + G+
Sbjct: 246 ------THIDE----LQKYEIV-----------DFLSIDINSRRNLELTETLKDKSKKGS 284
Query: 672 LYAQLNHCVTAFGKRLLRTWLARPLYNSGLIRERQDAVAGLRGVNQPFALEFRKALSRLP 731
L L+ TA G R +R W+ RPL + I R DAV + N + + ++ L ++
Sbjct: 285 LLWVLDKTSTAMGGRQIRKWIERPLIDDEKINLRLDAVEEML-TNVSYNEDLKELLKQVY 343
Query: 732 DMERLLARLFASS 744
D+ERL ++ + S
Sbjct: 344 DIERLAGKISSKS 356
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 379,275,411
Number of Sequences: 539616
Number of extensions: 17580942
Number of successful extensions: 129728
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 1250
Number of HSP's that attempted gapping in prelim test: 98021
Number of HSP's gapped (non-prelim): 22498
length of query: 987
length of database: 191,569,459
effective HSP length: 127
effective length of query: 860
effective length of database: 123,038,227
effective search space: 105812875220
effective search space used: 105812875220
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)